Exiguobacterium acetylicum strain SI17 plasmid p3, complete sequence.
Bacteria; Bacillota; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.
Biocontrol using Exiguobacterium acetylicum SI17 against litchi downy blight caused by Peronophythora litchii
Submitted (24-MAY-2021) Guangdong Academy of Agricultural Sciences, Institute of Fruit Tree Research, Dafeng Second, Guangzhou, Guangdong 510640, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP075900.1.\nBacteria and source DNA available from Institute of Fruit Tree\nResearch, Guangdong Academy of Agricultural Sciences.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. v0.4.7\nAssembly Name :: SI17\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 1160.0x\nSequencing Technology :: Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/28/2023 05:22:34\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,553\nCDSs (total) :: 3,452\nGenes (coding) :: 3,433\nCDSs (with protein) :: 3,433\nGenes (RNA) :: 101\nrRNAs :: 9, 9, 9 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 9, 9 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 4\nPseudo Genes (total) :: 19\nCDSs (without protein) :: 19\nPseudo Genes (ambiguous residues) :: 0 of 19\nPseudo Genes (frameshifted) :: 6 of 19\nPseudo Genes (incomplete) :: 13 of 19\nPseudo Genes (internal stop) :: 1 of 19\nPseudo Genes (multiple problems) :: 1 of 19\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF014537.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
replication initiation factor domain-containing protein
COORDINATES: protein motif:HMM:NF017518.2
zonular occludens toxin domain-containing protein