Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 35, Agelaius phoeniceus 1.1, whole genome shotgun sequence.
type: Entry
definition: Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 35, Agelaius phoeniceus 1.1, whole genome shotgun sequence.
sequence version: NC_071708.1
sequence date: 2023-03-25
sequence: sequence
division: CON
label: NC_071708.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA942290
dblink: SAMN19590559
keyword: WGS
keyword: RefSeq
source: Agelaius phoeniceus (red-winged blackbird)
organism: Agelaius phoeniceus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Icteridae; Agelaius.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM036748.1.\nAssembly name: Agelaius phoeniceus 1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Brood Parasitic Bird Genomes\nConsortium on 2022/12/05. The original whole-genome shotgun project\nhas the accession JAIWQD000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Brood Parasitic Bird Genomes Consortium\nAssembly Method :: HiFasm v. APR-2021\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 38.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_020745825.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/22/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 2665703
topology: linear
so has quality: SO_0000987
location: 1..2665703
location: region:1-2665703:1
RO_0002162: 39638

NC_071708
type: RefSeq
SIO_000068: refseq

PRJNA942290
type: BioProject
SIO_000068: bioproject

SAMN19590559
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2665703:1
position: 2665703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2665703:1:source
so part of: sequence
organism: Agelaius phoeniceus
mol type: genomic DNA
isolate: BioBank_ID:100140
specimen voucher: MCZ:Orn:364415
chromosome: 35
sex: female
tissue type: brain
dev stage: adult
country: USA: Hidalgo County, Texas
collection date: 2018-03-30
collected by: Kathleen Lynch

39638
type: Taxonomy
SIO_000068: taxonomy

LOC129132375
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132375
note: olfactory receptor 14J1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 245848..246780
location: region:245848-246780:1
so has part: feature:245848-246780:1:exon
subclass of: SO_0000010

129132375
type: Gene
SIO_000068: ncbigene

position:245848:1
position: 245848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246780:1
position: 246780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245848-246780:1:exon

LOC129132375
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132375
product: olfactory receptor 14J1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins
transcript id: XM_054651447.1
SIO_010081: LOC129132375
subclass of: SO_0000673
so part of: LOC129132375
location: 245848..246780
location: region:245848-246780:1
so has part: feature:245848-246780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:245848-246780:1:exon

LOC129132375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14J1-like
translation: MSNSSCISHFLLLALADTRQLQLLHFCLLLGISLAALLGNGLIISAVACGHHLHTPMFFFLLNLALSDLGSICTTVPKAMHNSLWDTSNISYTGCAAQLFFFLFFISAEFFLLTIMCYDHYMSICKPLHYGTLLGSRACAHMAAAAWGCAFLYSLLHTANTFSLPLCHGNALGQFFCEIPQILKLSCSHSYLREHGLVAVSACLLFGCFVFMVFSYVQIFRVVLRIPSEQGRHKAFSTCLPHLAVVTLFLSSAIFAHLKPPSISSPSLDLAVSVLYSVVPPALNPLIYSLRNQELKAAVRRLMTGCFQEH
SIO_010081: LOC129132375
subclass of: SO_0000673
so part of: LOC129132375
location: 245848..246780
location: region:245848-246780:1
so has part: feature:245848-246780:1:exon

XP_054507422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245848-246780:1:exon

LOC129132373
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132373
note: olfactory receptor 14J1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 429350..>430270
location: region:429350-430270:1
so has part: feature:429350-430270:1:exon
subclass of: SO_0000010

129132373
type: Gene
SIO_000068: ncbigene

position:429350:1
position: 429350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430270:1
position: 430270
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429350-430270:1:exon

LOC129132373
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132373
product: olfactory receptor 14J1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins
transcript id: XM_054651446.1
SIO_010081: LOC129132373
subclass of: SO_0000673
so part of: LOC129132373
location: 429350..>430270
location: region:429350-430270:1
so has part: feature:429350-430270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:429350-430270:1:exon

LOC129132373
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132373
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:429494..429496,aa:OTHER)
product: LOW QUALITY PROTEIN: olfactory receptor 14J1-like
translation: MSNSSSIRHFLLLALADTRQLQLLHFCLLLGISLAALLGNGLIISAVAXGHHLHTPMFFFLLNLALADLGSICTTVPKAMHNSLWDTSNISYTGCAAQLFFFLFFISAEFFLLTIMCYDRYVSICKPLHYGTLLGSRACAHMAAAAWASAFLYSLLHTANTFSLPLCHGNALGQFFCEIPQILKLSCSHSYLREHGLVAVSACLLFGCFVFMVFSYVQIFRVVLRIPSEQGRHKAFSTCLPHLVVVSLFLSSASFAHLKPPSISSPSLDLAVSVLYSVVPPALNPLIYSLRNQELKAAVRRLMTGCF
SIO_010081: LOC129132373
subclass of: SO_0000673
so part of: LOC129132373
location: 429350..>430270
location: region:429350-430270:1
so has part: feature:429350-430270:1:exon

XP_054507421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429350-430270:1:exon

LOC129132372
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132372
note: serine/threonine-protein kinase pim-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <571853..678092
location: region:571853-678092:1
so has part: feature:571853-678092:1:exon
subclass of: SO_0000010

129132372
type: Gene
SIO_000068: ncbigene

position:571853:1
position: 571853
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:678092:1
position: 678092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571853-678092:1:exon

LOC129132372
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132372
product: serine/threonine-protein kinase pim-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_054651445.1
SIO_010081: LOC129132372
subclass of: SO_0000673
so part of: LOC129132372
location: join(<571853..572121,675862..676210,676331..676381,676586..676952,677567..677743,677986..678092)
location: region:571853-678092:1
so has part: feature:571853-572121:1:exon
so has part: feature:675862-676210:1:exon
so has part: feature:676331-676381:1:exon
so has part: feature:676586-676952:1:exon
so has part: feature:677567-677743:1:exon
so has part: feature:677986-678092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:571853-572121:1:exon

position:572121:1
position: 572121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675862-676210:1:exon

position:675862:1
position: 675862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676210:1
position: 676210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:676331-676381:1:exon

position:676331:1
position: 676331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676381:1
position: 676381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:676586-676952:1:exon

position:676586:1
position: 676586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676952:1
position: 676952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:677567-677743:1:exon

position:677567:1
position: 677567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677743:1
position: 677743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:677986-678092:1:exon

position:677986:1
position: 677986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC129132372
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132372
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase pim-1-like
translation: GRAMPPARPRPRAGLPRARPRPSRRGLASARLWPYWRWRCWAGISAWSWGGIAALCLGLAQARPRPRGRLQPRARPRPRPRPRPRPRPRLRLRPRLRLLPGPAEDTRGAAAPAASAAASPARAPPLGSAAAGPEPPGPGAGGDARPGPLGERSGAVAGPGPSADSRVSPAGKAHEALQERYRVGSLLGRGGFGSVCSGTRLSDGAPVAIKRVPRDRIRHWGELPDGSSAPLEIVLLAKVSRGCASVIQLLEWLELPDSFLLVLERPERCQELSGFLAERGFLPEEEARALFRQVLEAVQHCTACGVLHRDIKPENILLDLASGQLKLIDFGCGAFLQDTAYTQFAGTLSYSPPEWIQHQCYHGEAATIWSLGLLLCHLVMGKHPFRRGQEIIRGRILFPRWLSQECQDIIKRCLSMQPSDRPSLEELFCHPWVQGVPLP
SIO_010081: LOC129132372
subclass of: SO_0000673
so part of: LOC129132372
location: join(<571853..572121,675862..676210,676331..676381,676586..676952,677567..677743,677986..678092)
location: region:571853-678092:1
so has part: feature:571853-572121:1:exon
so has part: feature:675862-676210:1:exon
so has part: feature:676331-676381:1:exon
so has part: feature:676586-676952:1:exon
so has part: feature:677567-677743:1:exon
so has part: feature:677986-678092:1:exon

XP_054507420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571853-572121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675862-676210:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676331-676381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676586-676952:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:677567-677743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:677986-678092:1:exon

LOC129132371
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132371
note: olfactory receptor 14A16-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(641900..642832)
location: region:641900-642832:-1
so has part: feature:641900-642832:-1:exon
subclass of: SO_0000010

129132371
type: Gene
SIO_000068: ncbigene

position:641900:-1
position: 641900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642832:-1
position: 642832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641900-642832:-1:exon

LOC129132371
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132371
product: olfactory receptor 14A16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
transcript id: XM_054651444.1
SIO_010081: LOC129132371
subclass of: SO_0000673
so part of: LOC129132371
location: complement(641900..642832)
location: region:641900-642832:-1
so has part: feature:641900-642832:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:641900-642832:-1:exon

LOC129132371
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132371
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14A16-like
translation: MSNSSSIRHFLLLALADTRQLQLLHFCLLLGISLAALLGNGLIISTVACGHHLHTPMFFFLLNLALADLGSICTTVPKAMHNSLWDTSNISYTGCAAQLFLVFFFLSAEYFLLTVMCYDRYVSICKPLHYGTLLGSRACAHMAAAAWARAFLYALMHTANTFSLPLCHGNALGQFFCEVPQILKLSCSKSYLRELGLLAVSACFIFGCFVFIVFSYVQIFRAVLRIPSEQGQHKAFSTCLPHLAVVSLFLSTGLFSYLKPASMSSPSLDLALSVLYSVVPPALNPLIYSLRNQELKAAVWTLITGWFQKH
SIO_010081: LOC129132371
subclass of: SO_0000673
so part of: LOC129132371
location: complement(641900..642832)
location: region:641900-642832:-1
so has part: feature:641900-642832:-1:exon

XP_054507419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:641900-642832:-1:exon

LOC129132358
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132358
note: olfactory receptor 14C36-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 695620..696552
location: region:695620-696552:1
so has part: feature:695620-696552:1:exon
subclass of: SO_0000010

129132358
type: Gene
SIO_000068: ncbigene

position:695620:1
position: 695620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696552:1
position: 696552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695620-696552:1:exon

LOC129132358
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132358
product: olfactory receptor 14C36-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_054651435.1
SIO_010081: LOC129132358
subclass of: SO_0000673
so part of: LOC129132358
location: 695620..696552
location: region:695620-696552:1
so has part: feature:695620-696552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:695620-696552:1:exon

LOC129132358
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14C36-like
translation: MSNSSSIRHFLLLALADTWQLQLLHFCLLLGISLAALLGNGLIISAVACGHHLHTPMFFFLLNLALSDLGSICTTVPKAMHNSLWDTSNISYTGCAAQLYFFVFFISAEYSLLTVMCYDRYVSICKPLHYGTLLGSRACAHMAAAAWASAFLNALMHTANTFSLPLCYGNALGQFFCEIPQILKLSCSKSQLRELGLLVVTANLSFGCFVFIVFSYVQIFRAVLRIPSEQERHKAFSTCLPHLAVVSLFVSTIIFAHLKPPSISSPSLDLALSVLYSVVPPALNPLTYSLRNQELKASVCTLMTGCFHKH
SIO_010081: LOC129132358
subclass of: SO_0000673
so part of: LOC129132358
location: 695620..696552
location: region:695620-696552:1
so has part: feature:695620-696552:1:exon

XP_054507410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:695620-696552:1:exon

LOC129132381
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132381
note: 5.8S ribosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 793313..793465
location: region:793313-793465:1
so has part: feature:793313-793465:1:exon
subclass of: SO_0000573

129132381
type: Gene
SIO_000068: ncbigene

position:793313:1
position: 793313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793465:1
position: 793465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793313-793465:1:exon

LOC129132381
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 39638
gene: LOC129132381
product: 5.8S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_008535791.1
SIO_010081: LOC129132381
subclass of: SO_0000673
so part of: LOC129132381
location: 793313..793465
location: region:793313-793465:1
so has part: feature:793313-793465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:793313-793465:1:exon

LOC129132383
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132383
note: 18S ribosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(797236..799058)
location: region:797236-799058:-1
so has part: feature:797236-799058:-1:exon
subclass of: SO_0000573

129132383
type: Gene
SIO_000068: ncbigene

position:797236:-1
position: 797236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799058:-1
position: 799058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797236-799058:-1:exon

LOC129132383
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 39638
gene: LOC129132383
product: 18S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF01960
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_008535792.1
SIO_010081: LOC129132383
subclass of: SO_0000673
so part of: LOC129132383
location: complement(797236..799058)
location: region:797236-799058:-1
so has part: feature:797236-799058:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:797236-799058:-1:exon

LOC129132376
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132376
note: olfactory receptor 14J1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 867733..868665
location: region:867733-868665:1
so has part: feature:867733-868665:1:exon
subclass of: SO_0000010

129132376
type: Gene
SIO_000068: ncbigene

position:867733:1
position: 867733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868665:1
position: 868665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867733-868665:1:exon

LOC129132376
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132376
product: olfactory receptor 14J1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins
transcript id: XM_054651448.1
SIO_010081: LOC129132376
subclass of: SO_0000673
so part of: LOC129132376
location: 867733..868665
location: region:867733-868665:1
so has part: feature:867733-868665:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867733-868665:1:exon

LOC129132376
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14J1-like
translation: MSNSSCIRHFLLLALADTRQLQLLHFCLLLGISLAALLGNGLIISAVACGHHLHTPMFFFLLNLALTDLGSICTTVPKAMHNSLWDTSNISYTGCAAQLFFFLFFISAEFFLLTIMCYDRHVSICKPLHYRTLLGSRACAHMAAAAWASAFLYSLLHTANTFSLPLCHGNALGQFFCEIPQILKLSCSKSKLREHGLVAVSACLLFGCFVFMVFSYVQIFRVVLRIPSEQGRHKAFSTCLPHLAVVSLFLSSAIFAHLKPPSISSPSLDLAVSVLYSVVPPALNPLIYSLRNQELKAAVRRLMTGCFQEH
SIO_010081: LOC129132376
subclass of: SO_0000673
so part of: LOC129132376
location: 867733..868665
location: region:867733-868665:1
so has part: feature:867733-868665:1:exon

XP_054507423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:867733-868665:1:exon

LOC129132377
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132377
note: olfactory receptor 14J1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 927309..>928214
location: region:927309-928214:1
so has part: feature:927309-928214:1:exon
subclass of: SO_0000010

129132377
type: Gene
SIO_000068: ncbigene

position:927309:1
position: 927309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928214:1
position: 928214
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927309-928214:1:exon

LOC129132377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132377
product: olfactory receptor 14J1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
transcript id: XM_054651449.1
SIO_010081: LOC129132377
subclass of: SO_0000673
so part of: LOC129132377
location: 927309..>928214
location: region:927309-928214:1
so has part: feature:927309-928214:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:927309-928214:1:exon

LOC129132377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14J1-like
translation: MSNSSCIRHFLLLALADTRQLQLLHFCLLLGISLAALLGNGLSISAVACGHHLHTPMFFFLLNLALADLGSICTTVPKAMHNSLWDTSNIPYTGCAAQLFFFLFFISAEFFLLTIMCYDRYVSICKPLHYGTLLGSRACAHMAAAAWGCAFLYSLLHTANTFSLPLCHGNALGQFFCEIPQILKLSCSHSYLREHGLVAVSACLLFGCFVFMVFSYVQIFRVMLRIPSEQGQHKAFSTCLPHLAVVSLFLSSAIFAHLKPPSISSPSLDLAVSVLYSVVPPALNPLIYSLRNQELKAAVRRL
SIO_010081: LOC129132377
subclass of: SO_0000673
so part of: LOC129132377
location: 927309..>928214
location: region:927309-928214:1
so has part: feature:927309-928214:1:exon

XP_054507424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:927309-928214:1:exon

LOC129132359
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132359
note: olfactory receptor 14A16-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1000099..1041395)
location: region:1000099-1041395:-1
so has part: feature:1000099-1041395:-1:exon

129132359
type: Gene
SIO_000068: ncbigene

position:1000099:-1
position: 1000099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041395:-1
position: 1041395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000099-1041395:-1:exon

LOC129132359
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132359
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC129132359
subclass of: SO_0000673
so part of: LOC129132359
location: complement(1000099..1000878)
location: region:1000099-1000878:-1
so has part: feature:1000099-1000878:-1:exon

position:1000878:-1
position: 1000878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000099-1000878:-1:exon

LOC129132359
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132359
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC129132359
subclass of: SO_0000673
so part of: LOC129132359
location: complement(1031416..1031755)
location: region:1031416-1031755:-1
so has part: feature:1031416-1031755:-1:exon

position:1031416:-1
position: 1031416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031755:-1
position: 1031755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031416-1031755:-1:exon

LOC129132359
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132359
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC129132359
subclass of: SO_0000673
so part of: LOC129132359
location: complement(1041358..1041395)
location: region:1041358-1041395:-1
so has part: feature:1041358-1041395:-1:exon

position:1041358:-1
position: 1041358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1041358-1041395:-1:exon

LOC129132385
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132385
note: 5.8S ribosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1043976..1044125
location: region:1043976-1044125:1
so has part: feature:1043976-1044125:1:exon
subclass of: SO_0000573

129132385
type: Gene
SIO_000068: ncbigene

position:1043976:1
position: 1043976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044125:1
position: 1044125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043976-1044125:1:exon

LOC129132385
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 39638
gene: LOC129132385
product: 5.8S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_008535794.1
SIO_010081: LOC129132385
subclass of: SO_0000673
so part of: LOC129132385
location: 1043976..1044125
location: region:1043976-1044125:1
so has part: feature:1043976-1044125:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1043976-1044125:1:exon

LOC129132384
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132384
note: 5.8S ribosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1077490..1077642
location: region:1077490-1077642:1
so has part: feature:1077490-1077642:1:exon
subclass of: SO_0000573

129132384
type: Gene
SIO_000068: ncbigene

position:1077490:1
position: 1077490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077642:1
position: 1077642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077490-1077642:1:exon

LOC129132384
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 39638
gene: LOC129132384
product: 5.8S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_008535793.1
SIO_010081: LOC129132384
subclass of: SO_0000673
so part of: LOC129132384
location: 1077490..1077642
location: region:1077490-1077642:1
so has part: feature:1077490-1077642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1077490-1077642:1:exon

LOC129132360
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132360
note: olfactory receptor 14A16-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1114940..1115872)
location: region:1114940-1115872:-1
so has part: feature:1114940-1115872:-1:exon
subclass of: SO_0000010

129132360
type: Gene
SIO_000068: ncbigene

position:1114940:-1
position: 1114940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115872:-1
position: 1115872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114940-1115872:-1:exon

LOC129132360
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132360
product: olfactory receptor 14A16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_054651436.1
SIO_010081: LOC129132360
subclass of: SO_0000673
so part of: LOC129132360
location: complement(1114940..1115872)
location: region:1114940-1115872:-1
so has part: feature:1114940-1115872:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1114940-1115872:-1:exon

LOC129132360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132360
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14A16-like
translation: MSNSSCIRHFLLLALADTRQLQLLHFCLLLGISLAALLGNGLIISAVACGHHLHTPMFFFLLNLALSDLGSICTTVPKAMHNSLWDTSNISYKGCAAQLYFFVFFISAEYSLLTVMCYDRYVSSCKPLHYGTLLGSRACAHMAAAAWASAFLHALMHTANTFSLPLCHGNALGQFFCEIPQILKLSCSKSQLRELGLLVVTANLSFGCFVFIVFSYVQIFRAVLRIPSEQGRRKAFSTCLPHLAVVSLFVSTIIFAHLKPCSISSPSLDLALSVLYSVVPPALNPLIYSLRNKELKASVCKLMTGCFHKH
SIO_010081: LOC129132360
subclass of: SO_0000673
so part of: LOC129132360
location: complement(1114940..1115872)
location: region:1114940-1115872:-1
so has part: feature:1114940-1115872:-1:exon

XP_054507411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1114940-1115872:-1:exon

LOC129132386
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132386
note: 5.8S ribosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1159636..1159788)
location: region:1159636-1159788:-1
so has part: feature:1159636-1159788:-1:exon
subclass of: SO_0000573

129132386
type: Gene
SIO_000068: ncbigene

position:1159636:-1
position: 1159636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159788:-1
position: 1159788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159636-1159788:-1:exon

LOC129132386
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 39638
gene: LOC129132386
product: 5.8S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_008535795.1
SIO_010081: LOC129132386
subclass of: SO_0000673
so part of: LOC129132386
location: complement(1159636..1159788)
location: region:1159636-1159788:-1
so has part: feature:1159636-1159788:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1159636-1159788:-1:exon

LOC129132387
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132387
note: 5.8S ribosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 1329383..1329520
location: region:1329383-1329520:1
so has part: feature:1329383-1329520:1:exon

129132387
type: Gene
SIO_000068: ncbigene

position:1329383:1
position: 1329383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1329520:1
position: 1329520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1329383-1329520:1:exon

LOC129132387
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132387
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC129132387
subclass of: SO_0000673
so part of: LOC129132387
location: 1329383..1329520
location: region:1329383-1329520:1
so has part: feature:1329383-1329520:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1329383-1329520:1:exon

LOC129132362
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132362
note: olfactory receptor 14J1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1383199..1390196
location: region:1383199-1390196:1
so has part: feature:1383199-1390196:1:exon
subclass of: SO_0000010

129132362
type: Gene
SIO_000068: ncbigene

position:1383199:1
position: 1383199
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1390196:1
position: 1390196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383199-1390196:1:exon

LOC129132362
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132362
product: olfactory receptor 14J1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_054651437.1
SIO_010081: LOC129132362
subclass of: SO_0000673
so part of: LOC129132362
location: join(<1383199..1383651,1390029..1390196)
location: region:1383199-1390196:1
so has part: feature:1383199-1383651:1:exon
so has part: feature:1390029-1390196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1383199-1383651:1:exon

position:1383651:1
position: 1383651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1390029-1390196:1:exon

position:1390029:1
position: 1390029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC129132362
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14J1-like
translation: LHYGTLLGSRACAHMAAAAWACAFLNALMHTANTFSLPLCKGNALSQFFCEVPQMLKLSCAKSYLRELGLLAVSVCLSSGCFVFIVFSYVQIFRAVLRIPSEQGRHKAFSTCLPHLAVVSLFLSTGTFYYLKPPSLFSPSLDLALSVLYSVLTCKRNWLPAEHGKGRPQTGRSLVNIKTDTWGSAEDRNNSGRRSCSVSLMMLSAP
SIO_010081: LOC129132362
subclass of: SO_0000673
so part of: LOC129132362
location: join(<1383199..1383651,1390029..1390196)
location: region:1383199-1390196:1
so has part: feature:1383199-1383651:1:exon
so has part: feature:1390029-1390196:1:exon

XP_054507412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1383199-1383651:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1390029-1390196:1:exon

LOC129132368
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132368
note: olfactory receptor 14J1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1492514..1493446
location: region:1492514-1493446:1
so has part: feature:1492514-1493446:1:exon
subclass of: SO_0000010

129132368
type: Gene
SIO_000068: ncbigene

position:1492514:1
position: 1492514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1493446:1
position: 1493446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1492514-1493446:1:exon

LOC129132368
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132368
product: olfactory receptor 14J1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97 Proteins
transcript id: XM_054651441.1
SIO_010081: LOC129132368
subclass of: SO_0000673
so part of: LOC129132368
location: 1492514..1493446
location: region:1492514-1493446:1
so has part: feature:1492514-1493446:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1492514-1493446:1:exon

LOC129132368
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14J1-like
translation: MSNSSSIRHFLLLALADTRQLQLLHFCLLLGISLAALLGNGLIISAVACGHHLHTPMFFFLLNLALADLGSICTTVPKAMHNSLWDTSNISYTACAAQLFFFLFFISAEYSLLTIMCYDRYMSICKALHYGTLLGSRACAHMAAAAWASAFLYSLLHTANTFSLPLCHGNALGQFFCEIPQILKLSCSHSYLREHGLVAVSACFIFGCFVFIVFSYVQIFRAVLRIPSEQGRHKAFSTCLPHLAVVSLFLSSAIFAHLKPPSISSPSLDLAVSVLYSVVPPALNPLIYSLRNQELKAAVRRLMTGCFQKH
SIO_010081: LOC129132368
subclass of: SO_0000673
so part of: LOC129132368
location: 1492514..1493446
location: region:1492514-1493446:1
so has part: feature:1492514-1493446:1:exon

XP_054507416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1492514-1493446:1:exon

LOC129132363
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132363
note: olfactory receptor 14A16-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1560896..1561683
location: region:1560896-1561683:1
so has part: feature:1560896-1561683:1:exon

129132363
type: Gene
SIO_000068: ncbigene

position:1560896:1
position: 1560896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561683:1
position: 1561683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560896-1561683:1:exon

LOC129132363
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132363
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC129132363
subclass of: SO_0000673
so part of: LOC129132363
location: 1560896..1560970
location: region:1560896-1560970:1
so has part: feature:1560896-1560970:1:exon

position:1560970:1
position: 1560970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560896-1560970:1:exon

LOC129132363
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132363
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC129132363
subclass of: SO_0000673
so part of: LOC129132363
location: 1561109..1561683
location: region:1561109-1561683:1
so has part: feature:1561109-1561683:1:exon

position:1561109:1
position: 1561109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1561109-1561683:1:exon

LOC129132369
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132369
note: olfactory receptor 14A16-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1675372..1676304
location: region:1675372-1676304:1
so has part: feature:1675372-1676304:1:exon
subclass of: SO_0000010

129132369
type: Gene
SIO_000068: ncbigene

position:1675372:1
position: 1675372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1676304:1
position: 1676304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675372-1676304:1:exon

LOC129132369
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132369
product: olfactory receptor 14A16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90 Proteins
transcript id: XM_054651442.1
SIO_010081: LOC129132369
subclass of: SO_0000673
so part of: LOC129132369
location: 1675372..1676304
location: region:1675372-1676304:1
so has part: feature:1675372-1676304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1675372-1676304:1:exon

LOC129132369
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14A16-like
translation: MSNSSSIRHFLLLALADTRQLQLLHFCLLLGISLAALLGNGLIISAAACGHHLHTPMFFFLLNLALSDLGSICTTVPKAMHNSLWDTSNISYTGCAAQLFFFLFFISTEFYLLTIMCYDRYVSICKPLHYGTLLGSRACAHMAAAAWASGFLTALMHTANTFSLPLCHGNALGQFFCEIPQILKLSCSHSYIRELGLLAVSVCLNFGCFVFIVFSYVQIFRAVLRIPSEQGRHKAFSTCLPHLAVLSLFLSTGTFAYVKPPSMSSPSLDLVLSVPYSVVPPALNPLIYSLRNQELKAAVWRLMTGCFQKH
SIO_010081: LOC129132369
subclass of: SO_0000673
so part of: LOC129132369
location: 1675372..1676304
location: region:1675372-1676304:1
so has part: feature:1675372-1676304:1:exon

XP_054507417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1675372-1676304:1:exon

LOC129132382
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132382
note: 5.8S ribosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 1716338..1716475
location: region:1716338-1716475:1
so has part: feature:1716338-1716475:1:exon

129132382
type: Gene
SIO_000068: ncbigene

position:1716338:1
position: 1716338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1716475:1
position: 1716475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1716338-1716475:1:exon

LOC129132382
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132382
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC129132382
subclass of: SO_0000673
so part of: LOC129132382
location: 1716338..1716475
location: region:1716338-1716475:1
so has part: feature:1716338-1716475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1716338-1716475:1:exon

LOC129132364
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132364
note: olfactory receptor 14J1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1753859..>1754518)
location: region:1753859-1754518:-1
so has part: feature:1753859-1754518:-1:exon
subclass of: SO_0000010

129132364
type: Gene
SIO_000068: ncbigene

position:1753859:-1
position: 1753859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1754518:-1
position: 1754518
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1753859-1754518:-1:exon

LOC129132364
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132364
product: olfactory receptor 14J1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_054651438.1
SIO_010081: LOC129132364
subclass of: SO_0000673
so part of: LOC129132364
location: complement(1753859..>1754518)
location: region:1753859-1754518:-1
so has part: feature:1753859-1754518:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1753859-1754518:-1:exon

LOC129132364
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132364
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14J1-like
translation: YTGCATQVFFLIFFMGAEYFLLTTMCYDRYVSICKPLHYGTLLGSRACAHMAAAAWACAFLNALMHTANTFSLPLCKGNALSQFFCEVPQMLKLSCAKSYLRELGLLAVSVCLSSGCFVFIVFSYVQIFRAVLRIPSEQGRHKAFSTCLPHLAVVSLFLSTGTFYYLKPPSLFSPSLDLALSVLYSVVPPALNPLIYSLRNQELKAAVWRLMSGCFQER
SIO_010081: LOC129132364
subclass of: SO_0000673
so part of: LOC129132364
location: complement(1753859..>1754518)
location: region:1753859-1754518:-1
so has part: feature:1753859-1754518:-1:exon

XP_054507413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1753859-1754518:-1:exon

LOC129132365
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132365
note: olfactory receptor 14J1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1775689..1776588
location: region:1775689-1776588:1
so has part: feature:1775689-1776588:1:exon
subclass of: SO_0000010

129132365
type: Gene
SIO_000068: ncbigene

position:1775689:1
position: 1775689
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1776588:1
position: 1776588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1775689-1776588:1:exon

LOC129132365
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132365
product: olfactory receptor 14J1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_054651439.1
SIO_010081: LOC129132365
subclass of: SO_0000673
so part of: LOC129132365
location: join(<1775689..1775739,1775950..1776588)
location: region:1775689-1776588:1
so has part: feature:1775689-1775739:1:exon
so has part: feature:1775950-1776588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1775689-1775739:1:exon

position:1775739:1
position: 1775739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1775950-1776588:1:exon

position:1775950:1
position: 1775950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC129132365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132365
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14J1-like
translation: LLALADTRQLQLLHFCLLFFFLFFISTEYFLLTVMCYDRYVSICKPLHYGTLLGSRACAHMAAAAWASAFLNALMHTANTFSLPLCHGNALGHFLCDVPPILKLSCSHSNLRKIGLIVVSLCLSFGCFVFIVFSYVQIFRAVLRIPSEQGRHKAFSTCLPHPAVVSLFVSTASFAYVKPPSMSSPSLDLALSVLYSVVPPAPNPLIYSLRNQELKAAVWRLMTGWFWKH
SIO_010081: LOC129132365
subclass of: SO_0000673
so part of: LOC129132365
location: join(<1775689..1775739,1775950..1776588)
location: region:1775689-1776588:1
so has part: feature:1775689-1775739:1:exon
so has part: feature:1775950-1776588:1:exon

XP_054507414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1775689-1775739:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1775950-1776588:1:exon

LOC129132366
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132366
note: striated muscle-specific serine/threonine-protein kinase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1870523..1877604
location: region:1870523-1877604:1
so has part: feature:1870523-1877604:1:exon
subclass of: SO_0000010

129132366
type: Gene
SIO_000068: ncbigene

position:1870523:1
position: 1870523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1877604:1
position: 1877604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1870523-1877604:1:exon

LOC129132366
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132366
product: striated muscle-specific serine/threonine-protein kinase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_054651440.1
SIO_010081: LOC129132366
subclass of: SO_0000673
so part of: LOC129132366
location: join(1870523..1871385,1871689..1871839,1875129..1875722,1875843..1875893,1876098..1876464,1877079..1877255,1877498..1877604)
location: region:1870523-1877604:1
so has part: feature:1870523-1871385:1:exon
so has part: feature:1871689-1871839:1:exon
so has part: feature:1875129-1875722:1:exon
so has part: feature:1875843-1875893:1:exon
so has part: feature:1876098-1876464:1:exon
so has part: feature:1877079-1877255:1:exon
so has part: feature:1877498-1877604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1870523-1871385:1:exon

position:1871385:1
position: 1871385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1871689-1871839:1:exon

position:1871689:1
position: 1871689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871839:1
position: 1871839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1875129-1875722:1:exon

position:1875129:1
position: 1875129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1875722:1
position: 1875722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1875843-1875893:1:exon

position:1875843:1
position: 1875843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1875893:1
position: 1875893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1876098-1876464:1:exon

position:1876098:1
position: 1876098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1876464:1
position: 1876464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1877079-1877255:1:exon

position:1877079:1
position: 1877079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1877255:1
position: 1877255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1877498-1877604:1:exon

position:1877498:1
position: 1877498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC129132366
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: striated muscle-specific serine/threonine-protein kinase-like
translation: MSGPGVSVSTVATMLEEALYSRKGTISVIRVNSHDPVKGFYQIGNDKANAATKGVWTLKEACQLHESLHIGAKALAKRCGISTVDAKHVVATCPHCQKSPLWSSGVNPRGLKASEIWQTDFTQCQLLKPRAWLAVTVDTYSGMIVATQHLKTDSKATIQHWLTAMAWLGVPKQIKTDNGPNFISKVVQAFASKWNIALVHGIPYNSTGQAIVERANQTLKTKLEVLAKAEGFTNAIPPGDQARMLATALLALNQFPRGDKTNSPAQRHWATQALEEGPRVVIKNELGEGQASPDYYPHQPFRWVMQHLTGDKMLRDITTPNAPSFVLRVTDLFPGQPKGRAMPPARPRPRAGLPRARPRPSRRALASARLWPCWRWRCWAGISAWCGGGIAALRLRLARARPRPRREVPSRARPRPRPRPRPRSRLRLLPGPAEDTRGAAAPAASAAASPARAPPLGSAAAGPEPPGPGAGGDARPGPIGERSGAVAGPGPSADSRVSPAGKAQEALQERYRVGSLLGRGGFGSVCSGTRLSDGAPVAIKRVPRDRIRHWGELPDGSSAPLEIVLLAKVSRGCAAVIQLLEWLELPDSFVLVLERPERCQELSAFLAERGFLPEEEARALFRQVLEAVQHCTACGVLHRDIKPENILLDLASGQLKLIDFGCGAFLQDTAYTQFAGTLSYSPPEWIQHQRYHGEAATIWSLGLLLCHLVMGKHPFRRGQEIIRGRILFPRWLSQECQDIIKRCLSMQPSDRPSLEELFCHPWVQGVPLP
SIO_010081: LOC129132366
subclass of: SO_0000673
so part of: LOC129132366
location: join(1870523..1871385,1871689..1871839,1875129..1875722,1875843..1875893,1876098..1876464,1877079..1877255,1877498..1877604)
location: region:1870523-1877604:1
so has part: feature:1870523-1871385:1:exon
so has part: feature:1871689-1871839:1:exon
so has part: feature:1875129-1875722:1:exon
so has part: feature:1875843-1875893:1:exon
so has part: feature:1876098-1876464:1:exon
so has part: feature:1877079-1877255:1:exon
so has part: feature:1877498-1877604:1:exon

XP_054507415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1870523-1871385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1871689-1871839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1875129-1875722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1875843-1875893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1876098-1876464:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1877079-1877255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1877498-1877604:1:exon

LOC129132367
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132367
note: zinc finger protein 850-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2316252..2566554
location: region:2316252-2566554:1
so has part: feature:2316252-2566554:1:exon

129132367
type: Gene
SIO_000068: ncbigene

position:2316252:1
position: 2316252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2566554:1
position: 2566554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2316252-2566554:1:exon

LOC129132367
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132367
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
pseudo: true
SIO_010081: LOC129132367
subclass of: SO_0000673
so part of: LOC129132367
location: 2316252..2316323
location: region:2316252-2316323:1
so has part: feature:2316252-2316323:1:exon

position:2316323:1
position: 2316323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2316252-2316323:1:exon

LOC129132367
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132367
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
pseudo: true
SIO_010081: LOC129132367
subclass of: SO_0000673
so part of: LOC129132367
location: 2319018..2319114
location: region:2319018-2319114:1
so has part: feature:2319018-2319114:1:exon

position:2319018:1
position: 2319018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2319114:1
position: 2319114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2319018-2319114:1:exon

LOC129132367
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132367
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
pseudo: true
SIO_010081: LOC129132367
subclass of: SO_0000673
so part of: LOC129132367
location: 2321903..2322187
location: region:2321903-2322187:1
so has part: feature:2321903-2322187:1:exon

position:2321903:1
position: 2321903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2322187:1
position: 2322187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2321903-2322187:1:exon

LOC129132367
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132367
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
pseudo: true
SIO_010081: LOC129132367
subclass of: SO_0000673
so part of: LOC129132367
location: 2328069..2328491
location: region:2328069-2328491:1
so has part: feature:2328069-2328491:1:exon

position:2328069:1
position: 2328069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2328491:1
position: 2328491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2328069-2328491:1:exon

LOC129132367
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132367
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
pseudo: true
SIO_010081: LOC129132367
subclass of: SO_0000673
so part of: LOC129132367
location: 2338748..2339390
location: region:2338748-2339390:1
so has part: feature:2338748-2339390:1:exon

position:2338748:1
position: 2338748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2339390:1
position: 2339390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2338748-2339390:1:exon

LOC129132367
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132367
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
pseudo: true
SIO_010081: LOC129132367
subclass of: SO_0000673
so part of: LOC129132367
location: 2340625..2340628
location: region:2340625-2340628:1
so has part: feature:2340625-2340628:1:exon

position:2340625:1
position: 2340625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340628:1
position: 2340628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2340625-2340628:1:exon

LOC129132367
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132367
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
pseudo: true
SIO_010081: LOC129132367
subclass of: SO_0000673
so part of: LOC129132367
location: 2388339..2388502
location: region:2388339-2388502:1
so has part: feature:2388339-2388502:1:exon

position:2388339:1
position: 2388339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2388502:1
position: 2388502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2388339-2388502:1:exon

LOC129132367
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132367
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
pseudo: true
SIO_010081: LOC129132367
subclass of: SO_0000673
so part of: LOC129132367
location: 2399187..2399229
location: region:2399187-2399229:1
so has part: feature:2399187-2399229:1:exon

position:2399187:1
position: 2399187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2399229:1
position: 2399229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2399187-2399229:1:exon

LOC129132367
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132367
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
pseudo: true
SIO_010081: LOC129132367
subclass of: SO_0000673
so part of: LOC129132367
location: 2408303..2408798
location: region:2408303-2408798:1
so has part: feature:2408303-2408798:1:exon

position:2408303:1
position: 2408303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2408798:1
position: 2408798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2408303-2408798:1:exon

LOC129132367
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132367
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
pseudo: true
SIO_010081: LOC129132367
subclass of: SO_0000673
so part of: LOC129132367
location: 2437580..2438267
location: region:2437580-2438267:1
so has part: feature:2437580-2438267:1:exon

position:2437580:1
position: 2437580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438267:1
position: 2438267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2437580-2438267:1:exon

LOC129132378
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132378
note: olfactory receptor 14J1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2446503..2447435
location: region:2446503-2447435:1
so has part: feature:2446503-2447435:1:exon
subclass of: SO_0000010

129132378
type: Gene
SIO_000068: ncbigene

position:2446503:1
position: 2446503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2447435:1
position: 2447435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2446503-2447435:1:exon

LOC129132378
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132378
product: olfactory receptor 14J1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
transcript id: XM_054651451.1
SIO_010081: LOC129132378
subclass of: SO_0000673
so part of: LOC129132378
location: 2446503..2447435
location: region:2446503-2447435:1
so has part: feature:2446503-2447435:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2446503-2447435:1:exon

LOC129132378
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14J1-like
translation: MSNSSSIRHFLLLALADTQQLQLLHFCLLLGISLAALLGNGLIISAVACGHHLHTPMFFFLLNLALADLGSICTTVPKAMHNSLWDTSNISYTGCAAQLYFFVFFISAEYSLLTVMCYDRYVSICKPLHYGTLLGSRACAHMAAAAWASAFLNALMHTANTFSLPLCHGNALGQFFCEIPQILKLSCSKSQLRELGLLVVTANLSFGCFVFIVFSYVQIFRAVLRIPSEQGRRKAFSTCLPHLAVVSLFVSTIIFAHLKPPSISSPSLDLALSVLYSVVPPALNPIIYSLRNQELKASVCTLMTGCFHKH
SIO_010081: LOC129132378
subclass of: SO_0000673
so part of: LOC129132378
location: 2446503..2447435
location: region:2446503-2447435:1
so has part: feature:2446503-2447435:1:exon

XP_054507426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2446503-2447435:1:exon

LOC129132367
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132367
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
pseudo: true
SIO_010081: LOC129132367
subclass of: SO_0000673
so part of: LOC129132367
location: 2535413..2535983
location: region:2535413-2535983:1
so has part: feature:2535413-2535983:1:exon

position:2535413:1
position: 2535413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2535983:1
position: 2535983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2535413-2535983:1:exon

LOC129132379
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132379
note: uncharacterized LOC129132379; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2553245..2559944)
location: region:2553245-2559944:-1
so has part: feature:2553245-2559944:-1:exon
subclass of: SO_0000011

129132379
type: Gene
SIO_000068: ncbigene

position:2553245:-1
position: 2553245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2559944:-1
position: 2559944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2553245-2559944:-1:exon

LOC129132379
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 39638
nc RNA class: lncRNA
gene: LOC129132379
product: uncharacterized LOC129132379
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008535790.1
SIO_010081: LOC129132379
subclass of: SO_0000673
so part of: LOC129132379
location: complement(join(2553245..2553629,2559504..2559944))
location: region:2553245-2559944:-1
so has part: feature:2559504-2559944:-1:exon
so has part: feature:2553245-2553629:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2559504-2559944:-1:exon

position:2559504:-1
position: 2559504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2553245-2553629:-1:exon

position:2553629:-1
position: 2553629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC129132380
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132380
note: zinc finger protein 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2560153..2561061)
location: region:2560153-2561061:-1
so has part: feature:2560153-2561061:-1:exon
subclass of: SO_0000010

129132380
type: Gene
SIO_000068: ncbigene

position:2560153:-1
position: 2560153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2561061:-1
position: 2561061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2560153-2561061:-1:exon

LOC129132380
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132380
product: zinc finger protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_054651452.1
SIO_010081: LOC129132380
subclass of: SO_0000673
so part of: LOC129132380
location: complement(join(2560153..2560584,2561047..2561061))
location: region:2560153-2561061:-1
so has part: feature:2561047-2561061:-1:exon
so has part: feature:2560153-2560584:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2561047-2561061:-1:exon

position:2561047:-1
position: 2561047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2560153-2560584:-1:exon

position:2560584:-1
position: 2560584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC129132380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132380
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 3-like
translation: MKEEALHDGEKPNKCLACGKSFRKSSHLIRHQMIHTGEWAYKCGECGKGFSCSSDLIRHQRIHTGERPYECPKCGKRFWTSSDLLCHQRIHTEEWPFLCPDCGKGFKQNFTLVAHWRIHTGERPYECPQCGKSFTTSSHLTRHQRSHQ
SIO_010081: LOC129132380
subclass of: SO_0000673
so part of: LOC129132380
location: complement(join(2560153..2560584,2561047..2561061))
location: region:2560153-2561061:-1
so has part: feature:2561047-2561061:-1:exon
so has part: feature:2560153-2560584:-1:exon

XP_054507427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2561047-2561061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2560153-2560584:-1:exon

LOC129132367
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129132367
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
pseudo: true
SIO_010081: LOC129132367
subclass of: SO_0000673
so part of: LOC129132367
location: 2566076..2566554
location: region:2566076-2566554:1
so has part: feature:2566076-2566554:1:exon

position:2566076:1
position: 2566076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2566076-2566554:1:exon

LOC129132370
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129132370
note: olfactory receptor 14J1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2573067..2574023
location: region:2573067-2574023:1
so has part: feature:2573067-2574023:1:exon
subclass of: SO_0000010

129132370
type: Gene
SIO_000068: ncbigene

position:2573067:1
position: 2573067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2574023:1
position: 2574023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2573067-2574023:1:exon

LOC129132370
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129132370
product: olfactory receptor 14J1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 Proteins
transcript id: XM_054651443.1
SIO_010081: LOC129132370
subclass of: SO_0000673
so part of: LOC129132370
location: 2573067..2574023
location: region:2573067-2574023:1
so has part: feature:2573067-2574023:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2573067-2574023:1:exon

LOC129132370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129132370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14J1-like
translation: MSNSSSIRHFLLLALADTRQLQLLHFCLLLGISLAALLGNGLIISAVACGHHLHTPMFFFLLNLALSDLGSICTTVPKAMHNSLWDTSNISYTGCAAQLFFFLFFISTEYFLLTVMCYDRYVSICKPLHYGTLLGSRACAHMAAAAWASAFLYSLLHTANTFSLPLCHGNALGQFFCEIPQILKLSCSHSYLREHGLVAVSACLLFGCFVFMVFSYVQIFRVVLRIPSEQGRHKAFSTCLPHLVVVSLFLSSASFAHLKPPSISSPSLDLAVSVLYSVVPPALNPLIYSLRNQELKAAVRRLMTGCFQEH
SIO_010081: LOC129132370
subclass of: SO_0000673
so part of: LOC129132370
location: 2573091..2574023
location: region:2573091-2574023:1
so has part: feature:2573091-2574023:1:exon

XP_054507418.1
type: Protein
SIO_000068: ncbiprotein

position:2573091:1
position: 2573091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2573091-2574023:1:exon