Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI02, complete sequence.
type: Entry
definition: Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI02, complete sequence.
sequence version: NC_009956.1
sequence date: 2023-05-02
sequence: sequence
division: CON
label: NC_009956.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02598387
keyword: RefSeq
source: Dinoroseobacter shibae DFL 12 = DSM 16493
organism: Dinoroseobacter shibae DFL 12 = DSM 16493
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Dinoroseobacter.
reference: 1
reference: 2
reference: 3
reference: 4
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP000832.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4002768\nSource DNA and bacteria available from Irene Wagner-Dobler\n(Irene.Wagner-Doebler@helmholtz-hzi.de)\nContacts: Irene Wagner-Dobler\n(Irene.Wagner-Doebler@helmholtz-hzi.de)\n Paul Richardson (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/02/2023 02:01:02\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,328\nCDSs (total) :: 4,274\nGenes (coding) :: 4,219\nCDSs (with protein) :: 4,219\nGenes (RNA) :: 54\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 44\nncRNAs :: 4\nPseudo Genes (total) :: 55\nCDSs (without protein) :: 55\nPseudo Genes (ambiguous residues) :: 0 of 55\nPseudo Genes (frameshifted) :: 20 of 55…

sequence
subclass of: SO_0000155
sequence length: 152970
topology: circular
so has quality: SO_0000988
location: 1..152970
location: region:1-152970:1
RO_0002162: 398580

NC_009956
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02598387
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of chromosome of Dinoroseobacter shibae DFL 12
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Thompson, L.S.
author: Brettin, T.
author: Bruce, D.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Kim, E.
author: Richardson, P.
journal: Unpublished

2
title: The Roseobacter - microalgae symbiosis: Adaptation to viral pressure, horizontal gene transfer, and ability to synthesize vitamine B12 under all conditions are revealed by the genome sequence
author: Liesegang, H.
author: Wagner-Doebler, I.
journal: Unpublished

3
title: Direct Submission
author: Liesegang, H.
author: Wagner-Doebler, I.
journal: Submitted (06-JUL-2009) HZI-Braunschweig, Braunschweig, Germany
comments: Protein update by submitter

4
title: Direct Submission
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Barry, K.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Thompson, L.S.
author: Brettin, T.
author: Bruce, D.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Kim, E.
author: Richardson, P.
journal: Submitted (21-SEP-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152970:1
position: 152970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-152970:1:source
so part of: sequence
organism: Dinoroseobacter shibae DFL 12 = DSM 16493
mol type: genomic DNA
strain: DFL 12
type material: type strain of Dinoroseobacter shibae
plasmid: pDSHI02

398580
type: Taxonomy
SIO_000068: taxonomy

DSHI_RS19135
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19135
old locus tag: Dshi_3792
so part of: sequence
location: 167..1822
location: region:167-1822:1
so has part: feature:167-1822:1:exon
subclass of: SO_0000010

position:167:1
position: 167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1822:1
position: 1822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167-1822:1:exon

DSHI_RS19135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19135
old locus tag: Dshi_3792
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012115356.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MRTRFWATTAAATMAAVLASGSAWAESVLTIGMTAADIPRTSGQPDQGFEGNRFTGIPMYDALTHWDLSSETEASVVIPGLATEWSVNPDDTTKWTFKLREGVTFHDGSPFNAEAVVWNVEKVLDDEAPHFAPDQVGATASRMPTLRSARAIDELTVELTTSQPDAFLPLNMTMLFMASPTHWQSLYDAVDAGVTDPTERAAAAWTAFAANPSGTGPFKGETLVPRERFEMVRNENYWDPARTPTIDRVVLVPLPDANARTAALLSGQVDWIEAPAPDVIPRIESQGNVIYANPQPHVWPWQLSFVEDSPWLDKRVRHAANLCVNREELRVLLGGYMGVPQGTVNEGHPWWGNPSFEIKYDPDAARALMEEAGFGPDNPLSVTVQTSASGSGQMQPVTMNEYVQQNLAECHFDVNLDVIEWNTLFNNWRAGAKSEGARDADAINVSFATMDPFFAMVRFVSTETFPPVSNNWGFFGNDEFDALIAEARTSFDDADRDAALARLHARVVEEAPFVWIANDVGPRAMSPRVGNVVQPKSWFIDIAPMTLDDDT
SIO_010081: DSHI_RS19135
subclass of: SO_0000673
so part of: DSHI_RS19135
location: 167..1822
location: region:167-1822:1
so has part: feature:167-1822:1:exon

WP_012187185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167-1822:1:exon

DSHI_RS19140
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19140
old locus tag: Dshi_3793
so part of: sequence
location: 1905..2858
location: region:1905-2858:1
so has part: feature:1905-2858:1:exon
subclass of: SO_0000010

position:1905:1
position: 1905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2858:1
position: 2858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1905-2858:1:exon

DSHI_RS19140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19140
old locus tag: Dshi_3793
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012746005.1
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MLTFLIRRVAYTIPIMLGVSLVCFALVHISPGDPLVSILPPDASVELQQQLMAIYGFDRSYPEQFIRWLGRAVQGDLGNSIATGRPVTAEVLNAVGNTLILAVTATIIGFTFGGLFGFVAGYFRDSWIDKLASTISVVGVSIPHYWLGMVLVIIFSVQLGWLPATGAGPRGSSEWAFDWEHLQYLILPAVTMSVIPMGIVARTVRALVADILQQEYVTGLRAKGLLDRGVLAHVIKNAAPTALAVMGLQLGYLLGGSILIETVFSWPGTGFLLGQAIFQRDLPLLQGTILVLAMFFVILNLLVDVAQSALDPRLQRS
SIO_010081: DSHI_RS19140
subclass of: SO_0000673
so part of: DSHI_RS19140
location: 1905..2858
location: region:1905-2858:1
so has part: feature:1905-2858:1:exon

WP_012187186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1905-2858:1:exon

DSHI_RS19145
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19145
old locus tag: Dshi_3794
so part of: sequence
location: 2862..3749
location: region:2862-3749:1
so has part: feature:2862-3749:1:exon
subclass of: SO_0000010

position:2862:1
position: 2862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3749:1
position: 3749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2862-3749:1:exon

DSHI_RS19145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19145
old locus tag: Dshi_3794
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007813805.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MAVTASEISLIAQAEKPEGYWRSVGRRFMRDKVAVGAGLVAGGLILMAVFAPWIAPQDPLDGSMMDRLSPIGTEGYPLGADELGRDMLSRLIYGARLSLFMGVTPVLIAFFIGSAIGIAAGYAGGWVNSATMRVLDVLYAFPSVLLAIAISGALGAGIANGLLSLTVVFIPPIARVAESVTTAVRELEYVEAAKASGASALSIVRHHVLGNVLGPIFVYATSLISVSMILAAGLSFLGLGVSPPNAEWGLMLNTLRNAIYVQPWLAALPGVMIFLTSISFNMLSDGLRSAMDIKQ
SIO_010081: DSHI_RS19145
subclass of: SO_0000673
so part of: DSHI_RS19145
location: 2862..3749
location: region:2862-3749:1
so has part: feature:2862-3749:1:exon

WP_012187187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2862-3749:1:exon

DSHI_RS19150
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19150
old locus tag: Dshi_3795
so part of: sequence
location: 3746..4741
location: region:3746-4741:1
so has part: feature:3746-4741:1:exon
subclass of: SO_0000010

position:3746:1
position: 3746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4741:1
position: 4741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3746-4741:1:exon

DSHI_RS19150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19150
old locus tag: Dshi_3795
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019966206.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MTKQDTSGAVLSAHNLVKHFPLGGWGKNRRVVRAVDDVTFEVAPGETLGVVGESGCGKSTTARLLVQLLGADSGEVRFQGHVAGTEMPLKEFRRHVQMVFQDSYASLNPRMSMLDAIAFGPTVHGVSEAEAQRIARDLLDRVGLDPSRFGPRYPHELSGGQRQRVNIARALAFQPEVIVLDEAVSALDKSVEAQVLNLLMDLKRERNLTYVFISHDLNVVRHVSDRVMVMYLGEVAEIGPTAEMYADPRHPYTRALLAAMPSLDPDRRTTEAPLSGDPPNPIDPPSGCRFHTRCAEAFGACSAQRPSNLRVGAGHYASCHLNDPKMREAAA
SIO_010081: DSHI_RS19150
subclass of: SO_0000673
so part of: DSHI_RS19150
location: 3746..4741
location: region:3746-4741:1
so has part: feature:3746-4741:1:exon

WP_012187188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3746-4741:1:exon

DSHI_RS19155
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19155
old locus tag: Dshi_3796
so part of: sequence
location: 4738..5739
location: region:4738-5739:1
so has part: feature:4738-5739:1:exon
subclass of: SO_0000010

position:4738:1
position: 4738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5739:1
position: 5739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4738-5739:1:exon

DSHI_RS19155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19155
old locus tag: Dshi_3796
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011156322.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MTHPLVEMTDVTVRFDGTPPVHAVNGVSFKLAPGEVLGILGESGSGKSVTLKTLLRLLPEKKTRIGGQVRVDGQDVLALNGRALADHRGGVVSMIFQDPALALDPVYTIGQQIAESVVRHEGLSQRDAMARALEMLELVRIPSAKRRLKAYPHEMSGGMRQRAMIALALACKPKLLLADEPTTALDATVQIQVLLLLRELQKEMGMGVIFVTHDIGVAVEVSDRLAVMYAGSFVETGSVAEIIRDGRHPYTKGLLAANLVGAEPGTPLEAIPGAPPALHAPPVGCAFAPRCDRAREACASDPLPVWTQGPDRWARCVAAVEDARPSGQVSAAK
SIO_010081: DSHI_RS19155
subclass of: SO_0000673
so part of: DSHI_RS19155
location: 4738..5739
location: region:4738-5739:1
so has part: feature:4738-5739:1:exon

WP_012187189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4738-5739:1:exon

DSHI_RS19160
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19160
old locus tag: Dshi_3797
so part of: sequence
location: 5742..6419
location: region:5742-6419:1
so has part: feature:5742-6419:1:exon
subclass of: SO_0000010

position:5742:1
position: 5742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6419:1
position: 6419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5742-6419:1:exon

DSHI_RS19160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19160
old locus tag: Dshi_3797
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008885454.1
GO function: GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO process: GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate/glutamate racemase family protein
translation: MRLAILNPNATRTMTDDMVTAARAAVPTDVEVVGYTNLAGPPAIQGAEDALACLPGLFALYDTALAEGATGVVVGCFDDTGLAELRARCAGPIAGLGEAGCLAASLHRAEFAVLTTTEGSVPVIADNIDLMGLAPRCRGVVAAGVPVLGLAAGLPQLRATLAGLLETAPEAAVVLGCAGMSPLAGQIAEGVDVPIIDPVLAATALVLSAARAAQRDPATSLERSA
SIO_010081: DSHI_RS19160
subclass of: SO_0000673
so part of: DSHI_RS19160
location: 5742..6419
location: region:5742-6419:1
so has part: feature:5742-6419:1:exon

WP_044029450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5742-6419:1:exon

DSHI_RS19165
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19165
old locus tag: Dshi_3798
so part of: sequence
location: complement(6416..6958)
location: region:6416-6958:-1
so has part: feature:6416-6958:-1:exon
subclass of: SO_0000010

position:6416:-1
position: 6416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6958:-1
position: 6958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6416-6958:-1:exon

DSHI_RS19165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19165
old locus tag: Dshi_3798
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013067202.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CIA30 family protein
translation: MRHLLAALLILLAPMAQSEAPMTDDFTAQPETRWRFFTDGVMGGVSEGQVAFLTEAGVPFARMTGQVSTANRGGFIQMRRDLPEAAPETATGIRLVARGNDQRYFVHLRTRGSRLPWQYYQAGFEVAGDWAEIRLPFADFVPSGRMLRALPRPESLTSIAIAAFGRDHAARVDIREIGVY
SIO_010081: DSHI_RS19165
subclass of: SO_0000673
so part of: DSHI_RS19165
location: complement(6416..6958)
location: region:6416-6958:-1
so has part: feature:6416-6958:-1:exon

WP_012187191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6416-6958:-1:exon

DSHI_RS19170
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19170
old locus tag: Dshi_3799
so part of: sequence
location: 7084..7680
location: region:7084-7680:1
so has part: feature:7084-7680:1:exon
subclass of: SO_0000010

position:7084:1
position: 7084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7680:1
position: 7680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7084-7680:1:exon

DSHI_RS19170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19170
old locus tag: Dshi_3799
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009806178.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HupE/UreJ family protein
translation: MLHRVLPAVLAVLILVSLSAMPALAHETHGHGGGFVAGFTHPILGWDHVAAMVAVGLWGAFLGAPAIWILPVVFPLVMALGAVLGIAGVPVPAIETGIALSAVVLGLMIAFVVRPPLWVAAVIVGLFAVFHGYAHGTELPGTVNAFAYAVGFVISTGLLHMIGIAFGLAIKWPAGRMAVRGAGGLISIAGVAFLTGMA
SIO_010081: DSHI_RS19170
subclass of: SO_0000673
so part of: DSHI_RS19170
location: 7084..7680
location: region:7084-7680:1
so has part: feature:7084-7680:1:exon

WP_012187192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7084-7680:1:exon

DSHI_RS19175
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19175
old locus tag: Dshi_3800
so part of: sequence
location: 7685..8299
location: region:7685-8299:1
so has part: feature:7685-8299:1:exon
subclass of: SO_0000010

position:7685:1
position: 7685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8299:1
position: 8299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7685-8299:1:exon

DSHI_RS19175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19175
old locus tag: Dshi_3800
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLATWGVWLFGLGVAGPARAHSPAPGVEGFFLGLAHPFSTPGQVVVILALALVVGGFATRLVPWMLGVFFAAGFASLLPGPVLAALEVPLFAVGLVAAVAAASLPGQGAAVAFGLLVLGGGLIGQASIPGPGPVQDRIVTMAGAITGASLGLAYGVGLLVVLREKMRAPWVAIGLRVLAAWIAAVAALMLALVFAPGAEVAPL
SIO_010081: DSHI_RS19175
subclass of: SO_0000673
so part of: DSHI_RS19175
location: 7685..8299
location: region:7685-8299:1
so has part: feature:7685-8299:1:exon

WP_012187193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7685-8299:1:exon

DSHI_RS19180
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: katG
locus tag: DSHI_RS19180
old locus tag: Dshi_3801
so part of: sequence
location: complement(8358..10535)
location: region:8358-10535:-1
so has part: feature:8358-10535:-1:exon
subclass of: SO_0000010

position:8358:-1
position: 8358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10535:-1
position: 10535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8358-10535:-1:exon

DSHI_RS19180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: katG
locus tag: DSHI_RS19180
old locus tag: Dshi_3801
EC number: 1.11.1.21
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187194.1
GO function: GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO process: GO:0006979 - response to oxidative stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: catalase/peroxidase HPI
translation: MDGNDLRNVTGCPVMHGGNTGMNTSPVRWWPNALNLDILHQHGARVSPMDPDYDHREAVKALDFQGVWDDVDKLLTDSQDWWPADWGHYGGLFIRLSWHAAGSYRLGDGRGGAGTGNLRFEPLNSWPDNASLEKARRLLWPVKKKYGNALSWADLLVLAGTVAYSNMGLKTFGFAFGRKDIWGPEIDINWGSDSEILAPTDERVTDVADANSMANPLAASHMGLIYVNPEGVNGTPDPAQTAKYVRMTFARMAMNDEETAALTVGGHTVGKAHGGTMADKVGADPAGCPVHMQGFGWENPGFDGNANTAHTSGLEGAWTSNPTQWDNGYLELLFKYDWEVTKSRAGAFQWEPVNIAEEDMVPDATDPSIKHNPIMTDADMAMKVDPIYREICERFHKDPDYLADTFARAWFKLTHRDMGPKANYYGPFVPQEDLIWQDPIPEGPTGYDVDALKAKIAESGLSAAEMIATAWDSARTFRGSDMRGGANGARIRLVPQKDWAGNEPERLAKVLGILEPLAAAAGASIADTIVLAGNVGIEMAIKAAGQDVPVPFAPGRGDATDAMTDAESFEVMEPFADGFRNWSKERYSVSPEELMLDRAQLLGLTAAEMAVLVGGLRVLGANHGGSAHGVFTDRVGTLTTDFFQTITDMAYKWVPLDDGTYEIRDRKSGDTVYTATSADLVFGSNSQLRAIAEVYAQDDNETKFVRDFVAAWTKVMNADRFDLLA
SIO_010081: DSHI_RS19180
subclass of: SO_0000673
so part of: DSHI_RS19180
location: complement(8358..10535)
location: region:8358-10535:-1
so has part: feature:8358-10535:-1:exon

WP_012187194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8358-10535:-1:exon

DSHI_RS19185
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19185
old locus tag: Dshi_3802
so part of: sequence
location: 10649..11578
location: region:10649-11578:1
so has part: feature:10649-11578:1:exon
subclass of: SO_0000010

position:10649:1
position: 10649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11578:1
position: 11578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10649-11578:1:exon

DSHI_RS19185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19185
old locus tag: Dshi_3802
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003505612.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrogen peroxide-inducible genes activator
translation: MKGLTLKHLRYFDALARTGHFGRAAEASGISQPALSMQIKELEAMLGAPLVERRAREIRLTGLGEDLRLRARKILAEIGELDELVRSRDGPLVGRLRIGVIPTVAPYFLPQVIRALALRMPAIELQPRETVTETLIAELLDSRLDAALVALPISEPDLREFALFSEDFVLVRAADEADQPVPSPERLKEMRLLLLEEGHCFRDQALSFCDISVGEPRYMMEGSSLSTLVQMVGAGMGLTLIPEMAVPLDTARAEVSVARFEPPAPSRTIGMVWRKTNPLAAQLAEIGATLRQAGAVADAGFSAPRGPIG
SIO_010081: DSHI_RS19185
subclass of: SO_0000673
so part of: DSHI_RS19185
location: 10649..11578
location: region:10649-11578:1
so has part: feature:10649-11578:1:exon

WP_012187195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10649-11578:1:exon

DSHI_RS19190
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19190
old locus tag: Dshi_3803
so part of: sequence
location: 11636..11827
location: region:11636-11827:1
so has part: feature:11636-11827:1:exon
subclass of: SO_0000010

position:11636:1
position: 11636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11827:1
position: 11827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11636-11827:1:exon

DSHI_RS19190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19190
old locus tag: Dshi_3803
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDPMHLKLAADMARRPLDPEALYTRPDMALWVWLRRAGAVLGAVRPMPAIRRPARDERVRHPV
SIO_010081: DSHI_RS19190
subclass of: SO_0000673
so part of: DSHI_RS19190
location: 11636..11827
location: region:11636-11827:1
so has part: feature:11636-11827:1:exon

WP_012187196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11636-11827:1:exon

DSHI_RS19195
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19195
old locus tag: Dshi_3804
so part of: sequence
location: 11802..12791
location: region:11802-12791:1
so has part: feature:11802-12791:1:exon
subclass of: SO_0000010

position:11802:1
position: 11802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12791:1
position: 12791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11802-12791:1:exon

DSHI_RS19195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19195
old locus tag: Dshi_3804
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008233805.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4440 domain-containing protein
translation: MSVSGTPSEPRRDPEDAAIMAVIARETDTFVVRDFDGWAACWVQDARTRLISASAAFGVTVQDGWEALASYMRGVFAAGASCEILSFERRNVSVTRTGGFAFVSFEGHGVHRGGRHERTFETRTLEQGPQGWLILHAAFVLSGAVEDAGPRIAVDGRGQVLSLPEGARAALAGHPGLTISQGRLRARRPAWDAVLQEGLARAAGLHGFCQHYRFTADHGRQFRLPLVLGETAEGGLAVCMLFVRDGMTFVDLQPGGDFDARLDLARALYGLSEAQAALARHVVGGQSLTAAARELGISVNTARTHLSRIFEKTGVQSQTALVRTLLSIV
SIO_010081: DSHI_RS19195
subclass of: SO_0000673
so part of: DSHI_RS19195
location: 11802..12791
location: region:11802-12791:1
so has part: feature:11802-12791:1:exon

WP_012187197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11802-12791:1:exon

DSHI_RS19200
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19200
old locus tag: Dshi_3805
so part of: sequence
location: 12918..15827
location: region:12918-15827:1
so has part: feature:12918-15827:1:exon
subclass of: SO_0000010

position:12918:1
position: 12918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15827:1
position: 15827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12918-15827:1:exon

DSHI_RS19200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19200
old locus tag: Dshi_3805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019402136.1
GO function: GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO process: GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: monovalent cation/H+ antiporter subunit A
translation: MSHEGSFLFIIALLPFLGALVPGLMIRAGRTACASFTAVPTALAFIMLLILSPAVLRGEVITAEIGWLPQLGLSASFFLDGLGLLFALMITGVGLLIILYARFYLSGDDPMGQFYTYLLLFQGAMLGIVLSDNILLLLIFWELTSLSSFLLIGYWKHLPEGRQGARMALAVTGAGGLAMIGGMLILGNIVGSYNLTDILQAGEQIRASEWYLPALILILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLMARMWPVLAGTDAWFYIVATTGLVTMVMGAGIALFKDDLKALLAFSTVSHLGLLTMLLGFGTQAAAVAAVFHIINHLTFKAALFMTAGIVDHETHTRDIKRLGGLRHLMPITFAIGTVAALSMAGIPLFNGFLSKEMMLEEASHTGWLGNPWVVPVVATFGALLSVAYSFRFIGHVFLGPVRDDYPAKPHDPPFGMWASPALLVVLVLVIGMAPFVAEGIVTAASSAVTGADLHPHLKIWHGFTPALWMSVVATLGGLMLLALHGKLDPIWQAARRPEAKAIFDGLVAGLVALTRGITERTHTGKISAYLALFTVSSVALGWIAYAGSGLSLPTRELLPVPPVIAVGWLMLVVATASVVVMHHQRFQALILIGIIGLSISAGFVYLSAPDLALTQVSVETVTIMLLLLALHFLPKTTPKESSLGRKIRDGAIAVTAGGGVGALAFAFLLRDVETISGFHLENSYEGGGGTNVVNVILVDFRGYDTYGEIIVLGIAGLVIYALMQALLDGPAARRLRSGDFSNDRSRDRHPMMMVVVTRVLMPIAVVVGLYIFLRGHNEPGGGFVAGLVIAIALLMQYMASGFAWTQERKRIEYHTMIGLGVIIAGLTGAGAWLLGRPFLTSAYTYINLPPIEEFELATAMLFDLGVFLTVLGAVMLMLYSLSRIARFAGETVNTGPMDYDPAVKGSVGTPPRPAEPPTPVRPGPEGAR
SIO_010081: DSHI_RS19200
subclass of: SO_0000673
so part of: DSHI_RS19200
location: 12918..15827
location: region:12918-15827:1
so has part: feature:12918-15827:1:exon

WP_012187198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12918-15827:1:exon

DSHI_RS19205
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19205
old locus tag: Dshi_3806
so part of: sequence
location: 15829..16182
location: region:15829-16182:1
so has part: feature:15829-16182:1:exon
subclass of: SO_0000010

position:15829:1
position: 15829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16182:1
position: 16182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15829-16182:1:exon

DSHI_RS19205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19205
old locus tag: Dshi_3806
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011456833.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na+/H+ antiporter subunit C
translation: MEILVASTVAVLTAGGVYLLLRLRTFPIILGLALLSYAVNVFLFASGRLAIDQSPILSKYGDASYSDPLPQALVLTAIVISFGMTAVLVMIGLGAYLESETDRIDIEDEDTREEGQP
SIO_010081: DSHI_RS19205
subclass of: SO_0000673
so part of: DSHI_RS19205
location: 15829..16182
location: region:15829-16182:1
so has part: feature:15829-16182:1:exon

WP_012187199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15829-16182:1:exon

DSHI_RS19210
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19210
old locus tag: Dshi_3807
so part of: sequence
location: 16179..17699
location: region:16179-17699:1
so has part: feature:16179-17699:1:exon
subclass of: SO_0000010

position:16179:1
position: 16179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17699:1
position: 17699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16179-17699:1:exon

DSHI_RS19210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19210
old locus tag: Dshi_3807
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007815049.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: monovalent cation/H+ antiporter subunit D
translation: MMHWIILPVVLPAMLAPIIAFVMRHDITLARTASVAGTVVLVGIALVLTGMAADGTTHVYRLGDWPAPFGIVLVLDRLSALMVLLTSVLALMVLLHAIATGWDARGRHFHALFQFQLMGISGAFLTGDVFNLFVFFEVLLIASYGLMIHSGGKARMRAGLQYVVMNLAGSTLFLFALGTLYATTGTLNIADLALRIPQIPAEEAALVRVAAILLMIVFAVKAALFPVQFWLPATYANAPAPVAALFAIMTKVGAYAILRVHTTAFGPGSPGTADLAATWLFPAAIVTIAVGAIGVLGARRLMPLIAFSVVGSMGTLLVAVAVFSTTATSAALYYMVHSTFAAACLFLIADLVVTRREADSLTPAPATVQNGLFAALFFGAAIAMAGMPPLSGFLGKLLVLDALRDPGVIGWAWTAILAGSLLTIVGFARAGSALFWKSTALPAPDGAAPATRATPMEIAPTLAMLLTLGALAVFAGPVSAYLQDTTTQLFDRAGYISAVLGTGEEG
SIO_010081: DSHI_RS19210
subclass of: SO_0000673
so part of: DSHI_RS19210
location: 16179..17699
location: region:16179-17699:1
so has part: feature:16179-17699:1:exon

WP_012187200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16179-17699:1:exon

DSHI_RS19215
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19215
old locus tag: Dshi_3808
so part of: sequence
location: 17704..18195
location: region:17704-18195:1
so has part: feature:17704-18195:1:exon
subclass of: SO_0000010

position:17704:1
position: 17704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18195:1
position: 18195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17704-18195:1:exon

DSHI_RS19215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19215
old locus tag: Dshi_3808
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009816488.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na+/H+ antiporter subunit E
translation: MLARLIPHPFLSLTLVLVWLALVNKFTLGNLILGSAFGLVIPMLTAAYWPNRPRIGRPLKIAEYVLIVLWDIVVANVQVAMIILFKPEKNIQSHWIPVPVELTSAEAITVLAGTITMTPGTVSATLAADGSCILVHCLHTDDPDAVRDEIKTRYERRLKEIFA
SIO_010081: DSHI_RS19215
subclass of: SO_0000673
so part of: DSHI_RS19215
location: 17704..18195
location: region:17704-18195:1
so has part: feature:17704-18195:1:exon

WP_012187201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17704-18195:1:exon

DSHI_RS19220
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19220
old locus tag: Dshi_3809
so part of: sequence
location: 18192..18461
location: region:18192-18461:1
so has part: feature:18192-18461:1:exon
subclass of: SO_0000010

position:18192:1
position: 18192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18461:1
position: 18461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18192-18461:1:exon

DSHI_RS19220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19220
old locus tag: Dshi_3809
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011456836.1
GO function: GO:0015075 - monoatomic ion transmembrane transporter activity [Evidence IEA]
GO process: GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: K+/H+ antiporter subunit F
translation: MIEYALLFAAACYGAALLLDLWRIAVGPDSADRILALDTMVINVIALLVLYGIWRGTAIYFEAAMLVAMVGFVATVAYCRFVLRGDIIE
SIO_010081: DSHI_RS19220
subclass of: SO_0000673
so part of: DSHI_RS19220
location: 18192..18461
location: region:18192-18461:1
so has part: feature:18192-18461:1:exon

WP_012187202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18192-18461:1:exon

DSHI_RS19225
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19225
old locus tag: Dshi_3810
so part of: sequence
location: 18469..18858
location: region:18469-18858:1
so has part: feature:18469-18858:1:exon
subclass of: SO_0000010

position:18469:1
position: 18469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18858:1
position: 18858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18469-18858:1:exon

DSHI_RS19225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19225
old locus tag: Dshi_3810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009806006.1
GO function: GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO process: GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na+/H+ antiporter subunit G
translation: MPFFAELLIAIALVVSGIFGFVGSYGLIKLKDSVQRLHAPTKATTLGVGGVLIASMIYFYAKTGYISVHELLISVFLFLTAPITANFIAKAYMARNIGEKDLPQSSGAYGWSIYDDAPESTPGEGRPAE
SIO_010081: DSHI_RS19225
subclass of: SO_0000673
so part of: DSHI_RS19225
location: 18469..18858
location: region:18469-18858:1
so has part: feature:18469-18858:1:exon

WP_012187203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18469-18858:1:exon

DSHI_RS19230
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: fahA
locus tag: DSHI_RS19230
old locus tag: Dshi_3811
so part of: sequence
location: complement(18901..20133)
location: region:18901-20133:-1
so has part: feature:18901-20133:-1:exon
subclass of: SO_0000010

position:18901:-1
position: 18901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20133:-1
position: 20133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18901-20133:-1:exon

DSHI_RS19230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: fahA
locus tag: DSHI_RS19230
old locus tag: Dshi_3811
EC number: 3.7.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014878843.1
GO function: GO:0004334 - fumarylacetoacetase activity [Evidence IEA]
GO process: GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fumarylacetoacetase
translation: MIHSWVPGANDPAGAFPLNNLAFGVFSTGDGPRCAVAIGDKVLDLAALQAAGLLPDHGFDAPALDTFMGRGQPAWQAVREALTELLRAGAETAPVRAALHDRAGVRLHLPFTLAEFTDFYAGRQHAFNVGSLFRDPANALPPNWLHMPIGYNGRASTVVVSGTPIHRPAGQIKDPSDPMPRFGPCERLDFELELGAVVGTPSQMGVPVTVDEADEMIFGYVLLNDWSARDIQAWEYVPLGPFQGKAFATTISPWVVPRAALAPFRCGPPVREVPLLPHLRDTGPMFHDIDLAVTLAPPGGAPTEVCRTNSNALYYSAAQLLAHHSTSGCAMRTGDLLGSGTISGPEKGMFGSLLEITWGGRDPVALAGGATRRFLADGDTVTLKGEARGDGYRIGFGTCTGTILPAPKRP
SIO_010081: DSHI_RS19230
subclass of: SO_0000673
so part of: DSHI_RS19230
location: complement(18901..20133)
location: region:18901-20133:-1
so has part: feature:18901-20133:-1:exon

WP_044029452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18901-20133:-1:exon

DSHI_RS19235
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: hmgA
locus tag: DSHI_RS19235
old locus tag: Dshi_3812
so part of: sequence
location: complement(20139..21446)
location: region:20139-21446:-1
so has part: feature:20139-21446:-1:exon
subclass of: SO_0000010

position:20139:-1
position: 20139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21446:-1
position: 21446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20139-21446:-1:exon

DSHI_RS19235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: hmgA
locus tag: DSHI_RS19235
old locus tag: Dshi_3812
EC number: 1.13.11.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008229445.1
GO function: GO:0004411 - homogentisate 1,2-dioxygenase activity [Evidence IEA]
GO process: GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homogentisate 1,2-dioxygenase
translation: MGTTEGYMPGFGNDFETEALPGALPQGMNSPQKCNYGLYGEQLSGTAFTDVRPERTWCYRIRPSVKHSHRYRRVELPYFRSAPDIHPEVTSLGQYRWDPVPHTDAPLTWLTGMRTMTTAGDVNTQVGMAAHVYLVTESMQDAYFYSADSEMLVVPQEGRLRFATELGIIDLEPKEIAILPRGLLYRVELLDGPARGFVCENYGQKFELPGRGPIGANCMANPRDFKTPVAAFEDREVPSTVTVKWCGQFHETQIGQSPLDVVAWHGNYAPCKYDLRNYCPVGAILFDHPDPSIFTVLTAPSGQPGTANIDFVLFRERWMVAEDTFRPPWYHKNIMSELMGNIYGQYDAKPQGFVPGGISLHNMMLPHGPDRDAFEKASNANLGPDKLDNTMSFMFETRFPQHLTRFAGTEAPLQDDYIDCWKDIEKKFDGTPGKK
SIO_010081: DSHI_RS19235
subclass of: SO_0000673
so part of: DSHI_RS19235
location: complement(20139..21446)
location: region:20139-21446:-1
so has part: feature:20139-21446:-1:exon

WP_085930429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20139-21446:-1:exon

DSHI_RS19240
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19240
old locus tag: Dshi_3813
so part of: sequence
location: complement(21527..21970)
location: region:21527-21970:-1
so has part: feature:21527-21970:-1:exon
subclass of: SO_0000010

position:21527:-1
position: 21527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21970:-1
position: 21970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21527-21970:-1:exon

DSHI_RS19240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19240
old locus tag: Dshi_3813
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008887683.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MQTPAPDFDLERYLPYRLTVIAGRLSAEIARQYKARFGISLPEWRVLLNVGHAENLSIRDIEKRADLEKSKVSRAASKLEAKGYLRKHVDTQDKRLLQLSLTEEGRQLLDALIPIAAAFQADLDARLGGHRDALHEALDRLLPAEEA
SIO_010081: DSHI_RS19240
subclass of: SO_0000673
so part of: DSHI_RS19240
location: complement(21527..21970)
location: region:21527-21970:-1
so has part: feature:21527-21970:-1:exon

WP_012187206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21527-21970:-1:exon

DSHI_RS19245
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19245
old locus tag: Dshi_3814
so part of: sequence
location: 22097..23047
location: region:22097-23047:1
so has part: feature:22097-23047:1:exon
subclass of: SO_0000010

position:22097:1
position: 22097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23047:1
position: 23047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22097-23047:1:exon

DSHI_RS19245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19245
old locus tag: Dshi_3814
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010437560.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MAKAFASQGDMTEKTITFDEVGRGVYAFTAEGDPNSGVIIGDDSVMIVEAQATPRLAQKVIERVRSVTDKPISHLVLTHYHAVRVLGASAYGAGQIIMSDTARAMVAERGQEDWDSEFQRFPRLFEGHESIPGLTWPTTTFSESMTVYLGTRRVDIRKIGRAHTAGDAVIHVPDENVMFTGDIVEDRSACYCGDGHFGDWGRTLDAILACEVDAVAPGRGGALIGKEAVQRAIASTRDFVDSTYRPAARVAARGGSLKEAWDAVRAACDPKFADYAIYEHCLPFNVARAFDEARGIDTPRIWTAQRDLEMWEALQG
SIO_010081: DSHI_RS19245
subclass of: SO_0000673
so part of: DSHI_RS19245
location: 22097..23047
location: region:22097-23047:1
so has part: feature:22097-23047:1:exon

WP_012187207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22097-23047:1:exon

DSHI_RS19250
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19250
old locus tag: Dshi_3815
so part of: sequence
location: 23077..24702
location: region:23077-24702:1
so has part: feature:23077-24702:1:exon
subclass of: SO_0000010

position:23077:1
position: 23077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24702:1
position: 24702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23077-24702:1:exon

DSHI_RS19250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19250
old locus tag: Dshi_3815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005857204.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MLQDRYALAFRLYPYRKCADQDAPAPRRHKVVVVGGGPIGLATALDLGRQGVPVLLLDDHEGIGMGSRAICFSKRTLEIAARYGCAGPMLDKGVVWNVGKVFQDDRQVFEFNLLPEAGHAHPAFINLPQPWFEKYLFDQICTAQEAGAPIEIRGRNRVEGIDTLADHAALEVATPDGPYRIEADWVIGCDGAGSPLRAMLGLDFKGRVFQDSFLIADIRMRSDDFPTERWFWFEPWFKSGASTLLHRQPDDIWRVDFQIGWDVDRAEELKEANIRRRLDAMLGAEVAYDIVWSSIYTFQCRRMEKFRHHRVIFAGDAAHQVSPFGARGANSGMQDVDNLGWKLGLVITGQAPDTLLDSYDHERIQGADENILHSTRATDFITPKSKVSHLFRNAVLHLAEKHPFARPLVNSGRLSVPCVYDGSPLNGPDALPGGPARTRVGSPCADAPLGADFLLRQLGDGFVLLAIDRAVPDEIALDGPPVRALRISKADDPSGALAARYLGTAEGAVYLIRPDQHVAARWPAFDAGAVQAALTTACGKD
SIO_010081: DSHI_RS19250
subclass of: SO_0000673
so part of: DSHI_RS19250
location: 23077..24702
location: region:23077-24702:1
so has part: feature:23077-24702:1:exon

WP_012187208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23077-24702:1:exon

DSHI_RS19255
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19255
old locus tag: Dshi_3816
so part of: sequence
location: 24705..24890
location: region:24705-24890:1
so has part: feature:24705-24890:1:exon
subclass of: SO_0000010

position:24705:1
position: 24705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24890:1
position: 24890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24705-24890:1:exon

DSHI_RS19255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19255
old locus tag: Dshi_3816
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018304763.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2783 domain-containing protein
translation: MTRLNTDPNIDAPDDFYAALLAAHEGKTDAESAAFNARLILVLANHIGDREVLEAALAAAQ
SIO_010081: DSHI_RS19255
subclass of: SO_0000673
so part of: DSHI_RS19255
location: 24705..24890
location: region:24705-24890:1
so has part: feature:24705-24890:1:exon

WP_012187209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24705-24890:1:exon

DSHI_RS19260
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: pcaF
locus tag: DSHI_RS19260
old locus tag: Dshi_3817
so part of: sequence
location: 25016..26218
location: region:25016-26218:1
so has part: feature:25016-26218:1:exon
subclass of: SO_0000010

position:25016:1
position: 25016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26218:1
position: 26218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25016-26218:1:exon

DSHI_RS19260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: pcaF
locus tag: DSHI_RS19260
old locus tag: Dshi_3817
EC number: 2.3.1.174
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011046507.1
GO function: GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
GO process: GO:0019619 - 3,4-dihydroxybenzoate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-oxoadipyl-CoA thiolase
translation: MDAVICDGVRTPIGRYGGALSSVRADDLAALPIAALMARNPGVDWARVDEVIYGAANQAGEDNRNVARMAALLAGLPEEVPGLTVNRLCASGMDAVGAAARGIKAGEYDLAIAGGIESMSRAPFVMPKAESAFTRAATVHDTTIGWRFVNPKIAAMHGIDTMPQTADTVAAAYEISRADQDAFAARSQARWAAADAAGLFADEIVPVPVPQRGSAPILVDRDEHPRPGTDAARLAGLKGINGPGLSVTAGNASGVNDGAAALLIASAAAARAHGLTPMARVVGMASAGVAPRVMGIGPVPASRKLLDRAGLTLDQMDVIELNEAFASQSLATLRQLGLADDDVRVNPNGGAIAMGHPLGMSGARLVLTAAHQLRRTGGRYALCTMCVGVGQGTALILERV
SIO_010081: DSHI_RS19260
subclass of: SO_0000673
so part of: DSHI_RS19260
location: 25016..26218
location: region:25016-26218:1
so has part: feature:25016-26218:1:exon

WP_012187210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25016-26218:1:exon

DSHI_RS19265
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: paaA
locus tag: DSHI_RS19265
old locus tag: Dshi_3818
so part of: sequence
location: 26236..27213
location: region:26236-27213:1
so has part: feature:26236-27213:1:exon
subclass of: SO_0000010

position:26236:1
position: 26236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27213:1
position: 27213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26236-27213:1:exon

DSHI_RS19265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: paaA
locus tag: DSHI_RS19265
old locus tag: Dshi_3818
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014879085.1
GO function: GO:0097266 - phenylacetyl-CoA 1,2-epoxidase activity [Evidence IEA]
GO process: GO:0010124 - phenylacetate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1,2-phenylacetyl-CoA epoxidase subunit PaaA
translation: MYAQMIASEASREDPEKLAAFQARIDAGEKIEPKDWMPEGYRKTLIRQIGQHAHSEIVGQLPEGNWITRAPTLERKAILLAKVQDEAGHGLYLYCAAETLGVSRDELTEMLLDGRMKYSSIFNYPTLTWADMGAVGWLVDGAAIMNQVPLQRTSFGPYARAMIRICKEESFHQRQGYDIMMKMARGTPAQKAMAQNALDRFWYPALMMFGPSDKDSVHSAQSMAWKIKINTNDELRQKFVDQTVPQAEYLGLTVPDETLKWNDDKGGYDFAEPDWDEFFEVIRGNGPCNTERLAARNRAWDEGQWVRDGLLAHAAKRKHRKVAAE
SIO_010081: DSHI_RS19265
subclass of: SO_0000673
so part of: DSHI_RS19265
location: 26236..27213
location: region:26236-27213:1
so has part: feature:26236-27213:1:exon

WP_012187211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26236-27213:1:exon

DSHI_RS19270
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: paaB
locus tag: DSHI_RS19270
old locus tag: Dshi_3819
so part of: sequence
location: 27210..27542
location: region:27210-27542:1
so has part: feature:27210-27542:1:exon
subclass of: SO_0000010

position:27210:1
position: 27210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27542:1
position: 27542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27210-27542:1:exon

DSHI_RS19270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: paaB
locus tag: DSHI_RS19270
old locus tag: Dshi_3819
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011046505.1
GO process: GO:0010124 - phenylacetate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1,2-phenylacetyl-CoA epoxidase subunit PaaB
translation: MSTQPAADPDAPAPRPRRPEWPLWEVFIRGQHGLSHRHVGSLHAPDEEMAIKHARDVYTRRNEGVSIWVVEARHIAASSPSEKGPLYEPSESKVYRHPTFFDIPDDVGAM
SIO_010081: DSHI_RS19270
subclass of: SO_0000673
so part of: DSHI_RS19270
location: 27210..27542
location: region:27210-27542:1
so has part: feature:27210-27542:1:exon

WP_012187212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27210-27542:1:exon

DSHI_RS19275
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: paaC
locus tag: DSHI_RS19275
old locus tag: Dshi_3820
so part of: sequence
location: 27542..28309
location: region:27542-28309:1
so has part: feature:27542-28309:1:exon
subclass of: SO_0000010

position:28309:1
position: 28309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27542-28309:1:exon

DSHI_RS19275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: paaC
locus tag: DSHI_RS19275
old locus tag: Dshi_3820
EC number: 1.14.13.149
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007118521.1
GO process: GO:0010124 - phenylacetate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1,2-phenylacetyl-CoA epoxidase subunit PaaC
translation: MGQADPDPLFAFLCRMGDNTLVLGHRVSEWCGHAPVLEEDIALANTALDLIGQTQMWLGHAGAVEGKGRSADDLAMLRDVWDFRNLLLVEQPNGDFGQTMMRQFLFDAWHLQMLRALTGSSEPQVAAIAAKSVKEVQYHLERSGEMVIGLGDGTAESHGRMQAALDLLWPYVGEMFQPDPVDRAMAAAGIAPDPSGLRAGFDAHVDAVLAEATLSIPEGGFAQTGGKTGFQHSEHLGHMLTQMQWLQRAYPGARW
SIO_010081: DSHI_RS19275
subclass of: SO_0000673
so part of: DSHI_RS19275
location: 27542..28309
location: region:27542-28309:1
so has part: feature:27542-28309:1:exon

WP_012187213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27542-28309:1:exon

DSHI_RS19280
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: paaJ
locus tag: DSHI_RS19280
old locus tag: Dshi_3821
so part of: sequence
location: 28311..28769
location: region:28311-28769:1
so has part: feature:28311-28769:1:exon
subclass of: SO_0000010

position:28311:1
position: 28311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28769:1
position: 28769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28311-28769:1:exon

DSHI_RS19280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: paaJ
locus tag: DSHI_RS19280
old locus tag: Dshi_3821
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008756374.1
GO process: GO:0010124 - phenylacetate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1,2-phenylacetyl-CoA epoxidase subunit PaaD
translation: MQPAPAEIWAWLDAVPDPEIPAISVVDLGIVRDVAWDGDTLEVAVTPTYSGCPATRVIAMDIETALHARGLDKVRIRTQISPPWTTDWLSEKGRAKLLDYGIAPPRAAGGPDSCPRCRSTNVTRISQFGSTPCKAQWRCADCLEPFDYFKCI
SIO_010081: DSHI_RS19280
subclass of: SO_0000673
so part of: DSHI_RS19280
location: 28311..28769
location: region:28311-28769:1
so has part: feature:28311-28769:1:exon

WP_012187214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28311-28769:1:exon

DSHI_RS19285
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19285
old locus tag: Dshi_3822
so part of: sequence
location: 28782..29852
location: region:28782-29852:1
so has part: feature:28782-29852:1:exon
subclass of: SO_0000010

position:28782:1
position: 28782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29852:1
position: 29852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28782-29852:1:exon

DSHI_RS19285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19285
old locus tag: Dshi_3822
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009831495.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2Fe-2S iron-sulfur cluster-binding protein
translation: MARFHPLSVTDVRKTIRDAVVVTLKPVDGGDFGFIQGQYLTFRRSFDGTELRRSYSICAGRDDGVLQVGIKRVEGGAFSTWANDSLAPGMTLEAMAPMGSFHTPLDPHTPRNYLAFAGGSGITPILSILKTVLAREPGSRLTLVYANRGVNTIMFREELEDLKNLHMGRLTVIHVLESDAQEIDLFTGRVDGAKCDALFAHWIDIDSIDTAFICGPEPMMLGIAAALRAHGMTDDRIKFELFASGQPGRLPRKPGAAAGHDPEARATAATVTMDGAARSFAMDKDQSILDAALANALDAPYACKAGVCSTCKCKVLEGEVEMIANHALEDYEVARGYVLSCQSYPVTDRVVVTYDH
SIO_010081: DSHI_RS19285
subclass of: SO_0000673
so part of: DSHI_RS19285
location: 28782..29852
location: region:28782-29852:1
so has part: feature:28782-29852:1:exon

WP_012187215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28782-29852:1:exon

DSHI_RS19290
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19290
old locus tag: Dshi_3823
so part of: sequence
location: complement(29860..30456)
location: region:29860-30456:-1
so has part: feature:29860-30456:-1:exon
subclass of: SO_0000010

position:29860:-1
position: 29860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30456:-1
position: 30456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29860-30456:-1:exon

DSHI_RS19290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19290
old locus tag: Dshi_3823
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019297692.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MSRPIAKDHDAKRMHILKVAARVFADQGFARASMAQVAKDCGISKANIYHYYSSKDALLFDILDTYLSALRDRILGLDLAGLAPEAQLGRIVTETLRAYEGMDHEHKIQTEGIPLLPPEQQKILKAYQRDLVGQMSGIVAAIAPEAFAQDSRKLRATVMSIFGMLNWFYMWNSPADRQARDDYAGLVTRLTLSGLRGL
SIO_010081: DSHI_RS19290
subclass of: SO_0000673
so part of: DSHI_RS19290
location: complement(29860..30456)
location: region:29860-30456:-1
so has part: feature:29860-30456:-1:exon

WP_012187216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29860-30456:-1:exon

DSHI_RS19295
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: paaF
locus tag: DSHI_RS19295
old locus tag: Dshi_3824
so part of: sequence
location: complement(30459..31769)
location: region:30459-31769:-1
so has part: feature:30459-31769:-1:exon
subclass of: SO_0000010

position:30459:-1
position: 30459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31769:-1
position: 31769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30459-31769:-1:exon

DSHI_RS19295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: paaF
locus tag: DSHI_RS19295
old locus tag: Dshi_3824
EC number: 6.2.1.30
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005978269.1
GO function: GO:0047475 - phenylacetate-CoA ligase activity [Evidence IEA]
GO process: GO:0010124 - phenylacetate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylacetate--CoA ligase PaaK
translation: MKDLSPNRAELDPIEIASRDEIAALQLDRMKWSLRHAYDNVPMYRARFDAAGVHPDDLRDLKDLAKFPFTHKSDLRDHYPFGMSAVPRDRLVRVHASSGTTGKPTVVVYTRHDIEVWADTLARSLRASGLRAGDMIHNAYGYGLFTGGLGAHYGIEKLGATVIPMGGGQTEKQVSLIHDFRPTAIMVTPSYMLNILEGFHKAGLDPRQSSLQVGVFGAEPWTNAMRQEVEEAFDMHAVDIYGLSEVMGPGVANECVETKDGLHVWEDHYYPEIIDPQTGEVLKDGAEGELVFTTLTKEGMPMIRYRTRDLTRLLPGTARSMRRIEKITGRSDDMMILRGVNVFPTQIEEQVMATGGLGPYFQIELYTSGRLDAMRVFVEATPAAADELSRTAAARVLTKHVRDMVGVSIEVVVGDPGSVARSQGKAVRVIDNRKKD
SIO_010081: DSHI_RS19295
subclass of: SO_0000673
so part of: DSHI_RS19295
location: complement(30459..31769)
location: region:30459-31769:-1
so has part: feature:30459-31769:-1:exon

WP_012187217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30459-31769:-1:exon

DSHI_RS19300
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: paaI
locus tag: DSHI_RS19300
old locus tag: Dshi_3825
so part of: sequence
location: complement(31792..32217)
location: region:31792-32217:-1
so has part: feature:31792-32217:-1:exon
subclass of: SO_0000010

position:31792:-1
position: 31792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32217:-1
position: 32217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31792-32217:-1:exon

DSHI_RS19300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: paaI
locus tag: DSHI_RS19300
old locus tag: Dshi_3825
EC number: 3.1.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014880891.1
GO process: GO:0010124 - phenylacetate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxyphenylacetyl-CoA thioesterase PaaI
translation: MTPQERARRAAEAMWSSDQASRWLGMRLVSVDVGTATLTLEVAAHHCNGHGICHGGITFALADSAFAFACNSRNQATVAQHNAITYIAPAQLGDTLTATARELSLTGRSGIYDIRVADQDDRTVAEMRGLSRAIKGRLFEE
SIO_010081: DSHI_RS19300
subclass of: SO_0000673
so part of: DSHI_RS19300
location: complement(31792..32217)
location: region:31792-32217:-1
so has part: feature:31792-32217:-1:exon

WP_012187218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31792-32217:-1:exon

DSHI_RS19305
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19305
old locus tag: Dshi_3826
so part of: sequence
location: 32430..34451
location: region:32430-34451:1
so has part: feature:32430-34451:1:exon
subclass of: SO_0000010

position:32430:1
position: 32430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34451:1
position: 34451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32430-34451:1:exon

DSHI_RS19305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19305
old locus tag: Dshi_3826
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011046488.1
GO function: GO:0070403 - NAD+ binding [Evidence IEA]
GO process: GO:0006631 - fatty acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
translation: MGGIVDTRVDTDTGLAWVTVDNPPVNATSTAVRQGLLDAVTRVQGARLAILRCAGRTFIAGGDMREFDAPPQPPDLPDVVDAIEASATPFVAVMQGTVLGGGLEIAMGCAYRIAAPGTRFGLPEVTVGLIPGAGGTQRAPRLFGWDAAIDMACAGKLLSAQEAHARGALDAIADDPEAAARALVPEPRIPVSERPAPPPPDSARIAAHRRTLAARARGQTAPLQALDALLWATGPFREGQRKERALHLSLRASDQSRALRHAFFAERTVARPAVIRDRTPREIARIAVMGGGLMGAGIAAACLGAGYRVDLLERDAATAEAARDRVRGLIAGALRRGKIDQARHDAHCAALRTGVGIGHAAEADLAIEAVFEETATKRAAFAALAQVMAPDAILATNTSYLDPREIFAGIPAPDRCLGLHFFAPAHVMKLLEVVRLPETSAETLATAFALAGRLRKVAVLSGICDGFIGNRMLAAYRRAAEYMLADGALPEQIDGAMRAYGMAMGPFEAQDLSGLHIAEANRRRQDATRPARERYVTLSDQLCALGRTGQRAGKGWYAYAEGDRRPRVDPAVTALITDYSAAHGLPRRTHDAGEIQARLLAVLANEGARLVEEGIADSDAAVDMVKLHGYGFPRWRGGPLFAARQAGDATIRAALDALDAASPGSWVRAQRYR
SIO_010081: DSHI_RS19305
subclass of: SO_0000673
so part of: DSHI_RS19305
location: 32430..34451
location: region:32430-34451:1
so has part: feature:32430-34451:1:exon

WP_012187219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32430-34451:1:exon

DSHI_RS19310
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: paaZ
locus tag: DSHI_RS19310
old locus tag: Dshi_3827
so part of: sequence
location: 34493..36529
location: region:34493-36529:1
so has part: feature:34493-36529:1:exon
subclass of: SO_0000010

position:34493:1
position: 34493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36529:1
position: 36529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34493-36529:1:exon

DSHI_RS19310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: paaZ
locus tag: DSHI_RS19310
old locus tag: Dshi_3827
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014875584.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylacetic acid degradation bifunctional protein PaaZ
translation: MSLLDVQSFAAGHWIAPDADARMIAHAVTGAPLARAGNGALDVQAMLDYARDTGGPALRALTFHDRARMLKALALHLGAHKQALYDLSFATGATQADHLIDIDGGIGTVFVFASKGRREMPDAHVYLDGEVEQLSRTGTFLGQHIATPLQGVAVHINAFNFPVWGMLEKLAPTLLAGMPAIVKPATASCYVTEKAVRIILDSGILPAGALQLVTGGLGDMLDRLTCQDVVSFTGSADTALRLRAAPHLLRNAVRFVAEQDSLNASILGPDAVPGTPEFDLFIREVAREMTAKAGQKCTAIRRILAPQAQVDGVIAALGARLAKTVIGDPRDTATTMGALVSNGQKRDVLAKARVIATEAERVFGDPEAFTVHGADARTGAFLPPMLLHCADPDAAQRLHDTEAFGPVSTVMGYRDLDHAVALVNRGAGSLVASLITHDPEVARQVALGAGAFHGRLYINDRDSMGEATGHGAPLPHMIHGGPGRAGGGEELGGVRGVMHYMQRTAIQGSPDMLTAIGGKWVPGATETPAPAHPFTRGFDALRIGETLHTPARQVTLADIEHFAAFTGDTFYAHMDDAAAARNPFFPGRVAHGYLLLSFAAGLFVDPDEGPVLANTGLDSLRFLKPVAPGDSLKARLTVKHKTPRNDAYGEVRWHVSLTNQEDDLVAEYELLTMIAYAA
SIO_010081: DSHI_RS19310
subclass of: SO_0000673
so part of: DSHI_RS19310
location: 34493..36529
location: region:34493-36529:1
so has part: feature:34493-36529:1:exon

WP_012187220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34493-36529:1:exon

DSHI_RS19315
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19315
old locus tag: Dshi_3828
so part of: sequence
location: 36567..37361
location: region:36567-37361:1
so has part: feature:36567-37361:1:exon
subclass of: SO_0000010

position:36567:1
position: 36567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37361:1
position: 37361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36567-37361:1:exon

DSHI_RS19315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19315
old locus tag: Dshi_3828
inference: COORDINATES: protein motif:HMM:NF019463.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PaaX family transcriptional regulator C-terminal domain-containing protein
translation: MQSPPFPAIVQHLTGDRTPRVWSFLISVFGDLAQAPDARISAALLRQISAQIGIRPEAMRVALHRLRKDGWIDSARAGRTSAYFLTDRGRAQSAAASPRIYGTGPGAETAWLAAFNPGQPGAHQDEAGVWLSATLLVSATRPATADAFVTPLGPGTALPDWMTARICDATTVQMAADFARALAGLRPLLDSAPGLTTLETTALRVLLVHGWRRIVLRTPILPDHLFPATWQGPVCRDGVADLLARYPKRPLAELEAARTALPCG
SIO_010081: DSHI_RS19315
subclass of: SO_0000673
so part of: DSHI_RS19315
location: 36567..37361
location: region:36567-37361:1
so has part: feature:36567-37361:1:exon

WP_012187221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36567-37361:1:exon

DSHI_RS19320
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19320
old locus tag: Dshi_3829
so part of: sequence
location: 37489..37941
location: region:37489-37941:1
so has part: feature:37489-37941:1:exon
subclass of: SO_0000010

position:37489:1
position: 37489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37941:1
position: 37941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37489-37941:1:exon

DSHI_RS19320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19320
old locus tag: Dshi_3829
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRILTYTTALTLLAAPALADMSADAKMDLVRNAQQLLNEYDIAADADSLSTAQLAEIQALDVSDRSVAEQRLEQIVGASATDTNVTADVSVPDVEVATPDSEVVQSILDDFDIAADADNLTEAQKAEILAVDMSDRSQAEMKLKTIVSG
SIO_010081: DSHI_RS19320
subclass of: SO_0000673
so part of: DSHI_RS19320
location: 37489..37941
location: region:37489-37941:1
so has part: feature:37489-37941:1:exon

WP_012187222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37489-37941:1:exon

DSHI_RS19325
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19325
old locus tag: Dshi_3830
so part of: sequence
location: 38247..39386
location: region:38247-39386:1
so has part: feature:38247-39386:1:exon
subclass of: SO_0000010

position:38247:1
position: 38247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39386:1
position: 39386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38247-39386:1:exon

DSHI_RS19325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19325
old locus tag: Dshi_3830
EC number: 1.1.1.94
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014748234.1
GO component: GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO function: GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO process: GO:0046167 - glycerol-3-phosphate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
translation: MKHEPVSGAPLPFNARPFARVAVLGAGSWGTALAVTLARAGVETRLWGRDPAVLRQINAGNSTPHLPGVTLPASLRAVKDMEGALTGAEAALIVVPSRSVRSVARQVAEYVPDGLPIAVCAKGIEAETGLLMTQVAEEELGKCPIGCVSGPTFAVETALGHPTAATVAFPFSYADRLRPQDSPAARLAVSLTTESFRAYVSDDLVAVEIGGAVKNVIAIACGMMTGAGFAENTRAALITRGLDEMKTLAEALGGRRETVTGLSGIGDLSLTCSSPTSRNMSLGQQLGQGLARAACFDGKPVVVEGEVNARSVTDLARSVGVSMPICETVRAILHDGADLGQAFAALWARPIEAEPRAMDLSFDHPATDKAIATLAERIS
SIO_010081: DSHI_RS19325
subclass of: SO_0000673
so part of: DSHI_RS19325
location: 38247..39386
location: region:38247-39386:1
so has part: feature:38247-39386:1:exon

WP_012187223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38247-39386:1:exon

DSHI_RS19330
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19330
old locus tag: Dshi_3831
so part of: sequence
location: 39383..40162
location: region:39383-40162:1
so has part: feature:39383-40162:1:exon
subclass of: SO_0000010

position:39383:1
position: 39383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40162:1
position: 40162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39383-40162:1:exon

DSHI_RS19330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19330
old locus tag: Dshi_3831
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007198558.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD family hydrolase
translation: MTRHETFPPSPIADKDLVLATDLDGTFLGGTDADRATFYNWIEANRARVGLIFVTGRDAGFISQMARRGEVPKPDYVVGDVGTTIAEMGKTDHFLSPIEMLEADIADAWGDAGTRVQAALRGVKGLRLQSTGFRYRASYDLDPDAFEDRAFDIVADLGLDALKSDNRFFDVLPKGVSKGPSLLRLLTHLGVQNHKTLVAGDTLNDLSMLRLGLPAVAVGGSEPALLAEVEPLDHVHVARGIGVAGIAEAITHLNLFPKS
SIO_010081: DSHI_RS19330
subclass of: SO_0000673
so part of: DSHI_RS19330
location: 39383..40162
location: region:39383-40162:1
so has part: feature:39383-40162:1:exon

WP_012187224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39383-40162:1:exon

DSHI_RS19335
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: ggpS
locus tag: DSHI_RS19335
old locus tag: Dshi_3832
so part of: sequence
location: 40174..41664
location: region:40174-41664:1
so has part: feature:40174-41664:1:exon
subclass of: SO_0000010

position:40174:1
position: 40174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41664:1
position: 41664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40174-41664:1:exon

DSHI_RS19335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: ggpS
locus tag: DSHI_RS19335
old locus tag: Dshi_3832
EC number: 2.4.1.213
inference: COORDINATES: protein motif:HMM:NF013173.2
GO function: GO:0033828 - glucosylglycerol-phosphate synthase activity [Evidence IEA]
GO process: GO:0006970 - response to osmotic stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucosylglycerol-phosphate synthase
translation: MSSDLVIVYHRQPYEEVEEDGQTVFRENKSPNGIVPTLKSFFGRVSHGSWIAWKQTETPETPEFDRKVEISDDYGNYTVSRLPLAPDQVREFYHVTSKEAFWPILHGFKERFNYDPVEWENFRDVNRRFAEAASEEAAEGAVVWIHDYNLWLVPGFLRAMRPDVKIAFFHHTPFPSADIFNMLPWRKEIIGSLLACDEVGFHIPRYAANFVSVARSLFDVDTPKRHAVPEAWISEGTALTERVLPSTITHDGRDVTVTVTPLGVDAAYIDAQARAPATQARAAEIRAEMGETRLLLSVGRTDYTKGGVQQLESFERVLEARADLRGKVQLMHVSVSANRNMAAYEEIQNEIEQVAGRINGRFGSLDWHPLVLVSRAIPFTDLVAYYRAADVAWITPLADGMNLVCKEFIASRIDGDGVLVLSEFAGAAVELEDAIITNPFSHKSMDLRIQEALDMDSAERKARMAGLRASVLGNTVQDWKPQILAALDKPVFDSAA
SIO_010081: DSHI_RS19335
subclass of: SO_0000673
so part of: DSHI_RS19335
location: 40174..41664
location: region:40174-41664:1
so has part: feature:40174-41664:1:exon

WP_012187225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40174-41664:1:exon

DSHI_RS19340
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19340
old locus tag: Dshi_3833
so part of: sequence
location: complement(41763..43181)
location: region:41763-43181:-1
so has part: feature:41763-43181:-1:exon
subclass of: SO_0000010

position:41763:-1
position: 41763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43181:-1
position: 43181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41763-43181:-1:exon

DSHI_RS19340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19340
old locus tag: Dshi_3833
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005858332.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase D family protein
translation: MLPERTPFQVLITAEEAWPAFERAVLDARDEIQMGFRIFDMTTALRSDEGRAVGADWFDLLAHKLGQGVRIRLVVSDFDPVMAAPLHKIALATARQGAGLAEVTGAGDRLEVVRALHPARAGLMWRSVLGPLAKREKGKVPVFATVTHHQKIAVIDREWLYIGGLDQNERRFDTLEHDRRARRTWTDVQLLLRGPEAAEAAAHLDGFLAACAGQGALAKGRCLRRTISAPRRLQAPYLAPWTRLREIEAAHLEAIRDAEQLIYIETQFLRSSRIAAALAHAGMSRPGLRLILVLPALPDDVAFEDNRGADARFGLWLSHKSLKRVTEAFGPRAAVLSPVKPERAAEDDLKVHAGAPMVYVHSKVLICDDRRALVGSANLNGRSLRWDTEVALDLRAPERVGALWRALAMHWWGGAVPDSALALGTAQAWWAAQAEENARSAPEARRGFMVPHDIAQVPELHMPMPGVPEDIV
SIO_010081: DSHI_RS19340
subclass of: SO_0000673
so part of: DSHI_RS19340
location: complement(41763..43181)
location: region:41763-43181:-1
so has part: feature:41763-43181:-1:exon

WP_012187226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41763-43181:-1:exon

DSHI_RS19345
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19345
old locus tag: Dshi_3834
so part of: sequence
location: complement(43171..44832)
location: region:43171-44832:-1
so has part: feature:43171-44832:-1:exon
subclass of: SO_0000010

position:43171:-1
position: 43171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44832:-1
position: 44832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43171-44832:-1:exon

DSHI_RS19345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19345
old locus tag: Dshi_3834
inference: COORDINATES: protein motif:HMM:NF019174.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor histidine kinase
translation: MTLALLPLGLISLYQTRSVIDRAEDLARGALIAEARQAVALERRVLIEAVGAARGLGVALLPLLDDPARCSAVLGEFIDQSNQIVFAGFLPPDGVMRCSSHGEEVDFSDFPGFAELMAAPGLSFEVNEQGAVSGQSVMIANVPIYAAGAFAGYVAISIPHAIVNDLLPSQPAERGLEIVVLNRAGEVISASEGLDGARALLPEALDTGVLRSDGSTTFRGRNQAGEVRVFATFTLLEDEVLVIGSWPVGAIGTAPAQGRMAVLFPLLMWAAGVLVAYFGLHRLVIRHVSALRDAMRRFALGERDVAALQLDAPSTEFAQAQRAFNRMVLILSEAEARREQDLQDKEVLLREVHHRVKNNLQMIASIMNMQSRTVTAPETKRVLQGLQRRVQGLAAIHRTLYTTTEMTCVDVAALADEMVSEVAALAGQGARAVTVRRDLTPLQLYPDQAVPLSMVLSEMLTNAFKYVGRPEDAAARIDVTLKAAPDGRVELAVENTRGTPLGEELDNDSTGIGTRLMRAFVMQLDGVEEVEDLPDSYRMVVRFRPAEFVPDAA
SIO_010081: DSHI_RS19345
subclass of: SO_0000673
so part of: DSHI_RS19345
location: complement(43171..44832)
location: region:43171-44832:-1
so has part: feature:43171-44832:-1:exon

WP_157865449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43171-44832:-1:exon

DSHI_RS19350
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19350
old locus tag: Dshi_3835
so part of: sequence
location: complement(44882..45445)
location: region:44882-45445:-1
so has part: feature:44882-45445:-1:exon
subclass of: SO_0000010

position:44882:-1
position: 44882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45445:-1
position: 45445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44882-45445:-1:exon

DSHI_RS19350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19350
old locus tag: Dshi_3835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008553468.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor
translation: MSGAPKADPRDEIVEHLSAMRAFAVSLTRNSATADDLVQDTLVKAWSNIDKFQAGTNMRAWLFTILRNTYYSLRRKRKREVEDTEGEMAAGLAQKPDHDGRLQMREFGEAFAELPDEQREALILVGAGGFSYEEAAEMCGVRIGTIKSRVNRARNKLTELLEMSEDDAMEMTDSVTQGIVAGNQSAA
SIO_010081: DSHI_RS19350
subclass of: SO_0000673
so part of: DSHI_RS19350
location: complement(44882..45445)
location: region:44882-45445:-1
so has part: feature:44882-45445:-1:exon

WP_012187228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44882-45445:-1:exon

DSHI_RS19355
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19355
old locus tag: Dshi_3836
so part of: sequence
location: complement(45442..45621)
location: region:45442-45621:-1
so has part: feature:45442-45621:-1:exon
subclass of: SO_0000010

position:45442:-1
position: 45442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45621:-1
position: 45621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45442-45621:-1:exon

DSHI_RS19355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19355
old locus tag: Dshi_3836
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008283222.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NepR family anti-sigma factor
translation: MTQKDVMQKRRKSTLDAQIDQNLKRAYEDVLKEEVPDRLTQLLEQLKAQDAKKKSGGDA
SIO_010081: DSHI_RS19355
subclass of: SO_0000673
so part of: DSHI_RS19355
location: complement(45442..45621)
location: region:45442-45621:-1
so has part: feature:45442-45621:-1:exon

WP_012187229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45442-45621:-1:exon

DSHI_RS19360
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19360
old locus tag: Dshi_3837
so part of: sequence
location: 45758..46573
location: region:45758-46573:1
so has part: feature:45758-46573:1:exon
subclass of: SO_0000010

position:45758:1
position: 45758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46573:1
position: 46573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45758-46573:1:exon

DSHI_RS19360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19360
old locus tag: Dshi_3837
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002721808.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MSQVTDTSLSAQIGANLPYLRRYARALTGSTASGDAYAAATLEAILSDPAQFDAAHGPKAGLFRVFHAIWSSSGAQMDDEFAPGSLQAKAQDHLRRLTPNTREALLLHTVEGFDITPLAFVMNATAEEVSELVDIAYAEMARSVSGKVMIIEDEAIIAADLESIVAEMGHRITGIARTETRALELAAEEKPDLILSDIQLADQSSGIDAVNRILDRDGEVPVIFITAYPERLLTGEGPEPAFLISKPYTEQQVRSAVSQAMFFASTETLKA
SIO_010081: DSHI_RS19360
subclass of: SO_0000673
so part of: DSHI_RS19360
location: 45758..46573
location: region:45758-46573:1
so has part: feature:45758-46573:1:exon

WP_012187230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45758-46573:1:exon

DSHI_RS21960
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21960
old locus tag: Dshi_3838
so part of: sequence
location: complement(46686..48080)
location: region:46686-48080:-1
so has part: feature:46686-48080:-1:exon
subclass of: SO_0000010

position:46686:-1
position: 46686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48080:-1
position: 48080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46686-48080:-1:exon

DSHI_RS21960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21960
old locus tag: Dshi_3838
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015135366.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4157 domain-containing protein
translation: MPDHARKASPEGAVAPLMPVRQRRATLAATPLQAVMQASPRVTQLLAMQQGMAARAVQRMAVEDEAPLQGKGLEDEEPLQAAGLEDEEPLQGRGLEDEEPLQGKANGAAPVQAQPGPGGNGGLPPQLQAGVEALSGHSMADVRVHRNSPQPAQVGALAYAQGRDIHLGPGQEKHLPHEAWHVVQQAQGRVRPTMQAKGVAINDDAGLEAEADRMGAQALHQSKFTPTEVMKTGAPMQARAVLQRKSKSDITDAIMDQHSQTVAMFPGNANTPITRVFGLRELAAAIVHRGYSGTQKDFAALMNEMETNAWCVAAWVHKGGLGGAAGGADPEPHITLMVGGTGYHVRVKTGSKLVLKNAKGGMLPQGGAQVDNSVDPYADFAATDLTTKGKEKALKYRNKNGGSVPQAVAFVASGCPDEGRYSKGTETLRYRADTGYFAIYDSAGGGGWKKDVKASKTARRLYFK
SIO_010081: DSHI_RS21960
subclass of: SO_0000673
so part of: DSHI_RS21960
location: complement(46686..48080)
location: region:46686-48080:-1
so has part: feature:46686-48080:-1:exon

WP_012187231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46686-48080:-1:exon

DSHI_RS19370
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19370
old locus tag: Dshi_3839
so part of: sequence
location: complement(48216..48713)
location: region:48216-48713:-1
so has part: feature:48216-48713:-1:exon
subclass of: SO_0000010

position:48216:-1
position: 48216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48713:-1
position: 48713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48216-48713:-1:exon

DSHI_RS19370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19370
old locus tag: Dshi_3839
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005622789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA starvation/stationary phase protection protein
translation: MTDALKIIPSTDDVSTGVRDTATIASGLADVLSDTYRLVFKTHAYHWNVEGPLFYSVHKMTEEQYENMFAAADELAERIRALGELAPMQLSAVMERSRVQDGHDGMSAFEMIEDLAADHEKIAHRLHALVELVESRKDPVTEDLATERSAFHEQAAWMLRALTKS
SIO_010081: DSHI_RS19370
subclass of: SO_0000673
so part of: DSHI_RS19370
location: complement(48216..48713)
location: region:48216-48713:-1
so has part: feature:48216-48713:-1:exon

WP_012187232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48216-48713:-1:exon

DSHI_RS19375
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19375
old locus tag: Dshi_3840
so part of: sequence
location: complement(48774..50414)
location: region:48774-50414:-1
so has part: feature:48774-50414:-1:exon
subclass of: SO_0000010

position:48774:-1
position: 48774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50414:-1
position: 50414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48774-50414:-1:exon

DSHI_RS19375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19375
old locus tag: Dshi_3840
EC number: 2.2.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005982054.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetolactate synthase large subunit
translation: MAGRRSGAQALVESLFSAGVDTVYGVPGEETTALMAALHDSEMAFVLCRHEQAAAFMAGVHGRLTGRPAACLATLGPGATNLVTGVADATLDFVPMIAITGQGGCGRLGRESHQIIDLEALFAPVTKQSRTLLEADAVPGAVAEAVRLARAEKPGAVHLCLPEDVADAQTALRDVPVPQVLPSPPAPEAIAQALTLLTRAERPILLAGAGVIRAGATAELRAFAEATGIAVVTSFMAGGVLPPEHELTLFTVGQPEGDYVDLSFEAADLIVSVGFDPVEYPAADLSRDGAIPVLHLGAGPAPADAGWHVAGQVVAGLPETLAALAEALEARRWDMPPAFAGVQAGMRKAFARAYSTSSEGPVAPQDICAEITRQLRAEDTVLSGVGLHKLWIARHVLPRRPGQVIIPNGLAGMGLALPGAVAAARLQQAGRVLAICGDGDVMMNVQDMETAARLGLDLTVMVWEDGGYGLIDAHQQKAGDDSTFGFGTPDWGRLARAFGWSHAPVAGLSELGEILRAGHDSAGPTLVSVPVDYAAGGGLPGVRPAA
SIO_010081: DSHI_RS19375
subclass of: SO_0000673
so part of: DSHI_RS19375
location: complement(48774..50414)
location: region:48774-50414:-1
so has part: feature:48774-50414:-1:exon

WP_012187233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48774-50414:-1:exon

DSHI_RS19380
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: gdhA
locus tag: DSHI_RS19380
old locus tag: Dshi_3841
so part of: sequence
location: complement(50414..51757)
location: region:50414-51757:-1
so has part: feature:50414-51757:-1:exon
subclass of: SO_0000010

position:51757:-1
position: 51757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50414-51757:-1:exon

DSHI_RS19380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: gdhA
locus tag: DSHI_RS19380
old locus tag: Dshi_3841
EC number: 1.4.1.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017628608.1
GO function: GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
GO process: GO:0006520 - amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADP-specific glutamate dehydrogenase
translation: MERRDALSELFLSELATNPDFEPNFYNALAEVAQDVLTIEKNDKAYAAARVLARLAVPDRILSFRVTWADDAGEVQVNQAWRVQTSNAIGPYKGGLRFHPSVTQDTLKFLGFEQCFKNALTGLPMGGAKGGADFNPRGRSRQEIMRFCQALMAQMAPFIGPDQDVPAGDINVGTREVGWLFGAWRQRRGMFGGAFTGKGLSFGGSKMRVEATGFGVVYFVACMLAEMGTSLEGKRVLVSGKGNVATHAAQKAVEEGAKVLTLSDTGGTLLAEEGLTLDAIAWVQARKDAGEDIAAPPAELGLRYLEGQTPWHIPADIALPCATQNELDQSAAEILRDNGLMLLAEGANMPLTPGASRVMRLAGIAVAPGKAANAGGVAVSGLEMTQNAQRLTWSAARVDETLRDIMERIHRAVVAEGRVDGRIDYGRGANIAAYRKLADAITAQGVL
SIO_010081: DSHI_RS19380
subclass of: SO_0000673
so part of: DSHI_RS19380
location: complement(50414..51757)
location: region:50414-51757:-1
so has part: feature:50414-51757:-1:exon

WP_012187234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50414-51757:-1:exon

DSHI_RS21965
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21965
old locus tag: Dshi_3842
so part of: sequence
location: complement(51857..52027)
location: region:51857-52027:-1
so has part: feature:51857-52027:-1:exon
subclass of: SO_0000010

position:51857:-1
position: 51857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52027:-1
position: 52027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51857-52027:-1:exon

DSHI_RS21965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21965
old locus tag: Dshi_3842
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013173747.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1328 domain-containing protein
translation: MRAWSLIFFVFAAISALFGFTGLAEATAGIAVVLFWIFLVLGFGALAWGISTRNRD
SIO_010081: DSHI_RS21965
subclass of: SO_0000673
so part of: DSHI_RS21965
location: complement(51857..52027)
location: region:51857-52027:-1
so has part: feature:51857-52027:-1:exon

WP_012187235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51857-52027:-1:exon

DSHI_RS19390
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19390
old locus tag: Dshi_3843
so part of: sequence
location: complement(52170..52526)
location: region:52170-52526:-1
so has part: feature:52170-52526:-1:exon
subclass of: SO_0000010

position:52170:-1
position: 52170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52526:-1
position: 52526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52170-52526:-1:exon

DSHI_RS19390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19390
old locus tag: Dshi_3843
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAPHALLFTRNVLEAEDLSEMLRALRGWEAATCRDLAAALELATRAGARLQMAFVTPPVPALEDSGLLIALRGTGARIVVIDLDAAAAGPLGVETLARPFTAEQVRDLLDSDPRARSG
SIO_010081: DSHI_RS19390
subclass of: SO_0000673
so part of: DSHI_RS19390
location: complement(52170..52526)
location: region:52170-52526:-1
so has part: feature:52170-52526:-1:exon

WP_157865450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52170-52526:-1:exon

DSHI_RS19395
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19395
old locus tag: Dshi_3844
so part of: sequence
location: 52616..53344
location: region:52616-53344:1
so has part: feature:52616-53344:1:exon
subclass of: SO_0000010

position:52616:1
position: 52616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53344:1
position: 53344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52616-53344:1:exon

DSHI_RS19395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19395
old locus tag: Dshi_3844
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011456685.1
GO function: GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MTIDCTACPLRKNALFSPMTEEEVAFMRRFKTGEMTVTAGTQLLLEGSNAAQLYTCLSGHGLRYKTLSDGRRQVVSFVLPGDFIGLQASVMGEMHHSVESTTDMTLCVFNRADIWTLFKTHPARAFDLTFLAAVEEHFLGESLATVGQKGAFEKLAWSLHRFFTRADAVGLVEDGQCPLPYRQQDLADALGLSLVHTNKTLSRLRGQGLADWSDGRLTVPDVAALAEIGLVDETRMQTRPLI
SIO_010081: DSHI_RS19395
subclass of: SO_0000673
so part of: DSHI_RS19395
location: 52616..53344
location: region:52616-53344:1
so has part: feature:52616-53344:1:exon

WP_012187237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52616-53344:1:exon

DSHI_RS19400
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19400
so part of: sequence
location: complement(53381..53665)
location: region:53381-53665:-1
so has part: feature:53381-53665:-1:exon
subclass of: SO_0000010

position:53381:-1
position: 53381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53665:-1
position: 53665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53381-53665:-1:exon

DSHI_RS19400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19400
inference: COORDINATES: protein motif:HMM:NF023069.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DnaA N-terminal domain-containing protein
translation: MPQSNVVPLRPVPEVSRAGGLWPQVQLQLRDSYPAQFATWFSKLEEVDLEGGCLTLAAPSAFVAATVMRDFEGLLVSAARQVEPSIHRVVLQKP
SIO_010081: DSHI_RS19400
subclass of: SO_0000673
so part of: DSHI_RS19400
location: complement(53381..53665)
location: region:53381-53665:-1
so has part: feature:53381-53665:-1:exon

WP_157865451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53381-53665:-1:exon

DSHI_RS19405
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19405
so part of: sequence
location: 53652..54665
location: region:53652-54665:1
so has part: feature:53652-54665:1:exon
subclass of: SO_0000010

position:53652:1
position: 53652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54665:1
position: 54665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53652-54665:1:exon

DSHI_RS19405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008209744.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MLCGTSAPCPIRVAIVNFKGGAGKSTVALHFAHAAALDGYRVLAVDFDPQATLSHSMGLSDVVEDHTVWGIMARDLIRETERMNATAAGAESGTALPRRQLPAAIQDLGLGALRVSDFIQPTAWPTIDIIPSCANAAFVEFASAQYRHLNPEWSFFAAVSRFLDQIPDDAYDIILFDCPPAIGYQSMNAVFAADMLYIPSGPGYWEYDSTTSFIGQLAEALEDLAHGADSFARAGVTLPKVFRDIRFLMTRYEPGNELHRAMFQAFKQVFGDRVADSPIEMTRAVEQSGRFLSSVYEIDYREMTRGTWRRARATFDAAYTEFRGHMLAAWDNLEDTP
SIO_010081: DSHI_RS19405
subclass of: SO_0000673
so part of: DSHI_RS19405
location: 53652..54665
location: region:53652-54665:1
so has part: feature:53652-54665:1:exon

WP_245533099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53652-54665:1:exon

DSHI_RS19410
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19410
old locus tag: Dshi_3847
so part of: sequence
location: 54662..55786
location: region:54662-55786:1
so has part: feature:54662-55786:1:exon
subclass of: SO_0000010

position:54662:1
position: 54662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55786:1
position: 55786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54662-55786:1:exon

DSHI_RS19410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19410
old locus tag: Dshi_3847
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011749186.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB N-terminal domain-containing protein
translation: MSKKRRMFDIEMPPEADAAPPKTFPAGKVSHAETTPPRRGPMAAAITETSDHARDRGALEAQIRAENDKLAHEFVRLKKAGQIVDRIPLDQIETYKLARDRLPGLDPELDELIASIRDLGLSNPIRVEPREDGRYELIQGYRRVQAYRRLLDETGDAETWGAIPAGIEARGAALEALYRRMVDENMVRKDISFAEMAQLALNYAADPHTAENDPNRAVAELFQSANYSKRSYIRAFIRVMRELGEDLQFPTEIPRALGTTLAARMDEMEGIPHAIREELKTWENRSVVEELAVLRRFAGGEIPEDAPRPAPKPAVPATPGGTKAKTTFQMERPQGRAKCTAANGRLEIRLERDFSALERRKLEQAVRLFLDQLD
SIO_010081: DSHI_RS19410
subclass of: SO_0000673
so part of: DSHI_RS19410
location: 54662..55786
location: region:54662-55786:1
so has part: feature:54662-55786:1:exon

WP_012187238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54662-55786:1:exon

DSHI_RS19415
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19415
old locus tag: Dshi_3848
so part of: sequence
location: complement(55886..56080)
location: region:55886-56080:-1
so has part: feature:55886-56080:-1:exon
subclass of: SO_0000010

position:55886:-1
position: 55886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56080:-1
position: 56080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55886-56080:-1:exon

DSHI_RS19415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19415
old locus tag: Dshi_3848
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008235471.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PLD nuclease N-terminal domain-containing protein
translation: MDIEITGIGGFILLVLNIWAFVSIISSNATTGRKVIWCLLVLILPLIGFLIWLFAGPRGARHTA
SIO_010081: DSHI_RS19415
subclass of: SO_0000673
so part of: DSHI_RS19415
location: complement(55886..56080)
location: region:55886-56080:-1
so has part: feature:55886-56080:-1:exon

WP_012187239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55886-56080:-1:exon

DSHI_RS19420
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19420
old locus tag: Dshi_3849
so part of: sequence
location: complement(56108..56320)
location: region:56108-56320:-1
so has part: feature:56108-56320:-1:exon
subclass of: SO_0000010

position:56108:-1
position: 56108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56320:-1
position: 56320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56108-56320:-1:exon

DSHI_RS19420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19420
old locus tag: Dshi_3849
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008688216.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2945 domain-containing protein
translation: MAFQTGQQVAWDWGNGTAEGKITQIYTETVTRTLKGSEVTRHGSDDTPALLIEQEDGDQVLKSCTEVRPA
SIO_010081: DSHI_RS19420
subclass of: SO_0000673
so part of: DSHI_RS19420
location: complement(56108..56320)
location: region:56108-56320:-1
so has part: feature:56108-56320:-1:exon

WP_012187240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56108-56320:-1:exon

DSHI_RS19425
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19425
old locus tag: Dshi_3850
so part of: sequence
location: complement(56328..56588)
location: region:56328-56588:-1
so has part: feature:56328-56588:-1:exon
subclass of: SO_0000010

position:56328:-1
position: 56328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56588:-1
position: 56588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56328-56588:-1:exon

DSHI_RS19425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19425
old locus tag: Dshi_3850
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008231986.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rho termination factor N-terminal domain-containing protein
translation: MGDHGPQIKDDDTYEALRDDGASKAKAARIANAQASDTQNPASKGGSAPPYEEWTKSELYDRAKELDIQGRSDMSKADLIDALRNQ
SIO_010081: DSHI_RS19425
subclass of: SO_0000673
so part of: DSHI_RS19425
location: complement(56328..56588)
location: region:56328-56588:-1
so has part: feature:56328-56588:-1:exon

WP_012187241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56328-56588:-1:exon

DSHI_RS19430
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19430
old locus tag: Dshi_3851
so part of: sequence
location: complement(56652..56852)
location: region:56652-56852:-1
so has part: feature:56652-56852:-1:exon
subclass of: SO_0000010

position:56652:-1
position: 56652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56852:-1
position: 56852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56652-56852:-1:exon

DSHI_RS19430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19430
old locus tag: Dshi_3851
inference: COORDINATES: protein motif:HMM:NF014171.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrkA C-terminal domain-containing protein
translation: MTLPETFPAGKVSGLDLPDDTRPVARIRDGVEALADPETELCPGDCLLLAGTPEALETAAKALKDA
SIO_010081: DSHI_RS19430
subclass of: SO_0000673
so part of: DSHI_RS19430
location: complement(56652..56852)
location: region:56652-56852:-1
so has part: feature:56652-56852:-1:exon

WP_044029444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56652-56852:-1:exon

DSHI_RS19435
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19435
old locus tag: Dshi_3852
so part of: sequence
location: complement(57076..58143)
location: region:57076-58143:-1
so has part: feature:57076-58143:-1:exon
subclass of: SO_0000010

position:57076:-1
position: 57076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58143:-1
position: 58143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57076-58143:-1:exon

DSHI_RS19435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19435
old locus tag: Dshi_3852
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008335981.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNMQASTLTDDFDDPLNTIEEDEEAHEDDLWFLPGPLEEEPDDLPPGPRAEPPDTAVVDDWAKAEGIHAARLARVAGRLGALDDRLLRGPEGWRHRLALIEAADLSWFAGDRVSSDRLALWISMRLSGAQDDPDALARVGWAVRRLTGGPGPKADLAAFLDRRDPENIEDSAERFKDRAVGWLDVMAAAGELHPITRACMGFHLWSLAGLGGQGDQIEAAVTASRIAARDGSGAVFAPLAMGGAGGLRVSGLPPERLARWLDGMNSAILTAMRHLDGTQTWSVRAEGAMSQLSGRTPAALRSVLTEWPLVSAPMAEALTGASRAAVQRNLAWMEERGLIREVTQQGRFRMWRIKD
SIO_010081: DSHI_RS19435
subclass of: SO_0000673
so part of: DSHI_RS19435
location: complement(57076..58143)
location: region:57076-58143:-1
so has part: feature:57076-58143:-1:exon

WP_012187243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57076-58143:-1:exon

DSHI_RS19440
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19440
old locus tag: Dshi_3853
so part of: sequence
location: 58370..59263
location: region:58370-59263:1
so has part: feature:58370-59263:1:exon
subclass of: SO_0000010

position:58370:1
position: 58370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59263:1
position: 59263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58370-59263:1:exon

DSHI_RS19440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19440
old locus tag: Dshi_3853
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009503864.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MSLIGYARVSTEDQTPLPQSEALQSAGCSEIFEEHASGGNRARPVLARVLERISKGDTLVVVRIDRLARSLSHLLEVIERLEAKGAFFRSLQDPIDTASPQGKFTLQVLGAAAEFERALIRERTKAGLASARAKGRVGGNPGLRNKDPAALRKVRLARQDGYMERLNETAQDWVPHVRRLRPDMAWEDVLRIINGPLPHGRHWTQSRLLRAVKAYVRDGFLPAEVLGRAGRRETDDRLPAIVAAIKGADPEITLQAICDRLEAMRERTPRGRTSWQPSSVKMLLERAERLELFDQGT
SIO_010081: DSHI_RS19440
subclass of: SO_0000673
so part of: DSHI_RS19440
location: 58370..59263
location: region:58370-59263:1
so has part: feature:58370-59263:1:exon

WP_044029463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58370-59263:1:exon

DSHI_RS19445
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19445
old locus tag: Dshi_3854
so part of: sequence
location: complement(59311..60357)
location: region:59311-60357:-1
so has part: feature:59311-60357:-1:exon
subclass of: SO_0000010

position:59311:-1
position: 59311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60357:-1
position: 60357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59311-60357:-1:exon

DSHI_RS19445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19445
old locus tag: Dshi_3854
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011536551.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MTSDLSISNAGRGLAPDRYRQADFFVCDIFDAIPKDDLATMEHPVFSLATRPDRRVLSYAHNGVEIEVTPSVKGLATIHDKDILIFCISQLMAALNAGRAVSRTLQIKAHDLLVATNRETSGDAYRRLREAFERLAGTRITTNLTTGGQEVTRGFGLIESWEIVRKARGGRMVSVSVTLSEWLFNAVVSKSVLTLSRDYFRLRKPLERRIYELARKHCGRQARWVVSVDLLLKKSGSASPRRVFRKMLRDMIAADHLPDYEMVEVPGDKIAFALRGGLVEDAGPGLGAALPPLRAETLEEARALAPGWDVYGLEADWRAYWAGSGRPRLRSADKAFLGFVRARIGAEG
SIO_010081: DSHI_RS19445
subclass of: SO_0000673
so part of: DSHI_RS19445
location: complement(59311..60357)
location: region:59311-60357:-1
so has part: feature:59311-60357:-1:exon

WP_012187245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59311-60357:-1:exon

DSHI_RS19450
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19450
old locus tag: Dshi_3855
so part of: sequence
location: 60736..62127
location: region:60736-62127:1
so has part: feature:60736-62127:1:exon
subclass of: SO_0000010

position:60736:1
position: 60736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62127:1
position: 62127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60736-62127:1:exon

DSHI_RS19450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19450
old locus tag: Dshi_3855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020043761.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MARDPAEQQPPYFNIDPDAALAELGPPTDSAGFAAIAEACARGRTDLASRGLNEAGRKELRLFSTWEITRYLIPVAQAHFRRVLKQNPDLPQGRSETTGGAKWFTLDEVLTLRAHFAAGGSKAKEYRPYRPEGLPAKLVAVANFKGGVGKTSTAAHLAMSAALDGYKVLVLDLDSQGSMTSIFGGQVADEWATVFPLLARHYARHLRGENQRRMDRGEPPIPFDDTLSEALDVTAQSLIQPTHWPNIDLIGAQLNLYWAEFQIPVWRMQARTWKLWDALTESLEADGILDAYDLVFIDTPPALGYLTINGLAASDILLVPMGASFLEFDSTGRFFDMLHSTFHSIEEGENMAARALGRDELAFEWDAVRAVVTRYDGAQQAELAGLMQAYLGRTLSPHRQDFTALIGQAGEQVSGIYEADYRDFNRETYVRGRETFDATYAAFKRLLMGVWRREELAARERAA
SIO_010081: DSHI_RS19450
subclass of: SO_0000673
so part of: DSHI_RS19450
location: 60736..62127
location: region:60736-62127:1
so has part: feature:60736-62127:1:exon

WP_012187246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60736-62127:1:exon

DSHI_RS19455
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19455
old locus tag: Dshi_3856
so part of: sequence
location: 62250..63425
location: region:62250-63425:1
so has part: feature:62250-63425:1:exon
subclass of: SO_0000010

position:62250:1
position: 62250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63425:1
position: 63425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62250-63425:1:exon

DSHI_RS19455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19455
old locus tag: Dshi_3856
inference: COORDINATES: protein motif:HMM:NF014273.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB N-terminal domain-containing protein
translation: MAKRKRLTPAQPGFLETKSAGADPGPGLTPGFAAQQTPVAHTPPAPPPAPPIAQVARDSSASAALAEVSAELESARAEGRLIQALPLHSIRRDHLVRDRLLVDPDEMIVLKQSLRSRGQQTPIEVVDLGPEAEPRRYGLISGWRRLTALDELHGGTGEARFGTVQAILRSPETAEAAYTAMVEENEIRVALSPYERARIVAKSVEQGVFPSTKQALQTLFAAASRAKRSKIGSFLPVVAALDGVLRHPAALTERLGLRLSKLLEDDPELGRDWRVRLRKAEIEDEPAAEIAWLEAAAAEAEAGPGASAQPASPPETGTRTAPAAAPDTPPAPPAPSAAKPATPAPEGAREIIKGVYLEQGGGFIHQTLTLSGPKVDAAFKARLIAWLQDQS
SIO_010081: DSHI_RS19455
subclass of: SO_0000673
so part of: DSHI_RS19455
location: 62250..63425
location: region:62250-63425:1
so has part: feature:62250-63425:1:exon

WP_012187247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62250-63425:1:exon

DSHI_RS19460
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19460
old locus tag: Dshi_3857
so part of: sequence
location: 63855..65726
location: region:63855-65726:1
so has part: feature:63855-65726:1:exon
subclass of: SO_0000010

position:63855:1
position: 63855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65726:1
position: 65726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63855-65726:1:exon

DSHI_RS19460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19460
old locus tag: Dshi_3857
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009175289.1
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside-diphosphate sugar epimerase/dehydratase
translation: MLNFVKSLTLGQKAITLLVVDLVLIPLALIVTFALQPIPVSPGETIALILPILPYLLAASALVAFWLGIPYIRLNAYEARAVGKTAQYAAANGLIALVLSKIAGLGLTTGLYVIFAGCFFLFSAASRVVMLQILTAIYRRDEGHTRVMIYGAGTTGTQLVSALNAHKTIYPVAFVDDNAALHGLTVAGLPVHSPVRIRELVRDKQIDRVLLAVPSLSQPKQAQLARRLQKLGLEVQALPSFSQLIGEEELVDKLKPVESHTFLGRQQVCTELERGCESYADRVVLISGAGGSIGSELCRQVLACRPAKLVLYELNELALYNVDMELRSLAEVTGTELVPVLGSVTDPRQVRGVLAEHKVQVVLHAAAYKHVPLVEANPLAGLANNVFGTQTLAREAAEYGIERFILISSDKAVRPTNVMGASKRLAELVIQDLETRYTGTVFTMVRFGNVLGSSGSVVPLFQEQIRRGGPVTVTDPKVTRYFMTVQEAVRLVLTAGSMARGGEVFVLDMGAPVPIVQLARQVIESAGYTVRDDATPDGDIEIVFTGLRPGEKMFEELTITDDHIGTRHPKLFCAREQSLSEIEIAGILRSLRQAVASGDPDAGRAVITRWVEGYVPGVKSVPL
SIO_010081: DSHI_RS19460
subclass of: SO_0000673
so part of: DSHI_RS19460
location: 63855..65726
location: region:63855-65726:1
so has part: feature:63855-65726:1:exon

WP_044029445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63855-65726:1:exon

DSHI_RS19465
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19465
old locus tag: Dshi_3858
so part of: sequence
location: 66007..68247
location: region:66007-68247:1
so has part: feature:66007-68247:1:exon
subclass of: SO_0000010

position:66007:1
position: 66007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68247:1
position: 68247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66007-68247:1:exon

DSHI_RS19465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19465
old locus tag: Dshi_3858
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020041627.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YjbH domain-containing protein
translation: MRAGRFAAKYRLARGGLLALLLSVSAAALQAQSTEQLLAVQGPSERGASAAAAGPEGAFRPSPETIFRQPSLNFYGVPGLIDLPSGEAMPDGQLAVGVSTFGGTTRTTLSFQLTPRISGSFRYSAIRDWDSDGFDTYYDRSFDLRFLALEESRFLPSVTIGLQDFAGTGIYAGEYIAATKTFAGGLKGTVGLGWGRFGSASSFGGLISDERPAFDPNDTGGEPSTDQWFRGPQSVFAGIEWQPTDRLGLKLEYSTDAYEAETVDRDVFERESDWNFGLEYQVSEDWRLGGYYLYGAELGVMAQFQLNPRRPAVPMRVAAPDPVDPRPDRAANPTLWSADWITIPGAQETLRDALEAPLAAEGIELQALAATGTSIDLRYRNARYLSSANAVGRVARVLARVLPPSIETFHLTPEVSGMPASRITLRRTALEELEFTPQAGARLLAQSEISEAPPLPETAVASETVAPRFSWSLGPYLEQSFFDPDEPWRFEIGLDASASYQITPNLSLSGSITKEIVGTIADSTRVSNSQLPPVRSNGVLYAREGDPGLDNLVLAYTFRPGQDLYGRVSAGYLESMFGGVSAELLWKPVDSRLALGVELNYARQRDFDQRLGFQDYDVITGHASAYYAFGDGYLGQVDVGQYLAGDKGATFTLSREFGNGWKLGGFFTLTDVSAEEFGEGSFDKGIMLTIPAGWILGQPNRTALSTTIRPLQRDGGQRLEVPGRLYDPVRAQHARALTRQWERVWQ
SIO_010081: DSHI_RS19465
subclass of: SO_0000673
so part of: DSHI_RS19465
location: 66007..68247
location: region:66007-68247:1
so has part: feature:66007-68247:1:exon

WP_012187249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66007-68247:1:exon

DSHI_RS19470
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19470
old locus tag: Dshi_3859
so part of: sequence
location: 68244..69005
location: region:68244-69005:1
so has part: feature:68244-69005:1:exon
subclass of: SO_0000010

position:68244:1
position: 68244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69005:1
position: 69005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68244-69005:1:exon

DSHI_RS19470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19470
old locus tag: Dshi_3859
inference: COORDINATES: protein motif:HMM:NF022552.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YjbF family lipoprotein
translation: MSGHRIARRALRNAPGAGRGLKAALHKGIGRIGGALALGLLLAGCASDNIAEDADLWDDLVAVVQTRLEPDPAAGTETRITRAMLAGVTDPLIRVTRLPDGPVATLVPAARGGPAAAPLITWRGRDPVTLTTRGGLLVATRGLGRDLMSSDLRGLAQALRAGGGRYARSHVVLVGNTDALTLSFDCTLRAEGAETITILERSVATTRFTEACAGPTGTFGNTYWRGAGDGTLWQSQQWAGPDFGHVRIERLIK
SIO_010081: DSHI_RS19470
subclass of: SO_0000673
so part of: DSHI_RS19470
location: 68244..69005
location: region:68244-69005:1
so has part: feature:68244-69005:1:exon

WP_012187250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68244-69005:1:exon

DSHI_RS19475
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19475
old locus tag: Dshi_3860
so part of: sequence
location: 69139..69381
location: region:69139-69381:1
so has part: feature:69139-69381:1:exon
subclass of: SO_0000010

position:69139:1
position: 69139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69381:1
position: 69381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69139-69381:1:exon

DSHI_RS19475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19475
old locus tag: Dshi_3860
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTVSTLVASAALAASVVAPAFAEETKTIPLNVTVSTQATEGALAAGGLGTVGGAAFGAVVVAGFVAAGSNGSSSTTTTE
SIO_010081: DSHI_RS19475
subclass of: SO_0000673
so part of: DSHI_RS19475
location: 69139..69381
location: region:69139-69381:1
so has part: feature:69139-69381:1:exon

WP_012187251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69139-69381:1:exon

DSHI_RS19480
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19480
old locus tag: Dshi_3861
so part of: sequence
location: 69592..70758
location: region:69592-70758:1
so has part: feature:69592-70758:1:exon
subclass of: SO_0000010

position:69592:1
position: 69592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70758:1
position: 70758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69592-70758:1:exon

DSHI_RS19480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19480
old locus tag: Dshi_3861
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008994567.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide sugar dehydrogenase
translation: MKIAVAGIGYVGLSLSVLLAQRHEVVALDISQERVARLNAGTAPIADPEIEAYLVEKTLDLTATTDPATAFAGARFIVVATPTSYDPETNRFDTSSVEQVVETALALAPEATIVIKSTIPVGFTRALRDRLGVENILFSPEFLREGKALWDNLHPSRIVVGGAGEAARVFADLLVEGALDRDVPVLFTRPTEAEAIKLFANTYLAMRVAYFNELDSYALAHGLDSRSVIEGVCHDPRVGNHYNNPSFGYGGYCLPKDTKQLLANYAAVPQNMISAIVEANTTRKDFIAEQVLALAPKSVGIYRLVMKAGSDNFRDSSIQGIMKRLKAKGIEVTVFEPELPDETFFNSRVERDLAAFKAGADVIVANRMDDAIRDVAEKVFTRDLFGES
SIO_010081: DSHI_RS19480
subclass of: SO_0000673
so part of: DSHI_RS19480
location: 69592..70758
location: region:69592-70758:1
so has part: feature:69592-70758:1:exon

WP_044029446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69592-70758:1:exon

DSHI_RS19485
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19485
old locus tag: Dshi_3862
so part of: sequence
location: 70763..72700
location: region:70763-72700:1
so has part: feature:70763-72700:1:exon
subclass of: SO_0000010

position:70763:1
position: 70763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72700:1
position: 72700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70763-72700:1:exon

DSHI_RS19485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19485
old locus tag: Dshi_3862
inference: COORDINATES: protein motif:HMM:NF019552.2
GO function: GO:0016829 - lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heparinase II/III family protein
translation: MTSYIMTAAQQAPDGDAKDLKQALQKAFERHAGRLPADGSEVMSSINASVAVRLFALMYMRGVQHRLMPDNESAVLCEALCKTVCEVEITDKFDDMFVSNFVLGLIVFLDLVQDDLHPDTRAGLVAKIAECRDWLSEARHRKVFGTRETEGTYAWNHSACAAAGLALSVIWTRDSQADWTDTDFHDVDFGLRRIEDYFLHGIRETGVPYEGFYYCGAVFRVLGPFDILVRKDAEVERRYRRIRDRHKRKLGQLLDWYESGTIVNQRALLSYNHSLYDAHPAVNGFLTFFRSEFEVKAGRMWSRLMAKGTSLQFVERSRDWGDNTLHEALLFLHPKGYSAPRNKVQTLLSRTEGYGLLVSEDASSRLFVKASKLLIGPHNQSDAGHVSWVCNGDAVLIDAGPGRKVRDASKKWAEYSKGTYRTEGSGASSYGHNAVLIDGRGQLPSGEGDGIEGRLSYVRQTEDFWLLGTDARAAYNKDEYNPVQVADRHVAFSKAAGAYLILIDRVVPQAPGTHRFQRLLQFADPAQVVEEDGPGRMAVTSGGTVYDLWTLSPTGPLSTVYEEEKFQMPIKTRGVLAHGVEAEDLWMYTVLAARGSAGVPTDVSLRPAEDAAFGAALQLVLEGGDTRLLALSRTTGELERISDDG
SIO_010081: DSHI_RS19485
subclass of: SO_0000673
so part of: DSHI_RS19485
location: 70763..72700
location: region:70763-72700:1
so has part: feature:70763-72700:1:exon

WP_012187253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70763-72700:1:exon

DSHI_RS19490
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19490
old locus tag: Dshi_3863
so part of: sequence
location: complement(72755..73885)
location: region:72755-73885:-1
so has part: feature:72755-73885:-1:exon
subclass of: SO_0000010

position:72755:-1
position: 72755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73885:-1
position: 73885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72755-73885:-1:exon

DSHI_RS19490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19490
old locus tag: Dshi_3863
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF016145.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide pyruvyl transferase family protein
translation: MKNPYISSLYPEVPGPPFPKTQEYLQCAGNNLGNFMFCSSVRRIVRTTTHPRGDFRRLDLKTIAAECDGIVIAAANWLQPKQNYGGLADQIEKANVPAAITGIGAQSSGGKIPELLPGMLRLLKVVSERSHSISVRGPFSAEVLNHYGIQNVTVTGCPSLLWHRDHPAEITRLPRDGRVGRVTLNGTLHRFDIPKTPGKVVKLTRFTLLQAMAWGCDYVVQNERPFLQAHLGELAEDDQDSWDFLHYVFDEPDRAILKTYLERHIQAFPNIPEWMAYCANHDLVLGSRLHGVIVGLLSGTPGVLITHDNRTEEMGRFAGIPTITAEDFMSRPKIDPDAILAEADFDAFNARQKDYFRDFVAWFDANEIPHRLTVTP
SIO_010081: DSHI_RS19490
subclass of: SO_0000673
so part of: DSHI_RS19490
location: complement(72755..73885)
location: region:72755-73885:-1
so has part: feature:72755-73885:-1:exon

WP_012187254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72755-73885:-1:exon

DSHI_RS19495
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19495
old locus tag: Dshi_3864
so part of: sequence
location: complement(73902..74681)
location: region:73902-74681:-1
so has part: feature:73902-74681:-1:exon
subclass of: SO_0000010

position:73902:-1
position: 73902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74681:-1
position: 74681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73902-74681:-1:exon

DSHI_RS19495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19495
old locus tag: Dshi_3864
inference: COORDINATES: protein motif:HMM:NF012888.2
GO function: GO:0008146 - sulfotransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfotransferase domain-containing protein
translation: MKAPNLFILGAQKAGTTYLGKAFSHHPEIFFSEPKELLFFHKPGLTRKDYRTYLLDYFAEAEDQPWRGEGSTTYLQWPEALPQIKRFVPGRPKFIVCLRQQTEKSVSFFIHNWRRDRYAPGQTITETVPMPIAFSPLMTGLYAPSIKRWLAEYPREDFLFLNFDWLREDPGKFVTAATDFLGVAPTTDIPDKLVNAGLPLVWEDDVLTIAKTPEPGQVKPVFTPEELHEIHAMFQDDITKTEDLTGLDLSAWREMPKFG
SIO_010081: DSHI_RS19495
subclass of: SO_0000673
so part of: DSHI_RS19495
location: complement(73902..74681)
location: region:73902-74681:-1
so has part: feature:73902-74681:-1:exon

WP_012187255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73902-74681:-1:exon

DSHI_RS19500
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19500
old locus tag: Dshi_3865
so part of: sequence
location: complement(74804..75793)
location: region:74804-75793:-1
so has part: feature:74804-75793:-1:exon
subclass of: SO_0000010

position:74804:-1
position: 74804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75793:-1
position: 75793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74804-75793:-1:exon

DSHI_RS19500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19500
old locus tag: Dshi_3865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017933424.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERLYIHIGAPKTGTTYIQHVLSKSAHALAAHDFVYLEASRLYAGHHCLAFAMQGEDNPQTHEPIDLAAELDSLTTEIDGTRARFGILSSEEFFICPEGAIAALRTALGDLPVTIIAFVRRSDDFLLSYHNERMKKFTKVFTHSIKDMIADRTLWPREMAFRTNLLTWARVFPETPPRVHAYEAGNPLVTLLGDLGIHSGIGIPPKMRPNRSKPAKAIALLRLLKLADWPADDRGRVCTALFDAFAEDTTPMIGPRDRARILQGNDRELSGLFESLGLEDPYADIARRLPATEVRPVTEIPVAALIDEAEAGTGCDFSNLRAFAAQAAE
SIO_010081: DSHI_RS19500
subclass of: SO_0000673
so part of: DSHI_RS19500
location: complement(74804..75793)
location: region:74804-75793:-1
so has part: feature:74804-75793:-1:exon

WP_012187256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74804-75793:-1:exon

DSHI_RS21545
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21545
old locus tag: Dshi_3866
so part of: sequence
location: complement(75905..79813)
location: region:75905-79813:-1
so has part: feature:75905-79813:-1:exon
subclass of: SO_0000010

position:75905:-1
position: 75905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79813:-1
position: 79813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75905-79813:-1:exon

DSHI_RS21545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21545
old locus tag: Dshi_3866
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF024831.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MNANADSMQRDRTDLEASGLFDPAWYLETYPDVAQLGMDPLEHFLWLGARLNRSPGPTFDAAAYRADYADVARADYNPVLHYIRYGRPEGRKARAPGLTIPPLAESAGASAPFRRLTGHRARRPGHPTVLLVAHIVGHQLYGSERSLLDMLDGLAAMDANVIVAVPSTRNKAYIELLRARACAVSVLSYGWWRAGTAPDETVIATFARVITEERIDIVHANTIMLREPLIAARRLGLPAVVQARELIRHDAKLLELIGLSADEIIAALWENCDVMIANSRATAACFDTETRRSAVVYNTADMTALQALPPPPAEAPLRVGMVSSNVPKKGLADFAEVARLVAAELPDAEFLLIGPQHEHTEAIEARIADGSLPRSLRVAGYRDTPAEAMAELDLVLSLSHFQESFGRTVLEAMAAGRPVIVYDHGAPPELVVSSKTGQVVPFGDIQAVADQVLAYGRDRKRLLVDGLRAADHAETTFGRTAYNAAMAAAYAPLLQELARDAHRPEQMVLRARDLPVKIPRDTLKVAYFCWHFPVPSETFVLNELRILKAQGIDVTVFCRDSPYPDFTPDFDITWEQVHDADHLARRLTETGRDVVHGHFVYPTVTEMVWPAARIANIPFTCIAHAQDIFRYRNAVANRIDEISADPLCRQIFTLSRFHRQYLVDRGVRPEKVTINSNCIDPELFSGGKIPDRPARRTRSVAAVSRFADKKGLEVLVRAGKLLEDDGITINIHGYGPLEDLYRQIIAEQEITNVTIHGPVEGRAALLEVFRTHDLFAVPSVRALDGDMDGIPTTLMEAMAAGLPVLTTPVAGIPDLVRDGITGMLSEDATPEALAAKIREFYALPEIAVQVMIEDAEALLRRNHNGPDLVNTLLRFWAGETIDLMIVSWNNLAQTREVIRRLYEYTDLPFHLIVCDNGSDPPALAHLLSVYAARTNFTLILNRENAFVGPGTNKCIAQGDSDYMIYVCGKEGMTTRHGWEKSFVTYMDAHPRVGQAGTLCYSPSYLFGRDYPEGVALFPDFRNPGFAADNPDRPFSHVQGGFFVIRRATYDEIGGFSDAVPHSYTDVEFSYYVESCGWELGTVPGLMALFNKTRPGLEARVDEHHGALHPPNLDDLPWLDRIARREVRHCNMCGHQAPAFEGGDAEARCAGCGSDRRARSLHRVLAETILLYRRLPGLGVNLPAPLQGFWSDQFQGPMLPLEAFTDPLSRGQTLPNRAGALQLACLNDVLDDVALRGAALAETARLLAPGATLFVAGATPLDTLEAEITAAGFTPAGRKRPCSAVLRFDWIEIGLYTRAGDTQ
SIO_010081: DSHI_RS21545
subclass of: SO_0000673
so part of: DSHI_RS21545
location: complement(75905..79813)
location: region:75905-79813:-1
so has part: feature:75905-79813:-1:exon

WP_012187257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75905-79813:-1:exon

DSHI_RS19510
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19510
old locus tag: Dshi_3867
so part of: sequence
location: complement(79818..80708)
location: region:79818-80708:-1
so has part: feature:79818-80708:-1:exon
subclass of: SO_0000010

position:79818:-1
position: 79818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80708:-1
position: 80708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79818-80708:-1:exon

DSHI_RS19510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19510
old locus tag: Dshi_3867
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKTSTTKTVAASRRRSATGSGGSTPPRVSATKAEVVEILLETQKKLLEAETALGTRTRTISALEDELAAARAEADRAETDAYAAQVEIRILEGARDAAHARLAEARTEVLELTRVLARMQEHRDQDAARIAELSDRLTKAEGSGNSHLEMLQQELATARAKAGNLPDLEQTVARQTQQLATQAQEIVELSRLLSEAEARADDSDRAVHAAGTWLAPLLGPLLSHPSGAPFSEEEYTEYAARIVASGAFDPDWYNMTNPDVAESGSDPARHFLQYGLAEGRAPRDLRVPHQPPEAE
SIO_010081: DSHI_RS19510
subclass of: SO_0000673
so part of: DSHI_RS19510
location: complement(79818..80708)
location: region:79818-80708:-1
so has part: feature:79818-80708:-1:exon

WP_012187258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79818-80708:-1:exon

DSHI_RS19515
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: galE
locus tag: DSHI_RS19515
old locus tag: Dshi_3868
so part of: sequence
location: complement(80804..81883)
location: region:80804-81883:-1
so has part: feature:80804-81883:-1:exon
subclass of: SO_0000010

position:80804:-1
position: 80804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81883:-1
position: 81883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80804-81883:-1:exon

DSHI_RS19515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: galE
locus tag: DSHI_RS19515
old locus tag: Dshi_3868
EC number: 5.1.3.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008186594.1
GO function: GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO process: GO:0006012 - galactose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-glucose 4-epimerase GalE
translation: MTQTILLTGGAGYIGSHTYVALKAAGFEVVILDDFSNAARDVPDRLELITGAPVRLYEGSVLDRGLLARLFTETRIDAVVHFAARKAVGESVAMPLAYFETNCTGLVGLLQEMEAACVHRLVFSSSATVYGIPDVTPTPETAPHRHMNPYGLTKITGELILDALATSDPKWAFGTLRYFNPAGAHGSALIGEDPSDIPNNLMPYIAQVAMGQRPHLQVFGDDYPTPDGTGVRDYIHVEDLAEGHVLSLKSLLETGESHLVNLGTGRGYSVLEMVAAYSAACGRALPYRIVDRRPGDVPIYCATVERARALLGFEAKRDLAQMCASSWAWIQARAQANAAGRPTPPRQDGPYRPRGTPSA
SIO_010081: DSHI_RS19515
subclass of: SO_0000673
so part of: DSHI_RS19515
location: complement(80804..81883)
location: region:80804-81883:-1
so has part: feature:80804-81883:-1:exon

WP_012187259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80804-81883:-1:exon

DSHI_RS19520
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19520
old locus tag: Dshi_3869
so part of: sequence
location: complement(81946..83121)
location: region:81946-83121:-1
so has part: feature:81946-83121:-1:exon
subclass of: SO_0000010

position:81946:-1
position: 81946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83121:-1
position: 83121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81946-83121:-1:exon

DSHI_RS19520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19520
old locus tag: Dshi_3869
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF016145.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide pyruvyl transferase family protein
translation: MKRPYISAISPLPGDDATRAPEAFLDATGQNTGNLIFSAALRRLVRGADFDITGPEAFARLRETCDGVVIAAANWLQPGRDLGEMAALIEQVDKPTVLVGLGAQAQDGRIPELPAGTRRLLAVVSERSGAISVRGDFSAEVLDHYGISNVTVTGCPSLLYHLDRPAAIARAPGDGPLRLGLNGLLPPQRDGPRMDLARFMLGETRRLGAAYVAQTELPLVRLARGTAQEADWPHLARALDVDLTLDGPNRAEAAAWAARRLRIFGNAPDWIDWARGRDLVIGTRLHGVIAPLLAGTPALLLTHDSRTQEMARQAGLPALPFAQVRQAGRIDPRALWARVDPDRFNTRQRAYFSAFCRFFDAVGIPHRLQPPQTTTPPTSSGTPPPRHGPAH
SIO_010081: DSHI_RS19520
subclass of: SO_0000673
so part of: DSHI_RS19520
location: complement(81946..83121)
location: region:81946-83121:-1
so has part: feature:81946-83121:-1:exon

WP_012187260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81946-83121:-1:exon

DSHI_RS19525
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19525
old locus tag: Dshi_3870
so part of: sequence
location: complement(83556..84359)
location: region:83556-84359:-1
so has part: feature:83556-84359:-1:exon
subclass of: SO_0000010

position:83556:-1
position: 83556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84359:-1
position: 84359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83556-84359:-1:exon

DSHI_RS19525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19525
old locus tag: Dshi_3870
EC number: 3.4.21.-
inference: COORDINATES: protein motif:HMM:NF012318.2
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trypsin-like serine protease
translation: MLRLVAVLLLCLTGLAQAQAPPAPDPGNDRVYRPGLSAICALGQRQSAGCAAIRAREILDAAAPPWSAIGRVNFGGLSQRSHCTGTLVAEDRVLTAAHCLYNAARKRWLPPESLRFVAGYQRSTGIGVAGVTGYVLDPVHDPDSPVFHGAVATDWAVLVLDAPLGATVGTLPLAGPEAAGEITLAGYAGLRPHVLSRARACPLESARAGGAEILATSCAAMQGDSGAPLLVMTPTGPAIRGVLSAVTTTPDGPRALAIPIDTLPVTP
SIO_010081: DSHI_RS19525
subclass of: SO_0000673
so part of: DSHI_RS19525
location: complement(83556..84359)
location: region:83556-84359:-1
so has part: feature:83556-84359:-1:exon

WP_012187261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83556-84359:-1:exon

DSHI_RS23015
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS23015
old locus tag: Dshi_3871
so part of: sequence
location: 84768..88262
location: region:84768-88262:1
so has part: feature:84768-88262:1:exon
subclass of: SO_0000010

position:84768:1
position: 84768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88262:1
position: 88262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84768-88262:1:exon

DSHI_RS23015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS23015
old locus tag: Dshi_3871
inference: COORDINATES: protein motif:HMM:NF012573.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RTX toxins and related Ca2+-binding protein-like protein
translation: MAQFSEITADHFGMIYTGNMPNRVSLENFIEITNYTGIESIRWPGGTLSEIGFRNAGDENYYDLTADNLLENQSGTGAIPAGLSEILSVAVEEDLGVSIIIPTLCYTDPIKNGMMESPNLDLAFQEYYDFLEKLLVEKAWGKVPANFTLEIGNEASLHFGENQDKYGQIANTFLAAYDKILGDYAMDDPVDIAIQMGISQNQSMNQIVIAQIDDDFSHHIDAVRNHELNKNHGLSWDKGWAGLNDASKQYFDEWLEKTGKDERSLDHYVSAWNTGTPTVRDQDGNVKEPDPIADDYGMKELSAVVEMFANFSLLGVDKASHWGVAVSEAHPNETSSVNRDGSLNYTPKAEVIRLVHESLIGTTLSHDITKDADGNQIRAGYFRSDIDGENDPTPYRVFLFEDDSKYVMFIAANRFEMAETDVEMEVEIILSDYIGDPDVIGFAWSEQITVDDPVFNFSDTLDETSVLATRHSIQHWDEGFTVNLSQNYELVRVIASKQSPGKGNLHLWGSDAGDALQGGGGSDTLEGNAGTDMLFGANGGDILRGGAGDDTLLGEAGDDDLQGGDGADILHDGDGRDDLRGGTGADLFVLAADGLEDVIWDFNPEEDQLDLSAWTTLRATSQITFEATSTGARLLHGNEVLILHSSGGTSLDRTFLPSIWLLNSREVPLPDTVPAVFEQAGAPMPRAFQANAVHGNDHYNITGNGTDENVRAGAGRNLLVDGAGADRMVGSAGADIFVLVADGALDEIVGFNPDEDRLDLSGWEMLRSTMQLSIAAIEDGARITYRDETLVLRSVDGAPLDPGVLAGLDMLELSRVPILPTVLQESFQGSSLEELLEGNAGVNILRGRAGNDRLMGHGGDDWIEGGIGADTLEGGADDDLLFGNAGHDTLLGQSGNDFLEGNAGNDLIRGGSGHDWLTGGQGNDHLLGEIGDDILWGLGGSDTLEGGDGADQLEGGDANDWLFGDAGNDTLNGGVGFDWLDGGDGNDILTGLEGFDSLFGGAGDDSLSGNAGNDLIEGGAGDDTLQGGQGIDVLRGGAGNDLIRGQTGFDELFGGAGNDTLQGGEGNDRLAGEAGNDVLTGGIGADVFVFDAGTDVITDFSLMVDRLALDGAALGIAGLDGATVLERFSQRDAEGVQLRFETGDGLDLEGVFNLTRLADLIDIF
SIO_010081: DSHI_RS23015
subclass of: SO_0000673
so part of: DSHI_RS23015
location: 84768..88262
location: region:84768-88262:1
so has part: feature:84768-88262:1:exon

WP_012187262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84768-88262:1:exon

DSHI_RS23020
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS23020
old locus tag: Dshi_3872
so part of: sequence
location: 88393..94041
location: region:88393-94041:1
so has part: feature:88393-94041:1:exon
subclass of: SO_0000010

position:88393:1
position: 88393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94041:1
position: 94041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88393-94041:1:exon

DSHI_RS23020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS23020
old locus tag: Dshi_3872
inference: COORDINATES: protein motif:HMM:NF012573.2
GO function: GO:0005509 - calcium ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: calcium-binding protein
translation: MTTYNVRGIAVTYDAFVGSDLPINLGSAILQLTGSDGATFSYELGTPPEPGAPPRAVLDTSEIIGARLSGEPLDSEEEFILNLRWRDGPITRETTVLVLYVEDSPEFGVDTDYIFYLGGAPLPELRTVQDWEAFDDTILSIAPPTSGPFAPGADIVIEDLPSLLGPTKTFTLQGTMIVYDDNVGFGEADDVIPAEVVFTAPEDAVFSYTVEETGDPDTPFILTLDSGQILGAIFNGNPDIEIAGELFLDVTWQDAGNVTRETTVLALFGFDPDNFFVSFDYIFYLDGHPLPDFQTVQDWEDFDDSVTAVDVPSSGPFAPETDIALADLFGVVVADAPGNIILGTEGDDNSDLPPGEDIFGTDLDDDIRALAGDDFINVSFGFDLIDGGTGFDVMNYEGSGPVFVNNTGATVIDDWNGEEAEVGPFQVLKGFGGFEGVDGLTDIEAFELSQFHDVAYLGDNADGLTFAYDLAGDDKVVAAQSGLTATTFIAGSGNDMFIGSSNPFDFLDYGEQAEDDDDAAGPAFRGIFVEFTGGGNGTATDPWDGFDMFEGIEFVGGTRFQDIFVGDETDNIFHGEGGDDIFIGGAGNDFIDGGPGETEDDEDFDTLIYANETGEAGIFADMGTGLIVDTFGDTDTVVSIDRVIGTMDEDVFVGSDFQDFIQYVGLAGEDVFFAGAAYETLRYREDDDFGALHGVYVDLAANFAIDGFGDEDTIITDDGEIDRVRGSDFNDVLATSNVGARLEGEDGDDFLKGRLGEDRLEGDAGNDTILAGAGDDQLSDGRGFDYLNGGAGWDLFFRDIGQDFEDFSWTPVVDLTEGKFFDPSEDPALFDILENIEAVSLEGNFNMTLIGDDGDNFLESDAGNDLLEGNGGDDELDGGDGDDTLNGGDGNDLLFGGEGNDGLYGDAGDDELYGEAGDDTLEGGDGDDYLNGGGGNDVINGGDGDDFIDIGGSGVATVDGGEGWDTYFVDLTGFNPGDFIYELNLITGYAGVFGNPFNSDFVADVEEILVEGDLETRLTGTNEREIFNGGDGNDEITGNGGDDELIGNDGNDTLIGGDGRDFLAGGDGDDTLDASTGAASTQGFGDYIRAGLGSNTIIGHAALFAAGEGIDISYADLAGIGGVTITVGANGTGTTVSGTPGQVDDTFTFAHYFEGSRDGDTFTGSNNADFEGWVGLDGADDFDGGGGFDVLFYDTDEAYGGAGGIIATFADGAGTVEDSWGNLDTFTDIDEIVGSQSDDVMEATGSTGVRFDGEDGDDLLIGTDADDVLRGGDGDDEIHAGLGTDEIDGGEGSDTLVTDVTGLGPDQITVDLDPLAGSQTIAGEGPGAADTLVGTENFTLTGDWDATVIGSDAANIITTGGGADDITTGLGRDTVNAGAGDDVIDASAGDLASEGFGDRIRPGLGSDTVLGSATLYAQGGGINLAYFDVSGVSGLTITVGVNGSGTVVSGTAGLVNDSFTFADVFGGSQDDDVITGTDRAEYEGFQGYGGNDVIDGRGGFDEVYYLNASGAVQINLQNGSVTGADGTDTLLNIESIFASHHDDTIQGSTARDQVNGGDGDDDINARGGFDLIDGGAGNDTINGGVGSDVLNGDGGNDTIIAGDGFDEVDGGAGDDLLKGNAGNDFIAGGAGADRIEGGIGRDMLHGGDDDDDISGAEGFDEIFGDAGDDLLRGNAGNDTIEGGAGDDRIEGGIGADTLRGGVGNDEIVASEGFDALFGEDGDDTLLGNAGNDLLEGGAGMDALFGGQGADTLRGGDGDDILRGETGADTLIGGVGDDELRGGQGGDRLSGGAGNDILVGGSGADVFVFEGGVDTITDMSLIVDRIEIDGDALGIAGLTGAQVLDQFAEAIGPSTQIVFDAANRIDLQGVTNLTQLEGLIEVI
SIO_010081: DSHI_RS23020
subclass of: SO_0000673
so part of: DSHI_RS23020
location: 88393..94041
location: region:88393-94041:1
so has part: feature:88393-94041:1:exon

WP_044029447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88393-94041:1:exon

DSHI_RS19540
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19540
old locus tag: Dshi_3873
so part of: sequence
location: complement(94097..94681)
location: region:94097-94681:-1
so has part: feature:94097-94681:-1:exon
subclass of: SO_0000010

position:94097:-1
position: 94097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94681:-1
position: 94681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94097-94681:-1:exon

DSHI_RS19540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19540
old locus tag: Dshi_3873
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MICDITPAYGVLNTIIYKEMQRVAPAKFLFLMRDPVDRLWSQVRMGVAARAKAPEDPADFEAACLAWVRERHRTDKIENIHRADYARTLEKLENALPVETRDTQLLTLFFEDLFCQASADRICAFLGIAPVTAAPDKVANPGRPLRLPEEAEARLYDGLRAQYAFAEARFGRAGLPAVWRDRMARLECVPPPRR
SIO_010081: DSHI_RS19540
subclass of: SO_0000673
so part of: DSHI_RS19540
location: complement(94097..94681)
location: region:94097-94681:-1
so has part: feature:94097-94681:-1:exon

WP_012187264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94097-94681:-1:exon

DSHI_RS19545
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19545
old locus tag: Dshi_3874
so part of: sequence
location: complement(94737..95561)
location: region:94737-95561:-1
so has part: feature:94737-95561:-1:exon
subclass of: SO_0000010

position:94737:-1
position: 94737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95561:-1
position: 95561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94737-95561:-1:exon

DSHI_RS19545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19545
old locus tag: Dshi_3874
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007406871.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MSRQTRRTGTFLVTREHKRFVEFANAVRRNATIGLCHGRAGVGKTLSARRYANWDLIEPLITTWGRREDSDKKVYAASSRARTLFYTPPVGGSISALRKDIQPFIMRLCVCIDSYGNPKWAERPLTPLGLIELVIIDEAERLTMTGLEFLRDQFDRSDAGLILIGMPGIEKRMSQYPQLYSRIGFVHEYPPLSKDEMQFVLQRQWRKWGFGQDDADFTDDRVAAAIIRLTAGNFRLLQRLFMQIERIARINEMAAITEDVVEAAAQTLVIGNAN
SIO_010081: DSHI_RS19545
subclass of: SO_0000673
so part of: DSHI_RS19545
location: complement(94737..95561)
location: region:94737-95561:-1
so has part: feature:94737-95561:-1:exon

WP_012187125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94737-95561:-1:exon

DSHI_RS19550
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19550
old locus tag: Dshi_3875
so part of: sequence
location: complement(95558..97009)
location: region:95558-97009:-1
so has part: feature:95558-97009:-1:exon
subclass of: SO_0000010

position:95558:-1
position: 95558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97009:-1
position: 97009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95558-97009:-1:exon

DSHI_RS19550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19550
old locus tag: Dshi_3875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003939267.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Mu transposase C-terminal domain-containing protein
translation: MTALPEDRRAEALRRFNILRQHLIDEVPLTEVARVSGIPLRTLQRWTSRYQRFGLAGLARAPRSDAGQRRLSSELVELIEGLALHKPRLSTAAIHRRIIPIVKSRDWPVPSYATIHSIVNSLDPALVTLAHDGAAAYRDRFEMIHRHRAERPNAVWQTDHTQLDLIILDTNGAPVRPWLTIVLDDHSRAVAGYAVFVGAPSAIQTALALRQAIWRKDTPSWPICGLPDVLYTDHGSDFTSKHLEQVAADLRIELVFSTVGRPQGRGKIERFFGTINTELLPELPGALSNGKPASPPRLSLGELEVAVKTFVTAVYNARKHSEIDVPPNEAWRGDGWLPRMPNSLEQLDLLLVMALKTRQVRRDGIRFQGLLYTDPTLAAYVGKTVNIRYDPRDITELRVFHRDRFLCRAVSAHHAHHTISLKDIQQARTARRKALRNEITVKSRQITEFLPKPAPPPSREKQNPVSPDAPRQKLVLYKTDKTP
SIO_010081: DSHI_RS19550
subclass of: SO_0000673
so part of: DSHI_RS19550
location: complement(95558..97009)
location: region:95558-97009:-1
so has part: feature:95558-97009:-1:exon

WP_229941942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95558-97009:-1:exon

DSHI_RS19555
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19555
old locus tag: Dshi_3876
so part of: sequence
location: 97190..97789
location: region:97190-97789:1
so has part: feature:97190-97789:1:exon
subclass of: SO_0000010

position:97190:1
position: 97190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97789:1
position: 97789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97190-97789:1:exon

DSHI_RS19555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19555
old locus tag: Dshi_3876
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013635075.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTKTRVGYARCSTDKQDLAAQRTALLALDVAEDRIYTDHGLTGTNRERPGLAQALAAVREGDTLVVPKLDRLARSVPDARAIADELEKRGVKLALGASVHDPTDPMGKMFFNILATFAEFEADLIRMRTKEGMAIARAKGRLKGKKPKLSDRRQAELRRMYDTGDYSISDLAELFDVSRPTVYRVLQRTPSADASSAAV
SIO_010081: DSHI_RS19555
subclass of: SO_0000673
so part of: DSHI_RS19555
location: 97190..97789
location: region:97190-97789:1
so has part: feature:97190-97789:1:exon

WP_012187123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97190-97789:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 398580
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00059
inference: COORDINATES: profile:INFERNAL:1.1.4
note: TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: thiamine pyrophosphate
so part of: sequence
location: 98086..98208
location: region:98086-98208:1
so has part: feature:98086-98208:1:region

position:98086:1
position: 98086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98208:1
position: 98208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98086-98208:1:region

DSHI_RS19560
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: thiC
locus tag: DSHI_RS19560
old locus tag: Dshi_3877
so part of: sequence
location: 98310..100118
location: region:98310-100118:1
so has part: feature:98310-100118:1:exon
subclass of: SO_0000010

position:98310:1
position: 98310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100118:1
position: 100118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98310-100118:1:exon

DSHI_RS19560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: thiC
locus tag: DSHI_RS19560
old locus tag: Dshi_3877
EC number: 4.1.99.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020042767.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphomethylpyrimidine synthase ThiC
translation: MKDLTPTVTTGPLPASRRVYQPGTLHPQIRVPMREIDLHPSAGEPPVTVYDSSGPYTDPSAKIAINGGLPRLRADWIAARNDIELYEGRHVRPEDNGFAEGARLVPEFPVRHKPLQAKAGRAVTQMAYARAGIITPEMEFVAIRENLGRKAAKEALVRDGQDWGAAIPDFVTPDFVREEVARGRAIIPANINHPEAEPMGIGRNFLVKINANIGNSAVTSSMEEEVEKMVWATRWGADTVMDLSTGRNIHNIRDWIIRNSAVPIGTVPLYQALEKVEGIAEDLSWEVYRDTLIEQAEQGVDYFTIHAGVRLHMIPMTIKRVTGIVSRGGSIMAKWCLHHHRESFLYEHFAEICEIARAYDVSFSLGDGLRPGSIADANDEAQFAELETLGELTQIAWKHDCQVMIEGPGHVAMHKIKENMDKQLEVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNRDDVKIGVITYKIAAHAADLAKGHPGAQIRDDALSRARFEFRWEDQFNLSLDPETARSMHDETLPKEAHKVAHFCSMCGPKFCSMRISHDIRAEAQKDGMAKMAEKFRKGGDLYVPLDKVKEI
SIO_010081: DSHI_RS19560
subclass of: SO_0000673
so part of: DSHI_RS19560
location: 98310..100118
location: region:98310-100118:1
so has part: feature:98310-100118:1:exon

WP_012187122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98310-100118:1:exon

DSHI_RS22440
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22440
so part of: sequence
location: 100169..100390
location: region:100169-100390:1
so has part: feature:100169-100390:1:exon
subclass of: SO_0000010

position:100169:1
position: 100169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100390:1
position: 100390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100169-100390:1:exon

DSHI_RS22440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLAQRIPSQIVMHVAASVLLAANYIEVMHRIQWEFSRSTNARFLHLRKPPRPTPPKTPFKTQTVVEGFLACC
SIO_010081: DSHI_RS22440
subclass of: SO_0000673
so part of: DSHI_RS22440
location: 100169..100390
location: region:100169-100390:1
so has part: feature:100169-100390:1:exon

WP_157865441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100169-100390:1:exon

DSHI_RS19565
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19565
old locus tag: Dshi_3878
so part of: sequence
location: complement(100522..101904)
location: region:100522-101904:-1
so has part: feature:100522-101904:-1:exon
subclass of: SO_0000010

position:100522:-1
position: 100522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101904:-1
position: 101904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100522-101904:-1:exon

DSHI_RS19565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19565
old locus tag: Dshi_3878
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009824789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1182 family transposase
translation: MMGPRQEAQAALFYEFSLEEHVPQDHLLRSIDRHLDLSSIRGHLADFYSHTGRPSVDPELMIRMLLVGYCFGIRSERRLCEEVHLNLAYRWFCRLELTDRIPDHSTFSKNRHGRFRDSDLLRHVFEATVARCIEEGLVGGQGFAVDASLISADVQKQNSSNPEGWAAREIDPTDAPRAVREYLDTLDDEAFGAATTAKPKFTAHADPASQWTAARKGPAFFAYSDNYLIDTDHGIIVDVDASRSNKTAEVGAMRKMLDRTEDRFGVKPDWIAADTAYGSSDNLVWLALKRQILPFIPVFDKGERTDGTFSRSDFTWDDENDRYICPSGKEMRHTWRTYSDPARNAPAWKARRYRTRKSDCTGCALKAKCCPNSEVRAIHREKYEIVRDFARQCTASEYNPTAQRRRKKVEMLFAHLKRILGLGRLRLRGPCGVQDEFTLAATAQNLRKLAKLKPMVPATE
SIO_010081: DSHI_RS19565
subclass of: SO_0000673
so part of: DSHI_RS19565
location: complement(100522..101904)
location: region:100522-101904:-1
so has part: feature:100522-101904:-1:exon

WP_012187121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100522-101904:-1:exon

DSHI_RS21970
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21970
old locus tag: Dshi_3879
so part of: sequence
location: 102305..103117
location: region:102305-103117:1
so has part: feature:102305-103117:1:exon
subclass of: SO_0000010

position:102305:1
position: 102305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103117:1
position: 103117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102305-103117:1:exon

DSHI_RS21970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21970
old locus tag: Dshi_3879
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIDYNDLQSKGVDIAAAINETFLNKFATSHHTANPSLYSGKQRFTQFDNDIEIAFKANTPLTFDFSRQVSRARFKRLWLQHLKIKGVPESTKLDEVLTTPPNVSLGCESVIFEVKIFDGKSNDVLLTVDFDWSLLTLAAISLDDGKLSMEPVRIGFSQRMAIIEEAIAARVSSKLSTLGVQQKPERPATFGDPSDPVWCAKLEKMIILLLNQVLAVQIANFIAEFELPRAIEVADGIAIDARLFGDTQRQSSGRRSHYRATDWHGSSIV
SIO_010081: DSHI_RS21970
subclass of: SO_0000673
so part of: DSHI_RS21970
location: 102305..103117
location: region:102305-103117:1
so has part: feature:102305-103117:1:exon

WP_012187265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102305-103117:1:exon

DSHI_RS21975
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21975
old locus tag: Dshi_3880
so part of: sequence
location: 103401..103925
location: region:103401-103925:1
so has part: feature:103401-103925:1:exon
subclass of: SO_0000010

position:103401:1
position: 103401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103925:1
position: 103925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103401-103925:1:exon

DSHI_RS21975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21975
old locus tag: Dshi_3880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLDRLIRAEAEWWLRVENAKAGVVTGGVQLEADVAVGGGLKVSHFNIDPKKFGQWKDYGVGIELFPIPNFGVQAFPTFPASGVFINGRLLTTGIGLRFLGLPSWANDLISWITGFLTAPLLAIIRAVIARFRIRIMKYPKHFPGTGLEWTPNLNERLENVGPYLLLSGDPAFE
SIO_010081: DSHI_RS21975
subclass of: SO_0000673
so part of: DSHI_RS21975
location: 103401..103925
location: region:103401-103925:1
so has part: feature:103401-103925:1:exon

WP_012187266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103401-103925:1:exon

DSHI_RS19570
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19570
old locus tag: Dshi_3881
so part of: sequence
location: 104842..105309
location: region:104842-105309:1
so has part: feature:104842-105309:1:exon
subclass of: SO_0000010

position:104842:1
position: 104842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105309:1
position: 105309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104842-105309:1:exon

DSHI_RS19570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19570
old locus tag: Dshi_3881
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAEFDPDSSDVSPNGRKTGKTSSEQRQSDSNPDKQGGGNGRDHKATALAILDSKITRFLGLWALVTVLLVQIIKLFSRSFSFTENYSGILAITFILAAGIRYMAAQKLDLAGAVAVGVVLEGTVALFGLVGEFRRFGGPSCRTNRHSSTIASHET
SIO_010081: DSHI_RS19570
subclass of: SO_0000673
so part of: DSHI_RS19570
location: 104842..105309
location: region:104842-105309:1
so has part: feature:104842-105309:1:exon

WP_012187267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104842-105309:1:exon

DSHI_RS19575
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19575
old locus tag: Dshi_3882
so part of: sequence
location: 105261..105971
location: region:105261-105971:1
so has part: feature:105261-105971:1:exon
subclass of: SO_0000010

position:105261:1
position: 105261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105971:1
position: 105971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105261-105971:1:exon

DSHI_RS19575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19575
old locus tag: Dshi_3882
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005859586.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MPHQSPFKHHRFPRNMILCVVRWYLRYPLSYQDVVDLLAERGVTVDRSTVYRWVQKFGPELTKRTERHLRRTSVDWHVDETYVRVGGKWRYLWRAVDANGQMVNFRLTARRDAKAAKAFLNKAIERVRLHRPVTICTDKAHTYRRVIREINHRYDPHFDSIRHTDRKWRNNLIESDHAAMTRLLGYRQSFRSLRTAKATLSGSETIRTIKRGHIHNKQPGVKGEIAFIASLFAVVA
SIO_010081: DSHI_RS19575
subclass of: SO_0000673
so part of: DSHI_RS19575
location: 105261..105971
location: region:105261-105971:1
so has part: feature:105261-105971:1:exon

WP_012187268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105261-105971:1:exon

DSHI_RS19580
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19580
old locus tag: Dshi_3883
so part of: sequence
location: complement(106070..106648)
location: region:106070-106648:-1
so has part: feature:106070-106648:-1:exon
subclass of: SO_0000010

position:106070:-1
position: 106070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106648:-1
position: 106648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106070-106648:-1:exon

DSHI_RS19580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19580
old locus tag: Dshi_3883
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPGDKREAWTKRLARHRTGLAAMSFAESTVVPIPLETIVAPLMVGEHRHATTIALAIWLGCLAGATLFFGLGVWLAEPVVLPILDWLGLRSTFESILDDLGRDGLFWTIFLVSFSPAPMQIATLGAGAGHGNFLIFLAAIASSRGLRYFGLAVLAKLFGPKIAEWNIPTGRLVLGAVIIGGTIWGTLQMLGR
SIO_010081: DSHI_RS19580
subclass of: SO_0000673
so part of: DSHI_RS19580
location: complement(106070..106648)
location: region:106070-106648:-1
so has part: feature:106070-106648:-1:exon

WP_012187269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106070-106648:-1:exon

DSHI_RS19585
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19585
old locus tag: Dshi_3884
so part of: sequence
location: complement(106635..108044)
location: region:106635-108044:-1
so has part: feature:106635-108044:-1:exon
subclass of: SO_0000010

position:106635:-1
position: 106635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108044:-1
position: 108044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106635-108044:-1:exon

DSHI_RS19585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19585
old locus tag: Dshi_3884
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011568652.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MATE family efflux transporter
translation: MSSRDTDMTQGSVGGLLWRVSAPMSLGILGVLMVGLADAFFLARVGEVELAAVGFVYPVIVAVSAFSIGMSAGANTVLSQAIGRTESGNSLSCRALHAVGFGALIGLGVGSALWLVAPVLFTALGARGEVHAAILAYLPWWAASFPILVVTMILNAAFRAGGDGLTPSALMVATAVVNIAMTPLLVFGIGTIEGLGMAGAGIATLAARMLVGVLALGIAVRRGTIAFGAHTARGFTRSVRDIAAIGLPAAASRAVNPAGMALVTAAAATLGDAAVAGFGAAARVQALCLVPFFALSTGLAPIIGQAWGADMQGRARHALRLSAGFALGYGLCAAIVLWILADPIAQLMTDDGTAASYTAQYLTIVGWSLGGYGLVVTVNAALTARSKPGWALGLSLTRIGVIYVPLAWLGALTLGFTGILLAAVAANVIAAWLGMVFAQANSLLALRALPIRAPSDRLAHLRRNRHARG
SIO_010081: DSHI_RS19585
subclass of: SO_0000673
so part of: DSHI_RS19585
location: complement(106635..108044)
location: region:106635-108044:-1
so has part: feature:106635-108044:-1:exon

WP_012187270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106635-108044:-1:exon

DSHI_RS19590
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19590
old locus tag: Dshi_3885
so part of: sequence
location: 108221..109795
location: region:108221-109795:1
so has part: feature:108221-109795:1:exon
subclass of: SO_0000010

position:108221:1
position: 108221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109795:1
position: 109795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108221-109795:1:exon

DSHI_RS19590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19590
old locus tag: Dshi_3885
inference: COORDINATES: protein motif:HMM:NF024491.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase D-like domain-containing protein
translation: MLTSQDRSHQAENSDARIQVLITAAEAFPELERAFLAASSEIWASFRVFDLRTKLRSDAAKAIGETWFDLVEHTLSRGVAIHMAISDFDAIMAPRLHNHTWNSMRAFLAAAEIAGPQACLDVVGAAHPARAGRPHRVLVWPWVYRRLAEVVEDLNADTPDRRARRLEHLPGLARHVEKDDDGFVRAKRWPPADLLPVTHHQKLAVFDRKTVYIGGLDLDERRYDDPDHQRGRDETWHDVQLMVEGGALAREAQSHVEQFLKVTAGRGDPPPATELLTTVSRRHRVTTPFLGPKPVRNTLLEAHLARIESSEDLIYLETQFFRDIRIADALAKRKREAPSLDLIVVLPGAPEDVAFDGATSSDAKFGEFQQVRAFDRVQQAFGEDCIFCAPVRPEAYDTGKRDCLAGSPIIYVHAKLAIFDTTRAIVSSANLNGRSLSWDTEAGLELDDPEMVAHLQRRTFSHWYGEDAPEAFLAPDTAVSEWRKRAMRNLQAKPSARQGFLVPYDPEPARAFGRWVPGVPDALV
SIO_010081: DSHI_RS19590
subclass of: SO_0000673
so part of: DSHI_RS19590
location: 108221..109795
location: region:108221-109795:1
so has part: feature:108221-109795:1:exon

WP_012187271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108221-109795:1:exon

DSHI_RS19595
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19595
old locus tag: Dshi_3886
so part of: sequence
location: 110041..110658
location: region:110041-110658:1
so has part: feature:110041-110658:1:exon
subclass of: SO_0000010

position:110041:1
position: 110041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110658:1
position: 110658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110041-110658:1:exon

DSHI_RS19595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19595
old locus tag: Dshi_3886
inference: COORDINATES: protein motif:HMM:NF015674.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HdeD family acid-resistance protein
translation: MSNGATEHTTETPNAAERKAFVAGREAGSNRWLLYIVGGVSILAGVIAIAMPLLGTLTAAIVAGAALIASGLAGLFTALRRHEGWHVAAAFALALLSILVGIMIFLQPIAGIFALTTLVIAWFAASGVLRVYYGARMVRDGGGWMIGTGVLSIAVALLLWFGLPFSATWVLGVVLGVDLMLWGALLIAYAVRAGRWTAADPQEVG
SIO_010081: DSHI_RS19595
subclass of: SO_0000673
so part of: DSHI_RS19595
location: 110041..110658
location: region:110041-110658:1
so has part: feature:110041-110658:1:exon

WP_012187272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110041-110658:1:exon

DSHI_RS19600
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19600
old locus tag: Dshi_3887
so part of: sequence
location: complement(110663..111094)
location: region:110663-111094:-1
so has part: feature:110663-111094:-1:exon
subclass of: SO_0000010

position:110663:-1
position: 110663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111094:-1
position: 111094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110663-111094:-1:exon

DSHI_RS19600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19600
old locus tag: Dshi_3887
inference: COORDINATES: protein motif:HMM:NF012264.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c
translation: MNPFRITTLAVGCIVAATALFAQGNPERHESTEALSASTDGFLVNSGEEIYMVACAGCHQPQGQGALGAAQYPTLAANPRLQSARYPAWIVVNGMGAMPAFNDWLSNEQIVEVVTYIQQNLGNRYDSNLTPEEVQNLRDAPAP
SIO_010081: DSHI_RS19600
subclass of: SO_0000673
so part of: DSHI_RS19600
location: complement(110663..111094)
location: region:110663-111094:-1
so has part: feature:110663-111094:-1:exon

WP_012187273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110663-111094:-1:exon

DSHI_RS19605
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19605
old locus tag: Dshi_3888
so part of: sequence
location: complement(111091..112716)
location: region:111091-112716:-1
so has part: feature:111091-112716:-1:exon
subclass of: SO_0000010

position:111091:-1
position: 111091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112716:-1
position: 112716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111091-112716:-1:exon

DSHI_RS19605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19605
old locus tag: Dshi_3888
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016846403.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavin monoamine oxidase family protein
translation: MQDDPRFQMSRRDLLQLIGVAGGASAMMGAMTTMGHSLPSPYDGPPALEGAPQGEKVLVLGAGLAGMVAAFELRRAGYEVEILEYQSRAGGRCWTLKGGDSFRELGGYEQTCNFSQGQYINIGPWRIPHHHRAVLDYCQRLGVELEIFVQEDQNAFLHSPDAFGGKPQRYHNIWADYVGGITEMLAKSVNQGAFADQITAEDAEMLLESLKSFGVLDGQYRYTERLEVSSYRGYPNSGAPGGGLLDAAPTPEKPIELKDILDSRFWQYLRNHTTYRHHAPMFQPKGGMEEIAHAFEREVGDLITHNARVTRIMQDSAGVTVDWTETGVSGKEHRSTADWCVCTIPFTVLSQIEIDVAADMRAAMRELHYHESVKAGFEMKRRFWEQDLAIYGGITLTDLPIAEIGYPSNEMHSTGPGVLLAAYVYGPQAYAYNSMSPEERIESIRNQLKIIHPQAAEEFSSGVALSWHRVPWMLGCYSNWDTRDESYRAAARVDRRIVCAGEHLSYLPGWQEGSILSSLDAIRRLNDVAASGLYSTQGGNQ
SIO_010081: DSHI_RS19605
subclass of: SO_0000673
so part of: DSHI_RS19605
location: complement(111091..112716)
location: region:111091-112716:-1
so has part: feature:111091-112716:-1:exon

WP_012187274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111091-112716:-1:exon

DSHI_RS19610
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19610
old locus tag: Dshi_3889
so part of: sequence
location: complement(112739..113458)
location: region:112739-113458:-1
so has part: feature:112739-113458:-1:exon
subclass of: SO_0000010

position:112739:-1
position: 112739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113458:-1
position: 113458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112739-113458:-1:exon

DSHI_RS19610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19610
old locus tag: Dshi_3889
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012522144.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase assembly protein
translation: MDTYVPFCGAPPMPAELWSRWTLDPYLLSGLALAGLAGFVLLKDKARFGLAWGLVGLLFVSPLCAASIALFSARVGQHILLTLVAAPILAAALPRMRLPALPCAILFAVLFWVWHAPGPYQATLESDLGYWSMHLSLFGSATLLFAAMRARPHMALGAAALTGAQLTVYASMLTLAPVAWHDWHLATTLNYGLTALADQQLAGALMWVAGGALFLTSIASLALRFFKETPSGPAPTQTR
SIO_010081: DSHI_RS19610
subclass of: SO_0000673
so part of: DSHI_RS19610
location: complement(112739..113458)
location: region:112739-113458:-1
so has part: feature:112739-113458:-1:exon

WP_012187275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112739-113458:-1:exon

DSHI_RS19615
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19615
old locus tag: Dshi_3890
so part of: sequence
location: complement(113475..113804)
location: region:113475-113804:-1
so has part: feature:113475-113804:-1:exon
subclass of: SO_0000010

position:113475:-1
position: 113475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113804:-1
position: 113804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113475-113804:-1:exon

DSHI_RS19615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19615
old locus tag: Dshi_3890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTNLFRIATPITLWAIHFIAIYALISAACSPRGLLGPDTMAAVAALVTGTIAVAILVLLILSGRGMRRVGPDGPELPLAQAAWWSALISFLAVLANVWPILRVSGCTG
SIO_010081: DSHI_RS19615
subclass of: SO_0000673
so part of: DSHI_RS19615
location: complement(113475..113804)
location: region:113475-113804:-1
so has part: feature:113475-113804:-1:exon

WP_012187276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113475-113804:-1:exon

DSHI_RS19620
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: ctaD
locus tag: DSHI_RS19620
old locus tag: Dshi_3891
so part of: sequence
location: complement(113801..116362)
location: region:113801-116362:-1
so has part: feature:113801-116362:-1:exon
subclass of: SO_0000010

position:113801:-1
position: 113801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116362:-1
position: 116362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113801-116362:-1:exon

DSHI_RS19620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: ctaD
locus tag: DSHI_RS19620
old locus tag: Dshi_3891
EC number: 7.1.1.9
inference: COORDINATES: protein motif:HMM:TIGR02891.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase subunit I
translation: MTDTFPQPRGAEPPSPQPAARKPAYDVAPKGEMGKDFEGIWEQPSGIRVLSAVSHRAVGKRFLITGFIFFLIAGVFALLVRLQLMVPENTFLSSETYNQLFTMHGTIMMFLFAIPMLEGFAVYLIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGLSADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVGKPLFGYGFAVAAVVTMSFLSFGLWAHHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFVLGGMTGVMVAAVPFNLQAHDSYFVVAHLHYVLIGGMVFPMFGALYYWVPHFTGRMMSERLGKWVFWLMFSGFNLAFFMMHLTGMRGMPRRVATYPGGIGWDRLNMLSTIGAFILAAGIALFIWDFFRHRRVGPRAGRNPWGASTLEWLYEPVTPGYNFRAIPRITSREPLWDQPELAETPGAEVRGALRDYPDHRRETLGCHIVTGEPLQILRLPHPTWFPLIAALGLALLFGATLASVYWLCAIGAGIALIGFAGWAWEPSDSGVDRDIGIEGLRLPVNAIDKQSHLHVGLVGTIMILFALFFSLLFAGLYLWNTQPIFAEATQRPARIFALLALGLSVVVFALSWMVGRAHARASLWMTGSLNILLAACLIGLTMCFGLALLPIDPWSTAFAAVGWAIGAYLTALISVALLWTVFNALRKAVGATKPGQGLPDMLLGSFGKATATMALITAIAFLFAGTPQ
SIO_010081: DSHI_RS19620
subclass of: SO_0000673
so part of: DSHI_RS19620
location: complement(113801..116362)
location: region:113801-116362:-1
so has part: feature:113801-116362:-1:exon

WP_012187277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113801-116362:-1:exon

DSHI_RS19625
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
gene: coxB
locus tag: DSHI_RS19625
old locus tag: Dshi_3892
so part of: sequence
location: complement(116359..117396)
location: region:116359-117396:-1
so has part: feature:116359-117396:-1:exon
subclass of: SO_0000010

position:116359:-1
position: 116359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117396:-1
position: 117396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116359-117396:-1:exon

DSHI_RS19625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
gene: coxB
locus tag: DSHI_RS19625
old locus tag: Dshi_3892
EC number: 7.1.1.9
inference: COORDINATES: protein motif:HMM:TIGR02866.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase subunit II
translation: MDEDLDILGGRSVRDIVGEAPDLDTSAEDAALESLGDRSALDIWNSQSALEPSGLGAAAAYDLTIGMVVGLGAVFVVVMAIAWFAWHSKRPAGHWWVWTGGVITPLIAISTVMVASTAALVATTRPAPDALVIEVTGYQFWWDVVYDPDGTPLRDANELILPEGRPVTLRLNSNDVIHSFWVPSISGKMDMIPGRTNTLTITATETGQFRGQCAEFCGLSHPKMAFEVTVLPPEAFDKWLATTRGAARDVARPAQAEGREVFLSAGCAACHEIRGVAEGGRLGPDLTRLGARASLGAGMWRMNQGNVAGWIADVQDMKPGAQMPSYNHLSGPDLRNLSAYLVSLQ
SIO_010081: DSHI_RS19625
subclass of: SO_0000673
so part of: DSHI_RS19625
location: complement(116359..117396)
location: region:116359-117396:-1
so has part: feature:116359-117396:-1:exon

WP_012187278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116359-117396:-1:exon

DSHI_RS19630
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19630
old locus tag: Dshi_3893
so part of: sequence
location: complement(117396..117833)
location: region:117396-117833:-1
so has part: feature:117396-117833:-1:exon
subclass of: SO_0000010

position:117833:-1
position: 117833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117396-117833:-1:exon

DSHI_RS19630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19630
old locus tag: Dshi_3893
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008973019.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: c-type cytochrome
translation: MAWSALRPENSPGHALATTTSAAFSDLAAWFRSGPADGQPDWEAAARNVYGADASHGAQLMILHGCGACHTIPGVTGADGSVGPDLGGLADRAYVGGVLPNEPGGLVRWLVNPTTYAPNTAMPDLGVTEAEARDMAAYLFTLRGE
SIO_010081: DSHI_RS19630
subclass of: SO_0000673
so part of: DSHI_RS19630
location: complement(117396..117833)
location: region:117396-117833:-1
so has part: feature:117396-117833:-1:exon

WP_044029474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117396-117833:-1:exon

DSHI_RS19635
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19635
old locus tag: Dshi_3894
so part of: sequence
location: complement(117901..118716)
location: region:117901-118716:-1
so has part: feature:117901-118716:-1:exon
subclass of: SO_0000010

position:117901:-1
position: 117901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118716:-1
position: 118716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117901-118716:-1:exon

DSHI_RS19635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19635
old locus tag: Dshi_3894
inference: COORDINATES: protein motif:HMM:NF012264.2
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: c-type cytochrome
translation: MPRLNSPFVITTAFAVVGIGVFALNAQDYETDPGIKALEARLEDDRVLFNVEVQREVTDDLLELGRLVAMGGAEAGGSGMACIACHGAEGMGDGSGAFPRIAGQSGWYLYKQLIDYASGARPNKVMSGVAQRLTEREMEAVSAHYAAIDAPFRPVIGDIEPELLQWGGQLGAVGSAERGIPACVNCHGPSGMGNPPSVPYLAGQYANYMTHQLELWAEGVRDNDAMNVMSSIAEKMSSEDMRAVSEYYARVRPAGAGAEVAVNVDMTVDTE
SIO_010081: DSHI_RS19635
subclass of: SO_0000673
so part of: DSHI_RS19635
location: complement(117901..118716)
location: region:117901-118716:-1
so has part: feature:117901-118716:-1:exon

WP_012187280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117901-118716:-1:exon

DSHI_RS19640
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19640
old locus tag: Dshi_3895
so part of: sequence
location: complement(118732..120516)
location: region:118732-120516:-1
so has part: feature:118732-120516:-1:exon
subclass of: SO_0000010

position:118732:-1
position: 118732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120516:-1
position: 120516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118732-120516:-1:exon

DSHI_RS19640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19640
old locus tag: Dshi_3895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008382400.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GMC family oxidoreductase
translation: MAERRLPKTDVVIVGGGWTGLTAAYELAHAGQRCVVLERGHHRHDATSFGSPEEHDELKYALRYGHMQDVKKETLTFRNSRDQRALPMRRLGSFLPGTGLGGAGIHWNGQIWRPLPSDLEMRSHYEDRYGSQFIPDELSIQDWGVTYDELEPHLDFFEKICGAAGAAGNLRGERQVGGNPFEGPRSDGYPNPAMKQPISNTKFGRAAERMGLNPFPMPSANVTQAYENPYGAQLHPCTYCGFCERFGCGYFAKADPIICVYDRIKDHENFEIRFDAQVLRVTKSQDGQTATGVIYLDEDGVEVFQPADTVCLNAYSLWNVHLMLVSGLGTPYDPETRQGTVGRNYSYQTIAAVDAFFDETVQTDPFMGAGALGIVVDDFNGDNFDHSDLGFVGGGYIACKQYHGRPISYQPVPEGTPPWGAEWKAAVRENYTRHADLVIHGSSVSTPENYLDLDPTWTDAYGRPLLRMTFNFPDTDRRMSDYVMNRAVEIAQEMDNVTSVSSVNLAAEGKNYSIVPYQTTHNVGGAVIGTDPETSVVNRYGQMWDHHNVFVFGACLFPQNLGYNPTGPLMGLAYWTLEHMKRDYLPNPRPLMDA
SIO_010081: DSHI_RS19640
subclass of: SO_0000673
so part of: DSHI_RS19640
location: complement(118732..120516)
location: region:118732-120516:-1
so has part: feature:118732-120516:-1:exon

WP_012187281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118732-120516:-1:exon

DSHI_RS19645
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19645
old locus tag: Dshi_3896
so part of: sequence
location: complement(120509..121231)
location: region:120509-121231:-1
so has part: feature:120509-121231:-1:exon
subclass of: SO_0000010

position:120509:-1
position: 120509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121231:-1
position: 121231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120509-121231:-1:exon

DSHI_RS19645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19645
old locus tag: Dshi_3896
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009824247.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gluconate 2-dehydrogenase subunit 3 family protein
translation: MTHIFSRRAILQSAGASGVAAAIGLTSAPRHAFAQADARPWAILTDTQARWLAAACDVFIPEDDYPSASQAGVVDFIDLQMATDYGQGAGLYLQGPFPAGTPEQGWQLDMTPAELLLGGIDAHIAEGPALFDLDETGRADAIRALSERTQPIGGGTPATDFFTLLHSLTNEGYFADPIYLGNYDYAGWRMVGFPGAHAYYTERVDDASISTPPPPMGIAHQPNGRSTPPRPIPQGGRADG
SIO_010081: DSHI_RS19645
subclass of: SO_0000673
so part of: DSHI_RS19645
location: complement(120509..121231)
location: region:120509-121231:-1
so has part: feature:120509-121231:-1:exon

WP_012187282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120509-121231:-1:exon

DSHI_RS19650
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19650
old locus tag: Dshi_3897
so part of: sequence
location: complement(121309..121788)
location: region:121309-121788:-1
so has part: feature:121309-121788:-1:exon
subclass of: SO_0000010

position:121309:-1
position: 121309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121788:-1
position: 121788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121309-121788:-1:exon

DSHI_RS19650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19650
old locus tag: Dshi_3897
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005848748.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MgtC/SapB family protein
translation: MTTLPWQVVLLRLAGALVLCGLIGLERETKSRPAGLRTHMLVGLAAALYCLIMLEVLANMDSYSDRVSSDPLRLVNAVTNGVAFLAAGMIVFSQGKVRGITTGTSLWLAAAIGLSVGFGFWMMAVATTLLALLVIRVLKLGEIRAAGGDSDHASDTETN
SIO_010081: DSHI_RS19650
subclass of: SO_0000673
so part of: DSHI_RS19650
location: complement(121309..121788)
location: region:121309-121788:-1
so has part: feature:121309-121788:-1:exon

WP_245533097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121309-121788:-1:exon

DSHI_RS19655
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19655
old locus tag: Dshi_3898
so part of: sequence
location: complement(121824..123404)
location: region:121824-123404:-1
so has part: feature:121824-123404:-1:exon
subclass of: SO_0000010

position:121824:-1
position: 121824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123404:-1
position: 123404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121824-123404:-1:exon

DSHI_RS19655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19655
old locus tag: Dshi_3898
inference: COORDINATES: protein motif:HMM:NF012356.2
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha-amylase family glycosyl hydrolase
translation: MPRRGPWPENPVIYQVYPRSFLDTTGTGEGDLPGVTRQLDYIAGLGVDGIWLSPFYPSPFCDGGYDIADHCAVDRRFGTLDDFDALVARAHDLDLRVMIDLVLNHTSDTHDWFAKSLAREEGFEDVYIWADPCKDGSPPSNWLSFFGEAAWRWHPQRAQYCLHKFLPCQPCLNHYNDRVHERLNRITRFWRDRGVDGFRYDAVTSFFYDPGFRDNPPAAEAEAALIPGPSNNPYTFQEHIHDVLPNECAAFAETLREMAGPDAYLLGEINNGPRSVEVTCKFTGPDRLDAGYAIDLPERGPSTEVLRDLLTRLEDAEGWTWWLNSHDQKRAVSSFGDGGAADAKMLAAFLCALPGPLLLFQGEELGQPQAELEKVELTDPYDLMYWPDSVGRNGARAPMAWDDTQPACGFSKAVPWLPMARAEQGGVAQQEADPASVLAFYRDALARRRDLGLAEATMELEDAPDACIRFRLRVGTLVVQVAANMSGAPQDLAPRQGAKRILQTKPPAPGSNLPPRSAAWWLLEKG
SIO_010081: DSHI_RS19655
subclass of: SO_0000673
so part of: DSHI_RS19655
location: complement(121824..123404)
location: region:121824-123404:-1
so has part: feature:121824-123404:-1:exon

WP_012187284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121824-123404:-1:exon

DSHI_RS19660
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19660
old locus tag: Dshi_3899
so part of: sequence
location: complement(123407..124261)
location: region:123407-124261:-1
so has part: feature:123407-124261:-1:exon
subclass of: SO_0000010

position:123407:-1
position: 123407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124261:-1
position: 124261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123407-124261:-1:exon

DSHI_RS19660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19660
old locus tag: Dshi_3899
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007426955.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MSKHTDIPAQSQDAMPAHEYKMDPPPDYMPRHPGVGKLEGKRAIITGGDSGIGRDVSVLFAREGAEVGIIYLDEDRDAKETVRLIENEGATGHAVQADIGDRAQAFDAVRELAEKMGGIDILVNNAAQQWLETELDDITEDHLRRTFDSNVMGYFFCTQAAADHLPEGGTIINTASVNAFKGNAALISYSSTRGAITAFSRSIASQLVSKGIRVNCVAPGPIWTPFIPGTMPAEKVEGFGSQVPMQRPGQPWEVATSYLFLASSDGSYFTGQTLHPNGGMIVGS
SIO_010081: DSHI_RS19660
subclass of: SO_0000673
so part of: DSHI_RS19660
location: complement(123407..124261)
location: region:123407-124261:-1
so has part: feature:123407-124261:-1:exon

WP_012187285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123407-124261:-1:exon

DSHI_RS19665
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19665
old locus tag: Dshi_3900
so part of: sequence
location: complement(124299..125282)
location: region:124299-125282:-1
so has part: feature:124299-125282:-1:exon
subclass of: SO_0000010

position:124299:-1
position: 124299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125282:-1
position: 125282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124299-125282:-1:exon

DSHI_RS19665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19665
old locus tag: Dshi_3900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007426954.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MTQSKIAVVAGGSAGVGRATVEKLIAEGYKVGVLARGEDRLAEMEETYGPQVMTLPCDVSDAAQVSRAATLIEEGLGPIDLWINCAMLTSFSPFTEMKDDEFRAIVDTTFMGVVNGTRAALAQMEPRGRGQIVTLGSGLGYRAVPFQSAYCASKHAINGFVASVRSELIRKNAGITMSLVQLPALNTPQFDWARNRLETKPQPAPPIYQPEVAADAVMRAVHKGSRELFVGASVLQLVFGNMLLPDYLDKKMSTSGAEMQKSDRDAQGTSDDNLHGPVDSIPASAHSSYGERAKASGLIVDADLARLAVFGGLIVGTAVLSRLLPRR
SIO_010081: DSHI_RS19665
subclass of: SO_0000673
so part of: DSHI_RS19665
location: complement(124299..125282)
location: region:124299-125282:-1
so has part: feature:124299-125282:-1:exon

WP_012187286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124299-125282:-1:exon

DSHI_RS19670
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19670
old locus tag: Dshi_3901
so part of: sequence
location: complement(125343..128468)
location: region:125343-128468:-1
so has part: feature:125343-128468:-1:exon
subclass of: SO_0000010

position:125343:-1
position: 125343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128468:-1
position: 128468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125343-128468:-1:exon

DSHI_RS19670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19670
old locus tag: Dshi_3901
inference: COORDINATES: protein motif:HMM:NF013069.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter permease subunit
translation: MARLIRWFLTNPVAANLAMVALVLAGLTAALNLTVRTFPEINTGVINVTVVYPGATPAEVADSILVPIEEQVTGLAGIRSIDATATRGRGTVTVQLTRAADPRTVKDDVDNAVARITTFPEAAESPRVTEVEPTEVAVELALFGTADRKTLKALAEIVRADLTGMDGISQVTVKGVAPDQIEIAVPRATLEAYAIGLTALADRIAGASIDLSGGEIDTGASTVQVRVSGEAQTADALRDTVVFTSDTGARVRLGQIATIRDGLTEDATLATIEGQPAVFLSVERTGTEQVLQITDAVTRYTEQTLPERLPQGVEATIWRNNGAQLQGRIDLLAKNGGIGAVLILIVLALFLDLRIAAWVAGGVAITFAGAFVLMQAFGVAISQLSLFGFILALGIVVDDAIVVGENTYSELEGEGDPDRAAERGILSVWRAILFSVSTTVLAFTPLLLLPGASGSFIGPVATVVIFVLLLSLFESFFILPRHLSNIRLTPPRRFSPRRVTDGLRRRVDRGFRRFTDGPLDRAVRFAICHPVVIVAGCLVSLILTVGLVQGGKVRFEFFPRIEGNFVTAELRMPDGTSEDATLQRALDIAGAARDAADTLGADVLERTGITIGFSTGGGPGQGGTSSGSTANISAQLADAATRDITAAAFTDAWREQVGEVAGARELLFSSSLVGVGAPIALKVAAEDDSARQAAVDRITQALRGREGVRDLRDDSASTAQELVITPRADAATFGISETAIARELRAAFYGVTIDQFARNREEVDIRLRLALEDRDAVADLRRLTIPGPEGDIPLERLVEIDQKPAATSITRADGRTVTTIMADVNTGLTTGGAETEWVLSQIVPDLRADFPGLEVTAGGEQEEAGRFSNSLTQNFGLALFGIYAVLALAFGSYLRPLIVLLVLPFGFVGAVLAHAALGMNLTLLSMFGIIGLSGVVVNGALLIVDFILAEEARGTDPNEAIRRATLRRFRPITLTTLTTFLGVTPLILETSVQAQFLIPTAVSLGFGILFSSVLLMLLVPAYASLFAAGRARMQTGTPQRT
SIO_010081: DSHI_RS19670
subclass of: SO_0000673
so part of: DSHI_RS19670
location: complement(125343..128468)
location: region:125343-128468:-1
so has part: feature:125343-128468:-1:exon

WP_012187287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125343-128468:-1:exon

DSHI_RS19675
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19675
old locus tag: Dshi_3902
so part of: sequence
location: complement(128472..129650)
location: region:128472-129650:-1
so has part: feature:128472-129650:-1:exon
subclass of: SO_0000010

position:128472:-1
position: 128472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129650:-1
position: 129650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128472-129650:-1:exon

DSHI_RS19675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19675
old locus tag: Dshi_3902
inference: COORDINATES: protein motif:HMM:TIGR01730.1
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: efflux RND transporter periplasmic adaptor subunit
translation: MTRSNPSKADHGRKWPWLVLVATLLLLAGGGYWWLSQPAERRSGGDATQSPLVRATTLEATDHVILHQTGFVRASDAVEVVPQITERIVEIAPSFDVGQRVVQGTLLIRLDARVAEANLRTAEARLAQAEAALEETRISLERQQKLHVEQVISEAALDDAQVAQSRAEADVAMAEAELARAEIALNDTQLRAPFDAIVTRENASLGQLVQAGNSIGQLVATDHAEVRMGLLPSDLSVLGQAAAARGLSVTVSDPATGRTLRTGKVGAIVPAIDTATRTVTLIVDIPDPFAEGESSVRIGELVELSLRVPLGAPPALRVAAEALKGGDTLWRISDGQLERRDVYVLSRTDSTVTLRGEALSQGDKVLLSDLAAPADGDTVRVAADAMQVARGD
SIO_010081: DSHI_RS19675
subclass of: SO_0000673
so part of: DSHI_RS19675
location: complement(128472..129650)
location: region:128472-129650:-1
so has part: feature:128472-129650:-1:exon

WP_012187288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128472-129650:-1:exon

DSHI_RS19680
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19680
old locus tag: Dshi_3903
so part of: sequence
location: complement(129663..130460)
location: region:129663-130460:-1
so has part: feature:129663-130460:-1:exon
subclass of: SO_0000010

position:129663:-1
position: 129663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130460:-1
position: 130460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129663-130460:-1:exon

DSHI_RS19680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19680
old locus tag: Dshi_3903
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014437566.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MEFGLKGKTALITGGASGIGRETAKFLRDEGANVILVDLKGDKVAEAAEALGDRAHALQADLSDTEQANGLVQTVEERFEMPDIVVCAAGVTGAKGHPLEMTDADWHEAWNTDFMSVVRTLRGFVPRMEKRGWGRVVMVASENAVQPYADEAVYNVAKAGLLNFAKALSRVTAPNGVLVNTVSPAFIETPMTDGMMDQRAEQMGTSRDEAVKTFLDEERPYLELKRRGKPEEVAATIAFLCSQQASFVVGANYRVDGGSVATMAV
SIO_010081: DSHI_RS19680
subclass of: SO_0000673
so part of: DSHI_RS19680
location: complement(129663..130460)
location: region:129663-130460:-1
so has part: feature:129663-130460:-1:exon

WP_012187289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129663-130460:-1:exon

DSHI_RS19685
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19685
old locus tag: Dshi_3904
so part of: sequence
location: complement(130573..132153)
location: region:130573-132153:-1
so has part: feature:130573-132153:-1:exon
subclass of: SO_0000010

position:130573:-1
position: 130573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132153:-1
position: 132153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130573-132153:-1:exon

DSHI_RS19685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19685
old locus tag: Dshi_3904
inference: COORDINATES: protein motif:HMM:TIGR00813.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter
translation: MEQQIDANLTMLDYGVIAVYLAIVIAIGVWVARKTRTGEDLFLAGRSLGWAAIGFSLFASNISTSTLVGLTGSAYTGGLTVSSYEWMAGIPLLFMAFIFAPVFLKSRISTTPEYLENRYSRRVRLYFSGLTIVFTVIVDTAGGLYAGAVVLKVFFPDLDIWMSCVAIGLFAGIYTATGGLRAVVYTDILQAVVLICGTGLTAFLMYQSVDFSWESVRSQVPEGHLSIVQPIDDDTLPWPGLFTGVWLLGFWYWVTNQYIVQRVLGAKDLSNAQWGAILGGILKILPTFFIILPGVMALVTLPDIQNSDQVFPIIITEVLPSGLTGLVMAGLIAAIMSTVDSTLNSSSTLLINDFLTRPEKEPDPETAKKWGMMATLGFMVIAIAWAPLIQYFGGLWAYIQQAFSVLVPPLVVCFTLGALWSRGTENAAFWTLIIGHTLGLVVFMLNQFGIWPLHYTISVTIMTAVSAAIFVALSLRDDTPDVREDALWQRADAFDTPATTAPVLKNVKTHAILLILLMIGTLVLFW
SIO_010081: DSHI_RS19685
subclass of: SO_0000673
so part of: DSHI_RS19685
location: complement(130573..132153)
location: region:130573-132153:-1
so has part: feature:130573-132153:-1:exon

WP_012187290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130573-132153:-1:exon

DSHI_RS19690
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19690
old locus tag: Dshi_3905
so part of: sequence
location: complement(132871..133992)
location: region:132871-133992:-1
so has part: feature:132871-133992:-1:exon
subclass of: SO_0000010

position:132871:-1
position: 132871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133992:-1
position: 133992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132871-133992:-1:exon

DSHI_RS19690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19690
old locus tag: Dshi_3905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007256757.1
GO function: GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mechanosensitive ion channel family protein
translation: MEEITSQIARWGDLIEGLPAFLAPAALLLAAVVAALQLHALAFALLSRFTKTNCGVVGSLAERARRPLRLAFILAALAITIPQIGLPYRWESRLGHLFLVLLIVLVGWTVIILTSHFSDRAIRRHRLDTDDNLQARKFVTQVRVLKRTANIVFGILTAGAVLLTFESVQRYGVSLFASAGAAGLILGFAARPVLANLIAGIQIAITQPIRLDDVVIVEGEWGWIEEIYATYVVVRIWDWRRMVVPLSYFIEKPFQNWTRENASIIGAVYWYMDYTVPIAEMRAKLEKTVENSPHWDGQVVNLQVTDTDKDTLHIRGLMSARTSPQAWDLRCEVREKLIAWLQAEYPEALPRLRGELEMRPERASGSLEQADAA
SIO_010081: DSHI_RS19690
subclass of: SO_0000673
so part of: DSHI_RS19690
location: complement(132871..133992)
location: region:132871-133992:-1
so has part: feature:132871-133992:-1:exon

WP_012187291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132871-133992:-1:exon

DSHI_RS19695
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19695
old locus tag: Dshi_3906
so part of: sequence
location: complement(133997..135598)
location: region:133997-135598:-1
so has part: feature:133997-135598:-1:exon
subclass of: SO_0000010

position:133997:-1
position: 133997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135598:-1
position: 135598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133997-135598:-1:exon

DSHI_RS19695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19695
old locus tag: Dshi_3906
inference: COORDINATES: protein motif:HMM:TIGR00813.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:solute symporter
translation: MGDAKFDLHWIDYAIVVIYFIGVIAHGVYVSRKNEEGADGYFLAGRSLPWYLIGFSLFASNMSGSSFVGLMGGAYANGIVIFNYEWTAALVLILFAIFVLPSFLKAKISTVPEFLEQRYDVRSRRAFSIFTILAILFIDTAGALYAGGLVISNVTGYLNLWTAVAVLALVAGIYTILGGLSAVVVTDTVQAILLIIGAAILFWLGLDEIGGWEQLFVDIPEGHDQLILPADDDFLPWTGLWGVVLLGFYYWTINQFVVQRTLGAKNLKEGQIGALFAGFLKLPNIFLMIIPGVIALKLYPELETPDLAFPTLAFELMPIGVRGLIMAALIAAIMSSLDSAMNSASTLVVKDFVEPIWEVDEGKQVWIGRLVTGAVMVFGAIYAPSIAGFESLFSYFQSSLSYIIPTIVVVYIVGLFVPWLNGNGAFWTIILGLVVGIPLFIMKEVTGVWAGMGLPEIHYTIMSTLMMCLGLATHFGISALTRKADKENIEDLVWSAADTKAIFTQWEEPLWQDRTIWAGLLILSTIGFVAWFW
SIO_010081: DSHI_RS19695
subclass of: SO_0000673
so part of: DSHI_RS19695
location: complement(133997..135598)
location: region:133997-135598:-1
so has part: feature:133997-135598:-1:exon

WP_012187292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133997-135598:-1:exon

DSHI_RS19700
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19700
old locus tag: Dshi_3907
so part of: sequence
location: complement(135680..136705)
location: region:135680-136705:-1
so has part: feature:135680-136705:-1:exon
subclass of: SO_0000010

position:135680:-1
position: 135680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136705:-1
position: 136705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135680-136705:-1:exon

DSHI_RS19700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19700
old locus tag: Dshi_3907
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008332312.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation transporter
translation: MFASLSSPVLLGIGLVATVVILVSGLRMTGLADRIADRTGLGEALIGGVLLGAATSVSGTVVSLTSALSGNASLAFSNGIGGIAAQTAFLAIADMLYRRANLEHAAAELANMFQCGILLLLLSVPFVAYSAPSVTIFAIHPASILLVVIYAIGVIATARLRKQPMWEPVDTSDTRPDTPEDEDDRSQPARGLILQFVLLMLIMGSAGWCIAQLAQVLITRYELSSSMVGALMTAVVTSFPELVTTLAAVRRGALQLAVGGIIGGNTFDILFLTLSDIGFRDGSVYHAIGRDDLLWLGVAAMMTAVLLLGLLYRERRGPGRIGAESATMLAIYAGGIAVQAF
SIO_010081: DSHI_RS19700
subclass of: SO_0000673
so part of: DSHI_RS19700
location: complement(135680..136705)
location: region:135680-136705:-1
so has part: feature:135680-136705:-1:exon

WP_012187293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135680-136705:-1:exon

DSHI_RS19705
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19705
old locus tag: Dshi_3908
so part of: sequence
location: 136970..138121
location: region:136970-138121:1
so has part: feature:136970-138121:1:exon
subclass of: SO_0000010

position:136970:1
position: 136970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138121:1
position: 138121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136970-138121:1:exon

DSHI_RS19705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19705
old locus tag: Dshi_3908
inference: COORDINATES: protein motif:HMM:NF013740.2
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AI-2E family transporter
translation: MDQVAQSKQTNVSGAGRAAMGRRNYALGLVAALLVIAMFAALRAMAPIAIPVVIAVFVALAVLPMDRAVAERLPKPLSWLGRAFVMVFLLSILATFIVGLSYCVTQIATQLPDVSERLSNVLLERASSGQGNTDVWTAALTQLRNMLDDQGAALADMAFNWASGVAQGVASSTGALLAGLFLVLFLVLLALSEADNWAAKLDNILTDRDRPWRQVTTRLGQALRRFLATRAVMGLITAVAYTLWFLPFDLDLLLVWGILTFLMNFIPNLGSIVSGVLPSIYAFLTLDPGTALLLAAGLVLIEQVIGNWLDPRVQGNSVAVSPLVILVAVLFWGWFWGIAGAFLATPITLAIMIFCNYVRALRPLALLLSNQRRAADLDDALSG
SIO_010081: DSHI_RS19705
subclass of: SO_0000673
so part of: DSHI_RS19705
location: 136970..138121
location: region:136970-138121:1
so has part: feature:136970-138121:1:exon

WP_012187294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136970-138121:1:exon

DSHI_RS19710
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19710
old locus tag: Dshi_3909
so part of: sequence
location: complement(138124..138396)
location: region:138124-138396:-1
so has part: feature:138124-138396:-1:exon
subclass of: SO_0000010

position:138124:-1
position: 138124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138396:-1
position: 138396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138124-138396:-1:exon

DSHI_RS19710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19710
old locus tag: Dshi_3909
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011370480.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YrhK family protein
translation: MRAHQFLRIFVHQYEWVHLGVGMIGNALFLIGSILFLPDWAETQTGMLGEKVKWRTVGVWFFIAGATLMLIGSVGEVLVSLRSKRKARKS
SIO_010081: DSHI_RS19710
subclass of: SO_0000673
so part of: DSHI_RS19710
location: complement(138124..138396)
location: region:138124-138396:-1
so has part: feature:138124-138396:-1:exon

WP_012187295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138124-138396:-1:exon

DSHI_RS19715
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19715
old locus tag: Dshi_3910
so part of: sequence
location: complement(138528..138908)
location: region:138528-138908:-1
so has part: feature:138528-138908:-1:exon
subclass of: SO_0000010

position:138528:-1
position: 138528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138908:-1
position: 138908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138528-138908:-1:exon

DSHI_RS19715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19715
old locus tag: Dshi_3910
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKQDPKWTPDVETPPTTFPRTREELVEANRQRRKQEPAAAAQETDSESGAPAAVPLTPRTEPARTHAVNVTEDPSDVRAGPGDAGAADTPTKRPQVAREYNDSWRKAFKWIAALVVLGIILALIF
SIO_010081: DSHI_RS19715
subclass of: SO_0000673
so part of: DSHI_RS19715
location: complement(138528..138908)
location: region:138528-138908:-1
so has part: feature:138528-138908:-1:exon

WP_012187296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138528-138908:-1:exon

DSHI_RS19720
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19720
old locus tag: Dshi_3911
so part of: sequence
location: 139092..140549
location: region:139092-140549:1
so has part: feature:139092-140549:1:exon
subclass of: SO_0000010

position:139092:1
position: 139092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140549:1
position: 140549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139092-140549:1:exon

DSHI_RS19720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19720
old locus tag: Dshi_3911
EC number: 3.4.21.107
inference: COORDINATES: protein motif:HMM:TIGR02037.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Do family serine endopeptidase
translation: MYCLPALPRALAVLALLPAGGSALPAIAQQTDFDSPTDFSEMVTERLPAVVGILSTGPAPDPSPAIQPQLPPGMREFFGGPTPPTPQGPMRTQGSGFIISQDGLVVTNNHVIAGAEQIEVIMNDDRRLDAELIGTDPATDIALLRIENVTDLPHVVWGSSDDLSIGEWVVAIGNPFGLGGTVTAGIVSARARDINAGPYDSFIQTDAAINSGNSGGPLFDVSGDVVGVNTAIFSPTGGNVGIGFAVPSAVAERIVDDLQDDGRVERGWLGVQVQPVDEALARAFKFEDPQGVLLADVTKGSPAFEAGLEPGDVLLEIDGAAVDTPRDLTFAVADTPVGATVMVTYLRNGNRVQAEVTIGQRPDLQSATAQPDAGGRDDRSDADGPRIGVSVAPLSGELRAQAGIPNEVSGLLVQSVTQGSPAAEAGLRAGDVLVEAADVTLGQVETLRDAIARAAEEGETLLIRVFRGQGYNFVVVNLSEEVVSK
SIO_010081: DSHI_RS19720
subclass of: SO_0000673
so part of: DSHI_RS19720
location: 139092..140549
location: region:139092-140549:1
so has part: feature:139092-140549:1:exon

WP_012187297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139092-140549:1:exon

DSHI_RS19725
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
alternative label: pexB
gene: dps
locus tag: DSHI_RS19725
old locus tag: Dshi_3912
gene synonym: pexB
so part of: sequence
location: complement(140779..141261)
location: region:140779-141261:-1
so has part: feature:140779-141261:-1:exon
subclass of: SO_0000010

position:140779:-1
position: 140779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141261:-1
position: 141261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140779-141261:-1:exon

DSHI_RS19725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
alternative label: pexB
gene: dps
locus tag: DSHI_RS19725
old locus tag: Dshi_3912
gene synonym: pexB
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018304646.1
GO function: GO:0016722 - oxidoreductase activity, acting on metal ions [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA starvation/stationary phase protection protein Dps
translation: MPTNFADGLNQDTRAQVVDLLNENLVNVINLTLAVKQAHWNLKGRGFIGVHELLDDVADRLRDGADTMAERAVILGGYAKGTAEVVAEQSTLEAYPLELSEISEHIEHLKARFMEVGKAIRAAAEVAEEAGDEDTADLFTEISRGVDKDAWFIGANAEGA
SIO_010081: DSHI_RS19725
subclass of: SO_0000673
so part of: DSHI_RS19725
location: complement(140779..141261)
location: region:140779-141261:-1
so has part: feature:140779-141261:-1:exon

WP_012187298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140779-141261:-1:exon

DSHI_RS19730
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19730
old locus tag: Dshi_3913
so part of: sequence
location: complement(141452..142111)
location: region:141452-142111:-1
so has part: feature:141452-142111:-1:exon
subclass of: SO_0000010

position:141452:-1
position: 141452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142111:-1
position: 142111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141452-142111:-1:exon

DSHI_RS19730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19730
old locus tag: Dshi_3913
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011568647.1
GO process: GO:0006813 - potassium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-binding protein
translation: MRIIILGASRFGRAIAEQLIDAEHEVIVIDKSRDRLERLADQLDCGMLEGDGTMPTTLREVFRDENDVFVAVTNASEDNILAALVARSVGYGRVIPQIVSSELMKVCTELELNDAINPHATVAADVAEAMQDRAEIDHDTSLSNQLAIKCVHVPACLDGRPLQKLDLPENCQAVALIRDADESFVEDDTELAEDDQVLFVLERDKIDALADVFRTSDSD
SIO_010081: DSHI_RS19730
subclass of: SO_0000673
so part of: DSHI_RS19730
location: complement(141452..142111)
location: region:141452-142111:-1
so has part: feature:141452-142111:-1:exon

WP_012187299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141452-142111:-1:exon

DSHI_RS19735
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19735
old locus tag: Dshi_3914
so part of: sequence
location: complement(142116..143510)
location: region:142116-143510:-1
so has part: feature:142116-143510:-1:exon
subclass of: SO_0000010

position:142116:-1
position: 142116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143510:-1
position: 143510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142116-143510:-1:exon

DSHI_RS19735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19735
old locus tag: Dshi_3914
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011568648.1
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: potassium transporter TrkG
translation: MLAKHAPVFVILCAPPAIWAVAEGQAILALALAIPATFAALVFLAVARRPLPDDLRGVEAIVTIALVFGMSAVFVTPAFMALGMPVVDALFEAVSGATTTGLSVAFNPDAWPFAGHFLRAWVQWCGGLVMATAVLAMLLPSGLPARKLGQAGIDQGDRIASTRKQARQLLTAYAALTGIMTLATMATIPDWREALAVTLSAVSTAGFAPRSDSLASYAPLAQGMVMLSCVLGAVSLLSFVLLSQGKWRQAWRLGSLRRVGLTVILFVAALIAFLVAAGERDAGAIYSSALNLISGLTTAGFSTGPISDLGPVLLLIVVAMVLGGDVGSTAGGLKLARVAVIVGAILHAGQRLRLPRNAVAPLRQNGEPVAPETLVSILGLLGIYLGALMLLWLHILAHGHDALGALFEATSTLSTVGLSTGITGPSMSVDLKLSMTFAMWLGRVEFFAVLLLLAPRTWRGTTGG
SIO_010081: DSHI_RS19735
subclass of: SO_0000673
so part of: DSHI_RS19735
location: complement(142116..143510)
location: region:142116-143510:-1
so has part: feature:142116-143510:-1:exon

WP_245533098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142116-143510:-1:exon

DSHI_RS21980
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21980
old locus tag: Dshi_3915
so part of: sequence
location: 143779..143946
location: region:143779-143946:1
so has part: feature:143779-143946:1:exon
subclass of: SO_0000010

position:143779:1
position: 143779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143946:1
position: 143946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143779-143946:1:exon

DSHI_RS21980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21980
old locus tag: Dshi_3915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020040189.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqaE/Pmp3 family membrane protein
translation: MDILRIIVAVILPPLGVFLEVGLGKHFWINILLTILGYIPGIVHAVYIIARRQPA
SIO_010081: DSHI_RS21980
subclass of: SO_0000673
so part of: DSHI_RS21980
location: 143779..143946
location: region:143779-143946:1
so has part: feature:143779-143946:1:exon

WP_012187301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143779-143946:1:exon

DSHI_RS19745
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19745
old locus tag: Dshi_3916
so part of: sequence
location: 143909..144319
location: region:143909-144319:1
so has part: feature:143909-144319:1:exon
subclass of: SO_0000010

position:143909:1
position: 143909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144319:1
position: 144319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143909-144319:1:exon

DSHI_RS19745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19745
old locus tag: Dshi_3916
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011455327.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4112 domain-containing protein
translation: MPSTSSPVANRRDRAAQFARLDRIANIFDSRFRIAGIRFGWDSILGLVPGIGDLVTAAPGVYIIGQSARMGVRRRVLARMAVNTGTDMIIGGIPLVGDIFDVGFKANQRNVRLLKKELDRDGTFDTCATMTQAQSS
SIO_010081: DSHI_RS19745
subclass of: SO_0000673
so part of: DSHI_RS19745
location: 143909..144319
location: region:143909-144319:1
so has part: feature:143909-144319:1:exon

WP_012187302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143909-144319:1:exon

DSHI_RS19750
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19750
old locus tag: Dshi_3917
so part of: sequence
location: 144427..144894
location: region:144427-144894:1
so has part: feature:144427-144894:1:exon
subclass of: SO_0000010

position:144427:1
position: 144427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144894:1
position: 144894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144427-144894:1:exon

DSHI_RS19750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19750
old locus tag: Dshi_3917
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007120166.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: host attachment family protein
translation: MQRISGLPENAFVVVADGEKALFLRNVGDNQDMNLVVARKIEQSNPAARDWATDKPGRFNDGAGVQRSAVDETDWHQLEKERFARDLADKLYKLAHQGQFDHVVIVASRVVLSALRKELHEEVLDRIILDIPKILTNHPLDEIETHLSRALADAA
SIO_010081: DSHI_RS19750
subclass of: SO_0000673
so part of: DSHI_RS19750
location: 144427..144894
location: region:144427-144894:1
so has part: feature:144427-144894:1:exon

WP_012187303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144427-144894:1:exon

DSHI_RS19755
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19755
old locus tag: Dshi_3918
so part of: sequence
location: complement(145009..145482)
location: region:145009-145482:-1
so has part: feature:145009-145482:-1:exon
subclass of: SO_0000010

position:145009:-1
position: 145009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145482:-1
position: 145482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145009-145482:-1:exon

DSHI_RS19755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19755
old locus tag: Dshi_3918
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007120710.1
GO function: GO:0042314 - bacteriochlorophyll binding [Evidence IEA]
GO process: GO:0019684 - photosynthesis, light reaction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PRC-barrel domain-containing protein
translation: MKLLTTSTIALLVTTPMAFADTHNTGEMAIMKSADMYENRAELIRSRDITGGAIYTMNAADDEFDMDDWDANTMYDAVDSEWNEIGEIEDLVLSKDGKVIGIVAEVGGFLDVGDQHVMISVSDMNLVAVDDTTYTYVTRLSEEELEAMEGVDEGFWN
SIO_010081: DSHI_RS19755
subclass of: SO_0000673
so part of: DSHI_RS19755
location: complement(145009..145482)
location: region:145009-145482:-1
so has part: feature:145009-145482:-1:exon

WP_012187304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145009-145482:-1:exon

DSHI_RS21985
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS21985
pseudo: true
so part of: sequence
location: 145798..146945
location: region:145798-146945:1
so has part: feature:145798-146945:1:exon
subclass of: SO_0000010

position:145798:1
position: 145798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146945:1
position: 146945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145798-146945:1:exon

DSHI_RS21985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS21985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611345.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: DSHI_RS21985
subclass of: SO_0000673
so part of: DSHI_RS21985
location: 145798..146945
location: region:145798-146945:1
so has part: feature:145798-146945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145798-146945:1:exon

DSHI_RS19765
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19765
old locus tag: Dshi_3922
so part of: sequence
location: 147270..148109
location: region:147270-148109:1
so has part: feature:147270-148109:1:exon
subclass of: SO_0000010

position:147270:1
position: 147270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148109:1
position: 148109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147270-148109:1:exon

DSHI_RS19765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19765
old locus tag: Dshi_3922
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011568649.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015499 - formate transmembrane transporter activity [Evidence IEA]
GO process: GO:0015724 - formate transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: formate/nitrite transporter family protein
translation: MSDRTDLAEAAIETEDEQRTVERATAMPSRLVFETIRQSGDEELRRPAMALAFSGVAAGLLIAFSVLGEALLRANLPDAPWRYILENFGYSLGFLLVILGRMQLFTENTITTVVPVLITPTAEMFGKVASLWGIVLLANVVGAFAAGAFLLGAPVLSPEVAEAVMELSRHATGMGAVEGFARGIPAGVLIAALVWMLPVARGNELALIVLFTWLIALGDFTHIIAGSVEMAYVLLAGELGLGQALLGFFVPVLAGNVVGGTVVFTMLAWAQTRAEISED
SIO_010081: DSHI_RS19765
subclass of: SO_0000673
so part of: DSHI_RS19765
location: 147270..148109
location: region:147270-148109:1
so has part: feature:147270-148109:1:exon

WP_012187308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147270-148109:1:exon

DSHI_RS22650
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS22650
old locus tag: Dshi_3923
so part of: sequence
location: complement(148170..148334)
location: region:148170-148334:-1
so has part: feature:148170-148334:-1:exon
subclass of: SO_0000010

position:148170:-1
position: 148170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148334:-1
position: 148334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148170-148334:-1:exon

DSHI_RS22650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS22650
old locus tag: Dshi_3923
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011568653.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEMTQLLVILFLFTILAVMGFAAFSKYRTEQRMDDPNAPKSSLAADGSDHRKAD
SIO_010081: DSHI_RS22650
subclass of: SO_0000673
so part of: DSHI_RS22650
location: complement(148170..148334)
location: region:148170-148334:-1
so has part: feature:148170-148334:-1:exon

WP_012187309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148170-148334:-1:exon

DSHI_RS19770
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19770
old locus tag: Dshi_3924
so part of: sequence
location: complement(148360..148554)
location: region:148360-148554:-1
so has part: feature:148360-148554:-1:exon
subclass of: SO_0000010

position:148360:-1
position: 148360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148554:-1
position: 148554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148360-148554:-1:exon

DSHI_RS19770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19770
old locus tag: Dshi_3924
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAPDTNLKTQRKRHIGALAGIGIAVAFAAILLAGYLVILADRGEAPEGADTQIDGRFGVEVEN
SIO_010081: DSHI_RS19770
subclass of: SO_0000673
so part of: DSHI_RS19770
location: complement(148360..148554)
location: region:148360-148554:-1
so has part: feature:148360-148554:-1:exon

WP_012187310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148360-148554:-1:exon

DSHI_RS19775
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19775
old locus tag: Dshi_3925
so part of: sequence
location: complement(148620..149342)
location: region:148620-149342:-1
so has part: feature:148620-149342:-1:exon
subclass of: SO_0000010

position:148620:-1
position: 148620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149342:-1
position: 149342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148620-149342:-1:exon

DSHI_RS19775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19775
old locus tag: Dshi_3925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005858321.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
translation: MTRPLIGVTTSSRSGWRVFPFINLNLWLTGGRGLRWGAGRPADLDKVDGIVIGGGDDISPELYGTEVLTTARLDPARDALEHGLAREALIRNIPVLGICRGAQMLNVAAGGSLHQNAWQVHPTSRPVKTVLPKRMVEVQANARLALIAGTEPMRVNALHSQAVDRLGDGFRVAARDTGGMVQAIERVEDPFALGVQWHPEYLVYARRQRAIFRALVTAARARAQHRLQTPDVTRDALTAG
SIO_010081: DSHI_RS19775
subclass of: SO_0000673
so part of: DSHI_RS19775
location: complement(148620..149342)
location: region:148620-149342:-1
so has part: feature:148620-149342:-1:exon

WP_012187311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148620-149342:-1:exon

DSHI_RS19780
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19780
old locus tag: Dshi_3926
so part of: sequence
location: complement(149344..150306)
location: region:149344-150306:-1
so has part: feature:149344-150306:-1:exon
subclass of: SO_0000010

position:149344:-1
position: 149344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150306:-1
position: 150306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149344-150306:-1:exon

DSHI_RS19780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19780
old locus tag: Dshi_3926
inference: COORDINATES: protein motif:HMM:NF023645.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidoligase family protein
translation: MSQFPPLPQTTTTDGEIRKIGVEIEFAGLREADVAELIRTHLGGRITSESRHRVTVEDTRLGRLKVELDTPLAKYAGDGLLETGLDLARPVIPIELITNPLPPDALPLLDAFCDTLRQAGGEGTGHGALQGFGVHLNIAVVAPEAALTTRSIRAFALLEPWLRHTMPPDTTRRLLPFVAPWPEALVDALVAAPYAGLDAQREIYKTHVKSRNHGLDLLPLFKAADPEAYARDFPGLTEIDGRPAFHFRLPDCRLDNPDWSLSEAWAQWHTVETVAADDALLTALGEAWEAHRARLLASSRAWADTVDTLLPTPLNALQGA
SIO_010081: DSHI_RS19780
subclass of: SO_0000673
so part of: DSHI_RS19780
location: complement(149344..150306)
location: region:149344-150306:-1
so has part: feature:149344-150306:-1:exon

WP_012187312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149344-150306:-1:exon

DSHI_RS19785
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19785
old locus tag: Dshi_3927
so part of: sequence
location: complement(150369..150764)
location: region:150369-150764:-1
so has part: feature:150369-150764:-1:exon
subclass of: SO_0000010

position:150369:-1
position: 150369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150764:-1
position: 150764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150369-150764:-1:exon

DSHI_RS19785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19785
old locus tag: Dshi_3927
EC number: 4.1.2.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015421741.1
GO function: GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO process: GO:0046656 - folic acid biosynthetic process [Evidence IEA]; GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydroneopterin aldolase
translation: MACLATVELTALEIAPEIGTYGPGDVVPDTHILDLSLAIDPALVLIDTDDMGRVFDYDPLVAEIDRLARDGHYATQERLITRITAACAAEPAIRSLDIHLRKRPVLDGTGTLGIRLQVDAATLDRFRTDAN
SIO_010081: DSHI_RS19785
subclass of: SO_0000673
so part of: DSHI_RS19785
location: complement(150369..150764)
location: region:150369-150764:-1
so has part: feature:150369-150764:-1:exon

WP_012187313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150369-150764:-1:exon

DSHI_RS19790
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19790
old locus tag: Dshi_3928
so part of: sequence
location: 150931..151857
location: region:150931-151857:1
so has part: feature:150931-151857:1:exon
subclass of: SO_0000010

position:150931:1
position: 150931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151857:1
position: 151857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150931-151857:1:exon

DSHI_RS19790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19790
old locus tag: Dshi_3928
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020675052.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: homocysteine S-methyltransferase family protein
translation: MDITLLDGGLGQELVRRAGRATPLWSMEALLNAPDLVRAVHDDFFAAGAEVATTNTYAVLPDRLAAFDMADQLAPLTERACGIAAAARDAAGGGLVAGALGPLGFSYQPDKAPPPEQAAEIYAEVARLQARIVDVLVLETMSSVDQARGGMMGAQVAGKPVWLALSVDDADGTKLRSGEPLAAISPVLETFSPDRVLINCARPEAVSQAMPILAGLHPRIGGYANGFTRIESGFNRIGATVDLLQARQDIGPAAYAAFAQAWVAAGATTVGGCCEIGPAHIEELARVLKTPVKETIPAGLSAREVAPD
SIO_010081: DSHI_RS19790
subclass of: SO_0000673
so part of: DSHI_RS19790
location: 150931..151857
location: region:150931-151857:1
so has part: feature:150931-151857:1:exon

WP_012187314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150931-151857:1:exon

DSHI_RS19795
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19795
old locus tag: Dshi_3929
so part of: sequence
location: 151908..152129
location: region:151908-152129:1
so has part: feature:151908-152129:1:exon
subclass of: SO_0000010

position:151908:1
position: 151908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152129:1
position: 152129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151908-152129:1:exon

DSHI_RS19795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19795
old locus tag: Dshi_3929
inference: COORDINATES: protein motif:HMM:NF022577.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2892 domain-containing protein
translation: MTMYEERLGRIGAWDRALRVALSFVLLGFALFCPFARDLGPVAVWGSGVVGAVVLATALLGWCPIYHLLGRGR
SIO_010081: DSHI_RS19795
subclass of: SO_0000673
so part of: DSHI_RS19795
location: 151908..152129
location: region:151908-152129:1
so has part: feature:151908-152129:1:exon

WP_012187315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151908-152129:1:exon

DSHI_RS19800
type: Gene
subclass of: SO_0000704
RO_0002162: 398580
locus tag: DSHI_RS19800
old locus tag: Dshi_3930
so part of: sequence
location: complement(152139..152846)
location: region:152139-152846:-1
so has part: feature:152139-152846:-1:exon
subclass of: SO_0000010

position:152139:-1
position: 152139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152846:-1
position: 152846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152139-152846:-1:exon

DSHI_RS19800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 398580
locus tag: DSHI_RS19800
old locus tag: Dshi_3930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009502778.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MDDLRVHDAAPDRAETTQNPVFEGVERAIHEQRLPPGTRLAEAELTEIYGVSRTIVRAGLQALSHAHLVTIRPNRGARVAQPTPEDAREVFEARELIEPRTAYEAARKATVADIAHLRRHSAEEQEALAARQHGRALRLGGAFHVEIARISGQRTLEGFVEELVARSALIISLYWARERVRCDTQCHSRLIDAISRHDADEAESLMRSHLLDIHSALDFGDDSADDTDLRGMLLG
SIO_010081: DSHI_RS19800
subclass of: SO_0000673
so part of: DSHI_RS19800
location: complement(152139..152846)
location: region:152139-152846:-1
so has part: feature:152139-152846:-1:exon

WP_203426356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152139-152846:-1:exon