Oryza sativa Japonica Group plastid, complete genome.
type: Entry
definition: Oryza sativa Japonica Group plastid, complete genome.
sequence version: NC_001320.1
sequence date: 2023-04-03
sequence: sequence
division: PLN
label: NC_001320.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: plastid Oryza sativa Japonica Group (Japanese rice)
organism: Oryza sativa Japonica Group
taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
reference: 1
references: 8252646
reference: 2
references: 1708498
reference: 3
references: 2770692
reference: 4
reference: 5
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence was derived from X15901.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000820
sequence length: 134525
topology: circular
so has quality: SO_0000988
location: 1..134525
location: region:1-134525:1
RO_0002162: 39947

NC_001320
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: A chloroplast DNA mutational hotspot and gene conversion in a noncoding region near rbcL in the grass family (Poaceae)
author: Morton, B.R.
author: Clegg, M.T.
journal: Curr. Genet.
volume: 24
issue: 4
pages: 357-365
year: 1993
pubmed: 8252646

8252646
type: PubMed
SIO_000068: pubmed

2
title: Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes
author: Shimada, H.
author: Sugiura, M.
journal: Nucleic Acids Res.
volume: 19
issue: 5
pages: 983-995
year: 1991
pubmed: 1708498

1708498
type: PubMed
SIO_000068: pubmed

3
title: The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals
author: Hiratsuka, J.
author: Shimada, H.
author: Whittier, R.
author: Ishibashi, T.
author: Sakamoto, M.
author: Mori, M.
author: Kondo, C.
author: Honji, Y.
author: Sun, C.R.
author: Meng, B.Y.
author: Li, Y.Q.
author: Kanno, A.
author: Nishizawa, Y.
author: Hirai, A.
author: Shinozaki, K.
author: Sugiura, M.
journal: Mol. Gen. Genet. 217 (2-3), 185-194 (1989)
pubmed: 2770692

2770692
type: PubMed
SIO_000068: pubmed

4
title: Direct Submission
journal: Submitted (24-SEP-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

5
title: Direct Submission
author: Sugiura, M.
journal: Submitted (18-JUL-1989) Sugiura M., Centre for Gene Research, Nagoya University, Chikusa Nagoya 464-01, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134525:1
position: 134525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-134525:1:source
so part of: sequence
organism: Oryza sativa Japonica Group
organelle: plastid
mol type: genomic DNA
cultivar: Nipponbare

39947
type: Taxonomy
SIO_000068: taxonomy

OrsajCp001
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rps12
locus tag: OrsajCp001
trans splicing: true
so part of: sequence
location: complement(join(88473..89273,67390..67503))
location: region:67390-89273:-1
so has part: feature:67390-67503:-1:exon
so has part: feature:88473-89273:-1:exon
subclass of: SO_0000010

3131499
type: Gene
SIO_000068: ncbigene

position:67390:-1
position: 67390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89273:-1
position: 89273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67390-67503:-1:exon

position:67503:-1
position: 67503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88473-89273:-1:exon

position:88473:-1
position: 88473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OrsajCp001
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rps12
locus tag: OrsajCp001
codon start: 1
transl table: 11
product: ribosomal protein S12
translation: MPTVKQLIRNARQPIRNARKSAALKGCPQRRGTCARVYTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYRIIRGALDAVAVKNRQQGRSKYGVKKPKK
SIO_010081: OrsajCp001
subclass of: SO_0000673
so part of: OrsajCp001
location: complement(join(88473..88501,89042..89273,67390..67503))
location: region:67390-89273:-1
so has part: feature:67390-67503:-1:exon
so has part: feature:89042-89273:-1:exon
so has part: feature:88473-88501:-1:exon

NP_039359.1
type: Protein
SIO_000068: ncbiprotein

P12149
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:67390-67503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89042-89273:-1:exon

position:89042:-1
position: 89042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88473-88501:-1:exon

position:88501:-1
position: 88501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OrsajCp002
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psbA
locus tag: OrsajCp002
so part of: sequence
location: complement(82..1143)
location: region:82-1143:-1
so has part: feature:82-1143:-1:exon
subclass of: SO_0000010

3131409
type: Gene
SIO_000068: ncbigene

position:82:-1
position: 82
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143:-1
position: 1143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82-1143:-1:exon

OrsajCp002
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psbA
locus tag: OrsajCp002
codon start: 1
transl table: 11
product: photosystem II protein D1
translation: MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAALEVPSLNG
SIO_010081: OrsajCp002
subclass of: SO_0000673
so part of: OrsajCp002
location: complement(82..1143)
location: region:82-1143:-1
so has part: feature:82-1143:-1:exon

NP_039360.1
type: Protein
SIO_000068: ncbiprotein

P12094
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:82-1143:-1:exon

OrsajCt121
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: trnK
locus tag: OrsajCt121
so part of: sequence
location: complement(1363..3938)
location: region:1363-3938:-1
so has part: feature:1363-3938:-1:exon
subclass of: SO_0000663

3131339
type: Gene
SIO_000068: ncbigene

position:1363:-1
position: 1363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3938:-1
position: 3938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1363-3938:-1:exon

OrsajCt121
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
gene: trnK
locus tag: OrsajCt121
product: tRNA-Lys
note: trnK(UUU)
SIO_010081: OrsajCt121
subclass of: SO_0000673
so part of: OrsajCt121
location: complement(join(1363..1397,3902..3938))
location: region:1363-3938:-1
so has part: feature:3902-3938:-1:exon
so has part: feature:1363-1397:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3902-3938:-1:exon

position:3902:-1
position: 3902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1363-1397:-1:exon

position:1397:-1
position: 1397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OrsajCp003
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: matK
locus tag: OrsajCp003
so part of: sequence
location: complement(1668..3203)
location: region:1668-3203:-1
so has part: feature:1668-3203:-1:exon
subclass of: SO_0000010

3131450
type: Gene
SIO_000068: ncbigene

position:1668:-1
position: 1668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3203:-1
position: 3203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1668-3203:-1:exon

OrsajCp003
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: matK
locus tag: OrsajCp003
note: ORF542; ORF within trnK intron
codon start: 1
transl table: 11
product: maturase K
translation: MEKFEGYSEKLKFPRQYFVYPLLFQEYIYVFAHDYGLNGSELVEIIGSNNKKFSSLLVKRLMIRMYQQNFWINLVNHPNQDRLLDYNNFFYSEFYSQILSEGFAIVVEIPFSLREQSCPEEKEIPKFQNLRSIHSIFPFLEDKFLHLHYLAHIEIPYPIHLDILLQLLQYRIQDVPSLHLLRFFLNYYSNWNSFITSMKSIFILKKENKRLFRFLYNSYVSEYEFFLLFLRKQSSCLRLTSSGTFLERIIFSRKMEHFGLMYPAFFRKTIWFVMDPLMHYVRYQGKAILASKGTLLLKKKWKCYLVRLWQYSFSFWTQPQRIHLNQLENSCFDFLGYFSSVPINSLLVRNQMLENSFLIDTQMKKFDTKVPVTPLIGSLAKAQFCTGSGHPISKPIWTDLSDWDILDRFGRICRNLFHYHSGSSKKKTLYRLKYILRLSCARTLARKHKSTVRAFMQWLGSVFLEEFFTEEEQVFSLMFAKTTYFSFRGSHSERIWYLDILRINDLVNPLN
SIO_010081: OrsajCp003
subclass of: SO_0000673
so part of: OrsajCp003
location: complement(1668..3203)
location: region:1668-3203:-1
so has part: feature:1668-3203:-1:exon

NP_039361.2
type: Protein
SIO_000068: ncbiprotein

P12175
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:1668-3203:-1:exon

OrsajCp004
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rps16
locus tag: OrsajCp004
so part of: sequence
location: complement(4487..5553)
location: region:4487-5553:-1
so has part: feature:4487-5553:-1:exon
subclass of: SO_0000010

3131439
type: Gene
SIO_000068: ncbigene

position:4487:-1
position: 4487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5553:-1
position: 5553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4487-5553:-1:exon

OrsajCp004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rps16
locus tag: OrsajCp004
codon start: 1
transl table: 11
product: ribosomal protein S16
translation: MLKLRLKRCGRKQRFYDPIKNQTCLNVPAILYFLEKGAQPTRTVSDILRKAEFFKEKERTLS
SIO_010081: OrsajCp004
subclass of: SO_0000673
so part of: OrsajCp004
location: complement(join(4487..4635,5514..5553))
location: region:4487-5553:-1
so has part: feature:5514-5553:-1:exon
so has part: feature:4487-4635:-1:exon

NP_039362.1
type: Protein
SIO_000068: ncbiprotein

P12151
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:5514-5553:-1:exon

position:5514:-1
position: 5514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4487-4635:-1:exon

position:4635:-1
position: 4635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OrsajCp004
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: rps16
locus tag: OrsajCp004
number: 2
SIO_010081: OrsajCp004
subclass of: SO_0000673
so part of: OrsajCp004
location: complement(4487..4635)
location: region:4487-4635:-1
so has part: feature:4487-4635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4487-4635:-1:exon

OrsajCp004
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: rps16
locus tag: OrsajCp004
number: 1
SIO_010081: OrsajCp004
subclass of: SO_0000673
so part of: OrsajCp004
location: complement(5514..5553)
location: region:5514-5553:-1
so has part: feature:5514-5553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5514-5553:-1:exon

OrsajCt122
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt122
so part of: sequence
location: complement(6615..6687)
location: region:6615-6687:-1
so has part: feature:6615-6687:-1:exon
subclass of: SO_0000663

3131340
type: Gene
SIO_000068: ncbigene

position:6615:-1
position: 6615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6687:-1
position: 6687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6615-6687:-1:exon

OrsajCt122
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt122
product: tRNA-Gln
note: trnQ; tRNA-Gln(UUG)
SIO_010081: OrsajCt122
subclass of: SO_0000673
so part of: OrsajCt122
location: complement(6615..6687)
location: region:6615-6687:-1
so has part: feature:6615-6687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6615-6687:-1:exon

OrsajCp005
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psbK
locus tag: OrsajCp005
so part of: sequence
location: 7033..7218
location: region:7033-7218:1
so has part: feature:7033-7218:1:exon
subclass of: SO_0000010

3131417
type: Gene
SIO_000068: ncbigene

position:7033:1
position: 7033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7218:1
position: 7218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7033-7218:1:exon

OrsajCp005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psbK
locus tag: OrsajCp005
note: PSII K protein
codon start: 1
transl table: 11
product: photosystem II protein K
translation: MPNILSLTCICFNSVIYPTSFFFAKLPEAYAIFNPIVDFMPVIPVLFFLLAFVWQAAVSFR
SIO_010081: OrsajCp005
subclass of: SO_0000673
so part of: OrsajCp005
location: 7033..7218
location: region:7033-7218:1
so has part: feature:7033-7218:1:exon

NP_039363.1
type: Protein
SIO_000068: ncbiprotein

P12162
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:7033-7218:1:exon

OrsajCp006
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psbI
locus tag: OrsajCp006
so part of: sequence
location: 7608..7718
location: region:7608-7718:1
so has part: feature:7608-7718:1:exon
subclass of: SO_0000010

3131416
type: Gene
SIO_000068: ncbigene

position:7608:1
position: 7608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7718:1
position: 7718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7608-7718:1:exon

OrsajCp006
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psbI
locus tag: OrsajCp006
codon start: 1
transl table: 11
product: photosystem II protein I
translation: MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRDE
SIO_010081: OrsajCp006
subclass of: SO_0000673
so part of: OrsajCp006
location: 7608..7718
location: region:7608-7718:1
so has part: feature:7608-7718:1:exon

NP_039364.1
type: Protein
SIO_000068: ncbiprotein

P12161
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:7608-7718:1:exon

OrsajCt123
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt123
so part of: sequence
location: complement(7829..7916)
location: region:7829-7916:-1
so has part: feature:7829-7916:-1:exon
subclass of: SO_0000663

3131341
type: Gene
SIO_000068: ncbigene

position:7829:-1
position: 7829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7916:-1
position: 7916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7829-7916:-1:exon

OrsajCt123
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt123
product: tRNA-Ser
note: trnS; tRNA-Ser(GCU)
SIO_010081: OrsajCt123
subclass of: SO_0000673
so part of: OrsajCt123
location: complement(7829..7916)
location: region:7829-7916:-1
so has part: feature:7829-7916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7829-7916:-1:exon

OrsajCp007
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp007
so part of: sequence
location: 8349..8651
location: region:8349-8651:1
so has part: feature:8349-8651:1:exon
subclass of: SO_0000010

3131451
type: Gene
SIO_000068: ncbigene

position:8349:1
position: 8349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8651:1
position: 8651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8349-8651:1:exon

OrsajCp007
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp007
note: ORF100
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLYKWIFLYFLRLRPRKARISRYLLFHILVTRCSIGIRRNRNPFPLHIKMDFESQFFFSISLLFFRILFLFLYPCNRERVGKGRLLFFIFSLKNRLSWK
SIO_010081: OrsajCp007
subclass of: SO_0000673
so part of: OrsajCp007
location: 8349..8651
location: region:8349-8651:1
so has part: feature:8349-8651:1:exon

NP_039365.1
type: Protein
SIO_000068: ncbiprotein

Q32758
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:8349-8651:1:exon

OrsajCp008
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psbD
locus tag: OrsajCp008
so part of: sequence
location: 8900..9961
location: region:8900-9961:1
so has part: feature:8900-9961:1:exon
subclass of: SO_0000010

3131412
type: Gene
SIO_000068: ncbigene

position:8900:1
position: 8900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9961:1
position: 9961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8900-9961:1:exon

OrsajCp008
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psbD
locus tag: OrsajCp008
codon start: 1
transl table: 11
product: photosystem II protein D2
translation: MTIALGRVTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFALIGFMLRQFELARSVQLRPYNAISFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
SIO_010081: OrsajCp008
subclass of: SO_0000673
so part of: OrsajCp008
location: 8900..9961
location: region:8900-9961:1
so has part: feature:8900-9961:1:exon

NP_039366.1
type: Protein
SIO_000068: ncbiprotein

P12095
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:8900-9961:1:exon

OrsajCp009
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psbC
locus tag: OrsajCp009
so part of: sequence
location: 9909..11330
location: region:9909-11330:1
so has part: feature:9909-11330:1:exon
subclass of: SO_0000010

3131411
type: Gene
SIO_000068: ncbigene

position:9909:1
position: 9909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11330:1
position: 11330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9909-11330:1:exon

OrsajCp009
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psbC
locus tag: OrsajCp009
note: PSII 43 kDa protein; CP43
codon start: 1
transl table: 11
product: photosystem II 44 kDa protein
translation: MKILYSLRRFYHVETLFNGTFVLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVLDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVLKALYFGGIYDTWAPGGGDVRKITNLTLSPGVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGFICVFGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDLEPVLYMTPLN
SIO_010081: OrsajCp009
subclass of: SO_0000673
so part of: OrsajCp009
location: 9909..11330
location: region:9909-11330:1
so has part: feature:9909-11330:1:exon

NP_039367.1
type: Protein
SIO_000068: ncbiprotein

P12158
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:9909-11330:1:exon

OrsajCt124
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt124
so part of: sequence
location: complement(11503..11590)
location: region:11503-11590:-1
so has part: feature:11503-11590:-1:exon
subclass of: SO_0000663

3131342
type: Gene
SIO_000068: ncbigene

position:11503:-1
position: 11503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11590:-1
position: 11590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11503-11590:-1:exon

OrsajCt124
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt124
product: tRNA-Ser
note: trnS; tRNA-Ser(UGA)
SIO_010081: OrsajCt124
subclass of: SO_0000673
so part of: OrsajCt124
location: complement(11503..11590)
location: region:11503-11590:-1
so has part: feature:11503-11590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11503-11590:-1:exon

OrsajCp010
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psbZ
locus tag: OrsajCp010
so part of: sequence
location: 11937..12125
location: region:11937-12125:1
so has part: feature:11937-12125:1:exon
subclass of: SO_0000010

3131452
type: Gene
SIO_000068: ncbigene

position:11937:1
position: 11937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12125:1
position: 12125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11937-12125:1:exon

OrsajCp010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psbZ
locus tag: OrsajCp010
note: photosystem II reaction center Z protein; YCF9
codon start: 1
transl table: 11
product: photosystem II protein Z
translation: MTIAFQLAVFALIVTSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVFLVAILNSLIS
SIO_010081: OrsajCp010
subclass of: SO_0000673
so part of: OrsajCp010
location: 11937..12125
location: region:11937-12125:1
so has part: feature:11937-12125:1:exon

NP_039368.1
type: Protein
SIO_000068: ncbiprotein

P12194
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:11937-12125:1:exon

OrsajCt125
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt125
so part of: sequence
location: 12331..12401
location: region:12331-12401:1
so has part: feature:12331-12401:1:exon
subclass of: SO_0000663

3131343
type: Gene
SIO_000068: ncbigene

position:12331:1
position: 12331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12401:1
position: 12401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12331-12401:1:exon

OrsajCt125
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt125
product: tRNA-Gly
note: trnG; tRNA-Gly(GCC)
SIO_010081: OrsajCt125
subclass of: SO_0000673
so part of: OrsajCt125
location: 12331..12401
location: region:12331-12401:1
so has part: feature:12331-12401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12331-12401:1:exon

OrsajCt126
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: trnG
locus tag: OrsajCt126
pseudo: true
so part of: sequence
location: complement(12528..12601)
location: region:12528-12601:-1
so has part: feature:12528-12601:-1:exon

3131447
type: Gene
SIO_000068: ncbigene

position:12528:-1
position: 12528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12601:-1
position: 12601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12528-12601:-1:exon

OrsajCt127
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt127
so part of: sequence
location: complement(12839..12912)
location: region:12839-12912:-1
so has part: feature:12839-12912:-1:exon
subclass of: SO_0000663

3131344
type: Gene
SIO_000068: ncbigene

position:12839:-1
position: 12839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12912:-1
position: 12912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12839-12912:-1:exon

OrsajCt127
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt127
product: tRNA-Met
note: trnfM; tRNA-fMet(CAU)
SIO_010081: OrsajCt127
subclass of: SO_0000673
so part of: OrsajCt127
location: complement(12839..12912)
location: region:12839-12912:-1
so has part: feature:12839-12912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12839-12912:-1:exon

OrsajCt128
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt128
so part of: sequence
location: complement(13729..13752)
location: region:13729-13752:-1
so has part: feature:13729-13752:-1:exon
subclass of: SO_0000663

3131345
type: Gene
SIO_000068: ncbigene

position:13729:-1
position: 13729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13752:-1
position: 13752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13729-13752:-1:exon

OrsajCt128
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt128
product: tRNA-Gly
note: trnG; tRNA-Gly(UCC)
SIO_010081: OrsajCt128
subclass of: SO_0000673
so part of: OrsajCt128
location: complement(13729..13752)
location: region:13729-13752:-1
so has part: feature:13729-13752:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13729-13752:-1:exon

OrsajCp011
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp011
so part of: sequence
location: complement(14077..14346)
location: region:14077-14346:-1
so has part: feature:14077-14346:-1:exon
subclass of: SO_0000010

3131453
type: Gene
SIO_000068: ncbigene

position:14077:-1
position: 14077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14346:-1
position: 14346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14077-14346:-1:exon

OrsajCp011
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp011
note: ORF91
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVYGYGKSNMPHPNRKRKGTDTQYDYWEELLVMVSGLYVLFCVFLVLFIFFDSFKQESNKLELSGKEEKKKLNGENRLSRDIQNLLYIK
SIO_010081: OrsajCp011
subclass of: SO_0000673
so part of: OrsajCp011
location: complement(14077..14346)
location: region:14077-14346:-1
so has part: feature:14077-14346:-1:exon

NP_039369.1
type: Protein
SIO_000068: ncbiprotein

Q32759
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:14077-14346:-1:exon

OrsajCt129
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: trnI
locus tag: OrsajCt129
pseudo: true
so part of: sequence
location: 14188..14263
location: region:14188-14263:1
so has part: feature:14188-14263:1:exon

3131448
type: Gene
SIO_000068: ncbigene

position:14188:1
position: 14188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14263:1
position: 14263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14188-14263:1:exon

OrsajCp012
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp012
so part of: sequence
location: complement(14571..14783)
location: region:14571-14783:-1
so has part: feature:14571-14783:-1:exon
subclass of: SO_0000010

3131454
type: Gene
SIO_000068: ncbigene

position:14571:-1
position: 14571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14783:-1
position: 14783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14571-14783:-1:exon

OrsajCp012
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp012
note: ORF70
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTFSIYVLFPLIGWGINEFAPFIYPYGWVLIFSDILLVCFGERLKQFLTGIPWKNLRVQNFAIFLKRIC
SIO_010081: OrsajCp012
subclass of: SO_0000673
so part of: OrsajCp012
location: complement(14571..14783)
location: region:14571-14783:-1
so has part: feature:14571-14783:-1:exon

NP_039370.1
type: Protein
SIO_000068: ncbiprotein

Q32760
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:14571-14783:-1:exon

OrsajCt130
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt130
so part of: sequence
location: 15060..15131
location: region:15060-15131:1
so has part: feature:15060-15131:1:exon
subclass of: SO_0000663

3131346
type: Gene
SIO_000068: ncbigene

position:15060:1
position: 15060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15131:1
position: 15131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15060-15131:1:exon

OrsajCt130
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt130
product: tRNA-Thr
note: trnT; tRNA-Thr(GGU)
SIO_010081: OrsajCt130
subclass of: SO_0000673
so part of: OrsajCt130
location: 15060..15131
location: region:15060-15131:1
so has part: feature:15060-15131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15060-15131:1:exon

OrsajCt131
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: trnT
locus tag: OrsajCt131
pseudo: true
so part of: sequence
location: 15128..15200
location: region:15128-15200:1
so has part: feature:15128-15200:1:exon

3131449
type: Gene
SIO_000068: ncbigene

position:15128:1
position: 15128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15200:1
position: 15200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15128-15200:1:exon

OrsajCt132
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt132
so part of: sequence
location: 15650..15722
location: region:15650-15722:1
so has part: feature:15650-15722:1:exon
subclass of: SO_0000663

3131347
type: Gene
SIO_000068: ncbigene

position:15650:1
position: 15650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15722:1
position: 15722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15650-15722:1:exon

OrsajCt132
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt132
product: tRNA-Glu
note: trnE; tRNA-Glu(UCC)
SIO_010081: OrsajCt132
subclass of: SO_0000673
so part of: OrsajCt132
location: 15650..15722
location: region:15650-15722:1
so has part: feature:15650-15722:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15650-15722:1:exon

OrsajCt133
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt133
so part of: sequence
location: 15784..15867
location: region:15784-15867:1
so has part: feature:15784-15867:1:exon
subclass of: SO_0000663

3131348
type: Gene
SIO_000068: ncbigene

position:15784:1
position: 15784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15867:1
position: 15867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15784-15867:1:exon

OrsajCt133
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt133
product: tRNA-Tyr
note: trnY; tRNA-Tyr(GUA)
SIO_010081: OrsajCt133
subclass of: SO_0000673
so part of: OrsajCt133
location: 15784..15867
location: region:15784-15867:1
so has part: feature:15784-15867:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15784-15867:1:exon

OrsajCt134
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt134
so part of: sequence
location: 16231..16304
location: region:16231-16304:1
so has part: feature:16231-16304:1:exon
subclass of: SO_0000663

3131349
type: Gene
SIO_000068: ncbigene

position:16231:1
position: 16231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16304:1
position: 16304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16231-16304:1:exon

OrsajCt134
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt134
product: tRNA-Asp
note: trnD; tRNA-Asp(GUC)
SIO_010081: OrsajCt134
subclass of: SO_0000673
so part of: OrsajCt134
location: 16231..16304
location: region:16231-16304:1
so has part: feature:16231-16304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16231-16304:1:exon

OrsajCp013
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psbM
locus tag: OrsajCp013
so part of: sequence
location: 16685..16789
location: region:16685-16789:1
so has part: feature:16685-16789:1:exon
subclass of: SO_0000010

3131419
type: Gene
SIO_000068: ncbigene

position:16685:1
position: 16685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16789:1
position: 16789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16685-16789:1:exon

OrsajCp013
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psbM
locus tag: OrsajCp013
codon start: 1
transl table: 11
product: photosystem II protein M
translation: MEVNILAFIATALFILVPTAFLLIIYVKTVSQND
SIO_010081: OrsajCp013
subclass of: SO_0000673
so part of: OrsajCp013
location: 16685..16789
location: region:16685-16789:1
so has part: feature:16685-16789:1:exon

NP_039371.1
type: Protein
SIO_000068: ncbiprotein

P12169
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:16685-16789:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 39947
rpt type: inverted
so part of: sequence
location: 16880..16927
location: region:16880-16927:1
so has part: feature:16880-16927:1:region

position:16880:1
position: 16880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16927:1
position: 16927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16880-16927:1:region

OrsajCp014
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
alternative label: ycf6
gene: petN
locus tag: OrsajCp014
gene synonym: ycf6
so part of: sequence
location: complement(17556..17645)
location: region:17556-17645:-1
so has part: feature:17556-17645:-1:exon
subclass of: SO_0000010

3131455
type: Gene
SIO_000068: ncbigene

position:17556:-1
position: 17556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17645:-1
position: 17645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17556-17645:-1:exon

OrsajCp014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
alternative label: ycf6
gene: petN
locus tag: OrsajCp014
gene synonym: ycf6
note: cytochrome b6/f complex subunit N
codon start: 1
transl table: 11
product: cytochrome b6/f complex subunit VIII
translation: MDIVSLAWAALMVVFTFSLSLVVWGRSGL
SIO_010081: OrsajCp014
subclass of: SO_0000673
so part of: OrsajCp014
location: complement(17556..17645)
location: region:17556-17645:-1
so has part: feature:17556-17645:-1:exon

NP_039372.1
type: Protein
SIO_000068: ncbiprotein

P12178
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:17556-17645:-1:exon

OrsajCt135
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt135
so part of: sequence
location: complement(18059..18129)
location: region:18059-18129:-1
so has part: feature:18059-18129:-1:exon
subclass of: SO_0000663

3131350
type: Gene
SIO_000068: ncbigene

position:18059:-1
position: 18059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18129:-1
position: 18129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18059-18129:-1:exon

OrsajCt135
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt135
product: tRNA-Cys
note: trnC; tRNA-Cys(GCA)
SIO_010081: OrsajCt135
subclass of: SO_0000673
so part of: OrsajCt135
location: complement(18059..18129)
location: region:18059-18129:-1
so has part: feature:18059-18129:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18059-18129:-1:exon

OrsajCp015
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rpoB
locus tag: OrsajCp015
so part of: sequence
location: 19214..22441
location: region:19214-22441:1
so has part: feature:19214-22441:1:exon
subclass of: SO_0000010

3131432
type: Gene
SIO_000068: ncbigene

position:19214:1
position: 19214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22441:1
position: 22441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19214-22441:1:exon

OrsajCp015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rpoB
locus tag: OrsajCp015
note: RNA polymerase beta chain; one of four subunits of the minimal PEP RNA polymerase catalytic core
codon start: 1
transl table: 11
product: RNA polymerase beta subunit
translation: MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEELEKFPTIKDPDHEISFQLFAKGYQLLEPSIKERDAVYESLTYSSELYVSARLIFGFDVQKQTISIGNIPIMNSLGTFIINGIYRIVINQILLSPGIYYRSELDHKGISIYTGTIISDWGGRSELAIDKKERIWARVSRKQKISILVLSSAMGSNLKEILDNVSYPEIFLSFPNAKEKKRIESKEKAILEFYQQFACVGGDLVFSESLCEELQKKFFQQKCELGRIGRRNMNRRLNLDIPQNSTFLLPRDVLAATDHLIGMKFETGILDDDDMNHLKNKRIRSVADLLQDQFGLALGRLQHAVQKTIRRVFIRQSKPTPQTLVTPTSTSILLITTYETFFGTYPLSQVFDQTNPLTQTVHGRKVSCLGPGGLTGRTASFRSRDIHPSHYGRICPIDTSEGINVGLTGSLAIHARIDHWWGSVESPFYEISEKAKKKKERQVVYLSPNRDEYYMIAAGNSLSLNRGIQEEQVVPARYRQEFLTIAWEQIHVRSIFPFQYFSIGGSLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSRVSVIAEREGKIISTNSHKILLSSSGKTISIPLVTHRRSNKNTCMHQKPRVPRGKSIKKGQILAEGAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTDTTSQGSAEKITKEIPHLEEHLLRNLDRNGVVKLGSWVETGDILVGKLTPQIASESSYIAEAGLLRAIFGLEVSTSKETSLKLPIGGRGRVIDVKWIQRDPLDIMVRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFESSLGLAGDLLKKHYRIAPFDERYEQEASRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYILKLIHQVDEKIHGRSTGPYSLVTQQPVRGRAKQGGQRIGEMEVWALEGFGVAHILQEILTYKSDHLIARQEILNATIWGKRVPNHEDPPESFRVLVRELRSLALELNHFLVSQKNFQVNREEV
SIO_010081: OrsajCp015
subclass of: SO_0000673
so part of: OrsajCp015
location: 19214..22441
location: region:19214-22441:1
so has part: feature:19214-22441:1:exon

NP_039373.1
type: Protein
SIO_000068: ncbiprotein

P12091
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:19214-22441:1:exon

OrsajCp016
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rpoC1
locus tag: OrsajCp016
so part of: sequence
location: 22479..24527
location: region:22479-24527:1
so has part: feature:22479-24527:1:exon
subclass of: SO_0000010

3131433
type: Gene
SIO_000068: ncbigene

position:22479:1
position: 22479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24527:1
position: 24527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22479-24527:1:exon

OrsajCp016
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rpoC1
locus tag: OrsajCp016
note: RNA polymerase beta' chain
codon start: 1
transl table: 11
product: RNA polymerase beta' subunit
translation: MIDQYKHQQLQIGLVSPQQIKAWANKTLPNGEVVGEVTRPSTFHYKTDKPEKDGLFCERIFGPIKSRICACGNSRASGAENEDERFCQKCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKGLPSYIANLLDKPLKKLEGLVYGDFSFARPSAKKPTFLRLRGLFEDEISSCNHSISPFFSTPGFTTFRNREIATGAGAIREQLADLDLRIILENSSVEWKELEDEGYSGDEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAYLLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPTRDGHNKVYKSLSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPLEIAIKLFQLFVIRDLITKRATSNVRIAKRKIWEKEPIVWEILQEVMRGHPVLLNRAPTLHRLGIQAFQPTLVEGRTICLHPLVCKGFNADFDGDQMAVHLPLSLEAQAEARLLMFSHMNLLSPAIGDPICVPTQDMLIGLYVLTIGNRRGICANRYNSCGNYPNQKVNYNNNNPKYTKDKESLFSSSYDALGAYRQKQICLDSPLWLRWKLDQRVIGLREVPIEVQYESLGTYREIYAHYLVVGNRKKEIRSIYIRTTLGHISFYREIEEAIQGFSQAYSYTI
SIO_010081: OrsajCp016
subclass of: SO_0000673
so part of: OrsajCp016
location: 22479..24527
location: region:22479-24527:1
so has part: feature:22479-24527:1:exon

NP_039374.1
type: Protein
SIO_000068: ncbiprotein

P12092
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:22479-24527:1:exon

OrsajCp017
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rpoC2
locus tag: OrsajCp017
so part of: sequence
location: 24727..29268
location: region:24727-29268:1
so has part: feature:24727-29268:1:exon
subclass of: SO_0000010

3131434
type: Gene
SIO_000068: ncbigene

position:24727:1
position: 24727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29268:1
position: 29268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24727-29268:1:exon

OrsajCp017
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rpoC2
locus tag: OrsajCp017
note: one of four subunits of the minimal PEP RNA polymerase catalytic core
codon start: 1
transl table: 11
product: RNA polymerase beta'' subunit
translation: MAERANLVFQNKEIDGTAMKRLISRLIDHFGMGYTSHILDQIKTLGFHQATTTSISLGIEDLLTIPSKGWLVQDAEQQSFLLEKHYYYGAVHAVEKLRQSVEIWYATSEYLKHEMNSNFRITDPSNPVYLMSFSGARGNASQVHQLVGMRGLMADPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTADAGYLTRRLVEVVQHIIVRRRDCGTIQAISVSPQNGMTEKLFVQTLIGRVLANDIYIGSRCIATRNQDIGIGLVNRFITTFRAQPFRAQPIYIRTPFTCRSTSWICQLCYGRSSTHGDLVELGEAVGVIAGQSIGEPGTQLTLRTFHTGGVFTGGTADLVRSPSNGKIQFNGDLVHPTRTRHGQPAFLCYIDLHITIQSQDILHSVTIPSKSLILVQNDQYVESEQVIAEIRAGTSALHFKEKVQKHIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCRSSIASFSLHKDQDQMNTYSFSVDGRYIFGLSMADDEVRHRLLDTFGKKDREILDYSTPDRIMSNGHWNFVYPSILQNNFDLLAKKRRNRFAIPLQYHQEQEKEPISCFGISIEIPFMGVLRRNTIVAYFDDPRYKKDKKGSGIVKFRYRTLEDEYRTREKDSENEYGSPENEYRTREEECKTLEDEYRTREEEYETLEDEYGIPENEYETLEDEYGILEDEYRTREEESEDEYGSPENKYRPREDKYGTLEEDSEDEHGTLEEDSEEDSEDEYGNPEEDSVLKKGVLIEHRGTKEFSLKYQKEVDRFFFILQELHILPRSSSLKVLDNSIIGVDTQLTKNTRSRLGGLVRVKRKKSHTELKIFSGDIHFPEEADKILGGSLIPLEREKKDSKESKKRENWVYVQWKKILKSKEKYFVLVRPAVAYEMNEGRNLATLFPQDLFEEEGNLQLRLVNFISHENSKLTQRIYHTNSQFVRTCLVLNWEQEEKEEARASLVEIRANGLIRDFLRIGLIKSTISYTRKRYDSRSAGLILHNRLDRTNTNSFYSKAKIQSLSQHQEAIGTLLNRNKEYQSLMVLSASNCSRIGFFKNSKNPNGVKESNPRIPIPKFWGLFRNFSGLLGTIAPSISNFSSSYYLLTYNQILLKKHLLLDNLKQNFKVLQGLKHSLINENQRTSNFDSNIMLDPFQLNWHFLPHDSWEETSAKIHLGQFICENVCLFKSHIKKSGQIFIVNIDSFVIRAAKPYLATTGATVHGHYGEILYKGDRLVTFIYEKARSSDITQGLPKVEQIFEARSIDSLSPNLERRIEDWNERIPRILGGPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIIRQVTSKVRVSEDGMSNVFSPGELIGLLRAERAGRALDESIYYRAILLGITRVSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRYPQNKNLYFEIQKKKLFASEMRDILFLHTELVSSDSDVTNNFYETSESPFTPFI
SIO_010081: OrsajCp017
subclass of: SO_0000673
so part of: OrsajCp017
location: 24727..29268
location: region:24727-29268:1
so has part: feature:24727-29268:1:exon

NP_039375.1
type: Protein
SIO_000068: ncbiprotein

P12093
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:24727-29268:1:exon

OrsajCp018
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rps2
locus tag: OrsajCp018
so part of: sequence
location: 29540..30250
location: region:29540-30250:1
so has part: feature:29540-30250:1:exon
subclass of: SO_0000010

3131442
type: Gene
SIO_000068: ncbigene

position:29540:1
position: 29540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30250:1
position: 30250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29540-30250:1:exon

OrsajCp018
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rps2
locus tag: OrsajCp018
note: 30S ribosomal protein S2
codon start: 1
transl table: 11
product: ribosomal protein S2
translation: MTRRYWNINLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAASQGKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMEKFHHLPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTISLADTNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRSLYIRNH
SIO_010081: OrsajCp018
subclass of: SO_0000673
so part of: OrsajCp018
location: 29540..30250
location: region:29540-30250:1
so has part: feature:29540-30250:1:exon

NP_039376.1
type: Protein
SIO_000068: ncbiprotein

P12145
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:29540-30250:1:exon

OrsajCp019
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: atpI
locus tag: OrsajCp019
so part of: sequence
location: 30501..31244
location: region:30501-31244:1
so has part: feature:30501-31244:1:exon
subclass of: SO_0000010

3131393
type: Gene
SIO_000068: ncbigene

position:30501:1
position: 30501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31244:1
position: 31244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30501-31244:1:exon

OrsajCp019
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: atpI
locus tag: OrsajCp019
note: ATPase IV subunit; ATP synthase CF0 A chain
codon start: 1
transl table: 11
product: ATP synthase CF0 A subunit
translation: MNIIPCSIKTLKGLYDISGVEVGQHFYWQIGGFQIHAQVLITSWVVITILLGSVIIAVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLSYFEKYIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH
SIO_010081: OrsajCp019
subclass of: SO_0000673
so part of: OrsajCp019
location: 30501..31244
location: region:30501-31244:1
so has part: feature:30501-31244:1:exon

NP_039377.1
type: Protein
SIO_000068: ncbiprotein

P12083
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:30501-31244:1:exon

OrsajCp020
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: atpH
locus tag: OrsajCp020
so part of: sequence
location: 32039..32284
location: region:32039-32284:1
so has part: feature:32039-32284:1:exon
subclass of: SO_0000010

3131392
type: Gene
SIO_000068: ncbigene

position:32039:1
position: 32039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32284:1
position: 32284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32039-32284:1:exon

OrsajCp020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: atpH
locus tag: OrsajCp020
note: ATPase III subunit; ATP synthase CF0 C chain
codon start: 1
transl table: 11
product: ATP synthase CF0 C subunit
translation: MNPLIAAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV
SIO_010081: OrsajCp020
subclass of: SO_0000673
so part of: OrsajCp020
location: 32039..32284
location: region:32039-32284:1
so has part: feature:32039-32284:1:exon

NP_039378.1
type: Protein
SIO_000068: ncbiprotein

P00843
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:32039-32284:1:exon

OrsajCp021
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: atpF
locus tag: OrsajCp021
so part of: sequence
location: 32741..34111
location: region:32741-34111:1
so has part: feature:32741-34111:1:exon
subclass of: SO_0000010

3131391
type: Gene
SIO_000068: ncbigene

position:32741:1
position: 32741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34111:1
position: 34111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32741-34111:1:exon

OrsajCp021
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: atpF
locus tag: OrsajCp021
note: ATPase subunit I
codon start: 1
transl table: 11
product: ATP synthase CF0 B subunit
translation: MKNVTHSFVFLAHWPSAGSFGLNTDILATNLINLTVVVGVLIYFGKGVLKDLLDNRKQRILSTIRNSEELRRGTIEQLEKARIRLQKVELEADEYRMNGYSEIEREKANLINATSISLEQLEKSKNETLYFEKQRAMNQVRQRVFQQAVQGALGTLNSCLNTELHFRTIRANISILGAME
SIO_010081: OrsajCp021
subclass of: SO_0000673
so part of: OrsajCp021
location: join(32741..32885,33714..34111)
location: region:32741-34111:1
so has part: feature:32741-32885:1:exon
so has part: feature:33714-34111:1:exon

NP_039379.1
type: Protein
SIO_000068: ncbiprotein

P12087
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:32741-32885:1:exon

position:32885:1
position: 32885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33714-34111:1:exon

position:33714:1
position: 33714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OrsajCp021
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: atpF
locus tag: OrsajCp021
number: 1
SIO_010081: OrsajCp021
subclass of: SO_0000673
so part of: OrsajCp021
location: 32741..32885
location: region:32741-32885:1
so has part: feature:32741-32885:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32741-32885:1:exon

OrsajCp021
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: atpF
locus tag: OrsajCp021
number: 2
SIO_010081: OrsajCp021
subclass of: SO_0000673
so part of: OrsajCp021
location: 33714..34111
location: region:33714-34111:1
so has part: feature:33714-34111:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33714-34111:1:exon

OrsajCp022
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: atpA
locus tag: OrsajCp022
so part of: sequence
location: 34210..35733
location: region:34210-35733:1
so has part: feature:34210-35733:1:exon
subclass of: SO_0000010

3131390
type: Gene
SIO_000068: ncbigene

position:34210:1
position: 34210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35733:1
position: 35733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34210-35733:1:exon

OrsajCp022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: atpA
locus tag: OrsajCp022
note: ATP synthase CF1 alpha chain; ATPase alpha subunit
codon start: 1
transl table: 11
product: ATP synthase CF1 alpha subunit
translation: MATLRVDEIHKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMSGELVEFAEGTRGIALNLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELQAFAQFASALDKTSQNQLARGRRLRELLKQSQANPLPVEEQIATIYIGTRGYLDSLEIGQVKKFLDELRKHLKDTKPQFQEIISSSKTFTEEAEILLKEAIQEQLERFSLQEQT
SIO_010081: OrsajCp022
subclass of: SO_0000673
so part of: OrsajCp022
location: 34210..35733
location: region:34210-35733:1
so has part: feature:34210-35733:1:exon

NP_039380.1
type: Protein
SIO_000068: ncbiprotein

P12084
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:34210-35733:1:exon

OrsajCt136
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt136
so part of: sequence
location: complement(35866..35937)
location: region:35866-35937:-1
so has part: feature:35866-35937:-1:exon
subclass of: SO_0000663

3131351
type: Gene
SIO_000068: ncbigene

position:35866:-1
position: 35866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35937:-1
position: 35937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35866-35937:-1:exon

OrsajCt136
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt136
product: tRNA-Arg
note: trnR; tRNA-Arg(UCU)
SIO_010081: OrsajCt136
subclass of: SO_0000673
so part of: OrsajCt136
location: complement(35866..35937)
location: region:35866-35937:-1
so has part: feature:35866-35937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35866-35937:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 39947
note: chimeric pseudogene fusing trnfM(CAU) to trnG(UCC)
so part of: sequence
location: complement(36073..36147)
location: region:36073-36147:-1
so has part: feature:36073-36147:-1:region

position:36073:-1
position: 36073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36147:-1
position: 36147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36073-36147:-1:region

OrsajCp023
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rps14
locus tag: OrsajCp023
so part of: sequence
location: complement(36309..36620)
location: region:36309-36620:-1
so has part: feature:36309-36620:-1:exon
subclass of: SO_0000010

3131436
type: Gene
SIO_000068: ncbigene

position:36309:-1
position: 36309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36620:-1
position: 36620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36309-36620:-1:exon

OrsajCp023
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rps14
locus tag: OrsajCp023
note: 30S ribosomal protein S14
codon start: 1
transl table: 11
product: ribosomal protein S14
translation: MAKKSLIQRERKRQKLEQKYHLIRRSSKKKIRSKVYPLSLSEKTKMREKLQSLPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVYACLLPGATRSSW
SIO_010081: OrsajCp023
subclass of: SO_0000673
so part of: OrsajCp023
location: complement(36309..36620)
location: region:36309-36620:-1
so has part: feature:36309-36620:-1:exon

NP_039381.1
type: Protein
SIO_000068: ncbiprotein

P09096
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:36309-36620:-1:exon

OrsajCp024
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psaB
locus tag: OrsajCp024
so part of: sequence
location: complement(36768..38972)
location: region:36768-38972:-1
so has part: feature:36768-38972:-1:exon
subclass of: SO_0000010

3131407
type: Gene
SIO_000068: ncbigene

position:36768:-1
position: 36768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38972:-1
position: 38972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36768-38972:-1:exon

OrsajCp024
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psaB
locus tag: OrsajCp024
note: PSI P700 apoprotein A2; PsaB
codon start: 1
transl table: 11
product: photosystem I P700 chlorophyll a apoprotein A2
translation: MELRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLWTSGNLFHVAWQGNFESWIQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGAAGPVNIAYSGVYQWWYTIGLRTNEDLYTGALFLLFLSTLSLIGGWLHLQPKWKPSLSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLDVLPYPQGLGPLLTGQWNLYAQNPDSSNHLFGTTQGAGTAILTLLGGFHPQTQSLWLTDIAHHHLAIAFIFLIAGHMYRTNFGIGHSIKDLLEAHTPPGGRLGRGHKGLYDTINNSIHFQLGLALASLGVITSLVAQHMYSLPSYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNEDNVLARMLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKTTYGFDILLSSTSGPAFNAGRTLWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHITLWQGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG
SIO_010081: OrsajCp024
subclass of: SO_0000673
so part of: OrsajCp024
location: complement(36768..38972)
location: region:36768-38972:-1
so has part: feature:36768-38972:-1:exon

NP_039382.1
type: Protein
SIO_000068: ncbiprotein

P12156
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:36768-38972:-1:exon

OrsajCp025
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psaA
locus tag: OrsajCp025
so part of: sequence
location: complement(38998..41250)
location: region:38998-41250:-1
so has part: feature:38998-41250:-1:exon
subclass of: SO_0000010

3131406
type: Gene
SIO_000068: ncbigene

position:38998:-1
position: 38998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41250:-1
position: 41250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38998-41250:-1:exon

OrsajCp025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psaA
locus tag: OrsajCp025
note: PSI P700 apoprotein A1; PsaA
codon start: 1
transl table: 11
product: photosystem I P700 chlorophyll a apoprotein A1
translation: MMIRSPEPEVKIVVDRDPVKTSFEEWARPGHFSRTLAKGPDTTTWIWNLHADAHDFDSHTGDLEEISRKVFSAHFGQLSIIFLWLSGMYFHGARFSNYEAWLSDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQISSGFFQIWRASGITSELQLYCTAIGALIFASLMLFAGWFHYHKAAPKLAWSHDVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINQFLDAGVDPKEIPLPHEFILNRDLLAQLYPSFAERATPFFTLNWSKYAEFLSFRGGLDPITGGLWLSDIAHHHLAIAILFLIAGHMYRTNWGIGHGLKDILEAHKGPFTGQRHKGLYEILTTSWHAQLSLNLAMLGSTTIVVAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPIFAQWVQNLHAGAPRLTAPGATTSTSLTWGGGELVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGTISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIIQGRAVGVTHYLLGGIATTWAFFLARIIAVG
SIO_010081: OrsajCp025
subclass of: SO_0000673
so part of: OrsajCp025
location: complement(38998..41250)
location: region:38998-41250:-1
so has part: feature:38998-41250:-1:exon

NP_039383.1
type: Protein
SIO_000068: ncbiprotein

P12155
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:38998-41250:-1:exon

OrsajCp026
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: ycf3
locus tag: OrsajCp026
so part of: sequence
location: complement(41851..43837)
location: region:41851-43837:-1
so has part: feature:41851-43837:-1:exon
subclass of: SO_0000010

3131456
type: Gene
SIO_000068: ncbigene

position:41851:-1
position: 41851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43837:-1
position: 43837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41851-43837:-1:exon

OrsajCp026
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: ycf3
locus tag: OrsajCp026
note: ORF170
codon start: 1
transl table: 11
product: photosystem I assembly protein Ycf3
translation: MPRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRDGMLAQSEGNYAEALQNYYEATRLESDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYGEQAILQGDSEIAEAWFDQAAEYWKQAIGLTPGNYIEAQNWLKITKRFEFE
SIO_010081: OrsajCp026
subclass of: SO_0000673
so part of: OrsajCp026
location: complement(join(41851..42006,42739..42968,43714..43837))
location: region:41851-43837:-1
so has part: feature:43714-43837:-1:exon
so has part: feature:42739-42968:-1:exon
so has part: feature:41851-42006:-1:exon

NP_039384.1
type: Protein
SIO_000068: ncbiprotein

P12203
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:43714-43837:-1:exon

position:43714:-1
position: 43714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:42739-42968:-1:exon

position:42739:-1
position: 42739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42968:-1
position: 42968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41851-42006:-1:exon

position:42006:-1
position: 42006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OrsajCp026
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: ycf3
locus tag: OrsajCp026
number: 3
SIO_010081: OrsajCp026
subclass of: SO_0000673
so part of: OrsajCp026
location: complement(41851..42006)
location: region:41851-42006:-1
so has part: feature:41851-42006:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41851-42006:-1:exon

OrsajCp026
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: ycf3
locus tag: OrsajCp026
number: 2
SIO_010081: OrsajCp026
subclass of: SO_0000673
so part of: OrsajCp026
location: complement(42739..42968)
location: region:42739-42968:-1
so has part: feature:42739-42968:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42739-42968:-1:exon

OrsajCp026
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: ycf3
locus tag: OrsajCp026
number: 1
SIO_010081: OrsajCp026
subclass of: SO_0000673
so part of: OrsajCp026
location: complement(43714..43837)
location: region:43714-43837:-1
so has part: feature:43714-43837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43714-43837:-1:exon

OrsajCt137
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt137
so part of: sequence
location: 44438..44524
location: region:44438-44524:1
so has part: feature:44438-44524:1:exon
subclass of: SO_0000663

3131352
type: Gene
SIO_000068: ncbigene

position:44438:1
position: 44438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44524:1
position: 44524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44438-44524:1:exon

OrsajCt137
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt137
product: tRNA-Ser
note: trnS; tRNA-Ser(GGA)
SIO_010081: OrsajCt137
subclass of: SO_0000673
so part of: OrsajCt137
location: 44438..44524
location: region:44438-44524:1
so has part: feature:44438-44524:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44438-44524:1:exon

OrsajCp027
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rps4
locus tag: OrsajCp027
so part of: sequence
location: complement(44810..45415)
location: region:44810-45415:-1
so has part: feature:44810-45415:-1:exon
subclass of: SO_0000010

3131457
type: Gene
SIO_000068: ncbigene

position:44810:-1
position: 44810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45415:-1
position: 45415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44810-45415:-1:exon

OrsajCp027
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rps4
locus tag: OrsajCp027
codon start: 1
transl table: 11
product: ribosomal protein S4
translation: MSRYRGPRFKKIRRLGALPGLTRKTPKSGSNLKKKFHSGKKEQYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKSSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRHILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTIDTLQYKGLVKKILDRKWVGLKINELLVVEYYSRQT
SIO_010081: OrsajCp027
subclass of: SO_0000673
so part of: OrsajCp027
location: complement(44810..45415)
location: region:44810-45415:-1
so has part: feature:44810-45415:-1:exon

NP_039385.1
type: Protein
SIO_000068: ncbiprotein

P12147
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:44810-45415:-1:exon

OrsajCt138
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt138
so part of: sequence
location: complement(45715..45787)
location: region:45715-45787:-1
so has part: feature:45715-45787:-1:exon
subclass of: SO_0000663

3131353
type: Gene
SIO_000068: ncbigene

position:45715:-1
position: 45715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45787:-1
position: 45787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45715-45787:-1:exon

OrsajCt138
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt138
product: tRNA-Thr
note: trnT; tRNA-Thr(UGU)
SIO_010081: OrsajCt138
subclass of: SO_0000673
so part of: OrsajCt138
location: complement(45715..45787)
location: region:45715-45787:-1
so has part: feature:45715-45787:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45715-45787:-1:exon

OrsajCt139
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt139
so part of: sequence
location: 46558..47182
location: region:46558-47182:1
so has part: feature:46558-47182:1:exon
subclass of: SO_0000663

3131354
type: Gene
SIO_000068: ncbigene

position:46558:1
position: 46558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47182:1
position: 47182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46558-47182:1:exon

OrsajCt139
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt139
product: tRNA-Leu
note: trnL; tRNA-Leu(UAA)
SIO_010081: OrsajCt139
subclass of: SO_0000673
so part of: OrsajCt139
location: join(46558..46592,47133..47182)
location: region:46558-47182:1
so has part: feature:46558-46592:1:exon
so has part: feature:47133-47182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46558-46592:1:exon

position:46592:1
position: 46592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:47133-47182:1:exon

position:47133:1
position: 47133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OrsajCt140
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt140
so part of: sequence
location: 47425..47497
location: region:47425-47497:1
so has part: feature:47425-47497:1:exon
subclass of: SO_0000663

3131355
type: Gene
SIO_000068: ncbigene

position:47425:1
position: 47425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47497:1
position: 47497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47425-47497:1:exon

OrsajCt140
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt140
product: tRNA-Phe
note: trnF; tRNA-Phe(GAA)
SIO_010081: OrsajCt140
subclass of: SO_0000673
so part of: OrsajCt140
location: 47425..47497
location: region:47425-47497:1
so has part: feature:47425-47497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47425-47497:1:exon

OrsajCp028
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: ndhJ
locus tag: OrsajCp028
so part of: sequence
location: complement(47992..48471)
location: region:47992-48471:-1
so has part: feature:47992-48471:-1:exon
subclass of: SO_0000010

3131458
type: Gene
SIO_000068: ncbigene

position:47992:-1
position: 47992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48471:-1
position: 48471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47992-48471:-1:exon

OrsajCp028
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: ndhJ
locus tag: OrsajCp028
note: NADH dehydrogenase 30 kDa subunit
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit J
translation: MQQGWLSNWLVKHEVVHRSLGFDHRGIETLQIKAEDWDSIAVILYVYGYNYLRSQCAYDVAPGGSLASVYHLTRIQYGIDNPEEVCIKVFAQKDNPRIPSVFWIWRSSDFQERESFDMVGISYDNHPRLKRILMPESWIGWPLRKDYITPNFYEIQDAH
SIO_010081: OrsajCp028
subclass of: SO_0000673
so part of: OrsajCp028
location: complement(47992..48471)
location: region:47992-48471:-1
so has part: feature:47992-48471:-1:exon

NP_039386.1
type: Protein
SIO_000068: ncbiprotein

P12200
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:47992-48471:-1:exon

OrsajCp029
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: ndhK
locus tag: OrsajCp029
so part of: sequence
location: complement(48569..49246)
location: region:48569-49246:-1
so has part: feature:48569-49246:-1:exon
subclass of: SO_0000010

3131459
type: Gene
SIO_000068: ncbigene

position:48569:-1
position: 48569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49246:-1
position: 49246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48569-49246:-1:exon

OrsajCp029
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: ndhK
locus tag: OrsajCp029
note: NADH dehydrogenase 27 kDa subunit
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit K
translation: MSLIEFPLLDQRSSNSVISTTLKDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKLRKKISREIVEDRTLSQKKNRCFTTSHKLYVRRSTNTGTYEQELLYQSPSTLDISSETFFKSKSPVSSYKLVN
SIO_010081: OrsajCp029
subclass of: SO_0000673
so part of: OrsajCp029
location: complement(48569..49246)
location: region:48569-49246:-1
so has part: feature:48569-49246:-1:exon

NP_039387.2
type: Protein
SIO_000068: ncbiprotein

P12159
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:48569-49246:-1:exon

OrsajCp030
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
alternative label: ndh3
gene: ndhC
locus tag: OrsajCp030
gene synonym: ndh3
so part of: sequence
location: complement(49300..49662)
location: region:49300-49662:-1
so has part: feature:49300-49662:-1:exon
subclass of: SO_0000010

3131460
type: Gene
SIO_000068: ncbigene

position:49300:-1
position: 49300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49662:-1
position: 49662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49300-49662:-1:exon

OrsajCp030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
alternative label: ndh3
gene: ndhC
locus tag: OrsajCp030
gene synonym: ndh3
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 3
translation: MFLLHEYDIFWAFLIIASLIPILAFWISALLAPVREGPEKLSSYESGIEPMGGAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGISVFIEAFIFVLILVVGLVYAWRKGALEWS
SIO_010081: OrsajCp030
subclass of: SO_0000673
so part of: OrsajCp030
location: complement(49300..49662)
location: region:49300-49662:-1
so has part: feature:49300-49662:-1:exon

NP_039388.1
type: Protein
SIO_000068: ncbiprotein

P12126
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:49300-49662:-1:exon

OrsajCt141
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt141
so part of: sequence
location: complement(50999..51037)
location: region:50999-51037:-1
so has part: feature:50999-51037:-1:exon
subclass of: SO_0000663

3131356
type: Gene
SIO_000068: ncbigene

position:50999:-1
position: 50999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51037:-1
position: 51037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50999-51037:-1:exon

OrsajCt141
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt141
product: tRNA-Val
note: trnV; tRNA-Val(UAC)
SIO_010081: OrsajCt141
subclass of: SO_0000673
so part of: OrsajCt141
location: complement(50999..51037)
location: region:50999-51037:-1
so has part: feature:50999-51037:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50999-51037:-1:exon

OrsajCt142
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt142
so part of: sequence
location: 51219..51291
location: region:51219-51291:1
so has part: feature:51219-51291:1:exon
subclass of: SO_0000663

3131357
type: Gene
SIO_000068: ncbigene

position:51219:1
position: 51219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51291:1
position: 51291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51219-51291:1:exon

OrsajCt142
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt142
product: tRNA-Met
note: trnM; tRNA-Met(CAU)
SIO_010081: OrsajCt142
subclass of: SO_0000673
so part of: OrsajCt142
location: 51219..51291
location: region:51219-51291:1
so has part: feature:51219-51291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51219-51291:1:exon

OrsajCp031
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: atpE
locus tag: OrsajCp031
so part of: sequence
location: complement(51404..51817)
location: region:51404-51817:-1
so has part: feature:51404-51817:-1:exon
subclass of: SO_0000010

3131461
type: Gene
SIO_000068: ncbigene

position:51404:-1
position: 51404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51817:-1
position: 51817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51404-51817:-1:exon

OrsajCp031
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: atpE
locus tag: OrsajCp031
note: ATP synthase epsilon chain
codon start: 1
transl table: 11
product: ATP synthase CF1 epsilon subunit
translation: MKLNLYVLTPKRIIWDCEVKEIILSTNSGQIGVLPNHAPINTAVDMGPLRIRLLNDQWLTAVLWSGFARIVNNEIIILGNDAELGSDIDPEEAQQALEIAEANVSRAEGTKELVEAKVALRRARIRVEAVNWIPPSN
SIO_010081: OrsajCp031
subclass of: SO_0000673
so part of: OrsajCp031
location: complement(51404..51817)
location: region:51404-51817:-1
so has part: feature:51404-51817:-1:exon

NP_039389.1
type: Protein
SIO_000068: ncbiprotein

P12086
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:51404-51817:-1:exon

OrsajCp032
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: atpB
locus tag: OrsajCp032
so part of: sequence
location: complement(51814..53310)
location: region:51814-53310:-1
so has part: feature:51814-53310:-1:exon
subclass of: SO_0000010

3131462
type: Gene
SIO_000068: ncbigene

position:51814:-1
position: 51814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53310:-1
position: 53310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51814-53310:-1:exon

OrsajCp032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: atpB
locus tag: OrsajCp032
note: ATPase beta chain
codon start: 1
transl table: 11
product: ATP synthase CF1 beta subunit
translation: MRTNPTTSRPGVSTIEEKSTGRIDQIIGPVLDVTFPRGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVGNIDEASTKAINLEEENKLKK
SIO_010081: OrsajCp032
subclass of: SO_0000673
so part of: OrsajCp032
location: complement(51814..53310)
location: region:51814-53310:-1
so has part: feature:51814-53310:-1:exon

NP_039390.1
type: Protein
SIO_000068: ncbiprotein

P12085
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:51814-53310:-1:exon

OrsajCp033
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rbcL
locus tag: OrsajCp033
so part of: sequence
location: 54095..55528
location: region:54095-55528:1
so has part: feature:54095-55528:1:exon
subclass of: SO_0000010

3131463
type: Gene
SIO_000068: ncbigene

position:54095:1
position: 54095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55528:1
position: 55528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54095-55528:1:exon

OrsajCp033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rbcL
locus tag: OrsajCp033
note: RuBisCO large subunit
codon start: 1
transl table: 11
product: ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
translation: MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVVGEDNQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPTYSKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRACYECLRGGLDFTKDDENVNSQPFMRWRDRFVFCAEAIYKSQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGEREMTLGFVDLLRDDFIEKDRARGIFFTQDWVSMPGVIPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAAANRVALEACVQARNEGRDLAREGNEIIRSACKWSPELAAACEIWKAIKFEFEPVDKLDS
SIO_010081: OrsajCp033
subclass of: SO_0000673
so part of: OrsajCp033
location: 54095..55528
location: region:54095-55528:1
so has part: feature:54095-55528:1:exon

NP_039391.1
type: Protein
SIO_000068: ncbiprotein

P12089
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:54095-55528:1:exon

OrsajCp034
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp034
so part of: sequence
location: 55806..55934
location: region:55806-55934:1
so has part: feature:55806-55934:1:exon
subclass of: SO_0000010

3131464
type: Gene
SIO_000068: ncbigene

position:55806:1
position: 55806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55934:1
position: 55934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55806-55934:1:exon

OrsajCp034
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp034
note: similar to rpl23
codon start: 1
transl table: 11
product: ORF42
translation: MESNTQYLQKKFSFIGKESMTYNALQTYDHYPLTGLFYSTSR
SIO_010081: OrsajCp034
subclass of: SO_0000673
so part of: OrsajCp034
location: 55806..55934
location: region:55806-55934:1
so has part: feature:55806-55934:1:exon

NP_039392.1
type: Protein
SIO_000068: ncbiprotein

Q32761
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:55806-55934:1:exon

OrsajCp035
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp035
so part of: sequence
location: 55958..56359
location: region:55958-56359:1
so has part: feature:55958-56359:1:exon
subclass of: SO_0000010

3131465
type: Gene
SIO_000068: ncbigene

position:55958:1
position: 55958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56359:1
position: 56359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55958-56359:1:exon

OrsajCp035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp035
note: ORF133
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKDRVWKLDPFLRLSFKKEDILKLLTGTIVSQQVTRNARKKRELIFKMVELDDEVFYNLDEEVVLVYDSDQEREVFHFRLDCYRIWTHRRDVQKAPDDKNHTFAELHGAMGFNAVDVLFRIFLEQTSDPTIQ
SIO_010081: OrsajCp035
subclass of: SO_0000673
so part of: OrsajCp035
location: 55958..56359
location: region:55958-56359:1
so has part: feature:55958-56359:1:exon

NP_039393.1
type: Protein
SIO_000068: ncbiprotein

Q32762
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:55958-56359:1:exon

OrsajCp036
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp036
so part of: sequence
location: 56553..56873
location: region:56553-56873:1
so has part: feature:56553-56873:1:exon
subclass of: SO_0000010

3131466
type: Gene
SIO_000068: ncbigene

position:56553:1
position: 56553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56873:1
position: 56873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56553-56873:1:exon

OrsajCp036
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp036
note: ORF106
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase beta subunit
translation: MALQSLRGSMRSVVGKRICPLIEYAIFPPLPRIIVYASRRARMQRGNYSLIKKPKKVSTLRQYQSTKSPMYQSLQRICGVREWLNKYCMWKEVDEKDFGFEIGAFD
SIO_010081: OrsajCp036
subclass of: SO_0000673
so part of: OrsajCp036
location: 56553..56873
location: region:56553-56873:1
so has part: feature:56553-56873:1:exon

NP_039394.1
type: Protein
SIO_000068: ncbiprotein

P12218
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:56553-56873:1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 39947
rpt type: inverted
so part of: sequence
location: 57010..57075
location: region:57010-57075:1
so has part: feature:57010-57075:1:region

position:57010:1
position: 57010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57075:1
position: 57075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57010-57075:1:region

OrsajCp037
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psaI
locus tag: OrsajCp037
so part of: sequence
location: 57222..57332
location: region:57222-57332:1
so has part: feature:57222-57332:1:exon
subclass of: SO_0000010

3131467
type: Gene
SIO_000068: ncbigene

position:57222:1
position: 57222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57332:1
position: 57332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57222-57332:1:exon

OrsajCp037
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psaI
locus tag: OrsajCp037
note: ORF36
codon start: 1
transl table: 11
product: photosystem I subunit VIII
translation: MMDFNLPSIFVPLVGLVFPAIAMASLFLYVQKNKIV
SIO_010081: OrsajCp037
subclass of: SO_0000673
so part of: OrsajCp037
location: 57222..57332
location: region:57222-57332:1
so has part: feature:57222-57332:1:exon

NP_039395.1
type: Protein
SIO_000068: ncbiprotein

P12186
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:57222-57332:1:exon

OrsajCp038
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: ycf4
locus tag: OrsajCp038
so part of: sequence
location: 57702..58259
location: region:57702-58259:1
so has part: feature:57702-58259:1:exon
subclass of: SO_0000010

3131468
type: Gene
SIO_000068: ncbigene

position:57702:1
position: 57702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58259:1
position: 58259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57702-58259:1:exon

OrsajCp038
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: ycf4
locus tag: OrsajCp038
note: ORF185
codon start: 1
transl table: 11
product: photosystem I assembly protein Ycf4
translation: MNWRSEHIWIELLKGSRKRGNFFWACILFLGSLGFLAVGASSYLGKNIISVLPSQQILFFPQGVVMSFYGIAGLFISAYLWCTILWNVGSGYDRFDRKEGVVCIFRWGFPGIKRRVFLRFLMRDIQSIRIQVKEGLFPRRILYMEIRGQGAIPLTRTDEKFFTPREIEQKAAELAYFLRIPMEVF
SIO_010081: OrsajCp038
subclass of: SO_0000673
so part of: OrsajCp038
location: 57702..58259
location: region:57702-58259:1
so has part: feature:57702-58259:1:exon

NP_039396.1
type: Protein
SIO_000068: ncbiprotein

P12206
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:57702-58259:1:exon

OrsajCp039
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp039
so part of: sequence
location: 58290..58547
location: region:58290-58547:1
so has part: feature:58290-58547:1:exon
subclass of: SO_0000010

3131469
type: Gene
SIO_000068: ncbigene

position:58290:1
position: 58290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58547:1
position: 58547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58290-58547:1:exon

OrsajCp039
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp039
note: ORF85
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKNWKKKSFLNTREKVPSKLHYCKGILSIYLKEGTNEDKRKLLLICPSGIYGVIFFHFHPKDFFLFLYSTPSRSKKELNAMKFY
SIO_010081: OrsajCp039
subclass of: SO_0000673
so part of: OrsajCp039
location: 58290..58547
location: region:58290-58547:1
so has part: feature:58290-58547:1:exon

NP_039397.1
type: Protein
SIO_000068: ncbiprotein

Q32763
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:58290-58547:1:exon

OrsajCp040
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
alternative label: ycf10
gene: cemA
locus tag: OrsajCp040
gene synonym: ycf10
so part of: sequence
location: 58677..59369
location: region:58677-59369:1
so has part: feature:58677-59369:1:exon
subclass of: SO_0000010

3131470
type: Gene
SIO_000068: ncbigene

position:58677:1
position: 58677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59369:1
position: 59369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58677-59369:1:exon

OrsajCp040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
alternative label: ycf10
gene: cemA
locus tag: OrsajCp040
gene synonym: ycf10
note: heme-binding protein
codon start: 1
transl table: 11
product: envelope membrane protein
translation: MKKKKALPSFLYLVFIVLLPWGVSFSFNKCLELWIKNWWNTRQSQTLLTAIQEKRVLERFMELEDLFILDEMIKEKPNTHVQNPPIGIRKEIIQLAKIDNEGHLHIILHFSTNIICLAILSGSFFLGKEELVILNSWVQEFFYNLNDSVKAFFILLVTDFFVGFHSTRGWELLIRWVYNDLGWVPNELIFTIFVCSFPVILDTCLKFWVFFCLNRLSPSLVVIYHSISEA
SIO_010081: OrsajCp040
subclass of: SO_0000673
so part of: OrsajCp040
location: 58677..59369
location: region:58677-59369:1
so has part: feature:58677-59369:1:exon

NP_039398.1
type: Protein
SIO_000068: ncbiprotein

P12212
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:58677-59369:1:exon

OrsajCp041
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: petA
locus tag: OrsajCp041
so part of: sequence
location: 59601..60563
location: region:59601-60563:1
so has part: feature:59601-60563:1:exon
subclass of: SO_0000010

3131402
type: Gene
SIO_000068: ncbigene

position:59601:1
position: 59601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60563:1
position: 60563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59601-60563:1:exon

OrsajCp041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: petA
locus tag: OrsajCp041
note: apocytochrome f precursor; component of cytochrome b6/f complex
codon start: 1
transl table: 11
product: cytochrome f
translation: MENRNTFSWVKEQMTRSISVSIMIYVITRTSISNAYPIFAQQGYENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVLRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPELKEKIGNLSFQSYRPNKKNILVIGPVPGKKYSEIVFPILSPDPAMKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATSTGVVRKILRKEKGGYEISIVDASDGRQVIDLIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFFASVILAQVFLVLKKKQFEKVQLYEMNF
SIO_010081: OrsajCp041
subclass of: SO_0000673
so part of: OrsajCp041
location: 59601..60563
location: region:59601-60563:1
so has part: feature:59601-60563:1:exon

NP_039399.1
type: Protein
SIO_000068: ncbiprotein

P07888
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:59601-60563:1:exon

OrsajCp042
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psbJ
locus tag: OrsajCp042
so part of: sequence
location: complement(61565..61687)
location: region:61565-61687:-1
so has part: feature:61565-61687:-1:exon
subclass of: SO_0000010

3131471
type: Gene
SIO_000068: ncbigene

position:61565:-1
position: 61565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61687:-1
position: 61687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61565-61687:-1:exon

OrsajCp042
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psbJ
locus tag: OrsajCp042
note: photosystem II reaction center subunit X
codon start: 1
transl table: 11
product: photosystem II protein J
translation: MADTTGRIPLWLIGTVTGIAVIGLIGVFFYGSYSGLGSSL
SIO_010081: OrsajCp042
subclass of: SO_0000673
so part of: OrsajCp042
location: complement(61565..61687)
location: region:61565-61687:-1
so has part: feature:61565-61687:-1:exon

NP_039400.1
type: Protein
SIO_000068: ncbiprotein

P12189
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:61565-61687:-1:exon

OrsajCp043
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psbL
locus tag: OrsajCp043
so part of: sequence
location: complement(61814..61930)
location: region:61814-61930:-1
so has part: feature:61814-61930:-1:exon
subclass of: SO_0000010

3131418
type: Gene
SIO_000068: ncbigene

position:61814:-1
position: 61814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61930:-1
position: 61930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61814-61930:-1:exon

OrsajCp043
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psbL
locus tag: OrsajCp043
note: PSII reaction center subunit XII
codon start: 1
transl table: 11
product: photosystem II protein L
translation: MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
SIO_010081: OrsajCp043
subclass of: SO_0000673
so part of: OrsajCp043
location: complement(61814..61930)
location: region:61814-61930:-1
so has part: feature:61814-61930:-1:exon

NP_039401.1
type: Protein
SIO_000068: ncbiprotein

P12166
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:61814-61930:-1:exon

OrsajCp044
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psbF
locus tag: OrsajCp044
so part of: sequence
location: complement(61953..62072)
location: region:61953-62072:-1
so has part: feature:61953-62072:-1:exon
subclass of: SO_0000010

3131414
type: Gene
SIO_000068: ncbigene

position:61953:-1
position: 61953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62072:-1
position: 62072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61953-62072:-1:exon

OrsajCp044
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psbF
locus tag: OrsajCp044
note: photosystem II reaction center subunit VI
codon start: 1
transl table: 11
product: photosystem II protein VI
translation: MTIDRTYPIFTVRWLAVHGLAVPTVFFLGSISAMQFIQR
SIO_010081: OrsajCp044
subclass of: SO_0000673
so part of: OrsajCp044
location: complement(61953..62072)
location: region:61953-62072:-1
so has part: feature:61953-62072:-1:exon

NP_039402.1
type: Protein
SIO_000068: ncbiprotein

P12088
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:61953-62072:-1:exon

OrsajCp045
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psbE
locus tag: OrsajCp045
so part of: sequence
location: complement(62083..62334)
location: region:62083-62334:-1
so has part: feature:62083-62334:-1:exon
subclass of: SO_0000010

3131413
type: Gene
SIO_000068: ncbigene

position:62083:-1
position: 62083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62334:-1
position: 62334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62083-62334:-1:exon

OrsajCp045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psbE
locus tag: OrsajCp045
note: cytochrome b559 alpha subunit
codon start: 1
transl table: 11
product: photosystem II protein V
translation: MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEFSRSF
SIO_010081: OrsajCp045
subclass of: SO_0000673
so part of: OrsajCp045
location: complement(62083..62334)
location: region:62083-62334:-1
so has part: feature:62083-62334:-1:exon

NP_039403.1
type: Protein
SIO_000068: ncbiprotein

P05169
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:62083-62334:-1:exon

OrsajCp046
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: petL
locus tag: OrsajCp046
so part of: sequence
location: 63531..63626
location: region:63531-63626:1
so has part: feature:63531-63626:1:exon
subclass of: SO_0000010

3131472
type: Gene
SIO_000068: ncbigene

position:63531:1
position: 63531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63626:1
position: 63626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63531-63626:1:exon

OrsajCp046
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: petL
locus tag: OrsajCp046
note: ORF31
codon start: 1
transl table: 11
product: cytochrome b6/f complex subunit VI
translation: MLTITSYFGFLLAALTLTLALFIGLNKIRLI
SIO_010081: OrsajCp046
subclass of: SO_0000673
so part of: OrsajCp046
location: 63531..63626
location: region:63531-63626:1
so has part: feature:63531-63626:1:exon

NP_039404.1
type: Protein
SIO_000068: ncbiprotein

P12180
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:63531-63626:1:exon

OrsajCp047
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: petG
locus tag: OrsajCp047
so part of: sequence
location: 63799..63912
location: region:63799-63912:1
so has part: feature:63799-63912:1:exon
subclass of: SO_0000010

3131405
type: Gene
SIO_000068: ncbigene

position:63799:1
position: 63799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63912:1
position: 63912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63799-63912:1:exon

OrsajCp047
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: petG
locus tag: OrsajCp047
note: cytochrome B6-F complex subunit 5; required for the either the stability or assembly of the cytochrome b6/f complex
codon start: 1
transl table: 11
product: cytochrome b6/f complex subunit V
translation: MIEVFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
SIO_010081: OrsajCp047
subclass of: SO_0000673
so part of: OrsajCp047
location: 63799..63912
location: region:63799-63912:1
so has part: feature:63799-63912:1:exon

NP_039405.1
type: Protein
SIO_000068: ncbiprotein

P12121
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:63799-63912:1:exon

OrsajCt143
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt143
so part of: sequence
location: complement(64029..64102)
location: region:64029-64102:-1
so has part: feature:64029-64102:-1:exon
subclass of: SO_0000663

3131358
type: Gene
SIO_000068: ncbigene

position:64029:-1
position: 64029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64102:-1
position: 64102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64029-64102:-1:exon

OrsajCt143
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt143
product: tRNA-Trp
note: trnW; tRNA-Trp(CCA)
SIO_010081: OrsajCt143
subclass of: SO_0000673
so part of: OrsajCt143
location: complement(64029..64102)
location: region:64029-64102:-1
so has part: feature:64029-64102:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64029-64102:-1:exon

OrsajCt144
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt144
so part of: sequence
location: complement(64229..64303)
location: region:64229-64303:-1
so has part: feature:64229-64303:-1:exon
subclass of: SO_0000663

3131359
type: Gene
SIO_000068: ncbigene

position:64229:-1
position: 64229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64303:-1
position: 64303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64229-64303:-1:exon

OrsajCt144
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt144
product: tRNA-Pro
note: trnP; tRNA-Pro(UGG)
SIO_010081: OrsajCt144
subclass of: SO_0000673
so part of: OrsajCt144
location: complement(64229..64303)
location: region:64229-64303:-1
so has part: feature:64229-64303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64229-64303:-1:exon

OrsajCp048
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp048
so part of: sequence
location: 64622..64756
location: region:64622-64756:1
so has part: feature:64622-64756:1:exon
subclass of: SO_0000010

3131473
type: Gene
SIO_000068: ncbigene

position:64622:1
position: 64622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64756:1
position: 64756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64622-64756:1:exon

OrsajCp048
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp048
note: ORF44
codon start: 1
transl table: 11
product: photosystem I subunit IX
translation: MRDIKTYLSVAPVVSTLWFGALRGLLIEINRLFPDALSFPFFSF
SIO_010081: OrsajCp048
subclass of: SO_0000673
so part of: OrsajCp048
location: 64622..64756
location: region:64622-64756:1
so has part: feature:64622-64756:1:exon

NP_039406.1
type: Protein
SIO_000068: ncbiprotein

P12192
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:64622-64756:1:exon

OrsajCp049
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rpl33
locus tag: OrsajCp049
so part of: sequence
location: 65198..65398
location: region:65198-65398:1
so has part: feature:65198-65398:1:exon
subclass of: SO_0000010

3131429
type: Gene
SIO_000068: ncbigene

position:65198:1
position: 65198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65398:1
position: 65398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65198-65398:1:exon

OrsajCp049
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rpl33
locus tag: OrsajCp049
codon start: 1
transl table: 11
product: ribosomal protein L33
translation: MAKGKDVRIRVILQCVSCVRKGANEESAGISRYSTQKNRHNTPGQLELRKFCRYCRKHTIHAEIKK
SIO_010081: OrsajCp049
subclass of: SO_0000673
so part of: OrsajCp049
location: 65198..65398
location: region:65198-65398:1
so has part: feature:65198-65398:1:exon

NP_039407.1
type: Protein
SIO_000068: ncbiprotein

P12141
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:65198-65398:1:exon

OrsajCp050
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rps18
locus tag: OrsajCp050
so part of: sequence
location: 65641..66132
location: region:65641-66132:1
so has part: feature:65641-66132:1:exon
subclass of: SO_0000010

3131440
type: Gene
SIO_000068: ncbigene

position:65641:1
position: 65641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66132:1
position: 66132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65641-66132:1:exon

OrsajCp050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rps18
locus tag: OrsajCp050
codon start: 1
transl table: 11
product: ribosomal protein S18
translation: MYTSKQPFHKSKQTFHKSKQTFRKSKQTFRKFKQPFRKPKQPFRRRPRIGPGDRIDYRNMSLINRFISEQGKILSRRINRLTLKQQRLITLAIKQARILSFLPFRNYENEKQFQAQSISIITGPRPRKNRHIPPLTQKFNSNRNLRNSNQTLRNTNRNLSSDC
SIO_010081: OrsajCp050
subclass of: SO_0000673
so part of: OrsajCp050
location: 65641..66132
location: region:65641-66132:1
so has part: feature:65641-66132:1:exon

NP_039408.1
type: Protein
SIO_000068: ncbiprotein

P12152
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:65641-66132:1:exon

OrsajCp051
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rpl20
locus tag: OrsajCp051
so part of: sequence
location: complement(66355..66714)
location: region:66355-66714:-1
so has part: feature:66355-66714:-1:exon
subclass of: SO_0000010

3131425
type: Gene
SIO_000068: ncbigene

position:66355:-1
position: 66355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66714:-1
position: 66714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66355-66714:-1:exon

OrsajCp051
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rpl20
locus tag: OrsajCp051
note: 50S ribosomal protein L20
codon start: 1
transl table: 11
product: ribosomal protein L20
translation: MTRVPRGYIARRRRAKMRSFASNFRGAHLRLNRMITQQVRRAFVSSHRDRVRQKRDFRRLWISRINAATRIHKVFDNYSKLIHNLYKKELILNRKILAQVAVLNSNNLYTISNKIKIIN
SIO_010081: OrsajCp051
subclass of: SO_0000673
so part of: OrsajCp051
location: complement(66355..66714)
location: region:66355-66714:-1
so has part: feature:66355-66714:-1:exon

NP_039409.1
type: Protein
SIO_000068: ncbiprotein

P12139
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:66355-66714:-1:exon

OrsajCp102
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rps12
locus tag: OrsajCp102
trans splicing: true
so part of: sequence
location: join(complement(67390..67503),125845..126645)
location: region:67390-126645:1
so has part: feature:67390-67503:-1:exon
so has part: feature:125845-126645:1:exon
subclass of: SO_0000010

3131385
type: Gene
SIO_000068: ncbigene

position:67390:1
position: 67390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126645:-1
position: 126645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67390-67503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125845-126645:1:exon

position:125845:1
position: 125845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126645:1
position: 126645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OrsajCp102
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rps12
locus tag: OrsajCp102
trans splicing: true
codon start: 1
transl table: 11
product: ribosomal protein S12
translation: MPTVKQLIRNARQPIRNARKSAALKGCPQRRGTCARVYTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYRIIRGALDAVAVKNRQQGRSKYGVKKPKK
SIO_010081: OrsajCp102
subclass of: SO_0000673
so part of: OrsajCp102
location: join(complement(67390..67503),125845..126076,126617..126645)
location: region:67390-126645:1
so has part: feature:67390-67503:-1:exon
so has part: feature:125845-126076:1:exon
so has part: feature:126617-126645:1:exon

NP_039457.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67390-67503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125845-126076:1:exon

position:126076:1
position: 126076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126617-126645:1:exon

position:126617:1
position: 126617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OrsajCp052
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: clpP
locus tag: OrsajCp052
so part of: sequence
location: complement(67638..68288)
location: region:67638-68288:-1
so has part: feature:67638-68288:-1:exon
subclass of: SO_0000010

3131474
type: Gene
SIO_000068: ncbigene

position:67638:-1
position: 67638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68288:-1
position: 68288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67638-68288:-1:exon

OrsajCp052
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: clpP
locus tag: OrsajCp052
note: ORF216
codon start: 1
transl table: 11
product: ATP-dependent Clp protease proteolytic subunit
translation: MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGSSDIFLFINSPGGWLISGMAIFDTMQTVTPNIYTTCLGIAASMPSFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIVGDEMLDEHCDTDPVWFPEMFKDW
SIO_010081: OrsajCp052
subclass of: SO_0000673
so part of: OrsajCp052
location: complement(67638..68288)
location: region:67638-68288:-1
so has part: feature:67638-68288:-1:exon

NP_039410.1
type: Protein
SIO_000068: ncbiprotein

P12209
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:67638-68288:-1:exon

OrsajCp053
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psbB
locus tag: OrsajCp053
so part of: sequence
location: 68799..70325
location: region:68799-70325:1
so has part: feature:68799-70325:1:exon
subclass of: SO_0000010

3131410
type: Gene
SIO_000068: ncbigene

position:68799:1
position: 68799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70325:1
position: 70325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68799-70325:1:exon

OrsajCp053
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psbB
locus tag: OrsajCp053
note: photosystem II P680 chlorophyll A apoprotein; PSII 47 kDa protein
codon start: 1
transl table: 11
product: photosystem II 47 kDa protein
translation: MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSISGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQAVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSDGLAENLSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDEEGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRSQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFADVFAGIDPDLDAQVEFGAIQKRGDPTTGRQPV
SIO_010081: OrsajCp053
subclass of: SO_0000673
so part of: OrsajCp053
location: 68799..70325
location: region:68799-70325:1
so has part: feature:68799-70325:1:exon

NP_039411.1
type: Protein
SIO_000068: ncbiprotein

P12157
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:68799-70325:1:exon

OrsajCp054
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psbT
locus tag: OrsajCp054
so part of: sequence
location: 70490..70597
location: region:70490-70597:1
so has part: feature:70490-70597:1:exon
subclass of: SO_0000010

3131475
type: Gene
SIO_000068: ncbigene

position:70490:1
position: 70490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70597:1
position: 70597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70490-70597:1:exon

OrsajCp054
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psbT
locus tag: OrsajCp054
note: ORF35
codon start: 1
transl table: 11
product: photosystem II protein T
translation: MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKVK
SIO_010081: OrsajCp054
subclass of: SO_0000673
so part of: OrsajCp054
location: 70490..70597
location: region:70490-70597:1
so has part: feature:70490-70597:1:exon

NP_039412.1
type: Protein
SIO_000068: ncbiprotein

P12183
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:70490-70597:1:exon

OrsajCp055
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psbN
locus tag: OrsajCp055
so part of: sequence
location: complement(70646..70777)
location: region:70646-70777:-1
so has part: feature:70646-70777:-1:exon
subclass of: SO_0000010

3131420
type: Gene
SIO_000068: ncbigene

position:70646:-1
position: 70646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70777:-1
position: 70777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70646-70777:-1:exon

OrsajCp055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psbN
locus tag: OrsajCp055
note: photosystem II reaction center N protein
codon start: 1
transl table: 11
product: photosystem II protein N
translation: METATLVAISISGLLVSFTGYALYTAFGQPSQQLRDPFEEHGD
SIO_010081: OrsajCp055
subclass of: SO_0000673
so part of: OrsajCp055
location: complement(70646..70777)
location: region:70646-70777:-1
so has part: feature:70646-70777:-1:exon

NP_039413.1
type: Protein
SIO_000068: ncbiprotein

P12171
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:70646-70777:-1:exon

OrsajCp056
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psbH
locus tag: OrsajCp056
so part of: sequence
location: 70881..71102
location: region:70881-71102:1
so has part: feature:70881-71102:1:exon
subclass of: SO_0000010

3131415
type: Gene
SIO_000068: ncbigene

position:70881:1
position: 70881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71102:1
position: 71102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70881-71102:1:exon

OrsajCp056
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psbH
locus tag: OrsajCp056
note: photosystem II reaction center protein H; photosystem II phosphoprotein
codon start: 1
transl table: 11
product: photosystem II protein H
translation: MATQTVEDSSRPGPRQTRVGNLLKPLNSEYGKVAPGWGTTPFMGVAMALFAVFLSIILEIYNSSVLLDGILMN
SIO_010081: OrsajCp056
subclass of: SO_0000673
so part of: OrsajCp056
location: 70881..71102
location: region:70881-71102:1
so has part: feature:70881-71102:1:exon

NP_039414.1
type: Protein
SIO_000068: ncbiprotein

P09449
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:70881-71102:1:exon

OrsajCp057
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: petB
locus tag: OrsajCp057
so part of: sequence
location: 71232..72690
location: region:71232-72690:1
so has part: feature:71232-72690:1:exon
subclass of: SO_0000010

3131403
type: Gene
SIO_000068: ncbigene

position:71232:1
position: 71232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72690:1
position: 72690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71232-72690:1:exon

OrsajCp057
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: petB
locus tag: OrsajCp057
codon start: 1
transl table: 11
product: cytochrome b6
translation: MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFSSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL
SIO_010081: OrsajCp057
subclass of: SO_0000673
so part of: OrsajCp057
location: join(71232..71237,72049..72690)
location: region:71232-72690:1
so has part: feature:71232-71237:1:exon
so has part: feature:72049-72690:1:exon

NP_039415.1
type: Protein
SIO_000068: ncbiprotein

P12123
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:71232-71237:1:exon

position:71237:1
position: 71237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:72049-72690:1:exon

position:72049:1
position: 72049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OrsajCp057
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: petB
locus tag: OrsajCp057
number: 1
SIO_010081: OrsajCp057
subclass of: SO_0000673
so part of: OrsajCp057
location: 71232..71237
location: region:71232-71237:1
so has part: feature:71232-71237:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71232-71237:1:exon

OrsajCp057
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: petB
locus tag: OrsajCp057
number: 2
SIO_010081: OrsajCp057
subclass of: SO_0000673
so part of: OrsajCp057
location: 72049..72690
location: region:72049-72690:1
so has part: feature:72049-72690:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72049-72690:1:exon

OrsajCp058
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: petD
locus tag: OrsajCp058
so part of: sequence
location: 72883..74110
location: region:72883-74110:1
so has part: feature:72883-74110:1:exon
subclass of: SO_0000010

3131404
type: Gene
SIO_000068: ncbigene

position:72883:1
position: 72883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74110:1
position: 74110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72883-74110:1:exon

OrsajCp058
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: petD
locus tag: OrsajCp058
note: cytochrome b6/f complex subunit 4
codon start: 1
transl table: 11
product: cytochrome b6/f complex subunit IV
translation: MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPTGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIEKSLTLGLF
SIO_010081: OrsajCp058
subclass of: SO_0000673
so part of: OrsajCp058
location: join(72883..72890,73636..74110)
location: region:72883-74110:1
so has part: feature:72883-72890:1:exon
so has part: feature:73636-74110:1:exon

NP_039416.1
type: Protein
SIO_000068: ncbiprotein

P12118
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:72883-72890:1:exon

position:72890:1
position: 72890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73636-74110:1:exon

position:73636:1
position: 73636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OrsajCp058
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: petD
locus tag: OrsajCp058
number: 1
SIO_010081: OrsajCp058
subclass of: SO_0000673
so part of: OrsajCp058
location: 72883..72890
location: region:72883-72890:1
so has part: feature:72883-72890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72883-72890:1:exon

OrsajCp058
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: petD
locus tag: OrsajCp058
number: 2
SIO_010081: OrsajCp058
subclass of: SO_0000673
so part of: OrsajCp058
location: 73636..74110
location: region:73636-74110:1
so has part: feature:73636-74110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73636-74110:1:exon

OrsajCp059
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rpoA
locus tag: OrsajCp059
so part of: sequence
location: complement(74330..75343)
location: region:74330-75343:-1
so has part: feature:74330-75343:-1:exon
subclass of: SO_0000010

3131431
type: Gene
SIO_000068: ncbigene

position:74330:-1
position: 74330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75343:-1
position: 75343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74330-75343:-1:exon

OrsajCp059
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rpoA
locus tag: OrsajCp059
note: RNA polymerase alpha chain
codon start: 1
transl table: 11
product: RNA polymerase alpha subunit
translation: MVREEVAGSTQTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTVGIALRRALLGETEGTCITHAKFGSVPHEYSTIAGIEESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSFQKRLTNLKKNKKRIPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMQDGKQIWDTLEKHLPMDLPKNKF
SIO_010081: OrsajCp059
subclass of: SO_0000673
so part of: OrsajCp059
location: complement(74330..75343)
location: region:74330-75343:-1
so has part: feature:74330-75343:-1:exon

NP_039417.1
type: Protein
SIO_000068: ncbiprotein

P12090
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:74330-75343:-1:exon

OrsajCp060
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rps11
locus tag: OrsajCp060
so part of: sequence
location: complement(75407..75838)
location: region:75407-75838:-1
so has part: feature:75407-75838:-1:exon
subclass of: SO_0000010

3131435
type: Gene
SIO_000068: ncbigene

position:75407:-1
position: 75407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75838:-1
position: 75838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75407-75838:-1:exon

OrsajCp060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rps11
locus tag: OrsajCp060
note: 30S ribosomal protein S11
codon start: 1
transl table: 11
product: ribosomal protein S11
translation: MTKAIPKIGSRRKVRIGLRRNARFSLRKSARRITKGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVDAIRTVGLQRAEVMVKGAGSGRDAALRAIAKSGVRLSCIRDVTPMPHNGCRPPKKRRL
SIO_010081: OrsajCp060
subclass of: SO_0000673
so part of: OrsajCp060
location: complement(75407..75838)
location: region:75407-75838:-1
so has part: feature:75407-75838:-1:exon

NP_039418.1
type: Protein
SIO_000068: ncbiprotein

P12096
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:75407-75838:-1:exon

OrsajCp061
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
alternative label: secX
gene: rpl36
locus tag: OrsajCp061
gene synonym: secX
so part of: sequence
location: complement(76013..76126)
location: region:76013-76126:-1
so has part: feature:76013-76126:-1:exon
subclass of: SO_0000010

3131430
type: Gene
SIO_000068: ncbigene

position:76013:-1
position: 76013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76126:-1
position: 76126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76013-76126:-1:exon

OrsajCp061
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
alternative label: secX
gene: rpl36
locus tag: OrsajCp061
gene synonym: secX
note: 50S ribosomal protein L36
codon start: 1
transl table: 11
product: ribosomal protein L36
translation: MKIRASVRKICTKCRLIRRRGRIRVICSNPKHKQRQG
SIO_010081: OrsajCp061
subclass of: SO_0000673
so part of: OrsajCp061
location: complement(76013..76126)
location: region:76013-76126:-1
so has part: feature:76013-76126:-1:exon

NP_039419.1
type: Protein
SIO_000068: ncbiprotein

P12143
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:76013-76126:-1:exon

OrsajCp062
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: infA
locus tag: OrsajCp062
so part of: sequence
location: complement(76238..76561)
location: region:76238-76561:-1
so has part: feature:76238-76561:-1:exon
subclass of: SO_0000010

3131394
type: Gene
SIO_000068: ncbigene

position:76238:-1
position: 76238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76561:-1
position: 76561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76238-76561:-1:exon

OrsajCp062
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: infA
locus tag: OrsajCp062
codon start: 1
transl table: 11
product: translation initiation factor 1
translation: MTEKKNRREKKNPREAKITFEGLVMEALPNGMFRVRLENDTIILGYISGKIRSSSIRILMGDRVKIEVSRYDSSKGRIIYRLPHKDSKRTEDSKDTEDLKDTKDSKG
SIO_010081: OrsajCp062
subclass of: SO_0000673
so part of: OrsajCp062
location: complement(76238..76561)
location: region:76238-76561:-1
so has part: feature:76238-76561:-1:exon

NP_039420.1
type: Protein
SIO_000068: ncbiprotein

P12135
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:76238-76561:-1:exon

OrsajCp063
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rps8
locus tag: OrsajCp063
so part of: sequence
location: complement(76698..77108)
location: region:76698-77108:-1
so has part: feature:76698-77108:-1:exon
subclass of: SO_0000010

3131446
type: Gene
SIO_000068: ncbigene

position:76698:-1
position: 76698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77108:-1
position: 77108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76698-77108:-1:exon

OrsajCp063
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rps8
locus tag: OrsajCp063
note: 30S ribosomal protein S8
codon start: 1
transl table: 11
product: ribosomal protein S8
translation: MGKDTIADLLTSIRNADMNKKGTVRVVSTNITENIVKILLREGFIESVRKHQESNRYFLVSTLRHQKRKTRKGIYRTRTFLKRISRPGLRIYANYQGIPKVLGGMGIAILSTSRGIMTDREARLNRIGGEVLCYIW
SIO_010081: OrsajCp063
subclass of: SO_0000673
so part of: OrsajCp063
location: complement(76698..77108)
location: region:76698-77108:-1
so has part: feature:76698-77108:-1:exon

NP_039421.1
type: Protein
SIO_000068: ncbiprotein

P12148
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:76698-77108:-1:exon

OrsajCp064
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rpl14
locus tag: OrsajCp064
so part of: sequence
location: complement(77248..77619)
location: region:77248-77619:-1
so has part: feature:77248-77619:-1:exon
subclass of: SO_0000010

3131422
type: Gene
SIO_000068: ncbigene

position:77248:-1
position: 77248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77619:-1
position: 77619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77248-77619:-1:exon

OrsajCp064
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rpl14
locus tag: OrsajCp064
note: 50S ribosomal protein L14
codon start: 1
transl table: 11
product: ribosomal protein L14
translation: MIQPQTLLNVADNSGARKLMCIRVIGAASNQRYARIGDVIVAVIKDAVPQMPLERSEVIRAVIVRTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAIAEELRELNFTKIVSLAPEVL
SIO_010081: OrsajCp064
subclass of: SO_0000673
so part of: OrsajCp064
location: complement(77248..77619)
location: region:77248-77619:-1
so has part: feature:77248-77619:-1:exon

NP_039422.1
type: Protein
SIO_000068: ncbiprotein

P12137
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:77248-77619:-1:exon

OrsajCp065
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rpl16
locus tag: OrsajCp065
so part of: sequence
location: complement(77729..79198)
location: region:77729-79198:-1
so has part: feature:77729-79198:-1:exon
subclass of: SO_0000010

3131423
type: Gene
SIO_000068: ncbigene

position:77729:-1
position: 77729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79198:-1
position: 79198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77729-79198:-1:exon

OrsajCp065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rpl16
locus tag: OrsajCp065
codon start: 1
transl table: 11
product: ribosomal protein L16
translation: MLSPKRTRFRKQHRGRMKGKSYRGNCICFGRYALQALEPTWITARQIEAGRRAMTRYARRGGKIWVRIFPDKPVTIRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVSETVARRAISIAASKMPIRSQFLRLEI
SIO_010081: OrsajCp065
subclass of: SO_0000673
so part of: OrsajCp065
location: complement(join(77729..78130,79190..79198))
location: region:77729-79198:-1
so has part: feature:79190-79198:-1:exon
so has part: feature:77729-78130:-1:exon

NP_039423.1
type: Protein
SIO_000068: ncbiprotein

P12138
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:79190-79198:-1:exon

position:79190:-1
position: 79190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77729-78130:-1:exon

position:78130:-1
position: 78130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OrsajCp065
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: rpl16
locus tag: OrsajCp065
number: 2
SIO_010081: OrsajCp065
subclass of: SO_0000673
so part of: OrsajCp065
location: complement(77729..78130)
location: region:77729-78130:-1
so has part: feature:77729-78130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77729-78130:-1:exon

OrsajCp065
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: rpl16
locus tag: OrsajCp065
number: 1
SIO_010081: OrsajCp065
subclass of: SO_0000673
so part of: OrsajCp065
location: complement(79190..79198)
location: region:79190-79198:-1
so has part: feature:79190-79198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79190-79198:-1:exon

OrsajCp066
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rps3
locus tag: OrsajCp066
so part of: sequence
location: complement(79344..80063)
location: region:79344-80063:-1
so has part: feature:79344-80063:-1:exon
subclass of: SO_0000010

3131443
type: Gene
SIO_000068: ncbigene

position:79344:-1
position: 79344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80063:-1
position: 80063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79344-80063:-1:exon

OrsajCp066
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rps3
locus tag: OrsajCp066
note: 30S ribosomal protein S3
codon start: 1
transl table: 11
product: ribosomal protein S3
translation: MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIEADSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTDIKGVKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE
SIO_010081: OrsajCp066
subclass of: SO_0000673
so part of: OrsajCp066
location: complement(79344..80063)
location: region:79344-80063:-1
so has part: feature:79344-80063:-1:exon

NP_039424.1
type: Protein
SIO_000068: ncbiprotein

P12146
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:79344-80063:-1:exon

OrsajCp067
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rpl22
locus tag: OrsajCp067
so part of: sequence
location: complement(80119..80568)
location: region:80119-80568:-1
so has part: feature:80119-80568:-1:exon
subclass of: SO_0000010

3131426
type: Gene
SIO_000068: ncbigene

position:80119:-1
position: 80119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80568:-1
position: 80568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80119-80568:-1:exon

OrsajCp067
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rpl22
locus tag: OrsajCp067
codon start: 1
transl table: 11
product: ribosomal protein L22
translation: MTSFKLVKYTPRIKKKKSGLRKLARKVPTDRLLKFERVFKAQKRIHMSVFKVQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKANLFITKAEVSRSTIMNKFRPRARGRSSPIKKTMCHITIVLNIVKKSK
SIO_010081: OrsajCp067
subclass of: SO_0000673
so part of: OrsajCp067
location: complement(80119..80568)
location: region:80119-80568:-1
so has part: feature:80119-80568:-1:exon

NP_039425.1
type: Protein
SIO_000068: ncbiprotein

P12140
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:80119-80568:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 39947
note: [JLB]; Junction LSC-IR
so part of: sequence
location: 80592..80593
location: region:80592-80593:1
so has part: feature:80592-80593:1:region

position:80592:1
position: 80592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80593:1
position: 80593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80592-80593:1:region

OrsajCp068
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp068
so part of: sequence
location: complement(80915..81163)
location: region:80915-81163:-1
so has part: feature:80915-81163:-1:exon
subclass of: SO_0000010

3131476
type: Gene
SIO_000068: ncbigene

position:80915:-1
position: 80915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81163:-1
position: 81163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80915-81163:-1:exon

OrsajCp068
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp068
note: ORF82
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENCIFGICNNGMGERRELNPRMVDSQSTALIHLATSAPYPAKGFSLFSIHHYSIYSDLHTSIEILDIECHSLKWKKRSNQL
SIO_010081: OrsajCp068
subclass of: SO_0000673
so part of: OrsajCp068
location: complement(80915..81163)
location: region:80915-81163:-1
so has part: feature:80915-81163:-1:exon

NP_039426.1
type: Protein
SIO_000068: ncbiprotein

Q37130
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:80915-81163:-1:exon

OrsajCt145
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt145
so part of: sequence
location: 81050..81124
location: region:81050-81124:1
so has part: feature:81050-81124:1:exon
subclass of: SO_0000663

3131360
type: Gene
SIO_000068: ncbigene

position:81050:1
position: 81050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81124:1
position: 81124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81050-81124:1:exon

OrsajCt145
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt145
product: tRNA-His
note: trnH tRNA-His(GUG)
SIO_010081: OrsajCt145
subclass of: SO_0000673
so part of: OrsajCt145
location: 81050..81124
location: region:81050-81124:1
so has part: feature:81050-81124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81050-81124:1:exon

OrsajCp069
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rpl2
locus tag: OrsajCp069
so part of: sequence
location: complement(81180..82664)
location: region:81180-82664:-1
so has part: feature:81180-82664:-1:exon
subclass of: SO_0000010

3131421
type: Gene
SIO_000068: ncbigene

position:81180:-1
position: 81180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82664:-1
position: 82664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81180-82664:-1:exon

OrsajCp069
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rpl2
locus tag: OrsajCp069
note: 50S ribosomal protein L2; acg start
codon start: 1
transl except: (pos:complement(82662..82664),aa:Met)
transl table: 11
product: ribosomal protein L2
translation: MAKHLYKTPIPSTRKGTIDRQVKSNPRNNLIHGRHRCGKGRNSRGIITARHRGGGHKRLYRKIDFRRNQKDISGRIVTIEYDPNRNAYICLIHYGDGEKGYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAIHNIEITRGRGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRRTRKRKKYSDSFILRRRK
SIO_010081: OrsajCp069
subclass of: SO_0000673
so part of: OrsajCp069
location: complement(join(81180..81610,82274..82664))
location: region:81180-82664:-1
so has part: feature:82274-82664:-1:exon
so has part: feature:81180-81610:-1:exon

NP_039427.2
type: Protein
SIO_000068: ncbiprotein

P17351
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:82274-82664:-1:exon

position:82274:-1
position: 82274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:81180-81610:-1:exon

position:81610:-1
position: 81610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OrsajCp070
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp070
so part of: sequence
location: 81286..81699
location: region:81286-81699:1
so has part: feature:81286-81699:1:exon
subclass of: SO_0000010

3131477
type: Gene
SIO_000068: ncbigene

position:81286:1
position: 81286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81699:1
position: 81699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81286-81699:1:exon

OrsajCp070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp070
note: ORF137
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSFLSKNPFPNCTSFFQSIRLSRCI
SIO_010081: OrsajCp070
subclass of: SO_0000673
so part of: OrsajCp070
location: 81286..81699
location: region:81286-81699:1
so has part: feature:81286-81699:1:exon

NP_039428.1
type: Protein
SIO_000068: ncbiprotein

Q36996
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:81286-81699:1:exon

OrsajCp071
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rpl23
locus tag: OrsajCp071
so part of: sequence
location: complement(82683..82964)
location: region:82683-82964:-1
so has part: feature:82683-82964:-1:exon
subclass of: SO_0000010

3131428
type: Gene
SIO_000068: ncbigene

position:82683:-1
position: 82683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82964:-1
position: 82964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82683-82964:-1:exon

OrsajCp071
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rpl23
locus tag: OrsajCp071
note: 50S ribosomal protein L23
codon start: 1
transl table: 11
product: ribosomal protein L23
translation: MDGIKYAVFTEKSLRLLGKNQYTFNVESGFTKTEIKHWVELFFGVKVVAVNSHRLPGKGRRMGPILGHTMHYRRMIITLQPGYSIPLLDREKN
SIO_010081: OrsajCp071
subclass of: SO_0000673
so part of: OrsajCp071
location: complement(82683..82964)
location: region:82683-82964:-1
so has part: feature:82683-82964:-1:exon

NP_039429.1
type: Protein
SIO_000068: ncbiprotein

P12097
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:82683-82964:-1:exon

OrsajCt146
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt146
so part of: sequence
location: complement(83139..83212)
location: region:83139-83212:-1
so has part: feature:83139-83212:-1:exon
subclass of: SO_0000663

3131361
type: Gene
SIO_000068: ncbigene

position:83139:-1
position: 83139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83212:-1
position: 83212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83139-83212:-1:exon

OrsajCt146
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt146
product: tRNA-Ile
note: trnI; tRNA-Ile(CAU)
SIO_010081: OrsajCt146
subclass of: SO_0000673
so part of: OrsajCt146
location: complement(83139..83212)
location: region:83139-83212:-1
so has part: feature:83139-83212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83139-83212:-1:exon

OrsajCp072
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp072
so part of: sequence
location: 83534..83620
location: region:83534-83620:1
so has part: feature:83534-83620:1:exon
subclass of: SO_0000010

3131478
type: Gene
SIO_000068: ncbigene

position:83534:1
position: 83534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83620:1
position: 83620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83534-83620:1:exon

OrsajCp072
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp072
note: ORF28
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNYEFNRSSLAERRIFLAHHLFPNLVWG
SIO_010081: OrsajCp072
subclass of: SO_0000673
so part of: OrsajCp072
location: 83534..83620
location: region:83534-83620:1
so has part: feature:83534-83620:1:exon

NP_039430.1
type: Protein
SIO_000068: ncbiprotein

Q37005
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:83534-83620:1:exon

OrsajCp074
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp074
so part of: sequence
location: 83997..84746
location: region:83997-84746:1
so has part: feature:83997-84746:1:exon
subclass of: SO_0000010

3131479
type: Gene
SIO_000068: ncbigene

position:83997:1
position: 83997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84746:1
position: 84746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83997-84746:1:exon

OrsajCp074
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp074
note: ORF249
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKDETLLVFTLVVSSVSVFLFGILLFMVLISATRDFRERTKSKLVKIMIWAGIVVITFAIAVRIYPIFIFLLKERIKPLVEALYDKLPWIWEVSLSRYWDRLIDFLDRYLWACAQRIQTGIRKQKGEFVVTFSCRVKKRLYARAIEVGIHLSLLSNLFWILKTTLAVGYRLLWVLYYIISFEGFLGSFRLYLVYFGFYCLLFSGKWLRTSEDRGERQAEISGILLRGMLIECAFSVLCLEEDSNLHAL
SIO_010081: OrsajCp074
subclass of: SO_0000673
so part of: OrsajCp074
location: 83997..84746
location: region:83997-84746:1
so has part: feature:83997-84746:1:exon

NP_039431.1
type: Protein
SIO_000068: ncbiprotein

Q37066
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:83997-84746:1:exon

OrsajCt147
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt147
so part of: sequence
location: complement(84711..84791)
location: region:84711-84791:-1
so has part: feature:84711-84791:-1:exon
subclass of: SO_0000663

3131362
type: Gene
SIO_000068: ncbigene

position:84711:-1
position: 84711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84791:-1
position: 84791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84711-84791:-1:exon

OrsajCt147
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt147
product: tRNA-Leu
note: trnL; tRNA-Leu(CAA)
SIO_010081: OrsajCt147
subclass of: SO_0000673
so part of: OrsajCt147
location: complement(84711..84791)
location: region:84711-84791:-1
so has part: feature:84711-84791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84711-84791:-1:exon

OrsajCp075
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
alternative label: ndh2
gene: ndhB
locus tag: OrsajCp075
gene synonym: ndh2
so part of: sequence
location: complement(85395..87639)
location: region:85395-87639:-1
so has part: feature:85395-87639:-1:exon
subclass of: SO_0000010

3131397
type: Gene
SIO_000068: ncbigene

position:85395:-1
position: 85395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87639:-1
position: 87639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85395-87639:-1:exon

OrsajCp075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
alternative label: ndh2
gene: ndhB
locus tag: OrsajCp075
gene synonym: ndh2
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 2
translation: MIWHVQNENFILDSTRIFMKAFHLLLFQGSFIFPECILIFGLILLLMIDLTSDQKDRPWFYFISSTSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALISITVGLGFKLSPAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRILDIPFYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIVKLLMTGRNQEITPYVRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDTLF
SIO_010081: OrsajCp075
subclass of: SO_0000673
so part of: OrsajCp075
location: complement(join(85395..86150,86863..87639))
location: region:85395-87639:-1
so has part: feature:86863-87639:-1:exon
so has part: feature:85395-86150:-1:exon

NP_039432.1
type: Protein
SIO_000068: ncbiprotein

P12125
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:86863-87639:-1:exon

position:86863:-1
position: 86863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:85395-86150:-1:exon

position:86150:-1
position: 86150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OrsajCp075
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
alternative label: ndh2
gene: ndhB
locus tag: OrsajCp075
gene synonym: ndh2
number: 2
SIO_010081: OrsajCp075
subclass of: SO_0000673
so part of: OrsajCp075
location: complement(85395..86150)
location: region:85395-86150:-1
so has part: feature:85395-86150:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85395-86150:-1:exon

OrsajCp075
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
alternative label: ndh2
gene: ndhB
locus tag: OrsajCp075
gene synonym: ndh2
number: 1
SIO_010081: OrsajCp075
subclass of: SO_0000673
so part of: OrsajCp075
location: complement(86863..87639)
location: region:86863-87639:-1
so has part: feature:86863-87639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86863-87639:-1:exon

OrsajCp076
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rps7
locus tag: OrsajCp076
so part of: sequence
location: complement(87944..88414)
location: region:87944-88414:-1
so has part: feature:87944-88414:-1:exon
subclass of: SO_0000010

3131445
type: Gene
SIO_000068: ncbigene

position:87944:-1
position: 87944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88414:-1
position: 88414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87944-88414:-1:exon

OrsajCp076
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rps7
locus tag: OrsajCp076
note: 30S ribosomal protein S7
codon start: 1
transl table: 11
product: ribosomal protein S7
translation: MSRRGTAEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAIRRVTPNIGVKTRRNKKGSTRKVPIEIGSKQGRALAIRWLLEASQKRPGRNMAFKLSSELVDAAKGGGGAIRKKEATHRMAEANRALAHFR
SIO_010081: OrsajCp076
subclass of: SO_0000673
so part of: OrsajCp076
location: complement(87944..88414)
location: region:87944-88414:-1
so has part: feature:87944-88414:-1:exon

NP_039433.1
type: Protein
SIO_000068: ncbiprotein

P05424
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:87944-88414:-1:exon

OrsajCp001
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: rps12
locus tag: OrsajCp001
number: 3
SIO_010081: OrsajCp001
subclass of: SO_0000673
so part of: OrsajCp001
location: complement(88473..88501)
location: region:88473-88501:-1
so has part: feature:88473-88501:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88473-88501:-1:exon

OrsajCp001
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: rps12
locus tag: OrsajCp001
number: 2
SIO_010081: OrsajCp001
subclass of: SO_0000673
so part of: OrsajCp001
location: complement(89042..89273)
location: region:89042-89273:-1
so has part: feature:89042-89273:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89042-89273:-1:exon

OrsajCp077
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp077
so part of: sequence
location: complement(90227..90442)
location: region:90227-90442:-1
so has part: feature:90227-90442:-1:exon
subclass of: SO_0000010

3131480
type: Gene
SIO_000068: ncbigene

position:90227:-1
position: 90227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90442:-1
position: 90442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90227-90442:-1:exon

OrsajCp077
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp077
note: ORF72
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNFIVIEIHVLPRQNFELAILLPNRQRLTSVERMIHSDRYEDPTTLHCRIHVPYLKRVDLCASLMVQSSSC
SIO_010081: OrsajCp077
subclass of: SO_0000673
so part of: OrsajCp077
location: complement(90227..90442)
location: region:90227-90442:-1
so has part: feature:90227-90442:-1:exon

NP_039434.1
type: Protein
SIO_000068: ncbiprotein

Q36983
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:90227-90442:-1:exon

OrsajCp078
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp078
so part of: sequence
location: complement(90501..90659)
location: region:90501-90659:-1
so has part: feature:90501-90659:-1:exon
subclass of: SO_0000010

3131481
type: Gene
SIO_000068: ncbigene

position:90501:-1
position: 90501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90659:-1
position: 90659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90501-90659:-1:exon

OrsajCp078
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp078
note: ORF85
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIWVAPSSCAKDLTISEGTGATFLFNFHSRVSYLFPRPFLRPRNMKWTNSFS
SIO_010081: OrsajCp078
subclass of: SO_0000673
so part of: OrsajCp078
location: complement(90501..90659)
location: region:90501-90659:-1
so has part: feature:90501-90659:-1:exon

NP_039435.1
type: Protein
SIO_000068: ncbiprotein

Q32766
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:90501-90659:-1:exon

OrsajCt148
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt148
so part of: sequence
location: 90996..91067
location: region:90996-91067:1
so has part: feature:90996-91067:1:exon
subclass of: SO_0000663

3131363
type: Gene
SIO_000068: ncbigene

position:90996:1
position: 90996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91067:1
position: 91067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90996-91067:1:exon

OrsajCt148
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt148
product: tRNA-Val
note: trnV; tRNA-Val(GAC)
SIO_010081: OrsajCt148
subclass of: SO_0000673
so part of: OrsajCt148
location: 90996..91067
location: region:90996-91067:1
so has part: feature:90996-91067:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90996-91067:1:exon

OrsajCr113
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCr113
so part of: sequence
location: 91299..92789
location: region:91299-92789:1
so has part: feature:91299-92789:1:exon
subclass of: SO_0000573

3131364
type: Gene
SIO_000068: ncbigene

position:91299:1
position: 91299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92789:1
position: 92789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91299-92789:1:exon

OrsajCr113
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 39947
locus tag: OrsajCr113
product: 16S ribosomal RNA
SIO_010081: OrsajCr113
subclass of: SO_0000673
so part of: OrsajCr113
location: 91299..92789
location: region:91299-92789:1
so has part: feature:91299-92789:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91299-92789:1:exon

OrsajCt149
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt149
so part of: sequence
location: 93100..94118
location: region:93100-94118:1
so has part: feature:93100-94118:1:exon
subclass of: SO_0000663

3131365
type: Gene
SIO_000068: ncbigene

position:93100:1
position: 93100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94118:1
position: 94118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93100-94118:1:exon

OrsajCt149
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt149
product: tRNA-Ile
note: trnI; tRNA-Ile(GAU)
SIO_010081: OrsajCt149
subclass of: SO_0000673
so part of: OrsajCt149
location: join(93100..93136,94084..94118)
location: region:93100-94118:1
so has part: feature:93100-93136:1:exon
so has part: feature:94084-94118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93100-93136:1:exon

position:93136:1
position: 93136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94084-94118:1:exon

position:94084:1
position: 94084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OrsajCp079
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp079
so part of: sequence
location: 93241..93642
location: region:93241-93642:1
so has part: feature:93241-93642:1:exon
subclass of: SO_0000010

3131482
type: Gene
SIO_000068: ncbigene

position:93241:1
position: 93241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93642:1
position: 93642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93241-93642:1:exon

OrsajCp079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp079
note: ORF133; ORF within trnI intron
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAYSSCLNRSLKPNKLLLRRIDGAIQVRSHVDLTFYSLVGSGRSGGGTTAPLFSRIHTSLISVWRAISRAQVEVRPQWENGAPNNASSQTKNYEITLSFWGDGGIVPFEPFFHAFPGGLEKAAINRTSLILPS
SIO_010081: OrsajCp079
subclass of: SO_0000673
so part of: OrsajCp079
location: 93241..93642
location: region:93241-93642:1
so has part: feature:93241-93642:1:exon

NP_039436.1
type: Protein
SIO_000068: ncbiprotein

P12173
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:93241-93642:1:exon

OrsajCt150
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt150
so part of: sequence
location: 94183..95067
location: region:94183-95067:1
so has part: feature:94183-95067:1:exon
subclass of: SO_0000663

3131366
type: Gene
SIO_000068: ncbigene

position:94183:1
position: 94183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95067:1
position: 95067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94183-95067:1:exon

OrsajCt150
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt150
product: tRNA-Ala
SIO_010081: OrsajCt150
subclass of: SO_0000673
so part of: OrsajCt150
location: join(94183..94220,95033..95067)
location: region:94183-95067:1
so has part: feature:94183-94220:1:exon
so has part: feature:95033-95067:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94183-94220:1:exon

position:94220:1
position: 94220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95033-95067:1:exon

position:95033:1
position: 95033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OrsajCp080
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: ORF109
locus tag: OrsajCp080
note: ORF within trnA intron
pseudo: true
so part of: sequence
location: 94683..95012
location: region:94683-95012:1
so has part: feature:94683-95012:1:exon

3131386
type: Gene
SIO_000068: ncbigene

position:94683:1
position: 94683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95012:1
position: 95012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94683-95012:1:exon

OrsajCr114
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCr114
so part of: sequence
location: 95213..98096
location: region:95213-98096:1
so has part: feature:95213-98096:1:exon
subclass of: SO_0000573

3131367
type: Gene
SIO_000068: ncbigene

position:95213:1
position: 95213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98096:1
position: 98096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95213-98096:1:exon

OrsajCr114
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 39947
locus tag: OrsajCr114
product: 23S ribosomal RNA
SIO_010081: OrsajCr114
subclass of: SO_0000673
so part of: OrsajCr114
location: 95213..98096
location: region:95213-98096:1
so has part: feature:95213-98096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95213-98096:1:exon

OrsajCr115
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCr115
so part of: sequence
location: 98192..98286
location: region:98192-98286:1
so has part: feature:98192-98286:1:exon
subclass of: SO_0000573

3131368
type: Gene
SIO_000068: ncbigene

position:98192:1
position: 98192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98286:1
position: 98286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98192-98286:1:exon

OrsajCr115
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 39947
locus tag: OrsajCr115
product: 4.5S ribosomal RNA
SIO_010081: OrsajCr115
subclass of: SO_0000673
so part of: OrsajCr115
location: 98192..98286
location: region:98192-98286:1
so has part: feature:98192-98286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98192-98286:1:exon

OrsajCr116
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCr116
so part of: sequence
location: 98514..98634
location: region:98514-98634:1
so has part: feature:98514-98634:1:exon
subclass of: SO_0000573

3131369
type: Gene
SIO_000068: ncbigene

position:98514:1
position: 98514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98634:1
position: 98634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98514-98634:1:exon

OrsajCr116
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 39947
locus tag: OrsajCr116
product: 5S ribosomal RNA
SIO_010081: OrsajCr116
subclass of: SO_0000673
so part of: OrsajCr116
location: 98514..98634
location: region:98514-98634:1
so has part: feature:98514-98634:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98514-98634:1:exon

OrsajCt151
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt151
so part of: sequence
location: 98891..98964
location: region:98891-98964:1
so has part: feature:98891-98964:1:exon
subclass of: SO_0000663

3131370
type: Gene
SIO_000068: ncbigene

position:98891:1
position: 98891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98964:1
position: 98964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98891-98964:1:exon

OrsajCt151
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt151
product: tRNA-Arg
note: trnR; tRNA-Arg(ACG)
SIO_010081: OrsajCt151
subclass of: SO_0000673
so part of: OrsajCt151
location: 98891..98964
location: region:98891-98964:1
so has part: feature:98891-98964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98891-98964:1:exon

OrsajCp081
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp081
so part of: sequence
location: 99016..99087
location: region:99016-99087:1
so has part: feature:99016-99087:1:exon
subclass of: SO_0000010

3131483
type: Gene
SIO_000068: ncbigene

position:99016:1
position: 99016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99087:1
position: 99087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99016-99087:1:exon

OrsajCp081
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp081
note: ORF23
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGIADVKLLNLGMLFPFVEVES
SIO_010081: OrsajCp081
subclass of: SO_0000673
so part of: OrsajCp081
location: 99016..99087
location: region:99016-99087:1
so has part: feature:99016-99087:1:exon

NP_039437.1
type: Protein
SIO_000068: ncbiprotein

Q37069
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:99016-99087:1:exon

OrsajCt152
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt152
so part of: sequence
location: complement(99216..99287)
location: region:99216-99287:-1
so has part: feature:99216-99287:-1:exon
subclass of: SO_0000663

3131371
type: Gene
SIO_000068: ncbigene

position:99216:-1
position: 99216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99287:-1
position: 99287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99216-99287:-1:exon

OrsajCt152
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt152
product: tRNA-Asn
note: trnN; tRNA-Asn(GUU)
SIO_010081: OrsajCt152
subclass of: SO_0000673
so part of: OrsajCt152
location: complement(99216..99287)
location: region:99216-99287:-1
so has part: feature:99216-99287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99216-99287:-1:exon

OrsajCp082
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp082
so part of: sequence
location: 100206..100397
location: region:100206-100397:1
so has part: feature:100206-100397:1:exon
subclass of: SO_0000010

3131484
type: Gene
SIO_000068: ncbigene

position:100206:1
position: 100206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100397:1
position: 100397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100206-100397:1:exon

OrsajCp082
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp082
note: ORF63
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFNSRTRNWKVTEGDPSFCNENYIKNSGQFRNQAKRLNTYAKKFIIGPPLIRRFNLYESLLV
SIO_010081: OrsajCp082
subclass of: SO_0000673
so part of: OrsajCp082
location: 100206..100397
location: region:100206-100397:1
so has part: feature:100206-100397:1:exon

NP_039438.1
type: Protein
SIO_000068: ncbiprotein

Q36945
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:100206-100397:1:exon

OrsajCp083
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rps15
locus tag: OrsajCp083
so part of: sequence
location: 100818..101090
location: region:100818-101090:1
so has part: feature:100818-101090:1:exon
subclass of: SO_0000010

3131437
type: Gene
SIO_000068: ncbigene

position:100818:1
position: 100818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101090:1
position: 101090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100818-101090:1:exon

OrsajCp083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rps15
locus tag: OrsajCp083
codon start: 1
transl table: 11
product: ribosomal protein S15
translation: MKKKGGRKIFGFMVKEEKEENWGSVEFQVFSFTNKIRRLASHLELHKKDFSSERGLRRLLGKRQRLLAYLAKKNRVRYKKLISQLDIRER
SIO_010081: OrsajCp083
subclass of: SO_0000673
so part of: OrsajCp083
location: 100818..101090
location: region:100818-101090:1
so has part: feature:100818-101090:1:exon

NP_039439.1
type: Protein
SIO_000068: ncbiprotein

P12150
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:100818-101090:1:exon

OrsajCp084
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp084
so part of: sequence
location: 101229..101399
location: region:101229-101399:1
so has part: feature:101229-101399:1:exon
subclass of: SO_0000010

3131485
type: Gene
SIO_000068: ncbigene

position:101229:1
position: 101229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101399:1
position: 101399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101229-101399:1:exon

OrsajCp084
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp084
note: ORF56; 5' portion of ORF393
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLPLTRKDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIGK
SIO_010081: OrsajCp084
subclass of: SO_0000673
so part of: OrsajCp084
location: 101229..101399
location: region:101229-101399:1
so has part: feature:101229-101399:1:exon

NP_039440.1
type: Protein
SIO_000068: ncbiprotein

Q32765
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:101229-101399:1:exon

OrsajCp084
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 39947
locus tag: OrsajCp084
note: [JSB]; Junction IR-SSC
SIO_010081: OrsajCp084
subclass of: SO_0000673
so part of: OrsajCp084
location: 101391..101392
location: region:101391-101392:1
so has part: feature:101391-101392:1:exon

position:101391:1
position: 101391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101392:1
position: 101392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101391-101392:1:exon

OrsajCp085
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
alternative label: ndh5
gene: ndhF
locus tag: OrsajCp085
gene synonym: ndh5
so part of: sequence
location: complement(101433..103637)
location: region:101433-103637:-1
so has part: feature:101433-103637:-1:exon
subclass of: SO_0000010

3131400
type: Gene
SIO_000068: ncbigene

position:101433:-1
position: 101433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103637:-1
position: 103637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101433-103637:-1:exon

OrsajCp085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
alternative label: ndh5
gene: ndhF
locus tag: OrsajCp085
gene synonym: ndh5
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 5
translation: MEHTYQYAWVIPLLPLPVIMSMGFGLFLVPTATKNLRRIWAFPSVLLLSIAMVFSVHLSIQQINGSSIYQYLWSWTVNNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWFTRPIAASACQKAFVTNRVGDFGLLLGILGFFWITGSLEFRDLFKIANNWIPNNEINSLLTILCAFLLFLGAVAKSAQFPLHVWLPDAMEGPTPISALIHATTMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFLGATLALAQRDIKRSLAYSTMSQLGYMMLALGIGSYQAALFHLITHAYSKALLFLGSGSVIHSMEPLVGYSPDKSQNMVLMGGLRKYIPITRTCFLWGTLSLCGIPPLACFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFDGYLRVHFQNYSSTKEDSLYSISLWGKRISKGVNRDFVLSTAKSGVSFFSQNLSKIHVNTGNRIGSFSTSLGTKNTFVYPHEPGNTMLFPLLILLLCTLFIGSIGIHFDNEIGELTILSKWLTPSINFFQESSNSSINSYEFITNAISSVSLAIFGLFIGIYVLWICLLFFSEFDLINSFVKGGPKKYFFHQLKKKIYSWSYNRGYIDIFYTRTFTLGIRGLTELTQFFDKGVIDGITNGVGLASFCIGEEIKYVGGGRISSYLFFFLCYVSVFLFFFLS
SIO_010081: OrsajCp085
subclass of: SO_0000673
so part of: OrsajCp085
location: complement(101433..103637)
location: region:101433-103637:-1
so has part: feature:101433-103637:-1:exon

NP_039441.1
type: Protein
SIO_000068: ncbiprotein

P12129
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:101433-103637:-1:exon

OrsajCp086
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rpl32
locus tag: OrsajCp086
so part of: sequence
location: 104352..104543
location: region:104352-104543:1
so has part: feature:104352-104543:1:exon
subclass of: SO_0000010

3131486
type: Gene
SIO_000068: ncbigene

position:104352:1
position: 104352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104543:1
position: 104543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104352-104543:1:exon

OrsajCp086
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rpl32
locus tag: OrsajCp086
note: ORF63
codon start: 1
transl table: 11
product: ribosomal protein L32
translation: MAVPKKRTSMSKKRIRKNLWKKKTYFSIVQSYSLAKSRSFSGVSEHPKPKGFSRQQTNNRVLG
SIO_010081: OrsajCp086
subclass of: SO_0000673
so part of: OrsajCp086
location: 104352..104543
location: region:104352-104543:1
so has part: feature:104352-104543:1:exon

NP_039442.1
type: Protein
SIO_000068: ncbiprotein

P12197
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:104352-104543:1:exon

OrsajCt153
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt153
so part of: sequence
location: 105074..105153
location: region:105074-105153:1
so has part: feature:105074-105153:1:exon
subclass of: SO_0000663

3131372
type: Gene
SIO_000068: ncbigene

position:105074:1
position: 105074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105153:1
position: 105153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105074-105153:1:exon

OrsajCt153
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt153
product: tRNA-Leu
note: trnL; tRNA-Leu(UAG)
SIO_010081: OrsajCt153
subclass of: SO_0000673
so part of: OrsajCt153
location: 105074..105153
location: region:105074-105153:1
so has part: feature:105074-105153:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:105074-105153:1:exon

OrsajCp087
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
alternative label: ycf5
gene: ccsA
locus tag: OrsajCp087
gene synonym: ycf5
so part of: sequence
location: 105236..106201
location: region:105236-106201:1
so has part: feature:105236-106201:1:exon
subclass of: SO_0000010

3131487
type: Gene
SIO_000068: ncbigene

position:105236:1
position: 105236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106201:1
position: 106201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105236-106201:1:exon

OrsajCp087
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
alternative label: ycf5
gene: ccsA
locus tag: OrsajCp087
gene synonym: ycf5
note: ORF321
codon start: 1
transl table: 11
product: cytochrome c biogenesis protein
translation: MLFATLEHILTHISFSTISIVITIHLITLLVRELGGLRDSSEKGMIATFFCITGFLVSRWASSGHFPLSNLYESLIFLSWALYILHMIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLMIRFRKNLDFFSKKKKNVLSKTFFFNEIEYFYAKRSALKSTFFPLFPNYYKYQLIERLDSWSYRVISLGFTLLTIGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTKSAFVASIGFLIIWICYFGINLLGIGLHSYGSFTLPI
SIO_010081: OrsajCp087
subclass of: SO_0000673
so part of: OrsajCp087
location: 105236..106201
location: region:105236-106201:1
so has part: feature:105236-106201:1:exon

NP_039443.1
type: Protein
SIO_000068: ncbiprotein

P12215
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:105236-106201:1:exon

OrsajCp088
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
alternative label: ndh4
gene: ndhD
locus tag: OrsajCp088
gene synonym: ndh4
so part of: sequence
location: complement(106398..107900)
location: region:106398-107900:-1
so has part: feature:106398-107900:-1:exon
subclass of: SO_0000010

3131398
type: Gene
SIO_000068: ncbigene

position:106398:-1
position: 106398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107900:-1
position: 107900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106398-107900:-1:exon

OrsajCp088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
alternative label: ndh4
gene: ndhD
locus tag: OrsajCp088
gene synonym: ndh4
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 4
translation: MSSFPWLTILVVLPIFAGSLIFFLPHRGNKIVRWYTMSICLLEFLLMTYAFCYHFQLEDPLIQLKEDSKWIDVFNFHWRLGIDGLSLGSILLTGFMTTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSATKFILYTAGGSIFFLIGVLGMGLYGSNEPRLDLERLINQSYPATLEILFYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAMQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTACDRMRLVYLEELGGASIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFLLMPKMLITFVMAIGMILTPIYLLSMLRQMFYGYKLFHVPNENFEDSGPRELFLLICIFLPVIGIGIYPDFVLSLSVDRVEALLSNYYPK
SIO_010081: OrsajCp088
subclass of: SO_0000673
so part of: OrsajCp088
location: complement(106398..107900)
location: region:106398-107900:-1
so has part: feature:106398-107900:-1:exon

NP_039444.1
type: Protein
SIO_000068: ncbiprotein

P12127
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:106398-107900:-1:exon

OrsajCp089
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: psaC
locus tag: OrsajCp089
so part of: sequence
location: complement(108020..108265)
location: region:108020-108265:-1
so has part: feature:108020-108265:-1:exon
subclass of: SO_0000010

3131408
type: Gene
SIO_000068: ncbigene

position:108020:-1
position: 108020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108265:-1
position: 108265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108020-108265:-1:exon

OrsajCp089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: psaC
locus tag: OrsajCp089
note: photosystem I iron-sulfur center; 9 kDa protein
codon start: 1
transl table: 11
product: photosystem I subunit VII
translation: MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLGPETTRSMALSY
SIO_010081: OrsajCp089
subclass of: SO_0000673
so part of: OrsajCp089
location: complement(108020..108265)
location: region:108020-108265:-1
so has part: feature:108020-108265:-1:exon

NP_039445.1
type: Protein
SIO_000068: ncbiprotein

P10794
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:108020-108265:-1:exon

OrsajCp090
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
alternative label: ndh4L
gene: ndhE
locus tag: OrsajCp090
gene synonym: ndh4L
so part of: sequence
location: complement(108712..109017)
location: region:108712-109017:-1
so has part: feature:108712-109017:-1:exon
subclass of: SO_0000010

3131399
type: Gene
SIO_000068: ncbigene

position:108712:-1
position: 108712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109017:-1
position: 109017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108712-109017:-1:exon

OrsajCp090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
alternative label: ndh4L
gene: ndhE
locus tag: OrsajCp090
gene synonym: ndh4L
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 4L
translation: MMFEHVLFLSVYLFSIGIYGLITSRNMVRALICLELILNSINLNLVTFSDLFDSRQLKGDIFAIFVIALAAAEAAIGLSILSSIHRNRKSTRINQSNFLNN
SIO_010081: OrsajCp090
subclass of: SO_0000673
so part of: OrsajCp090
location: complement(108712..109017)
location: region:108712-109017:-1
so has part: feature:108712-109017:-1:exon

NP_039446.1
type: Protein
SIO_000068: ncbiprotein

P12128
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:108712-109017:-1:exon

OrsajCp091
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: ndhG
locus tag: OrsajCp091
so part of: sequence
location: complement(109227..109757)
location: region:109227-109757:-1
so has part: feature:109227-109757:-1:exon
subclass of: SO_0000010

3131401
type: Gene
SIO_000068: ncbigene

position:109227:-1
position: 109227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109757:-1
position: 109757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109227-109757:-1:exon

OrsajCp091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: ndhG
locus tag: OrsajCp091
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 6
translation: MDLPGPIHEILVLFGGFVLLLGGLGVVLLTNPTFSAFSLGLVLVCISLFYILLNSYFVAVAQLLIYVGAINVLIIFAVMFVNGSEWSKDKNFWTIGDGFTSLVCITIPFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIHLATDFYLPFELISIILLVSLIGAITMARQ
SIO_010081: OrsajCp091
subclass of: SO_0000673
so part of: OrsajCp091
location: complement(109227..109757)
location: region:109227-109757:-1
so has part: feature:109227-109757:-1:exon

NP_039447.1
type: Protein
SIO_000068: ncbiprotein

P12130
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:109227-109757:-1:exon

OrsajCp092
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
alternative label: frxB
gene: ndhI
locus tag: OrsajCp092
gene synonym: frxB
so part of: sequence
location: complement(110000..110536)
location: region:110000-110536:-1
so has part: feature:110000-110536:-1:exon
subclass of: SO_0000010

3131488
type: Gene
SIO_000068: ncbigene

position:110000:-1
position: 110000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110536:-1
position: 110536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110000-110536:-1:exon

OrsajCp092
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
alternative label: frxB
gene: ndhI
locus tag: OrsajCp092
gene synonym: frxB
note: NADH dehydrogenase 18 kDa subunit; ORF178
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit I
translation: MFPMVTGFMGQQTIRAARYIGQSFIITLSHTNRLPITIHYPYEKSITSERFRGRIHFEFDKCIACEVCVRVCPIDLPLVDWRFEKDIKRKQLLNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELSTYDRHELNYNQIALSRLPISIMGDYTIQTIRNSTQSKIDEEKSWNSRTITDY
SIO_010081: OrsajCp092
subclass of: SO_0000673
so part of: OrsajCp092
location: complement(110000..110536)
location: region:110000-110536:-1
so has part: feature:110000-110536:-1:exon

NP_039448.1
type: Protein
SIO_000068: ncbiprotein

P12099
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:110000-110536:-1:exon

OrsajCp093
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
alternative label: ndh1
gene: ndhA
locus tag: OrsajCp093
gene synonym: ndh1
so part of: sequence
location: complement(110631..112706)
location: region:110631-112706:-1
so has part: feature:110631-112706:-1:exon
subclass of: SO_0000010

3131395
type: Gene
SIO_000068: ncbigene

position:110631:-1
position: 110631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112706:-1
position: 112706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110631-112706:-1:exon

OrsajCp093
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
alternative label: ndh1
gene: ndhA
locus tag: OrsajCp093
gene synonym: ndh1
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 1
translation: MIIDRVQVEAINSFSNLELLKEVYGLIWILPILTLLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLFKEDILPSRGDIPLFSIGPSIAVISILLSFLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLSNSSSTVDIVEAQSKYGFFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNLSIPYISFFGFFQMNKMVGILEMTMSIFITLTKAYLFLFISITIRWTLPRMRMDQLLNLGWKFLLPISLGNLLLTTSSQLVSL
SIO_010081: OrsajCp093
subclass of: SO_0000673
so part of: OrsajCp093
location: complement(join(110631..111169,112157..112706))
location: region:110631-112706:-1
so has part: feature:112157-112706:-1:exon
so has part: feature:110631-111169:-1:exon

NP_039449.1
type: Protein
SIO_000068: ncbiprotein

P12124
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:112157-112706:-1:exon

position:112157:-1
position: 112157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:110631-111169:-1:exon

position:111169:-1
position: 111169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OrsajCp093
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
alternative label: ndh1
gene: ndhA
locus tag: OrsajCp093
gene synonym: ndh1
number: 2
SIO_010081: OrsajCp093
subclass of: SO_0000673
so part of: OrsajCp093
location: complement(110631..111169)
location: region:110631-111169:-1
so has part: feature:110631-111169:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110631-111169:-1:exon

OrsajCp093
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
alternative label: ndh1
gene: ndhA
locus tag: OrsajCp093
gene synonym: ndh1
number: 1
SIO_010081: OrsajCp093
subclass of: SO_0000673
so part of: OrsajCp093
location: complement(112157..112706)
location: region:112157-112706:-1
so has part: feature:112157-112706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:112157-112706:-1:exon

OrsajCp094
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: ndhH
locus tag: OrsajCp094
so part of: sequence
location: complement(112708..113889)
location: region:112708-113889:-1
so has part: feature:112708-113889:-1:exon
subclass of: SO_0000010

3131489
type: Gene
SIO_000068: ncbigene

position:112708:-1
position: 112708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113889:-1
position: 113889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112708-113889:-1:exon

OrsajCp094
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: ndhH
locus tag: OrsajCp094
note: NADH dehydrogenase 49 kDa subunit; ORF393 (ndhH)
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 7
translation: MSLPLTRKDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLRGVIEYQQLITQNPIFLERVEGVGFISGEEAVNWGLSGPMLRASGIQWDLRKVDLYESYNQFDWKVQWQKEGDSLARYLVRIGEMRESIKIIQQAVEKIPGGPYENLEVRRFKKAKNSEWNDFEYRFLGKKPSPNFELSKQELYARVEAPKGELGIYLVGDDSLFPWRWKIRPPGFINLQILPQLVKKMKLADIMTILGSIDIIMGEVDR
SIO_010081: OrsajCp094
subclass of: SO_0000673
so part of: OrsajCp094
location: complement(112708..113889)
location: region:112708-113889:-1
so has part: feature:112708-113889:-1:exon

NP_039450.1
type: Protein
SIO_000068: ncbiprotein

P12132
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:112708-113889:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 39947
note: [JSA]; Junction SSC-IR
so part of: sequence
location: 113726..113727
location: region:113726-113727:1
so has part: feature:113726-113727:1:region

position:113726:1
position: 113726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113727:1
position: 113727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113726-113727:1:region

OrsajCp095
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rps15
locus tag: OrsajCp095
so part of: sequence
location: complement(114028..114300)
location: region:114028-114300:-1
so has part: feature:114028-114300:-1:exon
subclass of: SO_0000010

3131438
type: Gene
SIO_000068: ncbigene

position:114028:-1
position: 114028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114300:-1
position: 114300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114028-114300:-1:exon

OrsajCp095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rps15
locus tag: OrsajCp095
codon start: 1
transl table: 11
product: ribosomal protein S15
translation: MKKKGGRKIFGFMVKEEKEENWGSVEFQVFSFTNKIRRLASHLELHKKDFSSERGLRRLLGKRQRLLAYLAKKNRVRYKKLISQLDIRER
SIO_010081: OrsajCp095
subclass of: SO_0000673
so part of: OrsajCp095
location: complement(114028..114300)
location: region:114028-114300:-1
so has part: feature:114028-114300:-1:exon

NP_039451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114028-114300:-1:exon

OrsajCp096
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp096
so part of: sequence
location: complement(114721..114912)
location: region:114721-114912:-1
so has part: feature:114721-114912:-1:exon
subclass of: SO_0000010

3131490
type: Gene
SIO_000068: ncbigene

position:114721:-1
position: 114721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114912:-1
position: 114912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114721-114912:-1:exon

OrsajCp096
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp096
note: ORF63
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFNSRTRNWKVTEGDPSFCNENYIKNSGQFRNQAKRLNTYAKKFIIGPPLIRRFNLYESLLV
SIO_010081: OrsajCp096
subclass of: SO_0000673
so part of: OrsajCp096
location: complement(114721..114912)
location: region:114721-114912:-1
so has part: feature:114721-114912:-1:exon

NP_039452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114721-114912:-1:exon

OrsajCt154
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt154
so part of: sequence
location: 115831..115902
location: region:115831-115902:1
so has part: feature:115831-115902:1:exon
subclass of: SO_0000663

3131373
type: Gene
SIO_000068: ncbigene

position:115831:1
position: 115831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115902:1
position: 115902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115831-115902:1:exon

OrsajCt154
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt154
product: tRNA-Asn
note: trnN; tRNA-Asn(GUU)
SIO_010081: OrsajCt154
subclass of: SO_0000673
so part of: OrsajCt154
location: 115831..115902
location: region:115831-115902:1
so has part: feature:115831-115902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115831-115902:1:exon

OrsajCp097
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp097
so part of: sequence
location: complement(116031..116102)
location: region:116031-116102:-1
so has part: feature:116031-116102:-1:exon
subclass of: SO_0000010

3131491
type: Gene
SIO_000068: ncbigene

position:116031:-1
position: 116031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116102:-1
position: 116102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116031-116102:-1:exon

OrsajCp097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp097
note: ORF23
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGIADVKLLNLGMLFPFVEVES
SIO_010081: OrsajCp097
subclass of: SO_0000673
so part of: OrsajCp097
location: complement(116031..116102)
location: region:116031-116102:-1
so has part: feature:116031-116102:-1:exon

NP_039453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116031-116102:-1:exon

OrsajCt155
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt155
so part of: sequence
location: complement(116154..116227)
location: region:116154-116227:-1
so has part: feature:116154-116227:-1:exon
subclass of: SO_0000663

3131374
type: Gene
SIO_000068: ncbigene

position:116154:-1
position: 116154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116227:-1
position: 116227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116154-116227:-1:exon

OrsajCt155
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt155
product: tRNA-Arg
note: trnR; tRNA-Arg(ACG)
SIO_010081: OrsajCt155
subclass of: SO_0000673
so part of: OrsajCt155
location: complement(116154..116227)
location: region:116154-116227:-1
so has part: feature:116154-116227:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116154-116227:-1:exon

OrsajCr117
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCr117
so part of: sequence
location: complement(116484..116604)
location: region:116484-116604:-1
so has part: feature:116484-116604:-1:exon
subclass of: SO_0000573

3131375
type: Gene
SIO_000068: ncbigene

position:116484:-1
position: 116484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116604:-1
position: 116604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116484-116604:-1:exon

OrsajCr117
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 39947
locus tag: OrsajCr117
product: 5S ribosomal RNA
SIO_010081: OrsajCr117
subclass of: SO_0000673
so part of: OrsajCr117
location: complement(116484..116604)
location: region:116484-116604:-1
so has part: feature:116484-116604:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116484-116604:-1:exon

OrsajCr118
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCr118
so part of: sequence
location: complement(116832..116926)
location: region:116832-116926:-1
so has part: feature:116832-116926:-1:exon
subclass of: SO_0000573

3131376
type: Gene
SIO_000068: ncbigene

position:116832:-1
position: 116832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116926:-1
position: 116926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116832-116926:-1:exon

OrsajCr118
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 39947
locus tag: OrsajCr118
product: 4.5S ribosomal RNA
SIO_010081: OrsajCr118
subclass of: SO_0000673
so part of: OrsajCr118
location: complement(116832..116926)
location: region:116832-116926:-1
so has part: feature:116832-116926:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116832-116926:-1:exon

OrsajCr119
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCr119
so part of: sequence
location: complement(117022..119905)
location: region:117022-119905:-1
so has part: feature:117022-119905:-1:exon
subclass of: SO_0000573

3131377
type: Gene
SIO_000068: ncbigene

position:117022:-1
position: 117022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119905:-1
position: 119905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117022-119905:-1:exon

OrsajCr119
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 39947
locus tag: OrsajCr119
product: 23S ribosomal RNA
SIO_010081: OrsajCr119
subclass of: SO_0000673
so part of: OrsajCr119
location: complement(117022..119905)
location: region:117022-119905:-1
so has part: feature:117022-119905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117022-119905:-1:exon

OrsajCt156
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt156
so part of: sequence
location: complement(120051..120935)
location: region:120051-120935:-1
so has part: feature:120051-120935:-1:exon
subclass of: SO_0000663

3131378
type: Gene
SIO_000068: ncbigene

position:120051:-1
position: 120051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120935:-1
position: 120935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120051-120935:-1:exon

OrsajCt156
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt156
product: tRNA-Ala
SIO_010081: OrsajCt156
subclass of: SO_0000673
so part of: OrsajCt156
location: complement(join(120051..120085,120898..120935))
location: region:120051-120935:-1
so has part: feature:120898-120935:-1:exon
so has part: feature:120051-120085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120898-120935:-1:exon

position:120898:-1
position: 120898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:120051-120085:-1:exon

position:120085:-1
position: 120085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OrsajCp098
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: ORF109
locus tag: OrsajCp098
note: ORF within trnA intron
pseudo: true
so part of: sequence
location: complement(120106..120435)
location: region:120106-120435:-1
so has part: feature:120106-120435:-1:exon

3131387
type: Gene
SIO_000068: ncbigene

position:120106:-1
position: 120106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120435:-1
position: 120435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120106-120435:-1:exon

OrsajCt157
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt157
so part of: sequence
location: complement(121000..122018)
location: region:121000-122018:-1
so has part: feature:121000-122018:-1:exon
subclass of: SO_0000663

3131379
type: Gene
SIO_000068: ncbigene

position:121000:-1
position: 121000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122018:-1
position: 122018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121000-122018:-1:exon

OrsajCt157
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt157
product: tRNA-Ile
note: trnI; tRNA-Ile(GAU)
SIO_010081: OrsajCt157
subclass of: SO_0000673
so part of: OrsajCt157
location: complement(join(121000..121034,121982..122018))
location: region:121000-122018:-1
so has part: feature:121982-122018:-1:exon
so has part: feature:121000-121034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121982-122018:-1:exon

position:121982:-1
position: 121982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:121000-121034:-1:exon

position:121034:-1
position: 121034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OrsajCp099
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp099
so part of: sequence
location: complement(121476..121877)
location: region:121476-121877:-1
so has part: feature:121476-121877:-1:exon
subclass of: SO_0000010

3131492
type: Gene
SIO_000068: ncbigene

position:121476:-1
position: 121476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121877:-1
position: 121877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121476-121877:-1:exon

OrsajCp099
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp099
note: ORF133; ORF within trnI intron
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAYSSCLNRSLKPNKLLLRRIDGAIQVRSHVDLTFYSLVGSGRSGGGTTAPLFSRIHTSLISVWRAISRAQVEVRPQWENGAPNNASSQTKNYEITLSFWGDGGIVPFEPFFHAFPGGLEKAAINRTSLILPS
SIO_010081: OrsajCp099
subclass of: SO_0000673
so part of: OrsajCp099
location: complement(121476..121877)
location: region:121476-121877:-1
so has part: feature:121476-121877:-1:exon

NP_039454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121476-121877:-1:exon

OrsajCr120
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCr120
so part of: sequence
location: complement(122329..123819)
location: region:122329-123819:-1
so has part: feature:122329-123819:-1:exon
subclass of: SO_0000573

3131380
type: Gene
SIO_000068: ncbigene

position:122329:-1
position: 122329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123819:-1
position: 123819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122329-123819:-1:exon

OrsajCr120
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 39947
locus tag: OrsajCr120
product: 16S ribosomal RNA
SIO_010081: OrsajCr120
subclass of: SO_0000673
so part of: OrsajCr120
location: complement(122329..123819)
location: region:122329-123819:-1
so has part: feature:122329-123819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122329-123819:-1:exon

OrsajCt158
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt158
so part of: sequence
location: complement(124051..124122)
location: region:124051-124122:-1
so has part: feature:124051-124122:-1:exon
subclass of: SO_0000663

3131381
type: Gene
SIO_000068: ncbigene

position:124051:-1
position: 124051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124122:-1
position: 124122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124051-124122:-1:exon

OrsajCt158
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt158
product: tRNA-Val
note: trnV; tRNA-Val(GAC)
SIO_010081: OrsajCt158
subclass of: SO_0000673
so part of: OrsajCt158
location: complement(124051..124122)
location: region:124051-124122:-1
so has part: feature:124051-124122:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124051-124122:-1:exon

OrsajCp100
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp100
so part of: sequence
location: 124360..124617
location: region:124360-124617:1
so has part: feature:124360-124617:1:exon
subclass of: SO_0000010

3131493
type: Gene
SIO_000068: ncbigene

position:124360:1
position: 124360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124617:1
position: 124617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124360-124617:1:exon

OrsajCp100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp100
note: ORF85
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKILFSMFYSILVGEEPDSVFLKKEGKQNQVKMIWVAPSSCAKDLTISEGTGATFLFNFHSRVSYLFPRPFLRPRNMKWTNSFS
SIO_010081: OrsajCp100
subclass of: SO_0000673
so part of: OrsajCp100
location: 124360..124617
location: region:124360-124617:1
so has part: feature:124360-124617:1:exon

NP_039455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124360-124617:1:exon

OrsajCp101
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp101
so part of: sequence
location: 124676..124891
location: region:124676-124891:1
so has part: feature:124676-124891:1:exon
subclass of: SO_0000010

3131494
type: Gene
SIO_000068: ncbigene

position:124676:1
position: 124676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124891:1
position: 124891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124676-124891:1:exon

OrsajCp101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp101
note: ORF72
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNFIVIEIHVLPRQNFELAILLPNRQRLTSVERMIHSDRYEDPTTLHCRIHVPYLKRVDLCASLMVQSSSC
SIO_010081: OrsajCp101
subclass of: SO_0000673
so part of: OrsajCp101
location: 124676..124891
location: region:124676-124891:1
so has part: feature:124676-124891:1:exon

NP_039456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124676-124891:1:exon

OrsajCp102
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: rps12
locus tag: OrsajCp102
number: 2
SIO_010081: OrsajCp102
subclass of: SO_0000673
so part of: OrsajCp102
location: 125845..126076
location: region:125845-126076:1
so has part: feature:125845-126076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125845-126076:1:exon

OrsajCp102
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: rps12
locus tag: OrsajCp102
number: 3
SIO_010081: OrsajCp102
subclass of: SO_0000673
so part of: OrsajCp102
location: 126617..126645
location: region:126617-126645:1
so has part: feature:126617-126645:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126617-126645:1:exon

OrsajCp103
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rps7
locus tag: OrsajCp103
so part of: sequence
location: 126704..127174
location: region:126704-127174:1
so has part: feature:126704-127174:1:exon
subclass of: SO_0000010

3131444
type: Gene
SIO_000068: ncbigene

position:126704:1
position: 126704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127174:1
position: 127174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126704-127174:1:exon

OrsajCp103
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rps7
locus tag: OrsajCp103
note: 30S ribosomal protein S7
codon start: 1
transl table: 11
product: ribosomal protein S7
translation: MSRRGTAEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAIRRVTPNIGVKTRRNKKGSTRKVPIEIGSKQGRALAIRWLLEASQKRPGRNMAFKLSSELVDAAKGGGGAIRKKEATHRMAEANRALAHFR
SIO_010081: OrsajCp103
subclass of: SO_0000673
so part of: OrsajCp103
location: 126704..127174
location: region:126704-127174:1
so has part: feature:126704-127174:1:exon

NP_039458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126704-127174:1:exon

OrsajCp104
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
alternative label: ndh2
gene: ndhB
locus tag: OrsajCp104
gene synonym: ndh2
so part of: sequence
location: 127479..129723
location: region:127479-129723:1
so has part: feature:127479-129723:1:exon
subclass of: SO_0000010

3131396
type: Gene
SIO_000068: ncbigene

position:127479:1
position: 127479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129723:1
position: 129723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127479-129723:1:exon

OrsajCp104
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
alternative label: ndh2
gene: ndhB
locus tag: OrsajCp104
gene synonym: ndh2
codon start: 1
transl table: 11
product: NADH dehydrogenase subunit 2
translation: MIWHVQNENFILDSTRIFMKAFHLLLFQGSFIFPECILIFGLILLLMIDLTSDQKDRPWFYFISSTSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALISITVGLGFKLSPAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRILDIPFYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIVKLLMTGRNQEITPYVRNYRRSPLRSNNSIELSMTVCVIASTIPGISMNPILAIAQDTLF
SIO_010081: OrsajCp104
subclass of: SO_0000673
so part of: OrsajCp104
location: join(127479..128255,128968..129723)
location: region:127479-129723:1
so has part: feature:127479-128255:1:exon
so has part: feature:128968-129723:1:exon

NP_039459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127479-128255:1:exon

position:128255:1
position: 128255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:128968-129723:1:exon

position:128968:1
position: 128968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OrsajCp104
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
alternative label: ndh2
gene: ndhB
locus tag: OrsajCp104
gene synonym: ndh2
number: 1
SIO_010081: OrsajCp104
subclass of: SO_0000673
so part of: OrsajCp104
location: 127479..128255
location: region:127479-128255:1
so has part: feature:127479-128255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127479-128255:1:exon

OrsajCp104
type: Intron
subclass of: SO_0000188
RO_0002162: 39947
alternative label: ndh2
gene: ndhB
locus tag: OrsajCp104
gene synonym: ndh2
number: 1
SIO_010081: OrsajCp104
subclass of: SO_0000673
so part of: OrsajCp104
location: 128256..128967
location: region:128256-128967:1
so has part: feature:128256-128967:1:exon

position:128256:1
position: 128256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128967:1
position: 128967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128256-128967:1:exon

OrsajCp104
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
alternative label: ndh2
gene: ndhB
locus tag: OrsajCp104
gene synonym: ndh2
number: 2
SIO_010081: OrsajCp104
subclass of: SO_0000673
so part of: OrsajCp104
location: 128968..129723
location: region:128968-129723:1
so has part: feature:128968-129723:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128968-129723:1:exon

OrsajCt159
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt159
so part of: sequence
location: 130327..130407
location: region:130327-130407:1
so has part: feature:130327-130407:1:exon
subclass of: SO_0000663

3131382
type: Gene
SIO_000068: ncbigene

position:130327:1
position: 130327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130407:1
position: 130407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130327-130407:1:exon

OrsajCt159
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt159
product: tRNA-Leu
note: trnL; tRNA-Leu(CAA)
SIO_010081: OrsajCt159
subclass of: SO_0000673
so part of: OrsajCt159
location: 130327..130407
location: region:130327-130407:1
so has part: feature:130327-130407:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:130327-130407:1:exon

OrsajCp105
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp105
so part of: sequence
location: complement(130372..131121)
location: region:130372-131121:-1
so has part: feature:130372-131121:-1:exon
subclass of: SO_0000010

3131495
type: Gene
SIO_000068: ncbigene

position:130372:-1
position: 130372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131121:-1
position: 131121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130372-131121:-1:exon

OrsajCp105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp105
note: ORF249
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKDETLLVFTLVVSSVSVFLFGILLFMVLISATRDFRERTKSKLVKIMIWAGIVVITFAIAVRIYPIFIFLLKERIKPLVEALYDKLPWIWEVSLSRYWDRLIDFLDRYLWACAQRIQTGIRKQKGEFVVTFSCRVKKRLYARAIEVGIHLSLLSNLFWILKTTLAVGYRLLWVLYYIISFEGFLGSFRLYLVYFGFYCLLFSGKWLRTSEDRGERQAEISGILLRGMLIECAFSVLCLEEDSNLHAL
SIO_010081: OrsajCp105
subclass of: SO_0000673
so part of: OrsajCp105
location: complement(130372..131121)
location: region:130372-131121:-1
so has part: feature:130372-131121:-1:exon

NP_039460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130372-131121:-1:exon

OrsajCp107
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp107
so part of: sequence
location: complement(131498..131584)
location: region:131498-131584:-1
so has part: feature:131498-131584:-1:exon
subclass of: SO_0000010

3131496
type: Gene
SIO_000068: ncbigene

position:131498:-1
position: 131498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131584:-1
position: 131584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131498-131584:-1:exon

OrsajCp107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp107
note: ORF28
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNYEFNRSSLAERRIFLAHHLFPNLVWG
SIO_010081: OrsajCp107
subclass of: SO_0000673
so part of: OrsajCp107
location: complement(131498..131584)
location: region:131498-131584:-1
so has part: feature:131498-131584:-1:exon

NP_039461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131498-131584:-1:exon

OrsajCt160
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt160
so part of: sequence
location: 131906..131979
location: region:131906-131979:1
so has part: feature:131906-131979:1:exon
subclass of: SO_0000663

3131383
type: Gene
SIO_000068: ncbigene

position:131906:1
position: 131906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131979:1
position: 131979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131906-131979:1:exon

OrsajCt160
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt160
product: tRNA-Ile
note: trnI; tRNA-Ile(CAU)
SIO_010081: OrsajCt160
subclass of: SO_0000673
so part of: OrsajCt160
location: 131906..131979
location: region:131906-131979:1
so has part: feature:131906-131979:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131906-131979:1:exon

OrsajCp108
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rpl23
locus tag: OrsajCp108
so part of: sequence
location: 132154..132435
location: region:132154-132435:1
so has part: feature:132154-132435:1:exon
subclass of: SO_0000010

3131427
type: Gene
SIO_000068: ncbigene

position:132154:1
position: 132154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132435:1
position: 132435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132154-132435:1:exon

OrsajCp108
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rpl23
locus tag: OrsajCp108
note: 50S ribosomal protein L23
codon start: 1
transl table: 11
product: ribosomal protein L23
translation: MDGIKYAVFTEKSLRLLGKNQYTFNVESGFTKTEIKHWVELFFGVKVVAVNSHRLPGKGRRMGPILGHTMHYRRMIITLQPGYSIPLLDREKN
SIO_010081: OrsajCp108
subclass of: SO_0000673
so part of: OrsajCp108
location: 132154..132435
location: region:132154-132435:1
so has part: feature:132154-132435:1:exon

NP_039462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132154-132435:1:exon

OrsajCp109
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rpl2
locus tag: OrsajCp109
so part of: sequence
location: 132454..133938
location: region:132454-133938:1
so has part: feature:132454-133938:1:exon
subclass of: SO_0000010

3131424
type: Gene
SIO_000068: ncbigene

position:132454:1
position: 132454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133938:1
position: 133938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132454-133938:1:exon

OrsajCp109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rpl2
locus tag: OrsajCp109
note: 50S ribosomal protein L2; acg start
codon start: 1
transl except: (pos:132454..132456,aa:Met)
transl table: 11
product: ribosomal protein L2
translation: MAKHLYKTPIPSTRKGTIDRQVKSNPRNNLIHGRHRCGKGRNSRGIITARHRGGGHKRLYRKIDFRRNQKDISGRIVTIEYDPNRNAYICLIHYGDGEKGYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAIHNIEITRGRGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRRTRKRKKYSDSFILRRRK
SIO_010081: OrsajCp109
subclass of: SO_0000673
so part of: OrsajCp109
location: join(132454..132844,133508..133938)
location: region:132454-133938:1
so has part: feature:132454-132844:1:exon
so has part: feature:133508-133938:1:exon

NP_039463.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132454-132844:1:exon

position:132844:1
position: 132844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133508-133938:1:exon

position:133508:1
position: 133508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OrsajCp109
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: rpl2
locus tag: OrsajCp109
number: 1
SIO_010081: OrsajCp109
subclass of: SO_0000673
so part of: OrsajCp109
location: 132454..132844
location: region:132454-132844:1
so has part: feature:132454-132844:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132454-132844:1:exon

OrsajCp110
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp110
so part of: sequence
location: complement(133419..133832)
location: region:133419-133832:-1
so has part: feature:133419-133832:-1:exon
subclass of: SO_0000010

3131497
type: Gene
SIO_000068: ncbigene

position:133419:-1
position: 133419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133832:-1
position: 133832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133419-133832:-1:exon

OrsajCp110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp110
note: ORF137
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSFLSKNPFPNCTSFFQSIRLSRCI
SIO_010081: OrsajCp110
subclass of: SO_0000673
so part of: OrsajCp110
location: complement(133419..133832)
location: region:133419-133832:-1
so has part: feature:133419-133832:-1:exon

NP_039464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133419-133832:-1:exon

OrsajCp109
type: Exon
subclass of: SO_0000147
RO_0002162: 39947
gene: rpl2
locus tag: OrsajCp109
number: 2
SIO_010081: OrsajCp109
subclass of: SO_0000673
so part of: OrsajCp109
location: 133508..133938
location: region:133508-133938:1
so has part: feature:133508-133938:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133508-133938:1:exon

OrsajCp111
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCp111
so part of: sequence
location: 133955..134203
location: region:133955-134203:1
so has part: feature:133955-134203:1:exon
subclass of: SO_0000010

3131498
type: Gene
SIO_000068: ncbigene

position:133955:1
position: 133955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134203:1
position: 134203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133955-134203:1:exon

OrsajCp111
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
locus tag: OrsajCp111
note: ORF82
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENCIFGICNNGMGERRELNPRMVDSQSTALIHLATSAPYPAKGFSLFSIHHYSIYSDLHTSIEILDIECHSLKWKKRSNQL
SIO_010081: OrsajCp111
subclass of: SO_0000673
so part of: OrsajCp111
location: 133955..134203
location: region:133955-134203:1
so has part: feature:133955-134203:1:exon

NP_039465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133955-134203:1:exon

OrsajCt161
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
locus tag: OrsajCt161
so part of: sequence
location: complement(133991..134068)
location: region:133991-134068:-1
so has part: feature:133991-134068:-1:exon
subclass of: SO_0000663

3131384
type: Gene
SIO_000068: ncbigene

position:133991:-1
position: 133991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134068:-1
position: 134068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133991-134068:-1:exon

OrsajCt161
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39947
locus tag: OrsajCt161
product: tRNA-His
note: trnH; tRNA-His(GUG)
SIO_010081: OrsajCt161
subclass of: SO_0000673
so part of: OrsajCt161
location: complement(133991..134068)
location: region:133991-134068:-1
so has part: feature:133991-134068:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133991-134068:-1:exon

OrsajCp112
type: Gene
subclass of: SO_0000704
RO_0002162: 39947
gene: rps19
locus tag: OrsajCp112
so part of: sequence
location: 134200..134481
location: region:134200-134481:1
so has part: feature:134200-134481:1:exon
subclass of: SO_0000010

3131441
type: Gene
SIO_000068: ncbigene

position:134200:1
position: 134200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134481:1
position: 134481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134200-134481:1:exon

OrsajCp112
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39947
gene: rps19
locus tag: OrsajCp112
note: 30S ribosomal protein S19
codon start: 1
transl table: 11
product: ribosomal protein S19
translation: MTRKKTNPFVAHHLLAKIEKVNMKEEKETIVTWSRASSILPAMVGHTIAIHNGKEHIPIYITNPMVGRKLGEFVPTRHFTSYESARKDTKSRR
SIO_010081: OrsajCp112
subclass of: SO_0000673
so part of: OrsajCp112
location: 134200..134481
location: region:134200-134481:1
so has part: feature:134200-134481:1:exon

NP_039466.2
type: Protein
SIO_000068: ncbiprotein

P12153
type: UniProt
SIO_000068: uniprot

urn:…
SIO_000300: 1
SIO_000628: feature:134200-134481:1:exon