Borrelia recurrentis A1 plasmid pl35, complete sequence.
type: Entry
definition: Borrelia recurrentis A1 plasmid pl35, complete sequence.
sequence version: NC_011255.1
sequence date: 2022-12-28
sequence: sequence
division: CON
label: NC_011255.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02603586
keyword: RefSeq
source: Borrelia recurrentis A1
organism: Borrelia recurrentis A1
taxonomy: Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borrelia.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP000997.1.\nDNA/Bacteria source is available for Michel Drancourt, Unite de\nRecherche sur les Maladies Infectieuses et Tropicales Emergentes,\nFaculte de Medecine, Marseille, France:\nmichel.drancourt@medecine.univ-mrs.fr\nPlasmid sequence lacks part of the telomeres.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/28/2022 01:15:04\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,230\nCDSs (total) :: 1,192\nGenes (coding) :: 1,099\nCDSs (with protein) :: 1,099\nGenes (RNA) :: 38\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 93\nCDSs (without protein) :: 93\nPseudo Genes (ambiguous residues) :: 0 of 93\nPseudo Genes (frameshifted) :: 59 of 93\nPseudo Genes (incomplete) :: 46 of 93\nPseudo Genes (internal stop) :: 32 of 93\nPseudo Genes (multiple problems) :: 35 of 93\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 35315
topology: linear
so has quality: SO_0000987
location: 1..35315
location: region:1-35315:1
RO_0002162: 412418

NC_011255
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02603586
type: BioSample
SIO_000068: biosample

1
title: The genome of Borrelia recurrentis, the agent of deadly louse-borne relapsing fever, is a degradated subset of tick-borne Borrelia duttonii
author: Lescot, M.
author: Audic, S.
author: Robert, C.
author: Nguyen, T.
author: Blanc, g.
author: Cutler, S.J.
author: Wincker, P.
author: Couloux, A.
author: Claverie, J.-M.
author: Raoult, D.
author: Drancourt, M.
journal: PLoS 4 (9), e1000185 (2008)
comments: Publication Status: Online-Only

2
title: Direct Submission
author: Audic, S.
journal: Submitted (17-MAR-2008) Institut de Biologie structurale et Microbiologie (IBSM), CNRS-Information Genomique et structurale, CNRS - UPR2589, Parc Scientifique de Luminy - 163 Avenue de Luminy - Case 934 FR-13288, Marseille cedex 09, France

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35315:1
position: 35315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-35315:1:source
so part of: sequence
organism: Borrelia recurrentis A1
mol type: genomic DNA
strain: A1
plasmid: pl35

412418
type: Taxonomy
SIO_000068: taxonomy

BRE_RS06255
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06255
so part of: sequence
location: 298..453
location: region:298-453:1
so has part: feature:298-453:1:exon
subclass of: SO_0000010

position:298:1
position: 298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453:1
position: 453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298-453:1:exon

BRE_RS06255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06255
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MLHYLDLFIILYNREKTNANFAAAVALKTMSKKGKFAAYKRSNILKKFHQH
SIO_010081: BRE_RS06255
subclass of: SO_0000673
so part of: BRE_RS06255
location: 298..453
location: region:298-453:1
so has part: feature:298-453:1:exon

WP_156768704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298-453:1:exon

BRE_RS05150
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05150
old locus tag: BRE_4001
so part of: sequence
location: complement(746..1408)
location: region:746-1408:-1
so has part: feature:746-1408:-1:exon
subclass of: SO_0000010

position:746:-1
position: 746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1408:-1
position: 1408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:746-1408:-1:exon

BRE_RS05150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05150
old locus tag: BRE_4001
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEDYYEEDDDDYDNEHENSYEEDDEDYEGYYDNYDKKESEEKYDKDEYDEEEERLDREYKLRSKNTKDSVKKAFKLAIQIEKDWGTVEFHKTKLNPIYGIRATSDEKQKSQRKLSKFNKNKLIESLTKFLNAIEESLNNADALTNIPEYPGSFAKDLQAKAKLDRLKTEIKTLISKVQKSNKTNYQSYEEIGSSIASSPKIKSELKQVLALLYGLTGAR
SIO_010081: BRE_RS05150
subclass of: SO_0000673
so part of: BRE_RS05150
location: complement(746..1408)
location: region:746-1408:-1
so has part: feature:746-1408:-1:exon

WP_041178243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:746-1408:-1:exon

BRE_RS05155
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05155
old locus tag: BRE_4002
so part of: sequence
location: complement(1496..1993)
location: region:1496-1993:-1
so has part: feature:1496-1993:-1:exon
subclass of: SO_0000010

position:1496:-1
position: 1496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1993:-1
position: 1993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1496-1993:-1:exon

BRE_RS05155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05155
old locus tag: BRE_4002
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSKNKYLALGLLLSFINCDLFMNDEIKEKSLGLFDKVHSVLDASAKSISNNKNGKFSQDVVSGDITSGLQNDVQKDIQVALSSTTFETGEAKIQKQQDVESENSITKVSKVYSNVINGLTGGKPLRGTEKEVNYPNVDDGEATSVEIHHNSYLNGFGSTSSSSI
SIO_010081: BRE_RS05155
subclass of: SO_0000673
so part of: BRE_RS05155
location: complement(1496..1993)
location: region:1496-1993:-1
so has part: feature:1496-1993:-1:exon

WP_012539609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1496-1993:-1:exon

BRE_RS05160
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05160
old locus tag: BRE_4003
so part of: sequence
location: complement(3385..4425)
location: region:3385-4425:-1
so has part: feature:3385-4425:-1:exon
subclass of: SO_0000010

position:3385:-1
position: 3385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4425:-1
position: 4425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3385-4425:-1:exon

BRE_RS05160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05160
old locus tag: BRE_4003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539605.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKKGIKGEMINIVMIMCLMVVMGCNSGGVKGEEGKGTQGIGGLGEVISHLREGFLEVFVSFGNILKDTFGLTSNTTKKEVGERLGKIGEAVEIAKGKLEGIKGTEQFSLMKDKVDSVITNAVNILKKLVEGTKKFKEATDGANGKIGNANGTEDAVQADIASVKSLVEGINMIYEAAKEVKVDSKGNADKTIADSKAIAKLFNDTASADATGLKAANVALNSSSGADILAAIDSAKNGINAPAGQISAAKNAYDIAVAIKNSADAGADVREKGSVITAGLALRAMAKNGKLATHANVPAEGLNAVLIGAVSKTVNEIVSTIRRTVDKCLKDVNDCIKEGFSSVVKS
SIO_010081: BRE_RS05160
subclass of: SO_0000673
so part of: BRE_RS05160
location: complement(3385..4425)
location: region:3385-4425:-1
so has part: feature:3385-4425:-1:exon

WP_049752033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3385-4425:-1:exon

BRE_RS05165
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05165
old locus tag: BRE_4004
pseudo: true
so part of: sequence
location: complement(4622..5658)
location: region:4622-5658:-1
so has part: feature:4622-5658:-1:exon
subclass of: SO_0000010

position:4622:-1
position: 4622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5658:-1
position: 5658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4622-5658:-1:exon

BRE_RS05165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05165
old locus tag: BRE_4004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539664.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05165
subclass of: SO_0000673
so part of: BRE_RS05165
location: complement(4622..5658)
location: region:4622-5658:-1
so has part: feature:4622-5658:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4622-5658:-1:exon

BRE_RS06390
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06390
so part of: sequence
location: complement(5612..5788)
location: region:5612-5788:-1
so has part: feature:5612-5788:-1:exon
subclass of: SO_0000010

position:5612:-1
position: 5612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5788:-1
position: 5788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5612-5788:-1:exon

BRE_RS06390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASLINKLVRKLKRKKKQGGEENEERRNSRGNKREERKRESKENENEGINIDDDSDGM
SIO_010081: BRE_RS06390
subclass of: SO_0000673
so part of: BRE_RS06390
location: complement(5612..5788)
location: region:5612-5788:-1
so has part: feature:5612-5788:-1:exon

WP_198004645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5612-5788:-1:exon

BRE_RS06260
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06260
so part of: sequence
location: complement(5987..6136)
location: region:5987-6136:-1
so has part: feature:5987-6136:-1:exon
subclass of: SO_0000010

position:5987:-1
position: 5987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6136:-1
position: 6136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5987-6136:-1:exon

BRE_RS06260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06260
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYNSKINSYELYKHSIFFRNYINNGAEDVLHNGITLEIVYSTDLKRDK
SIO_010081: BRE_RS06260
subclass of: SO_0000673
so part of: BRE_RS06260
location: complement(5987..6136)
location: region:5987-6136:-1
so has part: feature:5987-6136:-1:exon

WP_156768705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5987-6136:-1:exon

BRE_RS06625
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
gene: bdr
locus tag: BRE_RS06625
old locus tag: BRE_4005
so part of: sequence
location: complement(6301..6993)
location: region:6301-6993:-1
so has part: feature:6301-6993:-1:exon
subclass of: SO_0000010

position:6301:-1
position: 6301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6993:-1
position: 6993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6301-6993:-1:exon

BRE_RS06625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
gene: bdr
locus tag: BRE_RS06625
old locus tag: BRE_4005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539550.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MEYMQMEPVITRQMVLNELVKAGINREIADDLSYRYYKNELTTKDLQYLESNFNLKLEMLERGLKAEIRELDTKIDTVENNLNIKIDIKFTELDNKIDIVENNLNNKIDKVRDELKSDIKELDNKIDTVENNLSNKIDAKFAELDNKIDVKFNELDNKIDTVRKDMEVNKMELDTKIDIKFNELDTKIDKFASDVKGTLKLHAWMFGTIITINVGIFLALISMLYALFIK
SIO_010081: BRE_RS06625
subclass of: SO_0000673
so part of: BRE_RS06625
location: complement(6301..6993)
location: region:6301-6993:-1
so has part: feature:6301-6993:-1:exon

WP_012539611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6301-6993:-1:exon

BRE_RS06630
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06630
so part of: sequence
location: complement(7035..7418)
location: region:7035-7418:-1
so has part: feature:7035-7418:-1:exon
subclass of: SO_0000010

position:7035:-1
position: 7035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7418:-1
position: 7418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7035-7418:-1:exon

BRE_RS06630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06630
inference: COORDINATES: protein motif:HMM:NF036421.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTTKVIMGNLNVNTLYIEDRDDIKGSEALTREYVRLRDNMENYFRIASTRPKINKHSRIVSLLTPFTYNKMHLLYYSSRSVFRDIYSYNGDGKIHDDVLNALSAAYLIMSLNYRDRSQHFTKFTFI
SIO_010081: BRE_RS06630
subclass of: SO_0000673
so part of: BRE_RS06630
location: complement(7035..7418)
location: region:7035-7418:-1
so has part: feature:7035-7418:-1:exon

WP_083764330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7035-7418:-1:exon

BRE_RS06635
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06635
so part of: sequence
location: complement(7925..8077)
location: region:7925-8077:-1
so has part: feature:7925-8077:-1:exon
subclass of: SO_0000010

position:7925:-1
position: 7925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8077:-1
position: 8077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7925-8077:-1:exon

BRE_RS06635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06635
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKKFLTKKQRKVLLDIEKNNQNKVILSGGIASGKTFLACYLFLKTLLKK
SIO_010081: BRE_RS06635
subclass of: SO_0000673
so part of: BRE_RS06635
location: complement(7925..8077)
location: region:7925-8077:-1
so has part: feature:7925-8077:-1:exon

WP_232212764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7925-8077:-1:exon

BRE_RS06640
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06640
so part of: sequence
location: complement(8055..8195)
location: region:8055-8195:-1
so has part: feature:8055-8195:-1:exon
subclass of: SO_0000010

position:8055:-1
position: 8055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8195:-1
position: 8195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8055-8195:-1:exon

BRE_RS06640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014696745.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIYDLPLFKKMQREYKREFGVDIGSFIKPKPVVVDFKSFEKKVLN
SIO_010081: BRE_RS06640
subclass of: SO_0000673
so part of: BRE_RS06640
location: complement(8055..8195)
location: region:8055-8195:-1
so has part: feature:8055-8195:-1:exon

WP_232212765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8055-8195:-1:exon

BRE_RS06075
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06075
so part of: sequence
location: complement(8207..8431)
location: region:8207-8431:-1
so has part: feature:8207-8431:-1:exon
subclass of: SO_0000010

position:8207:-1
position: 8207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8431:-1
position: 8431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8207-8431:-1:exon

BRE_RS06075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06075
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MELESYNKEIKALESKIERLREGINNEDDQDLNNKLCELDEVKRAKELKKMKLYYQAMLKLKATDFESQVKFKI
SIO_010081: BRE_RS06075
subclass of: SO_0000673
so part of: BRE_RS06075
location: complement(8207..8431)
location: region:8207-8431:-1
so has part: feature:8207-8431:-1:exon

WP_083764331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8207-8431:-1:exon

BRE_RS06080
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06080
so part of: sequence
location: complement(8434..8664)
location: region:8434-8664:-1
so has part: feature:8434-8664:-1:exon
subclass of: SO_0000010

position:8434:-1
position: 8434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8664:-1
position: 8664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8434-8664:-1:exon

BRE_RS06080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06080
inference: COORDINATES: protein motif:HMM:NF016524.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF603 domain-containing protein
translation: MGVSCANVCKIRRRWESRESNNLEEHLKVTISEETLNNVLIRAFEYSAQSSSIKSQLHMARNRLGLEFIASFNSPI
SIO_010081: BRE_RS06080
subclass of: SO_0000673
so part of: BRE_RS06080
location: complement(8434..8664)
location: region:8434-8664:-1
so has part: feature:8434-8664:-1:exon

WP_232212766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8434-8664:-1:exon

BRE_RS05185
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05185
old locus tag: BRE_4008
so part of: sequence
location: 8903..9598
location: region:8903-9598:1
so has part: feature:8903-9598:1:exon
subclass of: SO_0000010

position:8903:1
position: 8903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9598:1
position: 9598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8903-9598:1:exon

BRE_RS05185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05185
old locus tag: BRE_4008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539777.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKNKSILILCIILLYGCNANKTPSQRMPDSAQITKSQDDLLKPQDLESKSQKHAHITLTTEEKMKFEIFIYALNIFQKDRFAFYNRMKQDISQEVKNLFNKYYKFRSWISDDQHIQEQKELSKAFNYAYNRILYNKLKSSDNDQITMQYIEGAFYYYLYDQYKDNHHYDGKLYGSTNSGFPTNYVSLFFEHFIYTIIAKYDTNEKIFQAIKNELEEKNSEIYAKTLNMLS
SIO_010081: BRE_RS05185
subclass of: SO_0000673
so part of: BRE_RS05185
location: 8903..9598
location: region:8903-9598:1
so has part: feature:8903-9598:1:exon

WP_012539612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8903-9598:1:exon

BRE_RS05190
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05190
old locus tag: BRE_4009
pseudo: true
so part of: sequence
location: 9763..>10137
location: region:9763-10137:1
so has part: feature:9763-10137:1:exon
subclass of: SO_0000010

position:9763:1
position: 9763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10137:1
position: 10137
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9763-10137:1:exon

BRE_RS05190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05190
old locus tag: BRE_4009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010260153.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Mlp family lipoprotein
SIO_010081: BRE_RS05190
subclass of: SO_0000673
so part of: BRE_RS05190
location: 9763..>10137
location: region:9763-10137:1
so has part: feature:9763-10137:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9763-10137:1:exon

BRE_RS05195
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05195
old locus tag: BRE_4010
pseudo: true
so part of: sequence
location: <10755..11394
location: region:10755-11394:1
so has part: feature:10755-11394:1:exon
subclass of: SO_0000010

position:10755:1
position: 10755
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:11394:1
position: 11394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10755-11394:1:exon

BRE_RS05195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05195
old locus tag: BRE_4010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014486141.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
SIO_010081: BRE_RS05195
subclass of: SO_0000673
so part of: BRE_RS05195
location: <10755..11394
location: region:10755-11394:1
so has part: feature:10755-11394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10755-11394:1:exon

BRE_RS06645
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06645
so part of: sequence
location: complement(11655..11756)
location: region:11655-11756:-1
so has part: feature:11655-11756:-1:exon
subclass of: SO_0000010

position:11655:-1
position: 11655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11756:-1
position: 11756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11655-11756:-1:exon

BRE_RS06645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06645
inference: COORDINATES: protein motif:HMM:NF015173.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF261 family protein
translation: MATNNTKVLYDPLFLKDRGQEYHLKSKRIFRKI
SIO_010081: BRE_RS06645
subclass of: SO_0000673
so part of: BRE_RS06645
location: complement(11655..11756)
location: region:11655-11756:-1
so has part: feature:11655-11756:-1:exon

WP_232212767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11655-11756:-1:exon

BRE_RS05200
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05200
old locus tag: BRE_4011
so part of: sequence
location: complement(11767..12078)
location: region:11767-12078:-1
so has part: feature:11767-12078:-1:exon
subclass of: SO_0000010

position:11767:-1
position: 11767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12078:-1
position: 12078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11767-12078:-1:exon

BRE_RS05200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05200
old locus tag: BRE_4011
inference: COORDINATES: protein motif:HMM:NF015173.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF261 family protein
translation: MKLQQNDNRFLLEIRRWGCYFLSLHYYISSLTKNEFDFNDINNYYQLVRLDYMRINCYIVNPCRILSFFVIKRDVRVEDKDYKCLKDEFEISEVKIRNNIGSH
SIO_010081: BRE_RS05200
subclass of: SO_0000673
so part of: BRE_RS05200
location: complement(11767..12078)
location: region:11767-12078:-1
so has part: feature:11767-12078:-1:exon

WP_232212768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11767-12078:-1:exon

BRE_RS06800
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06800
so part of: sequence
location: complement(12123..12344)
location: region:12123-12344:-1
so has part: feature:12123-12344:-1:exon
subclass of: SO_0000010

position:12123:-1
position: 12123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12344:-1
position: 12344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12123-12344:-1:exon

BRE_RS06800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06800
inference: COORDINATES: protein motif:HMM:NF012651.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHFLHKGKQVVVHGFMRHEYYKDKHSEVNKIKSIIFVEQLRLFGSDSKHYNSKVDIPIPFPNPAYEFNEDIPF
SIO_010081: BRE_RS06800
subclass of: SO_0000673
so part of: BRE_RS06800
location: complement(12123..12344)
location: region:12123-12344:-1
so has part: feature:12123-12344:-1:exon

WP_269516822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12123-12344:-1:exon

BRE_RS06805
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06805
so part of: sequence
location: complement(12404..12535)
location: region:12404-12535:-1
so has part: feature:12404-12535:-1:exon
subclass of: SO_0000010

position:12404:-1
position: 12404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12535:-1
position: 12535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12404-12535:-1:exon

BRE_RS06805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014696737.1
GO function: GO:0003697 - single-stranded DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MSDINNITLLGRLVRDSLLSYSSTNLTVLNFSIANNIKVKREG
SIO_010081: BRE_RS06805
subclass of: SO_0000673
so part of: BRE_RS06805
location: complement(12404..12535)
location: region:12404-12535:-1
so has part: feature:12404-12535:-1:exon

WP_269516818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12404-12535:-1:exon

BRE_RS06275
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06275
so part of: sequence
location: complement(12528..12752)
location: region:12528-12752:-1
so has part: feature:12528-12752:-1:exon
subclass of: SO_0000010

position:12528:-1
position: 12528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12752:-1
position: 12752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12528-12752:-1:exon

BRE_RS06275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGGGAYDYKCNNLHFNNFISYVKFIYKCLSNTIKKYVYEYHTTKEYDEYLGNLYCDLQRMEIRRRLYDDGGFDV
SIO_010081: BRE_RS06275
subclass of: SO_0000673
so part of: BRE_RS06275
location: complement(12528..12752)
location: region:12528-12752:-1
so has part: feature:12528-12752:-1:exon

WP_041178244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12528-12752:-1:exon

BRE_RS06650
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06650
so part of: sequence
location: complement(12752..12946)
location: region:12752-12946:-1
so has part: feature:12752-12946:-1:exon
subclass of: SO_0000010

position:12946:-1
position: 12946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12752-12946:-1:exon

BRE_RS06650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06650
inference: COORDINATES: protein motif:HMM:NF015096.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFELTDNIVYRLGKNVFALNSGKRAIKDRFKLITDHYDYYDINDINSRRKFSISNPVSFTSYAI
SIO_010081: BRE_RS06650
subclass of: SO_0000673
so part of: BRE_RS06650
location: complement(12752..12946)
location: region:12752-12946:-1
so has part: feature:12752-12946:-1:exon

WP_232212769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12752-12946:-1:exon

BRE_RS05215
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05215
old locus tag: BRE_4013
so part of: sequence
location: complement(13014..13571)
location: region:13014-13571:-1
so has part: feature:13014-13571:-1:exon
subclass of: SO_0000010

position:13014:-1
position: 13014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13571:-1
position: 13571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13014-13571:-1:exon

BRE_RS05215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05215
old locus tag: BRE_4013
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRMCYCQLCQLDIKCSDSNYLTSAITEYNQTGNFLDSKYFFKYYVQVQVQLACTGLSKCNLFFLIGDEPINCVIERNNGVIAKVMIYIAALDMEIERMCNIIKRDKSIDLANIDIEDLTNHIKLFLQDSKYYSSLAELNYKDEFISFINIVKLNIGAKDRSLLEKYLVDIQSKQTEIDKEEKESC
SIO_010081: BRE_RS05215
subclass of: SO_0000673
so part of: BRE_RS05215
location: complement(13014..13571)
location: region:13014-13571:-1
so has part: feature:13014-13571:-1:exon

WP_049752027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13014-13571:-1:exon

BRE_RS06285
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06285
so part of: sequence
location: 13896..14114
location: region:13896-14114:1
so has part: feature:13896-14114:1:exon
subclass of: SO_0000010

position:13896:1
position: 13896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14114:1
position: 14114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13896-14114:1:exon

BRE_RS06285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06285
inference: COORDINATES: protein motif:HMM:NF017132.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BlyB family putative holin accessory protein
translation: MFSLYEASINRMEQNEAIKLLSELEKIIRINIKIIKNSNDYYNQDDNAKYISQLRNKRNKIMNSYIKILKKA
SIO_010081: BRE_RS06285
subclass of: SO_0000673
so part of: BRE_RS06285
location: 13896..14114
location: region:13896-14114:1
so has part: feature:13896-14114:1:exon

WP_232212775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13896-14114:1:exon

BRE_RS05870
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05870
old locus tag: BRE_4014
so part of: sequence
location: 14175..14522
location: region:14175-14522:1
so has part: feature:14175-14522:1:exon
subclass of: SO_0000010

position:14175:1
position: 14175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14522:1
position: 14522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14175-14522:1:exon

BRE_RS05870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05870
old locus tag: BRE_4014
inference: COORDINATES: protein motif:HMM:NF014992.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYYYRFTNRRPTLSKTESIKGLSTYEAKLADYIMYLQVFLTRTQKKLKTPINPKFTYFNPAELKSEHTVENLKFNIKLFQDYITITKPIAQDVYKRYSKLKINYLGPLWGFLLSR
SIO_010081: BRE_RS05870
subclass of: SO_0000673
so part of: BRE_RS05870
location: 14175..14522
location: region:14175-14522:1
so has part: feature:14175-14522:1:exon

WP_232212770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14175-14522:1:exon

BRE_RS06810
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06810
so part of: sequence
location: complement(14985..15149)
location: region:14985-15149:-1
so has part: feature:14985-15149:-1:exon
subclass of: SO_0000010

position:14985:-1
position: 14985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15149:-1
position: 15149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14985-15149:-1:exon

BRE_RS06810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06810
inference: COORDINATES: protein motif:HMM:NF016302.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ERF family protein
translation: MGSTIIYFKRYALVAYLSIESEVGTDASNLDLEQKNKLKIIFLVVKMAVQTDHL
SIO_010081: BRE_RS06810
subclass of: SO_0000673
so part of: BRE_RS06810
location: complement(14985..15149)
location: region:14985-15149:-1
so has part: feature:14985-15149:-1:exon

WP_269516819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14985-15149:-1:exon

BRE_RS06655
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06655
so part of: sequence
location: complement(15085..15429)
location: region:15085-15429:-1
so has part: feature:15085-15429:-1:exon
subclass of: SO_0000010

position:15085:-1
position: 15085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15429:-1
position: 15429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15085-15429:-1:exon

BRE_RS06655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06655
inference: COORDINATES: protein motif:HMM:NF016302.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ERF family protein
translation: MNCVNKNLSEDRYNYQDFNGIVREVKNVINEHDLDIDFVQCPTTKSIDGNLVDVVITTFYSPLSGYEHSFDTSTHIKRIEVSWGQKLKYMAAACGVYNNLFQTLCLSCIFINRK
SIO_010081: BRE_RS06655
subclass of: SO_0000673
so part of: BRE_RS06655
location: complement(15085..15429)
location: region:15085-15429:-1
so has part: feature:15085-15429:-1:exon

WP_232212771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15085-15429:-1:exon

BRE_RS05235
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05235
old locus tag: BRE_4016
so part of: sequence
location: 15721..16425
location: region:15721-16425:1
so has part: feature:15721-16425:1:exon
subclass of: SO_0000010

position:15721:1
position: 15721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16425:1
position: 16425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15721-16425:1:exon

BRE_RS05235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05235
old locus tag: BRE_4016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539734.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid maintenance protein
translation: MNSNENSLPYTKPSKKYHNRYYKIVSIVKFFQKNSIKYNQTSILNTLNRFLAKDELKIITLRTLRKDLALLCNQGIIKKTLLRLGEGNGSYIRYSANKYSLRNLKRFLENKQAIVEHDANATYKFTKETQQKYYLKNKELNIYKSKNATKNVSHNITNNKKINNKKKKREKTKEIEKKTIDTNYMIKNVSKWKTMRYLDKVKENENKKRYEDSIKRTKEWLKNLKIENNTYKNC
SIO_010081: BRE_RS05235
subclass of: SO_0000673
so part of: BRE_RS05235
location: 15721..16425
location: region:15721-16425:1
so has part: feature:15721-16425:1:exon

WP_012539614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15721-16425:1:exon

BRE_RS05240
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05240
old locus tag: BRE_4017
so part of: sequence
location: 16454..17014
location: region:16454-17014:1
so has part: feature:16454-17014:1:exon
subclass of: SO_0000010

position:16454:1
position: 16454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17014:1
position: 17014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16454-17014:1:exon

BRE_RS05240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05240
old locus tag: BRE_4017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539615.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF226 domain-containing protein
translation: MEDSLRRLKEKKLEIEKNQNKKDVFLKVERAKDRTIYHTKIFRDFYAFGIDKNDSNKFFLIFRDLFKDKTCKFHLFSIKDGDKFLGMYYGYRKPIKNVISKYKENGIIKTYTFPKVFYVEFRFKKGSVFCYIKGIYYFFRKEKSNTKYCKILFEIINRLEKQIYAFYGKQLPSGGIIKRWLEKNQK
SIO_010081: BRE_RS05240
subclass of: SO_0000673
so part of: BRE_RS05240
location: 16454..17014
location: region:16454-17014:1
so has part: feature:16454-17014:1:exon

WP_012539615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16454-17014:1:exon

BRE_RS05245
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05245
old locus tag: BRE_4018
so part of: sequence
location: 16990..17739
location: region:16990-17739:1
so has part: feature:16990-17739:1:exon
subclass of: SO_0000010

position:16990:1
position: 16990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17739:1
position: 17739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16990-17739:1:exon

BRE_RS05245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05245
old locus tag: BRE_4018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539616.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MARKKPEIITIASIKGGVGKSTTSIIFAILLAQKYKVLLIDMDTQASTTSYFYEKIEKRNMDLRSNNIYEVLIDKLNINSSILNVENNLDLIPSYLTLHSINAFGYKHAFSEFKLKNDLKYLDVQYDYIVIDTPPSLDFTLTSSLICCNYLIVPMTAEKWTVESFDLLKFFMDKIALELPIFFVITRFKKNNTHKKLLKMIHSKNNFLGAISEREDLNKRIAENNIFDFEKDYIKEYKNSLINFFAKIN
SIO_010081: BRE_RS05245
subclass of: SO_0000673
so part of: BRE_RS05245
location: 16990..17739
location: region:16990-17739:1
so has part: feature:16990-17739:1:exon

WP_012539616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16990-17739:1:exon

BRE_RS05250
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05250
old locus tag: BRE_4019
so part of: sequence
location: 17796..18371
location: region:17796-18371:1
so has part: feature:17796-18371:1:exon
subclass of: SO_0000010

position:17796:1
position: 17796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18371:1
position: 18371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17796-18371:1:exon

BRE_RS05250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05250
old locus tag: BRE_4019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539617.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chromosome replication/partitioning protein
translation: MKNDKSVKIYKRDIDSKGNALLSESNNNEESVEAVHYSTLKKKLYINLREGIYNKIECMKILKEIKDNEYYKLDGYKSFDAFIKNYNVAKTQAYNYLKIAAALEEGLLEEKFVLENGFRQILSLLRDKQGKTIKRSKQNPIKPLRFQLKRQESYDFYKKNAKFTSFLLDKLFQSKQDLIEEFLKEFESLRG
SIO_010081: BRE_RS05250
subclass of: SO_0000673
so part of: BRE_RS05250
location: 17796..18371
location: region:17796-18371:1
so has part: feature:17796-18371:1:exon

WP_012539617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17796-18371:1:exon

BRE_RS06660
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06660
so part of: sequence
location: 18796..18963
location: region:18796-18963:1
so has part: feature:18796-18963:1:exon
subclass of: SO_0000010

position:18796:1
position: 18796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18963:1
position: 18963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18796-18963:1:exon

BRE_RS06660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06660
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNMNKKINNGVKRMNQQDLYTQQVIKGLESFIPIPDSDNNKQINVSKMSKIFQV
SIO_010081: BRE_RS06660
subclass of: SO_0000673
so part of: BRE_RS06660
location: 18796..18963
location: region:18796-18963:1
so has part: feature:18796-18963:1:exon

WP_232212772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18796-18963:1:exon

BRE_RS06665
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06665
so part of: sequence
location: 19041..19481
location: region:19041-19481:1
so has part: feature:19041-19481:1:exon
subclass of: SO_0000010

position:19041:1
position: 19041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19481:1
position: 19481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19041-19481:1:exon

BRE_RS06665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06665
inference: COORDINATES: protein motif:HMM:NF021128.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqaJ viral recombinase family protein
translation: MVKLLLNLIVSRVLKSFGKEVPYKDNLHIKKGKALENLGFDEFLSIYSDNIQILHKNKYANGIDKYNYFKRVGRGDNLVGATIDGWFVNNQGEVEILEIKCSDSTYLISAVTEYNRTGNFLDSKYFFKYYVQTQVQLACTSLSKCF
SIO_010081: BRE_RS06665
subclass of: SO_0000673
so part of: BRE_RS06665
location: 19041..19481
location: region:19041-19481:1
so has part: feature:19041-19481:1:exon

WP_232212776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19041-19481:1:exon

BRE_RS06670
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06670
so part of: sequence
location: 19493..20143
location: region:19493-20143:1
so has part: feature:19493-20143:1:exon
subclass of: SO_0000010

position:19493:1
position: 19493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20143:1
position: 20143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19493-20143:1:exon

BRE_RS06670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06670
inference: COORDINATES: protein motif:HMM:NF015096.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF244 domain-containing protein
translation: MLLILIKMLLIGDEPVNCVIESNNRLIGKMMIYITVLDMEVKRICNLLKNDNSIEIANIDIENLTNHTKLLLQDSKYYSSLAELNYKDEFISFINIVNLNIGSEERELLEKHLVDIQSKQTEIKKKEHAKELYALTKQDKDVLKDIFGKLSMDFELTDNIVYRLGKNIFALNLGKRAIKDRFKLITDHYAYYDINDISANRKFYISNPVSSILYAI
SIO_010081: BRE_RS06670
subclass of: SO_0000673
so part of: BRE_RS06670
location: 19493..20143
location: region:19493-20143:1
so has part: feature:19493-20143:1:exon

WP_232212773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19493-20143:1:exon

BRE_RS06290
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06290
so part of: sequence
location: 20159..20368
location: region:20159-20368:1
so has part: feature:20159-20368:1:exon
subclass of: SO_0000010

position:20159:1
position: 20159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20368:1
position: 20368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20159-20368:1:exon

BRE_RS06290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIIHLIIFILIILYRMLKCIYKCLRNIIKKYVYDYHTTKEYDEYLGNLYCDLHRIEIRRRLYDDGGFDV
SIO_010081: BRE_RS06290
subclass of: SO_0000673
so part of: BRE_RS06290
location: 20159..20368
location: region:20159-20368:1
so has part: feature:20159-20368:1:exon

WP_156768708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20159-20368:1:exon

BRE_RS06675
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06675
pseudo: true
so part of: sequence
location: <20514..20774
location: region:20514-20774:1
so has part: feature:20514-20774:1:exon
subclass of: SO_0000010

position:20514:1
position: 20514
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:20774:1
position: 20774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20514-20774:1:exon

BRE_RS06675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06675
inference: COORDINATES: protein motif:HMM:NF012651.2
GO function: GO:0003697 - single-stranded DNA binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
SIO_010081: BRE_RS06675
subclass of: SO_0000673
so part of: BRE_RS06675
location: <20514..20774
location: region:20514-20774:1
so has part: feature:20514-20774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20514-20774:1:exon

BRE_RS05260
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05260
old locus tag: BRE_4022
so part of: sequence
location: 20941..21195
location: region:20941-21195:1
so has part: feature:20941-21195:1:exon
subclass of: SO_0000010

position:20941:1
position: 20941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21195:1
position: 21195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20941-21195:1:exon

BRE_RS05260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05260
old locus tag: BRE_4022
inference: COORDINATES: protein motif:HMM:NF015173.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF261 family protein
translation: MNDNYYQFVSLGYMRINYYILNPCRILSFFVIKRDVSVEDKDYKCLKDEFEIREVNIKNTLGSHFMSTNNTEVLYDPLFLKDRG
SIO_010081: BRE_RS05260
subclass of: SO_0000673
so part of: BRE_RS05260
location: 20941..21195
location: region:20941-21195:1
so has part: feature:20941-21195:1:exon

WP_232212778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20941-21195:1:exon

BRE_RS06680
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06680
pseudo: true
so part of: sequence
location: complement(<21634..21858)
location: region:21634-21858:-1
so has part: feature:21634-21858:-1:exon
subclass of: SO_0000010

position:21634:-1
position: 21634
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:21858:-1
position: 21858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21634-21858:-1:exon

BRE_RS06680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06680
inference: COORDINATES: protein motif:HMM:NF012798.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: site-specific integrase
SIO_010081: BRE_RS06680
subclass of: SO_0000673
so part of: BRE_RS06680
location: complement(<21634..21858)
location: region:21634-21858:-1
so has part: feature:21634-21858:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21634-21858:-1:exon

BRE_RS05270
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05270
old locus tag: BRE_4024
so part of: sequence
location: complement(22583..23014)
location: region:22583-23014:-1
so has part: feature:22583-23014:-1:exon
subclass of: SO_0000010

position:22583:-1
position: 22583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23014:-1
position: 23014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22583-23014:-1:exon

BRE_RS05270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05270
old locus tag: BRE_4024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539767.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipoprotein MlpL
translation: MNKLNILFLIIILLLNNCKQSSSNTQNKEDKHKKDLTEEQLKEKQKNPEMLLKEKLSDDQKKALEFFKEALNNESTFNEFLKLDISKINPILDHIHNEVTPCTREKANSKDQFKTLIKGYFNNQIDDNKLNDFATNVKSMCNS
SIO_010081: BRE_RS05270
subclass of: SO_0000673
so part of: BRE_RS05270
location: complement(22583..23014)
location: region:22583-23014:-1
so has part: feature:22583-23014:-1:exon

WP_012539618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22583-23014:-1:exon

BRE_RS05275
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05275
so part of: sequence
location: complement(23259..23858)
location: region:23259-23858:-1
so has part: feature:23259-23858:-1:exon
subclass of: SO_0000010

position:23259:-1
position: 23259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23858:-1
position: 23858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23259-23858:-1:exon

BRE_RS05275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVAIQKNPTQANGDASQITRSTDESTLQKINSDTKEKNRFDLLMYGFGLAQKNLTIKYKDNAKSLDPINKYEIFRTWILDKAQIQKQKELSKAFINAYNCLDKKVKTLNNHMTIMQYVENAFAQYLYNEYKTSRQYDARLYGNKTGGFPVNHVSSFFESLIYTLIKDHDTNEKKFQIMKDILEDKNSRIYKNISKLLTD
SIO_010081: BRE_RS05275
subclass of: SO_0000673
so part of: BRE_RS05275
location: complement(23259..23858)
location: region:23259-23858:-1
so has part: feature:23259-23858:-1:exon

WP_049752031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23259-23858:-1:exon

BRE_RS05280
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05280
old locus tag: BRE_4025
so part of: sequence
location: 24060..24599
location: region:24060-24599:1
so has part: feature:24060-24599:1:exon
subclass of: SO_0000010

position:24060:1
position: 24060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24599:1
position: 24599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24060-24599:1:exon

BRE_RS05280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05280
old locus tag: BRE_4025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539544.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF603 domain-containing protein
translation: MNKVKKSFDDYIVYFNEGKLSDAQISKEMGVNRANVCKIRRRWESRESNNLEEHPKVTISEETLNNVLICASEHNAQSGSIRSQLHMSRNRLGLEFIASFNSYLDLEFKSYNNEIKVLESKIERLREGIDNEDEQDLNNNLCELDEVKRAKEFKKMELYYQAMLKLKATDFESQVKFKI
SIO_010081: BRE_RS05280
subclass of: SO_0000673
so part of: BRE_RS05280
location: 24060..24599
location: region:24060-24599:1
so has part: feature:24060-24599:1:exon

WP_012539619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24060-24599:1:exon

BRE_RS06685
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06685
so part of: sequence
location: 24612..25037
location: region:24612-25037:1
so has part: feature:24612-25037:1:exon
subclass of: SO_0000010

position:24612:1
position: 24612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25037:1
position: 25037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24612-25037:1:exon

BRE_RS06685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06685
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIYDLSLFKSMQREYKRKFGIDIASFIKPKPVVVDFKSFGKKFLNKKQRKVLLNIEKNNQNEVILSGGIAGGKTFLACYLFLKTLLKNRHLYEKDTNNFILGNSQKSLEINVTRQFKKLANILKIPFVPKYSNTSYFAIL
SIO_010081: BRE_RS06685
subclass of: SO_0000673
so part of: BRE_RS06685
location: 24612..25037
location: region:24612-25037:1
so has part: feature:24612-25037:1:exon

WP_232212774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24612-25037:1:exon

BRE_RS06690
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06690
so part of: sequence
location: 25142..25960
location: region:25142-25960:1
so has part: feature:25142-25960:1:exon
subclass of: SO_0000010

position:25142:1
position: 25142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25960:1
position: 25960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25142-25960:1:exon

BRE_RS06690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06690
inference: COORDINATES: protein motif:HMM:NF036421.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKEALKRLRMKPEFIIFDTNPDHPEHYFKIDYIDNNTVYSTYNFITYDNETIAKEFIKTQEEICKNLPTYKSSVLFGEWVANNDSIFSNINLIKDYEFKSPIAYLDSAYSSGGDNTALCVLEKVSDKYYAFIFQDQKPVVDPYIMNTIKVIMGNLNVNTLYIEDRDDIKGSGALTREYVRLRDNIQNYFRIAPTRPKTDKYARIVSLLTPFTYNKMHLLDYSSRSVFSNIYSYNGDGKVHDDALDALSAAYLIISLNYRDRSRHFTKFTFI
SIO_010081: BRE_RS06690
subclass of: SO_0000673
so part of: BRE_RS06690
location: 25142..25960
location: region:25142-25960:1
so has part: feature:25142-25960:1:exon

WP_232212779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25142-25960:1:exon

BRE_RS05290
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
gene: bdr
locus tag: BRE_RS05290
old locus tag: BRE_4027
so part of: sequence
location: 26002..26475
location: region:26002-26475:1
so has part: feature:26002-26475:1:exon
subclass of: SO_0000010

position:26002:1
position: 26002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26475:1
position: 26475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26002-26475:1:exon

BRE_RS05290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
gene: bdr
locus tag: BRE_RS05290
old locus tag: BRE_4027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683279.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bdr family repetitive protein
translation: MEYMQMEPVITRQMVLNELVKAGINREIADDLSYRYYKNELTIKDLQYLESNFNLKLEILERGLKADIKELDNKIDIIENNLNNKIDTKFTELDNKIDKVRDELKSDITSVSHEVVLIRKDMEVNKMELNSKLKLHAWMFGTIITLTIGILLTLIFK
SIO_010081: BRE_RS05290
subclass of: SO_0000673
so part of: BRE_RS05290
location: 26002..26475
location: region:26002-26475:1
so has part: feature:26002-26475:1:exon

WP_012539620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26002-26475:1:exon

BRE_RS05295
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05295
old locus tag: BRE_4028
so part of: sequence
location: 26624..26833
location: region:26624-26833:1
so has part: feature:26624-26833:1:exon
subclass of: SO_0000010

position:26624:1
position: 26624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26833:1
position: 26833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26624-26833:1:exon

BRE_RS05295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05295
old locus tag: BRE_4028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683268.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYNYKINSYELYRHSIFFRNYINNVGEDVLHNGINLEIVYRTALGGIEDMLDNLKVKLKEALLNCIIY
SIO_010081: BRE_RS05295
subclass of: SO_0000673
so part of: BRE_RS05295
location: 26624..26833
location: region:26624-26833:1
so has part: feature:26624-26833:1:exon

WP_041178246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26624-26833:1:exon

BRE_RS05300
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05300
old locus tag: BRE_4029
pseudo: true
so part of: sequence
location: 26833..27793
location: region:26833-27793:1
so has part: feature:26833-27793:1:exon
subclass of: SO_0000010

position:27793:1
position: 27793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26833-27793:1:exon

BRE_RS05300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05300
old locus tag: BRE_4029
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539478.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05300
subclass of: SO_0000673
so part of: BRE_RS05300
location: 26833..27793
location: region:26833-27793:1
so has part: feature:26833-27793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26833-27793:1:exon

BRE_RS05305
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05305
old locus tag: BRE_4030
so part of: sequence
location: 28035..28739
location: region:28035-28739:1
so has part: feature:28035-28739:1:exon
subclass of: SO_0000010

position:28035:1
position: 28035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28739:1
position: 28739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28035-28739:1:exon

BRE_RS05305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05305
old locus tag: BRE_4030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014696704.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Vsp/OspC family lipoprotein
translation: MKREVKEGEIKGKRDKKVEGKRRVVILMMVMMIVMGYNSGEGIKEGEEGKARKGDGSVIDLKVVSKKIGEAVVFVEDVKEVYTLVKSIDELAKAIKKRIQAGGLQDDNDNLNGTLLAGAYQIMSDAESKLATLEGKAEKFVGMKDKVTSAKQKSTAFLNKLKSENATLGVASAAVSSANAKEAIDRNNGSKTKGAQELVDLNIEIDGLLATAKSFVSDVIKELTTSAKDVVVNP
SIO_010081: BRE_RS05305
subclass of: SO_0000673
so part of: BRE_RS05305
location: 28035..28739
location: region:28035-28739:1
so has part: feature:28035-28739:1:exon

WP_012539621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28035-28739:1:exon

BRE_RS05310
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05310
old locus tag: BRE_4031
pseudo: true
so part of: sequence
location: 28902..29778
location: region:28902-29778:1
so has part: feature:28902-29778:1:exon
subclass of: SO_0000010

position:28902:1
position: 28902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29778:1
position: 29778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28902-29778:1:exon

BRE_RS05310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05310
old locus tag: BRE_4031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014683290.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05310
subclass of: SO_0000673
so part of: BRE_RS05310
location: 28902..29778
location: region:28902-29778:1
so has part: feature:28902-29778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28902-29778:1:exon

BRE_RS05315
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05315
old locus tag: BRE_4032
pseudo: true
so part of: sequence
location: 29729..30771
location: region:29729-30771:1
so has part: feature:29729-30771:1:exon
subclass of: SO_0000010

position:29729:1
position: 29729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30771:1
position: 30771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29729-30771:1:exon

BRE_RS05315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05315
old locus tag: BRE_4032
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014687008.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: variable large family protein
SIO_010081: BRE_RS05315
subclass of: SO_0000673
so part of: BRE_RS05315
location: 29729..30771
location: region:29729-30771:1
so has part: feature:29729-30771:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29729-30771:1:exon

BRE_RS05320
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS05320
old locus tag: BRE_4033
so part of: sequence
location: 30968..32008
location: region:30968-32008:1
so has part: feature:30968-32008:1:exon
subclass of: SO_0000010

position:30968:1
position: 30968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32008:1
position: 32008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30968-32008:1:exon

BRE_RS05320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS05320
old locus tag: BRE_4033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012539605.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MKKGIKGEMINIVMIMCLMVVMGCNSGGVKGEEGKGTQGIGGLGEVISHLREGFLEVFVSFGNILKDTFGLTSNTTKKEVGERLGKIGEAVEVAKGKLEGIKGTEQFSLMKDKVDSVITNAVNILKKLVEGTKKFKEATDGANGKIGNANGTEDAVQADIASVKSLVEGINMIYEAAKEVKVDSKGNADKTIADSKAIAKLFNDTASADATGLKAANVALNSSSGADILAVIDSAKNGINAPAGQISAAKNAYDIAVAIKNSADAGADVREKGSVITAGLALRAMAKNGKLATHANVPAEGLNAVLIGAVSKTVNEIVSTIRRTVDKCLKDVNDCIKEDFSSVVKS
SIO_010081: BRE_RS05320
subclass of: SO_0000673
so part of: BRE_RS05320
location: 30968..32008
location: region:30968-32008:1
so has part: feature:30968-32008:1:exon

WP_049752034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30968-32008:1:exon

BRE_RS06405
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06405
old locus tag: BRE_4034
so part of: sequence
location: 33400..34647
location: region:33400-34647:1
so has part: feature:33400-34647:1:exon
subclass of: SO_0000010

position:33400:1
position: 33400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34647:1
position: 34647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33400-34647:1:exon

BRE_RS06405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06405
old locus tag: BRE_4034
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSKNKYLALGLLLSFINCDLFMNDEIKEKSLGLFDKVHSVLDASAKSISSNKNGKFSQDVVSGDITSGLQNDVQKDIQVALSSTTFETGEAKIQKQQDVESENSITKVSKVYSNVINGLTGGKPLRGTEKEVNYPNVDDGEATSVEIHHNSYLNGFGSTSSSSIQGEIWDSSNFFEVTYNSAYNSEPELSGQNSLSEDYYEEDDDDYDNEHENSYEEDDEDYEGYYDNYDKKESEEKYDKDEYDEEEERLDREYKLRSKNTKDSVKKAFKLAIQIKKDWGTVEFHKTKLNPIYGIRATSDEKQKSQRKLSKFNKNKLIESLTKFLNAIEESLNNADALTNIPEYPGSFAKDLQAKAKLDRLKTEIKTLISKVQKSNKTNYQSYEEIGSSIASSPKIKSELKQVLALLYSLTGAR
SIO_010081: BRE_RS06405
subclass of: SO_0000673
so part of: BRE_RS06405
location: 33400..34647
location: region:33400-34647:1
so has part: feature:33400-34647:1:exon

WP_012539623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33400-34647:1:exon

BRE_RS06300
type: Gene
subclass of: SO_0000704
RO_0002162: 412418
locus tag: BRE_RS06300
so part of: sequence
location: complement(34940..35095)
location: region:34940-35095:-1
so has part: feature:34940-35095:-1:exon
subclass of: SO_0000010

position:34940:-1
position: 34940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35095:-1
position: 35095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34940-35095:-1:exon

BRE_RS06300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 412418
locus tag: BRE_RS06300
inference: COORDINATES: protein motif:HMM:NF013114.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: variable large family protein
translation: MLHYLDLFIILYNREKTNANFAAAVALKTMSKKGKFAAYKRSNILKKFHQH
SIO_010081: BRE_RS06300
subclass of: SO_0000673
so part of: BRE_RS06300
location: complement(34940..35095)
location: region:34940-35095:-1
so has part: feature:34940-35095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34940-35095:-1:exon