Bombus pyrosoma isolate SC7728 linkage group LG18, ASM1482585v1, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Apidae; Bombus; Melanobombus.
Genus-wide characterization of bumblebee genomes provides insights into their evolution and variation in ecological and behavioral traits
Publication Status: Available-Online prior to print
REFSEQ INFORMATION: The reference sequence is identical to\nCM026142.1.\nAssembly name: ASM1482585v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Chinese Academy of\nAgricultural Sciences on 2020/10/02. The original whole-genome\nshotgun project has the accession JACXIN000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Chinese Academy of Agricultural Sciences\nAssembly Date :: DEC-2017\nAssembly Method :: DISCOVAR de novo v. 52488\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Bombus pyrosoma Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
COORDINATES: polyA evidence [ECO:0006239]
uncharacterized LOC122577264, transcript variant X1
uncharacterized LOC122577264, transcript variant X5
uncharacterized LOC122577264, transcript variant X3
uncharacterized LOC122577264, transcript variant X2
uncharacterized LOC122577264, transcript variant X4
uncharacterized LOC122577264, transcript variant X7
uncharacterized LOC122577264, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
cystinosin homolog, transcript variant X4
cystinosin homolog, transcript variant X9
cystinosin homolog, transcript variant X3
cystinosin homolog, transcript variant X8
cystinosin homolog, transcript variant X1
cystinosin homolog, transcript variant X2
cystinosin homolog, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
cystinosin homolog, transcript variant X6
cystinosin homolog, transcript variant X10
cystinosin homolog, transcript variant X7
39S ribosomal protein L55, mitochondrial
uncharacterized LOC122577263, transcript variant X2
uncharacterized LOC122577263, transcript variant X1
uncharacterized LOC122577263, transcript variant X5
uncharacterized LOC122577263, transcript variant X3
uncharacterized LOC122577263, transcript variant X4
uncharacterized protein LOC122577263 isoform X1
uncharacterized LOC122577263, transcript variant X6
uncharacterized LOC122577263, transcript variant X7
uncharacterized protein LOC122577263 isoform X2
uncharacterized LOC122577262, transcript variant X1
uncharacterized LOC122577262, transcript variant X2
uncharacterized LOC122577262, transcript variant X3
guanine nucleotide-binding protein-like 3 homolog
arylalkylamine N-acetyltransferase-like 2
cardioacceleratory peptide receptor, transcript variant X2
cardioacceleratory peptide receptor, transcript variant X5
cardioacceleratory peptide receptor, transcript variant X3
cardioacceleratory peptide receptor, transcript variant X4
cardioacceleratory peptide receptor, transcript variant X1
cardioacceleratory peptide receptor, transcript variant X6
cardioacceleratory peptide receptor, transcript variant X7
cardioacceleratory peptide receptor isoform X1
cardioacceleratory peptide receptor isoform X2
cardioacceleratory peptide receptor isoform X3
uncharacterized LOC122577195, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC122577195, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized protein LOC122577195 isoform X1
uncharacterized protein LOC122577195 isoform X2
leucine-rich repeat-containing protein 40-like
thioredoxin domain-containing protein 5 homolog
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
homeobox protein abdominal-B-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
homeobox protein abdominal-B-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
homeobox protein abdominal-B-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
homeobox protein abdominal-B-like isoform X1
homeobox protein abdominal-B-like isoform X2
homeobox protein abdominal-B-like isoform X3
uncharacterized LOC122577219, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC122577219, transcript variant X2
homeobox protein abdominal-A homolog, transcript variant X1
homeobox protein abdominal-A homolog, transcript variant X2
homeobox protein abdominal-A homolog isoform X1
homeobox protein abdominal-A homolog isoform X2
uncharacterized LOC122577201, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC122577201, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC122577199, transcript variant X9
uncharacterized LOC122577199, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC122577199, transcript variant X2
uncharacterized LOC122577199, transcript variant X5
uncharacterized LOC122577199, transcript variant X8
uncharacterized LOC122577199, transcript variant X7
uncharacterized LOC122577199, transcript variant X10
uncharacterized LOC122577199, transcript variant X11
uncharacterized LOC122577199, transcript variant X3
uncharacterized LOC122577199, transcript variant X6
uncharacterized LOC122577199, transcript variant X4
homeotic protein ultrabithorax, transcript variant X1
homeotic protein ultrabithorax, transcript variant X2
homeotic protein ultrabithorax, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
homeotic protein ultrabithorax isoform X1
homeotic protein ultrabithorax isoform X2
homeotic protein ultrabithorax isoform X3
homeotic protein antennapedia-like, transcript variant X7
homeotic protein antennapedia-like, transcript variant X6
homeotic protein antennapedia-like, transcript variant X9
homeotic protein antennapedia-like, transcript variant X4
homeotic protein antennapedia-like, transcript variant X3
homeotic protein antennapedia-like, transcript variant X8
homeotic protein antennapedia-like, transcript variant X5
homeotic protein antennapedia-like, transcript variant X10
homeotic protein antennapedia-like, transcript variant X1
homeotic protein antennapedia-like, transcript variant X12
homeotic protein antennapedia-like, transcript variant X11
homeotic protein antennapedia-like, transcript variant X13
homeotic protein antennapedia-like, transcript variant X14
homeotic protein antennapedia-like, transcript variant X2
uncharacterized LOC122577275, transcript variant X2
uncharacterized LOC122577275, transcript variant X1
uncharacterized LOC122577276, transcript variant X2
uncharacterized LOC122577276, transcript variant X1
uncharacterized LOC122577371, transcript variant X5
uncharacterized LOC122577371, transcript variant X1
uncharacterized LOC122577371, transcript variant X3
uncharacterized LOC122577371, transcript variant X4
uncharacterized LOC122577371, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC122577215, transcript variant X1
uncharacterized LOC122577215, transcript variant X2
uncharacterized protein LOC122577215 isoform X1
uncharacterized LOC122577215, transcript variant X3
uncharacterized protein LOC122577215 isoform X2
uncharacterized LOC122577215, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
uncharacterized protein LOC122577215 isoform X3
uncharacterized LOC122577215, transcript variant X7
uncharacterized LOC122577215, transcript variant X6
uncharacterized LOC122577215, transcript variant X5
homeobox protein Hox-A4, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
homeobox protein Hox-A4, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC122577374, transcript variant X1
uncharacterized LOC122577374, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
histone-lysine N-methyltransferase SETMAR-like
homeobox protein Hox-B1a, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
homeobox protein Hox-B1a, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC122577316, transcript variant X2
uncharacterized LOC122577316, transcript variant X1
mitochondrial import inner membrane translocase subunit Tim17-A, transcript variant X4
mitochondrial import inner membrane translocase subunit Tim17-A, transcript variant X1
mitochondrial import inner membrane translocase subunit Tim17-A, transcript variant X2
mitochondrial import inner membrane translocase subunit Tim17-A, transcript variant X3
mitochondrial import inner membrane translocase subunit Tim17-A
transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
apidaecins type 22-like, transcript variant X4
apidaecins type 22-like, transcript variant X3
apidaecins type 22-like, transcript variant X1
apidaecins type 22-like, transcript variant X2
protein AAR2 homolog, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
protein AAR2 homolog, transcript variant X3
protein AAR2 homolog, transcript variant X2
protein AAR2 homolog, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
protein AAR2 homolog, transcript variant X1
protein AAR2 homolog, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
uncharacterized LOC122577306, transcript variant X1
uncharacterized LOC122577306, transcript variant X2
uncharacterized protein LOC122577306 isoform X1
uncharacterized protein LOC122577306 isoform X2
uncharacterized LOC122577315, transcript variant X2
uncharacterized LOC122577315, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC122577366, transcript variant X1
uncharacterized LOC122577366, transcript variant X4
uncharacterized LOC122577368, transcript variant X7
uncharacterized LOC122577368, transcript variant X5
uncharacterized protein LOC122577366 isoform X1
uncharacterized LOC122577368, transcript variant X1
uncharacterized protein LOC122577368 isoform X1
uncharacterized LOC122577366, transcript variant X2
uncharacterized LOC122577368, transcript variant X8
uncharacterized LOC122577368, transcript variant X2
uncharacterized protein LOC122577368 isoform X2
uncharacterized LOC122577368, transcript variant X6
uncharacterized LOC122577368, transcript variant X3
uncharacterized LOC122577368, transcript variant X4
uncharacterized protein LOC122577366 isoform X2
uncharacterized LOC122577366, transcript variant X3
uncharacterized protein LOC122577366 isoform X3
uncharacterized protein LOC122577366 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
dnaJ homolog subfamily B member 6-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
dnaJ homolog subfamily B member 6-like, transcript variant X2
dnaJ homolog subfamily B member 6-like, transcript variant X3
dnaJ homolog subfamily B member 6-like, transcript variant X4
uncharacterized LOC122577322, transcript variant X3
uncharacterized LOC122577322, transcript variant X2
uncharacterized LOC122577322, transcript variant X1
uncharacterized LOC122577318, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
uncharacterized LOC122577318, transcript variant X3
uncharacterized protein LOC122577318 isoform X3
uncharacterized protein LOC122577318 isoform X1
uncharacterized LOC122577318, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized LOC122577318, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized protein LOC122577318 isoform X4
uncharacterized protein LOC122577318 isoform X2
ribonuclease P protein subunit p20-like, transcript variant X1
ribonuclease P protein subunit p20-like, transcript variant X2
ribonuclease P protein subunit p20-like isoform X1
ribonuclease P protein subunit p20-like isoform X2
dentin sialophosphoprotein-like isoform X2
cadherin EGF LAG seven-pass G-type receptor 1-like, transcript variant X2
cadherin EGF LAG seven-pass G-type receptor 1-like, transcript variant X3
cadherin EGF LAG seven-pass G-type receptor 1-like, transcript variant X1
cadherin EGF LAG seven-pass G-type receptor 1-like
uncharacterized LOC122577329, transcript variant X2
uncharacterized LOC122577329, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
trafficking protein particle complex subunit 5, transcript variant X12
trafficking protein particle complex subunit 5, transcript variant X11
trafficking protein particle complex subunit 5 isoform X9
trafficking protein particle complex subunit 5 isoform X8
trafficking protein particle complex subunit 5, transcript variant X3
trafficking protein particle complex subunit 5, transcript variant X1
trafficking protein particle complex subunit 5, transcript variant X9
trafficking protein particle complex subunit 5, transcript variant X2
trafficking protein particle complex subunit 5, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
WD repeat-containing protein 6 isoform X2
WD repeat-containing protein 6 isoform X1
WD repeat-containing protein 6 isoform X6
trafficking protein particle complex subunit 5, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
trafficking protein particle complex subunit 5, transcript variant X6
trafficking protein particle complex subunit 5, transcript variant X5
trafficking protein particle complex subunit 5, transcript variant X8
WD repeat-containing protein 6 isoform X3
WD repeat-containing protein 6 isoform X4
WD repeat-containing protein 6 isoform X5
trafficking protein particle complex subunit 5, transcript variant X10
WD repeat-containing protein 6 isoform X7
putative glutathione-specific gamma-glutamylcyclotransferase 2, transcript variant X1
putative glutathione-specific gamma-glutamylcyclotransferase 2, transcript variant X2
putative glutathione-specific gamma-glutamylcyclotransferase 2
uncharacterized LOC122577303, transcript variant X3
uncharacterized LOC122577303, transcript variant X4
uncharacterized LOC122577303, transcript variant X2
uncharacterized LOC122577303, transcript variant X5
uncharacterized LOC122577303, transcript variant X1
RNA 3'-terminal phosphate cyclase, transcript variant X3
RNA 3'-terminal phosphate cyclase, transcript variant X1
RNA 3'-terminal phosphate cyclase, transcript variant X2
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase, transcript variant X1
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase, transcript variant X4
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase, transcript variant X2
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase, transcript variant X5
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase, transcript variant X3
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase isoform X1
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase isoform X2
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase isoform X3
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase isoform X5
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase isoform X4
heparan-alpha-glucosaminide N-acetyltransferase-like, transcript variant X5
heparan-alpha-glucosaminide N-acetyltransferase-like, transcript variant X4
heparan-alpha-glucosaminide N-acetyltransferase-like, transcript variant X1
heparan-alpha-glucosaminide N-acetyltransferase-like, transcript variant X7
heparan-alpha-glucosaminide N-acetyltransferase-like, transcript variant X6
heparan-alpha-glucosaminide N-acetyltransferase-like, transcript variant X3
heparan-alpha-glucosaminide N-acetyltransferase-like, transcript variant X2
heparan-alpha-glucosaminide N-acetyltransferase-like isoform X1
heparan-alpha-glucosaminide N-acetyltransferase-like isoform X3
heparan-alpha-glucosaminide N-acetyltransferase-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
metallophosphoesterase 1 homolog, transcript variant X3
metallophosphoesterase 1 homolog, transcript variant X4
metallophosphoesterase 1 homolog, transcript variant X2
metallophosphoesterase 1 homolog, transcript variant X1
trichohyalin-like, transcript variant X5
trichohyalin-like, transcript variant X3
trichohyalin-like, transcript variant X2
trichohyalin-like, transcript variant X4
trichohyalin-like, transcript variant X1
alpha- and gamma-adaptin-binding protein p34-like, transcript variant X2
alpha- and gamma-adaptin-binding protein p34-like, transcript variant X1
alpha- and gamma-adaptin-binding protein p34-like isoform X2
alpha- and gamma-adaptin-binding protein p34-like isoform X1
la-related protein 7, transcript variant X1
la-related protein 7, transcript variant X3
la-related protein 7, transcript variant X2
H/ACA ribonucleoprotein complex subunit 1, transcript variant X2
H/ACA ribonucleoprotein complex subunit 1, transcript variant X1
H/ACA ribonucleoprotein complex subunit 1
dehydrodolichyl diphosphate synthase complex subunit Nus1
FMRFamide-related peptides-like, transcript variant X1
FMRFamide-related peptides-like, transcript variant X2
FMRFamide-related peptides-like isoform X1
FMRFamide-related peptides-like isoform X2
transient receptor potential protein, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transient receptor potential protein, transcript variant X3
transient receptor potential protein, transcript variant X2
transient receptor potential protein isoform X1
transient receptor potential protein isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
SAP domain-containing ribonucleoprotein, transcript variant X2
SAP domain-containing ribonucleoprotein, transcript variant X1
SAP domain-containing ribonucleoprotein isoform X2
SAP domain-containing ribonucleoprotein isoform X1
ubiquitin-fold modifier-conjugating enzyme 1
arginine-hydroxylase NDUFAF5, mitochondrial
tyrosine-protein phosphatase corkscrew, transcript variant X1
tyrosine-protein phosphatase corkscrew, transcript variant X2
tyrosine-protein phosphatase corkscrew, transcript variant X3
tyrosine-protein phosphatase corkscrew isoform X1
tyrosine-protein phosphatase corkscrew isoform X2
sphingolipid delta(4)-desaturase DES1, transcript variant X1
sphingolipid delta(4)-desaturase DES1 isoform X1
sphingolipid delta(4)-desaturase DES1, transcript variant X3
sphingolipid delta(4)-desaturase DES1, transcript variant X2
sphingolipid delta(4)-desaturase DES1, transcript variant X4
sphingolipid delta(4)-desaturase DES1 isoform X2
palmitoyltransferase ZDHHC2-like, transcript variant X1
palmitoyltransferase ZDHHC2-like, transcript variant X2
palmitoyltransferase ZDHHC2-like, transcript variant X4
palmitoyltransferase ZDHHC2-like, transcript variant X3
palmitoyltransferase ZDHHC15B-like isoform X2
palmitoyltransferase ZDHHC2-like isoform X3
palmitoyltransferase ZDHHC15B-like isoform X1
palmitoyltransferase ZDHHC2-like isoform X4
DNA polymerase zeta catalytic subunit, transcript variant X5
DNA polymerase zeta catalytic subunit, transcript variant X6
DNA polymerase zeta catalytic subunit, transcript variant X7
DNA polymerase zeta catalytic subunit, transcript variant X1
DNA polymerase zeta catalytic subunit, transcript variant X3
DNA polymerase zeta catalytic subunit, transcript variant X2
DNA polymerase zeta catalytic subunit, transcript variant X4
DNA polymerase zeta catalytic subunit isoform X1
DNA polymerase zeta catalytic subunit isoform X3
DNA polymerase zeta catalytic subunit isoform X2
DNA polymerase zeta catalytic subunit isoform X4
putative uncharacterized protein DDB_G0282133, transcript variant X2
putative uncharacterized protein DDB_G0282133, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
putative uncharacterized protein DDB_G0282133 isoform X1
putative uncharacterized protein DDB_G0282133 isoform X2
bifunctional glutamate/proline--tRNA ligase
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: bifunctional glutamate/proline--tRNA ligase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
dihydroxyacetone phosphate acyltransferase, transcript variant X3
dihydroxyacetone phosphate acyltransferase, transcript variant X1
dihydroxyacetone phosphate acyltransferase, transcript variant X2
dihydroxyacetone phosphate acyltransferase isoform X1
dihydroxyacetone phosphate acyltransferase isoform X2
eukaryotic translation initiation factor 2 subunit 3, Y-linked-like, transcript variant X1
eukaryotic translation initiation factor 2 subunit 3, Y-linked-like, transcript variant X5
eukaryotic translation initiation factor 2 subunit 3, Y-linked-like isoform X3
histone-lysine N-methyltransferase SUV39H2-like isoform X1
eukaryotic translation initiation factor 2 subunit 3, Y-linked-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
eukaryotic translation initiation factor 2 subunit 3, Y-linked-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
eukaryotic translation initiation factor 2 subunit 3, Y-linked-like, transcript variant X2
histone-lysine N-methyltransferase SUV39H2-like isoform X2
uncharacterized LOC122577248, transcript variant X3
uncharacterized LOC122577248, transcript variant X2
uncharacterized LOC122577248, transcript variant X1
uncharacterized LOC122577248, transcript variant X6
uncharacterized LOC122577248, transcript variant X7
uncharacterized LOC122577248, transcript variant X4
uncharacterized LOC122577248, transcript variant X5
uncharacterized LOC122577248, transcript variant X9
uncharacterized LOC122577248, transcript variant X8
uncharacterized protein LOC122577248 isoform X2
uncharacterized protein LOC122577248 isoform X1
uncharacterized protein LOC122577248 isoform X4
uncharacterized protein LOC122577248 isoform X3
TBC1 domain family member 10A, transcript variant X7
TBC1 domain family member 10A, transcript variant X9
TBC1 domain family member 10A, transcript variant X1
TBC1 domain family member 10A, transcript variant X3
TBC1 domain family member 10A, transcript variant X6
TBC1 domain family member 10A, transcript variant X8
TBC1 domain family member 10A, transcript variant X4
TBC1 domain family member 10A, transcript variant X2
TBC1 domain family member 10A, transcript variant X5
TBC1 domain family member 10A, transcript variant X10
TBC1 domain family member 10A, transcript variant X11
uncharacterized LOC122577257, transcript variant X2
uncharacterized LOC122577257, transcript variant X1
uncharacterized protein LOC122577257 isoform X2
uncharacterized protein LOC122577257 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
deaminated glutathione amidase, transcript variant X1
deaminated glutathione amidase, transcript variant X2
deaminated glutathione amidase isoform X1
deaminated glutathione amidase isoform X2
tyrosine-protein kinase Btk29A, transcript variant X1
tyrosine-protein kinase Btk29A, transcript variant X3
tyrosine-protein kinase Btk29A, transcript variant X2
tyrosine-protein kinase Btk29A, transcript variant X9
tyrosine-protein kinase Btk29A, transcript variant X4
tyrosine-protein kinase Btk29A, transcript variant X6
tyrosine-protein kinase Btk29A, transcript variant X8
tyrosine-protein kinase Btk29A, transcript variant X7
tyrosine-protein kinase Btk29A, transcript variant X5
tyrosine-protein kinase Btk29A isoform X1
tyrosine-protein kinase Btk29A isoform X2
tyrosine-protein kinase Btk29A isoform X3
tyrosine-protein kinase Btk29A isoform X6
tyrosine-protein kinase Btk29A isoform X5
tyrosine-protein kinase Btk29A isoform X4
insulin-like growth factor-binding protein complex acid labile subunit
uncharacterized LOC122577241, transcript variant X4
uncharacterized LOC122577241, transcript variant X3
uncharacterized LOC122577241, transcript variant X2
uncharacterized LOC122577241, transcript variant X1
uncharacterized LOC122577241, transcript variant X5
uncharacterized LOC122577241, transcript variant X14
uncharacterized LOC122577241, transcript variant X12
uncharacterized LOC122577241, transcript variant X13
uncharacterized LOC122577241, transcript variant X7
uncharacterized LOC122577241, transcript variant X8
uncharacterized LOC122577241, transcript variant X10
uncharacterized LOC122577241, transcript variant X9
uncharacterized LOC122577241, transcript variant X11
uncharacterized LOC122577241, transcript variant X6
mediator of RNA polymerase II transcription subunit 7
electron transfer flavoprotein subunit alpha, mitochondrial
39S ribosomal protein L22, mitochondrial, transcript variant X2
39S ribosomal protein L22, mitochondrial, transcript variant X1
39S ribosomal protein L22, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00619
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC122577228, transcript variant X1
uncharacterized LOC122577228, transcript variant X4
uncharacterized LOC122577228, transcript variant X2
uncharacterized LOC122577228, transcript variant X5
uncharacterized LOC122577228, transcript variant X3
chymotrypsin inhibitor-like, transcript variant X1
chymotrypsin inhibitor-like, transcript variant X2
chymotrypsin inhibitor-like, transcript variant X3
uncharacterized LOC122577185, transcript variant X9
uncharacterized LOC122577185, transcript variant X6
uncharacterized LOC122577185, transcript variant X5
uncharacterized LOC122577185, transcript variant X7
uncharacterized LOC122577185, transcript variant X8
uncharacterized LOC122577185, transcript variant X10
uncharacterized LOC122577185, transcript variant X2
uncharacterized LOC122577185, transcript variant X4
uncharacterized LOC122577185, transcript variant X3
uncharacterized LOC122577185, transcript variant X1
uncharacterized protein LOC122577185 isoform X3
uncharacterized protein LOC122577185 isoform X2
uncharacterized protein LOC122577185 isoform X1
flavin-containing monooxygenase FMO GS-OX-like 6, transcript variant X1
flavin-containing monooxygenase FMO GS-OX-like 6, transcript variant X2
flavin-containing monooxygenase FMO GS-OX-like 6 isoform X1
flavin-containing monooxygenase FMO GS-OX3-like isoform X2
uncharacterized LOC122577332, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized protein LOC122577332 isoform X6
uncharacterized LOC122577332, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized protein LOC122577332 isoform X8
uncharacterized LOC122577332, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized protein LOC122577332 isoform X2
uncharacterized LOC122577332, transcript variant X7
uncharacterized LOC122577332, transcript variant X1
uncharacterized LOC122577332, transcript variant X3
uncharacterized LOC122577332, transcript variant X4
uncharacterized LOC122577332, transcript variant X5
uncharacterized protein LOC122577332 isoform X7
uncharacterized protein LOC122577332 isoform X5
uncharacterized protein LOC122577332 isoform X4
uncharacterized protein LOC122577332 isoform X3
uncharacterized protein LOC122577332 isoform X1
leucine-rich repeat transmembrane neuronal protein 4-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: leucine-rich repeat transmembrane neuronal protein 4-like
uncharacterized LOC122577330, transcript variant X7
uncharacterized LOC122577330, transcript variant X4
uncharacterized LOC122577330, transcript variant X1
uncharacterized LOC122577330, transcript variant X5
uncharacterized LOC122577330, transcript variant X2
uncharacterized LOC122577330, transcript variant X6
uncharacterized LOC122577330, transcript variant X3
uncharacterized protein LOC122577330 isoform X1
uncharacterized protein LOC122577330 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC122577339, transcript variant X3
uncharacterized LOC122577339, transcript variant X2
uncharacterized LOC122577339, transcript variant X1
putative uncharacterized protein DDB_G0271982, transcript variant X1
putative uncharacterized protein DDB_G0271982, transcript variant X2
putative uncharacterized protein DDB_G0271982
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
LOW QUALITY PROTEIN: homeobox protein 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
golgin subfamily A member 6-like protein 22
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
uncharacterized LOC122577365, transcript variant X1
uncharacterized LOC122577365, transcript variant X2