Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI05, complete sequence.
type: Entry
definition: Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI05, complete sequence.
sequence version: NC_009959.1
sequence date: 2023-05-02
sequence: sequence
division: CON
label: NC_009959.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02598387
keyword: RefSeq
source: Dinoroseobacter shibae DFL 12 = DSM 16493
organism: Dinoroseobacter shibae DFL 12 = DSM 16493
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Dinoroseobacter.
reference: 1
reference: 2
reference: 3
reference: 4
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP000835.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4002768\nSource DNA and bacteria available from Irene Wagner-Dobler\n(Irene.Wagner-Doebler@helmholtz-hzi.de)\nContacts: Irene Wagner-Dobler\n(Irene.Wagner-Doebler@helmholtz-hzi.de)\n Paul Richardson (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/02/2023 02:01:02\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,328\nCDSs (total) :: 4,274\nGenes (coding) :: 4,219\nCDSs (with protein) :: 4,219\nGenes (RNA) :: 54\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 44\nncRNAs :: 4\nPseudo Genes (total) :: 55\nCDSs (without protein) :: 55\nPseudo Genes (ambiguous residues) :: 0 of 55\nPseudo Genes (frameshifted) :: 20 of 55…

sequence
subclass of: SO_0000155
sequence length: 72296
topology: circular
so has quality: SO_0000988
location: 1..72296
location: region:1-72296:1
RO_0002162: 398580

NC_009959
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02598387
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of chromosome of Dinoroseobacter shibae DFL 12
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Thompson, L.S.
author: Brettin, T.
author: Bruce, D.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Kim, E.
author: Richardson, P.
journal: Unpublished

2
title: The Roseobacter - microalgae symbiosis: Adaptation to viral pressure, horizontal gene transfer, and ability to synthesize vitamine B12 under all conditions are revealed by the genome sequence
author: Liesegang, H.
author: Wagner-Doebler, I.
journal: Unpublished

3
title: Direct Submission
author: Liesegang, H.
author: Wagner-Doebler, I.
journal: Submitted (06-JUL-2009) HZI-Braunschweig, Braunschweig, Germany
comments: Protein update by submitter

4
title: Direct Submission
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Thompson, L.S.
author: Brettin, T.
author: Bruce, D.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Kim, E.
author: Richardson, P.
journal: Submitted (21-SEP-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72296:1
position: 72296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-72296:1:source
so part of: sequence
organism: Dinoroseobacter shibae DFL 12 = DSM 16493
mol type: genomic DNA
strain: DFL 12
type material: type strain of Dinoroseobacter shibae
plasmid: pDSHI05

398580
type: Taxonomy
SIO_000068: taxonomy

DSHI_RS20845
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20845
old locus tag: Dshi_4154
so part of: sequence
location: complement(24..977)
location: region:24-977:-1
so has part: feature:24-977:-1:exon
subclass of: SO_0000010

position:24:-1
position: 24
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977:-1
position: 977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24-977:-1:exon

DSHI_RS20845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20845
old locus tag: Dshi_4154
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010394426.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: quinoprotein relay system zinc metallohydrolase 1
translation: MADLRFSRRASLGLLASAALIRPARAAARLSYDLRPQAVAKGVWMIEGSTEYFTMENGGAIVNCALLQGDTGLIVVDTGSSLRYGEALKSVADGLDLRGVSTVINTHHHPDHFFGNQVFADRPILALGETILQADAQADALADNMYRILGDWMRGTDPVIPRNVISGGDVVIDGRAFLALPLSGHTEGDLALLDRESGILIAGDLVFYDRAATTPSADLPVWHAALDTLEGTGAAAVLPGHGPIDRSGAAIPQTRAYLRWLEDTLRTAAGQGLDMIEVMDLPLPPEFAGLGAEPEEFHRSIAHLYPSIEREVMPRAN
SIO_010081: DSHI_RS20845
subclass of: SO_0000673
so part of: DSHI_RS20845
location: complement(24..977)
location: region:24-977:-1
so has part: feature:24-977:-1:exon

WP_012187431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24-977:-1:exon

DSHI_RS20850
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20850
old locus tag: Dshi_4155
so part of: sequence
location: complement(977..1759)
location: region:977-1759:-1
so has part: feature:977-1759:-1:exon
subclass of: SO_0000010

position:1759:-1
position: 1759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977-1759:-1:exon

DSHI_RS20850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20850
old locus tag: Dshi_4155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011047261.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: quinoprotein dehydrogenase-associated SoxYZ-like carrier
translation: MTRTALVALTVSGLAAPAALADVQTPLQDPMNSGMWEYHQQNLLGDPADIRFDDRVIVRGPGEAEDTVNVPLLVDASALDNVDKIVISADYGPIPHIMTYYPGQAEAKIALRFKIDQGTAIRASVRTHDGAWHIGSTYIDAAGGGCSAPAAAYANADWYDRLGEIHGQVWPASGRARMVVDHPMDTGLAGDIPVFIIEDLYLRDDAGTELARLELFEPVNEDPAFTVYFDPEIMPASLHVDGRDNNGNEIEGLLQAADTH
SIO_010081: DSHI_RS20850
subclass of: SO_0000673
so part of: DSHI_RS20850
location: complement(977..1759)
location: region:977-1759:-1
so has part: feature:977-1759:-1:exon

WP_012187432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:977-1759:-1:exon

DSHI_RS20855
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20855
old locus tag: Dshi_4156
so part of: sequence
location: 1936..3684
location: region:1936-3684:1
so has part: feature:1936-3684:1:exon
subclass of: SO_0000010

position:1936:1
position: 1936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3684:1
position: 3684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1936-3684:1:exon

DSHI_RS20855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20855
old locus tag: Dshi_4156
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013960689.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-54-dependent Fis family transcriptional regulator
translation: MGDLAHVTEIDRVVSGRAQGSLRDAVVTESWRRCVESYGLNPTATDAPHIVTDAELRAHREQAERLIAVARSGLQGLFKQVAGHNYVLLLADAQGVCVDFFGDPRFEDELRSAGLYLGSNWQEELAGTCGVGSCIVTGEAVTIHQDDHFGLAHTPLSCTAAPIYDSLGQLSAVLDISLLRSPTPKSSQNLAMSLVKASARRVEMANLMATARQDWVLRFSTSPEFLEVDPEAAVSLDGAGRITGLTHAAQAALGATDPGALLGTRIDALMEMSIDDLPDLMRGRPTEERVLRLRDGRGVFGHAIAPQAPRTPRPAAVPEMPAPLAGFAGPDPVLTPLLRRLGQLAGTEVPLLLLGETGTGKERLARAVHLSGPAGRGFTVLRCAGLGRDPLPEPPAGTLFLRGVEDLDTAGQGAVLALLEARPDLRAIASARTDISAAVKAGAFRSDLFFRLAGHVAHLPPLRLRHDLEWLLTRLMRRHVARDLSLSPAARAELSARNWPGNIRELQSTLDVAAALAEGRVIDLPDLPGPSLPEAAAAPPEADLQSLLDACGWNMSQAARRLGVNRSTVLRRVRKAGLTPPS
SIO_010081: DSHI_RS20855
subclass of: SO_0000673
so part of: DSHI_RS20855
location: 1936..3684
location: region:1936-3684:1
so has part: feature:1936-3684:1:exon

WP_012187433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1936-3684:1:exon

DSHI_RS20860
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20860
old locus tag: Dshi_4157
so part of: sequence
location: 3833..5632
location: region:3833-5632:1
so has part: feature:3833-5632:1:exon
subclass of: SO_0000010

position:3833:1
position: 3833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5632:1
position: 5632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3833-5632:1:exon

DSHI_RS20860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20860
old locus tag: Dshi_4157
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011569789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MLDSTVSDQTEAFLEAFGKALEDGDIAAATEMFLDDCYWRDLVSFTWNIKTVEGKDQVADMLRHQLGTTKPRGWALAEGEMPTEEDGVTTAWITFETDVARGYGLIRLKEGKIWTLLTTMVELKGHEEPKGFDRPLGAKHGAGKHRTTWAEERAREEAELGYTTQPYCLIIGGGQGGIALGARLRQLGVPTIIVEKNERPGDSWRNRYKSLCLHDPVWYDHLPYIKFPENWPVFSPKDKIGDWLEMYTKVMELNYWTRTTAKSAEFDEASGTWTVVVDRDGEEVVLRPTQLVMATGMSGKARMPDFPGMDTFKGDQHHSSKHPGPDPYKGKKAVVIGSNNSAHDICAALWEGDVDVTMVQRSSTHIVRSDTLMDVGLGALYSEEAVANGVTTEKADLIFASLPYAILHEFQIPAYEEMKRRDAEFYEGLEKAGFWLDWGDDGSGLFMKYLRRGSGYYIDIGASQLIIDGEIKLKRGQVTEVVEDGVILDDGTKLEADLIVYATGYNSMNGWVADLMGQDKADQLGKVWGLGSDTTKDPGPWEGEQRNMWKPTQVPNLWMHGGNLHQSRHYSQFLSLQIKARMEGIPTPVYGLQEVHHLS
SIO_010081: DSHI_RS20860
subclass of: SO_0000673
so part of: DSHI_RS20860
location: 3833..5632
location: region:3833-5632:1
so has part: feature:3833-5632:1:exon

WP_012187434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3833-5632:1:exon

DSHI_RS20865
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20865
old locus tag: Dshi_4158
so part of: sequence
location: 5711..6484
location: region:5711-6484:1
so has part: feature:5711-6484:1:exon
subclass of: SO_0000010

position:5711:1
position: 5711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6484:1
position: 6484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5711-6484:1:exon

DSHI_RS20865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20865
old locus tag: Dshi_4158
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005565102.1
GO function: GO:0019152 - acetoin dehydrogenase activity [Evidence IEA]
GO process: GO:0045150 - acetoin catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetoin reductase
translation: MATQKKVALVTGGAKGIGLGIAERLQRDGFALALVDMNGAQLEAAAAGLRDGPVIAITADVTQRDAVFAAVDRAEAELGGFDVMINNAGIAQVQPIAEITEAELDQVHEVNVKGVVWGIQAAAAKFKARGHGGSIISAASIAAHDGYAMLGAYCASKFAVRALTQVAAKEFAADGITVNAYCPGIVGTDMWTEIDARFAELTGAAKGATYDAFVKSIALGRSETPEDVAGLVSFLAGPDSAYMTGQCVIIDGGMVYR
SIO_010081: DSHI_RS20865
subclass of: SO_0000673
so part of: DSHI_RS20865
location: 5711..6484
location: region:5711-6484:1
so has part: feature:5711-6484:1:exon

WP_012187435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5711-6484:1:exon

DSHI_RS20870
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20870
old locus tag: Dshi_4159
so part of: sequence
location: 6606..7658
location: region:6606-7658:1
so has part: feature:6606-7658:1:exon
subclass of: SO_0000010

position:6606:1
position: 6606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7658:1
position: 7658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6606-7658:1:exon

DSHI_RS20870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20870
old locus tag: Dshi_4159
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018001415.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,3-butanediol dehydrogenase
translation: MKAARWHGAKDIRVEDVDEPTPGAGEVKIKVAWTGICGSDLHEFLAGPIFVPVGEDHPLSHDKAPITMGHEYCGEITELGDGVTDLSVGDRVAIEPIFACGTCAACRDGRYNLCEKLGFVGLSGGHGGFAAYSVVPARMLHRMPEGLSMEQGALVEPAAVALHAVRVSAFKAGDRAAVFGAGPIGLLVVESLRIAGASKIVVVEPSETRRAKAMELGATTAVDPGAEDAVAAVQAACPGGVEVAFEVTGVPAVLAQAIDATRYEGETLVVSIWETEASFQPNTVVLKERNIKGTIAYRNVYPAVMDLMQQGYFQAERLVTRRIGLDDIVRDGFEALVAEKSQIKILVEAP
SIO_010081: DSHI_RS20870
subclass of: SO_0000673
so part of: DSHI_RS20870
location: 6606..7658
location: region:6606-7658:1
so has part: feature:6606-7658:1:exon

WP_012187436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6606-7658:1:exon

DSHI_RS20875
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20875
old locus tag: Dshi_4160
so part of: sequence
location: complement(7713..8699)
location: region:7713-8699:-1
so has part: feature:7713-8699:-1:exon
subclass of: SO_0000010

position:7713:-1
position: 7713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8699:-1
position: 8699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7713-8699:-1:exon

DSHI_RS20875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20875
old locus tag: Dshi_4160
EC number: 1.3.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011056423.1
GO function: GO:0016630 - protochlorophyllide reductase activity [Evidence IEA]
GO process: GO:0015995 - chlorophyll biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protochlorophyllide reductase
translation: MTLDPMPRAIVTGASSGVGLHATKSLIDRGWHVTMACRDLAKAEAAARSLDLDPGRYALAHLDLGSLASVRAFHANIARDHDSLDALVCNAAVYKPRLTQPGRSPDGFEISVATNYFGHFLLANLMLPLLEGAPSPRLITLGTVTANSEEFGGKVPIPAPADLGDFAGLKAGFRAPVAMIDGKPFKAGKAYKDSKLCTMMMSRELHTRHHARTGIVFATLYPGCVADTPLFRDTPKAFQTIFPWFQKNVTKGYVSQALSGERVAMVVADPEFAQSGVHWSWGNRQREGRSAFAQGLSTKATDAARSAELWELTAALTGLTTPAEPVAA
SIO_010081: DSHI_RS20875
subclass of: SO_0000673
so part of: DSHI_RS20875
location: complement(7713..8699)
location: region:7713-8699:-1
so has part: feature:7713-8699:-1:exon

WP_012187437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7713-8699:-1:exon

DSHI_RS20880
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20880
old locus tag: Dshi_4161
so part of: sequence
location: 8902..9714
location: region:8902-9714:1
so has part: feature:8902-9714:1:exon
subclass of: SO_0000010

position:8902:1
position: 8902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9714:1
position: 9714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8902-9714:1:exon

DSHI_RS20880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20880
old locus tag: Dshi_4161
inference: COORDINATES: protein motif:HMM:NF018352.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MipA/OmpV family protein
translation: MRRFPRPGALIQGALAALALVGAAGTAMAETPIELPGVRGVGLLAFGAGPQYIGADESVWLPVPAGTFALGETRRVTVTGNYLNIDLLDHPNWSAGPAGVLRFGRGDVKDDEVAALPDIDMSLDLGGFVAYEVVGADIRQRRAVGLSVVQDVTGAHGGFVASAYARAWTPLGAFGALGMGAAVSYGSGDYMDSYFSVDAQGAAASGLEVFSAGGGARDARVFAIYVQPVSRSWAIGGGLIYGWLLDDAAASPVVDSRGQLYAGVGIARIW
SIO_010081: DSHI_RS20880
subclass of: SO_0000673
so part of: DSHI_RS20880
location: 8902..9714
location: region:8902-9714:1
so has part: feature:8902-9714:1:exon

WP_012187438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8902-9714:1:exon

DSHI_RS20885
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20885
old locus tag: Dshi_4162
so part of: sequence
location: complement(9725..10768)
location: region:9725-10768:-1
so has part: feature:9725-10768:-1:exon
subclass of: SO_0000010

position:9725:-1
position: 9725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10768:-1
position: 10768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9725-10768:-1:exon

DSHI_RS20885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20885
old locus tag: Dshi_4162
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011453435.1
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MSLRRAAFAIPGDLSTPTGGYIYERRLLEGLWAQGRDVTHIRLGTSFPDPTDADMADAIAQLAALEPDRAVILDGFISATLDTRALAALPLPTVAVVHHPLALESGLDAERRDRLYRVERDNLVHIDHVVVPSPNTARTLTASYGVAADRITIARPGTDRPTRPRAPATPPLILSVGIQHPRKGHDTLLRALARLTHLDWTAVIAGKAYDPAHAALLDRLLDETGLRDRVRIAGYVADAALAELYATATVFALATRYEGYGLVFDEALAHGLPIVSCATGAVPETVPAEAGQLVPPDDAAAFATALAALLTDDALRARTAAAAARAGTRLPGWDDTAATVGAVLETL
SIO_010081: DSHI_RS20885
subclass of: SO_0000673
so part of: DSHI_RS20885
location: complement(9725..10768)
location: region:9725-10768:-1
so has part: feature:9725-10768:-1:exon

WP_012187439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9725-10768:-1:exon

DSHI_RS20890
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20890
old locus tag: Dshi_4163
so part of: sequence
location: complement(10765..12342)
location: region:10765-12342:-1
so has part: feature:10765-12342:-1:exon
subclass of: SO_0000010

position:10765:-1
position: 10765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12342:-1
position: 12342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10765-12342:-1:exon

DSHI_RS20890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20890
old locus tag: Dshi_4163
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011453434.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MSAVATAPRARAGRGQNRGTWIGLILILALWELSGRLLVDSFVLASPSETLRYLVEDWRLMSRALGVTLSNAAAGFVIGNLAAVLLAGIAILWPRSERVVTGLALLVFCLPLVATGPILRVFFGPGSGPQIVLAALAVYYTTLIPLLVGLRAAPDSWFDLVRSYGRGRMAALVHVRLMAALPYLFAGLQIAAPAAFLGAMVGEFTGAERGMGVLTVRAIRALDVEMTWGLATVATAVAILAYLAIGAVARRVLLEAPPVILAAPAASGRSRPALDAGLVVALALAGWAGAIWLFGLNPFFAKGPLDVAEALIWAADAPQTRATIGAALAETAVFLLPGYLAGLAAGAGLAILLVLVPAIAGTAMPLAIALRSVPIVTTAPLIVLLLGRGAVGTITLVAVMVFFPSFVACLHGLRQAPGQVMDVFDSYAAGPVARLMRVRIPAMLPAFFAAARMAVPASVLAVTVVEWLATGAGIGSLMALSASLSDYDMLWSSVVLVSALSALGYAAVGVVERRVLATYAPEQLA
SIO_010081: DSHI_RS20890
subclass of: SO_0000673
so part of: DSHI_RS20890
location: complement(10765..12342)
location: region:10765-12342:-1
so has part: feature:10765-12342:-1:exon

WP_012187440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10765-12342:-1:exon

DSHI_RS20895
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20895
old locus tag: Dshi_4164
so part of: sequence
location: complement(12339..13145)
location: region:12339-13145:-1
so has part: feature:12339-13145:-1:exon
subclass of: SO_0000010

position:12339:-1
position: 12339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13145:-1
position: 13145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12339-13145:-1:exon

DSHI_RS20895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20895
old locus tag: Dshi_4164
EC number: 7.6.2.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012640787.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MAPDHAPTPPPEVACIALAKTFPGGTEAVRPLDLSFAAGQTTALVGPSGCGKSTVLRLVAGLESPSAGRIEIAGAPPAETLRRAGLSVAFQDPSLLPWRSVRGNIELALGLARRPVEAGEVDQLIRLVGLDGFAETRPAELSGGMRQRAAIARALATRPGLLLLDEPFGAVDELTRRQLAQDLPRIWEARGTTTLLVTHSVTEAVALSDRVIVLSPRPAEVVADIAIDLPRPRPEGVAQTDAAMALIEQVFAALSEGMARRQRPLAAQ
SIO_010081: DSHI_RS20895
subclass of: SO_0000673
so part of: DSHI_RS20895
location: complement(12339..13145)
location: region:12339-13145:-1
so has part: feature:12339-13145:-1:exon

WP_012187441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12339-13145:-1:exon

DSHI_RS20900
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20900
old locus tag: Dshi_4165
so part of: sequence
location: complement(13135..14130)
location: region:13135-14130:-1
so has part: feature:13135-14130:-1:exon
subclass of: SO_0000010

position:13135:-1
position: 13135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14130:-1
position: 14130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13135-14130:-1:exon

DSHI_RS20900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20900
old locus tag: Dshi_4165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008887891.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MPKTLTRRTVLGSAAAAAGATALGALPHRARAQSAVSLQLSWLHSSQFAGSYIALDRGWWAEAGLEVSLLPGGPNAPVEPPVVAGTALVGISAADYTAAAVEQGAPFKILGVAMQKNPFVVASLPANPVNEPADLVGKRIGMALANTPVLQALCTLNGVDMGGIDIVPTQYSAQPLLAGEVDCLLCWETDLPVAMAMQGVESLTMLMADHGYAVHSQTYIATEDSLANRRADLVALMSGEARGWDAYRADTDAAAELTLSMYPDAGLDLETQKLQAARQVPLMFSELTDANGFGWWTDETVAANIETLALLGRTVTPDLWDRSILEEVHGA
SIO_010081: DSHI_RS20900
subclass of: SO_0000673
so part of: DSHI_RS20900
location: complement(13135..14130)
location: region:13135-14130:-1
so has part: feature:13135-14130:-1:exon

WP_012187442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13135-14130:-1:exon

DSHI_RS20905
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20905
old locus tag: Dshi_4166
so part of: sequence
location: complement(14227..15177)
location: region:14227-15177:-1
so has part: feature:14227-15177:-1:exon
subclass of: SO_0000010

position:14227:-1
position: 14227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15177:-1
position: 15177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14227-15177:-1:exon

DSHI_RS20905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20905
old locus tag: Dshi_4166
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019955712.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysylphosphatidylglycerol synthase transmembrane domain-containing protein
translation: MSRPLPRRVLPVLQAALAVGLLALLWRAADGPAALASLKAADWRWLALGLAALSLQTVLSALRWQLTARQFGIALGTGHAIREYYLAQVVNQSLPGGMIGDAGRAVRARAQAGLLASGQAVVFERLAGQIAMFLTLAVGFGVTWALPGGLDWPAWLAGPLALALALGLALPLLIRGAARLPGATGRAAAGLRATVRRALMSGAALPGQIWLSLGTTLCNLAAFAVCARAVGVDLGPGAVAALVPLILVTMLIPLSISGWGLREGAAAALLPLAGATASGGLAASVAFGLTFAVASLPGIALIWAAPRPPVPRSGQP
SIO_010081: DSHI_RS20905
subclass of: SO_0000673
so part of: DSHI_RS20905
location: complement(14227..15177)
location: region:14227-15177:-1
so has part: feature:14227-15177:-1:exon

WP_012187443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14227-15177:-1:exon

DSHI_RS20910
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20910
old locus tag: Dshi_4167
so part of: sequence
location: complement(15174..16799)
location: region:15174-16799:-1
so has part: feature:15174-16799:-1:exon
subclass of: SO_0000010

position:15174:-1
position: 15174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16799:-1
position: 16799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15174-16799:-1:exon

DSHI_RS20910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20910
old locus tag: Dshi_4167
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011453430.1
GO function: GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfatase-like hydrolase/transferase
translation: MIPSPLRLGLGALVLHLVLVQPNHPAALTWGALAMFPLELPVILLVLAALPPGRVTAWLRAGLTALLVLIAVLKTADFAMFSALGRGFNPISDMALVEAGLRLSTGAIGPVLTGLAVVAALLAVAGVALAIWWATGVWAGLRLPRRAGLGLGVAAGLAAGVAGAEIGQAMGRWSLPVTPPGAAFTARVGVERMGMARATLADLRAFEIAAATDPLAGRADLLGAIDRDVLVVFVESYGRASLDTPLYAETHRATLAAAEARLGALGLSMRSGLLTAPTRGGQSWLSHATFANGLWVDNQTSYGAALASGRRTLFHLAAEAGFHTAAVMPQITLDWPEADLMGFETVLAAADLGYAGQPFNWVTMPDQFTFAAMDRLLRDRAETRPYFVQMALGSSHAPWVPVPELVPWEAIGDGTIFDPMAAAGDPPDVVWRDRDRVREQYRLALDYALRVVFDYAARHAGDPPLILVLGDHQAAGFVALDERAEVPVHLIGPADLVEVAAGWGWSPGLIPGPEAAPLRMDEMRDLILQSFASQAPPEGES
SIO_010081: DSHI_RS20910
subclass of: SO_0000673
so part of: DSHI_RS20910
location: complement(15174..16799)
location: region:15174-16799:-1
so has part: feature:15174-16799:-1:exon

WP_012187444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15174-16799:-1:exon

DSHI_RS20915
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20915
old locus tag: Dshi_4168
so part of: sequence
location: complement(16796..17503)
location: region:16796-17503:-1
so has part: feature:16796-17503:-1:exon
subclass of: SO_0000010

position:16796:-1
position: 16796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17503:-1
position: 17503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16796-17503:-1:exon

DSHI_RS20915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20915
old locus tag: Dshi_4168
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008887912.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-alcohol phosphatidyltransferase family protein
translation: MPVPGTGGPEDAFALAALLLAALTGLGAALLPGAGPLSVGLALAAFGTGAVIAGRDLRRAYPHGRLGLCNLVTLGRLALTSALLVPLVAGIGAAWPIFAVAGVALALDGVDGWLARKQGLASAFGARFDVEVDAALALILAVNAATGPAGLAAALLGLPRYLFVLAARGLPWMRRDLPERFSRKTVCVLQMGVLIALQAPVLPAALALPLVGLALAALAWSFAVDLRWLWRKRAA
SIO_010081: DSHI_RS20915
subclass of: SO_0000673
so part of: DSHI_RS20915
location: complement(16796..17503)
location: region:16796-17503:-1
so has part: feature:16796-17503:-1:exon

WP_245533105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16796-17503:-1:exon

DSHI_RS20920
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20920
old locus tag: Dshi_4169
so part of: sequence
location: 17646..18203
location: region:17646-18203:1
so has part: feature:17646-18203:1:exon
subclass of: SO_0000010

position:17646:1
position: 17646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18203:1
position: 18203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17646-18203:1:exon

DSHI_RS20920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20920
old locus tag: Dshi_4169
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011750582.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0022904 - respiratory electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome b
translation: MSQAETRYRAPARLFHWGMAVLILATIPVGVVMVQEGLPRPLQNSLFIFHKNVGVLLLLLVLARLAYRLWRPPAPLPPSVTGMQRTAAHLSHLALYTLLIVMPVAGYVRVKAGGFPIETLDALGVPSLVPRSDALAELAKTVHYLGSYAIAALIALHVCAAAYHGIAKRDGIFSRMWPPFGGTVD
SIO_010081: DSHI_RS20920
subclass of: SO_0000673
so part of: DSHI_RS20920
location: 17646..18203
location: region:17646-18203:1
so has part: feature:17646-18203:1:exon

WP_012187446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17646-18203:1:exon

DSHI_RS20925
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: mdoH
locus tag: DSHI_RS20925
old locus tag: Dshi_4170
so part of: sequence
location: 18287..19852
location: region:18287-19852:1
so has part: feature:18287-19852:1:exon
subclass of: SO_0000010

position:18287:1
position: 18287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19852:1
position: 19852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18287-19852:1:exon

DSHI_RS20925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: mdoH
locus tag: DSHI_RS20925
old locus tag: Dshi_4170
EC number: 2.4.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007818211.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucans biosynthesis glucosyltransferase MdoH
translation: MSLVEPISRAWRVDAGWPGPRAAGLGLALGLTLAIVAGFATSVTDWTPGALLALPLVMLGAVWIAGGAATALLGLALRPDPEPPVPAGWRPASRTALLVTLCKEDPAPLAAHLVALRAGLDRVGLDAGAHIFVLSDTSGAAAIAAEEAAFAPLIEAGTVTYRRRAENTGRKPGNIADWLAVHGDRFEHMMVLDADSRMSPDRIRRMIHRMDRTPALGLLQAGLALVPGRTRFGRHQRTGVRLLSRGFGRGFAAWTGDSGNYWGHNAIMRVAAFRSAAALPVLPGRAPFGGALLSHDFIEAAWIRRAGWAVALDPDMTGSAEDAPQTLAAFHARDRRWCQGNLQHLRLLAAPGLDPVSRLHLLMGVLSYLVAPVWLVLIALIALGLVPVAGALPLLVAALVLLIPKLCALVEGLCRSRSWARRAVILRAWVGELATSTLIAPLVMLRQAGAVLAVCLGRDCGWKTARRAGPTLPCGTVEAVAGAALVTLAVATSGSAALWLAPVALPLCCAPLIVPVLDRAA
SIO_010081: DSHI_RS20925
subclass of: SO_0000673
so part of: DSHI_RS20925
location: 18287..19852
location: region:18287-19852:1
so has part: feature:18287-19852:1:exon

WP_012187447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18287-19852:1:exon

DSHI_RS20930
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20930
old locus tag: Dshi_4171
so part of: sequence
location: 19852..21336
location: region:19852-21336:1
so has part: feature:19852-21336:1:exon
subclass of: SO_0000010

position:21336:1
position: 21336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19852-21336:1:exon

DSHI_RS20930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20930
old locus tag: Dshi_4171
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007818209.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucan biosynthesis protein
translation: MRRRTFLAGATCLATLPRLAPAQSVPTLLDAARALAAQPFARDTAPLPPPFAGLSYDAYRGIRPIPGRAALLPHGPDFAVDLLPPGLFFPDPVRIDLDRGDGPQEVTLTPDLFDFAPRYFDTIPATAPGAGFSGLRLRHPLNTPDVLDEVLVVQGASYFRAIGQAMVYGLSARAVALGTGGAGPEEFPRFTHLRLHPARDGTVRLEAVIDSPSLAGHLDMVLRPGEDTVCDVAVTLLPRREIADIGIAPLTSMYLKGPLRAAVSDDFRPRVHDSDVLRIENGAGETLWRPIANPARLETSAFLDDGPVSFGLFQSRRRFTDFEDTEARYHDRPAAVVRPSGDWGRGAVMLVEIPTSDEFMDNIVAFWRPEAPLTAGSEHRFAYSLTWTRAAPGTGLPHAIAQSRSGREHDRPGTRRYVIDIAGDATGLAPEITGPEAVAITGVSLFALPEGRGSRLTFLLIPGEARAADLRVTLGVNGAPVWLHRWTRARDGGV
SIO_010081: DSHI_RS20930
subclass of: SO_0000673
so part of: DSHI_RS20930
location: 19852..21336
location: region:19852-21336:1
so has part: feature:19852-21336:1:exon

WP_012187448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19852-21336:1:exon

DSHI_RS20935
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20935
old locus tag: Dshi_4172
so part of: sequence
location: 21403..22290
location: region:21403-22290:1
so has part: feature:21403-22290:1:exon
subclass of: SO_0000010

position:21403:1
position: 21403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22290:1
position: 22290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21403-22290:1:exon

DSHI_RS20935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20935
old locus tag: Dshi_4172
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013964106.1
GO function: GO:0043565 - sequence-specific DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MPRRYQDIYPSLPLLNSEAQTHISAAALMSVRYFQAAPDEMPEDVFAEHHVLLNLQDAPHRVQNRRDGVLHDFTFHKHEIVVTPAGMRSGWRWFATSDVIVVTLDPEMVGRFAQSELGLLLDPQQFRDLPLFSDPDLCAAGVMLRDALEDDSLTSGVMFEALSRVLLVKLLQRYGQRRVEDADLSARFTAQHYNRVLTHIRAHLDRTITVEHLSREAGMSPSHFSRVFKETLGTTPMQYVMAYRIEQAMKMMADPLRPLGDIALACGFADQAHFSRSFKQVTGRTPRAHRAALSA
SIO_010081: DSHI_RS20935
subclass of: SO_0000673
so part of: DSHI_RS20935
location: 21403..22290
location: region:21403-22290:1
so has part: feature:21403-22290:1:exon

WP_012187449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21403-22290:1:exon

DSHI_RS20940
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20940
old locus tag: Dshi_4173
so part of: sequence
location: 22428..23387
location: region:22428-23387:1
so has part: feature:22428-23387:1:exon
subclass of: SO_0000010

position:22428:1
position: 22428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23387:1
position: 23387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22428-23387:1:exon

DSHI_RS20940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20940
old locus tag: Dshi_4173
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008232814.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MKTFALTTAAALLASTAVMAQAETRTISFENAGATLTGTLHLPEDHDGRALPVVVVTGAWTSVEEQMPSVYAAEMVARGFAAVTFDFRGWGKSGDLPGAVRYVESPAAKTADIRAAFDFVATLPEIDPTRINGLAICASAGYMIDAAAGNDRVQHLGLVAPWLQNAEIVEAVYGGPEGVAGLIAVSRRAEAAGGEIIPAAGPEGAEGVLMPIGGYYFEPDRGAIPAYDNRWNNAGWEGWLTYHPADNGARLTQPLAIVHSEAAAIPQGVRAFLDGYAGQATLRMFDGVTQFDFYDTPEAVRHAADTVAAHFAAAPDGNI
SIO_010081: DSHI_RS20940
subclass of: SO_0000673
so part of: DSHI_RS20940
location: 22428..23387
location: region:22428-23387:1
so has part: feature:22428-23387:1:exon

WP_012187450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22428-23387:1:exon

DSHI_RS20945
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20945
old locus tag: Dshi_4174
so part of: sequence
location: 23458..24015
location: region:23458-24015:1
so has part: feature:23458-24015:1:exon
subclass of: SO_0000010

position:23458:1
position: 23458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24015:1
position: 24015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23458-24015:1:exon

DSHI_RS20945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20945
old locus tag: Dshi_4174
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011454444.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nuclear transport factor 2 family protein
translation: MKALLLSAALALPLAAPVSASASLGGTPVTAETLVDRAEMIRIADAIDAAVDAKDWPVARSFFADEIMVDFTSLIGGDPATIPADALIAGWAGNLTDEKTSFHLRGNHRIGFDGADRAVMQSHGYAWNRMDRGAAPENGGDPLWEVWGSYTHVFERSEAGWKVTAMTFTAMAQRGNSFVRDTPGS
SIO_010081: DSHI_RS20945
subclass of: SO_0000673
so part of: DSHI_RS20945
location: 23458..24015
location: region:23458-24015:1
so has part: feature:23458-24015:1:exon

WP_012187451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23458-24015:1:exon

DSHI_RS20950
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20950
old locus tag: Dshi_4175
so part of: sequence
location: complement(24079..25098)
location: region:24079-25098:-1
so has part: feature:24079-25098:-1:exon
subclass of: SO_0000010

position:24079:-1
position: 24079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25098:-1
position: 25098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24079-25098:-1:exon

DSHI_RS20950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20950
old locus tag: Dshi_4175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014880911.1
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AI-2E family transporter
translation: MIDLLLSQRAARVMLALLAAIALVAALHLAQHILAPTVFALVLGIVISPVADRLYGLGVPRLAVAVLLLVATLALIGLALLLVEPLFSLLIDELPRIKVAVAGWIETASGLLRGIETISAEIENSVGAQAAQPQTAVPSVRDALWLAPGFAAQVFIFVGVLFFFVLTRSELYAGTGPMEQRFRRADRAVARYFAAVTLVNIGLGVVTAMVLTAAGVNYAVLWGLAAALLNFILYLGPMMIIAGLTIAGLVQFSGAQAFLPPFLFLLLNLTEANFVTPLVVGKRLAMNPLLIFTAIVFGLWLWGPVGAIVALPVLLWAGVVMRPSLAMRGPGAAPYVHVG
SIO_010081: DSHI_RS20950
subclass of: SO_0000673
so part of: DSHI_RS20950
location: complement(24079..25098)
location: region:24079-25098:-1
so has part: feature:24079-25098:-1:exon

WP_012187452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24079-25098:-1:exon

DSHI_RS20955
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20955
old locus tag: Dshi_4176
so part of: sequence
location: 25262..25924
location: region:25262-25924:1
so has part: feature:25262-25924:1:exon
subclass of: SO_0000010

position:25262:1
position: 25262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25924:1
position: 25924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25262-25924:1:exon

DSHI_RS20955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20955
old locus tag: Dshi_4176
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807159.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxidoreductase FAD/NAD(P)-binding subunit
translation: MTHKITLLETVELTPDTRHYVFTRPEGYGFTPGQATDFALDRYGWRDATRPFTFTGDPEADVLCFTIKTYADREGVTDALWSATPGDGALIGDPWGAISDKGPGVFIAGGAGITPFLGILKARARAGQLDGATLIFANGGPRDIIFRPLWDSLKGLKTVYAVSEDGAGFAYRRITGEMLEAEIDDWDQRFYVCGPPPMEEDVVAMLTARGVPEDSIIREA
SIO_010081: DSHI_RS20955
subclass of: SO_0000673
so part of: DSHI_RS20955
location: 25262..25924
location: region:25262-25924:1
so has part: feature:25262-25924:1:exon

WP_012187453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25262-25924:1:exon

DSHI_RS20960
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20960
old locus tag: Dshi_4177
so part of: sequence
location: complement(26016..27332)
location: region:26016-27332:-1
so has part: feature:26016-27332:-1:exon
subclass of: SO_0000010

position:26016:-1
position: 26016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27332:-1
position: 27332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26016-27332:-1:exon

DSHI_RS20960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20960
old locus tag: Dshi_4177
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009564143.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetamidase/formamidase family protein
translation: MPDGSTPNSRRSVVVSEFTNSVLDPEAPMLGPIENGGTIIANTAPGCWGPMITPRLRGGHEVTTPVHVQGAEVGDGVAIRIRDITVTSLATASGHDSSPEGFCLGDPYVAARCPVCDTVWPETHVEGIGQDAVKCDSCGNAVTPFEIVHGYTVTFDETRSVGLTLPQEAAETLARDADHYAALPDASRQHSILTYAPSDMPGTLVRMRPFMGQLGTCPSMAMPDSHNAGDFGAFLVGAPHDYAITAEQLAEHKTDGHMDIDAVRAGAIIVCPVKVPGAGVYMGDMHAGQGDGEIAGHTMDVSGSVTLQVEVVKNYPIDGPVLFPLEEDLPPLARPFTEAEKAKGDRLAAKWGVKEIEPLAPISVIGTAANLNDAIENGLARAATLLDMTVAEVRNRATINGAIEIGRAPGVIQVTFLAPLSKLDAVGLGECAREQYGL
SIO_010081: DSHI_RS20960
subclass of: SO_0000673
so part of: DSHI_RS20960
location: complement(26016..27332)
location: region:26016-27332:-1
so has part: feature:26016-27332:-1:exon

WP_012187454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26016-27332:-1:exon

DSHI_RS20965
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20965
old locus tag: Dshi_4178
so part of: sequence
location: complement(27466..28224)
location: region:27466-28224:-1
so has part: feature:27466-28224:-1:exon
subclass of: SO_0000010

position:27466:-1
position: 27466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28224:-1
position: 28224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27466-28224:-1:exon

DSHI_RS20965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20965
old locus tag: Dshi_4178
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011568662.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3618 domain-containing protein
translation: MPDRTDAIERDIQTHRGLLAEAVSQLAGALSPERVSEAVGRDLQARGGVVAEAAMERAKANPLALLLVGAGVAAMVAGPSKPAARPVYDDGRQSRASVAGARDPLSGEFDRRVAAATEGRPRPDASALRKALNSGLAHLPEPARRRVVEARKAAIAAQEEVERRGAAAAREARRLHRRQPWSTAALAFGLGALAGTALPRTEIEDDAMGAQRDALLQEAEFALRDELARMSETGQAALHEGLDAVTERISRH
SIO_010081: DSHI_RS20965
subclass of: SO_0000673
so part of: DSHI_RS20965
location: complement(27466..28224)
location: region:27466-28224:-1
so has part: feature:27466-28224:-1:exon

WP_012187455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27466-28224:-1:exon

DSHI_RS20970
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20970
old locus tag: Dshi_4179
so part of: sequence
location: complement(28217..28627)
location: region:28217-28627:-1
so has part: feature:28217-28627:-1:exon
subclass of: SO_0000010

position:28217:-1
position: 28217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28627:-1
position: 28627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28217-28627:-1:exon

DSHI_RS20970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20970
old locus tag: Dshi_4179
inference: COORDINATES: protein motif:HMM:NF018980.2
GO component: GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage holin family protein
translation: MDNPDRHDPAPQDAPALLSELMQHLRGLVEAEIALARAEIRRKLSDAGTGVTLVLCAIPLALVGLGLILTALVGALLALGWPLWLAALVPGAVCLVLAALLALVGKSRLSVAALTPQKILSHVRKDLQMLKETTHA
SIO_010081: DSHI_RS20970
subclass of: SO_0000673
so part of: DSHI_RS20970
location: complement(28217..28627)
location: region:28217-28627:-1
so has part: feature:28217-28627:-1:exon

WP_012187456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28217-28627:-1:exon

DSHI_RS21570
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21570
old locus tag: Dshi_4180
so part of: sequence
location: complement(28620..29135)
location: region:28620-29135:-1
so has part: feature:28620-29135:-1:exon
subclass of: SO_0000010

position:28620:-1
position: 28620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29135:-1
position: 29135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28620-29135:-1:exon

DSHI_RS21570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21570
old locus tag: Dshi_4180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013960077.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTETQTSALRQELDSAAADATETARRAARDTGETVKDRARSEVETAADAASAAGERFDPDSLQAEAAQQIARGLDQLAVQLRDTDLSGAARSATRFARENPAVTLGGAALLGFAVARFLKASADPETAAADAPREAGSDPWTGHVTGPDAETPASDPSRVHTRAYGGARHG
SIO_010081: DSHI_RS21570
subclass of: SO_0000673
so part of: DSHI_RS21570
location: complement(28620..29135)
location: region:28620-29135:-1
so has part: feature:28620-29135:-1:exon

WP_012187457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28620-29135:-1:exon

DSHI_RS20980
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20980
old locus tag: Dshi_4181
so part of: sequence
location: complement(29307..29495)
location: region:29307-29495:-1
so has part: feature:29307-29495:-1:exon
subclass of: SO_0000010

position:29307:-1
position: 29307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29495:-1
position: 29495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29307-29495:-1:exon

DSHI_RS20980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20980
old locus tag: Dshi_4181
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008189426.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PLDc N-terminal domain-containing protein
translation: MEYGIIGLIVLIANIYALVKTWTSAASTGAKLLWTLLILVLPVIGFIIWFFAGPRGAAGRTA
SIO_010081: DSHI_RS20980
subclass of: SO_0000673
so part of: DSHI_RS20980
location: complement(29307..29495)
location: region:29307-29495:-1
so has part: feature:29307-29495:-1:exon

WP_012187458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29307-29495:-1:exon

DSHI_RS20985
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20985
old locus tag: Dshi_4182
so part of: sequence
location: 29613..30521
location: region:29613-30521:1
so has part: feature:29613-30521:1:exon
subclass of: SO_0000010

position:29613:1
position: 29613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30521:1
position: 30521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29613-30521:1:exon

DSHI_RS20985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20985
old locus tag: Dshi_4182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014878952.1
GO function: GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mechanosensitive ion channel family protein
translation: MDTVEEIFPQNITAHLVAQLSGWAEGLIAALPRLTLALAVILVTALVVWAVRRLIQSLGRRAGLRRNLRDVLGMLANTGLWLAGLLLALTIVFPSITPGRALTTLGLGSVAIGFAFKDTLENFLAGILILLREPFTIGDHVDCEGAEGQVEQITIRDTHIRQTDGQLVVVPNAMLFHNPVTVRTDQEFRRARIVCGVAYGEDVDAARKVIEDAVREVDMVRNDVRDIQVFAMAFGASSIDFEITWWTGSAPVDIRASRDQVVAAVKGALDAAGIEIPFPYRTLTLQGDALPVQVMKGRNAAE
SIO_010081: DSHI_RS20985
subclass of: SO_0000673
so part of: DSHI_RS20985
location: 29613..30521
location: region:29613-30521:1
so has part: feature:29613-30521:1:exon

WP_050757934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29613-30521:1:exon

DSHI_RS20990
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20990
old locus tag: Dshi_4183
so part of: sequence
location: complement(30634..30933)
location: region:30634-30933:-1
so has part: feature:30634-30933:-1:exon
subclass of: SO_0000010

position:30634:-1
position: 30634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30933:-1
position: 30933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30634-30933:-1:exon

DSHI_RS20990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20990
old locus tag: Dshi_4183
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF883 family protein
translation: MSDVTHHHIPQPGDEKGAGNGRDRTVQAVQEAAETARDTLRETGESLSAASRDLAQAGAQQIETAHDTGTKFVKDNPTLALGAALGVGVLLGMALRTRS
SIO_010081: DSHI_RS20990
subclass of: SO_0000673
so part of: DSHI_RS20990
location: complement(30634..30933)
location: region:30634-30933:-1
so has part: feature:30634-30933:-1:exon

WP_012187460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30634-30933:-1:exon

DSHI_RS20995
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20995
old locus tag: Dshi_4184
so part of: sequence
location: complement(31088..31285)
location: region:31088-31285:-1
so has part: feature:31088-31285:-1:exon
subclass of: SO_0000010

position:31088:-1
position: 31088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31285:-1
position: 31285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31088-31285:-1:exon

DSHI_RS20995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20995
old locus tag: Dshi_4184
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019296333.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CsbD family protein
translation: MDSDRIEGKWTELKGKLREQYGDLTDDEIEEARGNREQLEGKLQQKYGKTKDEARKEVDRMLDSI
SIO_010081: DSHI_RS20995
subclass of: SO_0000673
so part of: DSHI_RS20995
location: complement(31088..31285)
location: region:31088-31285:-1
so has part: feature:31088-31285:-1:exon

WP_012187461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31088-31285:-1:exon

DSHI_RS21000
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21000
old locus tag: Dshi_4185
so part of: sequence
location: 31537..32229
location: region:31537-32229:1
so has part: feature:31537-32229:1:exon
subclass of: SO_0000010

position:31537:1
position: 31537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32229:1
position: 32229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31537-32229:1:exon

DSHI_RS21000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21000
old locus tag: Dshi_4185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012179200.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FCD domain-containing protein
translation: MLTRTDQPERDECAERLRALIAEGGYAPGDRIPPERQLIEMMGITRAGLRRALDFLERDGVIWRHVGKGTFVSYGATDAVTEDAFAGIGNQLSPYRMMRARICVEPAIAREAAVYASREQVARIDAAAKRARAAASWSEYERQDDQFHRAVAEAADNALLLALFDSLNRVRREVAWGAVTRSNARPPRDHSSFAEHDAICAALAAHDADAAFQAMRAHLQSVSSRLFEGI
SIO_010081: DSHI_RS21000
subclass of: SO_0000673
so part of: DSHI_RS21000
location: 31537..32229
location: region:31537-32229:1
so has part: feature:31537-32229:1:exon

WP_012187462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31537-32229:1:exon

DSHI_RS21005
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21005
old locus tag: Dshi_4186
so part of: sequence
location: 32317..33138
location: region:32317-33138:1
so has part: feature:32317-33138:1:exon
subclass of: SO_0000010

position:32317:1
position: 32317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33138:1
position: 33138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32317-33138:1:exon

DSHI_RS21005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21005
old locus tag: Dshi_4186
EC number: 7.6.2.14
inference: COORDINATES: protein motif:HMM:NF012235.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MKDALLDVPAIELRGIRKTFTLSEDRDAQKVLALDGIDLTIRQGEFLTIIGPSGCGKTTLLKIIASLISHDEGDVVVEGKPVHEPDISRAMVFQTFGLFPWKTVIDNVTFPLTVRNFAPAEAREIAMKHIEQVGLGKFVDAYPHQLSGGMQQRVGLARALSTGADILLMDEPFGAIDAQTRELMQEELMRICQREQKTVVFITHDLDEAVLLADRVLLMSRGPGRVREVIDVDLPRPRFDYDVRGHASFIKVRGHLWHELRNDLVEQRAEEMS
SIO_010081: DSHI_RS21005
subclass of: SO_0000673
so part of: DSHI_RS21005
location: 32317..33138
location: region:32317-33138:1
so has part: feature:32317-33138:1:exon

WP_012187463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32317-33138:1:exon

DSHI_RS21010
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21010
old locus tag: Dshi_4187
so part of: sequence
location: 33135..33890
location: region:33135-33890:1
so has part: feature:33135-33890:1:exon
subclass of: SO_0000010

position:33135:1
position: 33135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33890:1
position: 33890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33135-33890:1:exon

DSHI_RS21010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21010
old locus tag: Dshi_4187
inference: COORDINATES: protein motif:HMM:NF012738.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MKARTRKQVRRDQLIGVAVFLVVWEITAQIIDRSLVLPPVTAILAALWDLILSGELIVALSQSIFLLIVGLFVATVIGFVLGALIARSRTAYWMLNPYLSALFVTPTIALVPLVLVWFGFGFPGRVIVVVLAAVVPILFSVASGLRDSPGDLIDVARSFGVKGEIALLFKVRIRAALPVLLAGLRLAAGRGVVGMAVAETYLRLGGIGGLIKSYGAMFQTDYVFASILPLSLLGIAMVSAIGWVERRLHWT
SIO_010081: DSHI_RS21010
subclass of: SO_0000673
so part of: DSHI_RS21010
location: 33135..33890
location: region:33135-33890:1
so has part: feature:33135-33890:1:exon

WP_012187464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33135-33890:1:exon

DSHI_RS21575
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21575
old locus tag: Dshi_4188
so part of: sequence
location: 33904..34665
location: region:33904-34665:1
so has part: feature:33904-34665:1:exon
subclass of: SO_0000010

position:33904:1
position: 33904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34665:1
position: 34665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33904-34665:1:exon

DSHI_RS21575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21575
old locus tag: Dshi_4188
inference: COORDINATES: protein motif:HMM:NF012738.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MMKTLSRPSVLLPLLSLVVVFGAWELVGRSINPLLFAPPSEVARQFGELMRSGELLDATKITVQALFLGYFLAVIVGIPFGIAMGALPRFGDILQPYLYAIFSTPRVVVVPLIVVWFGIGFEARLFLVFFWSMIAISVNTAQGVRHARPDLVEVAHSFQASRLQMARHVLIPGAIPFVVSGLRIGAERAIVGVIIGEMFLQIVGLGGVITKGSTELLPAKMLCAVAVIAVLGTIIVTALDTFEKRFQVWKGPT
SIO_010081: DSHI_RS21575
subclass of: SO_0000673
so part of: DSHI_RS21575
location: 33904..34665
location: region:33904-34665:1
so has part: feature:33904-34665:1:exon

WP_012187465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33904-34665:1:exon

DSHI_RS21020
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21020
old locus tag: Dshi_4189
so part of: sequence
location: 34761..35777
location: region:34761-35777:1
so has part: feature:34761-35777:1:exon
subclass of: SO_0000010

position:34761:1
position: 34761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35777:1
position: 35777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34761-35777:1:exon

DSHI_RS21020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21020
old locus tag: Dshi_4189
inference: COORDINATES: protein motif:HMM:NF020650.2
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MTLSKMTGSLLAGAGLAALLAGSATAKEFDLSGTEVTIGTAQAQVLNLGTLRMIEMLTEWGADVTRVELPNISGLEAIVADRIDIASRSSDEILAGQSRGVDVVAFAAPISTMHYAVVSTPGIDSLEDLRGQSIATSGPGGFNGMLFRYMLTQAGLEPEVDVAIVPVGGSSERAAAIMAGQVQATVVFIDNWLALREQGANAQLLGYVADLVPGLSSRAVFAPRDYLAANEDLVTAIACANLEVNAWINSNKDDFVAYAMDNVRGANEDAVSAFYDVAMEINMFPTAPRELLDVSGYQALADLMYAGGELDDQLDASGFVDFTYVDRAAEMGCGTGAM
SIO_010081: DSHI_RS21020
subclass of: SO_0000673
so part of: DSHI_RS21020
location: 34761..35777
location: region:34761-35777:1
so has part: feature:34761-35777:1:exon

WP_012187466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34761-35777:1:exon

DSHI_RS21025
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21025
old locus tag: Dshi_4190
so part of: sequence
location: 35941..37218
location: region:35941-37218:1
so has part: feature:35941-37218:1:exon
subclass of: SO_0000010

position:35941:1
position: 35941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37218:1
position: 37218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35941-37218:1:exon

DSHI_RS21025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21025
old locus tag: Dshi_4190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGPKGTLIVSGRWDDNVAIVDIAQALLPENDGTPNAILSRPRATPDLDLDGDGVPDARASGQPVAVAVDVAARHAYVVCHSGDATPEGAAAYQHGHPGLVTVLDVAAATDPAHDDTLGAVVEFVSTGRTGPVGCALTPDGRALLVNCGEAEGSEDGGDEVTVIDVATRRVTARVPLALNPDHPARSPSPHDSPHESFGHYPNPTGIVISPRAGGVVFVGNGGFSDVSVLDLKAALAGSAEAEINRVAVETGPFGMALSPDGALVAVASRESMSRPTEGGTVSIIDVGRAAARRPDAELARIPVGGTTDEMPSRPFGVAFSQNGSRLVVSCFRTNAISILDVAAACAGKACELHRLYPEAPGGATPRPRGIAVCGPYACVIGGAKEGARSSLVWVVDIAAGTVVGTVTGVGNESYFLAAIPPPST
SIO_010081: DSHI_RS21025
subclass of: SO_0000673
so part of: DSHI_RS21025
location: 35941..37218
location: region:35941-37218:1
so has part: feature:35941-37218:1:exon

WP_012187467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35941-37218:1:exon

DSHI_RS21030
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21030
old locus tag: Dshi_4191
so part of: sequence
location: 37297..38292
location: region:37297-38292:1
so has part: feature:37297-38292:1:exon
subclass of: SO_0000010

position:37297:1
position: 37297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38292:1
position: 38292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37297-38292:1:exon

DSHI_RS21030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21030
old locus tag: Dshi_4191
inference: COORDINATES: protein motif:HMM:NF015445.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter substrate-binding protein
translation: MTHLTRRTALGLATAALLVAGTASAQDTLELRMSVESTPGASTQQILAAFRDALQAEMGDAVAIEYFDSGTLGDEIVHMQQVRTGQLDVIPIGSDAVQLDPKFAVFDIPFLFNSRDQVAAVLDGPIGAELDQSFQENAGLKVLGFGEIGFRHITNNVRPVVTPADLEGLKLRTPGSSTRIMSFEMLGASPIKMNIGEVYLALQQGVIDGQENPFGNIAKWSWDEVQKYISLSRHVYTPITLVMNLRTYEGLTDEQRDAVHAAARVAVDSSRAYGAENDASLEAVIRERSPDVELNEIDAASFRDVAKAIGAEIGKTAGEAFTARFVEAASQ
SIO_010081: DSHI_RS21030
subclass of: SO_0000673
so part of: DSHI_RS21030
location: 37297..38292
location: region:37297-38292:1
so has part: feature:37297-38292:1:exon

WP_012187468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37297-38292:1:exon

DSHI_RS21035
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21035
old locus tag: Dshi_4192
so part of: sequence
location: 38385..38972
location: region:38385-38972:1
so has part: feature:38385-38972:1:exon
subclass of: SO_0000010

position:38385:1
position: 38385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38972:1
position: 38972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38385-38972:1:exon

DSHI_RS21035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21035
old locus tag: Dshi_4192
inference: COORDINATES: protein motif:HMM:NF016200.2
GO component: GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter small permease
translation: MTQPDTDRDAEALAARLDQSARRMELADPDAGLGRLDRAINRVVEAIGVLALVLIVGVVFANASARYLLNFSFTWAEELVQMTIPWLAMSGVFLSVRRGTVIRIDFFYEKMPARLRPVVARAGLAFNCLVLAVMAYVSFDFVRLFGGDKTLYVGLPTGVSTSALVFGAAGVAMAYAAAFVSAFLGRTTNRNGHTP
SIO_010081: DSHI_RS21035
subclass of: SO_0000673
so part of: DSHI_RS21035
location: 38385..38972
location: region:38385-38972:1
so has part: feature:38385-38972:1:exon

WP_012187469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38385-38972:1:exon

DSHI_RS21040
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21040
old locus tag: Dshi_4193
so part of: sequence
location: 38969..40258
location: region:38969-40258:1
so has part: feature:38969-40258:1:exon
subclass of: SO_0000010

position:38969:1
position: 38969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40258:1
position: 40258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38969-40258:1:exon

DSHI_RS21040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21040
old locus tag: Dshi_4193
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018389699.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter large permease
translation: MTPLLGAGLSIVLLCGLLVFRIPMIVAIMSVVFFSNFMSGAWMLTLPQTMMSGISRFVLIALPLFVLAGGIMNAGGISGRLFEFARALVGSLRGGLAHVNVVTSMFFGGMIGSSTADLAGTGSIVIPEMRKNGYPADFSAALTASSAGIGPMIPPSSPMILYSAMTGVSLGALFLAGLIPGLLLGFLLMLIVAWLAKRNRWEAYAAFSLSEVVRTGRRAILSFGMPLIIVGGLVVGIFTPSEAGAFAVVYALVLATVVHRMLDFRGLYRVLANAVQLSGELLIIVGLSFALGSALTNARVPEFLVEFIDFATVIDSMYFRLLVLLALAILAGMILDPLIPVLMPIILPTLIFYEVDLVHFGVLMVIAVVIGQVTPPLAIALIIAGKIADIDQIRVMKANMPFFLGIVAFLLFAIAVPGLATWLPDLMRN
SIO_010081: DSHI_RS21040
subclass of: SO_0000673
so part of: DSHI_RS21040
location: 38969..40258
location: region:38969-40258:1
so has part: feature:38969-40258:1:exon

WP_012187470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38969-40258:1:exon

DSHI_RS21045
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21045
old locus tag: Dshi_4194
so part of: sequence
location: complement(40279..41874)
location: region:40279-41874:-1
so has part: feature:40279-41874:-1:exon
subclass of: SO_0000010

position:40279:-1
position: 40279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41874:-1
position: 41874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40279-41874:-1:exon

DSHI_RS21045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21045
old locus tag: Dshi_4194
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005848685.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gamma-glutamyltransferase family protein
translation: MSLRHDALYASRRSPVLADNVVSTSHPLAAQAGLSMLARGGNAVDAAIAAAAVLTVVEPTGNGLGSDAFCILWDGSELHGLNASGAAPAGWTPERFAGLDAIPFRGWESVTVPGAVSAWAELAGRFGTLDLPTLLAPAIGYAEDGFVVTPVIGELWARGAEMLSAQPGFAANFMPGGRAPRAGERYRNPDHARTLQTIAESGGRAFYEGVLAERIAAFAAEHGAALSAADLAAHRPEWCGTISGGFDAQELHEIPPNGQGIAAIMALGMLEQTGIRDLGPDDPRALHLQIEAIKLAFADLYRYVADGRWMAQVTAADLIDRGYLAERGRLIDPERAQEHGPGAPKHGGTVYLSTADASGMMVSFIQSNYSGFGSGVVVPGTGISLQNRGAGFSLEPGHPNEVGPGKRPFHTIIPGFLMQDGAPRMSFGVMGGPMQAQGHVQMVLRTRLWGQDVQTAVDAPRWRFVAGAEVACEEALPAPTRARLTEMGHRISVEPPDSAFGFGGAQLIARLDGGGYAAGSDPRKDGQAVGF
SIO_010081: DSHI_RS21045
subclass of: SO_0000673
so part of: DSHI_RS21045
location: complement(40279..41874)
location: region:40279-41874:-1
so has part: feature:40279-41874:-1:exon

WP_012187471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40279-41874:-1:exon

DSHI_RS21050
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21050
old locus tag: Dshi_4195
so part of: sequence
location: complement(41874..43385)
location: region:41874-43385:-1
so has part: feature:41874-43385:-1:exon
subclass of: SO_0000010

position:43385:-1
position: 43385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41874-43385:-1:exon

DSHI_RS21050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21050
old locus tag: Dshi_4195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007088644.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter permease
translation: MEAFMLGAAEVLSLTTLAMMLAGAIAGIIAAAIPGFTVTMAIVLTLPLTFTMDPLQGISVMLSVYVGGYTGGLISAALLGIPGTPSSVATTFDAFPMARGGEPGRALSLGVWASFFGTVISTAVLIVAAPPLAVFAVRLGPWEYFSLIVFALTIVASLVGNSLQRGLIAALIGLAISTIGADPIMGRPRFDMGWELLRAGLPFLVVLIGIFAISQLASEVEDAKAIKRGEKLVDGDIDFKTWSVMREVLSRPVNLVRSSMVGVAIGALPGAGGSIANLVAYDQAKRASKTPEAFGTGTPDGIVASESGNSATAGGGLIPLISLGIPGSAVDAILMASLMVHGISVGPRLIMDNADLVYGMFIAMAVSSLMMLVVCVVSMRAFLRVAEVPKWVVVPVVLVCCVVGSFALNNRVTDLYLLAAIGLVGYALKALDYPLAPLVLGVILGPIAETNLRRALMTDADWTLFLTRPVSLIFLVAAVLSVAWAIRGILKARNQADPGKDPA
SIO_010081: DSHI_RS21050
subclass of: SO_0000673
so part of: DSHI_RS21050
location: complement(41874..43385)
location: region:41874-43385:-1
so has part: feature:41874-43385:-1:exon

WP_012187472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41874-43385:-1:exon

DSHI_RS21055
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21055
old locus tag: Dshi_4196
so part of: sequence
location: complement(43389..43895)
location: region:43389-43895:-1
so has part: feature:43389-43895:-1:exon
subclass of: SO_0000010

position:43389:-1
position: 43389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43895:-1
position: 43895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43389-43895:-1:exon

DSHI_RS21055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21055
old locus tag: Dshi_4196
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008191458.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter TctB family protein
translation: MSGTDRQPTAQSGEVARLLSYIALLAVSVGLFIEARAIPTSRFEVLGAGAFPMLVHGCLSLLLIGSIAGSLRKLPGDAYGRFVSDVLLWVRTRRLVIVLFVCLGVYVLSMPVLGYPVATFFFLLVLQVTLAPKTRLAFGIALALALIFSFGLNWLFAEVFNVFLPRGG
SIO_010081: DSHI_RS21055
subclass of: SO_0000673
so part of: DSHI_RS21055
location: complement(43389..43895)
location: region:43389-43895:-1
so has part: feature:43389-43895:-1:exon

WP_012187473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43389-43895:-1:exon

DSHI_RS21060
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21060
old locus tag: Dshi_4197
so part of: sequence
location: complement(43895..44845)
location: region:43895-44845:-1
so has part: feature:43895-44845:-1:exon
subclass of: SO_0000010

position:44845:-1
position: 44845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43895-44845:-1:exon

DSHI_RS21060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21060
old locus tag: Dshi_4197
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005848679.1
GO component: GO:0042597 - periplasmic space [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter substrate binding protein
translation: MSLVTRALAGAGLVLASLALPASAQDYPTKPVEFIVPWSPGGGSDTLMRIVANNVTPFLGAEMPIINMPGVGGTVGLTEASRRDADGYTISQVHEGLLTATATGLTELKWNDFDPIALLTASPQYLVAAADQPFDTMEGLVEYAQANPGTLTIGVTLGGVPHLHAAMIAEAFDLDWRYVGYEGTGERIRAVVGGNLDLAIGDISSSLQFAENGDLVFLATGSTERMPQTPDVPTFMELGKDLDLSVTRGIVMPAGAPEEAQATLEKALMELSQDAAFVEQINNAGADVAFRGREDYAAYLTTLGETVDRLSEVIAP
SIO_010081: DSHI_RS21060
subclass of: SO_0000673
so part of: DSHI_RS21060
location: complement(43895..44845)
location: region:43895-44845:-1
so has part: feature:43895-44845:-1:exon

WP_012187474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43895-44845:-1:exon

DSHI_RS21065
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21065
old locus tag: Dshi_4198
so part of: sequence
location: 44991..45887
location: region:44991-45887:1
so has part: feature:44991-45887:1:exon
subclass of: SO_0000010

position:44991:1
position: 44991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45887:1
position: 45887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44991-45887:1:exon

DSHI_RS21065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21065
old locus tag: Dshi_4198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008195543.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MQTLVAVADTGSFAAAAGVVNLTPSAISQQIQSLEAEIGAQLFDRKKRPRQLNAQGEELVRAARSVVQTLTEARMTIAGGRTAGVLKLGAIRTVSMRLVPEALRGMRGRYPDLGFEMTVGMSERLMADVAAGRLDAALVAEHVGVPATLSWSPVLNEPLVIIAPPQEAWRSEVSLLRDLPFIRYATDVPLARQIETELSGLSIVPREVAVANTMPAVVGLVQAGLGVAVVPRIATLHGGPALHCRPFRDGAITRRVGLVQRQVSSRSRVLTELREILSEVALHRGLVLDPTPGRPGAA
SIO_010081: DSHI_RS21065
subclass of: SO_0000673
so part of: DSHI_RS21065
location: 44991..45887
location: region:44991-45887:1
so has part: feature:44991-45887:1:exon

WP_245533104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44991-45887:1:exon

DSHI_RS21070
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21070
old locus tag: Dshi_4199
so part of: sequence
location: complement(45953..46597)
location: region:45953-46597:-1
so has part: feature:45953-46597:-1:exon
subclass of: SO_0000010

position:45953:-1
position: 45953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46597:-1
position: 46597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45953-46597:-1:exon

DSHI_RS21070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21070
old locus tag: Dshi_4199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005859930.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MNTEAKAGQAAFDSAATRQRLPPKERREQIVAEAVRFFADVGLDGNTRDLAKRLGVTQSLLFRYFSTKDELLEAVYGTVYLDRLSPDWPERLCDRGVPLRARLIAFYSEYSALIFQREWMRIFMFSGLAGAALNRRYLEHLGEVILGPLLEETARLTRTARRPIMEDVWDLHGGIVYIGIRQHIYSMPAPDDPEEAIARAIDKYLAAFGIGPQD
SIO_010081: DSHI_RS21070
subclass of: SO_0000673
so part of: DSHI_RS21070
location: complement(45953..46597)
location: region:45953-46597:-1
so has part: feature:45953-46597:-1:exon

WP_012187476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45953-46597:-1:exon

DSHI_RS21075
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21075
old locus tag: Dshi_4200
so part of: sequence
location: 46743..47576
location: region:46743-47576:1
so has part: feature:46743-47576:1:exon
subclass of: SO_0000010

position:46743:1
position: 46743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47576:1
position: 47576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46743-47576:1:exon

DSHI_RS21075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21075
old locus tag: Dshi_4200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803811.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: xanthine dehydrogenase family protein subunit M
translation: MKASAGGYARANDLREALDLLANADGQGRVLAGGQSLIAAMNMRLSTGDMLVDISRIAELAGVAEDGETLRIGALTRHAAVGADPLVKTHVPLLAEATGHIAHAAIRNRGTIGGALSHADPAAEFPACALALGASMEIAGPDGSRTVAAEDFFEDVFTTALAEGEILTALTVPKQRPGEAQLIEEVARRSGDYALVGLCLVKRDAGHRVALFSVGATPILARACMARLDAGDLDGAVTALQGEIDPPSDTQASAAYRRHLAGVLLRRAMARLTGVPA
SIO_010081: DSHI_RS21075
subclass of: SO_0000673
so part of: DSHI_RS21075
location: 46743..47576
location: region:46743-47576:1
so has part: feature:46743-47576:1:exon

WP_012187477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46743-47576:1:exon

DSHI_RS21080
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21080
old locus tag: Dshi_4201
so part of: sequence
location: 47573..48073
location: region:47573-48073:1
so has part: feature:47573-48073:1:exon
subclass of: SO_0000010

position:47573:1
position: 47573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48073:1
position: 48073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47573-48073:1:exon

DSHI_RS21080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21080
old locus tag: Dshi_4201
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803810.1
GO function: GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (2Fe-2S)-binding protein
translation: MTEMFRDKIDVEITVNGEPVEARVPAGQHLIDFLRQTVGLTGAHASCEHGVCGACTVEVDGASVRGCLMLAAQADGAEVWTVEGLTERGRIADLQAAFIAHNALQCGFCTPGMLVACDELLRRGGTPSRAEIREHLSGNYCRCTGYEAIVDAVETVAKARAGKGAA
SIO_010081: DSHI_RS21080
subclass of: SO_0000673
so part of: DSHI_RS21080
location: 47573..48073
location: region:47573-48073:1
so has part: feature:47573-48073:1:exon

WP_012187478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47573-48073:1:exon

DSHI_RS21085
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21085
old locus tag: Dshi_4202
so part of: sequence
location: 48070..50451
location: region:48070-50451:1
so has part: feature:48070-50451:1:exon
subclass of: SO_0000010

position:48070:1
position: 48070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50451:1
position: 50451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48070-50451:1:exon

DSHI_RS21085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21085
old locus tag: Dshi_4202
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803808.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: xanthine dehydrogenase family protein molybdopterin-binding subunit
translation: MTIQFGNPDRPNSYIGKTVPRPNAAKLVQGRGQYVDDITLPRMVHVAFVRSPFAHAQITGIDAAEALATKGVLRVFTGADLAEVCTPWVAVLAHLKGLKSPPEHPIAIDRAVWVGEPVAAVVATSRAAAEEGAALVEVDYDPLPAVTDTMTALDADTPVIHPDLGDNLAFRRLHEEGDVDAAKAAAHKVVTARFRTARHTGVTLEPRSILVDWNPAEGQMTAYHATQAPHMMQSVLAKHLDIPESRVRVICGDVGGSYGIKVHVYPDEVATAAIAKVMGRPVKFIADRLESFTTDIHARDHEIEASIAVDADGKILAIDVNDWTGIGPYSVYPRTSAIEGNQVVNLCGGPYDFANYRARTSVVFQNKTPTCQYRAVGHPIAVAITEGLVDMAAAELGMDPVEIRRRNMYADDAYPVTSPAKMKFEGLSHHASMDKLMAMMDYDALRADQAEARKAGKLRGLGIASFIELTNPSPFMYGIGGARISAQDGCTVRMDPDGSVVALSGVTEQGQGTEAMLSQVVAEGVGVPPSQVRVITGDTQVTPYGGGTWASRGAGIGGEAALQAAKALRDSILQVAAAMLQAAPDTLDIRDGQVVDAATGAERMPLAELGRIVYFRGDTLPKDLPRELVQTRHFITMDYPFAFTNGVQASYLEVDPETGVVTLLKHWCVEDCGRVINPQLVDEQIRGGIVQGLGGALYEEIHYDADGQLLNGSMADYLVPMAAEMPDMQIAHVETPTGESELGAKGAGEAGTAGAPAAVMNAINDALRPLGAQVTEMPFTPERILRAMGKIEG
SIO_010081: DSHI_RS21085
subclass of: SO_0000673
so part of: DSHI_RS21085
location: 48070..50451
location: region:48070-50451:1
so has part: feature:48070-50451:1:exon

WP_012187479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48070-50451:1:exon

DSHI_RS21090
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21090
old locus tag: Dshi_4203
so part of: sequence
location: 50499..51551
location: region:50499-51551:1
so has part: feature:50499-51551:1:exon
subclass of: SO_0000010

position:50499:1
position: 50499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51551:1
position: 51551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50499-51551:1:exon

DSHI_RS21090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21090
old locus tag: Dshi_4203
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009515214.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: C4-dicarboxylate TRAP transporter substrate-binding protein
translation: MKLTAITTTTALLLGSAAMAQQTITINIGSSHPEANIWVYAMKNTFQPEVNRILSEAGGDYQVNWSENYAGTLYKFTDTREAVMDGIVDIGMVGTVWEGANMPLQNVTYFTPFATEDHRMLIEIFDDLSQSLPELRDSWSENGMVHLSSLITDSYDIYATFPVTSMEDLQNRKLNAPGTSANWLRETGATPVDGALTTYYTNIQTGVTEGTLSFASGILPTRVYEVAPELTRVGIGSMYFGGIAANEDFFNGLPEPVQTALREAAQATSIAHGDYVADLAARALEEMQAAGLTIHELPAEEKAKWVESLPNIIEPWLEQTGEAGKTVLKAYFDALRERGATPARDWDAGL
SIO_010081: DSHI_RS21090
subclass of: SO_0000673
so part of: DSHI_RS21090
location: 50499..51551
location: region:50499-51551:1
so has part: feature:50499-51551:1:exon

WP_012187480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50499-51551:1:exon

DSHI_RS21095
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21095
old locus tag: Dshi_4204
so part of: sequence
location: 51618..52199
location: region:51618-52199:1
so has part: feature:51618-52199:1:exon
subclass of: SO_0000010

position:51618:1
position: 51618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52199:1
position: 52199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51618-52199:1:exon

DSHI_RS21095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21095
old locus tag: Dshi_4204
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803805.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter small permease
translation: MPPPPAPSDDTPELRETGFVPAFADAPYGAVLGSVAAAMSAVGTAAIGALMVLIVADVVGRNFLNMPITGVSEIAARTVVAIVFLQVPAAILQCRLTRADFLIRRIERLSPRAVALMESLFCLAAAIVFALVLWASWPKLLSSWQSAEFFGVQGVWTIVTWPFRAITVGGATIAVLAALYRASVELRRIGAPA
SIO_010081: DSHI_RS21095
subclass of: SO_0000673
so part of: DSHI_RS21095
location: 51618..52199
location: region:51618-52199:1
so has part: feature:51618-52199:1:exon

WP_012187481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51618-52199:1:exon

DSHI_RS21100
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21100
old locus tag: Dshi_4205
so part of: sequence
location: 52196..53524
location: region:52196-53524:1
so has part: feature:52196-53524:1:exon
subclass of: SO_0000010

position:52196:1
position: 52196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53524:1
position: 53524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52196-53524:1:exon

DSHI_RS21100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21100
old locus tag: Dshi_4205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803802.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0008643 - carbohydrate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TRAP transporter large permease
translation: MTTLAFGFVLIGVLVGLVLMGMHIAIALFGVAFVGIWLIRDNIDLAFRMLELTAYSGIADYLFATIPLFVLMGLLVSVSNVGRDTFQVAEELLRRMICGLGVATVAANTIFAAVTGVSIASAAVFTRVAVPEMTRHGYRPAFSAGTVAGSSVLGMLIPPSLLLIIYGILAEVSIGGMFLAGILPGLMLAGGFVVMLIGLTLAFPRFVLADPDAVKARKRDTDLTPMPAREMIAKLTPIVLLVILVLGGLYTGFFTPTEAGGIGAFGALIVALSRRSLDRHKLWQVMKQTGVISVSILLLLVAASFYSRMLAIAGLPNAITGLVTDSGFGPLGFLFFYAVIILLMGMILDSTSILLIMVPIAAPIAQGMGIDLMHFGIVTVLAVEIGLLTPPFGISVFTVHNTLNDPDVSVESIFAATLPFIAVMLLVLVIVALVPTTATLFL
SIO_010081: DSHI_RS21100
subclass of: SO_0000673
so part of: DSHI_RS21100
location: 52196..53524
location: region:52196-53524:1
so has part: feature:52196-53524:1:exon

WP_012187482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52196-53524:1:exon

DSHI_RS21105
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21105
old locus tag: Dshi_4206
so part of: sequence
location: 53586..54509
location: region:53586-54509:1
so has part: feature:53586-54509:1:exon
subclass of: SO_0000010

position:53586:1
position: 53586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54509:1
position: 54509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53586-54509:1:exon

DSHI_RS21105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21105
old locus tag: Dshi_4206
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011455973.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class IV
translation: MDTHTTHDALEDPRNADIRIYINGALKHRSEAMVSVYDSGFMLGDGMWEGLRLYDGVWAFLDDHMDRFYNSCKAVSLDVGMDRAALFDALETTRRANDMHTDVHCRLMLTRGVKVRPFQHPALSRSGPTLVILMEHSKPVDRLHDKGIRLATVPQVRGLPMSQDAKYNSHSKLNCVIACLQAEQAGADEALMLDPHGFVNTTNACNFFIVRKGEVWTSTGDYCMNGVTRQKVIDLCRANGIPVREKNYSLYEAIGADEAFLTGTFGAQTPVASIDGKPIGDGTRPVTARIQALYKALIRDHVAAHST
SIO_010081: DSHI_RS21105
subclass of: SO_0000673
so part of: DSHI_RS21105
location: 53586..54509
location: region:53586-54509:1
so has part: feature:53586-54509:1:exon

WP_012187483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53586-54509:1:exon

DSHI_RS21110
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21110
old locus tag: Dshi_4207
so part of: sequence
location: 54580..55551
location: region:54580-55551:1
so has part: feature:54580-55551:1:exon
subclass of: SO_0000010

position:54580:1
position: 54580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55551:1
position: 55551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54580-55551:1:exon

DSHI_RS21110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21110
old locus tag: Dshi_4207
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013960645.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MLFITNRFPTQSIRTRAGRRFTFDLRNNASSNSVYYCESGRDDAHTELGSATFLERVKASNYQQILLYVHGFSNLPDVVLERARQLQEYCDAAKPGEVLVIALIWPCDDDRGIVEDYWDDQKSADLSGYSFARVLERFLEWRAQDAAAEDATPCLKRINLLAHSMGNRVLRASLATWDRYDLASGVPLIFRNTFMVAADVVNETLHEGHSGELIAHASRNVVVYYASDDLALRASKAANLKNKVASRRLGHTGPEDIRKTPRNVFQVDCDDINTRYDRPMGHSYFLADPETLGAGLVFSHIFRCIEIGRVFPDDMDQRSDRLS
SIO_010081: DSHI_RS21110
subclass of: SO_0000673
so part of: DSHI_RS21110
location: 54580..55551
location: region:54580-55551:1
so has part: feature:54580-55551:1:exon

WP_012187484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54580-55551:1:exon

DSHI_RS21115
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21115
old locus tag: Dshi_4208
so part of: sequence
location: complement(55567..56109)
location: region:55567-56109:-1
so has part: feature:55567-56109:-1:exon
subclass of: SO_0000010

position:55567:-1
position: 55567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56109:-1
position: 56109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55567-56109:-1:exon

DSHI_RS21115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21115
old locus tag: Dshi_4208
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005979050.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRALIAALLLAGTPLAAQETVQRLLELPAHRSLMAKVAEGPLAPFTTDGCSGGLSTSWEVVADLFPNFAGAHAETPPWEACCVTHDRAYHAAGGAREAEASFVARRDADAALRACVIAEGAGRRAALAARYDVPPERIAQAYRAIAESMYTAVRFGGGPCSGLPWRWGYGYPNCLPVSLD
SIO_010081: DSHI_RS21115
subclass of: SO_0000673
so part of: DSHI_RS21115
location: complement(55567..56109)
location: region:55567-56109:-1
so has part: feature:55567-56109:-1:exon

WP_012187485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55567-56109:-1:exon

DSHI_RS21120
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21120
old locus tag: Dshi_4209
so part of: sequence
location: complement(56106..57956)
location: region:56106-57956:-1
so has part: feature:56106-57956:-1:exon
subclass of: SO_0000010

position:56106:-1
position: 56106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57956:-1
position: 57956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56106-57956:-1:exon

DSHI_RS21120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21120
old locus tag: Dshi_4209
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013964053.1
GO function: GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO process: GO:0006629 - lipid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerophosphodiester phosphodiesterase family protein
translation: MIREVLDHYRSAVAMLAPLLTIHVFLRLVFLALILPLIGLLLALTLQFSDQTALTDQDIARFLLTPAGALGALVIGSALVAALILDVAVMTATLRSRRTNALGALREGIGFTLSKGLVLVQVAGGLLLRVLLLSLPFLVVGGGLFLTQLTEFDINYYLTERPPEFTRTVVMIGGVLGLLALLVLERLTGWALVLDMVLFDRQPIGTAFRDSRRLMAGHKLALLRAVALWLGLRLAVAAGISAGLALGLQLTSGAFRQDLTTAALAVMGVMVVALLATTVLNAVSNGALAALLNDLFERAGGGTEHSLGPQEADEGPLGGKVVAGLAVAGVVAVGVIGGAAALSEGIRAETEVAVIGHRGAAGARPENTMASVLKAIEDGADWVEIDVQETSDGAIVVAHDSDFMKAAGNPIKVWDATLADLAEVDIGSWYDPAYAGERVPLLRDVLLAAKDRARVIIELKYYGHDVDLENRVISIVEETDMADQIATMSLSYPAVQKMRDLRPDWRTGVLAATALGDLSGLEGDFLAVSVATASPGLVARAEDAGKQVYAWTVNDALSMSRMISMGVHGLITDEPALARQVIAEHAELPAIARLALWVSESFGVALDRLTGVEVTQ
SIO_010081: DSHI_RS21120
subclass of: SO_0000673
so part of: DSHI_RS21120
location: complement(56106..57956)
location: region:56106-57956:-1
so has part: feature:56106-57956:-1:exon

WP_012187486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56106-57956:-1:exon

DSHI_RS21125
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21125
old locus tag: Dshi_4210
so part of: sequence
location: complement(58042..58482)
location: region:58042-58482:-1
so has part: feature:58042-58482:-1:exon
subclass of: SO_0000010

position:58042:-1
position: 58042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58482:-1
position: 58482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58042-58482:-1:exon

DSHI_RS21125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21125
old locus tag: Dshi_4210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003608677.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MIILDTNVVSELMRPAPSEAVLAWFRDTPPEPLALTAVTVAELRYGIAALPEGRRKAGLAAAVTEMLTRDFPGLVLPFDQAAAEVYGAFAARHRGAGRSPGQADVMIAAIAGAHGAGVATRNLRDFEGLDLRLMDPFAAKPGAGQG
SIO_010081: DSHI_RS21125
subclass of: SO_0000673
so part of: DSHI_RS21125
location: complement(58042..58482)
location: region:58042-58482:-1
so has part: feature:58042-58482:-1:exon

WP_012187487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58042-58482:-1:exon

DSHI_RS21130
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21130
old locus tag: Dshi_4211
so part of: sequence
location: complement(58479..58724)
location: region:58479-58724:-1
so has part: feature:58479-58724:-1:exon
subclass of: SO_0000010

position:58479:-1
position: 58479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58724:-1
position: 58724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58479-58724:-1:exon

DSHI_RS21130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21130
old locus tag: Dshi_4211
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011141676.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTLTVRNIEPELHDFLRQEAARHGRSMEAEVRALLRARMAAEGRSPRDVAESIRTRFAGLDGGLDLPERPRLGAPVDLDA
SIO_010081: DSHI_RS21130
subclass of: SO_0000673
so part of: DSHI_RS21130
location: complement(58479..58724)
location: region:58479-58724:-1
so has part: feature:58479-58724:-1:exon

WP_012187488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58479-58724:-1:exon

DSHI_RS21135
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21135
old locus tag: Dshi_4212
so part of: sequence
location: complement(58898..60001)
location: region:58898-60001:-1
so has part: feature:58898-60001:-1:exon
subclass of: SO_0000010

position:58898:-1
position: 58898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60001:-1
position: 60001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58898-60001:-1:exon

DSHI_RS21135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21135
old locus tag: Dshi_4212
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020043035.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB N-terminal domain-containing protein
translation: MAKRRRLETPSAEDLTKIADEIRAETPLRPAAPIAQVAADAASLASTMPPQARAEAAQDKADAERLRAAQADGLLLAEVPTAEIDADAMVRDRMVLNDEELTELRLSIAENGLRLPIEVFELSEPRDGRRFGLLSGYRRLMAYRGLAELNPKGRYRAIKAVVRPRQAIDKAYAAMVEENEVRAALSHYERGRIAVIAANQGAFTNVEEAVERLFSSASRAKRSKVRSFAIVFEELGDMLAFPEALTERRGLQLATALRAGAERRIREVLEAGAAKTPEEEWAFLDAVISEIEEGPRTAKRGGRPKLSVPAAGWHGRDTLQTSTGVTIRRETDGRGHILRLEGKRVTPDAIETIMLQIRDLLEAEDKL
SIO_010081: DSHI_RS21135
subclass of: SO_0000673
so part of: DSHI_RS21135
location: complement(58898..60001)
location: region:58898-60001:-1
so has part: feature:58898-60001:-1:exon

WP_012187489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58898-60001:-1:exon

DSHI_RS21140
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21140
old locus tag: Dshi_4213
so part of: sequence
location: complement(59994..61394)
location: region:59994-61394:-1
so has part: feature:59994-61394:-1:exon
subclass of: SO_0000010

position:59994:-1
position: 59994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61394:-1
position: 61394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59994-61394:-1:exon

DSHI_RS21140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21140
old locus tag: Dshi_4213
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018001450.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MPPTGKTPLPPYTNLDPEAAARKLSDPIDTARFAKAAAFAAKGRDDLARRGYAPDGQKRLRRFSTWEVCRYLIPVAPAHFRRVLKAHPDLPQGTGEGGSKWFTLEEVLTLRDHFDAEGVATREYRPWRPEGLPAKVIAVANFKGGVGKTSTAAHLAMSAALDGYKVLVVDLDSQGSMTSIMGGKVADEWQTAFPLIAKDYAQAVQAENTVRAAAGQPPLPFDETLTEALKVSPRDVIQSTHWPNIDLIGAQLNLYWAEFQVPVWRMQLRSWPLWDGLTNALDSARLLDEYDIVLLDTPPALGYLTINALAAADILLVPLGASFLEFDSTGRFFDMLYSTFASIEDGENAARRRDGLPEMRFEWDAVRALITRFDANQQTDLANVIQAYFGDFMTTYRQDYTAMVGQAGEQVNGIYEADYRDFNRDTYIRGRETFDRTWAEVKDILLGTWWRDLQMAEAARQETSHG
SIO_010081: DSHI_RS21140
subclass of: SO_0000673
so part of: DSHI_RS21140
location: complement(59994..61394)
location: region:59994-61394:-1
so has part: feature:59994-61394:-1:exon

WP_012187490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59994-61394:-1:exon

DSHI_RS21145
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21145
old locus tag: Dshi_4214
so part of: sequence
location: 61901..63073
location: region:61901-63073:1
so has part: feature:61901-63073:1:exon
subclass of: SO_0000010

position:61901:1
position: 61901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63073:1
position: 63073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61901-63073:1:exon

DSHI_RS21145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21145
old locus tag: Dshi_4214
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013368559.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MAEGPSSTRLTGALKRGSVKKNVAAIHVSGKLTLLQRKLSNVLLLNAYDTLTTRSQHAIDARTLCQMIGYNSNDMETLKTALRGLAETVAEWNMLDAAGREEWGVSSLLSYAKLKDGVCEYGYSAALAEKLHDPKVFALINLDIQRRFTSGHALALYENCFRFVRTGSTGWWSLELFRRLMGVDDSDYYKSFKHLNAKIIKPAVAEVNRTSDILVTPETRKQGRQVAEIRFRIARNPQLSILNIDDGGAVRAGPVYARLRALGVGDRLARQWIAEHGEAAVAAKIAYVDGRDGVRSPVGYLTAALQEGKTPVEEPVSAPEPGSRAEQLRRVQEIIARRSPTQRDADRRLFMSQLDSAEARTDFERHGWMSPLNAKAILAFWQELQPDAFG
SIO_010081: DSHI_RS21145
subclass of: SO_0000673
so part of: DSHI_RS21145
location: 61901..63073
location: region:61901-63073:1
so has part: feature:61901-63073:1:exon

WP_012187491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61901-63073:1:exon

DSHI_RS21150
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21150
old locus tag: Dshi_4215
so part of: sequence
location: 63131..63772
location: region:63131-63772:1
so has part: feature:63131-63772:1:exon
subclass of: SO_0000010

position:63131:1
position: 63131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63772:1
position: 63772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63131-63772:1:exon

DSHI_RS21150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21150
old locus tag: Dshi_4215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007814457.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3047 domain-containing protein
translation: MTYRALIIALALTAATPGLAQQIPFDGSWREQGFLRLFTNDFVQKGGSLDVISDGTVSLLWRAVPEGARDAGKAAWQWAVSEGVGPTDLARKGGDDRNLALYFVFTDPQTAATVDVNSARKLLQADGTRALVYVWGGDATAGTVLPSPYHPGLVTVIKRGPGTGQFSESVDLRADYRRAFGAEAPVLVGLGVSADSDDTDGRIAARVSGLRLD
SIO_010081: DSHI_RS21150
subclass of: SO_0000673
so part of: DSHI_RS21150
location: 63131..63772
location: region:63131-63772:1
so has part: feature:63131-63772:1:exon

WP_157865463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63131-63772:1:exon

DSHI_RS21155
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21155
old locus tag: Dshi_4216
so part of: sequence
location: 63812..65134
location: region:63812-65134:1
so has part: feature:63812-65134:1:exon
subclass of: SO_0000010

position:63812:1
position: 63812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65134:1
position: 65134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63812-65134:1:exon

DSHI_RS21155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21155
old locus tag: Dshi_4216
EC number: 2.7.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013960670.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
GO process: GO:0016310 - phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AarF/ABC1/UbiB kinase family protein
translation: MTKYIHEPRGLAVPNSRAGRMARLGGMAAGVAGNMAFEGGRQLLSGQRPRMEDLLLTPGNAARITAQLAQMRGAAMKVGQLLSLEGGDFLPPELAEILGHLRADAHFMPPKQLDSVLKRHFGPGYRGRFAKFDVRPVAAASIGQVHRAVTKDGRDVALKVQYPGVRESIDSDVRNVGSLLRLSGLVPKEIDLAPLMEEARRQLHEEADYGREAEMLSRFGGLLAGDDRFVVPELYADLTTRDVLGMSFVESVAIEGQGDAPQKMRDRLMESLISLMLRELFEFGLMQTDPNFANYRVQPETGRLVLLDFGATRVFGPDLVGQYRGLMRAGFAGDRGAVNAAMEEIGFLEPETEARHREPILDMVEMAMAPLRAAAPFDFAGTGLARDLRRAGEEFAEGRDFWVIPPMDALYLQRKMGGMFLLGARLRAHVALRPLLEPYL
SIO_010081: DSHI_RS21155
subclass of: SO_0000673
so part of: DSHI_RS21155
location: 63812..65134
location: region:63812-65134:1
so has part: feature:63812-65134:1:exon

WP_012187493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63812-65134:1:exon

DSHI_RS21160
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21160
old locus tag: Dshi_4217
so part of: sequence
location: complement(65138..66145)
location: region:65138-66145:-1
so has part: feature:65138-66145:-1:exon
subclass of: SO_0000010

position:65138:-1
position: 65138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66145:-1
position: 66145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65138-66145:-1:exon

DSHI_RS21160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21160
old locus tag: Dshi_4217
inference: COORDINATES: protein motif:HMM:NF012742.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LacI family DNA-binding transcriptional regulator
translation: MPDGDSRPTLKHVAARAGVSLISASRVMRGAPNVSEALRAKVEAAAADLGYSRNRIAGSLRSQASDLIAVIVPSMSNHVFPPIVDGIDTALRGSRFRPVLGMTGYETSMEETILRDLLSWTPAAVILSGLEHSPGTRALLRRHDGPVIELLDTDAPPIDLSVGVSQAAAGRMMAAHLIDRGYSRIGFVGAWGGRDTRATKRQDALARAVAAAGLAPLAQHIADAPSSLCVGADALRALRRAHPELDAVVFANDDLALGALFACQSDGIAVPDTLALAGFNGLDMCQVITPRLTTIQTPRFEIGQQAGTLLRDRLSGKDTPPPAPLPLHLVAGETT
SIO_010081: DSHI_RS21160
subclass of: SO_0000673
so part of: DSHI_RS21160
location: complement(65138..66145)
location: region:65138-66145:-1
so has part: feature:65138-66145:-1:exon

WP_012187494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65138-66145:-1:exon

DSHI_RS21165
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21165
old locus tag: Dshi_4218
so part of: sequence
location: 66272..67225
location: region:66272-67225:1
so has part: feature:66272-67225:1:exon
subclass of: SO_0000010

position:66272:1
position: 66272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67225:1
position: 67225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66272-67225:1:exon

DSHI_RS21165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21165
old locus tag: Dshi_4218
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008236123.1
GO component: GO:0042597 - periplasmic space [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter substrate binding protein
translation: MKILTVTAMLAASVAMTGTALADDFPQRPINLIAPFNAGGGTDLLLRGFAPHFAEAIGGDAFVSNMAGGSGTVAAGALAGQRPDGYQLGYFSITVSTIQPQIKDVPYDVDSWTPICSVAASPTLLFTTADSPYTTIEEAVAAIEAEPGKLIYGSSGPGAMTHLTTVAGFAGLGVLDKLKHLPFQGSGPAVQAMQAGTIQFFGDTEILMTRGDFRPLMVFNDERLENYPDVPTAAEAGIEPPLNELYLWGGLFAPAGVEPEVVAKLEAACEAAVNSEGFQEFAANTATVIDYRGAEEFEAFFRAQYEANGALIEAAGL
SIO_010081: DSHI_RS21165
subclass of: SO_0000673
so part of: DSHI_RS21165
location: 66272..67225
location: region:66272-67225:1
so has part: feature:66272-67225:1:exon

WP_012187495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66272-67225:1:exon

DSHI_RS21170
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21170
old locus tag: Dshi_4219
so part of: sequence
location: 67292..67747
location: region:67292-67747:1
so has part: feature:67292-67747:1:exon
subclass of: SO_0000010

position:67292:1
position: 67292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67747:1
position: 67747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67292-67747:1:exon

DSHI_RS21170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21170
old locus tag: Dshi_4219
inference: COORDINATES: protein motif:HMM:NF018979.2
GO function: GO:0005215 - transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter TctB family protein
translation: MGRIMSERALVSVALLLVGAGLMLSTFGLQFAELGGAFSPMFFPRIVLMMWVGLALLNVVADVMAQPAPQPIRLATVAAIGLGVLVYVIALPEIGFFFASVPLALGMLWLLEVRSPVALVGIAVGVPGALVVLFNHVLTMPLPASPFLWWI
SIO_010081: DSHI_RS21170
subclass of: SO_0000673
so part of: DSHI_RS21170
location: 67292..67747
location: region:67292-67747:1
so has part: feature:67292-67747:1:exon

WP_012187496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67292-67747:1:exon

DSHI_RS21175
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21175
old locus tag: Dshi_4220
so part of: sequence
location: 67749..69233
location: region:67749-69233:1
so has part: feature:67749-69233:1:exon
subclass of: SO_0000010

position:67749:1
position: 67749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69233:1
position: 69233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67749-69233:1:exon

DSHI_RS21175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21175
old locus tag: Dshi_4220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005029895.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tripartite tricarboxylate transporter permease
translation: MIELLPQAFALLLSPQGLLVLSVGTMLGIVLGALPGIGSTVAVAMILPFTLTMDQAPAILLLLAIYAGSVYGGSISAILINTPGTPQSAATCLDGFPMAQRGEAGKALGWATIASVVGGLTSAVVLIFAAPQLAAFALNFGPIETFALILLGLTCIVSVSEGSLVKGLMAGMLGIFLSTVGGDPITGEARFTFGQFQLIAGFNLLAVVIGVFALSEVLIRASSGPDSTGVLVDFKGIVLPRWAEWKGRLRGLAKSVAIGNGVGILPGTGAATAAFISYAEARRSAPTRANFGKGEPDGLIASESANNAVTGGALVPTMALGIPGDAITAVMLATLTLHGVTPGIRLMQDNPVLMASIFAGFFIINLMLLPLGMLVSKLAAPLLRMREAYMLIVITLLCTVGVFFVRGNPFDLLVMAGAGIVGFVLRRQGYPMAPLVIGMVLGPTLELSLRQGLIITDGNFGAFFTGHPIALGLTIAAAGMLSLPLIRALRSKGA
SIO_010081: DSHI_RS21175
subclass of: SO_0000673
so part of: DSHI_RS21175
location: 67749..69233
location: region:67749-69233:1
so has part: feature:67749-69233:1:exon

WP_012187497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67749-69233:1:exon

DSHI_RS21180
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21180
old locus tag: Dshi_4221
so part of: sequence
location: 69235..70116
location: region:69235-70116:1
so has part: feature:69235-70116:1:exon
subclass of: SO_0000010

position:69235:1
position: 69235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70116:1
position: 70116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69235-70116:1:exon

DSHI_RS21180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21180
old locus tag: Dshi_4221
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008192297.1
GO function: GO:0050661 - NADP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-binding domain-containing protein
translation: MSDVAIIGLGSMGYGMAQSLLRAGLRVYGADIAPEPMARFRAEGGLAARPEAVDILVIAVLNAAQTEAVLFGAEGWISTLRKGGVVIACATVPPRFARDMAARCAEAGVQYLDAPISGGAAKAAQGRLSIMASGGAEAFAAAAPALDAMAETVFELGDAPGAGSAMKAINQMLAGTHIAAMAEAVTFGMTQGVDPAKTVEVISRCAGTSWMFENRAPHIVEGDYTPRSSVNIWPKDLGIVLDIAAEAKFAAPLTAAALQQFMAAAGSGLGGEDDAAVAKVYARNAGLTLPGEG
SIO_010081: DSHI_RS21180
subclass of: SO_0000673
so part of: DSHI_RS21180
location: 69235..70116
location: region:69235-70116:1
so has part: feature:69235-70116:1:exon

WP_012187498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69235-70116:1:exon

DSHI_RS21185
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21185
old locus tag: Dshi_4222
so part of: sequence
location: 70201..70617
location: region:70201-70617:1
so has part: feature:70201-70617:1:exon
subclass of: SO_0000010

position:70201:1
position: 70201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70617:1
position: 70617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70201-70617:1:exon

DSHI_RS21185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21185
old locus tag: Dshi_4222
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLHAVQTPAELRPARAPERPVSALSETGRARLAALREAARVARARPYRSLEATCLSERGRTDPYESLVECLPEAVARPLVIYRGAEDSLSFDEAWILTMLERIDSTDWDSLHFLIARRVCRPFRVAVRVLLGACQDG
SIO_010081: DSHI_RS21185
subclass of: SO_0000673
so part of: DSHI_RS21185
location: 70201..70617
location: region:70201-70617:1
so has part: feature:70201-70617:1:exon

WP_012187499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70201-70617:1:exon

DSHI_RS21190
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21190
old locus tag: Dshi_4223
so part of: sequence
location: 70690..71160
location: region:70690-71160:1
so has part: feature:70690-71160:1:exon
subclass of: SO_0000010

position:70690:1
position: 70690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71160:1
position: 71160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70690-71160:1:exon

DSHI_RS21190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21190
old locus tag: Dshi_4223
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008232096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA starvation/stationary phase protection protein
translation: MTQTAVALSQDAQAAIADALNQSVAETTVTTMMAQNFHWNVTGMAFGPLHQLFQDIYEDHFQAQDDLAERIKAIDAHAEGTLAGMLKRSKVTEHDGHADAKTMIETMKVAQETLAATLAGCGELAAEHGDTLTEDLCIARGQTHEKFAWFLRAHLR
SIO_010081: DSHI_RS21190
subclass of: SO_0000673
so part of: DSHI_RS21190
location: 70690..71160
location: region:70690-71160:1
so has part: feature:70690-71160:1:exon

WP_012187500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70690-71160:1:exon

DSHI_RS21195
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21195
old locus tag: Dshi_4224
so part of: sequence
location: complement(71161..71427)
location: region:71161-71427:-1
so has part: feature:71161-71427:-1:exon
subclass of: SO_0000010

position:71161:-1
position: 71161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71427:-1
position: 71427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71161-71427:-1:exon

DSHI_RS21195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21195
old locus tag: Dshi_4224
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011456394.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1289 domain-containing protein
translation: MAKTPSPCISVCKFKRQGHCIGCSMTKAQKSLYKGLKKESHKQAFVDMLVKQQAALGKYRHWTAAYMRKCLKKKAKPVPAVRDAAKAA
SIO_010081: DSHI_RS21195
subclass of: SO_0000673
so part of: DSHI_RS21195
location: complement(71161..71427)
location: region:71161-71427:-1
so has part: feature:71161-71427:-1:exon

WP_012187501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71161-71427:-1:exon

DSHI_RS22125
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22125
old locus tag: Dshi_4225
so part of: sequence
location: complement(71437..71592)
location: region:71437-71592:-1
so has part: feature:71437-71592:-1:exon
subclass of: SO_0000010

position:71437:-1
position: 71437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71592:-1
position: 71592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71437-71592:-1:exon

DSHI_RS22125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22125
old locus tag: Dshi_4225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014537955.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hemin uptake protein HemP
translation: MPSQTITPDKDTVPVFDARDLLGPNLRAFLRLDDQTYTLRMTRNGKLILTK
SIO_010081: DSHI_RS22125
subclass of: SO_0000673
so part of: DSHI_RS22125
location: complement(71437..71592)
location: region:71437-71592:-1
so has part: feature:71437-71592:-1:exon

WP_012187502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71437-71592:-1:exon

DSHI_RS21200
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21200
old locus tag: Dshi_4226
so part of: sequence
location: 71714..72295
location: region:71714-72295:1
so has part: feature:71714-72295:1:exon
subclass of: SO_0000010

position:71714:1
position: 71714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72295:1
position: 72295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71714-72295:1:exon

DSHI_RS21200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21200
old locus tag: Dshi_4226
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011047259.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhodanese-like domain-containing protein
translation: MVLRVLLIFLLCLPGPVLAGSSAEAMAKRPELFDPATGYRIDRQRAPTPEDIPPPARLVDTEEAAALIAAGALVLDVYGASQSRFDELDGTWLVSQQRLSLPGALWLPETGRGWLEPVLQTYLVDNLARATGGDMARPIVVYCIADCWMSWNAAQRIAALGYEAVYWYRLGTDGWLDAGRALFPVDPVPVNVE
SIO_010081: DSHI_RS21200
subclass of: SO_0000673
so part of: DSHI_RS21200
location: 71714..72295
location: region:71714-72295:1
so has part: feature:71714-72295:1:exon

WP_012187503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71714-72295:1:exon