Leptospira kmetyi strain LS 001/16 chromosome 2, complete sequence.
Bacteria; Spirochaetota; Spirochaetia; Leptospirales; Leptospiraceae; Leptospira.
Complete genome sequence of Leptospira kmetyi isolate LS 001/16 from soil sample associated with a leptospirosis patient in Kelantan
Submitted (07-NOV-2018) Institute for Research in Molecular Medicine, Universiti Sains Malaysia, Universiti Sains Malaysia, Kubang Kerian, Kelantan 16150, Malaysia
REFSEQ INFORMATION: The reference sequence is identical to\nCP033615.1.\nBacteria and source DNA available from Bacteria available from\nAziah Ismail, Institute for Research in Molecular Medicine, Health\nCampus, Universiti Sains Malaysia, Kubang Kerian, Kelantan,\nMalaysia.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 162.28x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/23/2023 03:39:48\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,021\nCDSs (total) :: 3,976\nGenes (coding) :: 3,913\nCDSs (with protein) :: 3,913\nGenes (RNA) :: 45\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 37\nncRNAs :: 2\nPseudo Genes (total) :: 63\nCDSs (without protein) :: 63\nPseudo Genes (ambiguous residues) :: 0 of 63\nPseudo Genes (frameshifted) :: 37 of 63\nPseudo Genes (incomplete) :: 33 of 63\nPseudo Genes (internal stop) :: 9 of 63\nPseudo Genes (multiple problems) :: 14 of 63\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
Muhamad Nuramin Ahmad and Farhana Muhammad Yusoff
COORDINATES: similar to AA sequence:RefSeq:WP_000849130.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
adenylate/guanylate cyclase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020772474.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010572384.1
COORDINATES: similar to AA sequence:RefSeq:WP_004467478.1
COORDINATES: similar to AA sequence:RefSeq:WP_001244909.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_016551066.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016752995.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020766257.1
COORDINATES: similar to AA sequence:RefSeq:WP_016750706.1
COORDINATES: similar to AA sequence:RefSeq:WP_004478784.1
COORDINATES: similar to AA sequence:RefSeq:WP_002191754.1
GO:0008705 - methionine synthase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004496665.1
COORDINATES: similar to AA sequence:RefSeq:WP_017855632.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016754072.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_002763014.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_000845496.1
COORDINATES: similar to AA sequence:RefSeq:WP_016545908.1
COORDINATES: similar to AA sequence:RefSeq:WP_000409183.1
COORDINATES: similar to AA sequence:RefSeq:WP_004459707.1
COORDINATES: similar to AA sequence:RefSeq:WP_011671303.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004782383.1
COORDINATES: similar to AA sequence:RefSeq:WP_004756316.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002105810.1
GO:0009190 - cyclic nucleotide biosynthetic process [Evidence IEA]; GO:0035556 - intracellular signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF019315.2
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017862225.1
COORDINATES: similar to AA sequence:RefSeq:WP_000472569.1
COORDINATES: similar to AA sequence:RefSeq:WP_000503524.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572359.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572358.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572357.1
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008588929.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572354.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_008588818.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572352.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572351.1
COORDINATES: similar to AA sequence:RefSeq:WP_004482455.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_008589048.1
COORDINATES: similar to AA sequence:RefSeq:WP_010514419.1
COORDINATES: similar to AA sequence:RefSeq:WP_011670817.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_004505499.1
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: protein motif:HMM:NF025027.2
COORDINATES: similar to AA sequence:RefSeq:WP_016755754.1
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_002753850.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000851075.1
COORDINATES: similar to AA sequence:RefSeq:WP_002115814.1
COORDINATES: similar to AA sequence:RefSeq:WP_020773017.1
COORDINATES: similar to AA sequence:RefSeq:WP_004493090.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004457905.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_004468335.1
COORDINATES: similar to AA sequence:RefSeq:WP_004476138.1
COORDINATES: similar to AA sequence:RefSeq:WP_010577056.1
COORDINATES: similar to AA sequence:RefSeq:WP_010570611.1
COORDINATES: similar to AA sequence:RefSeq:WP_000418124.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016545129.1
COORDINATES: protein motif:HMM:NF016488.2
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: similar to AA sequence:RefSeq:WP_000590458.1
COORDINATES: similar to AA sequence:RefSeq:WP_002752813.1
COORDINATES: similar to AA sequence:RefSeq:WP_020773021.1
COORDINATES: protein motif:HMM:NF012307.2
COORDINATES: similar to AA sequence:RefSeq:WP_002999257.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001134753.1
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002998844.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572331.1
COORDINATES: similar to AA sequence:RefSeq:WP_008591728.1
COORDINATES: similar to AA sequence:RefSeq:WP_002984317.1
metal-sensitive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010572328.1
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002773397.1
COORDINATES: similar to AA sequence:RefSeq:WP_010576319.1
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000747968.1
COORDINATES: similar to AA sequence:RefSeq:WP_017851917.1
COORDINATES: similar to AA sequence:RefSeq:WP_000388447.1
COORDINATES: similar to AA sequence:RefSeq:WP_004453301.1
COORDINATES: protein motif:HMM:NF019224.2
COORDINATES: similar to AA sequence:RefSeq:WP_010572320.1
COORDINATES: similar to AA sequence:RefSeq:WP_017213509.1
COORDINATES: similar to AA sequence:RefSeq:WP_017213508.1
COORDINATES: similar to AA sequence:RefSeq:WP_002998813.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572316.1
COORDINATES: similar to AA sequence:RefSeq:WP_000995313.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004506445.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572312.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572311.1
COORDINATES: similar to AA sequence:RefSeq:WP_002749410.1
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_010572309.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572307.1
COORDINATES: similar to AA sequence:RefSeq:WP_010569775.1
COORDINATES: similar to AA sequence:RefSeq:WP_010569776.1
COORDINATES: similar to AA sequence:RefSeq:WP_002769441.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016551387.1
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010572301.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572300.1
COORDINATES: similar to AA sequence:RefSeq:WP_016544869.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572298.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572296.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572295.1
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: similar to AA sequence:RefSeq:WP_010572293.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010572292.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572291.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010572290.1
COORDINATES: similar to AA sequence:RefSeq:WP_017851332.1
outer membrane protein transport protein
COORDINATES: similar to AA sequence:RefSeq:WP_010572287.1
GO:0046983 - protein dimerization activity [Evidence IEA]
alkyl sulfatase dimerization domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010572286.1
COORDINATES: similar to AA sequence:RefSeq:WP_008589752.1
COORDINATES: similar to AA sequence:RefSeq:WP_008590839.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572283.1
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008590198.1
COORDINATES: similar to AA sequence:RefSeq:WP_008589389.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010572280.1
COORDINATES: similar to AA sequence:RefSeq:WP_008590762.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572278.1
heme-binding beta-barrel domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010572277.1
COORDINATES: similar to AA sequence:RefSeq:WP_016752465.1
COORDINATES: similar to AA sequence:RefSeq:WP_004755016.1
COORDINATES: similar to AA sequence:RefSeq:WP_010570220.1
COORDINATES: similar to AA sequence:RefSeq:WP_020776027.1
COORDINATES: similar to AA sequence:RefSeq:WP_020775742.1
COORDINATES: similar to AA sequence:RefSeq:WP_002772809.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572267.1
COORDINATES: similar to AA sequence:RefSeq:WP_010412372.1
carboxyl transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010572264.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010412375.1
GO:0004318 - enoyl-[acyl-carrier-protein] reductase (NADH) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010412378.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010572261.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010572260.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010572258.1
COORDINATES: similar to AA sequence:RefSeq:WP_016547729.1
COORDINATES: similar to AA sequence:RefSeq:WP_016547478.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010572252.1
COORDINATES: similar to AA sequence:RefSeq:WP_004507510.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572250.1
GO:0016866 - intramolecular transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004467734.1
COORDINATES: similar to AA sequence:RefSeq:WP_008593637.1
transglutaminase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010572246.1
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010572245.1
COORDINATES: similar to AA sequence:RefSeq:WP_004755345.1
COORDINATES: similar to AA sequence:RefSeq:WP_000676636.1
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016545837.1
COORDINATES: similar to AA sequence:RefSeq:WP_004757471.1
COORDINATES: similar to AA sequence:RefSeq:WP_000093711.1
COORDINATES: similar to AA sequence:RefSeq:WP_004450810.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572239.1
COORDINATES: similar to AA sequence:RefSeq:WP_004483963.1
COORDINATES: similar to AA sequence:RefSeq:WP_004756450.1
COORDINATES: similar to AA sequence:RefSeq:WP_002130573.1
COORDINATES: similar to AA sequence:RefSeq:WP_002625175.1
COORDINATES: similar to AA sequence:RefSeq:WP_017861739.1
COORDINATES: similar to AA sequence:RefSeq:WP_001287996.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004490179.1
COORDINATES: similar to AA sequence:RefSeq:WP_000809741.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572230.1
COORDINATES: similar to AA sequence:RefSeq:WP_001011135.1
COORDINATES: similar to AA sequence:RefSeq:WP_004757688.1
COORDINATES: similar to AA sequence:RefSeq:WP_008393660.1
COORDINATES: similar to AA sequence:RefSeq:WP_017850791.1
COORDINATES: similar to AA sequence:RefSeq:WP_002150854.1
COORDINATES: similar to AA sequence:RefSeq:WP_020778914.1
COORDINATES: similar to AA sequence:RefSeq:WP_020766416.1
COORDINATES: similar to AA sequence:RefSeq:WP_004767885.1
COORDINATES: similar to AA sequence:RefSeq:WP_000450145.1
COORDINATES: similar to AA sequence:RefSeq:WP_004507482.1
COORDINATES: similar to AA sequence:RefSeq:WP_008589077.1
COORDINATES: similar to AA sequence:RefSeq:WP_002749208.1
low molecular weight protein-tyrosine-phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_016751885.1
COORDINATES: similar to AA sequence:RefSeq:WP_008588943.1
COORDINATES: similar to AA sequence:RefSeq:WP_017809497.1
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020775295.1
COORDINATES: similar to AA sequence:RefSeq:WP_000684128.1
COORDINATES: similar to AA sequence:RefSeq:WP_002556565.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_001086265.1
COORDINATES: similar to AA sequence:RefSeq:WP_004459912.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572210.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010572209.1
GO:0004729 - oxygen-dependent protoporphyrinogen oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004780564.1
COORDINATES: similar to AA sequence:RefSeq:WP_017858300.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
oxygen-independent coproporphyrinogen III oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_020779373.1
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
uroporphyrinogen decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_001201859.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572205.1
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_004487548.1
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: similar to AA sequence:RefSeq:WP_017850118.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004439289.1
COORDINATES: similar to AA sequence:RefSeq:WP_000269775.1
COORDINATES: similar to AA sequence:RefSeq:WP_000550726.1
COORDINATES: similar to AA sequence:RefSeq:WP_004490192.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010572201.1
COORDINATES: similar to AA sequence:RefSeq:WP_010679666.1
COORDINATES: similar to AA sequence:RefSeq:WP_004756496.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
methylenetetrahydrofolate reductase [NAD(P)H]
COORDINATES: similar to AA sequence:RefSeq:WP_004756381.1
COORDINATES: similar to AA sequence:RefSeq:WP_020772411.1
COORDINATES: similar to AA sequence:RefSeq:WP_004490191.1
COORDINATES: similar to AA sequence:RefSeq:WP_000637633.1
COORDINATES: similar to AA sequence:RefSeq:WP_000931507.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020763258.1
COORDINATES: similar to AA sequence:RefSeq:WP_004756421.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572574.1
COORDINATES: protein motif:HMM:NF018884.2
PP2C family protein-serine/threonine phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_020766068.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572570.1
COORDINATES: similar to AA sequence:RefSeq:WP_004757424.1
COORDINATES: similar to AA sequence:RefSeq:WP_000092012.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000892875.1
COORDINATES: similar to AA sequence:RefSeq:WP_004464849.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010572565.1
COORDINATES: similar to AA sequence:RefSeq:WP_017213437.1
COORDINATES: similar to AA sequence:RefSeq:WP_002622601.1
COORDINATES: similar to AA sequence:RefSeq:WP_002179703.1
COORDINATES: similar to AA sequence:RefSeq:WP_010579398.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572559.1
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_004757601.1
COORDINATES: similar to AA sequence:RefSeq:WP_017213442.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572556.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572555.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004497385.1
COORDINATES: similar to AA sequence:RefSeq:WP_002190828.1
GO:0003994 - aconitate hydratase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010572552.1
COORDINATES: similar to AA sequence:RefSeq:WP_002760189.1
COORDINATES: protein motif:HMM:NF014425.2
COORDINATES: protein motif:HMM:TIGR04453.1
COORDINATES: similar to AA sequence:RefSeq:WP_002724916.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004473380.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572546.1
COORDINATES: similar to AA sequence:RefSeq:WP_004425588.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572544.1
COORDINATES: similar to AA sequence:RefSeq:WP_016545051.1
LytTR family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002180014.1
COORDINATES: similar to AA sequence:RefSeq:WP_002151096.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572540.1
COORDINATES: similar to AA sequence:RefSeq:WP_008595848.1
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008595338.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572537.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572536.1
COORDINATES: similar to AA sequence:RefSeq:WP_004750085.1
COORDINATES: similar to AA sequence:RefSeq:WP_001157559.1
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_020784439.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004750172.1
COORDINATES: similar to AA sequence:RefSeq:WP_000992621.1
COORDINATES: similar to AA sequence:RefSeq:WP_002733373.1
COORDINATES: similar to AA sequence:RefSeq:WP_017809925.1
COORDINATES: similar to AA sequence:RefSeq:WP_002755808.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002755703.1
COORDINATES: similar to AA sequence:RefSeq:WP_016551449.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010572523.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572522.1
cyclopropane-fatty-acyl-phospholipid synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002997637.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572520.1
COORDINATES: similar to AA sequence:RefSeq:WP_004452629.1
COORDINATES: similar to AA sequence:RefSeq:WP_002997731.1
COORDINATES: similar to AA sequence:RefSeq:WP_020762606.1
COORDINATES: similar to AA sequence:RefSeq:WP_004779518.1
COORDINATES: similar to AA sequence:RefSeq:WP_004435606.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000768211.1
phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_002733336.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000201440.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572511.1
GO:0016835 - carbon-oxygen lyase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
methylthioribulose 1-phosphate dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_004428390.1
COORDINATES: similar to AA sequence:RefSeq:WP_002998816.1
histidine kinase N-terminal 7TM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020772353.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572507.1
COORDINATES: similar to AA sequence:RefSeq:WP_002998731.1
COORDINATES: similar to AA sequence:RefSeq:WP_002772533.1
COORDINATES: similar to AA sequence:RefSeq:WP_004756181.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572502.1
COORDINATES: similar to AA sequence:RefSeq:WP_011172451.1
FMN-binding glutamate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004756205.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572499.1
acetyl-CoA hydrolase/transferase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000094629.1
COORDINATES: similar to AA sequence:RefSeq:WP_002998695.1
COORDINATES: similar to AA sequence:RefSeq:WP_000391762.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004426094.1
COORDINATES: similar to AA sequence:RefSeq:WP_000491582.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010572492.1
COORDINATES: similar to AA sequence:RefSeq:WP_020780697.1
COORDINATES: similar to AA sequence:RefSeq:WP_000392371.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572489.1
COORDINATES: similar to AA sequence:RefSeq:WP_016754305.1
COORDINATES: similar to AA sequence:RefSeq:WP_002998746.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572487.1
COORDINATES: similar to AA sequence:RefSeq:WP_010411083.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010572484.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_010572483.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572482.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: similar to AA sequence:RefSeq:WP_004467705.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010572481.1
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: similar to AA sequence:RefSeq:WP_010572479.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572478.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001083454.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010572476.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000715693.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010572475.1
COORDINATES: similar to AA sequence:RefSeq:WP_020772496.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011671372.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: similar to AA sequence:RefSeq:WP_000999239.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572471.1
GO:0008168 - methyltransferase activity [Evidence IEA]
cobalt-precorrin-5B (C(1))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004757394.1
COORDINATES: similar to AA sequence:RefSeq:WP_004430641.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572468.1
GO:0016829 - lyase activity [Evidence IEA]
CbiX/SirB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF021039.2
COORDINATES: similar to AA sequence:RefSeq:WP_008590003.1
COORDINATES: similar to AA sequence:RefSeq:WP_004454620.1
COORDINATES: similar to AA sequence:RefSeq:WP_020763368.1
COORDINATES: similar to AA sequence:RefSeq:WP_004766563.1
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_004762706.1
ClpXP protease specificity-enhancing factor SspB
COORDINATES: similar to AA sequence:RefSeq:WP_016560280.1
COORDINATES: similar to AA sequence:RefSeq:WP_017852795.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004425963.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004750207.1
COORDINATES: similar to AA sequence:RefSeq:WP_002726093.1
COORDINATES: similar to AA sequence:RefSeq:WP_020782227.1
COORDINATES: similar to AA sequence:RefSeq:WP_017213378.1
COORDINATES: similar to AA sequence:RefSeq:WP_002179801.1
COORDINATES: similar to AA sequence:RefSeq:WP_020784922.1
COORDINATES: similar to AA sequence:RefSeq:WP_004426162.1
COORDINATES: similar to AA sequence:RefSeq:WP_016753349.1
COORDINATES: similar to AA sequence:RefSeq:WP_017213382.1
COORDINATES: similar to AA sequence:RefSeq:WP_001226840.1
COORDINATES: similar to AA sequence:RefSeq:WP_004503863.1
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020772505.1
COORDINATES: similar to AA sequence:RefSeq:WP_000492446.1
GO:0008150 - biological_process [Evidence IEA]
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_004780750.1
COORDINATES: similar to AA sequence:RefSeq:WP_020772498.1
COORDINATES: similar to AA sequence:RefSeq:WP_004471414.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_004500828.1
COORDINATES: similar to AA sequence:RefSeq:WP_004459616.1
COORDINATES: similar to AA sequence:RefSeq:WP_004434042.1
COORDINATES: similar to AA sequence:RefSeq:WP_010579238.1
COORDINATES: similar to AA sequence:RefSeq:WP_002179700.1
COORDINATES: similar to AA sequence:RefSeq:WP_000666143.1
COORDINATES: similar to AA sequence:RefSeq:WP_000578215.1
COORDINATES: similar to AA sequence:RefSeq:WP_011671341.1
COORDINATES: similar to AA sequence:RefSeq:WP_004426036.1
COORDINATES: similar to AA sequence:RefSeq:WP_017852352.1
COORDINATES: similar to AA sequence:RefSeq:WP_004757556.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010572434.1
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
ubiquinone/menaquinone biosynthesis methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_000721923.1
COORDINATES: similar to AA sequence:RefSeq:WP_000928205.1
GO:0070007 - glutamic-type endopeptidase activity [Evidence IEA]
PrsW family glutamic-type intramembrane protease
COORDINATES: similar to AA sequence:RefSeq:WP_004492250.1
COORDINATES: similar to AA sequence:RefSeq:WP_020767727.1
TraR/DksA family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004459639.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010572429.1
COORDINATES: similar to AA sequence:RefSeq:WP_017854007.1
COORDINATES: similar to AA sequence:RefSeq:WP_000689162.1
COORDINATES: similar to AA sequence:RefSeq:WP_002106973.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572425.1
COORDINATES: similar to AA sequence:RefSeq:WP_004500842.1
COORDINATES: similar to AA sequence:RefSeq:WP_002625067.1
COORDINATES: similar to AA sequence:RefSeq:WP_017851617.1
COORDINATES: similar to AA sequence:RefSeq:WP_002749670.1
bile acid:sodium symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020772528.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_004478808.1
COORDINATES: similar to AA sequence:RefSeq:WP_004764476.1
COORDINATES: similar to AA sequence:RefSeq:WP_016559519.1
COORDINATES: similar to AA sequence:RefSeq:WP_010679661.1
COORDINATES: similar to AA sequence:RefSeq:WP_000828542.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000094315.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: similar to AA sequence:RefSeq:WP_017852115.1
COORDINATES: similar to AA sequence:RefSeq:WP_020772491.1
COORDINATES: similar to AA sequence:RefSeq:WP_004506843.1
COORDINATES: similar to AA sequence:RefSeq:WP_017858254.1
TonB-dependent receptor plug domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004468691.1
COORDINATES: similar to AA sequence:RefSeq:WP_000177702.1
COORDINATES: similar to AA sequence:RefSeq:WP_003010252.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572405.1
COORDINATES: similar to AA sequence:RefSeq:WP_004428370.1
COORDINATES: similar to AA sequence:RefSeq:WP_001221437.1
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017861511.1
COORDINATES: similar to AA sequence:RefSeq:WP_000377734.1
UTP--glucose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002179870.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572399.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572397.1
COORDINATES: similar to AA sequence:RefSeq:WP_002736632.1
7TM diverse intracellular signaling domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_001151281.1
COORDINATES: similar to AA sequence:RefSeq:WP_000956229.1
COORDINATES: similar to AA sequence:RefSeq:WP_000659897.1
COORDINATES: similar to AA sequence:RefSeq:WP_017857701.1
COORDINATES: similar to AA sequence:RefSeq:WP_002617054.1
COORDINATES: similar to AA sequence:RefSeq:WP_016551207.1
COORDINATES: similar to AA sequence:RefSeq:WP_003010321.1
COORDINATES: similar to AA sequence:RefSeq:WP_004756455.1
COORDINATES: similar to AA sequence:RefSeq:WP_000626856.1
COORDINATES: similar to AA sequence:RefSeq:WP_004459693.1
COORDINATES: similar to AA sequence:RefSeq:WP_016757871.1
COORDINATES: similar to AA sequence:RefSeq:WP_010572373.1