Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI03, complete sequence.
type: Entry
definition: Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI03, complete sequence.
sequence version: NC_009957.1
sequence date: 2023-05-02
sequence: sequence
division: CON
label: NC_009957.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02598387
keyword: RefSeq
source: Dinoroseobacter shibae DFL 12 = DSM 16493
organism: Dinoroseobacter shibae DFL 12 = DSM 16493
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Dinoroseobacter.
reference: 1
reference: 2
reference: 3
reference: 4
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP000833.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4002768\nSource DNA and bacteria available from Irene Wagner-Dobler\n(Irene.Wagner-Doebler@helmholtz-hzi.de)\nContacts: Irene Wagner-Dobler\n(Irene.Wagner-Doebler@helmholtz-hzi.de)\n Paul Richardson (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/02/2023 02:01:02\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,328\nCDSs (total) :: 4,274\nGenes (coding) :: 4,219\nCDSs (with protein) :: 4,219\nGenes (RNA) :: 54\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 44\nncRNAs :: 4\nPseudo Genes (total) :: 55\nCDSs (without protein) :: 55\nPseudo Genes (ambiguous residues) :: 0 of 55\nPseudo Genes (frameshifted) :: 20 of 55…

sequence
subclass of: SO_0000155
sequence length: 126304
topology: circular
so has quality: SO_0000988
location: 1..126304
location: region:1-126304:1
RO_0002162: 398580

NC_009957
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02598387
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of chromosome of Dinoroseobacter shibae DFL 12
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Thompson, L.S.
author: Brettin, T.
author: Bruce, D.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Kim, E.
author: Richardson, P.
journal: Unpublished

2
title: The Roseobacter - microalgae symbiosis: Adaptation to viral pressure, horizontal gene transfer, and ability to synthesize vitamine B12 under all conditions are revealed by the genome sequence
author: Liesegang, H.
author: Wagner-Doebler, I.
journal: Unpublished

3
title: Direct Submission
author: Liesegang, H.
author: Wagner-Doebler, I.
journal: Submitted (06-JUL-2009) HZI-Braunschweig, Braunschweig, Germany
comments: Protein update by submitter

4
title: Direct Submission
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Thompson, L.S.
author: Brettin, T.
author: Bruce, D.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Kim, E.
author: Richardson, P.
journal: Submitted (21-SEP-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126304:1
position: 126304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-126304:1:source
so part of: sequence
organism: Dinoroseobacter shibae DFL 12 = DSM 16493
mol type: genomic DNA
strain: DFL 12
type material: type strain of Dinoroseobacter shibae
plasmid: pDSHI03

398580
type: Taxonomy
SIO_000068: taxonomy

DSHI_RS19805
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19805
old locus tag: Dshi_3931
so part of: sequence
location: complement(12..776)
location: region:12-776:-1
so has part: feature:12-776:-1:exon
subclass of: SO_0000010

position:12:-1
position: 12
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776:-1
position: 776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12-776:-1:exon

DSHI_RS19805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19805
old locus tag: Dshi_3931
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009808021.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutaredoxin
translation: MPRDTDSKSAQLYRMVMPGHVCPYGLKSKDLLERQGFEVEDHPLDTREDTDAFMEKHGVETTPQTFIGDERIGGYDDLRVFFDIDPPEEEQSDTTYQPVIAIFSVAALLALGLSWHQYGSVLTLRGFEWFISLSMTILAIQKLQDVEGFSTMFLNYDLLARKWVRYGKVYPFGEALAGVLMTAGALLWLSAPVALFIGTVGAVSVFKAVYIDKRELKCACVGGDSSVPLGFISLTENLMMIFMGIWMPVRAIWF
SIO_010081: DSHI_RS19805
subclass of: SO_0000673
so part of: DSHI_RS19805
location: complement(12..776)
location: region:12-776:-1
so has part: feature:12-776:-1:exon

WP_012187037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12-776:-1:exon

DSHI_RS19810
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19810
old locus tag: Dshi_3932
so part of: sequence
location: complement(789..1625)
location: region:789-1625:-1
so has part: feature:789-1625:-1:exon
subclass of: SO_0000010

position:789:-1
position: 789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1625:-1
position: 1625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789-1625:-1:exon

DSHI_RS19810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19810
old locus tag: Dshi_3932
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018303301.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF305 domain-containing protein
translation: MHYSRFFMMIGTSTVVMFVLMYLNTYLWGHIFFSETRLYMAILMGATMAVIMLAYMLSMYQNTKANIAIFVGAIVLFAASLWLVRGQFTVQDRSYMRAMIPHHSIAIMTSTRAEITDPRVRGLADDIIYAQDKEIAEMRYLIADIGANGEASATRSETPAQVVDAQQALQTEVVSKVDPEFLTEDEIAAVFPNGGNCRFAYTSDSPAVLVTGETGEGSAAAMKISGDLVRLNAQGENAFSEGPLSAEIAETNGDLTDLIVSAGTDYEAGFRGQLTCSG
SIO_010081: DSHI_RS19810
subclass of: SO_0000673
so part of: DSHI_RS19810
location: complement(789..1625)
location: region:789-1625:-1
so has part: feature:789-1625:-1:exon

WP_012187184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:789-1625:-1:exon

DSHI_RS23025
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS23025
old locus tag: Dshi_3933
so part of: sequence
location: 1805..2386
location: region:1805-2386:1
so has part: feature:1805-2386:1:exon
subclass of: SO_0000010

position:1805:1
position: 1805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2386:1
position: 2386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1805-2386:1:exon

DSHI_RS23025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS23025
old locus tag: Dshi_3933
EC number: 2.3.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017927528.1
GO function: GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0071972 - peptidoglycan L,D-transpeptidase activity [Evidence IEA]
GO process: GO:0018104 - peptidoglycan-protein cross-linking [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L,D-transpeptidase
translation: MQNFTRRELICAGAMGCFLPTTAWAHKVKLPERFEPQLVNTRRGDWVKGDVHVVPDDFFLYFMLEDGMAIRYGVGVGRKGLYEPGEFTVARKAKWPWWRPTNAMIRREPRKYAKYKDGLKGGPNNPLGARALYLYDAEGRDTYLRIHGTNAPETIGSAVSNGCARLTNEHVKDLYERVEIGARVFLYPKVTTA
SIO_010081: DSHI_RS23025
subclass of: SO_0000673
so part of: DSHI_RS23025
location: 1805..2386
location: region:1805-2386:1
so has part: feature:1805-2386:1:exon

WP_012187183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1805-2386:1:exon

DSHI_RS19820
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19820
old locus tag: Dshi_3934
so part of: sequence
location: 2512..3774
location: region:2512-3774:1
so has part: feature:2512-3774:1:exon
subclass of: SO_0000010

position:2512:1
position: 2512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3774:1
position: 3774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2512-3774:1:exon

DSHI_RS19820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19820
old locus tag: Dshi_3934
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008327307.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multicopper oxidase family protein
translation: MTVALAGTRLPAATHELILAPQSIKAHLAGYDVSMLGFNGGLPGPEVRMRQGQTARITLDNRLEEGALVHWHGLRVPNRMDGVNVLTQDVVIPGDSYRYQFGVPDAGTYWYHSHYLSYDQVSRGLFGAFIVEEQNAPAVDHDIVVQFFDVLLDQSGQYDEAFNPAHFATEGRIGNTVTALVFNGTGKTVKRGDRLRLRLINPSIDRVYRVGLDGLIGKIVALDGMPLAHPRTLEPILLAPGQRCDVIGDATGPIRFDDSFGEQTLSLGEIAVSGSREPAKAPITALPANRMPAPKDPGQTAELVLQGGAGSASHNGTGTWALNDVSGLPRRPFLSAAQGTTARISIRNETGFPHVMHLHGHHFWELDAAGEAGPYRDSTYLDTGETRDILVVLDNPGSWMLHCHMLSHQADGMATWIRVG
SIO_010081: DSHI_RS19820
subclass of: SO_0000673
so part of: DSHI_RS19820
location: 2512..3774
location: region:2512-3774:1
so has part: feature:2512-3774:1:exon

WP_007803424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2512-3774:1:exon

DSHI_RS19825
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19825
old locus tag: Dshi_3935
so part of: sequence
location: 3888..4400
location: region:3888-4400:1
so has part: feature:3888-4400:1:exon
subclass of: SO_0000010

position:3888:1
position: 3888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4400:1
position: 4400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3888-4400:1:exon

DSHI_RS19825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19825
old locus tag: Dshi_3935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007254433.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: disulfide bond formation protein B
translation: MTLTPKSLGMTAAAGSAALLLGAFVFQALGYAPCAMCIWQRYPHAIAIGMGALLLFALPILPILIIGALSVLSTSALGVFHTGVERGWWEGPTSCTGSGLDVSQMSVSELLPSASSNTSNLVLCSEVVWEFLTLSMASWNAILSGVLACLWLVAIARHQKVRWHGVADVS
SIO_010081: DSHI_RS19825
subclass of: SO_0000673
so part of: DSHI_RS19825
location: 3888..4400
location: region:3888-4400:1
so has part: feature:3888-4400:1:exon

WP_012187181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3888-4400:1:exon

DSHI_RS19830
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19830
old locus tag: Dshi_3936
so part of: sequence
location: 4443..5108
location: region:4443-5108:1
so has part: feature:4443-5108:1:exon
subclass of: SO_0000010

position:4443:1
position: 4443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5108:1
position: 5108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4443-5108:1:exon

DSHI_RS19830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19830
old locus tag: Dshi_3936
EC number: 2.3.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009503854.1
GO function: GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0071972 - peptidoglycan L,D-transpeptidase activity [Evidence IEA]
GO process: GO:0018104 - peptidoglycan-protein cross-linking [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L,D-transpeptidase
translation: MVTRRHFLALSGSLFSASLSSPAFAKTWPSTAEKAAWDAQITPANYDPATTNPWGLHPRLLPQRVLANDGLRPGDIHVDAIARYLYHIEEGGTAMRYGVAIAKGDLYEPGTYTIRRKVEWPHWTPTQSMIERDPEAYERFADGMEPGPNNALGSRALYLFVGDRDTYLRIHGTPSPRSIGGRASSGCVRMVMAHINDLYPNVAVGSTAFLYSAEDSVTARS
SIO_010081: DSHI_RS19830
subclass of: SO_0000673
so part of: DSHI_RS19830
location: 4443..5108
location: region:4443-5108:1
so has part: feature:4443-5108:1:exon

WP_012187180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4443-5108:1:exon

DSHI_RS19835
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19835
old locus tag: Dshi_3937
so part of: sequence
location: complement(5185..5796)
location: region:5185-5796:-1
so has part: feature:5185-5796:-1:exon
subclass of: SO_0000010

position:5185:-1
position: 5185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5796:-1
position: 5796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5185-5796:-1:exon

DSHI_RS19835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19835
old locus tag: Dshi_3937
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803430.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFSVLTLVILAGCGAGNDMRPDASAEVISSASYRHDGPAALTLYTMINNRSGAGAHSSVMINGSQRVIFDPAGTVRLSAVPERGDVLYGITPQVADFYARAHARETYHVVIQEIDVSPEVAEQALRLAIASGPAASGFCSASTSAVLRQLPGFESIGRTFFPKRLMADFGKLPGVRTTKLFENDEDDKSVAIAQFESSLATQP
SIO_010081: DSHI_RS19835
subclass of: SO_0000673
so part of: DSHI_RS19835
location: complement(5185..5796)
location: region:5185-5796:-1
so has part: feature:5185-5796:-1:exon

WP_007803430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5185-5796:-1:exon

DSHI_RS19840
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19840
old locus tag: Dshi_3938
so part of: sequence
location: 6140..6748
location: region:6140-6748:1
so has part: feature:6140-6748:1:exon
subclass of: SO_0000010

position:6140:1
position: 6140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6748:1
position: 6748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6140-6748:1:exon

DSHI_RS19840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19840
old locus tag: Dshi_3938
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018065800.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EF-hand domain-containing protein
translation: MKRNTLLAAMTLAATALGGAAFADANHGRGGQFGAQSGPGMMQNGGPGMMGNMGGMMDMMKRMHGNMMGAGMMGAGMGSGMMSPGMAGGMMQMFDTDGDGTTTPEEMRTQLQAKLSEFDSDGDGSLSITEFEALHSAMIREMMVDRFQHLDADGDGAVTPEEMAAPADRMERMQMMRSNMADAPARPGNGQGMGNGSMMQDN
SIO_010081: DSHI_RS19840
subclass of: SO_0000673
so part of: DSHI_RS19840
location: 6140..6748
location: region:6140-6748:1
so has part: feature:6140-6748:1:exon

WP_012187178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6140-6748:1:exon

DSHI_RS19845
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19845
old locus tag: Dshi_3939
so part of: sequence
location: 6889..7275
location: region:6889-7275:1
so has part: feature:6889-7275:1:exon
subclass of: SO_0000010

position:6889:1
position: 6889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7275:1
position: 7275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6889-7275:1:exon

DSHI_RS19845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19845
old locus tag: Dshi_3939
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803435.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF302 domain-containing protein
translation: MAYTYDRVLKDTKIDDAEMRVRDALADKGFGVLTEIDVKATMKKKLDADMPPYRILGACNPGMAHKAIEIEPRIGAMLPCNVILRQLDGDTEVSAVDPVASMQAVQNQDLDAVAGEVRDLLRDALDTA
SIO_010081: DSHI_RS19845
subclass of: SO_0000673
so part of: DSHI_RS19845
location: 6889..7275
location: region:6889-7275:1
so has part: feature:6889-7275:1:exon

WP_007803435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6889-7275:1:exon

DSHI_RS19850
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: lgt
locus tag: DSHI_RS19850
old locus tag: Dshi_3940
so part of: sequence
location: 7381..8301
location: region:7381-8301:1
so has part: feature:7381-8301:1:exon
subclass of: SO_0000010

position:7381:1
position: 7381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8301:1
position: 8301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7381-8301:1:exon

DSHI_RS19850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: lgt
locus tag: DSHI_RS19850
old locus tag: Dshi_3940
EC number: 2.5.1.145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803438.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO process: GO:0009249 - protein lipoylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prolipoprotein diacylglyceryl transferase
translation: MLPAGLPFPDIGTDLFSFDIGGVTFALRWYALAYIFGILIGWRICSSAISRPALWTSAGPPLDRTQIEDLLTWIIIGVIAGGRLGFVLFYQPAYYLANPLEILMVWQGGMSFHGGFAGVVIAALLFCLRQNASLLSTGDLLALATPPGLFLGRLANFTNNELWGRPTDVPWAVIFPGEVAQACPGVSGLCARHPSQLYEAVLEGLILGILLIYLAWGRGWLKMPGALAGVFLTGYGLARSFVEMFRQPDQQFVTADNPIGHALHFGEWGLTMGQLLSMPMALVGLALIVFARRERGRTAPPRRAAM
SIO_010081: DSHI_RS19850
subclass of: SO_0000673
so part of: DSHI_RS19850
location: 7381..8301
location: region:7381-8301:1
so has part: feature:7381-8301:1:exon

WP_007803438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7381-8301:1:exon

DSHI_RS19855
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19855
old locus tag: Dshi_3941
so part of: sequence
location: 8437..10725
location: region:8437-10725:1
so has part: feature:8437-10725:1:exon
subclass of: SO_0000010

position:8437:1
position: 8437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10725:1
position: 10725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8437-10725:1:exon

DSHI_RS19855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19855
old locus tag: Dshi_3941
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011242142.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper-translocating P-type ATPase
translation: MHPEVRQDEPGNCPKCGMHLVPESELEVHSAHDHHEHHAGATPADGRYDLVPTGHDGPIFTCPMHPQVRQPDPGACPICGMGLELESGVPGDEGPNPELVDFTRRFWVGTVLTIPLLVLTMGPFVGFPAVRTFFGESTTQWIELILATPVVLWCGWPFLERGWISFRTLNLNMFSLIGMGVLAAWLFSVVAVLAPDIFPDGFRDSEGHVGVYFEAAAVIVTLVLLGQVMELRAREGTGKAIRALLDMAAKTARVIRDDGSEEEIPLEDVQVGDRLRVRPGDKVPVDGVVLDGRSSVDESMISGEPVPVEKTEGDPLTGATINGTGSLVMEATRVGSDTMLAQIVEMVSNAQRSRAPIQKYADKVAGYFVPAVIGIAVLSFIAWAIWGPAPALSYALISAVAVLIIACPCALGLATPMSIMTATGRGAQAGVLIKNAEALERFEKVDTLIVDKTGTLTEGKPRLVDVLPQPGHDEAEVLRLAASLERGSEHPLAEAIVRGAEERDVKMDEARDFEAVTGKGVKGVVDGKAVALGNLAMIRELGLEAGALTAKANARRDEGETVMFVVLDGEIAGLVAVADPVKETTPEAIEDLHELGFRVIMATGDNERTAKAIGTRLGIDEIRADVLPEDKARIILELQEAGHKVAMAGDGVNDAPALAQADVGIAMGTGADVAIESAGVTLVKGNLDGIVRARRLARATMRNIRQNLFFALIYNASGVPVAAGVLFPFFGILISPMFAAFAMSASSISVVLNSLRLRGVRI
SIO_010081: DSHI_RS19855
subclass of: SO_0000673
so part of: DSHI_RS19855
location: 8437..10725
location: region:8437-10725:1
so has part: feature:8437-10725:1:exon

WP_222864283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8437-10725:1:exon

DSHI_RS19860
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19860
old locus tag: Dshi_3942
so part of: sequence
location: 10774..12111
location: region:10774-12111:1
so has part: feature:10774-12111:1:exon
subclass of: SO_0000010

position:10774:1
position: 10774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12111:1
position: 12111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10774-12111:1:exon

DSHI_RS19860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19860
old locus tag: Dshi_3942
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803442.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: APC family permease
translation: MQSEKETYRENSISLGGAVAMGTGVMIGAGIFALTGQIAQLAGPLFPLAFIAGAVVTSFSAYSYIRMSNKWPSSGGIAMILQKCYGPGAIAGGAALLMALSMVIAESLVARTFATYVLRPFDIEGGPLVPALAVAVIVFAFLVNMAGNRSVGLFSLIMAAIKIGGIALFGIAALWSSGFAFAAASETSQSYGLTGFIASTALAILAFKGFTTITNSGAEITEPNRNVGRAIMFSIGICVVVYLLVAYGVGSSLTIEEIISARDYSLAQAAQPALGQTGFILTVILAAVATASGVLASVFAVSRMLAMLTDMEMIPHSHFGMPGPIQRHTLVYTVVIAATLAVLFDLGRIASLGAFFYLVMDMIIHWGVFRYRRADVGAFGIVLLTALALDAIVLAAFTVMKLQSDPMIVLYAAVGMIAVFAFERVYLSQWVAPQVAPAPAHAHGD
SIO_010081: DSHI_RS19860
subclass of: SO_0000673
so part of: DSHI_RS19860
location: 10774..12111
location: region:10774-12111:1
so has part: feature:10774-12111:1:exon

WP_007803442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10774-12111:1:exon

DSHI_RS19865
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19865
old locus tag: Dshi_3943
so part of: sequence
location: complement(12119..12763)
location: region:12119-12763:-1
so has part: feature:12119-12763:-1:exon
subclass of: SO_0000010

position:12119:-1
position: 12119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12763:-1
position: 12763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12119-12763:-1:exon

DSHI_RS19865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19865
old locus tag: Dshi_3943
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803445.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDRFFSISMPAAQFVRNVLLFSFAALLPVLLFYVLLAPGFAPALAAGGPALMRLLRQVATNGLPVVFAVNYVSFFLFAMTKQPKAGSRDTAFFVLVDVLLRALLFPGLHVLIYVLSADWFGSFGGNRSTALAVVSPTLARSAFFENISGVYLYATMISALPLYVSAFGRSEFLGPVVRRLPMNTGVMLLALAAFALSVGLITIGAQGIASLQAR
SIO_010081: DSHI_RS19865
subclass of: SO_0000673
so part of: DSHI_RS19865
location: complement(12119..12763)
location: region:12119-12763:-1
so has part: feature:12119-12763:-1:exon

WP_007803445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12119-12763:-1:exon

DSHI_RS22445
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22445
pseudo: true
so part of: sequence
location: 12873..>12992
location: region:12873-12992:1
so has part: feature:12873-12992:1:exon
subclass of: SO_0000010

position:12873:1
position: 12873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12992:1
position: 12992
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12873-12992:1:exon

DSHI_RS22445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611948.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: DSHI_RS22445
subclass of: SO_0000673
so part of: DSHI_RS22445
location: 12873..>12992
location: region:12873-12992:1
so has part: feature:12873-12992:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12873-12992:1:exon

DSHI_RS19870
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19870
old locus tag: Dshi_3944
so part of: sequence
location: 12980..13702
location: region:12980-13702:1
so has part: feature:12980-13702:1:exon
subclass of: SO_0000010

position:12980:1
position: 12980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13702:1
position: 13702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12980-13702:1:exon

DSHI_RS19870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19870
old locus tag: Dshi_3944
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803446.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0017004 - cytochrome complex assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c biogenesis protein CcdA
translation: MARALTAALLAGTISFLSPCVLPLVPGYVSYVTGRTAAEGGVVGASPSRAVWLSLCFVLGFSTIFMGLGASATAMGQALLRWRYELNLVGGGIIIFFGLFMIGAARVSVMERDFRFNLNIPGGQPAASYVLGLAFGFGWTPCIGPILGAILTASAASATMGEGIMLLAVYSAGLGIPFLIVAGFTDQIAGRLRAIGRVGRRLHQLAGIVMILMGLAMMTGQLSALSYWMLDVFPVLGRIG
SIO_010081: DSHI_RS19870
subclass of: SO_0000673
so part of: DSHI_RS19870
location: 12980..13702
location: region:12980-13702:1
so has part: feature:12980-13702:1:exon

WP_007803446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12980-13702:1:exon

DSHI_RS19875
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19875
old locus tag: Dshi_3945
so part of: sequence
location: 13896..14561
location: region:13896-14561:1
so has part: feature:13896-14561:1:exon
subclass of: SO_0000010

position:13896:1
position: 13896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14561:1
position: 14561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13896-14561:1:exon

DSHI_RS19875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19875
old locus tag: Dshi_3945
EC number: 2.3.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009503854.1
GO function: GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0071972 - peptidoglycan L,D-transpeptidase activity [Evidence IEA]
GO process: GO:0018104 - peptidoglycan-protein cross-linking [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L,D-transpeptidase
translation: MLTRRHFIQTTTALFSASISSPLLADTWPTDAQKAAWDAQVTPPGYDPATSNPWGLHPRFLPQRVLAKDGLVPGDIHVDAVARYLYHIEEGGTAMRYGVAIARGKLYEPGTYTIKRKVRWPHWQPTQNMIDRDPELYADIADGMEPGPENALGSRALYLFVGDRDTYLRIHGTPYPRSIGGRASSGCVRMVMAHINDLYPNVEIGSTAFLYSAEDSVTPRS
SIO_010081: DSHI_RS19875
subclass of: SO_0000673
so part of: DSHI_RS19875
location: 13896..14561
location: region:13896-14561:1
so has part: feature:13896-14561:1:exon

WP_007803448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13896-14561:1:exon

DSHI_RS21995
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21995
old locus tag: Dshi_3946
so part of: sequence
location: complement(14609..14881)
location: region:14609-14881:-1
so has part: feature:14609-14881:-1:exon
subclass of: SO_0000010

position:14609:-1
position: 14609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14881:-1
position: 14881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14609-14881:-1:exon

DSHI_RS21995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21995
old locus tag: Dshi_3946
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005613342.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKRNAPIIAATLVLAGCAVPTLDDGGARNEVGSVPEAVIALAAPGQDLTTARLRPEDGCYWYEHSGPVENTLVPLRSAGGNPICTSRQS
SIO_010081: DSHI_RS21995
subclass of: SO_0000673
so part of: DSHI_RS21995
location: complement(14609..14881)
location: region:14609-14881:-1
so has part: feature:14609-14881:-1:exon

WP_012187176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14609-14881:-1:exon

DSHI_RS19880
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19880
old locus tag: Dshi_3947
so part of: sequence
location: 15074..17428
location: region:15074-17428:1
so has part: feature:15074-17428:1:exon
subclass of: SO_0000010

position:15074:1
position: 15074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17428:1
position: 17428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15074-17428:1:exon

DSHI_RS19880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19880
old locus tag: Dshi_3947
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation-translocating P-type ATPase
translation: MSSDGNRNDHGHPGDQEHSDPRGNSCCDASKDVASTAPAPSGGRSFQVSGLDCAEEVAILNRVVGPKVGGTEHLAFDVINGRMTILDSAERIPDDEVTQLVATTGMSAKPWDADNAAEDQAAHLARQKRFTSLSGGFWAAGFLFHIVETGMGGALGLFAGHGEVPMPMVEAGIFAVAILFGVWLVAPKAWSSARRLSPDMNLLMVVAVAGAIGLGEFFEAATVAFFFSLSLYLESWSVGRARNAVSALLDLAPPTARVLYDDGSESDVPAAAVAVNARFIVRGGDRIPLDGEVVDGAGAVDQAPITGESALVPKEPGDEVYAGTINGEGTLTVRATKAASDTVLAKIIRMVGDAHARRAPVEQWVAKFARIYTPIVMALAIAIALVPPLLLGGAWDYWFYNALVLLVIACPCALVISTPVSIVAALTASARAGVLIKGGAYVEAPGRTTALAMDKTGTITMGEPEVAAVHPLVGVSARDLMALAASLEARSSHPLARAILSRAEADGVSVSAAEDTRTVPGRGLEGRADGRAIWLGSDRFAEEKGFGNAIPADLRDRIEGAGSTLVAVGDETGVTGVLELRDRIRPDAKGIVARLHAQGVKTIVMLTGDNERTARAVAAEVGIDEVRAELLPEDKVTAIEELVESHDMVAMIGDGVNDAPAMARAHYAIAMGAVGSDAAIETADIALMTDDIGKVPWLIGHSRRAMTIIHQNIGISLATKALFVGLTAFGMASMWGAIAADVGVSLLVVANALRLLNGHQVEAGPSGGEPVGEQMAKGALAHGH
SIO_010081: DSHI_RS19880
subclass of: SO_0000673
so part of: DSHI_RS19880
location: 15074..17428
location: region:15074-17428:1
so has part: feature:15074-17428:1:exon

WP_207287124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15074-17428:1:exon

DSHI_RS19885
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19885
old locus tag: Dshi_3948
so part of: sequence
location: complement(17422..17697)
location: region:17422-17697:-1
so has part: feature:17422-17697:-1:exon
subclass of: SO_0000010

position:17422:-1
position: 17422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17697:-1
position: 17697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17422-17697:-1:exon

DSHI_RS19885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19885
old locus tag: Dshi_3948
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803452.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNIMRVLLATLASALLLSGPVAATPAKEAPWLPEAAAYRLTLFLGNLEPLPWDDIETAWTEPYRGSEFSVGALAWLDRKSDIELPKPPDQ
SIO_010081: DSHI_RS19885
subclass of: SO_0000673
so part of: DSHI_RS19885
location: complement(17422..17697)
location: region:17422-17697:-1
so has part: feature:17422-17697:-1:exon

WP_012187175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17422-17697:-1:exon

DSHI_RS19890
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: mntR
locus tag: DSHI_RS19890
old locus tag: Dshi_3949
so part of: sequence
location: 17795..18253
location: region:17795-18253:1
so has part: feature:17795-18253:1:exon
subclass of: SO_0000010

position:17795:1
position: 17795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18253:1
position: 18253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17795-18253:1:exon

DSHI_RS19890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: mntR
locus tag: DSHI_RS19890
old locus tag: Dshi_3949
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008327326.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0046914 - transition metal ion binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: manganese-binding transcriptional regulator MntR
translation: MTKLQSQGREPFEAVDRAPEAQADGFATVRQAHESEMAEDYVELIAELIETRGEARPVEIAERLGVKPPTVTKNISRLKAAGLVRREPYRAIFLTDAGQDLAEICRRRHRVVVAFLLSLGIDEETAERDAEGIEHHVSGTTLEAFERRLNQK
SIO_010081: DSHI_RS19890
subclass of: SO_0000673
so part of: DSHI_RS19890
location: 17795..18253
location: region:17795-18253:1
so has part: feature:17795-18253:1:exon

WP_008327326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17795-18253:1:exon

DSHI_RS19900
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: lnt
locus tag: DSHI_RS19900
old locus tag: Dshi_3951
so part of: sequence
location: complement(18515..20086)
location: region:18515-20086:-1
so has part: feature:18515-20086:-1:exon
subclass of: SO_0000010

position:18515:-1
position: 18515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20086:-1
position: 20086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18515-20086:-1:exon

DSHI_RS19900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: lnt
locus tag: DSHI_RS19900
old locus tag: Dshi_3951
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807490.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO process: GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: apolipoprotein N-acyltransferase
translation: MKPGLPQFVSEDLNLFQRMGLALAAGGLTVLTLPPFSWLIAVPVAFSVLFIVLRNISTSRAFLVGWAFGLGQFGIGISWIAESFYVDAERFGALAIPAVAGLSAGLAIFPGMAAMLFAAIMQRRAVGGIAAGLLFATCWVATEWLRGHVLTGFPWNLAAYALVDYAALRQPAAWVGSYGLGFLTVFIGILPGVLTVAAPKRRAPVLVLFAVAVAGFWVGGALRSGQDVPPTDVALRIVQGNVPQVEKWVPGSRQRTLEKYLGLSAQPGRFDLLLWPETAFPGFLDEDAAARARISAALPDGRILLTGAPDRVEGDGGTRYFNTVQAYDGSGEVLTGYAKHHLVPFGEYVPLKGWLPIERLTEGLGDFTPGPGPRTLAIPGAPLVAVAICYEIIFPGHVVDDLFRPDWIFNATNDAWFGTSIGPEQHLASARMRAVEEGLPVVRAANTGISAIIDANGNVVARLDTGETGTIDAGLPGARTPTPYARFGDWTLLVLVFGCWVFGWLASLLGRDPDARHFGTEVS
SIO_010081: DSHI_RS19900
subclass of: SO_0000673
so part of: DSHI_RS19900
location: complement(18515..20086)
location: region:18515-20086:-1
so has part: feature:18515-20086:-1:exon

WP_009807490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18515-20086:-1:exon

DSHI_RS19905
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: lspA
locus tag: DSHI_RS19905
old locus tag: Dshi_3952
so part of: sequence
location: complement(20083..20556)
location: region:20083-20556:-1
so has part: feature:20083-20556:-1:exon
subclass of: SO_0000010

position:20083:-1
position: 20083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20556:-1
position: 20556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20083-20556:-1:exon

DSHI_RS19905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: lspA
locus tag: DSHI_RS19905
old locus tag: Dshi_3952
EC number: 3.4.23.36
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803461.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase II
translation: MRTCLFVGLLAALIAFLVDQATKAIVVSNATVLSSGVSVFPGFNLIYLRNDGVTFGLLGGAPWWSLVLLALGICVWLAFMLVRTSSRVEAIAYGAIIGGALGNILDRLRYRAVTDFLDFYIGTAHWPAFNMADVFVVGGVMLLLIAPWVGARLQTDS
SIO_010081: DSHI_RS19905
subclass of: SO_0000673
so part of: DSHI_RS19905
location: complement(20083..20556)
location: region:20083-20556:-1
so has part: feature:20083-20556:-1:exon

WP_007803461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20083-20556:-1:exon

DSHI_RS19910
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19910
old locus tag: Dshi_3953
so part of: sequence
location: complement(20561..21343)
location: region:20561-21343:-1
so has part: feature:20561-21343:-1:exon
subclass of: SO_0000010

position:20561:-1
position: 20561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21343:-1
position: 21343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20561-21343:-1:exon

DSHI_RS19910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19910
old locus tag: Dshi_3953
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803463.1
GO function: GO:0046873 - metal ion transmembrane transporter activity [Evidence IEA]
GO process: GO:0030001 - metal ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ZIP family metal transporter
translation: MEPLSPIALGFLGSLAAGSLTAVGAVPVLFGRIPSRATRDLLLGFAAGVMLAASFFSLIIPALDAAEGQFDNGALPAAIVCVAILLGMGAIALMNERLPHEHFKTGREGPDAASLRRVWLFIIAITIHNFPEGLAVGVGFGADGLSGGLPLAIGIGLQNAPEGLAVAVSLLGEGYSRLRAWGIAALTGLVEPVGGLLGAGIISLSQPLLPWGLAFAAGAMLYVISHEIIPETHRSGHQNRATLGLAVGLVIMLFLDVWLG
SIO_010081: DSHI_RS19910
subclass of: SO_0000673
so part of: DSHI_RS19910
location: complement(20561..21343)
location: region:20561-21343:-1
so has part: feature:20561-21343:-1:exon

WP_007803463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20561-21343:-1:exon

DSHI_RS19915
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19915
old locus tag: Dshi_3954
so part of: sequence
location: complement(21366..21824)
location: region:21366-21824:-1
so has part: feature:21366-21824:-1:exon
subclass of: SO_0000010

position:21366:-1
position: 21366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21824:-1
position: 21824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21366-21824:-1:exon

DSHI_RS19915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19915
old locus tag: Dshi_3954
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803465.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF411 domain-containing protein
translation: MKRFTPALAIAFALLPAAQAVAEAIQIDVRKTNGCGCCLSWMKHLEENGFAPMGEDMFGGSLVRFKLDNGVPQRMVSCHTALVDGYVIEGHVPAADIQRLLEDRPDAVGLAVPGMPYGSPGMGPEDDREAYDVFLIHEDGSTEVYTSYSAPD
SIO_010081: DSHI_RS19915
subclass of: SO_0000673
so part of: DSHI_RS19915
location: complement(21366..21824)
location: region:21366-21824:-1
so has part: feature:21366-21824:-1:exon

WP_007803465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21366-21824:-1:exon

DSHI_RS19920
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19920
old locus tag: Dshi_3955
so part of: sequence
location: complement(21828..23201)
location: region:21828-23201:-1
so has part: feature:21828-23201:-1:exon
subclass of: SO_0000010

position:21828:-1
position: 21828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23201:-1
position: 23201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21828-23201:-1:exon

DSHI_RS19920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19920
old locus tag: Dshi_3955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803467.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MKIRTVLAAVAVAGAFSVTAIAISGVLSKEPVPPAIAEATLWTPNPLAPPRITETNSVRPTLAQADIAFEFRPRPLLTVSPADTSLPSIEPPLVTWSREIASGETLDAVLSDAGLDASDRAEIALAIGTEYDLRRLRPGHIITVVSTTDDNPRRVELAVEDGVRIEAVFGEQLAARVLDPDPELVTFAGEAVIESSIFAALNTADIPARFAVDLAQMLGGTVDFRRDLAGGETMRLLWREARDGNKRIGQPELAFAALDIDGSVYEIVWPNDGSGQATIYVDGEVLRVFAQPVEGARLSSVFGRRTHPVYGNVRMHTGVDFAAARGTPVQATAPGRVSFIGRRGGYGRVVEIAHGSDTLTRYAHLSAVPDGLTQGQRVMAGDMIGRVGATGTATGPNLHYEVLVDGRPTDPLSDDRLAEAAEREADDTAALERLREARSLLAERLASEFAQTTTERL
SIO_010081: DSHI_RS19920
subclass of: SO_0000673
so part of: DSHI_RS19920
location: complement(21828..23201)
location: region:21828-23201:-1
so has part: feature:21828-23201:-1:exon

WP_007803467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21828-23201:-1:exon

DSHI_RS19925
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19925
old locus tag: Dshi_3956
so part of: sequence
location: complement(23198..23824)
location: region:23198-23824:-1
so has part: feature:23198-23824:-1:exon
subclass of: SO_0000010

position:23198:-1
position: 23198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23824:-1
position: 23824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23198-23824:-1:exon

DSHI_RS19925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19925
old locus tag: Dshi_3956
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803468.1
GO component: GO:0031966 - mitochondrial membrane [Evidence IEA]
GO process: GO:0033617 - mitochondrial cytochrome c oxidase assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SCO family protein
translation: MQRRQLLLYGAAGAGVLGLTLFVGWWRVDGPGAPEPKGQRPLPLSAMEFRLTDHEENEVGPGNLIGRPTMVFFGFTYCPDVCPTTLSDISGWLEELGDEASEMNVVFITVDPERDTVEAMAEYVGYFHPVIRGWTGPEDQIARAAEGFRASFERVPTEGGGYTMNHTASVFLFDAEGELVTMIDYHEQREFAVPKIQRALTEDVEGAT
SIO_010081: DSHI_RS19925
subclass of: SO_0000673
so part of: DSHI_RS19925
location: complement(23198..23824)
location: region:23198-23824:-1
so has part: feature:23198-23824:-1:exon

WP_007803468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23198-23824:-1:exon

DSHI_RS19930
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19930
old locus tag: Dshi_3957
so part of: sequence
location: complement(23824..24291)
location: region:23824-24291:-1
so has part: feature:23824-24291:-1:exon
subclass of: SO_0000010

position:24291:-1
position: 24291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23824-24291:-1:exon

DSHI_RS19930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19930
old locus tag: Dshi_3957
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005647556.1
GO function: GO:0016531 - copper chaperone activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper chaperone PCu(A)C
translation: MKKLRYTNALAVLLTVAGLSAPALAGSEDVVVENAWSRASIGVNRPGAAYMTVRNTGEDAVTLTGLATPLAMMPEIHESKTNSDGVSSMAPAGEITIEPGQSVALEPGGLHAMLMKLQEPMTEGENFPLTLTFSDGGKVTVEVPILGIAARGPEG
SIO_010081: DSHI_RS19930
subclass of: SO_0000673
so part of: DSHI_RS19930
location: complement(23824..24291)
location: region:23824-24291:-1
so has part: feature:23824-24291:-1:exon

WP_028288644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23824-24291:-1:exon

DSHI_RS19935
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19935
old locus tag: Dshi_3958
so part of: sequence
location: complement(24317..24976)
location: region:24317-24976:-1
so has part: feature:24317-24976:-1:exon
subclass of: SO_0000010

position:24317:-1
position: 24317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24976:-1
position: 24976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24317-24976:-1:exon

DSHI_RS19935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19935
old locus tag: Dshi_3958
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018001721.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin domain-containing protein
translation: MKRRGLILSVLALGVAGFGGAAWYATRPDPIAASDPIDPEMADALIRPYSPILGPEDAPVTIVEFFDPACEACRAFYPVVEDIMAEHGDAVRVVIRYTPFHGEASVEAIRVLEAARMQDVFEPVLEAVLREQPRWASHGTPAPGLILEIAASGGLDVEAARTQMLAPGVVAVLNQDRADVETVGVRQTPTFFVNGKPLDPFGEAELQRLVAVEVAASQS
SIO_010081: DSHI_RS19935
subclass of: SO_0000673
so part of: DSHI_RS19935
location: complement(24317..24976)
location: region:24317-24976:-1
so has part: feature:24317-24976:-1:exon

WP_007803472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24317-24976:-1:exon

DSHI_RS19940
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19940
old locus tag: Dshi_3959
so part of: sequence
location: complement(24973..25395)
location: region:24973-25395:-1
so has part: feature:24973-25395:-1:exon
subclass of: SO_0000010

position:24973:-1
position: 24973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25395:-1
position: 25395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24973-25395:-1:exon

DSHI_RS19940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19940
old locus tag: Dshi_3959
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803474.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: disulfide bond formation protein B
translation: MTRLSGETALGLAWIIALTASLAVLFIGEVLGQTPCVLCWFQRAFMFPLAIILGLGLWWQDRRVGRYGIALALGGAAVALWHLGLYVGVIPERIQPCTATGPSCTDDNQLVFGIPIPLMALVAFAMIGLLSALSLKETQK
SIO_010081: DSHI_RS19940
subclass of: SO_0000673
so part of: DSHI_RS19940
location: complement(24973..25395)
location: region:24973-25395:-1
so has part: feature:24973-25395:-1:exon

WP_007803474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24973-25395:-1:exon

DSHI_RS19945
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19945
old locus tag: Dshi_3960
so part of: sequence
location: complement(25401..25967)
location: region:25401-25967:-1
so has part: feature:25401-25967:-1:exon
subclass of: SO_0000010

position:25401:-1
position: 25401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25967:-1
position: 25967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25401-25967:-1:exon

DSHI_RS19945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19945
old locus tag: Dshi_3960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009827282.1
GO component: GO:0031966 - mitochondrial membrane [Evidence IEA]
GO process: GO:0033617 - mitochondrial cytochrome c oxidase assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SCO family protein
translation: MAGAAAFVFIWLLLWSDYRADLARTESEPPFLADFELTDHRGMVQTDEDFAGRWMLVFFGFTNCPDVCPTTLSEVAAVMEGLGDEAAMVQPIFITIDPERDTPTALAEYVPLFDAGIIGLTGTPEQIAATSETFPIFFERIEQATAPGGYTMGHTSHLFLFDTQAGFADSWPYGTPAEEILADLRQRI
SIO_010081: DSHI_RS19945
subclass of: SO_0000673
so part of: DSHI_RS19945
location: complement(25401..25967)
location: region:25401-25967:-1
so has part: feature:25401-25967:-1:exon

WP_007803475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25401-25967:-1:exon

DSHI_RS19950
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19950
old locus tag: Dshi_3961
so part of: sequence
location: 26181..26609
location: region:26181-26609:1
so has part: feature:26181-26609:1:exon
subclass of: SO_0000010

position:26181:1
position: 26181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26609:1
position: 26609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26181-26609:1:exon

DSHI_RS19950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19950
old locus tag: Dshi_3961
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018303599.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MLTIGTLAKKTGTKVQTIRYYEQIGLMPEPGRTEGGQRRYGDAELDRLSFVRHARQLGFSLDAIRELLDLSDHPGKSCAEADAIARRQLKQVEQRLARLEALRTELKRMVHECSGGQTSDCRVLEVLRDHSECLTDHEEIGA
SIO_010081: DSHI_RS19950
subclass of: SO_0000673
so part of: DSHI_RS19950
location: 26181..26609
location: region:26181-26609:1
so has part: feature:26181-26609:1:exon

WP_007803476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26181-26609:1:exon

DSHI_RS19955
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19955
old locus tag: Dshi_3962
so part of: sequence
location: 26692..27312
location: region:26692-27312:1
so has part: feature:26692-27312:1:exon
subclass of: SO_0000010

position:26692:1
position: 26692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27312:1
position: 27312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26692-27312:1:exon

DSHI_RS19955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19955
old locus tag: Dshi_3962
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005645239.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation transporter
translation: MAEQRNATERRTLWIVLGLNIGLAVAFFASGAFGESSALIANGLDNLSDSFVYAISLFALSRSAKWKRGAANVSGGLLILFALGILYDAWRRYVGGSDPLGTIMIVMALVAAAINALCVWLLARLRDPDVNIRAANTFSWNDFAANLGIVVAGGLVAWLGTNWPDLVVGVIVAGIAAWGGVGILRDAHGEHHKAVHNDDQVTKDSA
SIO_010081: DSHI_RS19955
subclass of: SO_0000673
so part of: DSHI_RS19955
location: 26692..27312
location: region:26692-27312:1
so has part: feature:26692-27312:1:exon

WP_008327361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26692-27312:1:exon

DSHI_RS19960
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19960
old locus tag: Dshi_3963
so part of: sequence
location: 27382..27945
location: region:27382-27945:1
so has part: feature:27382-27945:1:exon
subclass of: SO_0000010

position:27382:1
position: 27382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27945:1
position: 27945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27382-27945:1:exon

DSHI_RS19960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19960
old locus tag: Dshi_3963
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803479.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglutaminase-like domain-containing protein
translation: MNPADPHLAKTRLLDFDATSIAKLIEERGWADLPSDDRIGAIYDFVRNEITFGYNRADDIPASEVLADGHGQCNTKGTLLMALLRGVGVRCRLHGFTIHKALQRGVVPELVYPLAPSEILHSWVEVDLGDGWVNHRQNFGFVRDLLYRHVIRHWMNARVRRIRRGILPPVPGFDRPNHRHEETNRAA
SIO_010081: DSHI_RS19960
subclass of: SO_0000673
so part of: DSHI_RS19960
location: 27382..27945
location: region:27382-27945:1
so has part: feature:27382-27945:1:exon

WP_007803479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27382-27945:1:exon

DSHI_RS19965
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19965
old locus tag: Dshi_3964
so part of: sequence
location: 27935..28900
location: region:27935-28900:1
so has part: feature:27935-28900:1:exon
subclass of: SO_0000010

position:27935:1
position: 27935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28900:1
position: 28900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27935-28900:1:exon

DSHI_RS19965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19965
old locus tag: Dshi_3964
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807491.1
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation diffusion facilitator family transporter
translation: MPHDHGHAHIDPQSGDRRVSIAIWANGLLTVAQIVGGILSGSLALIADALHNFSDMASLVIAFFARKIARRPADKRMTFGYGRVEIVAALINYTTLILIGFYLIYEGGMRMIDPPEVQGWTVVILGGVALVVDTLTALLTYSMQKGSVNIRALFLHNLSDALASVAVIIGGSLILLYNMRWVDPAITIGIALYILYLAFTEIGGPIRTLMLGSPPDIDNETVVQAMRGVDGVADVHHVHLWQMQEHEAALDCHVVLTADGWGQIEKIKAAIKDRLKDDFSIGHSSLEFEHEDRAHENADLYGHGKPEKEEENHVHRDTDSS
SIO_010081: DSHI_RS19965
subclass of: SO_0000673
so part of: DSHI_RS19965
location: 27935..28900
location: region:27935-28900:1
so has part: feature:27935-28900:1:exon

WP_007803480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27935-28900:1:exon

DSHI_RS19970
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19970
old locus tag: Dshi_3965
so part of: sequence
location: 28872..29183
location: region:28872-29183:1
so has part: feature:28872-29183:1:exon
subclass of: SO_0000010

position:28872:1
position: 28872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29183:1
position: 29183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28872-29183:1:exon

DSHI_RS19970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19970
old locus tag: Dshi_3965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187173.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: STAS/SEC14 domain-containing protein
translation: MFTETLTAHDDTIGLACEGKLSESDLKRMHALLHERLQETSKPGLVLDLTRFEGYDGPSALLEVLKIDTAHRNDFRRVAVVGEGALLEWGTRFADVLTTAELR
SIO_010081: DSHI_RS19970
subclass of: SO_0000673
so part of: DSHI_RS19970
location: 28872..29183
location: region:28872-29183:1
so has part: feature:28872-29183:1:exon

WP_012187173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28872-29183:1:exon

DSHI_RS22000
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22000
old locus tag: Dshi_3966
so part of: sequence
location: 29536..30282
location: region:29536-30282:1
so has part: feature:29536-30282:1:exon
subclass of: SO_0000010

position:29536:1
position: 29536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30282:1
position: 30282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29536-30282:1:exon

DSHI_RS22000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22000
old locus tag: Dshi_3966
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009808043.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRHLLKKLLPSVVVTLTVTGLSLPMSARAQTYPIDCAILLCLSGGWPASVPCARARAEFIRRITPWPVEPPLQIWRCPMGASYETAPAPNSVNRIFEAFLQNNRTEPRQSFPAQDVATPIEAALRTPDAPNDFVLADRALRLVQDRADIDISGPEFNFVRSIRVFNIQYARQYQAGSEGDCERSANVVLGTYGTQGEFAWQRTSITALPTAQIGLERWGQNCPGIYHRSVFVDWRDYEGNYGFEQVNY
SIO_010081: DSHI_RS22000
subclass of: SO_0000673
so part of: DSHI_RS22000
location: 29536..30282
location: region:29536-30282:1
so has part: feature:29536-30282:1:exon

WP_012187317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29536-30282:1:exon

DSHI_RS19975
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19975
old locus tag: Dshi_3967
so part of: sequence
location: complement(30471..30821)
location: region:30471-30821:-1
so has part: feature:30471-30821:-1:exon
subclass of: SO_0000010

position:30471:-1
position: 30471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30821:-1
position: 30821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30471-30821:-1:exon

DSHI_RS19975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19975
old locus tag: Dshi_3967
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803330.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MTAQNIQDDLSAPDTLELRAKLFRGLSDPSRLTILDALVSDERNVQEIVGHTGLGQPNVSNHLRCLLECGLVSRRSKGRFVRYRLADRRVADLIRDADQLLASTANGVDACQSYTD
SIO_010081: DSHI_RS19975
subclass of: SO_0000673
so part of: DSHI_RS19975
location: complement(30471..30821)
location: region:30471-30821:-1
so has part: feature:30471-30821:-1:exon

WP_007803330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30471-30821:-1:exon

DSHI_RS19980
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19980
old locus tag: Dshi_3968
so part of: sequence
location: 30885..31736
location: region:30885-31736:1
so has part: feature:30885-31736:1:exon
subclass of: SO_0000010

position:30885:1
position: 30885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31736:1
position: 31736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30885-31736:1:exon

DSHI_RS19980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19980
old locus tag: Dshi_3968
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803328.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]; GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation diffusion facilitator family transporter
translation: MSQPDNSKLATASSPIRMRVQGMDCAKDAAEIERAARSAGVAEGDVKVSAATHIMTLRIADGDLPKVRPALDATGYGFEKIEDGDTSSDPAYKDPSYRRALWIVVALNLGYGVVEMFGGFLSGSQALKADALDFLGDGAITFLGLLAIGWSLTWRARSAMIQGVFLGLLGLGVVGSTLWRVLNQTTPEAGLMGAFAVGALIVNILAVLPLLKHRKGDANMRAVWLFSRNDAIGNLAVVIAAGLVAWLGSAWPDLIVAFAIAGLFLHSSWMIIRDARSDLVEAD
SIO_010081: DSHI_RS19980
subclass of: SO_0000673
so part of: DSHI_RS19980
location: 30885..31736
location: region:30885-31736:1
so has part: feature:30885-31736:1:exon

WP_007803328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30885-31736:1:exon

DSHI_RS19985
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19985
old locus tag: Dshi_3969
so part of: sequence
location: complement(31897..32124)
location: region:31897-32124:-1
so has part: feature:31897-32124:-1:exon
subclass of: SO_0000010

position:31897:-1
position: 31897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32124:-1
position: 32124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31897-32124:-1:exon

DSHI_RS19985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19985
old locus tag: Dshi_3969
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007120687.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDDDKGEGVAIANLIGTDGRSVVGWVYRWSTSELAVMWGVHGSKPVSEARPDLTEEQKQEIDFDGLKRIGSGDSK
SIO_010081: DSHI_RS19985
subclass of: SO_0000673
so part of: DSHI_RS19985
location: complement(31897..32124)
location: region:31897-32124:-1
so has part: feature:31897-32124:-1:exon

WP_012187318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31897-32124:-1:exon

DSHI_RS19990
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19990
old locus tag: Dshi_3970
so part of: sequence
location: complement(32292..32549)
location: region:32292-32549:-1
so has part: feature:32292-32549:-1:exon
subclass of: SO_0000010

position:32292:-1
position: 32292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32549:-1
position: 32549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32292-32549:-1:exon

DSHI_RS19990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19990
old locus tag: Dshi_3970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007120686.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MAKTIRTNGQLALVRALVDARQNAGLSQQQLAAKLNRHQSFVARLESGERRIDVVEFTVLARVIGFDKNEVLSIVEAATESDHKI
SIO_010081: DSHI_RS19990
subclass of: SO_0000673
so part of: DSHI_RS19990
location: complement(32292..32549)
location: region:32292-32549:-1
so has part: feature:32292-32549:-1:exon

WP_012187319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32292-32549:-1:exon

DSHI_RS19995
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19995
old locus tag: Dshi_3971
so part of: sequence
location: complement(32674..32922)
location: region:32674-32922:-1
so has part: feature:32674-32922:-1:exon
subclass of: SO_0000010

position:32674:-1
position: 32674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32922:-1
position: 32922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32674-32922:-1:exon

DSHI_RS19995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19995
old locus tag: Dshi_3971
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009803698.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLIFLVEEANSAGSCLAPVRPFVPSDSQAARDYADIIRRDFEVYIADIQDYFRCLEQERARAFEEAREVSQDYGRFLELVGD
SIO_010081: DSHI_RS19995
subclass of: SO_0000673
so part of: DSHI_RS19995
location: complement(32674..32922)
location: region:32674-32922:-1
so has part: feature:32674-32922:-1:exon

WP_044029511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32674-32922:-1:exon

DSHI_RS20000
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20000
old locus tag: Dshi_3972
so part of: sequence
location: 33138..33491
location: region:33138-33491:1
so has part: feature:33138-33491:1:exon
subclass of: SO_0000010

position:33138:1
position: 33138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33491:1
position: 33491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33138-33491:1:exon

DSHI_RS20000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20000
old locus tag: Dshi_3972
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNWDIEAPNVVTEARFRELVESGYSAEILCQESAHKKGPSYYGVWIMRVVSDEGVEKLLVTARTRTTYNDIKIREFKTITGVVSFLIGIGFSHADVPLEEGQRTTHKLAATDKGSSK
SIO_010081: DSHI_RS20000
subclass of: SO_0000673
so part of: DSHI_RS20000
location: 33138..33491
location: region:33138-33491:1
so has part: feature:33138-33491:1:exon

WP_012187321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33138-33491:1:exon

DSHI_RS22005
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22005
old locus tag: Dshi_3973
so part of: sequence
location: 33535..34149
location: region:33535-34149:1
so has part: feature:33535-34149:1:exon
subclass of: SO_0000010

position:33535:1
position: 33535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34149:1
position: 34149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33535-34149:1:exon

DSHI_RS22005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22005
old locus tag: Dshi_3973
EC number: 4.2.2.n1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008327370.1
GO function: GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MVLVMESDGSLTPSRSQNSFARNYNDGIGQGSAADGLAILGETDLGPDEVQVAALARPAPLPRAEVLNAIEATALRYAGHPALRRADLSVRDWLTLYRANIEVESAYRQDAVSSAGAIGLGQLMPATARDLGVDPRDPLQNLDGSARYLAMMLNTFGDPRLALAAYNAGPDAVRQYGGIPPYRETQNHVARVMAVVARLEGSNS
SIO_010081: DSHI_RS22005
subclass of: SO_0000673
so part of: DSHI_RS22005
location: 33535..34149
location: region:33535-34149:1
so has part: feature:33535-34149:1:exon

WP_012187322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33535-34149:1:exon

DSHI_RS20010
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20010
old locus tag: Dshi_3974
so part of: sequence
location: 34146..34439
location: region:34146-34439:1
so has part: feature:34146-34439:1:exon
subclass of: SO_0000010

position:34146:1
position: 34146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34439:1
position: 34439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34146-34439:1:exon

DSHI_RS20010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20010
old locus tag: Dshi_3974
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009808058.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MRQISNLFVASLALFLLIAEPALAQSIDLSPIQSLLQGIVDALTGPLGVVIATLAVLGVFLSWFFNIIDLRQALWVLVGIAGVAAAPTIVAAVFAGG
SIO_010081: DSHI_RS20010
subclass of: SO_0000673
so part of: DSHI_RS20010
location: 34146..34439
location: region:34146-34439:1
so has part: feature:34146-34439:1:exon

WP_012187323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34146-34439:1:exon

DSHI_RS20015
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20015
old locus tag: Dshi_3975
so part of: sequence
location: 34432..34710
location: region:34432-34710:1
so has part: feature:34432-34710:1:exon
subclass of: SO_0000010

position:34432:1
position: 34432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34710:1
position: 34710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34432-34710:1:exon

DSHI_RS20015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20015
old locus tag: Dshi_3975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008327373.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB3 family type IV secretion system protein
translation: MAERAPLFLGLVRPPKLLGLPIMYAMVWLFGSVLLFVWVQHIAVLGVAALLYPVLWKAADWDPRFIDVMMTALQETPPTRNRSIHGGDSYAP
SIO_010081: DSHI_RS20015
subclass of: SO_0000673
so part of: DSHI_RS20015
location: 34432..34710
location: region:34432-34710:1
so has part: feature:34432-34710:1:exon

WP_012187324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34432-34710:1:exon

DSHI_RS20020
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20020
old locus tag: Dshi_3976
so part of: sequence
location: 34700..37063
location: region:34700-37063:1
so has part: feature:34700-37063:1:exon
subclass of: SO_0000010

position:34700:1
position: 34700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37063:1
position: 37063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34700-37063:1:exon

DSHI_RS20020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20020
old locus tag: Dshi_3976
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807508.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system DNA-binding domain-containing protein
translation: MPREAALDLRTMTPEWYARETRLAHMLPYVSLVDHQTVRTRVNELFQCIRLDGVNSYTTDDAYLDKVTALFARIIAQLGPEFSYYVHKVSKAITPDLEPLREDSFAGEVDRLWRKKLETSGLRDKTLTLTIIHRPPPKSVLPFLNRSAPDRLKEATEKRLRRLGEAVNVFLSGLTELNPRVLSAKSGELIGFLGALNTGQELPLYPANTYGFLSFNVANTRVTFQGDHFELSEGVVGHRYGKSFTIGEYSEGTSCTMFDMLNLPVDMIVTHSFTPINSNLMAGRIKRQKRQMQASQDAALSLLEALDIAADDLEAKRQSFGEHHMVVTLFCETLDELQTLSAEIVNAAATEGVKMIGERVAAKAHYLSQHPGNQPKRVRASAVTNRNFADFAAFHRTQLGKPAALTPWGRVVTYLPTPEQSAYRFSYHEQGSPDKEPTSGHTLIMGRPGSGKSVLSAFLMTQARRAGARIFVFDYRLGMEMAVRANGGRYASLNAGQPTGLNPLWTETDARGTAWLSDWLATLLYRADKPLTPAQTNRIQEVVRQNAQASNPALRNWRDFASLFVSTDDGGDLHQRLLEWSEDGRYGWIFGQSLEDTFSLKGDVVGFDLTGILDSEADKERMAVLSYLFRRVEREIEDRRPTIIVIDEAWKALDNAYFAERLSNWLVTARKQNTVAVMMTQYASQLERTRTGKTIVEAVPTQILLPNIRAQPADYAMLNLTEKELDVLLNTGSNSRLALIRDDQGSIVVDADLSALGPTLTILGGMEKGEALVGADYRDRPDFWRLS
SIO_010081: DSHI_RS20020
subclass of: SO_0000673
so part of: DSHI_RS20020
location: 34700..37063
location: region:34700-37063:1
so has part: feature:34700-37063:1:exon

WP_012187325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34700-37063:1:exon

DSHI_RS22655
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22655
old locus tag: Dshi_3977
so part of: sequence
location: 37060..37227
location: region:37060-37227:1
so has part: feature:37060-37227:1:exon
subclass of: SO_0000010

position:37060:1
position: 37060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37227:1
position: 37227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37060-37227:1:exon

DSHI_RS22655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22655
old locus tag: Dshi_3977
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009815545.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRILITLAALGALTSCTQYREPQANCFSFLASTAATAQDCHFAPLGAPEGDVDV
SIO_010081: DSHI_RS22655
subclass of: SO_0000673
so part of: DSHI_RS22655
location: 37060..37227
location: region:37060-37227:1
so has part: feature:37060-37227:1:exon

WP_012187326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37060-37227:1:exon

DSHI_RS20025
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20025
old locus tag: Dshi_3978
so part of: sequence
location: 37217..38371
location: region:37217-38371:1
so has part: feature:37217-38371:1:exon
subclass of: SO_0000010

position:37217:1
position: 37217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38371:1
position: 38371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37217-38371:1:exon

DSHI_RS20025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20025
old locus tag: Dshi_3978
EC number: 4.2.2.n1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007120678.1
GO function: GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MTSSLPHILAFCLLPGLGFAQGVPTNDSGLTARDIVETGDRETDLAIQADKLAVRELIAEIEREQLETLRRILDAQTSFGGQGLPAMVSGLESGSGNPDRAVEAVYGTGEIDPNPGGAQMFGDASETIEQLIIRVAQETSGFAGVGRAGLSPVQWRALLQALIWQESRFTIGARSPVGAYGLTQIMPGTASDLGINPEYYDSPYLQVHGGARYLATQLNTFDGNIINALAAYNAGPGRVFEYGGVPPFRETQHYVSVIPERYNLYLTRIGGIEALGTIDPTLLANANLSLTGHGAAFYGSNSPAAIRQAALRIRDIVERISETEDVQESIALNTYARAELVRLVAARIRLQAARTRVLSAEELAQASARMAEGTFMEFTIREID
SIO_010081: DSHI_RS20025
subclass of: SO_0000673
so part of: DSHI_RS20025
location: 37217..38371
location: region:37217-38371:1
so has part: feature:37217-38371:1:exon

WP_012187327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37217-38371:1:exon

DSHI_RS20030
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20030
old locus tag: Dshi_3979
so part of: sequence
location: 38371..39180
location: region:38371-39180:1
so has part: feature:38371-39180:1:exon
subclass of: SO_0000010

position:39180:1
position: 39180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38371-39180:1:exon

DSHI_RS20030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20030
old locus tag: Dshi_3979
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009820232.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MRDLLVRTALATTLGIGLHLGTLSAAVAQGVPVVDTQNIAQNIQQLRQMIEDEILQNEQLTQLREQLATLTDQLAELQRTYEALTRLAELPEIIRTEMEDELNGLLDQEFGDILATIEAIKTGDFSGLSGSGAGEIETQMDRVLADLGFDEDTLSEMATSGNPGANRVATQATTGALVSAAAQNSYEDAGQSLERVDRLVGLIDDMEELKQSVDLNTRVTAELAIALVAMWQLEAIQTVGDGTGGVIDAATIAEEQRFMDFTLPDLRAE
SIO_010081: DSHI_RS20030
subclass of: SO_0000673
so part of: DSHI_RS20030
location: 38371..39180
location: region:38371-39180:1
so has part: feature:38371-39180:1:exon

WP_012187328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38371-39180:1:exon

DSHI_RS20035
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20035
old locus tag: Dshi_3980
so part of: sequence
location: 39197..39850
location: region:39197-39850:1
so has part: feature:39197-39850:1:exon
subclass of: SO_0000010

position:39197:1
position: 39197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39850:1
position: 39850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39197-39850:1:exon

DSHI_RS20035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20035
old locus tag: Dshi_3980
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807512.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MASEQEIIEEELVYGALRRERLWQRLGLAGLVFGIIGCLSAAAVSILDVDPPPVVVPYDPATGFALPEASVGASSVTANQAIIEAEVFRYVTDREIYNQLDNDLRIRSVLRRSDGAAESRLRQIWNSANENYPPTVYGPNARLDVEILSINRIGSNRATVRLRKRLTSINGTQTGLFTATLLFEFRPETRRSIDEVWTNPFGFTVLEYSIRSDRLEN
SIO_010081: DSHI_RS20035
subclass of: SO_0000673
so part of: DSHI_RS20035
location: 39197..39850
location: region:39197-39850:1
so has part: feature:39197-39850:1:exon

WP_012187329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39197-39850:1:exon

DSHI_RS20040
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20040
old locus tag: Dshi_3981
so part of: sequence
location: 39853..40548
location: region:39853-40548:1
so has part: feature:39853-40548:1:exon
subclass of: SO_0000010

position:39853:1
position: 39853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40548:1
position: 40548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39853-40548:1:exon

DSHI_RS20040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20040
old locus tag: Dshi_3981
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009808065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbG/VirB9 family P-type conjugative transfer protein
translation: MLFIRSLIFVIALLPGLASAEAIPRGGPNDSRVRLATYQEGQVYRLNVSLTHVTTIEFGEGESIRSIIAGDTEGFEIDGVPGGQAFAIKPVARGVHTNVTVYTNRRSYYFNVEEVRSPTFYVVQFRYPDDAARPTRAIAAQAPNYNYGASARTEFTPTRIWDDGTFTYFAFPRNAPVPAIFRYAGGRERTVNTQTPEDGVIRVSGVNRQWVLRLGEEVVCIEAIPPAEATS
SIO_010081: DSHI_RS20040
subclass of: SO_0000673
so part of: DSHI_RS20040
location: 39853..40548
location: region:39853-40548:1
so has part: feature:39853-40548:1:exon

WP_012187330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39853-40548:1:exon

DSHI_RS20045
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20045
old locus tag: Dshi_3982
so part of: sequence
location: 40545..41924
location: region:40545-41924:1
so has part: feature:40545-41924:1:exon
subclass of: SO_0000010

position:40545:1
position: 40545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41924:1
position: 41924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40545-41924:1:exon

DSHI_RS20045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20045
old locus tag: Dshi_3982
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008327387.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MSDTGNTELEKRLAALEKGSARAPIAAQRRSPFLALIVVLVIGAGGALLYLLSQPDEEEALPTATPDVFQNEGDGFGAIETLPPPEPEVVFVGPDPVEPNAELLAQITALQAQIEELRNAPEPVVEEDTAAAEAIDALTAQIAALQAASEAAQQRFQDELTARDRSLEQLRMDLELAQLEASRPQPAPAGPTEDELRAREQERLRREEEARRMAELERRAAEERAFQERRITSPTIAFGGTSGANETALTERTFGEVTDFVLNGALPSTVTQAEVIANPSNTIIQGTMIQAVMETALDSSLPGQTRAVVSEDVYSVDGVRLLIPRGSRLIGRYRAGVDIAQRRVTIAWDRIILPAGQTVQISSFGGDELGRSGVTGFVDTRFAERFGSAALISLISAAPSAAASEVQDETAADALEDVGDDLADATDSVIGDYLSIGPVIYVDQGARVTVMVDRDLEIF
SIO_010081: DSHI_RS20045
subclass of: SO_0000673
so part of: DSHI_RS20045
location: 40545..41924
location: region:40545-41924:1
so has part: feature:40545-41924:1:exon

WP_012187331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40545-41924:1:exon

DSHI_RS20050
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20050
old locus tag: Dshi_3983
so part of: sequence
location: 41929..42915
location: region:41929-42915:1
so has part: feature:41929-42915:1:exon
subclass of: SO_0000010

position:41929:1
position: 41929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42915:1
position: 42915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41929-42915:1:exon

DSHI_RS20050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20050
old locus tag: Dshi_3983
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009820228.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase, T2SS/T4P/T4SS family
translation: MSLSYLETSLDRIEAAARDDVIEICINPDGTCWGEFQGDHFMRALDQRLTGVQVRDLGNQIASSANTTMSKDRPIVSVSITYKGRPIRAQVITPPAVLSAMSISLRFFSSLPLEGIALDFLFGKERKLEDLRVEKKRALRAVVAAGLIDDALAFCVENKLNMIVSGGTSTGKTVAARKILSHVPAEERIVTIEEAAELLPTQPNAVTLIANRDAEFQTADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAIAALKTEIPMTYADMIQYIENSIDVIIQAGRHDGKRGITEFYLPGATEIGISP
SIO_010081: DSHI_RS20050
subclass of: SO_0000673
so part of: DSHI_RS20050
location: 41929..42915
location: region:41929-42915:1
so has part: feature:41929-42915:1:exon

WP_012187332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41929-42915:1:exon

DSHI_RS20055
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20055
so part of: sequence
location: 42912..43106
location: region:42912-43106:1
so has part: feature:42912-43106:1:exon
subclass of: SO_0000010

position:42912:1
position: 42912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43106:1
position: 43106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42912-43106:1:exon

DSHI_RS20055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187154.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4177 domain-containing protein
translation: MKTFEYNILSFPMTRKTSLADMQASLNEKGADGWEVVSISTSEFANVGHTVFLKRETIATGATA
SIO_010081: DSHI_RS20055
subclass of: SO_0000673
so part of: DSHI_RS20055
location: 42912..43106
location: region:42912-43106:1
so has part: feature:42912-43106:1:exon

WP_044029492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42912-43106:1:exon

DSHI_RS20060
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20060
old locus tag: Dshi_3984
so part of: sequence
location: 43103..43513
location: region:43103-43513:1
so has part: feature:43103-43513:1:exon
subclass of: SO_0000010

position:43103:1
position: 43103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43513:1
position: 43513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43103-43513:1:exon

DSHI_RS20060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20060
old locus tag: Dshi_3984
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007120671.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRQAQHLALAALALSLTPTFAVAERNLVPTLDRSFDVCPDRPAEPVWMQEIPLRQAYQRVLVQDIYRAQNLERIVQTGSCDCEIRFPSWDAAEAVFRESYASDERWEMLEASDGYNRRANAARTAAKAICDAAGNW
SIO_010081: DSHI_RS20060
subclass of: SO_0000673
so part of: DSHI_RS20060
location: 43103..43513
location: region:43103-43513:1
so has part: feature:43103-43513:1:exon

WP_012187333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43103-43513:1:exon

DSHI_RS20065
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20065
old locus tag: Dshi_3985
so part of: sequence
location: 43526..44602
location: region:43526-44602:1
so has part: feature:43526-44602:1:exon
subclass of: SO_0000010

position:43526:1
position: 43526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44602:1
position: 44602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43526-44602:1:exon

DSHI_RS20065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20065
old locus tag: Dshi_3985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009808070.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MSVVTYFVETSQAYLDTAAETQFGAVAATVGTLLVLGTTLVVILVGINMIYQYRAMDGHTAFWLAVKIGLIGIFATNWMQFNAFSSAILYGIDSIAGALIASVGGGSPGPSGTFAEEFDRLIAELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAAFILVASRLMIALLIGIAPVMIFLTLFEVTKDYFTRWLSALISFALYPIVVAGVFATITGVSSALIGELGDPEGASNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGGLGGGYSFARAAMGGQQAYNRYLIGGASGAEYAALRARQFFGVQQMPARQGMGQKGSGGSTGSADSGSKMLAQLARLARLGRR
SIO_010081: DSHI_RS20065
subclass of: SO_0000673
so part of: DSHI_RS20065
location: 43526..44602
location: region:43526-44602:1
so has part: feature:43526-44602:1:exon

WP_012187334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43526-44602:1:exon

DSHI_RS20070
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20070
old locus tag: Dshi_3986
so part of: sequence
location: complement(44763..46667)
location: region:44763-46667:-1
so has part: feature:44763-46667:-1:exon
subclass of: SO_0000010

position:44763:-1
position: 44763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46667:-1
position: 46667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44763-46667:-1:exon

DSHI_RS20070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20070
old locus tag: Dshi_3986
inference: COORDINATES: protein motif:HMM:NF024867.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTDFDHSFLRLDRLRVMARGKPVYDQEFHAGVNIIRGENSVGKSTIADFIFFILGGEFKEWKPATARVEEVQAQISTPRGKLSLRREKVEGRPPVWVYFGDIEAGGEHGIEGWEKYPIYRGQSNLSFTEVLFRSMLLPEAQSDGASNITSHQLMRLLYSDQRTPAPRLFRFESFDKATIRTAVGDLICGIRGFGLFEVELSIRELESKFAAVDSKWSALLNSFPDQIGVTVSAIESEIDGLENKKRKLTAEIEGVDDAVSSDQNASFFKDRKQAIAKLQALRQSLATTSRKVESSKLEQMELKRFIDHLTQSLLILESAERTAQVLGSIEFSHCPSCLQTLSSKVDDDTCHLCGQEIDQEVSASRYNYIRVDIELQIKESRQLLAQELQGFSDAKRHYGKLQGNYEQLTAEFALKFEMSNSPREAFLAERYSAIGRIDKELEQLRRSIQRATELDELSAEKERLNADLTRAKDQRTALQKAATRRRSSALRLVSSKAAAILRMDDSGAQEEFKVADHVDLSFEDDAILLDGLANFSESSNVFLKNAAILGLHLAACADKDFFHPRFALFDNIEDKGMTPSRSHRFQELIVKLTTETPLPNQVIFTTSMMNPELELDDYIIGPHYTEDNKTLDFG
SIO_010081: DSHI_RS20070
subclass of: SO_0000673
so part of: DSHI_RS20070
location: complement(44763..46667)
location: region:44763-46667:-1
so has part: feature:44763-46667:-1:exon

WP_012187335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44763-46667:-1:exon

DSHI_RS22450
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22450
so part of: sequence
location: complement(46660..47166)
location: region:46660-47166:-1
so has part: feature:46660-47166:-1:exon
subclass of: SO_0000010

position:46660:-1
position: 46660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47166:-1
position: 47166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46660-47166:-1:exon

DSHI_RS22450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSRLWYPQLDVASAARRFLRILDGWQGDALSIERLFVLDYFVATPALIGDIKMTNTYRNRYGELGLPKKKDEFVVFPPATLLFHSMTPIQKRALVSLVAKEILSKESYDVGAVALTNIGRRTASDLSNVHQGETETIALDFMVSLMATDEFASNSDLRSRTGLRYYD
SIO_010081: DSHI_RS22450
subclass of: SO_0000673
so part of: DSHI_RS22450
location: complement(46660..47166)
location: region:46660-47166:-1
so has part: feature:46660-47166:-1:exon

WP_099911246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46660-47166:-1:exon

DSHI_RS22010
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22010
old locus tag: Dshi_3987
so part of: sequence
location: complement(47163..48359)
location: region:47163-48359:-1
so has part: feature:47163-48359:-1:exon
subclass of: SO_0000010

position:47163:-1
position: 47163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48359:-1
position: 48359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47163-48359:-1:exon

DSHI_RS22010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22010
old locus tag: Dshi_3987
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPEEVSFTIVHNPEQALLDVVFVHGLTGDPKKTWTSKAGYWPDWMAEDHPDVRVCTFGYPASKFKKWIKKELDIFELAKLATEILCGKGVCKRPIIFVTHSLGGIITKLLLNHCHGSSDEQAAALAARTLRVMFLATPHSAPPLPQVVKKELPGWSSSHITALSGETTVLEYIRDTYGKYVASNENLKNVAYYESQRLSGVVQVVPMNCANPGISGTDPIPIEADHINICKPQSKESAIYTSVNRHIEQAKKLAADTPELSDHDTQIAAEGYSEKADYDRRDLWEKMNAADRENRYTYANSRQNSFARKYMSLGLQPGTRSDYDLLLSEVEQRFQAQVYFPLVCKGATEEEIDNAVQEKVIEPLANKKIGATTFGATNIQSAIYFLTEQCHIRWDTER
SIO_010081: DSHI_RS22010
subclass of: SO_0000673
so part of: DSHI_RS22010
location: complement(47163..48359)
location: region:47163-48359:-1
so has part: feature:47163-48359:-1:exon

WP_044029494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47163-48359:-1:exon

DSHI_RS20080
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20080
old locus tag: Dshi_3988
so part of: sequence
location: complement(48594..50594)
location: region:48594-50594:-1
so has part: feature:48594-50594:-1:exon
subclass of: SO_0000010

position:48594:-1
position: 48594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50594:-1
position: 50594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48594-50594:-1:exon

DSHI_RS20080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20080
old locus tag: Dshi_3988
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807937.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MGKVRIATGVLLVTLVTGAMGYTIASAVLTYQDLGFGAEIDFAYIAQNYLAILDRRPEDAQLIHLIIGSFAAAGMMLSLALSGSALTRFGQTHWQTSREMKANGFFGAPGTGFILGKLGAPGSRANYICSTVFPHALIVAPTGRGKTTGFVIPNLLTWQGSAVTLDVKGECFEATARHRAAQGDKVYRFAPTDWESKRTHRYNPLLRIYQLKDPARQQMELQLLATLFLQSDNDRVQGLLKGGIDLFVAAGLLAFQRKRPTLGEIYRIAASGGNKQKEYFARGHEVENRAAKLIFTRLASTNNDTLTSYVSLLMTSGLDQWQNPAIDEATAVSDFDFRTIRKKPFSVYLVVQPLMVKPLAPLIRLFFSDLLSAMQEKDPGPDEPWPVMIMLDEFNRLGKMPIVVESIETLRTYRGHLAVVTQTIPALDEIYGENTRRALQGNAGVKLYLTPSDEKTVEELSKAVGKTTKTVVTRSQSIGKNPFEGRSQSTRTEESSLLPEDEARRLPLDEIVMVIDAQMPVRAKRIQYFDDRLFKAIHAAQTGELPFPEPGGGGPQGNLSLSMRAMPMTPPPDGPRGSEADVERAREVVDGQPSGQSDVVPKKTTPVVQAVIAEEQRQMEMDFGGQLADVETVGVDDDAQMRSAVDGLDEMEAMLQEDGGERLVAR
SIO_010081: DSHI_RS20080
subclass of: SO_0000673
so part of: DSHI_RS20080
location: complement(48594..50594)
location: region:48594-50594:-1
so has part: feature:48594-50594:-1:exon

WP_044029496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48594-50594:-1:exon

DSHI_RS20085
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20085
old locus tag: Dshi_3989
so part of: sequence
location: complement(50603..52936)
location: region:50603-52936:-1
so has part: feature:50603-52936:-1:exon
subclass of: SO_0000010

position:50603:-1
position: 50603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52936:-1
position: 52936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50603-52936:-1:exon

DSHI_RS20085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20085
old locus tag: Dshi_3989
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807938.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MRLNDAVDAVTGEVFRDGWSRIRGSMQGLHVAKQSQLVRAAAGHRPAVFKAIRGGGTHTKSQLTNQLEYLTTKSTHIVDSSGFFDGKAKLEAKDIKDLTERFAKRWDAGFKPKLGQTTHMLMSFPIGTRGEDVRDIATDVAERFFQTDAGHFDYIIAVHEDRDHPHAHLVLNRRSQEGEFFFLGRNHRFNYDDFRLAMVEEAEKYGVRLEATRRVDRGVVHYPARTSEVYAAKQEGRAPRERERVGQDLTRTLAEIANTRTVYHSLAAEASREAREDIAAALFRAGEVLAHGGQLDRTGDVYMAEDQSFEDLRSLYAEKLARVQGMIAEKSDAERPVLEKRLIEIQTQVQHMQPLGLRSSTLSEVPSEGGVYSEANIDTSQLDRLAETDLRSRIDTALRGTGISTSEVVARIETGASNAALEHQWIADDLSKVAEARDLNLERRADLEKARDILNDVHVELGTLLERENVLRRDGVVEEKAVSERFHYHLDAVRAMEGTIRQEMRADGLTAQQIEDRDWEVASRAERRIEAEQRAYLEAHPDLLARPDDVIDRSEPYRETITDVARAKAITREVDRIMEGRDLRTPVADAVTDDLRARYPDMPSHLARGLGATYAAVVEIRDTEAINQVRRETEMREGLGVGTRDAPLAARSETAPQSDRTDRLAGEIVRVLDQQRAGELSAPFETEGERYAFREEIARVLDDRQLGRLTSGDADALDKVLEDRLDRLYVAKVYLQSDAATANTEALRQVVDELADAEYEKHRATDVDGETERGQVH
SIO_010081: DSHI_RS20085
subclass of: SO_0000673
so part of: DSHI_RS20085
location: complement(50603..52936)
location: region:50603-52936:-1
so has part: feature:50603-52936:-1:exon

WP_012187338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50603-52936:-1:exon

DSHI_RS20090
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20090
old locus tag: Dshi_3990
so part of: sequence
location: complement(52923..53516)
location: region:52923-53516:-1
so has part: feature:52923-53516:-1:exon
subclass of: SO_0000010

position:52923:-1
position: 52923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53516:-1
position: 53516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52923-53516:-1:exon

DSHI_RS20090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20090
old locus tag: Dshi_3990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007120663.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MSRTKRLTEIEKMQIVREAAEGVSTSELAERFEVTSRAVRYVLKADAERQTDAAIPVSAVSVKVTTAELAALDAVLAAAGIESRAEGLRRLIQAAGGVFVPDAQMAAEMARYRASLHEVGNGVAQIAKQMTRANQMGQGANGGTRAEFSELRLAQMRGLARFILDSADEIDLLLRRRRDAMQLEATAALREFAHAAE
SIO_010081: DSHI_RS20090
subclass of: SO_0000673
so part of: DSHI_RS20090
location: complement(52923..53516)
location: region:52923-53516:-1
so has part: feature:52923-53516:-1:exon

WP_012187339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52923-53516:-1:exon

DSHI_RS20095
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20095
old locus tag: Dshi_3991
so part of: sequence
location: complement(54078..54284)
location: region:54078-54284:-1
so has part: feature:54078-54284:-1:exon
subclass of: SO_0000010

position:54078:-1
position: 54078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54284:-1
position: 54284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54078-54284:-1:exon

DSHI_RS20095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20095
old locus tag: Dshi_3991
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011536569.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNHYVATVPVKFTDTDGQERTRFQRVGAMFRNTRNGDGSEFFSLKLDFPVAVSELVMFPPSAKDPQD
SIO_010081: DSHI_RS20095
subclass of: SO_0000673
so part of: DSHI_RS20095
location: complement(54078..54284)
location: region:54078-54284:-1
so has part: feature:54078-54284:-1:exon

WP_007120662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54078-54284:-1:exon

DSHI_RS20100
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20100
old locus tag: Dshi_3993
so part of: sequence
location: complement(54824..55840)
location: region:54824-55840:-1
so has part: feature:54824-55840:-1:exon
subclass of: SO_0000010

position:54824:-1
position: 54824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55840:-1
position: 55840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54824-55840:-1:exon

DSHI_RS20100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20100
old locus tag: Dshi_3993
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009815535.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GSU2403 family nucleotidyltransferase fold protein
translation: MTPLSSIAMSAYTDLVRLLKDDALSGVEGKPTLKERGDKAYWYAARRVGTEMRFIYIGEDSDETRARIDRIEELRATAKDRQAERSRLVRLLRAEGMTPIDRATGSILSAMAAAGTFRLGGTIVGTNAFRLYEGELGIRLPIGGMANTGDIDIAQFEKLSVALQDQVDPGLAETFSALKFDPLPALDQGRTWRWAQGGSGQLVEFLTPAFGDETIRDLPALGVNAQGLNYLNFLIAEPIHAAAIYRSGVLVQVPRPERYAVHKLIIADRRRDGAGSLKSAKDREQAAFLIEAMAEDRPDDLARAYATAMEVGPRWREHIGNSLKRMPDTRGMLDSLGA
SIO_010081: DSHI_RS20100
subclass of: SO_0000673
so part of: DSHI_RS20100
location: complement(54824..55840)
location: region:54824-55840:-1
so has part: feature:54824-55840:-1:exon

WP_241389327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54824-55840:-1:exon

DSHI_RS20105
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20105
old locus tag: Dshi_3994
so part of: sequence
location: complement(55973..56902)
location: region:55973-56902:-1
so has part: feature:55973-56902:-1:exon
subclass of: SO_0000010

position:55973:-1
position: 55973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56902:-1
position: 56902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55973-56902:-1:exon

DSHI_RS20105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20105
old locus tag: Dshi_3994
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009820257.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2493 domain-containing protein
translation: MAYDTASTYETIELFGLTEKDAQLPIPEDHILTDRIIRESFEALLGPLRMTGLEAEIEPLAHGLATILQRRKVALGKEVDRTADKIGALAKSHDGSEIAETALEEAQARFLQLREIVGAIEVMSEAAAECYEIETGHAFIPPAGSRASVRAQETGAVFEARQLLEQHDRETAEKSKVEGVPLIVSGATDWTDVDVIFNTLDKVRERIRQNRNQEIFLCHKGGKHGAEMIAARWARARGVAQARFDPRWSAHGRAAPFKCNDEMLDDKFAATGVVLFGGNGVALNLGQKAEAKGLTVMRVADPAKKASQD
SIO_010081: DSHI_RS20105
subclass of: SO_0000673
so part of: DSHI_RS20105
location: complement(55973..56902)
location: region:55973-56902:-1
so has part: feature:55973-56902:-1:exon

WP_012187341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55973-56902:-1:exon

DSHI_RS20110
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20110
old locus tag: Dshi_3995
so part of: sequence
location: 57594..58274
location: region:57594-58274:1
so has part: feature:57594-58274:1:exon
subclass of: SO_0000010

position:57594:1
position: 57594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58274:1
position: 58274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57594-58274:1:exon

DSHI_RS20110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20110
old locus tag: Dshi_3995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012043539.1
GO function: GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SOS response-associated peptidase family protein
translation: MCNLYSQTKSQDAMRHLFNDMLGENEELVDSTGNLPPQPGIWPDYPAPIIRHGESAAWQLAMARWGMPTPAKFLEGKRTDKGVTNIRNVGSPHWRRWLGVEHRCLVPFTSFSEIDGRRGAPRNSPVWFALDEDRPLAFFAGLRTEWTSVRKLKEGEVTAEIFGFLTCPPNAEVAPIHPKAMPVILTQPEEWRHWLTAPAEEALKLQRPLPDGRLKIVAEGVREDAV
SIO_010081: DSHI_RS20110
subclass of: SO_0000673
so part of: DSHI_RS20110
location: 57594..58274
location: region:57594-58274:1
so has part: feature:57594-58274:1:exon

WP_012187342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57594-58274:1:exon

DSHI_RS20115
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20115
old locus tag: Dshi_3996
so part of: sequence
location: 58264..58851
location: region:58264-58851:1
so has part: feature:58264-58851:1:exon
subclass of: SO_0000010

position:58264:1
position: 58264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58851:1
position: 58851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58264-58851:1:exon

DSHI_RS20115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20115
old locus tag: Dshi_3996
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRFDPAPSELFALARHRVHEAEGPGRRSFALLQAARHTEALIWIIPGHAPHQPMLRGLPEGVGERLHLIRPANETDLLWATEEALRSEGVGLVIAEPEKPLSLIAGRRLQLAAEAGRTTGLMLIREGQGSNAAETRWHCAPNASERRDSTLHQWALSKNKKGTLRTWTVHWNGKTAAVHPVSAAGKRHESAETSR
SIO_010081: DSHI_RS20115
subclass of: SO_0000673
so part of: DSHI_RS20115
location: 58264..58851
location: region:58264-58851:1
so has part: feature:58264-58851:1:exon

WP_012187343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58264-58851:1:exon

DSHI_RS20120
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20120
old locus tag: Dshi_3997
so part of: sequence
location: 58778..60277
location: region:58778-60277:1
so has part: feature:58778-60277:1:exon
subclass of: SO_0000010

position:58778:1
position: 58778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60277:1
position: 60277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58778-60277:1:exon

DSHI_RS20120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20120
old locus tag: Dshi_3997
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009808718.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase Y family protein
translation: MARRLLSIRFPRLASDTSLRRRPVEGPFALIHRSGNAEHVHCLNQAAEMRGLHPGMAAADARAICPELITRPADLAREAAALAGLRRWAGRYSPMVARDGPGGLIADISGVPHLFGGEAEMRGDLHARLERVGLTLSSAIAETRGAAQALARHGGGILPEGAAKEGIARLPVSALRIGSDVAEGLARMGLNRIGDLTDLPRAPLARRFGPGLVLRLDQALGLQPEPVSPEADAPYFGVRMTMPDPIGLEADVMSGLARLLDRLCSTLAQHHRGARRLRLELHRVDRETAQVEIGLARPMRDPERIAALFKKGVSEVEAGFGIEAMRLVAHVTEDLPPEQIGGPRTIAREDALADLFSRLGNRLGFDRVLRLLPATSKIPERSFLVTPAAYSAAEPPPPHRGPDRPIIIFPSEPVTTKGLGQPGHPPARFAWRRMSFTTLRADGPERIAPEWWFDDPAWRSGLRDYWRVETREGARLWLYHTPQAPAWPAQSWFAQGEFA
SIO_010081: DSHI_RS20120
subclass of: SO_0000673
so part of: DSHI_RS20120
location: 58778..60277
location: region:58778-60277:1
so has part: feature:58778-60277:1:exon

WP_012187344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58778-60277:1:exon

DSHI_RS20125
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20125
old locus tag: Dshi_3998
so part of: sequence
location: 60274..63624
location: region:60274-63624:1
so has part: feature:60274-63624:1:exon
subclass of: SO_0000010

position:60274:1
position: 60274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63624:1
position: 63624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60274-63624:1:exon

DSHI_RS20125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20125
old locus tag: Dshi_3998
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011046421.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: error-prone DNA polymerase
translation: MTGYAELCVTSNFTFLTGASHPEELVTRAAELGLKAIAITDRNSVAGVVRAFSALKELARLREEARAASDGAEAGPVVRSRQVTDHSSRQTMQHMPAGDAPRIPPDMVLPKLIPGARIVLTDSPVDWLALPADIAAWSRLTRLLSLGKRRATKGECHLTRKDLLDWGEGMVLIALPPDPMEHPARASLSDLRHMLRIFPGQCFLGAAPRYDGRDPTRLDQLARIAQDTGLPLVALGEVMMHRSSRRPLADVLTCLREGCTIDTIGERRLTNGEHRLKSPAEMARMFHRYPAAIRRTLEIADRCAFRLDDLRYQYPDEARDGEPAQARLERLSREGLHWRYPEGPPARIVTRVDKELKLIGEMGYAPYFLTVHDIVAFARSKGILCQGRGSAANSVVCYLLGVTEVPPESITLIFERFISKERGEPPDIDVDFEHERREEVIQWIYEQYGRHRAGLTATVIHFRSRAAIREVGKVMGLSQDVVARLSGQIWGWSSSAPGEDRMRDAGIDPADGRVALAAKLIGEIIGFPRHLSQHVGGFVITHGRLDELCPIENAAMEDRTVIEWDKDDIDALGLLKVDVLALGMLTCIRKAFGLLDDHRHLQLTLANVPPEDPVVYDMLCKADAVGVFQVESRAQLNFLPRMQPRKFYDLVCEVAIVRPGPIQGGMVHPFINRRQGKEKVEDLGPAMMEVLGRTYGVPLFQEQAMQIAVVAAGFSAAEADRLRRSLATFKRMGTIGAFRERFISGMLARSYEAGFAERCFAQIEGFGSYGFPESHAASFARLVYISAWLKRHHPAVFTCALLNSQPMGFYAPAQLVRDAREHGVEIRAISVNHSAWDCTLEPRGDGALALRLGFRQIKGMREEDANWIEAARGNGYPDVEGLWRRAGVRPDALERLAEGDAFASLGLNRRDALWAARALRGPNPLPLFGADGEGGAEPEVALPAMTLGQEVIEDYLALRLSLRAHPMELLRPRLPESLPHERLDRATGRVTVTGLVITRQRPGTASGVIFLTLEDETGVSNVVVWSRVYEAFRKAVIAGRLLRVTGRIEREGQVVHVIAERIEDISPMLSSLGRPATDAGDRQAEAAHQPASSGGGSTARHPREQAKKLFPSRDFH
SIO_010081: DSHI_RS20125
subclass of: SO_0000673
so part of: DSHI_RS20125
location: 60274..63624
location: region:60274-63624:1
so has part: feature:60274-63624:1:exon

WP_012187345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60274-63624:1:exon

DSHI_RS20130
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20130
old locus tag: Dshi_3999
so part of: sequence
location: complement(63705..64433)
location: region:63705-64433:-1
so has part: feature:63705-64433:-1:exon
subclass of: SO_0000010

position:63705:-1
position: 63705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64433:-1
position: 64433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63705-64433:-1:exon

DSHI_RS20130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20130
old locus tag: Dshi_3999
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187346.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF736 family protein
translation: MFAGTLTRNVETAAAEYTGMIHSTRFDIAIQLEARAKMSERSPDYDVTAVNKSGRKVRIGTAWNETGTTSGNPYISMQIDVGLGPFRVNAVQTKEARTAQSGEFEIIPLVSNGLMKSGSISGELTAMDADNAFTGYIANMMFDLEFMLIENSYKTEETHPDYRIEVSSPRGTPIRVGSAWMAKSSRTGNDYLSLLINTPDGDLRVNAVQNEEQRGGQTFSIIPFIDSGDQAHDAGAGLSLVA
SIO_010081: DSHI_RS20130
subclass of: SO_0000673
so part of: DSHI_RS20130
location: complement(63705..64433)
location: region:63705-64433:-1
so has part: feature:63705-64433:-1:exon

WP_012187346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63705-64433:-1:exon

DSHI_RS20135
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20135
old locus tag: Dshi_4000
so part of: sequence
location: complement(64558..64860)
location: region:64558-64860:-1
so has part: feature:64558-64860:-1:exon
subclass of: SO_0000010

position:64558:-1
position: 64558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64860:-1
position: 64860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64558-64860:-1:exon

DSHI_RS20135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20135
old locus tag: Dshi_4000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009819680.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLEDIKAAVDAGQTVHWANTGYVVHKDRLGQYLITYVPNGSCIGLTDRSGHRLNGKEAEFFIARSEDGAENPGSQSRPDGQEGGVASGGAGALPLGRQI
SIO_010081: DSHI_RS20135
subclass of: SO_0000673
so part of: DSHI_RS20135
location: complement(64558..64860)
location: region:64558-64860:-1
so has part: feature:64558-64860:-1:exon

WP_012187347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64558-64860:-1:exon

DSHI_RS20140
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20140
old locus tag: Dshi_4001
so part of: sequence
location: complement(64961..65422)
location: region:64961-65422:-1
so has part: feature:64961-65422:-1:exon
subclass of: SO_0000010

position:64961:-1
position: 64961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65422:-1
position: 65422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64961-65422:-1:exon

DSHI_RS20140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20140
old locus tag: Dshi_4001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187348.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAHPLHHAESSARKFGGVPSDYQAVHDWFDASKEHLALFTHRAMRHHAQGLFEAERVFGLTLTNSAGREIPVRWIGEQHVREDCQGRIPSMADWLRRIQPEPWMANGHIDRHVGNEPCGDPRVAWASEVAAGRTVLGLKDWMAARATQATQSA
SIO_010081: DSHI_RS20140
subclass of: SO_0000673
so part of: DSHI_RS20140
location: complement(64961..65422)
location: region:64961-65422:-1
so has part: feature:64961-65422:-1:exon

WP_012187348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64961-65422:-1:exon

DSHI_RS20145
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20145
old locus tag: Dshi_4002
so part of: sequence
location: complement(65424..65810)
location: region:65424-65810:-1
so has part: feature:65424-65810:-1:exon
subclass of: SO_0000010

position:65424:-1
position: 65424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65810:-1
position: 65810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65424-65810:-1:exon

DSHI_RS20145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20145
old locus tag: Dshi_4002
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008327427.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNPQIDYAAMAAQWRAERETTLKASRAELLAQLRALGISEVTAEYEGYGDSGNVEDVTVQPAEVQLPEPLATEVGDFAWSLAYHHHPGFENNEGGYGTLTWDIAADSITLDHADRYVECSHSYDEGL
SIO_010081: DSHI_RS20145
subclass of: SO_0000673
so part of: DSHI_RS20145
location: complement(65424..65810)
location: region:65424-65810:-1
so has part: feature:65424-65810:-1:exon

WP_012187349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65424-65810:-1:exon

DSHI_RS20150
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20150
old locus tag: Dshi_4003
pseudo: true
so part of: sequence
location: complement(65932..>67716)
location: region:65932-67716:-1
so has part: feature:65932-67716:-1:exon
subclass of: SO_0000010

position:65932:-1
position: 65932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67716:-1
position: 67716
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65932-67716:-1:exon

DSHI_RS20150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20150
old locus tag: Dshi_4003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009503768.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: strawberry notch C-terminal domain-containing protein
SIO_010081: DSHI_RS20150
subclass of: SO_0000673
so part of: DSHI_RS20150
location: complement(65932..>67716)
location: region:65932-67716:-1
so has part: feature:65932-67716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65932-67716:-1:exon

DSHI_RS20155
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20155
old locus tag: Dshi_4004
so part of: sequence
location: 67841..69367
location: region:67841-69367:1
so has part: feature:67841-69367:1:exon
subclass of: SO_0000010

position:67841:1
position: 67841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69367:1
position: 69367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67841-69367:1:exon

DSHI_RS20155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20155
old locus tag: Dshi_4004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008877989.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MNSPSNSQRRARDRADNLALVDTYHADNPGLSQGALSAARHFLKWAQARKVSVRDLDASVVDSFLRHHCRCGRYSPNQLRSPMYATYTRRFFRYLEDTGIVAIPNDTARLRQHLEAFAKKLESAGYSEVSRASLLSHAAHFAEWVLQQRVPLTAIGEGTIDQFAWHECRCGEMTKHGNRVLASHYKNRKRGAHALVRHLIDEGLLPPQAPDDVSAEDPRLISFSEWLRRERGVAPETVRRYLNEVGRWLDSLGATPEDYDAAAIRSIILDQGEERSQSSVRKTVTVLRAFLRFTIVQGACAPSLLHAVPSAVRRKLSTVPRTIPTAKIEEILASCRTDTPVEIRDRAILLLLARLALRAGDIWQLHLSDIDWRTSRLRLHGKGRRGVMMPLPQDVGDALLVYIEDARPVVASNRVFLRVQAPFTPLRSSAEIAGIVSRVLSRGGFTDLPTGSHVFRHSLASAWLRGGADLDLIGAALRHTSRDTTAIYAKVDVGMLEEVAQPWPGDAS
SIO_010081: DSHI_RS20155
subclass of: SO_0000673
so part of: DSHI_RS20155
location: 67841..69367
location: region:67841-69367:1
so has part: feature:67841-69367:1:exon

WP_012187105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67841-69367:1:exon

DSHI_RS20160
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20160
old locus tag: Dshi_4005
so part of: sequence
location: 69364..70275
location: region:69364-70275:1
so has part: feature:69364-70275:1:exon
subclass of: SO_0000010

position:69364:1
position: 69364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70275:1
position: 70275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69364-70275:1:exon

DSHI_RS20160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20160
old locus tag: Dshi_4005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010408889.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MIHHHVDRFVQLNRTLGKKFAAQETSLRAFADFAAERSITHLTAALILEWAGGAATPYAAQARFDRARAFAVFLHAEDSRHEIPAMGLLGRSRRRRPAPHILTRDQISRIMHEALLVPGLTPISPLTYHNLFGLLASTGLRISEALSLQCDDLTAEGLMVRSGKFGKSRLVPIHFSTRAALERYLEARAAVRNANDDLFVLGHGHAPTKTRAHVVFVRIVRKLGYRNPTGPGPRLHDLRHTFAVRSLEACGNNPQAVLRHMKALSTYLGHVDIANTYWYLEATPVLLKMIAATAEETWIGGAA
SIO_010081: DSHI_RS20160
subclass of: SO_0000673
so part of: DSHI_RS20160
location: 69364..70275
location: region:69364-70275:1
so has part: feature:69364-70275:1:exon

WP_012187106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69364-70275:1:exon

DSHI_RS20165
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20165
old locus tag: Dshi_4006
so part of: sequence
location: 70272..71276
location: region:70272-71276:1
so has part: feature:70272-71276:1:exon
subclass of: SO_0000010

position:70272:1
position: 70272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71276:1
position: 71276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70272-71276:1:exon

DSHI_RS20165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20165
old locus tag: Dshi_4006
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010967849.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MTPLAPDLSAFLQTHLPHECGASRHTIAAYACAFTLLLRFVTGRVKRTPSELFIEDLDIQTIRAFLEHIEEGRANSVRSRNARLAAIKSFFRFVEHRQPACLEQAMMIRAMPTKRTDAKLIDYLTKEEVRALLAAPNRHTPGGLRDRAMLHLTYAAGLRASELLAVRMDDFPDGSFSNVRILGKGRRERVLPLWKETQCAIRAWLAVRPGRVGPELFLNRDGRRMTRDGFAYRLRQHVATAERSTPSIAAKQVTPHVLRHSCAMHTLQATGDIRKVALWLGHASIQTTEMYLRADPTEKLALLEAHHAPLIQPGKFREPSDKLMQILAVAAQRA
SIO_010081: DSHI_RS20165
subclass of: SO_0000673
so part of: DSHI_RS20165
location: 70272..71276
location: region:70272-71276:1
so has part: feature:70272-71276:1:exon

WP_012187107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70272-71276:1:exon

DSHI_RS20170
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20170
old locus tag: Dshi_4007
so part of: sequence
location: complement(71315..73756)
location: region:71315-73756:-1
so has part: feature:71315-73756:-1:exon
subclass of: SO_0000010

position:71315:-1
position: 71315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73756:-1
position: 73756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71315-73756:-1:exon

DSHI_RS20170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20170
old locus tag: Dshi_4007
EC number: 3.6.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007424858.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MADRSDIEAELARVRARLADLDVERAQLQREVAALEARLAAEHVPAVRQPSFENAPVTNASPSHQKVELFRRLFAGRPDVFPVRWENRKTDRSGYSPSCANEWVKGICGKPKVKCGQCPHQKFIPPDEGVIERHLRGDDGRGGDFVAGVYPLLLGDTCWFLAADFDKASWAEDANALLETCRVKGVPAALERSRSGNGGHVWIFFSEPVSARLARQLGSVLITETMERRPEIGFASYDRLFPNQDIMPLGGFGNLIALPLQNTARKAENSVFVDASLRPYDDQWAYLSSLPRLSAAAVTQLVEAAELSGRVLGVRMPVEDEQADEPWKMPPSRRSTPRRLDVPVPTTIKVTVADQIYIDRSDLPSAMIAQLVRLAAFQNPEFYRAQAMRLPTFGKPRIVSCAELHPRHVALPRGSFDEAIRFLSDHGATADLDDLRVDGARLPETVCFDGQLRQQQSRAFDALAEHDTGVLAATTAFGKTVVASALIAHRARNTLVLVHRRELLNQWVERLGSFLQIDPKLIGTIGAGKRKLTGVIDVALIQSLVRKGEVDDIVADYGHLVVDECHHLSAASFELVARRSKARYVAGLSATVARKDGHHPIIFMQCGPVRHQVSAKSQAAESGLRHRARERHTRFRLPEPLAMAERPSMPAIYAALAEDEARNDLIFDDVLKSLEAKRSPIILTERKDHLEHLHQRFSRFAKNIVVLRGGMSAKDRKAAHAALNVDDDEERLILATGRYIGEGFDDARLDTLFLTMPIAWKGTLAQYVGRLHRRHDDKKDVLVVDYVDSSVPVLARMAAKRRTGYRALGYVME
SIO_010081: DSHI_RS20170
subclass of: SO_0000673
so part of: DSHI_RS20170
location: complement(71315..73756)
location: region:71315-73756:-1
so has part: feature:71315-73756:-1:exon

WP_012187108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71315-73756:-1:exon

DSHI_RS20175
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20175
old locus tag: Dshi_4008
so part of: sequence
location: complement(74000..76510)
location: region:74000-76510:-1
so has part: feature:74000-76510:-1:exon
subclass of: SO_0000010

position:74000:-1
position: 74000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76510:-1
position: 76510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74000-76510:-1:exon

DSHI_RS20175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20175
old locus tag: Dshi_4008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009503768.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: strawberry notch family protein
translation: MAKPKTANPTFSISDAALISALAQIGQEVDHQPLRSSALARIMRETFHGSDAGGVWEWRMAYDLKQAAAIQVLLRGDGAACDIATAKLLASRLLTETRRSEQQIRLQQFSTPLPFAAMAVRAAAIRKGETVLEPSAGTGALAAFAARAGATLLLNEIDPFRQSLLRAVFGGDVTGHDGEHIDDLLQTPVLPDVVVMNPPFASSVDRSRDKHIAAKHLIAAAKRLAPGGRLVAIMPPGFTPERDTAHWSRACGLLTPRLALTMPGQVYRKLGTSVETQLMVFDKVQEDGEMIRASVRDLDEALPFVDAVAATRPEMRPVQRAVAIPHGRPTVPSSAPRKTAAAPVAASKPQANAVVQLSIKSLEAPRDNTPVSDIYARYRPQRIEIADAQEHPTPLVESIAMASVAPPEPSGAAGSELRLPARLIKEGHLSEAQLETIIMANDAHGRNLPGRFTIDDDQTKLTRADDDPDARAYRLGYFLGDGTGCGKGRECAGLILVNWLAGRRKAIWVSKSATLIEDAIRDWIDLGGSPADIQPLSKWKPDQPIPMGDGILFVTYATLRSAGKCGTTRLSQILDWMGEDFDGVLAFDEAHAMQNAAGSEQGRGVKPSQQGLAGLRLQLAAPRARVFYISATGATSVHNLAYAARLGLWGQGPEYPFPSRESFVSAMEAGGVAAMEVVARDLKTLGLYTARALSFDGVEYDVLEHALTPAQIEIYDAYAGAFRTIHHNLEAALTATGVNDASGETNASAARASAKSRFESTKQRFFNHLLMGMKAPSIIRAIEDDLATGHACVIQVVSTGESLLKRRLETMDAEDELVEGALTPRDYVLSKALDNT
SIO_010081: DSHI_RS20175
subclass of: SO_0000673
so part of: DSHI_RS20175
location: complement(74000..76510)
location: region:74000-76510:-1
so has part: feature:74000-76510:-1:exon

WP_012187351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74000-76510:-1:exon

DSHI_RS22455
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22455
so part of: sequence
location: complement(76780..76926)
location: region:76780-76926:-1
so has part: feature:76780-76926:-1:exon
subclass of: SO_0000010

position:76780:-1
position: 76780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76926:-1
position: 76926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76780-76926:-1:exon

DSHI_RS22455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22455
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGEMTSHDAWFRSKVKEALNDQQAATPHSNVMNLVQAVIDEKRRQQS
SIO_010081: DSHI_RS22455
subclass of: SO_0000673
so part of: DSHI_RS22455
location: complement(76780..76926)
location: region:76780-76926:-1
so has part: feature:76780-76926:-1:exon

WP_153218031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76780-76926:-1:exon

DSHI_RS22015
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22015
old locus tag: Dshi_4009
so part of: sequence
location: complement(77303..78163)
location: region:77303-78163:-1
so has part: feature:77303-78163:-1:exon
subclass of: SO_0000010

position:77303:-1
position: 77303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78163:-1
position: 78163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77303-78163:-1:exon

DSHI_RS22015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22015
old locus tag: Dshi_4009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014131757.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MNQIRYFLAVCQHRNFTHAASASNVSQPSLTTAIKKLEHELGGDLFVRDRAGCRLTALGKLMQPRLQKAHDETQAAKAEAVRHTRLERVPISVGVGETIGHNRISAAVERFRTRLPQAEIELIVASTSKLLAGLREGEFDVVVTAATVSENLYRIDQLYDEAYKVVVSKSHPLSGRNAISLSTLAETDMLDRPNCEMRDALHRACADQGHELYAAYRSNRVDWLVELARQGLGAVILPTTAIPADRDLVSILIDGLEISRTVSALRYRHQTTRPETNDLIREIARV
SIO_010081: DSHI_RS22015
subclass of: SO_0000673
so part of: DSHI_RS22015
location: complement(77303..78163)
location: region:77303-78163:-1
so has part: feature:77303-78163:-1:exon

WP_012187352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77303-78163:-1:exon

DSHI_RS20185
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20185
old locus tag: Dshi_4010
so part of: sequence
location: 78320..79039
location: region:78320-79039:1
so has part: feature:78320-79039:1:exon
subclass of: SO_0000010

position:78320:1
position: 78320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79039:1
position: 79039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78320-79039:1:exon

DSHI_RS20185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20185
old locus tag: Dshi_4010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014131758.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAQILKTLAALALITTSAAAQETPMENHTASYIAMPAAEGQTEAFAEFLAGAAPIVADTEPGTVLWFALQDDDTLAIFDIFVDEEARNAHFSGAVAAALNQNADALVAGGWDDGVVANINNSDVLSVREPVDLYSATTATYITLEAAPGRGPELAALLTAAGPIVGETEPGTLFWAALQIDETSFAIFDIFTNNAGREAHFAGQVAGLLNERAAELVAGGWDDGVVANVHNFDILAIK
SIO_010081: DSHI_RS20185
subclass of: SO_0000673
so part of: DSHI_RS20185
location: 78320..79039
location: region:78320-79039:1
so has part: feature:78320-79039:1:exon

WP_012187353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78320-79039:1:exon

DSHI_RS20190
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20190
old locus tag: Dshi_4011
so part of: sequence
location: complement(79361..79879)
location: region:79361-79879:-1
so has part: feature:79361-79879:-1:exon
subclass of: SO_0000010

position:79361:-1
position: 79361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79879:-1
position: 79879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79361-79879:-1:exon

DSHI_RS20190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20190
old locus tag: Dshi_4011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007120648.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YhaV family toxin
translation: MSGDSVPAQAPLVVNGWSIYAHPLFLDQLEGLIEEVEARKARDPKTWRKKNPTKRLAAIFKLVTEAIPVDPGAAAFRQGGTLGDHRKHWFRAKFFQQYRLFYRFNSDAKVIVVAWVNDDKTLRAYGSKTDAYATFKGMLEDGNPPDNFDALLKEAAAANKRFETSLEAAPDR
SIO_010081: DSHI_RS20190
subclass of: SO_0000673
so part of: DSHI_RS20190
location: complement(79361..79879)
location: region:79361-79879:-1
so has part: feature:79361-79879:-1:exon

WP_012187354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79361-79879:-1:exon

DSHI_RS20195
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20195
old locus tag: Dshi_4012
so part of: sequence
location: complement(79876..80202)
location: region:79876-80202:-1
so has part: feature:79876-80202:-1:exon
subclass of: SO_0000010

position:79876:-1
position: 79876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80202:-1
position: 80202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79876-80202:-1:exon

DSHI_RS20195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20195
old locus tag: Dshi_4012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187077.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PrlF family antitoxin
translation: MTALAQDVSKLTDRYQTTVPAGVRKQLKLGKGDQIRYCTEPSGRVYIEPVRSDEEDPVLGAFLDFVEADIKAHPDRIRAFDGALHDRLAALVGDVDVDLDAPLSLEDE
SIO_010081: DSHI_RS20195
subclass of: SO_0000673
so part of: DSHI_RS20195
location: complement(79876..80202)
location: region:79876-80202:-1
so has part: feature:79876-80202:-1:exon

WP_005668772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79876-80202:-1:exon

DSHI_RS20200
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20200
old locus tag: Dshi_4013
so part of: sequence
location: complement(80329..80982)
location: region:80329-80982:-1
so has part: feature:80329-80982:-1:exon
subclass of: SO_0000010

position:80329:-1
position: 80329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80982:-1
position: 80982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80329-80982:-1:exon

DSHI_RS20200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20200
old locus tag: Dshi_4013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187076.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGWLFYTDCRVKSYADEKAEIARLCTFESDRRKTELVKACKVGSTWYAAARVTSLDGTPVEGTTYITDPDGSITFGAVFLTRYDDGCWGYKDMEESAGPVESRAPLSLLALLSDLKDPDSYAHAWRQRCRDWAAIPDYEEGDKIRLAAPVTLTDGSTCQIVTATHYRRGRQKRRCYRIEETGVLVRLSRASLAGSELLSSAKGAASPVLAEFLARRN
SIO_010081: DSHI_RS20200
subclass of: SO_0000673
so part of: DSHI_RS20200
location: complement(80329..80982)
location: region:80329-80982:-1
so has part: feature:80329-80982:-1:exon

WP_012187355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80329-80982:-1:exon

DSHI_RS20205
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20205
old locus tag: Dshi_4014
so part of: sequence
location: complement(80982..81674)
location: region:80982-81674:-1
so has part: feature:80982-81674:-1:exon
subclass of: SO_0000010

position:81674:-1
position: 81674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80982-81674:-1:exon

DSHI_RS20205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20205
old locus tag: Dshi_4014
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009820261.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAILKFSASAVAAQIAHARACKTFLPNWNGPVDRPALILIVGNGVHLRSNGIDGTTTRIVTTEQADPSFAFAHGMNPFRDTDWMAQRRMAFRDLTGQFYTDILDDVQVLIDRGQGAIRLATDGHSIRVFVRRASDYLIGGTYEVPSGLGGTFRVILKDACDTFAIVQNCGNSAFWEYQVDEAAPMSREREAWQGIGASAYSHNRCEDFDAMQPYRVPLDALMEIDDRRAA
SIO_010081: DSHI_RS20205
subclass of: SO_0000673
so part of: DSHI_RS20205
location: complement(80982..81674)
location: region:80982-81674:-1
so has part: feature:80982-81674:-1:exon

WP_012187356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80982-81674:-1:exon

DSHI_RS20210
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20210
old locus tag: Dshi_4015
so part of: sequence
location: complement(81749..83731)
location: region:81749-83731:-1
so has part: feature:81749-83731:-1:exon
subclass of: SO_0000010

position:81749:-1
position: 81749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83731:-1
position: 83731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81749-83731:-1:exon

DSHI_RS20210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20210
old locus tag: Dshi_4015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807539.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MTASFAPLTVAIGDLVAHPANVRSNAPETYDPENIAHLKASIAVLGLLQPLLVQKLDGKYAVLAGGRRHAALKELIADKATKGFTAKTKVDCRLVPEDCDVTTALSLAENITQAPMNAIDEFEAFARMMEVDGQTPETIAKTFGTTVAAVKRRLRYGLIHPDIRAAARAKTITLDTMKAFAEHPSQEVQREVYEALTKEDSYLQAYTVRQALKSRGVQVSDDIGAFVREVYEARGGAIAADLLDEHSVLEDAALVETILLEKLRAAAEEARIKLGFAWADAMVRYDYATMADYGRVYPGPIEPDEAAQKRVDEITAELEKLQLEMEDEGLEDDAYNALYERVDALEDEARDLQEAYSAEDLARAGVIASWSNGQVTLHIGLVRPEDTVKEEGARRSSTNTTGEEAPDAGEITYPASLAEDLKTERAMALGAAMALHPEAALDLTLFKLVSDVLASGMSVTQAIKIEARKEYRSHAKMDEIDETSLEQVAAAHDVLDLSWLDDARSPADQFAAFRALKPGEKAKLVAYATASTTQSCFARDRQRDSLMHDFEIEVMPDIRAHWTPNATLFNRFKKAWLLKILGEDLGLAQEAVTLASSSKKEIVAFCDKLFAEPFATLTDAQRAAVASWCPPMMQTAGVAFDEAEPAAEIPEPDGEVAQAA
SIO_010081: DSHI_RS20210
subclass of: SO_0000673
so part of: DSHI_RS20210
location: complement(81749..83731)
location: region:81749-83731:-1
so has part: feature:81749-83731:-1:exon

WP_012187357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81749-83731:-1:exon

DSHI_RS20215
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20215
old locus tag: Dshi_4016
so part of: sequence
location: complement(83888..84277)
location: region:83888-84277:-1
so has part: feature:83888-84277:-1:exon
subclass of: SO_0000010

position:83888:-1
position: 83888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84277:-1
position: 84277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83888-84277:-1:exon

DSHI_RS20215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20215
old locus tag: Dshi_4016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187358.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3768 domain-containing protein
translation: MSMIVQPQPDSPDPSVIAAQNDAFRKLACLGVAPAQPTQGRMHVTRSLMEAGDGFMAEAVKATGAFDTFEPENDPEGWHDFGAVEIRGETVFWKIDLYEADSDFRYGAETPDNPATTMRVLTIMLARDW
SIO_010081: DSHI_RS20215
subclass of: SO_0000673
so part of: DSHI_RS20215
location: complement(83888..84277)
location: region:83888-84277:-1
so has part: feature:83888-84277:-1:exon

WP_012187358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83888-84277:-1:exon

DSHI_RS20220
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20220
old locus tag: Dshi_4017
so part of: sequence
location: complement(84365..84574)
location: region:84365-84574:-1
so has part: feature:84365-84574:-1:exon
subclass of: SO_0000010

position:84365:-1
position: 84365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84574:-1
position: 84574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84365-84574:-1:exon

DSHI_RS20220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20220
old locus tag: Dshi_4017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007120641.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6330 family protein
translation: MSRKEPKTLRVACFNDGRRKIISFKRGAYWWSASEGAYPLSAALESITDQGGWIETIPNPNYRPKGLFG
SIO_010081: DSHI_RS20220
subclass of: SO_0000673
so part of: DSHI_RS20220
location: complement(84365..84574)
location: region:84365-84574:-1
so has part: feature:84365-84574:-1:exon

WP_012187359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84365-84574:-1:exon

DSHI_RS20225
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20225
old locus tag: Dshi_4018
so part of: sequence
location: complement(84598..85536)
location: region:84598-85536:-1
so has part: feature:84598-85536:-1:exon
subclass of: SO_0000010

position:84598:-1
position: 84598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85536:-1
position: 85536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84598-85536:-1:exon

DSHI_RS20225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20225
old locus tag: Dshi_4018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807542.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MARSRTPKFDASEVITNEIIRIIERGVLPWRKPWTAGGSSRPLRVGGEPYQGVNNFLLTMRTVMAGHSSPFWMTLPQANALDAKVRKGEKSSVVVYYGQSRKDAGGEDDRSDGDDHSEEARIFRFQKSYRVFNACQIEGLPDSFFPDPEPVPEHPPSEPIPHMQAFFDAIDITTVFTGTEAYYLPPVDKVYMPSITRFENPRNFYGVWAHELAHATKAPHRLNRDFGLSKFGNTSYAREEIVAELTSVFLGQTLGFTAHTLEMNAAYLHNWLRVLRSDKGAIFKHAADAQRACDYLIARSEAGRAGRSAEAA
SIO_010081: DSHI_RS20225
subclass of: SO_0000673
so part of: DSHI_RS20225
location: complement(84598..85536)
location: region:84598-85536:-1
so has part: feature:84598-85536:-1:exon

WP_012187360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84598-85536:-1:exon

DSHI_RS20230
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20230
old locus tag: Dshi_4019
so part of: sequence
location: complement(85577..86062)
location: region:85577-86062:-1
so has part: feature:85577-86062:-1:exon
subclass of: SO_0000010

position:85577:-1
position: 85577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86062:-1
position: 86062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85577-86062:-1:exon

DSHI_RS20230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20230
old locus tag: Dshi_4019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008282917.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKGIPMQSGVLRVLRATAASWWRHRELRRTGQSARARQLERETVLRDLGYLRQAATLPNAHVICGDGGTFLHLGWTTVSTFAPIERFPLAALAVALGTPFIDIRPVTDGIGFANLPRVTRGRSVDADHSGAGQSVSLTTYIDMVERLGARIVNDPRPRQST
SIO_010081: DSHI_RS20230
subclass of: SO_0000673
so part of: DSHI_RS20230
location: complement(85577..86062)
location: region:85577-86062:-1
so has part: feature:85577-86062:-1:exon

WP_012187361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85577-86062:-1:exon

DSHI_RS20235
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20235
old locus tag: Dshi_4020
so part of: sequence
location: 86341..87543
location: region:86341-87543:1
so has part: feature:86341-87543:1:exon
subclass of: SO_0000010

position:86341:1
position: 86341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87543:1
position: 87543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86341-87543:1:exon

DSHI_RS20235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20235
old locus tag: Dshi_4020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807962.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MLETPARIEPCFFEEHIPTELADLSVDIQRETTGLGQGLHPDSAAELADLVRVMNCYYSNLIEGHNTRPRDIERALAGAELEEETRPLALEARAHVIVQRAIDEMHRKGTLPRPTSVEFLTWVHKSFYDEMPEEFRVIEHPDGTQEPIVPGRMRQDDDREVAVGRHLPPSSSRVAAFMDHFDKRFQIAARSSSGRIIAIASAHHRLNYIHPFPDGNGRVSRLMSHAMALTAGIGGQGLWSVSRGLARGLTDRGEYKRMMDLADSPRRGDRDGRGNLSEAALKTFSEWFLKVTLDQITFSARLFDLGGLDQRYRRLVADTIDDKRAPELISAVLRHGALERGDAQIVLKTSERTARNTLSKLTAAGYLTSASPKTPVRLAFPLDYRERLFPNLFGDGDMPV
SIO_010081: DSHI_RS20235
subclass of: SO_0000673
so part of: DSHI_RS20235
location: 86341..87543
location: region:86341-87543:1
so has part: feature:86341-87543:1:exon

WP_012187362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86341-87543:1:exon

DSHI_RS20240
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: repC
locus tag: DSHI_RS20240
old locus tag: Dshi_4021
so part of: sequence
location: complement(87675..88910)
location: region:87675-88910:-1
so has part: feature:87675-88910:-1:exon
subclass of: SO_0000010

position:87675:-1
position: 87675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88910:-1
position: 88910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87675-88910:-1:exon

DSHI_RS20240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: repC
locus tag: DSHI_RS20240
old locus tag: Dshi_4021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187363.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: MDYTPVTPFRRTIDAAILKHQAATQEDLPPAGANKWEVLRELAAARVAFGLSDRDLTVLQALVSFHQATILGGNDSELIVHPSNKAICERLNGMPCSTMRRHLSNLVQTGFVVRRDSPNGKRYARRYGDEKVAFGFDLSPLVRRFQEVCEAAETVRAAEERYKRLRATVSLMRRDLAGLAEYGRSLRPDQGVWDQFSDLAALMARDLRRKLEMEDLRRIEDALGSALDHARSLLDGCETENMSTNDAVSEQHYQNSNKDSYDLEPRLEKARGGGAVRETPEVANSHLCSEDEGNSTATIDDQLMPNIPLGLVLASCQEFKAYSEQPVRHWHDLVRVADVVRPMMGISPSAWDEAKRYMGPEEASVVIVAMLERFADIRSPGGYLRTLSSKAAIGEFSCGPMIMALMRRDAA
SIO_010081: DSHI_RS20240
subclass of: SO_0000673
so part of: DSHI_RS20240
location: complement(87675..88910)
location: region:87675-88910:-1
so has part: feature:87675-88910:-1:exon

WP_012187363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87675-88910:-1:exon

DSHI_RS20245
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: repB
locus tag: DSHI_RS20245
old locus tag: Dshi_4022
so part of: sequence
location: complement(89088..90104)
location: region:89088-90104:-1
so has part: feature:89088-90104:-1:exon
subclass of: SO_0000010

position:89088:-1
position: 89088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90104:-1
position: 90104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89088-90104:-1:exon

DSHI_RS20245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: repB
locus tag: DSHI_RS20245
old locus tag: Dshi_4022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009815512.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepB
translation: MTSGKKKRMSMLDSLAAAGAPSPAPQTGAVTPMMTSNRALRSARDAVDSHHVWELDPASIEDGRMADRLDPADVLDLRDAIEANGQTVPILVRRAPGEDDRYLLVYGRRRLEAIRQSDKVTKVRALVTNLDDDSALRAQISENMGRRDLSFIEKALFAKDLVSSGFGNQSQVAEILTVTKSSISMAIAIADMVGPDLVRAIGAAHGIGRPRWESLGRAIDENGLDCEDLIGIAKEARENAETSMVVDDVASTNDPSIQAFLAVEKAVTKAIKPAKSPSPAPPSSVPLKIGGKRGGTVKRTAKGLSIELAGGDFADWVETQVHDMIEDLHERWKQRSED
SIO_010081: DSHI_RS20245
subclass of: SO_0000673
so part of: DSHI_RS20245
location: complement(89088..90104)
location: region:89088-90104:-1
so has part: feature:89088-90104:-1:exon

WP_012187364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89088-90104:-1:exon

DSHI_RS20250
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: repA
locus tag: DSHI_RS20250
old locus tag: Dshi_4023
so part of: sequence
location: complement(90101..91288)
location: region:90101-91288:-1
so has part: feature:90101-91288:-1:exon
subclass of: SO_0000010

position:90101:-1
position: 90101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91288:-1
position: 91288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90101-91288:-1:exon

DSHI_RS20250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: repA
locus tag: DSHI_RS20250
old locus tag: Dshi_4023
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008558667.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepA
translation: MDNTFVHEDLNAVIRQHSEWLANQLHSQRESLFPPDAEKTMRKFTSGEAAALLGVNDSYLRKLNLDGKGPSPELTAGNRRLYSAQDIQALRVLLEKTARKPGDYVPGRRERDHLQVIGVMNFKGGSGKTTTSAHLAQRLALRGYRVLGIDLDPQASFTALHGVQPELDLEDGGTLYDAIRYEDPEPIRSVIRKTYIPNLDLIPGNLELMEFEHDTPRALAQGNAGLFFFRVKEALAQVDEDYDVVVIDCPPQLGFLTMSALSAATGVLVTIHPEMLDVMSMSQFLRMTADLMDVIAESGADMSHDWMRYVLTRYEPQDAPQNRIVAFLRTMYGEAVLNSPMLKSTAISDAGLTKQTLYEVERSAFTRSTYDRAIESLNTLNDEIADLIQKTWGRT
SIO_010081: DSHI_RS20250
subclass of: SO_0000673
so part of: DSHI_RS20250
location: complement(90101..91288)
location: region:90101-91288:-1
so has part: feature:90101-91288:-1:exon

WP_012187365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90101-91288:-1:exon

DSHI_RS22020
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22020
old locus tag: Dshi_4024
so part of: sequence
location: 91602..91829
location: region:91602-91829:1
so has part: feature:91602-91829:1:exon
subclass of: SO_0000010

position:91602:1
position: 91602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91829:1
position: 91829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91602-91829:1:exon

DSHI_RS22020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22020
old locus tag: Dshi_4024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009503866.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MQVAKWGNSLAVRLPADLVRELGLKEGDQVDLVKDDGTILVRRQPRADEVLQGLRRFRRKLPKDARLSRDAAHER
SIO_010081: DSHI_RS22020
subclass of: SO_0000673
so part of: DSHI_RS22020
location: 91602..91829
location: region:91602-91829:1
so has part: feature:91602-91829:1:exon

WP_012187366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91602-91829:1:exon

DSHI_RS20255
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20255
old locus tag: Dshi_4025
so part of: sequence
location: 91819..92214
location: region:91819-92214:1
so has part: feature:91819-92214:1:exon
subclass of: SO_0000010

position:91819:1
position: 91819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92214:1
position: 92214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91819-92214:1:exon

DSHI_RS20255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20255
old locus tag: Dshi_4025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011331447.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MSAEFADTNVVLYLLDDGPKAERAEEILGQGPRISVQVLNEAMVNCRRKAGLSWEDTGAFLEGITSVCPVEGLTVQTHQVGRALAEKYQLSVYDAMIVSAALIAGCTTLWTEDMHDGLLVEDRLRIVNPFA
SIO_010081: DSHI_RS20255
subclass of: SO_0000673
so part of: DSHI_RS20255
location: 91819..92214
location: region:91819-92214:1
so has part: feature:91819-92214:1:exon

WP_012187367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91819-92214:1:exon

DSHI_RS20260
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20260
old locus tag: Dshi_4026
so part of: sequence
location: complement(92198..93094)
location: region:92198-93094:-1
so has part: feature:92198-93094:-1:exon
subclass of: SO_0000010

position:92198:-1
position: 92198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93094:-1
position: 93094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92198-93094:-1:exon

DSHI_RS20260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20260
old locus tag: Dshi_4026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010138187.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MSLIGYARVSTEDQTPLPQSETLQSAGCAEIFEEHASGGNRARPVLARVLERVQSGDTLVVVRIDRLARSLSHLLEVIERLEAKGAFFRSLQDPIDTASPQGKFTLQVLGAAAEFERALIRERTKAGLVSARAKGRVGGNPGLRTKDPAALRKVRLARQDGYMERLNETAQDWVPHVRRLRPDMAWEDVLRTINAPLPQDRRWTQSRLLRAVKAYVRDGFLPAEVLGRAGRRKTDDRLPAIVAAIKGSDPDITLQAICDRLEAMRERTPRGRTSWQPSSVRMLLERAERLGLLVRQMD
SIO_010081: DSHI_RS20260
subclass of: SO_0000673
so part of: DSHI_RS20260
location: complement(92198..93094)
location: region:92198-93094:-1
so has part: feature:92198-93094:-1:exon

WP_012187368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92198-93094:-1:exon

DSHI_RS20265
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20265
old locus tag: Dshi_4027
so part of: sequence
location: complement(93153..94271)
location: region:93153-94271:-1
so has part: feature:93153-94271:-1:exon
subclass of: SO_0000010

position:93153:-1
position: 93153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94271:-1
position: 94271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93153-94271:-1:exon

DSHI_RS20265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20265
old locus tag: Dshi_4027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807854.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MEETPEIQPPDAEKSTSAPSDSNNQAQRDERDQVSTDPIALPAHVAGSGTLDRLVDTARDYARASTAENTNKAYAADWKHFARWCRLKGTDPLPPSPEMIGLYLTDLAAPAKGTPALSVSTIERRLSGLAWNYAQRGFSLDRKDRHIANVLAGIKRRHARPPVQKEAILPEDILAMVATLPFDLRGLRDRAILLIGFAGGLRRSEVVSLDVSKDDTPDSSGWIDVFEDGAVLTLNAKTGWREVEIGRGSSEQTCPVHALEQWLHFAKIDFGPVFTRTSRDGKRAMDERLNDKHVARLIKKTVLKSGIRAELPENERLALFSGHSLRAGLASSAEVDERFVQKQLGHASAEMTRRYQRRRDRFRVNLTKAAGL
SIO_010081: DSHI_RS20265
subclass of: SO_0000673
so part of: DSHI_RS20265
location: complement(93153..94271)
location: region:93153-94271:-1
so has part: feature:93153-94271:-1:exon

WP_012187369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93153-94271:-1:exon

DSHI_RS20270
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20270
old locus tag: Dshi_4028
so part of: sequence
location: 94398..95282
location: region:94398-95282:1
so has part: feature:94398-95282:1:exon
subclass of: SO_0000010

position:94398:1
position: 94398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95282:1
position: 95282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94398-95282:1:exon

DSHI_RS20270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20270
old locus tag: Dshi_4028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009819736.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1403 family protein
translation: MTFTRPDHISDRDTLPRMPAWVTSARAETLEDVAFLSGAALSQLHLVLGYKEVPQPLLRDRLVLRAAEACVAFSGRPERVGELRDAVYLLRPGDLPGPAGETYLAWQRAAERPVSIKVLDRALPTIEPGQIATWLDAGKGAPVTRAVMVLEAVLREAPREDLAALILADAALALAIGWDHLVPMLAPGLKRADLRKQGGDLRLACHRALISSVIEAVRQAADLARRAAQLKAVAPKLRAKGAGDAVEMFLTRDAVAPSALPLPDRAARRLCDRLVDLGAVRELTGRDTFRLYGV
SIO_010081: DSHI_RS20270
subclass of: SO_0000673
so part of: DSHI_RS20270
location: 94398..95282
location: region:94398-95282:1
so has part: feature:94398-95282:1:exon

WP_012187056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94398-95282:1:exon

DSHI_RS20275
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20275
old locus tag: Dshi_4029
so part of: sequence
location: 95285..95902
location: region:95285-95902:1
so has part: feature:95285-95902:1:exon
subclass of: SO_0000010

position:95285:1
position: 95285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95902:1
position: 95902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95285-95902:1:exon

DSHI_RS20275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20275
old locus tag: Dshi_4029
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009820064.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMC-Scp complex subunit ScpB
translation: MAKDRSDPELDRELPDLPPELRWREWIRRIEAVLFASASPVPRQDLARIVGQGASVDLLVEDLAADLDGRAFEIAQVAGGWMFRTRAAYAPAIRAAADIGDQFLDLSEFDTAVLAAIAYHQPITRDGLKDIFGKEISRELIGRLHAQGLIGTGPRSPRRGAPYTFVTTERFLAVFGVESLQDLPDREGLEDAGLGHQKAESVRVD
SIO_010081: DSHI_RS20275
subclass of: SO_0000673
so part of: DSHI_RS20275
location: 95285..95902
location: region:95285-95902:1
so has part: feature:95285-95902:1:exon

WP_012187055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95285-95902:1:exon

DSHI_RS20280
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20280
old locus tag: Dshi_4030
so part of: sequence
location: 95952..96215
location: region:95952-96215:1
so has part: feature:95952-96215:1:exon
subclass of: SO_0000010

position:95952:1
position: 95952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96215:1
position: 96215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95952-96215:1:exon

DSHI_RS20280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20280
old locus tag: Dshi_4030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011930898.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MQSGAYDPVDLERIDPARNMARFYRLSVQPTLFGEQSVIRSWGRIGTQGRSMMVTYASEGDAVKACKKLLCSKVARGYLCLNDVEKS
SIO_010081: DSHI_RS20280
subclass of: SO_0000673
so part of: DSHI_RS20280
location: 95952..96215
location: region:95952-96215:1
so has part: feature:95952-96215:1:exon

WP_012187054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95952-96215:1:exon

DSHI_RS20285
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20285
old locus tag: Dshi_4031
so part of: sequence
location: 96285..97403
location: region:96285-97403:1
so has part: feature:96285-97403:1:exon
subclass of: SO_0000010

position:96285:1
position: 96285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97403:1
position: 97403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96285-97403:1:exon

DSHI_RS20285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20285
old locus tag: Dshi_4031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803314.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MAWNWQISGWPEFRYDEAALAPLEQRFLLSSGEVLGAVHHVNPSERDQLRIDLLSDEAMKTSAIEGEMLDRRSVQSSLRRHLGLEPDSYPNKPREQGVAEMMVDVYSTYAEPLAHGTLFRWHEMLLAFDKRLEAIGSYRQHEDAMQIVSGRFDRPVVHFEAPPSVQVPEEMDRYVDWFNRTEPGAEEPLPALTRAGLSHLYFESIHPFEDGNGRLGRALAEKSLAQSIGQPSLIALAFTLERKRKDYYDQLERHQKTLEVTPWLVWFAKSVLEAQQVTLGRVGFFIAKAHFYGRHRDQLNERQAKVIERMFREGPDGFKGGLSAENYISITGISRATATRDLQELVEIGALTRTGERRYTRYWLKSLAGIIA
SIO_010081: DSHI_RS20285
subclass of: SO_0000673
so part of: DSHI_RS20285
location: 96285..97403
location: region:96285-97403:1
so has part: feature:96285-97403:1:exon

WP_012187053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96285-97403:1:exon

DSHI_RS22025
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22025
old locus tag: Dshi_4032
so part of: sequence
location: complement(97400..98122)
location: region:97400-98122:-1
so has part: feature:97400-98122:-1:exon
subclass of: SO_0000010

position:97400:-1
position: 97400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98122:-1
position: 98122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97400-98122:-1:exon

DSHI_RS22025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22025
old locus tag: Dshi_4032
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQAKMRNANTRSGFALIVVLSGLTVLTALFAVTSAIMMARLERSHSTAVLVGTNRLNHEALRLVLQGEVPDASAALLQLELGGATYQITLQDTGGLIDLNTAAPELIDMVADHLGLPEEALDRLRDWRRTPHRLIRTSDFLRVTDASPALNSKLEEIATVYSGRRGIAPDVAPQAVLELISDHGSSREAALEEIDGEFVSAPSGVNFRVVVQDSKTRAEWIAGTVHLPRTSDNRRVLWLR
SIO_010081: DSHI_RS22025
subclass of: SO_0000673
so part of: DSHI_RS22025
location: complement(97400..98122)
location: region:97400-98122:-1
so has part: feature:97400-98122:-1:exon

WP_012187052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97400-98122:-1:exon

DSHI_RS22030
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22030
so part of: sequence
location: 98233..98990
location: region:98233-98990:1
so has part: feature:98233-98990:1:exon
subclass of: SO_0000010

position:98233:1
position: 98233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98990:1
position: 98990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98233-98990:1:exon

DSHI_RS22030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611905.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MSDLFWLTDAQMARLAPFFPKSHGKPRVDDRRVLSGIIFINRNGLRWRDAPVAYGPHKTLYNRWKRWSDKGIFARMMAGLAAEHGERKTVMIDATYLKAHRTATSLGGQKGGRGRLIGRTKGGMNTKLHAICDSQGRPLNLFVTAGQVSDYIGARALVSSLPKVDWLLGDRGYDADWFREALQDKGIRPCIPGRKQRKATVKYDKRRYKRRNRIEIMFGRLKDWRRVATRYDRCPKVFLSAIALAALVIYWL
SIO_010081: DSHI_RS22030
subclass of: SO_0000673
so part of: DSHI_RS22030
location: join(98233..98554,98554..98990)
location: region:98233-98990:1
so has part: feature:98233-98554:1:exon
so has part: feature:98554-98990:1:exon

WP_085930427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98233-98554:1:exon

position:98554:1
position: 98554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98554-98990:1:exon

DSHI_RS20300
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20300
old locus tag: Dshi_4035
so part of: sequence
location: 99093..100121
location: region:99093-100121:1
so has part: feature:99093-100121:1:exon
subclass of: SO_0000010

position:99093:1
position: 99093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100121:1
position: 100121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99093-100121:1:exon

DSHI_RS20300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20300
old locus tag: Dshi_4035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005859550.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MKLFVGLDVSLAKTSVCVISEYGKIIKEAETESEPEVLARWLHDLDGSIAAIGLEAGPLSQWLHRGLTEAGLDTVLMETRQVKGALKAMPIKTDRRDAEGIARLLHLGWFRPVHCKSVSAQETRAVLGARKAIQQNMIALEMSLRGLLRNFGLKVGAISRGRFETRIRELADGNPMLETATDPMLRARATLRQELAGLEERVRQLAWDDQVCQRLMSMPGIGAVVALTFRAAVDDPARFRSSKRIGPWVGLTPSRNQSGERDVSGGITKAGDVNLRRTLCQAATVMMNRGRSTWLRTWGAQLAQRRGRKIAMVALARRIAVILHRIWVDGTTFQPDAAPNLA
SIO_010081: DSHI_RS20300
subclass of: SO_0000673
so part of: DSHI_RS20300
location: 99093..100121
location: region:99093-100121:1
so has part: feature:99093-100121:1:exon

WP_012187049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99093-100121:1:exon

DSHI_RS20305
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20305
old locus tag: Dshi_4036
pseudo: true
so part of: sequence
location: complement(<100517..100657)
location: region:100517-100657:-1
so has part: feature:100517-100657:-1:exon
subclass of: SO_0000010

position:100517:-1
position: 100517
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:100657:-1
position: 100657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100517-100657:-1:exon

DSHI_RS20305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20305
old locus tag: Dshi_4036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002722009.1
GO function: GO:0008121 - ubiquinol-cytochrome-c reductase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ubiquinol-cytochrome c reductase iron-sulfur subunit N-terminal domain-containing protein
SIO_010081: DSHI_RS20305
subclass of: SO_0000673
so part of: DSHI_RS20305
location: complement(<100517..100657)
location: region:100517-100657:-1
so has part: feature:100517-100657:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100517-100657:-1:exon

DSHI_RS22460
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22460
so part of: sequence
location: 100713..100901
location: region:100713-100901:1
so has part: feature:100713-100901:1:exon
subclass of: SO_0000010

position:100713:1
position: 100713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100901:1
position: 100901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100713-100901:1:exon

DSHI_RS22460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAHLSTDHQTGLVGALMVRARAFCHHEVVLLVMRPDGHQTKETKSLNLRGIAIDTERHAIF
SIO_010081: DSHI_RS22460
subclass of: SO_0000673
so part of: DSHI_RS22460
location: 100713..100901
location: region:100713-100901:1
so has part: feature:100713-100901:1:exon

WP_157865443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100713-100901:1:exon

DSHI_RS22910
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22910
old locus tag: Dshi_4037
so part of: sequence
location: 100987..101349
location: region:100987-101349:1
so has part: feature:100987-101349:1:exon
subclass of: SO_0000010

position:100987:1
position: 100987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101349:1
position: 101349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100987-101349:1:exon

DSHI_RS22910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22910
old locus tag: Dshi_4037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015886710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MGKAHPVELRERAVRLVEQGNTHTEAARRLCVSIKFVNDMVRLKRETGSLAPKPQGNPGRGKLTSVKGWVESRITAQPDLTIDELTAELAAKHGVKVHRSSVGRLLLRLGLSHKKRPASP
SIO_010081: DSHI_RS22910
subclass of: SO_0000673
so part of: DSHI_RS22910
location: 100987..101349
location: region:100987-101349:1
so has part: feature:100987-101349:1:exon

WP_012178914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100987-101349:1:exon

DSHI_RS22915
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22915
old locus tag: Dshi_4038
so part of: sequence
location: 101366..101941
location: region:101366-101941:1
so has part: feature:101366-101941:1:exon
subclass of: SO_0000010

position:101366:1
position: 101366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101941:1
position: 101941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101366-101941:1:exon

DSHI_RS22915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22915
old locus tag: Dshi_4038
inference: COORDINATES: protein motif:HMM:NF033545.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MADLRRIWIGKRQPFMARHLERLAFIDETSLKTNMAKTTGWAPRGQRLVDHAPFGHWRTQTFIGALRHDRLDAPWVIDGAMNGELFDLYIETQLVPTLGPGDVVILDNLSSHKSPGAAKAMRDIGAWFLFLPPYSPDLNPIEMAFSKLKVLIRKAAARTYHELWQAVGHVCDLFTDEECYNFFKAAGYKTD
SIO_010081: DSHI_RS22915
subclass of: SO_0000673
so part of: DSHI_RS22915
location: 101366..101941
location: region:101366-101941:1
so has part: feature:101366-101941:1:exon

WP_203426276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101366-101941:1:exon

DSHI_RS20320
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20320
old locus tag: Dshi_4039
so part of: sequence
location: complement(101913..102341)
location: region:101913-102341:-1
so has part: feature:101913-102341:-1:exon
subclass of: SO_0000010

position:101913:-1
position: 101913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102341:-1
position: 102341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101913-102341:-1:exon

DSHI_RS20320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20320
old locus tag: Dshi_4039
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLIPFVLAIVMAAPVAAQHANSAAGHDMGGPQETGQSAFAALAEIVTILQADPETDWERVDIDGLRRHLVDMDLLTQEAVVARTLRPEGARFEIRGTPRVLEAIRAMVPAHAPFLAAETGWDVVTEDLERVAFNRFYILRP
SIO_010081: DSHI_RS20320
subclass of: SO_0000673
so part of: DSHI_RS20320
location: complement(101913..102341)
location: region:101913-102341:-1
so has part: feature:101913-102341:-1:exon

WP_012187047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101913-102341:-1:exon

DSHI_RS20325
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20325
old locus tag: Dshi_4040
so part of: sequence
location: 102417..102983
location: region:102417-102983:1
so has part: feature:102417-102983:1:exon
subclass of: SO_0000010

position:102417:1
position: 102417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102983:1
position: 102983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102417-102983:1:exon

DSHI_RS20325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20325
old locus tag: Dshi_4040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009824462.1
GO function: GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MLPNPYDHIPSSALRPISGAVGDTVFHQGDPTHGLYVVQTGRVHLERVGPDGERFIIHRAQAGTSFAEASVFSEVYHCDAVIVEAGALIRIDKASVLAAFADPAFARAYGRQAAQQIQAQRQMLEIVGIRRAEDRVMAGLIAGLLEGSIVEFAARLQLSHEATYRALRKLVQDGRVMNPSRGIYHLHP
SIO_010081: DSHI_RS20325
subclass of: SO_0000673
so part of: DSHI_RS20325
location: 102417..102983
location: region:102417-102983:1
so has part: feature:102417-102983:1:exon

WP_012187046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102417-102983:1:exon

DSHI_RS20330
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20330
old locus tag: Dshi_4041
so part of: sequence
location: complement(102989..103441)
location: region:102989-103441:-1
so has part: feature:102989-103441:-1:exon
subclass of: SO_0000010

position:102989:-1
position: 102989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103441:-1
position: 103441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102989-103441:-1:exon

DSHI_RS20330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20330
old locus tag: Dshi_4041
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187045.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF411 domain-containing protein
translation: MMKRRTFLLAGAAATLPLRALANTEPVIKVLKTPTCGCCTAWVDHVRQAGFAVEAQDVDQDALYAFKDRLQIAPELAGCHTAVVGDYFIEGHVPAADITRLLAEQPMARGLTVPRMPMSSPGMGGPGAGDAFDTLLVGSDGATSVFASHS
SIO_010081: DSHI_RS20330
subclass of: SO_0000673
so part of: DSHI_RS20330
location: complement(102989..103441)
location: region:102989-103441:-1
so has part: feature:102989-103441:-1:exon

WP_012187045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102989-103441:-1:exon

DSHI_RS20335
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20335
old locus tag: Dshi_4042
pseudo: true
so part of: sequence
location: complement(<103530..104351)
location: region:103530-104351:-1
so has part: feature:103530-104351:-1:exon
subclass of: SO_0000010

position:103530:-1
position: 103530
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:104351:-1
position: 104351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103530-104351:-1:exon

DSHI_RS20335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20335
old locus tag: Dshi_4042
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009570513.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0006629 - lipid metabolic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: sterol desaturase family protein
SIO_010081: DSHI_RS20335
subclass of: SO_0000673
so part of: DSHI_RS20335
location: complement(<103530..104351)
location: region:103530-104351:-1
so has part: feature:103530-104351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103530-104351:-1:exon

DSHI_RS20340
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20340
old locus tag: Dshi_4043
so part of: sequence
location: complement(104355..105341)
location: region:104355-105341:-1
so has part: feature:104355-105341:-1:exon
subclass of: SO_0000010

position:104355:-1
position: 104355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105341:-1
position: 105341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104355-105341:-1:exon

DSHI_RS20340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20340
old locus tag: Dshi_4043
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807997.1
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation diffusion facilitator family transporter
translation: MASHSHAGHMPSSGKALVISAWLTGVYFVIELAVGLWTGSIAVLSDAFHTLSAVGGVLVAITAQRIARRPADSTRSFGWYRAEIIGALVNGGFLLGMALLVIWMGAMRLGDPIHLATGPMLWVAFGGLVTEVVSLALMWQSSKDDLNARGALWHIIQTFVGSLLIIVTALVIEFTGFLAIDPILGMAFGVVLLWASVGVIKEAVHILMEGTPEGTDLDAVTADLNGQDGVLDVHHVHAWTLTSGKHAFSAHIRHQSPAEAADLLNRAYRRLTEQHGFHMVTLQLETECLDERHARDLDIVQIAAAKAAQEKTDVRDAHPHPSPNTEGP
SIO_010081: DSHI_RS20340
subclass of: SO_0000673
so part of: DSHI_RS20340
location: complement(104355..105341)
location: region:104355-105341:-1
so has part: feature:104355-105341:-1:exon

WP_012187043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104355-105341:-1:exon

DSHI_RS20345
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20345
old locus tag: Dshi_4044
so part of: sequence
location: complement(105343..106005)
location: region:105343-106005:-1
so has part: feature:105343-106005:-1:exon
subclass of: SO_0000010

position:105343:-1
position: 105343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106005:-1
position: 106005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105343-106005:-1:exon

DSHI_RS20345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20345
old locus tag: Dshi_4044
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008327266.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VTT domain-containing protein
translation: MMMRILLIAVFLMGVVALAFPDVLGVDIRLPDRAEIDRWIEAAGLAGPMVIVALMTIAIVASPLPSAPIALAAGAAYGHTFGTLFVVLGAELGALAAFGLARGLGRPFVERHLGQKINTGLFGSQNTLTFLVFGSRLLPFLSFDMISYAAGLSKLHLWRFALATMAGIIPASFLLAHMGNQAMNGDARTATWTALALGGFTGLSVLFAATRKTGTQGEES
SIO_010081: DSHI_RS20345
subclass of: SO_0000673
so part of: DSHI_RS20345
location: complement(105343..106005)
location: region:105343-106005:-1
so has part: feature:105343-106005:-1:exon

WP_012187042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105343-106005:-1:exon

DSHI_RS20350
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20350
old locus tag: Dshi_4045
so part of: sequence
location: complement(106009..106458)
location: region:106009-106458:-1
so has part: feature:106009-106458:-1:exon
subclass of: SO_0000010

position:106009:-1
position: 106009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106458:-1
position: 106458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106009-106458:-1:exon

DSHI_RS20350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20350
old locus tag: Dshi_4045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803357.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAQIFEKTGDHVSHHRHGDILKSPVWVGVLFVLLTMPAHLFLDEKSSIALASITLALIGGAYIGFGAADGRARVFWAELAVALLFGSAAFLGLIWHWAFLPLGLALHALWDMSHHNSYRLARIPNWYIPFCVAFDLLAATFFVLLYAVF
SIO_010081: DSHI_RS20350
subclass of: SO_0000673
so part of: DSHI_RS20350
location: complement(106009..106458)
location: region:106009-106458:-1
so has part: feature:106009-106458:-1:exon

WP_012187041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106009-106458:-1:exon

DSHI_RS20355
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20355
old locus tag: Dshi_4046
so part of: sequence
location: complement(106620..107057)
location: region:106620-107057:-1
so has part: feature:106620-107057:-1:exon
subclass of: SO_0000010

position:106620:-1
position: 106620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107057:-1
position: 107057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106620-107057:-1:exon

DSHI_RS20355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20355
old locus tag: Dshi_4046
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187040.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTELMAMFVGICAAIVMGIVHHYALSGILKFSPQRSDGSGFRIILTFSALLLLHVLELVTLAVFNTMVVASVLPQSFSNSPPMFQDVLYVTGISFSTLGYSSIEVVGPFRLLLMLQSLLGFMLLTWSATFLYSACQQVWQKAKDD
SIO_010081: DSHI_RS20355
subclass of: SO_0000673
so part of: DSHI_RS20355
location: complement(106620..107057)
location: region:106620-107057:-1
so has part: feature:106620-107057:-1:exon

WP_012187040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106620-107057:-1:exon

DSHI_RS20360
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20360
old locus tag: Dshi_4047
so part of: sequence
location: complement(107146..107619)
location: region:107146-107619:-1
so has part: feature:107146-107619:-1:exon
subclass of: SO_0000010

position:107146:-1
position: 107146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107619:-1
position: 107619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107146-107619:-1:exon

DSHI_RS20360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20360
old locus tag: Dshi_4047
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009808001.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhodanese-like domain-containing protein
translation: MALDLNRRRFVLGAHMTVLTVAASPLLAQSRSVWSAENAFDALLSDTARIIDVRTHKEWQETGVGAGVWPISMHASGFPDRLFRAKELSGDRTVGLICATGGRSASLLRALRQAGYSGYADISEGMLGSGEGPGWIASNLPTVPVDVALNGLPPALA
SIO_010081: DSHI_RS20360
subclass of: SO_0000673
so part of: DSHI_RS20360
location: complement(107146..107619)
location: region:107146-107619:-1
so has part: feature:107146-107619:-1:exon

WP_008327269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107146-107619:-1:exon

DSHI_RS20365
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20365
old locus tag: Dshi_4048
so part of: sequence
location: 107808..108530
location: region:107808-108530:1
so has part: feature:107808-108530:1:exon
subclass of: SO_0000010

position:107808:1
position: 107808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108530:1
position: 108530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107808-108530:1:exon

DSHI_RS20365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20365
old locus tag: Dshi_4048
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803380.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MGPPPHILIVDDHAQIRESVARFLEKNGMRTTVARDAVEMDAKLATGHFDLLVLDVMMPGEDGLSVCRRLAPEGDLPIIMLTALGEETDRIVGLEIGADDYLAKPFNPRELLARIKSVLRRSNRDEPVAGSLAGRKVSFAHWILDTDRQVLIDESTTETPLTTSEFKLLAVLLERARMVLSRDQLLDLTAGRTAGPMDRTIDNQISRLRRKIEPDVLRPSVIKTVRNGGYCLAADVEDAP
SIO_010081: DSHI_RS20365
subclass of: SO_0000673
so part of: DSHI_RS20365
location: 107808..108530
location: region:107808-108530:1
so has part: feature:107808-108530:1:exon

WP_007803380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107808-108530:1:exon

DSHI_RS20370
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20370
old locus tag: Dshi_4049
so part of: sequence
location: 108530..109996
location: region:108530-109996:1
so has part: feature:108530-109996:1:exon
subclass of: SO_0000010

position:109996:1
position: 109996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108530-109996:1:exon

DSHI_RS20370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20370
old locus tag: Dshi_4049
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008327277.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MRRAMRSLSGQLILLVVAALVVAQVISLFLFADERSLAIRAALGFEAAGRAANVARLIEEAPLDLQDSILRAANSPLIRFDLSDAPIVDHTGHSDGGIVEARIRALMDDSYSRDIRVELHEVEGELRPLPNLSDEMTEMHLAMMRGELTAVEMNLSIAIKGARWLNVGTRFERPPIQWPFYSMLTFGISAGLLLVAIFWFVMTRLTRPLRHLSKAADHLGRGEDVGELAVTGPTEVRDLTVAFNRMQRRLTRFVSDRTRMLAALGHDLRSPLTAMRVRAELVDEEETRDSLIASVEEMQSMVEATLTFARGLTGSEGAEVVDLRNFLDSLCSDMAAHCTFAPSDDVAVRLRPNAFRRALRNLLENAVRYGGAAKVSWATHGSNLVLNIDDNGPGIPVDQLEKVFDPFYRLEQSRSLETGGYGLGLSIARTIVQSHGGDIQLVNQNSAGLRAVVTIPLDETELIEGETDETERVDPAVAGQLARQHGAG
SIO_010081: DSHI_RS20370
subclass of: SO_0000673
so part of: DSHI_RS20370
location: 108530..109996
location: region:108530-109996:1
so has part: feature:108530-109996:1:exon

WP_009807480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108530-109996:1:exon

DSHI_RS22920
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22920
old locus tag: Dshi_4050
so part of: sequence
location: 109932..110237
location: region:109932-110237:1
so has part: feature:109932-110237:1:exon
subclass of: SO_0000010

position:109932:1
position: 109932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110237:1
position: 110237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109932-110237:1:exon

DSHI_RS22920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22920
old locus tag: Dshi_4050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020042978.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SHOCT domain-containing protein
translation: MKLNALILPLLASLPASMAQADGPGSWTGHMWGSGYGFMGGFMMLAFWGALIALVVFLVFRLRDNGTRPPDSDAQEALRRRFANGEIDEEEFRRRKATLDE
SIO_010081: DSHI_RS22920
subclass of: SO_0000673
so part of: DSHI_RS22920
location: 109932..110237
location: region:109932-110237:1
so has part: feature:109932-110237:1:exon

WP_222481198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109932-110237:1:exon

DSHI_RS20380
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20380
old locus tag: Dshi_4051
so part of: sequence
location: 110303..112303
location: region:110303-112303:1
so has part: feature:110303-112303:1:exon
subclass of: SO_0000010

position:110303:1
position: 110303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112303:1
position: 112303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110303-112303:1:exon

DSHI_RS20380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20380
old locus tag: Dshi_4051
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803387.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heme lyase CcmF/NrfE family subunit
translation: MVPEIGHFALALALALALVQSVLPIAGASRRNAVWMKSAQATAIGQVLFVAIAFAALMQAFIVSDFTVRNVVENSHSLKPMLYKVAGTWGSHEGSLLLWILILAVFGAGVAWFGSNIPAETKARTLSVQAWISVGFLSFLLLTSNPFERVFPPPLDGNDLNPLLQDMGLAMHPPLLYFGYVGFSIVFSFAVAALLEGRVDPAWARWVRPWTLAAWVSLTAGIALGSWWAYYELGWGGWWFWDPVENVSFMPWLLGTALLHSAIVTEKRDAFKSWTILLAILTFSLSLLGTFIVRSGLLTSVHAFAVDPERGLYILGLLAVSIGGSLALYAWRAPEMEPGGLFRPISREAGLLVNNLILAAATGTVLFGTLYPLILEAVTGDKISVGPPFFNAAFIPMMLALVVFMGLGPFLSWKRADIAGLLDRIQFVAVLAVIAALAAWYLLNGGPIMAYLAILGAAWLLFATLREWALRIRLFEVSLAESARRVRNLPRASHGMTLAHAGVAVLMMGMIGSTGWKSEEIVFAAPGTEVTIAGFDITFEGAAKVQGPNYIADRGTLVVRRDGELVTTLFPERRYYPVAESQTTESAIRSTLAGDLYTSIATPASDQVNNAGAWTLRILYEPLVNLIWIGSILLVIGGCLSLSDRRLRVGAPRRAKQPATDAVPAE
SIO_010081: DSHI_RS20380
subclass of: SO_0000673
so part of: DSHI_RS20380
location: 110303..112303
location: region:110303-112303:1
so has part: feature:110303-112303:1:exon

WP_012187039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110303-112303:1:exon

DSHI_RS20385
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20385
old locus tag: Dshi_4052
so part of: sequence
location: 112312..112878
location: region:112312-112878:1
so has part: feature:112312-112878:1:exon
subclass of: SO_0000010

position:112312:1
position: 112312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112878:1
position: 112878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112312-112878:1:exon

DSHI_RS20385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20385
old locus tag: Dshi_4052
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009808006.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
GO process: GO:0017004 - cytochrome complex assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DsbE family thiol:disulfide interchange protein
translation: MKRLIAGLPFIAAVIFGGFFLWGLNPDRDPNEIPSVLISQPAPAFDLDPVPGLETPGLARSDLVGNERPVVVNVFASWCVPCRAEHAVLTRFVERDGMRLFGINYKDKPEDAVKWLNDLGNPYERIGSDLSGRTGIEWGLSGVPETFIVDSDGTVLFRYVGPVVGPDAVERFTQALKQAGALPNGAGS
SIO_010081: DSHI_RS20385
subclass of: SO_0000673
so part of: DSHI_RS20385
location: 112312..112878
location: region:112312-112878:1
so has part: feature:112312-112878:1:exon

WP_009807483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112312-112878:1:exon

DSHI_RS20390
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20390
old locus tag: Dshi_4053
so part of: sequence
location: 112875..113348
location: region:112875-113348:1
so has part: feature:112875-113348:1:exon
subclass of: SO_0000010

position:112875:1
position: 112875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113348:1
position: 113348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112875-113348:1:exon

DSHI_RS20390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20390
old locus tag: Dshi_4053
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803391.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c-type biogenesis protein CcmH
translation: MRQLIFAFCIGLLPFAANAVEPDEMLTDPVLEQRAREISKDLRCVVCQNQDIDSSNAGVARDLRLLVRERLVVGDSDAEVIEYIRARYGDYVLLKPPLEPATYALWFAPIAFVLIGVFVGGGLLMSRRKQEAFEDLGSEDENTVSEILRQNEAGDAS
SIO_010081: DSHI_RS20390
subclass of: SO_0000673
so part of: DSHI_RS20390
location: 112875..113348
location: region:112875-113348:1
so has part: feature:112875-113348:1:exon

WP_009807484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112875-113348:1:exon

DSHI_RS20395
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: ccmI
locus tag: DSHI_RS20395
old locus tag: Dshi_4054
so part of: sequence
location: 113345..114496
location: region:113345-114496:1
so has part: feature:113345-114496:1:exon
subclass of: SO_0000010

position:113345:1
position: 113345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114496:1
position: 114496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113345-114496:1:exon

DSHI_RS20395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: ccmI
locus tag: DSHI_RS20395
old locus tag: Dshi_4054
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009808008.1
GO function: GO:0051082 - unfolded protein binding [Evidence IEA]
GO process: GO:0017004 - cytochrome complex assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: c-type cytochrome biogenesis protein CcmI
translation: MIWGIFVLLTLVAIGIVLYPLLLSKSNTLTRGDAVPAILADQMREIQRDMDRGLISEQEAQAARLEIKKRILATTRNSEEKAGSSRNGGRVTLVVAAVLAPVIAAGYYLTMGSPEVPSMAFAARAEERAQTDEVTALAIQLRERLVSDPTGGPSEGWMLLGQTYQRMGRAADAVEAFEVVAEREDATSATFSMLAEAVAVANDGVVIPRAKLAIDRALDLDPSNPAATYFESLYYFQQEETRKAYDLLVSRLNQEEAYVPWMETYAAQINRIAAAADLPVVNLPSGPTSQPGPSAADVAAASEMNDADRAEFIRSMVSRLAERLEDEPDDLDGWMRLANAYTVLQEPDRAVEAYRKAEALLEQQPASDPRRAAVRAALERLGG
SIO_010081: DSHI_RS20395
subclass of: SO_0000673
so part of: DSHI_RS20395
location: 113345..114496
location: region:113345-114496:1
so has part: feature:113345-114496:1:exon

WP_008327282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113345-114496:1:exon

DSHI_RS20400
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20400
old locus tag: Dshi_4055
so part of: sequence
location: complement(114525..116654)
location: region:114525-116654:-1
so has part: feature:114525-116654:-1:exon
subclass of: SO_0000010

position:114525:-1
position: 114525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116654:-1
position: 116654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114525-116654:-1:exon

DSHI_RS20400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20400
old locus tag: Dshi_4055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803395.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein-disulfide reductase DsbD family protein
translation: MIDCLLILRRVLLIPFVLLAVVSGSVAAATSAEYQSAPLTAHLISVQDGVPENTQTLSAGLHLQLNENWKTYWRSAGEVGIPPSVEWSGSENVADVEFMWPAPTRFTAFGIENFGYAGEVVFPLRITLKDPGAPVTLSAQVKLLVCSNVCVPEEFDLSLRLGRGNVIDSTSAGLIGTFSERVPEGAKTSGVSEANAFIDEDLTELIVSLRVDEPLQSPDVFPELGMGVALGKPDIRLGEEDRLLWARLPILSSNTDVTVAPSITVTDGENRAFTIIADRVAQGIAPPFELAATTPDMMELIWIAAIALLGGLILNVMPCVLPVLSIKVSSVLKHTDHDTTRVRFGFVAASAGIMTFMWGLALVLWALQTAGLSVGWGLQFQSPLFLAAMIAVLLVFSANLFGAFEFALPHGMQTRLAGAGGRNGYSADFFTGMFGAVMATPCSAPFLGTAVAFALAGRGVDILIVFTSLGLGLALPYLVIAAFPRLVAFMPKPGRWMLIIKSVMGVLLLATAVWLFWVLDGVAGLASVIAVAALSGLAVLILSLPNVQSQFRWSIAIASLVLAIAAGPLLQQSAPARSTPQLAMAWIAFDRSEIAKRVSAGEVVFVDVTADWCLTCKANKTLIIDREPVRSALEAPGVTAMQADWTRPDTRISRYLESFGRYGIPFNAVYGPSAPNGIVLSELLKTEDVMNALAQASGRDVSAKVAGQE
SIO_010081: DSHI_RS20400
subclass of: SO_0000673
so part of: DSHI_RS20400
location: complement(114525..116654)
location: region:114525-116654:-1
so has part: feature:114525-116654:-1:exon

WP_009807485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114525-116654:-1:exon

DSHI_RS20405
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20405
old locus tag: Dshi_4056
so part of: sequence
location: complement(116938..117240)
location: region:116938-117240:-1
so has part: feature:116938-117240:-1:exon
subclass of: SO_0000010

position:116938:-1
position: 116938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117240:-1
position: 117240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116938-117240:-1:exon

DSHI_RS20405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20405
old locus tag: Dshi_4056
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008327290.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2933 domain-containing protein
translation: MDDENPKNKPITDKLMHYGMMACCIVMLLPVIGFFLAGGTLAGMWGNASAFAPLLLCVGAHLVMHRFMGKSCHSDKANDTIEEAPEPISSVIPSVARNRQ
SIO_010081: DSHI_RS20405
subclass of: SO_0000673
so part of: DSHI_RS20405
location: complement(116938..117240)
location: region:116938-117240:-1
so has part: feature:116938-117240:-1:exon

WP_007803398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116938-117240:-1:exon

DSHI_RS20410
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20410
old locus tag: Dshi_4057
so part of: sequence
location: 117396..117956
location: region:117396-117956:1
so has part: feature:117396-117956:1:exon
subclass of: SO_0000010

position:117396:1
position: 117396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117956:1
position: 117956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117396-117956:1:exon

DSHI_RS20410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20410
old locus tag: Dshi_4057
EC number: 2.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807486.1
GO function: GO:0042834 - peptidoglycan binding [Evidence IEA]; GO:0071972 - peptidoglycan L,D-transpeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L,D-transpeptidase
translation: MTTSRNNKINRRSLLGYAAVALVAPSVVRAETIRRNISSFRVHDWQDHFDTLGKGIIISDTVTMALQHWTADGEMRIYPTSVPLTDELTKRGYTEVVEKRKNPSWAPTPSMRERNPEWPARIEGGDPDNPLGTRALYLSWQYYRIHGTQDTRKIGRRSSNGCIGLFNEQIEEVYERAPVGTQVKLI
SIO_010081: DSHI_RS20410
subclass of: SO_0000673
so part of: DSHI_RS20410
location: 117396..117956
location: region:117396-117956:1
so has part: feature:117396-117956:1:exon

WP_009807486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117396-117956:1:exon

DSHI_RS20415
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20415
old locus tag: Dshi_4058
so part of: sequence
location: 117985..118443
location: region:117985-118443:1
so has part: feature:117985-118443:1:exon
subclass of: SO_0000010

position:117985:1
position: 117985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118443:1
position: 118443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117985-118443:1:exon

DSHI_RS20415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20415
old locus tag: Dshi_4058
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803401.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c
translation: MDKLTALIGAVFVIGGGFAVWQFVGAEDLAVGHSMTPPDTSEIAEGDPIVQVQLPDALSQQAALGKNIFEAKCSECHGENAAGRNGVAPPLVHKIYEPSHHSDMAFVLAAQNGVRAHHWNFGNMPKIEGLTQGDVKMVAAYVRELQRANGIN
SIO_010081: DSHI_RS20415
subclass of: SO_0000673
so part of: DSHI_RS20415
location: 117985..118443
location: region:117985-118443:1
so has part: feature:117985-118443:1:exon

WP_007803401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117985-118443:1:exon

DSHI_RS20420
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20420
old locus tag: Dshi_4059
so part of: sequence
location: 118813..119406
location: region:118813-119406:1
so has part: feature:118813-119406:1:exon
subclass of: SO_0000010

position:118813:1
position: 118813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119406:1
position: 119406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118813-119406:1:exon

DSHI_RS20420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20420
old locus tag: Dshi_4059
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803403.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c
translation: MKKTTIVAAVLIAGTAVTAFAHSGATGIVKERMDAMLAMGKAVKTVAPMMRGETAYDAETVRDAARLFQQHAGESMTKLFPEGTGGMPSEAKDEVWTDWERFAALASQLEEYSEGLERAADNGLGGMSGNTSMDGASMMGGGSMMGGDTTMMGGSTMMGRGDMMDAAAIAEMPADAAFAMTTQVCSACHERFRAEED
SIO_010081: DSHI_RS20420
subclass of: SO_0000673
so part of: DSHI_RS20420
location: 118813..119406
location: region:118813-119406:1
so has part: feature:118813-119406:1:exon

WP_007803403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118813-119406:1:exon

DSHI_RS20425
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20425
old locus tag: Dshi_4060
so part of: sequence
location: 119409..120326
location: region:119409-120326:1
so has part: feature:119409-120326:1:exon
subclass of: SO_0000010

position:119409:1
position: 119409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120326:1
position: 120326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119409-120326:1:exon

DSHI_RS20425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20425
old locus tag: Dshi_4060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803405.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c
translation: MRRFLTLVSGAAVLGAASLGVVIAWPVGSAVTPIAIEGNVDRGAYLARASGCIACHTNFEAGGAPLAGGAPLETPFGTFYPPNLTTDPEHGMGEWTAEQFAKAVRQGIGPDGTPYYPSFPYTFYADFSDQDIADLWAAFQTVPPVDEPAPENDVSFPFDQRWGLKLWRAAFFYDPDTEPIEGRSDAWNRGRELVRGAAHCGACHTPRNLAGGRDIGASFAGNAQLPGGSKAPAIRPKDLVKNDWTVSNLAYALQTGITPSGDAFGGSMAEVVREGTRFLTPADREAMALFLLNKDTVEAENPASN
SIO_010081: DSHI_RS20425
subclass of: SO_0000673
so part of: DSHI_RS20425
location: 119409..120326
location: region:119409-120326:1
so has part: feature:119409-120326:1:exon

WP_007803405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119409-120326:1:exon

DSHI_RS20430
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20430
old locus tag: Dshi_4061
so part of: sequence
location: 120370..121764
location: region:120370-121764:1
so has part: feature:120370-121764:1:exon
subclass of: SO_0000010

position:120370:1
position: 120370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121764:1
position: 121764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120370-121764:1:exon

DSHI_RS20430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20430
old locus tag: Dshi_4061
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803406.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multicopper oxidase family protein
translation: MRQTRRDFLRHATLAACAAAIPQSAFAATPFEDLIAKVARRQLLPDTYPETEIWGYDGLVPAPEIRVTQGDRVRRRFRNEVPDPSSVHWHGIRIDNAMDGVSGLTQEAVAPGGTFDYDFVVPDAGTYWYHAHNRSYEQVARGLRGALIVEEVDGPDIDREEVIVLEDWLLDPESGQLFDNFEQPMMMSHGGRTGNFITTNGRYDLTLPAQRNERIRLRIINAASARIFPLRLSGFSGWTVAVDGMPTGQPQSVDGELILGPAQRVDLIVDVTEDEGGTAQLLRIGDDDQLTPLVSFLVNGTASSVPRGKPLPLPPNPAAHAPDLADARDLRLVMSGGAMGRMQSALLGGERLGFRQLAQAGKFWALNDVAEMTYTPLADLSLNEPVRLKIENQTVFPHAMHLHGMHFRELRPDGAFGPMRDTILLAGNESREIAFTADNPGKWLFHCHMLSHAASGMTTWIRVT
SIO_010081: DSHI_RS20430
subclass of: SO_0000673
so part of: DSHI_RS20430
location: 120370..121764
location: region:120370-121764:1
so has part: feature:120370-121764:1:exon

WP_007803406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120370-121764:1:exon

DSHI_RS20435
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20435
old locus tag: Dshi_4062
so part of: sequence
location: 121761..122243
location: region:121761-122243:1
so has part: feature:121761-122243:1:exon
subclass of: SO_0000010

position:121761:1
position: 121761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122243:1
position: 122243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121761-122243:1:exon

DSHI_RS20435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20435
old locus tag: Dshi_4062
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008327301.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c
translation: MRYLVWSLPITVAAAAFTYWLSTSASSDVGSASRAESYDIEEGALLYAENCASCHGAGLEGQPEWRTPGADGRLPAPPHDETGHTWHHPDSLLFDYTKLGGAALLARQGVEFDSGMPGFADVLTDQQIHNILAFIRSTWPDRIREVQAARTEADEQRGEN
SIO_010081: DSHI_RS20435
subclass of: SO_0000673
so part of: DSHI_RS20435
location: 121761..122243
location: region:121761-122243:1
so has part: feature:121761-122243:1:exon

WP_007803408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121761-122243:1:exon

DSHI_RS20440
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20440
old locus tag: Dshi_4063
so part of: sequence
location: 122245..122976
location: region:122245-122976:1
so has part: feature:122245-122976:1:exon
subclass of: SO_0000010

position:122245:1
position: 122245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122976:1
position: 122976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122245-122976:1:exon

DSHI_RS20440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20440
old locus tag: Dshi_4063
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009807488.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DsbA family protein
translation: MRFRQAFTTVAIAALLPIPALADELSESRVKELVLEAIRENPEIVMEAVAILEQRQAQAQELSQAQVLNDQRDLIENDPNAPVLGNLEGDVTVVEFFDYNCPYCRRVKPEVRALIEDDPNIRLVYREWPILGDGSVFAAKAALAARKQDKYEEFHWAMMGLEGRAEEASVLRVAEEIGLDIAQLRKDMEAPEVEEHIATSMQLTQALGFNGTPSFVIGDALVPGFVEKAQLADLVEEARKVED
SIO_010081: DSHI_RS20440
subclass of: SO_0000673
so part of: DSHI_RS20440
location: 122245..122976
location: region:122245-122976:1
so has part: feature:122245-122976:1:exon

WP_009807488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122245-122976:1:exon

DSHI_RS22040
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22040
old locus tag: Dshi_4064
so part of: sequence
location: complement(123019..123219)
location: region:123019-123219:-1
so has part: feature:123019-123219:-1:exon
subclass of: SO_0000010

position:123019:-1
position: 123019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123219:-1
position: 123219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123019-123219:-1:exon

DSHI_RS22040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22040
old locus tag: Dshi_4064
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803412.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy-metal-associated domain-containing protein
translation: MKFSVPDMSCGHCTAAIESAVKSADPNAGVECDLSARQVHVDSVLPADQVQAIIRDAGYNVEPAAA
SIO_010081: DSHI_RS22040
subclass of: SO_0000673
so part of: DSHI_RS22040
location: complement(123019..123219)
location: region:123019-123219:-1
so has part: feature:123019-123219:-1:exon

WP_007803412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123019-123219:-1:exon

DSHI_RS20445
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS20445
old locus tag: Dshi_4065
so part of: sequence
location: 123373..125883
location: region:123373-125883:1
so has part: feature:123373-125883:1:exon
subclass of: SO_0000010

position:123373:1
position: 123373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125883:1
position: 125883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123373-125883:1:exon

DSHI_RS20445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS20445
old locus tag: Dshi_4065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187038.1
GO function: GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MPEPKQISLPIEGMSCASCVGRVDRALNAIDGVEDVSVNLASETARMSVDALKRIPDIIESLRELGYPARKARAELTIAAMSCASCVGRVDKALAAVPGVVEVNVNLASETATVVYVEGLVTTSDLIESSGAAGYPATVATAQAGDDRVARKEEEAQALAKRVTFAAILALPVFLIEMGGHVIPAVHMLIETTIGQQTSWLLQFVLTTIVLFGPGRTFYTKGFPALFRGAPDMNSLVAVGTGAAYLYSVVATFVPSVLPDTLRTVYFEAAAVIVVLILLGRFLEARAKGRTGAAIQKLLGLQARTARVMRDGESVEIEIDALVQGDIVIVRPGERIAVDGEVIEGTSRVDESMLTGEPIPAEKGAGDTVTGGTVNGAGSLQFLATRVGADTTLAQIIRIVEEAQGAKLPIQGLVDRITLWFVPAVMAIAAATVLVWLFFGPDPALTMALVAGVSVLIIACPCAMGLATPTSIMVGTGRAAEMGVLFRKGDALQQLDSVDVVALDKTGTVTEGRPALTDLVLAEGFDRPTTLSKIAAVESLSEHPVADAIVRAARAEGAPLVAAEGFQSVTGYGVRAVVEDVEVLVGADRYMAREGIDVSALAPEETKIASKGRTALYAAIDGRVAAVIGVADPVKPASRAAIAALHEKGLAVAMITGDKRETAEAIARETGIDHVIAGVLPDGKVAALDSLRQGNKRIAFVGDGINDAPALAHADVGIAIGTGTDVAIESADVVLMSGDLRGVVNAFEVSRRTMRNIRQNLFWAFAYNVALIPVAAGVLYPAFGLLLSPILAAGAMALSSVFVLTNALRLRRIAPAMDEQRAIPAELAAATPAPAE
SIO_010081: DSHI_RS20445
subclass of: SO_0000673
so part of: DSHI_RS20445
location: 123373..125883
location: region:123373-125883:1
so has part: feature:123373-125883:1:exon

WP_012187038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123373-125883:1:exon

DSHI_RS20450
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: cueR
locus tag: DSHI_RS20450
old locus tag: Dshi_4066
so part of: sequence
location: 125896..126294
location: region:125896-126294:1
so has part: feature:125896-126294:1:exon
subclass of: SO_0000010

position:125896:1
position: 125896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126294:1
position: 126294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125896-126294:1:exon

DSHI_RS20450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: cueR
locus tag: DSHI_RS20450
old locus tag: Dshi_4066
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007803416.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006878 - cellular copper ion homeostasis [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Cu(I)-responsive transcriptional regulator
translation: MNIGDVARQSGVPPKTIRYYEDIGLIRPNRSENGYRAFTESHIHKLAFLGRARALGFTIEDCRTLLSLYEDENRESMQVKAVAEDHLRQIEEKIAKLQSMRATLAELVEKCAGDHRPDCPIIEDLSPERLAK
SIO_010081: DSHI_RS20450
subclass of: SO_0000673
so part of: DSHI_RS20450
location: 125896..126294
location: region:125896-126294:1
so has part: feature:125896-126294:1:exon

WP_007803416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125896-126294:1:exon