Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 14, Agelaius phoeniceus 1.1, whole genome shotgun sequence.
type: Entry
definition: Agelaius phoeniceus isolate BioBank_ID:100140 chromosome 14, Agelaius phoeniceus 1.1, whole genome shotgun sequence.
sequence version: NC_071687.1
sequence date: 2023-03-25
sequence: sequence
division: CON
label: NC_071687.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA942290
dblink: SAMN19590559
keyword: WGS
keyword: RefSeq
source: Agelaius phoeniceus (red-winged blackbird)
organism: Agelaius phoeniceus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Icteridae; Agelaius.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM036727.1.\nAssembly name: Agelaius phoeniceus 1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Brood Parasitic Bird Genomes\nConsortium on 2022/12/05. The original whole-genome shotgun project\nhas the accession JAIWQD000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Brood Parasitic Bird Genomes Consortium\nAssembly Method :: HiFasm v. APR-2021\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 38.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_020745825.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/22/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 20764855
topology: linear
so has quality: SO_0000987
location: 1..20764855
location: region:1-20764855:1
RO_0002162: 39638

NC_071687
type: RefSeq
SIO_000068: refseq

PRJNA942290
type: BioProject
SIO_000068: bioproject

SAMN19590559
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20764855:1
position: 20764855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20764855:1:source
so part of: sequence
organism: Agelaius phoeniceus
mol type: genomic DNA
isolate: BioBank_ID:100140
specimen voucher: MCZ:Orn:364415
chromosome: 14
sex: female
tissue type: brain
dev stage: adult
country: USA: Hidalgo County, Texas
collection date: 2018-03-30
collected by: Kathleen Lynch

39638
type: Taxonomy
SIO_000068: taxonomy

LOC129126471
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129126471
note: uncharacterized LOC129126471; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(142203..150290)
location: region:142203-150290:-1
so has part: feature:142203-150290:-1:exon
subclass of: SO_0000011

129126471
type: Gene
SIO_000068: ncbigene

position:142203:-1
position: 142203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150290:-1
position: 150290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142203-150290:-1:exon

LOC129126471
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 39638
nc RNA class: lncRNA
gene: LOC129126471
product: uncharacterized LOC129126471, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008535069.1
SIO_010081: LOC129126471
subclass of: SO_0000673
so part of: LOC129126471
location: complement(join(142203..143502,146893..147014,147801..147876,148550..148613,149228..149292,149817..150290))
location: region:142203-150290:-1
so has part: feature:149817-150290:-1:exon
so has part: feature:149228-149292:-1:exon
so has part: feature:148550-148613:-1:exon
so has part: feature:147801-147876:-1:exon
so has part: feature:146893-147014:-1:exon
so has part: feature:142203-143502:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:149817-150290:-1:exon

position:149817:-1
position: 149817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:149228-149292:-1:exon

position:149228:-1
position: 149228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149292:-1
position: 149292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148550-148613:-1:exon

position:148550:-1
position: 148550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148613:-1
position: 148613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147801-147876:-1:exon

position:147801:-1
position: 147801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147876:-1
position: 147876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:146893-147014:-1:exon

position:146893:-1
position: 146893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147014:-1
position: 147014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:142203-143502:-1:exon

position:143502:-1
position: 143502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC129126471
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 39638
nc RNA class: lncRNA
gene: LOC129126471
product: uncharacterized LOC129126471, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008535068.1
SIO_010081: LOC129126471
subclass of: SO_0000673
so part of: LOC129126471
location: complement(join(142203..143502,146893..147014,147801..147876,148550..148613,149817..150287))
location: region:142203-150287:-1
so has part: feature:149817-150287:-1:exon
so has part: feature:148550-148613:-1:exon
so has part: feature:147801-147876:-1:exon
so has part: feature:146893-147014:-1:exon
so has part: feature:142203-143502:-1:exon

position:150287:-1
position: 150287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149817-150287:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148550-148613:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147801-147876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146893-147014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142203-143502:-1:exon

LOC129126469
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129126469
note: cyclin-A1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(142203..145430)
location: region:142203-145430:-1
so has part: feature:142203-145430:-1:exon

129126469
type: Gene
SIO_000068: ncbigene

position:145430:-1
position: 145430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142203-145430:-1:exon

LOC129126469
type: Exon
subclass of: SO_0000147
RO_0002162: 39638
gene: LOC129126469
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC129126469
subclass of: SO_0000673
so part of: LOC129126469
location: complement(142203..145430)
location: region:142203-145430:-1
so has part: feature:142203-145430:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142203-145430:-1:exon

KLF13
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: KLF13
note: KLF transcription factor 13; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 246700..275960
location: region:246700-275960:1
so has part: feature:246700-275960:1:exon
subclass of: SO_0000010

129126330
type: Gene
SIO_000068: ncbigene

position:246700:1
position: 246700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275960:1
position: 275960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246700-275960:1:exon

KLF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: KLF13
product: KLF transcription factor 13
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642207.1
SIO_010081: KLF13
subclass of: SO_0000673
so part of: KLF13
location: join(246700..247624,274346..275960)
location: region:246700-275960:1
so has part: feature:246700-247624:1:exon
so has part: feature:274346-275960:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246700-247624:1:exon

position:247624:1
position: 247624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274346-275960:1:exon

position:274346:1
position: 274346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: KLF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 13
translation: MATAAYVDHFAAECLVSMSSRAVIHSPKGEPDPQPDAAILPSSNGEDRREVRETGKDNGSSLLVVASILADLNQHVPNSPALRTEKTETLDITEQIHISIAPKEFGEESLSSAGKSGGERAATPTSLAAVNEPSPRQKNKRIRSWTDPGSPQKKHKCHYVGCEKVYGKSSHLKAHLRTHTGERPFECNWQGCNKKFARSDELARHYRTHTGEKKFSCPLCEKRFMRSDHLTKHARRHANFHPSMLKRRSGSGSRTGSVSDYSRSDASSPTISPASSP
SIO_010081: KLF13
subclass of: SO_0000673
so part of: KLF13
location: join(247084..247624,274346..274638)
location: region:247084-274638:1
so has part: feature:247084-247624:1:exon
so has part: feature:274346-274638:1:exon

XP_054498182.1
type: Protein
SIO_000068: ncbiprotein

position:247084:1
position: 247084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274638:1
position: 274638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247084-247624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274346-274638:1:exon

OTUD7A
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: OTUD7A
note: OTU deubiquitinase 7A; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(295049..330602)
location: region:295049-330602:-1
so has part: feature:295049-330602:-1:exon
subclass of: SO_0000010

129126282
type: Gene
SIO_000068: ncbigene

position:295049:-1
position: 295049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330602:-1
position: 330602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295049-330602:-1:exon

OTUD7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: OTUD7A
product: OTU deubiquitinase 7A, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642128.1
SIO_010081: OTUD7A
subclass of: SO_0000673
so part of: OTUD7A
location: complement(join(295049..296585,298377..298461,298712..298826,302986..303135,304638..304765,310503..310615,311340..311467,312840..312941,318000..318218,320094..320276,330473..330602))
location: region:295049-330602:-1
so has part: feature:330473-330602:-1:exon
so has part: feature:320094-320276:-1:exon
so has part: feature:318000-318218:-1:exon
so has part: feature:312840-312941:-1:exon
so has part: feature:311340-311467:-1:exon
so has part: feature:310503-310615:-1:exon
so has part: feature:304638-304765:-1:exon
so has part: feature:302986-303135:-1:exon
so has part: feature:298712-298826:-1:exon
so has part: feature:298377-298461:-1:exon
so has part: feature:295049-296585:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330473-330602:-1:exon

position:330473:-1
position: 330473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320094-320276:-1:exon

position:320094:-1
position: 320094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320276:-1
position: 320276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:318000-318218:-1:exon

position:318000:-1
position: 318000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318218:-1
position: 318218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:312840-312941:-1:exon

position:312840:-1
position: 312840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312941:-1
position: 312941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:311340-311467:-1:exon

position:311340:-1
position: 311340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311467:-1
position: 311467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:310503-310615:-1:exon

position:310503:-1
position: 310503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310615:-1
position: 310615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:304638-304765:-1:exon

position:304638:-1
position: 304638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304765:-1
position: 304765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:302986-303135:-1:exon

position:302986:-1
position: 302986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303135:-1
position: 303135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:298712-298826:-1:exon

position:298712:-1
position: 298712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298826:-1
position: 298826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:298377-298461:-1:exon

position:298377:-1
position: 298377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298461:-1
position: 298461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:295049-296585:-1:exon

position:296585:-1
position: 296585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OTUD7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: OTUD7A
product: OTU deubiquitinase 7A, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642127.1
SIO_010081: OTUD7A
subclass of: SO_0000673
so part of: OTUD7A
location: complement(join(295049..296588,298377..298461,298712..298826,302986..303135,304638..304765,310503..310615,311340..311467,312840..312941,318000..318218,320094..320276,330473..330602))
location: region:295049-330602:-1
so has part: feature:330473-330602:-1:exon
so has part: feature:320094-320276:-1:exon
so has part: feature:318000-318218:-1:exon
so has part: feature:312840-312941:-1:exon
so has part: feature:311340-311467:-1:exon
so has part: feature:310503-310615:-1:exon
so has part: feature:304638-304765:-1:exon
so has part: feature:302986-303135:-1:exon
so has part: feature:298712-298826:-1:exon
so has part: feature:298377-298461:-1:exon
so has part: feature:295049-296588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330473-330602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320094-320276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:318000-318218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312840-312941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311340-311467:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:310503-310615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304638-304765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:302986-303135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:298712-298826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:298377-298461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:295049-296588:-1:exon

position:296588:-1
position: 296588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OTUD7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: OTUD7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7A isoform X2
translation: MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAALNDYEQLRQVHTANLPQVFNEGRFYKQQEPEQPPQVTKAERPCLQRQDDIAQEKRLSRGISHASSAIVSLARSHVANDCSNEQFPLEMPIYTFQLPDLSVYSEDFRSFIERDLIEQATMVALEQAGRLNWWSTVCTSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRKALYTMMRSGAEREALKRRWRWQQTQQNKESGLVYTEEEWEREWNELLKLASSEPRTHFSKNGGTGGGVDNAEDPVYESLEEFHVFVLAHILRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVLPNRCHCSPLVLAYDQAHFSALVSMEQKDQQREQAVIPLTDSEHKLLPLHFAVDPGKDWEWGKDDNDNTRLANLILSLEAKLNLLHSYMNVTWIRIPSETRAPLAQPESPTASAGEDVQSLADSMDSDRDSICSNSNGNNGKNGKEKEKDKQRKDKDKTRTDSVANKIGSLSKTLGIKLKKNMGGLGGLVHGKMSRANSGNGKNGDTVEKVKEKKSKSRKGSKEESGQSASTSPSEKTTPSPTDRASSSPTEKANTKPFSDKQSDPWKYSTDVKLSLNILRAAMQGERKFIFAGLLLTSHRHQFHEEMIGYYLTSAQERFNAEQEQKRKEAEKKAALNGSSSRKLEPEAFSKEKLEPSPQDRASPVLPQSHTTQLVLKFKDRTSPTPGSFSSPSNGAKRSGPIPVSAHYSHTPPVQRQSVIHLHDVNSKPSSFQDDTYKPVVGTLKTCATYPQQNRSLSSQSYSPARLPGMRTVNTVESLSYARPAEHKSQTYTNGFNTGDIRDCLEYADEDAPQSWLNNDKNQGRSTVCPIYSIQQNRCKKENCSFYGRPETENYCSYCYKEELKRRERDSKGHRH
SIO_010081: OTUD7A
subclass of: SO_0000673
so part of: OTUD7A
location: complement(join(295155..296585,298377..298461,298712..298826,302986..303135,304638..304765,310503..310615,311340..311467,312840..312941,318000..318218,320094..320276,330473..330557))
location: region:295155-330557:-1
so has part: feature:330473-330557:-1:exon
so has part: feature:320094-320276:-1:exon
so has part: feature:318000-318218:-1:exon
so has part: feature:312840-312941:-1:exon
so has part: feature:311340-311467:-1:exon
so has part: feature:310503-310615:-1:exon
so has part: feature:304638-304765:-1:exon
so has part: feature:302986-303135:-1:exon
so has part: feature:298712-298826:-1:exon
so has part: feature:298377-298461:-1:exon
so has part: feature:295155-296585:-1:exon

XP_054498103.1
type: Protein
SIO_000068: ncbiprotein

position:295155:-1
position: 295155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330557:-1
position: 330557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330473-330557:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320094-320276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:318000-318218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312840-312941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311340-311467:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:310503-310615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304638-304765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:302986-303135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:298712-298826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:298377-298461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:295155-296585:-1:exon

OTUD7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: OTUD7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7A isoform X1
translation: MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAALNDYEQLRQVHTANLPQVFNEGRFYKQQEPEQPPQVTKAERPCLQRQDDIAQEKRLSRGISHASSAIVSLARSHVANDCSNEQFPLEMPIYTFQLPDLSVYSEDFRSFIERDLIEQATMVALEQAGRLNWWSTVCTSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRKALYTMMRSGAEREALKRRWRWQQTQQNKESGLVYTEEEWEREWNELLKLASSEPRTHFSKNGGTGGGVDNAEDPVYESLEEFHVFVLAHILRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVLPNRCHCSPLVLAYDQAHFSALVSMEQKDQQREQAVIPLTDSEHKLLPLHFAVDPGKDWEWGKDDNDNTRLANLILSLEAKLNLLHSYMNVTWIRIPSETRQAPLAQPESPTASAGEDVQSLADSMDSDRDSICSNSNGNNGKNGKEKEKDKQRKDKDKTRTDSVANKIGSLSKTLGIKLKKNMGGLGGLVHGKMSRANSGNGKNGDTVEKVKEKKSKSRKGSKEESGQSASTSPSEKTTPSPTDRASSSPTEKANTKPFSDKQSDPWKYSTDVKLSLNILRAAMQGERKFIFAGLLLTSHRHQFHEEMIGYYLTSAQERFNAEQEQKRKEAEKKAALNGSSSRKLEPEAFSKEKLEPSPQDRASPVLPQSHTTQLVLKFKDRTSPTPGSFSSPSNGAKRSGPIPVSAHYSHTPPVQRQSVIHLHDVNSKPSSFQDDTYKPVVGTLKTCATYPQQNRSLSSQSYSPARLPGMRTVNTVESLSYARPAEHKSQTYTNGFNTGDIRDCLEYADEDAPQSWLNNDKNQGRSTVCPIYSIQQNRCKKENCSFYGRPETENYCSYCYKEELKRRERDSKGHRH
SIO_010081: OTUD7A
subclass of: SO_0000673
so part of: OTUD7A
location: complement(join(295155..296588,298377..298461,298712..298826,302986..303135,304638..304765,310503..310615,311340..311467,312840..312941,318000..318218,320094..320276,330473..330557))
location: region:295155-330557:-1
so has part: feature:330473-330557:-1:exon
so has part: feature:320094-320276:-1:exon
so has part: feature:318000-318218:-1:exon
so has part: feature:312840-312941:-1:exon
so has part: feature:311340-311467:-1:exon
so has part: feature:310503-310615:-1:exon
so has part: feature:304638-304765:-1:exon
so has part: feature:302986-303135:-1:exon
so has part: feature:298712-298826:-1:exon
so has part: feature:298377-298461:-1:exon
so has part: feature:295155-296588:-1:exon

XP_054498102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330473-330557:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320094-320276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:318000-318218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312840-312941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311340-311467:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:310503-310615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304638-304765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:302986-303135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:298712-298826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:298377-298461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:295155-296588:-1:exon

LOC129126434
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129126434
note: uncharacterized LOC129126434; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(352713..394187)
location: region:352713-394187:-1
so has part: feature:352713-394187:-1:exon
subclass of: SO_0000011

129126434
type: Gene
SIO_000068: ncbigene

position:352713:-1
position: 352713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394187:-1
position: 394187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352713-394187:-1:exon

LOC129126434
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 39638
nc RNA class: lncRNA
gene: LOC129126434
product: uncharacterized LOC129126434
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008535067.1
SIO_010081: LOC129126434
subclass of: SO_0000673
so part of: LOC129126434
location: complement(join(352713..352907,353466..353583,358499..358571,394087..394187))
location: region:352713-394187:-1
so has part: feature:394087-394187:-1:exon
so has part: feature:358499-358571:-1:exon
so has part: feature:353466-353583:-1:exon
so has part: feature:352713-352907:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:394087-394187:-1:exon

position:394087:-1
position: 394087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358499-358571:-1:exon

position:358499:-1
position: 358499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358571:-1
position: 358571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:353466-353583:-1:exon

position:353466:-1
position: 353466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353583:-1
position: 353583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:352713-352907:-1:exon

position:352907:-1
position: 352907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GCNT3
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: GCNT3
note: glucosaminyl (N-acetyl) transferase 3, mucin type; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 427129..428406
location: region:427129-428406:1
so has part: feature:427129-428406:1:exon
subclass of: SO_0000010

129126342
type: Gene
SIO_000068: ncbigene

position:427129:1
position: 427129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428406:1
position: 428406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427129-428406:1:exon

GCNT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: GCNT3
product: glucosaminyl (N-acetyl) transferase 3, mucin type
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins
transcript id: XM_054642219.1
SIO_010081: GCNT3
subclass of: SO_0000673
so part of: GCNT3
location: 427129..428406
location: region:427129-428406:1
so has part: feature:427129-428406:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:427129-428406:1:exon

GCNT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: GCNT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3
translation: MPWWQRAPAARRRWALLLGPLALLAAALALRGTARPGPADHPRLYRALELSPSRSINCSGVVRGDQTAIQEAQLYNLEVANRRASPTPGEYLNITRDCRAFKETRRYIEFPLSQEEEEFPIAYSMIIHHKIDMFERLLRSVYAPQNVYCVHVDSKSPAAFQEAVRAIAACFPNVFVASRLESVVYASWSRVQADLNCMQDLLQSPVPWRYLINTCGTDFPIKTNAEIVRALQLLQGQNTMESERPSAAKKQRWEYHHEVGETISRTSQKKLPPPHSYPIFTGSAYNAVTRDFVRYIFENPTAQKFLEWSKDSYSPDEYVWATLNRMPGVPGGTPLSDKFQLSDMNALPRLVKWEYLEGDMSKGAPYPPCTGRHQRSVCIYGVGDVPWMLQQHHLLANKFDPEVDDAAVQCLEEYLRHKALYGRGL
SIO_010081: GCNT3
subclass of: SO_0000673
so part of: GCNT3
location: 427129..428406
location: region:427129-428406:1
so has part: feature:427129-428406:1:exon

XP_054498194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427129-428406:1:exon

BNIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: BNIP2
note: BCL2 interacting protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(433484..456841)
location: region:433484-456841:-1
so has part: feature:433484-456841:-1:exon
subclass of: SO_0000010

129126485
type: Gene
SIO_000068: ncbigene

position:433484:-1
position: 433484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456841:-1
position: 456841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433484-456841:-1:exon

BNIP2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 39638
gene: BNIP2
product: BCL2 interacting protein 2, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008535072.1
SIO_010081: BNIP2
so part of: BNIP2
location: complement(join(433484..433792,442596..442723,444624..444659,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451863,452363..452500,453562..453784,455088..455219,456340..456621))
location: region:433484-456621:-1
so has part: feature:456340-456621:-1:exon
so has part: feature:455088-455219:-1:exon
so has part: feature:453562-453784:-1:exon
so has part: feature:452363-452500:-1:exon
so has part: feature:451733-451863:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:444624-444659:-1:exon
so has part: feature:442596-442723:-1:exon
so has part: feature:433484-433792:-1:exon

position:456621:-1
position: 456621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456340-456621:-1:exon

position:456340:-1
position: 456340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:455088-455219:-1:exon

position:455088:-1
position: 455088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455219:-1
position: 455219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:453562-453784:-1:exon

position:453562:-1
position: 453562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453784:-1
position: 453784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:452363-452500:-1:exon

position:452363:-1
position: 452363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452500:-1
position: 452500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:451733-451863:-1:exon

position:451733:-1
position: 451733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451863:-1
position: 451863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:450959-451026:-1:exon

position:450959:-1
position: 450959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451026:-1
position: 451026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:450000-450173:-1:exon

position:450000:-1
position: 450000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450173:-1
position: 450173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:448013-448189:-1:exon

position:448013:-1
position: 448013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448189:-1
position: 448189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:447266-447368:-1:exon

position:447266:-1
position: 447266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447368:-1
position: 447368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:447017-447148:-1:exon

position:447017:-1
position: 447017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447148:-1
position: 447148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:446286-446372:-1:exon

position:446286:-1
position: 446286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446372:-1
position: 446372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:446056-446154:-1:exon

position:446056:-1
position: 446056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446154:-1
position: 446154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:444624-444659:-1:exon

position:444624:-1
position: 444624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444659:-1
position: 444659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:442596-442723:-1:exon

position:442596:-1
position: 442596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442723:-1
position: 442723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:433484-433792:-1:exon

position:433792:-1
position: 433792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTF2A2
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: GTF2A2
note: general transcription factor IIA subunit 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(433484..442667)
location: region:433484-442667:-1
so has part: feature:433484-442667:-1:exon
subclass of: SO_0000010

129126487
type: Gene
SIO_000068: ncbigene

position:442667:-1
position: 442667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433484-442667:-1:exon

GTF2A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: GTF2A2
product: general transcription factor IIA subunit 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642417.1
SIO_010081: GTF2A2
subclass of: SO_0000673
so part of: GTF2A2
location: complement(join(433484..433792,435450..435576,436877..436981,437460..437593,442596..442667))
location: region:433484-442667:-1
so has part: feature:442596-442667:-1:exon
so has part: feature:437460-437593:-1:exon
so has part: feature:436877-436981:-1:exon
so has part: feature:435450-435576:-1:exon
so has part: feature:433484-433792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442596-442667:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437460-437593:-1:exon

position:437460:-1
position: 437460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437593:-1
position: 437593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:436877-436981:-1:exon

position:436877:-1
position: 436877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436981:-1
position: 436981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:435450-435576:-1:exon

position:435450:-1
position: 435450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435576:-1
position: 435576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:433484-433792:-1:exon

GTF2A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: GTF2A2
product: general transcription factor IIA subunit 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642418.1
SIO_010081: GTF2A2
subclass of: SO_0000673
so part of: GTF2A2
location: complement(join(433484..433792,435450..435576,436877..436981,437460..437593,437891..437926))
location: region:433484-437926:-1
so has part: feature:437891-437926:-1:exon
so has part: feature:437460-437593:-1:exon
so has part: feature:436877-436981:-1:exon
so has part: feature:435450-435576:-1:exon
so has part: feature:433484-433792:-1:exon

position:437926:-1
position: 437926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437891-437926:-1:exon

position:437891:-1
position: 437891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437460-437593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436877-436981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:435450-435576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433484-433792:-1:exon

GTF2A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: GTF2A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor IIA subunit 2
translation: MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELVKVDKVKIVACDGKNTGSNTAE
SIO_010081: GTF2A2
subclass of: SO_0000673
so part of: GTF2A2
location: complement(join(433767..433792,435450..435576,436877..436981,437460..437531))
location: region:433767-437531:-1
so has part: feature:437460-437531:-1:exon
so has part: feature:436877-436981:-1:exon
so has part: feature:435450-435576:-1:exon
so has part: feature:433767-433792:-1:exon

XP_054498392.1
type: Protein
SIO_000068: ncbiprotein

position:433767:-1
position: 433767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437531:-1
position: 437531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437460-437531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436877-436981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435450-435576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433767-433792:-1:exon

GTF2A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: GTF2A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor IIA subunit 2
translation: MAYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTELVKVDKVKIVACDGKNTGSNTAE
SIO_010081: GTF2A2
subclass of: SO_0000673
so part of: GTF2A2
location: complement(join(433767..433792,435450..435576,436877..436981,437460..437531))
location: region:433767-437531:-1
so has part: feature:437460-437531:-1:exon
so has part: feature:436877-436981:-1:exon
so has part: feature:435450-435576:-1:exon
so has part: feature:433767-433792:-1:exon

XP_054498393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437460-437531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436877-436981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435450-435576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433767-433792:-1:exon

LOC129126488
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129126488
note: uncharacterized LOC129126488; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 437967..439791
location: region:437967-439791:1
so has part: feature:437967-439791:1:exon
subclass of: SO_0000011

129126488
type: Gene
SIO_000068: ncbigene

position:437967:1
position: 437967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439791:1
position: 439791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437967-439791:1:exon

LOC129126488
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 39638
nc RNA class: lncRNA
gene: LOC129126488
product: uncharacterized LOC129126488
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008535073.1
SIO_010081: LOC129126488
subclass of: SO_0000673
so part of: LOC129126488
location: join(437967..438136,439372..439791)
location: region:437967-439791:1
so has part: feature:437967-438136:1:exon
so has part: feature:439372-439791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:437967-438136:1:exon

position:438136:1
position: 438136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:439372-439791:1:exon

position:439372:1
position: 439372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BNIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: BNIP2
product: BCL2 interacting protein 2, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642412.1
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(440223..442723,444624..444659,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451863,452363..452500,456763..456841))
location: region:440223-456841:-1
so has part: feature:456763-456841:-1:exon
so has part: feature:452363-452500:-1:exon
so has part: feature:451733-451863:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:444624-444659:-1:exon
so has part: feature:440223-442723:-1:exon

position:440223:-1
position: 440223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456763-456841:-1:exon

position:456763:-1
position: 456763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:452363-452500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451733-451863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:444624-444659:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440223-442723:-1:exon

BNIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: BNIP2
product: BCL2 interacting protein 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642409.1
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(440223..442723,444624..444659,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451863,452363..452500,453562..453784,455088..455219,456763..456835))
location: region:440223-456835:-1
so has part: feature:456763-456835:-1:exon
so has part: feature:455088-455219:-1:exon
so has part: feature:453562-453784:-1:exon
so has part: feature:452363-452500:-1:exon
so has part: feature:451733-451863:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:444624-444659:-1:exon
so has part: feature:440223-442723:-1:exon

position:456835:-1
position: 456835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456763-456835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455088-455219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453562-453784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452363-452500:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451733-451863:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444624-444659:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440223-442723:-1:exon

BNIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: BNIP2
product: BCL2 interacting protein 2, transcript variant X10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642415.1
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(440223..442723,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451863,452363..452500,453562..453784,455088..455219,456340..456622))
location: region:440223-456622:-1
so has part: feature:456340-456622:-1:exon
so has part: feature:455088-455219:-1:exon
so has part: feature:453562-453784:-1:exon
so has part: feature:452363-452500:-1:exon
so has part: feature:451733-451863:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:440223-442723:-1:exon

position:456622:-1
position: 456622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456340-456622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455088-455219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453562-453784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452363-452500:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451733-451863:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440223-442723:-1:exon

BNIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: BNIP2
product: BCL2 interacting protein 2, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642411.1
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(440223..442723,444624..444659,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451863,452363..452500,456340..456621))
location: region:440223-456621:-1
so has part: feature:456340-456621:-1:exon
so has part: feature:452363-452500:-1:exon
so has part: feature:451733-451863:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:444624-444659:-1:exon
so has part: feature:440223-442723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:456340-456621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:452363-452500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451733-451863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:444624-444659:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440223-442723:-1:exon

BNIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: BNIP2
product: BCL2 interacting protein 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642410.1
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(440223..442723,444624..444659,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451863,452363..452500,453562..453784,456340..456621))
location: region:440223-456621:-1
so has part: feature:456340-456621:-1:exon
so has part: feature:453562-453784:-1:exon
so has part: feature:452363-452500:-1:exon
so has part: feature:451733-451863:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:444624-444659:-1:exon
so has part: feature:440223-442723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:456340-456621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453562-453784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:452363-452500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451733-451863:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:444624-444659:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440223-442723:-1:exon

BNIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: BNIP2
product: BCL2 interacting protein 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642408.1
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(440223..442723,444624..444659,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451863,452363..452500,455088..455219,456340..456621))
location: region:440223-456621:-1
so has part: feature:456340-456621:-1:exon
so has part: feature:455088-455219:-1:exon
so has part: feature:452363-452500:-1:exon
so has part: feature:451733-451863:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:444624-444659:-1:exon
so has part: feature:440223-442723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:456340-456621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455088-455219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:452363-452500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451733-451863:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:444624-444659:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440223-442723:-1:exon

BNIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: BNIP2
product: BCL2 interacting protein 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642407.1
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(440223..442723,444624..444659,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451863,452363..452500,453562..453784,455088..455219,456340..456621))
location: region:440223-456621:-1
so has part: feature:456340-456621:-1:exon
so has part: feature:455088-455219:-1:exon
so has part: feature:453562-453784:-1:exon
so has part: feature:452363-452500:-1:exon
so has part: feature:451733-451863:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:444624-444659:-1:exon
so has part: feature:440223-442723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:456340-456621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455088-455219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453562-453784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452363-452500:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451733-451863:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444624-444659:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440223-442723:-1:exon

BNIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: BNIP2
product: BCL2 interacting protein 2, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642414.1
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(440223..442723,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451863,452363..452500,453562..453784,455088..455219,456340..456619))
location: region:440223-456619:-1
so has part: feature:456340-456619:-1:exon
so has part: feature:455088-455219:-1:exon
so has part: feature:453562-453784:-1:exon
so has part: feature:452363-452500:-1:exon
so has part: feature:451733-451863:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:440223-442723:-1:exon

position:456619:-1
position: 456619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456340-456619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455088-455219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:453562-453784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452363-452500:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451733-451863:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440223-442723:-1:exon

BNIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: BNIP2
product: BCL2 interacting protein 2, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642413.1
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(440223..442723,444624..444659,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451863,452363..452500,453092..453527))
location: region:440223-453527:-1
so has part: feature:453092-453527:-1:exon
so has part: feature:452363-452500:-1:exon
so has part: feature:451733-451863:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:444624-444659:-1:exon
so has part: feature:440223-442723:-1:exon

position:453527:-1
position: 453527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453092-453527:-1:exon

position:453092:-1
position: 453092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:452363-452500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451733-451863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:444624-444659:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440223-442723:-1:exon

BNIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: BNIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X3
translation: MEGVEFKEEWQDEDFPRPLPEDDPVESDALAAAGTENEADTEGNGTKLRKKLMAPDISLNLDPSEESVFSDDLDESGEIDLDDLDTPSENSNEFEWEDDLPKPKTTDVIRKGSLAEYTVAEEKDDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGTLELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAITKPFIRVDQELNGKQEQKSEQ
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(442675..442723,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451782))
location: region:442675-451782:-1
so has part: feature:451733-451782:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:442675-442723:-1:exon

XP_054498390.1
type: Protein
SIO_000068: ncbiprotein

position:442675:-1
position: 442675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451782:-1
position: 451782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451733-451782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:442675-442723:-1:exon

BNIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: BNIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X2
translation: MEGVEFKEEWQDEDFPRPLPEDDPVESDALAAAGTENEADTEGNGTKLRKKLMAPDISLNLDPSEESVFSDDLDESGEIDLDDLDTPSENSNEFEWEDDLPKPKTTDVIRKGSLAEYTVAEEKDDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGTLELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAITKPFISSKFSQKIRYVFTLAELAELIPMEYVGIPECIKQVDQELNGKQEQKSEQ
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(442675..442723,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451782))
location: region:442675-451782:-1
so has part: feature:451733-451782:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:442675-442723:-1:exon

XP_054498389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451733-451782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:442675-442723:-1:exon

BNIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: BNIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X1
translation: MEGVEFKEEWQDEDFPRPLPEDDPVESDALAAAGTENEADTEGNGTKLRKKLMAPDISLNLDPSEESVFSDDLDESGEIDLDDLDTPSENSNEFEWEDDLPKPKTTDVIRKGSLAEYTVAEEKDDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGTLELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAITKPFISSKFSQKIRYVFTLAELAELIPMEYVGIPECIKQYEEEKFRKKQKRVDQELNGKQEQKSEQ
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(442675..442723,444624..444659,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451782))
location: region:442675-451782:-1
so has part: feature:451733-451782:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:444624-444659:-1:exon
so has part: feature:442675-442723:-1:exon

XP_054498382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451733-451782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:444624-444659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:442675-442723:-1:exon

BNIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: BNIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X1
translation: MEGVEFKEEWQDEDFPRPLPEDDPVESDALAAAGTENEADTEGNGTKLRKKLMAPDISLNLDPSEESVFSDDLDESGEIDLDDLDTPSENSNEFEWEDDLPKPKTTDVIRKGSLAEYTVAEEKDDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGTLELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAITKPFISSKFSQKIRYVFTLAELAELIPMEYVGIPECIKQYEEEKFRKKQKRVDQELNGKQEQKSEQ
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(442675..442723,444624..444659,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451782))
location: region:442675-451782:-1
so has part: feature:451733-451782:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:444624-444659:-1:exon
so has part: feature:442675-442723:-1:exon

XP_054498383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451733-451782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:444624-444659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:442675-442723:-1:exon

BNIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: BNIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X1
translation: MEGVEFKEEWQDEDFPRPLPEDDPVESDALAAAGTENEADTEGNGTKLRKKLMAPDISLNLDPSEESVFSDDLDESGEIDLDDLDTPSENSNEFEWEDDLPKPKTTDVIRKGSLAEYTVAEEKDDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGTLELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAITKPFISSKFSQKIRYVFTLAELAELIPMEYVGIPECIKQYEEEKFRKKQKRVDQELNGKQEQKSEQ
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(442675..442723,444624..444659,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451782))
location: region:442675-451782:-1
so has part: feature:451733-451782:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:444624-444659:-1:exon
so has part: feature:442675-442723:-1:exon

XP_054498384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451733-451782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:444624-444659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:442675-442723:-1:exon

BNIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: BNIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X1
translation: MEGVEFKEEWQDEDFPRPLPEDDPVESDALAAAGTENEADTEGNGTKLRKKLMAPDISLNLDPSEESVFSDDLDESGEIDLDDLDTPSENSNEFEWEDDLPKPKTTDVIRKGSLAEYTVAEEKDDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGTLELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAITKPFISSKFSQKIRYVFTLAELAELIPMEYVGIPECIKQYEEEKFRKKQKRVDQELNGKQEQKSEQ
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(442675..442723,444624..444659,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451782))
location: region:442675-451782:-1
so has part: feature:451733-451782:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:444624-444659:-1:exon
so has part: feature:442675-442723:-1:exon

XP_054498385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451733-451782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:444624-444659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:442675-442723:-1:exon

BNIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: BNIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X1
translation: MEGVEFKEEWQDEDFPRPLPEDDPVESDALAAAGTENEADTEGNGTKLRKKLMAPDISLNLDPSEESVFSDDLDESGEIDLDDLDTPSENSNEFEWEDDLPKPKTTDVIRKGSLAEYTVAEEKDDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGTLELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAITKPFISSKFSQKIRYVFTLAELAELIPMEYVGIPECIKQYEEEKFRKKQKRVDQELNGKQEQKSEQ
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(442675..442723,444624..444659,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451782))
location: region:442675-451782:-1
so has part: feature:451733-451782:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:444624-444659:-1:exon
so has part: feature:442675-442723:-1:exon

XP_054498386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451733-451782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:444624-444659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:442675-442723:-1:exon

BNIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: BNIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X1
translation: MEGVEFKEEWQDEDFPRPLPEDDPVESDALAAAGTENEADTEGNGTKLRKKLMAPDISLNLDPSEESVFSDDLDESGEIDLDDLDTPSENSNEFEWEDDLPKPKTTDVIRKGSLAEYTVAEEKDDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGTLELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAITKPFISSKFSQKIRYVFTLAELAELIPMEYVGIPECIKQYEEEKFRKKQKRVDQELNGKQEQKSEQ
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(442675..442723,444624..444659,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451782))
location: region:442675-451782:-1
so has part: feature:451733-451782:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:444624-444659:-1:exon
so has part: feature:442675-442723:-1:exon

XP_054498387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451733-451782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:444624-444659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:442675-442723:-1:exon

BNIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: BNIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X1
translation: MEGVEFKEEWQDEDFPRPLPEDDPVESDALAAAGTENEADTEGNGTKLRKKLMAPDISLNLDPSEESVFSDDLDESGEIDLDDLDTPSENSNEFEWEDDLPKPKTTDVIRKGSLAEYTVAEEKDDGRRWRMFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGTLELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAITKPFISSKFSQKIRYVFTLAELAELIPMEYVGIPECIKQYEEEKFRKKQKRVDQELNGKQEQKSEQ
SIO_010081: BNIP2
subclass of: SO_0000673
so part of: BNIP2
location: complement(join(442675..442723,444624..444659,446056..446154,446286..446372,447017..447148,447266..447368,448013..448189,450000..450173,450959..451026,451733..451782))
location: region:442675-451782:-1
so has part: feature:451733-451782:-1:exon
so has part: feature:450959-451026:-1:exon
so has part: feature:450000-450173:-1:exon
so has part: feature:448013-448189:-1:exon
so has part: feature:447266-447368:-1:exon
so has part: feature:447017-447148:-1:exon
so has part: feature:446286-446372:-1:exon
so has part: feature:446056-446154:-1:exon
so has part: feature:444624-444659:-1:exon
so has part: feature:442675-442723:-1:exon

XP_054498388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:451733-451782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450959-451026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450000-450173:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448013-448189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447266-447368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447017-447148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446286-446372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446056-446154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:444624-444659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:442675-442723:-1:exon

FOXB1
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: FOXB1
note: forkhead box B1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 567159..568121
location: region:567159-568121:1
so has part: feature:567159-568121:1:exon
subclass of: SO_0000010

129126405
type: Gene
SIO_000068: ncbigene

position:567159:1
position: 567159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568121:1
position: 568121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567159-568121:1:exon

FOXB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: FOXB1
product: forkhead box B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
transcript id: XM_054642315.1
SIO_010081: FOXB1
subclass of: SO_0000673
so part of: FOXB1
location: 567159..568121
location: region:567159-568121:1
so has part: feature:567159-568121:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:567159-568121:1:exon

FOXB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: FOXB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein B1
translation: MPRPGRNTYSDQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVVKSDHLAPSKPADAAQYLQQQAKLRLSALAATGTHLPQMSTYNLGVSQPSSFKHPFAIENIIAREYKMPGGLAFSTMQPMPAAYPLPNQLTTVGSSIGTGWPHMYSSGMIDTATPISMASSEYGAYGVPIKPLCHGGQTLPAIPVPIKPTPAAVPALPALPAPIPTILSNSPPSLSPTSSQTATSQSSPATPSETLTSPAPALHSVAVH
SIO_010081: FOXB1
subclass of: SO_0000673
so part of: FOXB1
location: 567159..568121
location: region:567159-568121:1
so has part: feature:567159-568121:1:exon

XP_054498290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567159-568121:1:exon

ANXA2
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: ANXA2
note: annexin A2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(708398..733463)
location: region:708398-733463:-1
so has part: feature:708398-733463:-1:exon
subclass of: SO_0000010

129126182
type: Gene
SIO_000068: ncbigene

position:708398:-1
position: 708398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733463:-1
position: 733463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708398-733463:-1:exon

ANXA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: ANXA2
product: annexin A2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641993.1
SIO_010081: ANXA2
subclass of: SO_0000673
so part of: ANXA2
location: complement(join(708398..708772,709680..709802,710443..710501,711488..711583,712306..712399,712996..713055,713376..713455,713908..713998,715929..716042,718799..718893,724467..724566,728785..728844,733440..733463))
location: region:708398-733463:-1
so has part: feature:733440-733463:-1:exon
so has part: feature:728785-728844:-1:exon
so has part: feature:724467-724566:-1:exon
so has part: feature:718799-718893:-1:exon
so has part: feature:715929-716042:-1:exon
so has part: feature:713908-713998:-1:exon
so has part: feature:713376-713455:-1:exon
so has part: feature:712996-713055:-1:exon
so has part: feature:712306-712399:-1:exon
so has part: feature:711488-711583:-1:exon
so has part: feature:710443-710501:-1:exon
so has part: feature:709680-709802:-1:exon
so has part: feature:708398-708772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:733440-733463:-1:exon

position:733440:-1
position: 733440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:728785-728844:-1:exon

position:728785:-1
position: 728785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728844:-1
position: 728844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:724467-724566:-1:exon

position:724467:-1
position: 724467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724566:-1
position: 724566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:718799-718893:-1:exon

position:718799:-1
position: 718799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718893:-1
position: 718893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:715929-716042:-1:exon

position:715929:-1
position: 715929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716042:-1
position: 716042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:713908-713998:-1:exon

position:713908:-1
position: 713908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713998:-1
position: 713998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:713376-713455:-1:exon

position:713376:-1
position: 713376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713455:-1
position: 713455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:712996-713055:-1:exon

position:712996:-1
position: 712996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713055:-1
position: 713055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:712306-712399:-1:exon

position:712306:-1
position: 712306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712399:-1
position: 712399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:711488-711583:-1:exon

position:711488:-1
position: 711488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711583:-1
position: 711583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:710443-710501:-1:exon

position:710443:-1
position: 710443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710501:-1
position: 710501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:709680-709802:-1:exon

position:709680:-1
position: 709680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709802:-1
position: 709802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:708398-708772:-1:exon

position:708772:-1
position: 708772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANXA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ANXA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A2
translation: MSTVHEILSKLSLEGDHSLPPSAYATVKAYSNFDADRDAAALETAIKTKGVDEVTIINILTNRSNEQRQDIAFAYQRRTKKELSAALKSALSGHLEAVILGLLKTPAQYDASELKAAMKGLGTDEDTLIEIICSRTNQELSEINRVYREMYKTELEKDIISDTSGDFRKLMVALAKGKRCEDTSVIDYELIDQDARDLYDAGVKRKGTDVPKWINIMTERSVPHLQKVFERYKSYSPYDMLESIKKEVKGDLENAFLNLVQCIQNKQLYFADRLYDSMKGKGTRDKVLIRIMVSRCEVDMLKIKSEFKRKYGKSLYYFIQQDTKGDYQRALLNLCGGED
SIO_010081: ANXA2
subclass of: SO_0000673
so part of: ANXA2
location: complement(join(708713..708772,709680..709802,710443..710501,711488..711583,712306..712399,712996..713055,713376..713455,713908..713998,715929..716042,718799..718893,724467..724566,728785..728832))
location: region:708713-728832:-1
so has part: feature:728785-728832:-1:exon
so has part: feature:724467-724566:-1:exon
so has part: feature:718799-718893:-1:exon
so has part: feature:715929-716042:-1:exon
so has part: feature:713908-713998:-1:exon
so has part: feature:713376-713455:-1:exon
so has part: feature:712996-713055:-1:exon
so has part: feature:712306-712399:-1:exon
so has part: feature:711488-711583:-1:exon
so has part: feature:710443-710501:-1:exon
so has part: feature:709680-709802:-1:exon
so has part: feature:708713-708772:-1:exon

XP_054497968.1
type: Protein
SIO_000068: ncbiprotein

position:708713:-1
position: 708713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728832:-1
position: 728832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728785-728832:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:724467-724566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718799-718893:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:715929-716042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713908-713998:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:713376-713455:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712996-713055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712306-712399:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:711488-711583:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:710443-710501:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:709680-709802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:708713-708772:-1:exon

ICE2
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: ICE2
note: interactor of little elongation complex ELL subunit 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(745562..770727)
location: region:745562-770727:-1
so has part: feature:745562-770727:-1:exon
subclass of: SO_0000010

129126295
type: Gene
SIO_000068: ncbigene

position:745562:-1
position: 745562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770727:-1
position: 770727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745562-770727:-1:exon

ICE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: ICE2
product: interactor of little elongation complex ELL subunit 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642147.1
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(745562..747727,748794..749049,750081..750131,750222..750306,754538..754667,756092..756270,758211..759165,759713..759897,761367..761526,762591..762707,764481..764600,766897..767161,769642..769746,770657..770727))
location: region:745562-770727:-1
so has part: feature:770657-770727:-1:exon
so has part: feature:769642-769746:-1:exon
so has part: feature:766897-767161:-1:exon
so has part: feature:764481-764600:-1:exon
so has part: feature:762591-762707:-1:exon
so has part: feature:761367-761526:-1:exon
so has part: feature:759713-759897:-1:exon
so has part: feature:758211-759165:-1:exon
so has part: feature:756092-756270:-1:exon
so has part: feature:754538-754667:-1:exon
so has part: feature:750222-750306:-1:exon
so has part: feature:750081-750131:-1:exon
so has part: feature:748794-749049:-1:exon
so has part: feature:745562-747727:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:770657-770727:-1:exon

position:770657:-1
position: 770657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:769642-769746:-1:exon

position:769642:-1
position: 769642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769746:-1
position: 769746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:766897-767161:-1:exon

position:766897:-1
position: 766897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767161:-1
position: 767161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:764481-764600:-1:exon

position:764481:-1
position: 764481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764600:-1
position: 764600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:762591-762707:-1:exon

position:762591:-1
position: 762591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762707:-1
position: 762707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:761367-761526:-1:exon

position:761367:-1
position: 761367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761526:-1
position: 761526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:759713-759897:-1:exon

position:759713:-1
position: 759713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759897:-1
position: 759897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:758211-759165:-1:exon

position:758211:-1
position: 758211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759165:-1
position: 759165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:756092-756270:-1:exon

position:756092:-1
position: 756092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756270:-1
position: 756270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:754538-754667:-1:exon

position:754538:-1
position: 754538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754667:-1
position: 754667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:750222-750306:-1:exon

position:750222:-1
position: 750222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750306:-1
position: 750306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:750081-750131:-1:exon

position:750081:-1
position: 750081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750131:-1
position: 750131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:748794-749049:-1:exon

position:748794:-1
position: 748794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749049:-1
position: 749049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:745562-747727:-1:exon

position:747727:-1
position: 747727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ICE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: ICE2
product: interactor of little elongation complex ELL subunit 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642146.1
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(745562..747727,748794..749049,750081..750131,750222..750306,754538..754667,756092..756270,758211..759165,759713..759897,761367..761526,762591..762707,763071..763205,764481..764600,766897..767161,769642..769746,770657..770727))
location: region:745562-770727:-1
so has part: feature:770657-770727:-1:exon
so has part: feature:769642-769746:-1:exon
so has part: feature:766897-767161:-1:exon
so has part: feature:764481-764600:-1:exon
so has part: feature:763071-763205:-1:exon
so has part: feature:762591-762707:-1:exon
so has part: feature:761367-761526:-1:exon
so has part: feature:759713-759897:-1:exon
so has part: feature:758211-759165:-1:exon
so has part: feature:756092-756270:-1:exon
so has part: feature:754538-754667:-1:exon
so has part: feature:750222-750306:-1:exon
so has part: feature:750081-750131:-1:exon
so has part: feature:748794-749049:-1:exon
so has part: feature:745562-747727:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:770657-770727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:769642-769746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:766897-767161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:764481-764600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763071-763205:-1:exon

position:763071:-1
position: 763071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763205:-1
position: 763205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:762591-762707:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:761367-761526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:759713-759897:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758211-759165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:756092-756270:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:754538-754667:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:750222-750306:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:750081-750131:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:748794-749049:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:745562-747727:-1:exon

ICE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: ICE2
product: interactor of little elongation complex ELL subunit 2, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642151.1
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(745562..747727,748794..749049,750081..750131,750222..750306,754538..754667,756092..756270,758211..759165,759713..759897,761367..761526,762591..762707,763071..763205,764481..764600,769642..769746,770258..770414))
location: region:745562-770414:-1
so has part: feature:770258-770414:-1:exon
so has part: feature:769642-769746:-1:exon
so has part: feature:764481-764600:-1:exon
so has part: feature:763071-763205:-1:exon
so has part: feature:762591-762707:-1:exon
so has part: feature:761367-761526:-1:exon
so has part: feature:759713-759897:-1:exon
so has part: feature:758211-759165:-1:exon
so has part: feature:756092-756270:-1:exon
so has part: feature:754538-754667:-1:exon
so has part: feature:750222-750306:-1:exon
so has part: feature:750081-750131:-1:exon
so has part: feature:748794-749049:-1:exon
so has part: feature:745562-747727:-1:exon

position:770414:-1
position: 770414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770258-770414:-1:exon

position:770258:-1
position: 770258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:769642-769746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:764481-764600:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:763071-763205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:762591-762707:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:761367-761526:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:759713-759897:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:758211-759165:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:756092-756270:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754538-754667:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:750222-750306:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:750081-750131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:748794-749049:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:745562-747727:-1:exon

ICE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: ICE2
product: interactor of little elongation complex ELL subunit 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642149.1
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(745562..747727,748794..749049,750081..750131,750222..750306,754538..754667,756092..756270,758211..759165,759713..759897,761367..761526,762591..762707,763071..763205,764481..764600,766897..767161,769642..769746,770258..770414))
location: region:745562-770414:-1
so has part: feature:770258-770414:-1:exon
so has part: feature:769642-769746:-1:exon
so has part: feature:766897-767161:-1:exon
so has part: feature:764481-764600:-1:exon
so has part: feature:763071-763205:-1:exon
so has part: feature:762591-762707:-1:exon
so has part: feature:761367-761526:-1:exon
so has part: feature:759713-759897:-1:exon
so has part: feature:758211-759165:-1:exon
so has part: feature:756092-756270:-1:exon
so has part: feature:754538-754667:-1:exon
so has part: feature:750222-750306:-1:exon
so has part: feature:750081-750131:-1:exon
so has part: feature:748794-749049:-1:exon
so has part: feature:745562-747727:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:770258-770414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:769642-769746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:766897-767161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:764481-764600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763071-763205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762591-762707:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:761367-761526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:759713-759897:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758211-759165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:756092-756270:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:754538-754667:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:750222-750306:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:750081-750131:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:748794-749049:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:745562-747727:-1:exon

ICE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: ICE2
product: interactor of little elongation complex ELL subunit 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642150.1
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(745562..747727,748794..749049,750081..750131,750222..750306,754538..754667,756092..756270,758211..759165,759713..759897,761367..761526,762591..762707,763071..763205,764481..764600,766897..767161,769642..769746,769978..770247))
location: region:745562-770247:-1
so has part: feature:769978-770247:-1:exon
so has part: feature:769642-769746:-1:exon
so has part: feature:766897-767161:-1:exon
so has part: feature:764481-764600:-1:exon
so has part: feature:763071-763205:-1:exon
so has part: feature:762591-762707:-1:exon
so has part: feature:761367-761526:-1:exon
so has part: feature:759713-759897:-1:exon
so has part: feature:758211-759165:-1:exon
so has part: feature:756092-756270:-1:exon
so has part: feature:754538-754667:-1:exon
so has part: feature:750222-750306:-1:exon
so has part: feature:750081-750131:-1:exon
so has part: feature:748794-749049:-1:exon
so has part: feature:745562-747727:-1:exon

position:770247:-1
position: 770247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769978-770247:-1:exon

position:769978:-1
position: 769978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:769642-769746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:766897-767161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:764481-764600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763071-763205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762591-762707:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:761367-761526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:759713-759897:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758211-759165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:756092-756270:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:754538-754667:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:750222-750306:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:750081-750131:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:748794-749049:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:745562-747727:-1:exon

ICE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ICE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: little elongation complex subunit 2 isoform X2
translation: MAAAGPPPLTWDIPPKNGQEVFFSHELYEKHSLSLSLSELWHLSNREAKKNAEALANSSENRQTCGMQAAQSLGEAKGPADDHPLPEPRLPYPFTSCLTEKEQKTYLYLMTKFSEKRNHFQVNEASQREFFTYMQMKEVVSNEIAEFMKFAQNAAKSCAQDYDAISEDARRYTEGTARRGKTDFPSMPVQLPTDYSTVTSIITPEKKAHVMHHDISSDSNAEKLALKYCPQVVLSNQSLFTLLNNHGLNYKEQWEIPVCVKMIPVAGSKPAKVVYVDPPLLRKEMTVRERNQIFHEIPMDFLATKTSYVPISDVSMDKPAEDNLLQWDVCPDTYQCRTIPPPDDTGMDFDDDVTELETFGATTKLSRTCKMETTFPTASNTAKILSHGLKIGGKNSSAINRGDEEEKNPLSEQEHSACASVQLPSLDGIAGCSPQEHSPCKSFQPVEVGLSKAQDVMAKEVLDNETKLNPLPVAVSSEKEPGGAQKKETCTALCSSDTDEERLVIDAECETTAPCKPAVPPAASSASAETARSPCPAQSPSASFTDCSHSTDQGKKASKKPPRKLCRELDPVGQILKMQTELLKSPSPKAPEPVVSCDNSNAVPAQLPQSPKPLVTSSTETVPAPASNATSSSRNSWTWLFEGVPKTKLPSELQLLEEDPSEYQAPEEGNVVYKLFSLGDLLLLVRCSVQKVNSLTQYQKKKRAQKPTPIFLLPKLEYQAYYGVEALTESEVCQLWTQSMLHSKCLFYVGHIDAFTSKLIMLEKISSATLREKLGLIKPANSLNILHHVLKKVSDLEEGSYLLTHAAGDSSVAIYKSSLDKSTRSSYNLHKAHCDLPAVPATLSVPWVPLDPSLPLPYHIIHGRVPCTFPPAPWEGWKQKMAGVKGQLDTAHEGRPGAMGAKGKPAKPAGNEGVAPKKLRQNFCKQRKVKKNWKSKFNKMQLK
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(747536..747727,748794..749049,750081..750131,750222..750306,754538..754667,756092..756270,758211..759165,759713..759897,761367..761526,762591..762707,764481..764600,766897..767161,769642..769746,770657..770688))
location: region:747536-770688:-1
so has part: feature:770657-770688:-1:exon
so has part: feature:769642-769746:-1:exon
so has part: feature:766897-767161:-1:exon
so has part: feature:764481-764600:-1:exon
so has part: feature:762591-762707:-1:exon
so has part: feature:761367-761526:-1:exon
so has part: feature:759713-759897:-1:exon
so has part: feature:758211-759165:-1:exon
so has part: feature:756092-756270:-1:exon
so has part: feature:754538-754667:-1:exon
so has part: feature:750222-750306:-1:exon
so has part: feature:750081-750131:-1:exon
so has part: feature:748794-749049:-1:exon
so has part: feature:747536-747727:-1:exon

XP_054498122.1
type: Protein
SIO_000068: ncbiprotein

position:747536:-1
position: 747536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770688:-1
position: 770688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770657-770688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:769642-769746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:766897-767161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:764481-764600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:762591-762707:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:761367-761526:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:759713-759897:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:758211-759165:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:756092-756270:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754538-754667:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:750222-750306:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:750081-750131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:748794-749049:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:747536-747727:-1:exon

ICE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ICE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: little elongation complex subunit 2 isoform X1
translation: MAAAGPPPLTWDIPPKNGQEVFFSHELYEKHSLSLSLSELWHLSNREAKKNAEALANSSENRQTCGMQAAQSLGEAKGPADDHPLPEPRLPYPFTSCLTEKEQKTYLYLMTKFSEKRNHFQVNEASQREFFTYMQMKEVVSNEIAEFMKFAQNAAKSCAQDYDAISEDARRYTEELLRACIGHVEKYPEVYTLQEIMSIMGGKFHTQLTFRLEKNLLAMGTARRGKTDFPSMPVQLPTDYSTVTSIITPEKKAHVMHHDISSDSNAEKLALKYCPQVVLSNQSLFTLLNNHGLNYKEQWEIPVCVKMIPVAGSKPAKVVYVDPPLLRKEMTVRERNQIFHEIPMDFLATKTSYVPISDVSMDKPAEDNLLQWDVCPDTYQCRTIPPPDDTGMDFDDDVTELETFGATTKLSRTCKMETTFPTASNTAKILSHGLKIGGKNSSAINRGDEEEKNPLSEQEHSACASVQLPSLDGIAGCSPQEHSPCKSFQPVEVGLSKAQDVMAKEVLDNETKLNPLPVAVSSEKEPGGAQKKETCTALCSSDTDEERLVIDAECETTAPCKPAVPPAASSASAETARSPCPAQSPSASFTDCSHSTDQGKKASKKPPRKLCRELDPVGQILKMQTELLKSPSPKAPEPVVSCDNSNAVPAQLPQSPKPLVTSSTETVPAPASNATSSSRNSWTWLFEGVPKTKLPSELQLLEEDPSEYQAPEEGNVVYKLFSLGDLLLLVRCSVQKVNSLTQYQKKKRAQKPTPIFLLPKLEYQAYYGVEALTESEVCQLWTQSMLHSKCLFYVGHIDAFTSKLIMLEKISSATLREKLGLIKPANSLNILHHVLKKVSDLEEGSYLLTHAAGDSSVAIYKSSLDKSTRSSYNLHKAHCDLPAVPATLSVPWVPLDPSLPLPYHIIHGRVPCTFPPAPWEGWKQKMAGVKGQLDTAHEGRPGAMGAKGKPAKPAGNEGVAPKKLRQNFCKQRKVKKNWKSKFNKMQLK
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(747536..747727,748794..749049,750081..750131,750222..750306,754538..754667,756092..756270,758211..759165,759713..759897,761367..761526,762591..762707,763071..763205,764481..764600,766897..767161,769642..769746,770657..770688))
location: region:747536-770688:-1
so has part: feature:770657-770688:-1:exon
so has part: feature:769642-769746:-1:exon
so has part: feature:766897-767161:-1:exon
so has part: feature:764481-764600:-1:exon
so has part: feature:763071-763205:-1:exon
so has part: feature:762591-762707:-1:exon
so has part: feature:761367-761526:-1:exon
so has part: feature:759713-759897:-1:exon
so has part: feature:758211-759165:-1:exon
so has part: feature:756092-756270:-1:exon
so has part: feature:754538-754667:-1:exon
so has part: feature:750222-750306:-1:exon
so has part: feature:750081-750131:-1:exon
so has part: feature:748794-749049:-1:exon
so has part: feature:747536-747727:-1:exon

XP_054498121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:770657-770688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:769642-769746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:766897-767161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:764481-764600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763071-763205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762591-762707:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:761367-761526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:759713-759897:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758211-759165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:756092-756270:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:754538-754667:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:750222-750306:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:750081-750131:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:748794-749049:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:747536-747727:-1:exon

ICE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ICE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: little elongation complex subunit 2 isoform X3
translation: MQAAQSLGEAKGPADDHPLPEPRLPYPFTSCLTEKEQKTYLYLMTKFSEKRNHFQVNEASQREFFTYMQMKEVVSNEIAEFMKFAQNAAKSCAQDYDAISEDARRYTEELLRACIGHVEKYPEVYTLQEIMSIMGGKFHTQLTFRLEKNLLAMGTARRGKTDFPSMPVQLPTDYSTVTSIITPEKKAHVMHHDISSDSNAEKLALKYCPQVVLSNQSLFTLLNNHGLNYKEQWEIPVCVKMIPVAGSKPAKVVYVDPPLLRKEMTVRERNQIFHEIPMDFLATKTSYVPISDVSMDKPAEDNLLQWDVCPDTYQCRTIPPPDDTGMDFDDDVTELETFGATTKLSRTCKMETTFPTASNTAKILSHGLKIGGKNSSAINRGDEEEKNPLSEQEHSACASVQLPSLDGIAGCSPQEHSPCKSFQPVEVGLSKAQDVMAKEVLDNETKLNPLPVAVSSEKEPGGAQKKETCTALCSSDTDEERLVIDAECETTAPCKPAVPPAASSASAETARSPCPAQSPSASFTDCSHSTDQGKKASKKPPRKLCRELDPVGQILKMQTELLKSPSPKAPEPVVSCDNSNAVPAQLPQSPKPLVTSSTETVPAPASNATSSSRNSWTWLFEGVPKTKLPSELQLLEEDPSEYQAPEEGNVVYKLFSLGDLLLLVRCSVQKVNSLTQYQKKKRAQKPTPIFLLPKLEYQAYYGVEALTESEVCQLWTQSMLHSKCLFYVGHIDAFTSKLIMLEKISSATLREKLGLIKPANSLNILHHVLKKVSDLEEGSYLLTHAAGDSSVAIYKSSLDKSTRSSYNLHKAHCDLPAVPATLSVPWVPLDPSLPLPYHIIHGRVPCTFPPAPWEGWKQKMAGVKGQLDTAHEGRPGAMGAKGKPAKPAGNEGVAPKKLRQNFCKQRKVKKNWKSKFNKMQLK
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(747536..747727,748794..749049,750081..750131,750222..750306,754538..754667,756092..756270,758211..759165,759713..759897,761367..761526,762591..762707,763071..763205,764481..764600,766897..767100))
location: region:747536-767100:-1
so has part: feature:766897-767100:-1:exon
so has part: feature:764481-764600:-1:exon
so has part: feature:763071-763205:-1:exon
so has part: feature:762591-762707:-1:exon
so has part: feature:761367-761526:-1:exon
so has part: feature:759713-759897:-1:exon
so has part: feature:758211-759165:-1:exon
so has part: feature:756092-756270:-1:exon
so has part: feature:754538-754667:-1:exon
so has part: feature:750222-750306:-1:exon
so has part: feature:750081-750131:-1:exon
so has part: feature:748794-749049:-1:exon
so has part: feature:747536-747727:-1:exon

XP_054498124.1
type: Protein
SIO_000068: ncbiprotein

position:767100:-1
position: 767100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766897-767100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:764481-764600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763071-763205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:762591-762707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761367-761526:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:759713-759897:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758211-759165:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:756092-756270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:754538-754667:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:750222-750306:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:750081-750131:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:748794-749049:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:747536-747727:-1:exon

ICE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ICE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: little elongation complex subunit 2 isoform X3
translation: MQAAQSLGEAKGPADDHPLPEPRLPYPFTSCLTEKEQKTYLYLMTKFSEKRNHFQVNEASQREFFTYMQMKEVVSNEIAEFMKFAQNAAKSCAQDYDAISEDARRYTEELLRACIGHVEKYPEVYTLQEIMSIMGGKFHTQLTFRLEKNLLAMGTARRGKTDFPSMPVQLPTDYSTVTSIITPEKKAHVMHHDISSDSNAEKLALKYCPQVVLSNQSLFTLLNNHGLNYKEQWEIPVCVKMIPVAGSKPAKVVYVDPPLLRKEMTVRERNQIFHEIPMDFLATKTSYVPISDVSMDKPAEDNLLQWDVCPDTYQCRTIPPPDDTGMDFDDDVTELETFGATTKLSRTCKMETTFPTASNTAKILSHGLKIGGKNSSAINRGDEEEKNPLSEQEHSACASVQLPSLDGIAGCSPQEHSPCKSFQPVEVGLSKAQDVMAKEVLDNETKLNPLPVAVSSEKEPGGAQKKETCTALCSSDTDEERLVIDAECETTAPCKPAVPPAASSASAETARSPCPAQSPSASFTDCSHSTDQGKKASKKPPRKLCRELDPVGQILKMQTELLKSPSPKAPEPVVSCDNSNAVPAQLPQSPKPLVTSSTETVPAPASNATSSSRNSWTWLFEGVPKTKLPSELQLLEEDPSEYQAPEEGNVVYKLFSLGDLLLLVRCSVQKVNSLTQYQKKKRAQKPTPIFLLPKLEYQAYYGVEALTESEVCQLWTQSMLHSKCLFYVGHIDAFTSKLIMLEKISSATLREKLGLIKPANSLNILHHVLKKVSDLEEGSYLLTHAAGDSSVAIYKSSLDKSTRSSYNLHKAHCDLPAVPATLSVPWVPLDPSLPLPYHIIHGRVPCTFPPAPWEGWKQKMAGVKGQLDTAHEGRPGAMGAKGKPAKPAGNEGVAPKKLRQNFCKQRKVKKNWKSKFNKMQLK
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(747536..747727,748794..749049,750081..750131,750222..750306,754538..754667,756092..756270,758211..759165,759713..759897,761367..761526,762591..762707,763071..763205,764481..764600,766897..767100))
location: region:747536-767100:-1
so has part: feature:766897-767100:-1:exon
so has part: feature:764481-764600:-1:exon
so has part: feature:763071-763205:-1:exon
so has part: feature:762591-762707:-1:exon
so has part: feature:761367-761526:-1:exon
so has part: feature:759713-759897:-1:exon
so has part: feature:758211-759165:-1:exon
so has part: feature:756092-756270:-1:exon
so has part: feature:754538-754667:-1:exon
so has part: feature:750222-750306:-1:exon
so has part: feature:750081-750131:-1:exon
so has part: feature:748794-749049:-1:exon
so has part: feature:747536-747727:-1:exon

XP_054498125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:766897-767100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:764481-764600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763071-763205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:762591-762707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761367-761526:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:759713-759897:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758211-759165:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:756092-756270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:754538-754667:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:750222-750306:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:750081-750131:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:748794-749049:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:747536-747727:-1:exon

ICE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ICE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: little elongation complex subunit 2 isoform X4
translation: MKEVVSNEIAEFMKFAQNAAKSCAQDYDAISEDARRYTEELLRACIGHVEKYPEVYTLQEIMSIMGGKFHTQLTFRLEKNLLAMGTARRGKTDFPSMPVQLPTDYSTVTSIITPEKKAHVMHHDISSDSNAEKLALKYCPQVVLSNQSLFTLLNNHGLNYKEQWEIPVCVKMIPVAGSKPAKVVYVDPPLLRKEMTVRERNQIFHEIPMDFLATKTSYVPISDVSMDKPAEDNLLQWDVCPDTYQCRTIPPPDDTGMDFDDDVTELETFGATTKLSRTCKMETTFPTASNTAKILSHGLKIGGKNSSAINRGDEEEKNPLSEQEHSACASVQLPSLDGIAGCSPQEHSPCKSFQPVEVGLSKAQDVMAKEVLDNETKLNPLPVAVSSEKEPGGAQKKETCTALCSSDTDEERLVIDAECETTAPCKPAVPPAASSASAETARSPCPAQSPSASFTDCSHSTDQGKKASKKPPRKLCRELDPVGQILKMQTELLKSPSPKAPEPVVSCDNSNAVPAQLPQSPKPLVTSSTETVPAPASNATSSSRNSWTWLFEGVPKTKLPSELQLLEEDPSEYQAPEEGNVVYKLFSLGDLLLLVRCSVQKVNSLTQYQKKKRAQKPTPIFLLPKLEYQAYYGVEALTESEVCQLWTQSMLHSKCLFYVGHIDAFTSKLIMLEKISSATLREKLGLIKPANSLNILHHVLKKVSDLEEGSYLLTHAAGDSSVAIYKSSLDKSTRSSYNLHKAHCDLPAVPATLSVPWVPLDPSLPLPYHIIHGRVPCTFPPAPWEGWKQKMAGVKGQLDTAHEGRPGAMGAKGKPAKPAGNEGVAPKKLRQNFCKQRKVKKNWKSKFNKMQLK
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(747536..747727,748794..749049,750081..750131,750222..750306,754538..754667,756092..756270,758211..759165,759713..759897,761367..761526,762591..762707,763071..763205,764481..764597))
location: region:747536-764597:-1
so has part: feature:764481-764597:-1:exon
so has part: feature:763071-763205:-1:exon
so has part: feature:762591-762707:-1:exon
so has part: feature:761367-761526:-1:exon
so has part: feature:759713-759897:-1:exon
so has part: feature:758211-759165:-1:exon
so has part: feature:756092-756270:-1:exon
so has part: feature:754538-754667:-1:exon
so has part: feature:750222-750306:-1:exon
so has part: feature:750081-750131:-1:exon
so has part: feature:748794-749049:-1:exon
so has part: feature:747536-747727:-1:exon

XP_054498126.1
type: Protein
SIO_000068: ncbiprotein

position:764597:-1
position: 764597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764481-764597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:763071-763205:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:762591-762707:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761367-761526:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:759713-759897:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:758211-759165:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:756092-756270:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:754538-754667:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:750222-750306:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:750081-750131:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:748794-749049:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:747536-747727:-1:exon

ICE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: ICE2
product: interactor of little elongation complex ELL subunit 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_054642152.1
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(748961..749049,750081..750131,754538..754667,756092..756270,758211..759165,759713..759897,761367..761526,762591..762707,763071..763205,764481..764600,766897..767161,769642..769746,770657..770727))
location: region:748961-770727:-1
so has part: feature:770657-770727:-1:exon
so has part: feature:769642-769746:-1:exon
so has part: feature:766897-767161:-1:exon
so has part: feature:764481-764600:-1:exon
so has part: feature:763071-763205:-1:exon
so has part: feature:762591-762707:-1:exon
so has part: feature:761367-761526:-1:exon
so has part: feature:759713-759897:-1:exon
so has part: feature:758211-759165:-1:exon
so has part: feature:756092-756270:-1:exon
so has part: feature:754538-754667:-1:exon
so has part: feature:750081-750131:-1:exon
so has part: feature:748961-749049:-1:exon

position:748961:-1
position: 748961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770657-770727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:769642-769746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:766897-767161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:764481-764600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763071-763205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762591-762707:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:761367-761526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:759713-759897:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758211-759165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:756092-756270:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:754538-754667:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:750081-750131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:748961-749049:-1:exon

ICE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ICE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: little elongation complex subunit 2 isoform X5
translation: MAAAGPPPLTWDIPPKNGQEVFFSHELYEKHSLSLSLSELWHLSNREAKKNAEALANSSENRQTCGMQAAQSLGEAKGPADDHPLPEPRLPYPFTSCLTEKEQKTYLYLMTKFSEKRNHFQVNEASQREFFTYMQMKEVVSNEIAEFMKFAQNAAKSCAQDYDAISEDARRYTEELLRACIGHVEKYPEVYTLQEIMSIMGGKFHTQLTFRLEKNLLAMGTARRGKTDFPSMPVQLPTDYSTVTSIITPEKKAHVMHHDISSDSNAEKLALKYCPQVVLSNQSLFTLLNNHGLNYKEQWEIPVCVKMIPVAGSKPAKVVYVDPPLLRKEMTVRERNQIFHEIPMDFLATKTSYVPISDVSMDKPAEDNLLQWDVCPDTYQCRTIPPPDDTGMDFDDDVTELETFGATTKLSRTCKMETTFPTASNTAKILSHGLKIGGKNSSAINRGDEEEKNPLSEQEHSACASVQLPSLDGIAGCSPQEHSPCKSFQPVEVGLSKAQDVMAKEVLDNETKLNPLPVAVSSEKEPGGAQKKETCTALCSSDTDEERLVIDAECETTAPCKPAVPPAASSASAETARSPCPAQSPSASFTDCSHSTDQGKKASKKPPRKLCRELDPVGQILKMQTELLKSPSPKAPEPVVSCDNSNAVPAQLPQSPKPLVTSSTETVPAPASNATSSSRNSWTWLFEGVPKTKLPSELQLLEEDPSEYQAPEEGNVVYKLFSLGDLLLLVRCSVQKVNSLTQYQKKKRAQKPTPIFLLPKLEYQAYYGVEALTESEVCQLWTQSMLHSKCLFYVGLQIH
SIO_010081: ICE2
subclass of: SO_0000673
so part of: ICE2
location: complement(join(750115..750131,754538..754667,756092..756270,758211..759165,759713..759897,761367..761526,762591..762707,763071..763205,764481..764600,766897..767161,769642..769746,770657..770688))
location: region:750115-770688:-1
so has part: feature:770657-770688:-1:exon
so has part: feature:769642-769746:-1:exon
so has part: feature:766897-767161:-1:exon
so has part: feature:764481-764600:-1:exon
so has part: feature:763071-763205:-1:exon
so has part: feature:762591-762707:-1:exon
so has part: feature:761367-761526:-1:exon
so has part: feature:759713-759897:-1:exon
so has part: feature:758211-759165:-1:exon
so has part: feature:756092-756270:-1:exon
so has part: feature:754538-754667:-1:exon
so has part: feature:750115-750131:-1:exon

XP_054498127.1
type: Protein
SIO_000068: ncbiprotein

position:750115:-1
position: 750115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770657-770688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:769642-769746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:766897-767161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:764481-764600:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:763071-763205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:762591-762707:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:761367-761526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:759713-759897:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758211-759165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:756092-756270:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:754538-754667:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:750115-750131:-1:exon

RORA
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: RORA
note: RAR related orphan receptor A; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(782645..1131327)
location: region:782645-1131327:-1
so has part: feature:782645-1131327:-1:exon
subclass of: SO_0000010

129126335
type: Gene
SIO_000068: ncbigene

position:782645:-1
position: 782645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131327:-1
position: 1131327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:782645-1131327:-1:exon

RORA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: RORA
product: RAR related orphan receptor A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
transcript id: XM_054642212.1
SIO_010081: RORA
subclass of: SO_0000673
so part of: RORA
location: complement(join(782645..783183,784420..784532,785781..785891,787249..787356,788025..788157,789351..789472,792223..792618,794299..794440,802304..802389,886732..886761,1131156..1131327))
location: region:782645-1131327:-1
so has part: feature:1131156-1131327:-1:exon
so has part: feature:886732-886761:-1:exon
so has part: feature:802304-802389:-1:exon
so has part: feature:794299-794440:-1:exon
so has part: feature:792223-792618:-1:exon
so has part: feature:789351-789472:-1:exon
so has part: feature:788025-788157:-1:exon
so has part: feature:787249-787356:-1:exon
so has part: feature:785781-785891:-1:exon
so has part: feature:784420-784532:-1:exon
so has part: feature:782645-783183:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1131156-1131327:-1:exon

position:1131156:-1
position: 1131156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:886732-886761:-1:exon

position:886732:-1
position: 886732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886761:-1
position: 886761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:802304-802389:-1:exon

position:802304:-1
position: 802304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802389:-1
position: 802389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:794299-794440:-1:exon

position:794299:-1
position: 794299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794440:-1
position: 794440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:792223-792618:-1:exon

position:792223:-1
position: 792223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792618:-1
position: 792618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:789351-789472:-1:exon

position:789351:-1
position: 789351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789472:-1
position: 789472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:788025-788157:-1:exon

position:788025:-1
position: 788025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788157:-1
position: 788157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:787249-787356:-1:exon

position:787249:-1
position: 787249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787356:-1
position: 787356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:785781-785891:-1:exon

position:785781:-1
position: 785781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785891:-1
position: 785891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:784420-784532:-1:exon

position:784420:-1
position: 784420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784532:-1
position: 784532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:782645-783183:-1:exon

position:783183:-1
position: 783183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RORA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: RORA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor ROR-alpha
translation: MESAPAAPDPAASEPGSSVSEAAAGARDTPVNLEPARKSDAPAPVRRQSYSSSSSSRGISVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTPTYNITTNGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPEVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
SIO_010081: RORA
subclass of: SO_0000673
so part of: RORA
location: complement(join(783019..783183,784420..784532,785781..785891,787249..787356,788025..788157,789351..789472,792223..792618,794299..794440,802304..802389,886732..886761,1131156..1131327))
location: region:783019-1131327:-1
so has part: feature:1131156-1131327:-1:exon
so has part: feature:886732-886761:-1:exon
so has part: feature:802304-802389:-1:exon
so has part: feature:794299-794440:-1:exon
so has part: feature:792223-792618:-1:exon
so has part: feature:789351-789472:-1:exon
so has part: feature:788025-788157:-1:exon
so has part: feature:787249-787356:-1:exon
so has part: feature:785781-785891:-1:exon
so has part: feature:784420-784532:-1:exon
so has part: feature:783019-783183:-1:exon

XP_054498187.1
type: Protein
SIO_000068: ncbiprotein

position:783019:-1
position: 783019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1131156-1131327:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886732-886761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:802304-802389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:794299-794440:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:792223-792618:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:789351-789472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:788025-788157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787249-787356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:785781-785891:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:784420-784532:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:783019-783183:-1:exon

VPS13C
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: VPS13C
note: vacuolar protein sorting 13 homolog C; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1299235..1375907)
location: region:1299235-1375907:-1
so has part: feature:1299235-1375907:-1:exon
subclass of: SO_0000010

129126133
type: Gene
SIO_000068: ncbigene

position:1299235:-1
position: 1299235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375907:-1
position: 1375907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1299235-1375907:-1:exon

VPS13C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: VPS13C
product: vacuolar protein sorting 13 homolog C, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641914.1
SIO_010081: VPS13C
subclass of: SO_0000673
so part of: VPS13C
location: complement(join(1299235..1300865,1302224..1302310,1302574..1302697,1303675..1303766,1309867..1309981,1310636..1310759,1311792..1311837,1312658..1312821,1313380..1313455,1313702..1313815,1314029..1314110,1314381..1314517,1314952..1315065,1315384..1315495,1315927..1315996,1316086..1316167,1317653..1317793,1318852..1319002,1319325..1319560,1320506..1320632,1320879..1321012,1321580..1321708,1322063..1322227,1322756..1322860,1323575..1323964,1325307..1325601,1325840..1325961,1326722..1326879,1328306..1328570,1329562..1329717,1330132..1330221,1331353..1331718,1332220..1332312,1333054..1333283,1333500..1333738,1334286..1334455,1335399..1335529,1336363..1336519,1337640..1337784,1338186..1338490,1338922..1339089,1339505..1339608,1340140..1340256,1341255..1341420,1342486..1342545,1343339..1343418,1344087..1344243,1344542..1344675,1345120..1345228,1345922..1346069,1346310..1346614,1347372..1347539,1347837..1347940,1349189..1349305,1349462..1349615,1350903..1350962,1351139..1351215,1351634..1351787,1352339..1352478,1353186..1353264,1353555..1353684,1354014..1354131,1354725..1354851,1355548..1355684,1356043..1356157,1356301..1356493,1357660..1357802,1358403..1358497,1359049..1359184,1359779..1359841,1360295..1360466,1361098..1361204,1362082..1362209,1362506..1362563,1363194..1363274,1364041..1364100,1364667..1364726,1365560..1365669,1371524..1371625,1372357..1372452,1373161..1373203,1374195..1374238,1375782..1375907))
location: region:1299235-1375907:-1
so has part: feature:1375782-1375907:-1:exon
so has part: feature:1374195-1374238:-1:exon
so has part: feature:1373161-1373203:-1:exon
so has part: feature:1372357-1372452:-1:exon
so has part: feature:1371524-1371625:-1:exon
so has part: feature:1365560-1365669:-1:exon
so has part: feature:1364667-1364726:-1:exon
so has part: feature:1364041-1364100:-1:exon
so has part: feature:1363194-1363274:-1:exon
so has part: feature:1362506-1362563:-1:exon
so has part: feature:1362082-1362209:-1:exon
so has part: feature:1361098-1361204:-1:exon
so has part: feature:1360295-1360466:-1:exon
so has part: feature:1359779-1359841:-1:exon
so has part: feature:1359049-1359184:-1:exon
so has part: feature:1358403-1358497:-1:exon
so has part: feature:1357660-1357802:-1:exon
so has part: feature:1356301-1356493:-1:exon
so has part: feature:1356043-1356157:-1:exon
so has part: feature:1355548-1355684:-1:exon
so has part: feature:1354725-1354851:-1:exon
so has part: feature:1354014-1354131:-1:exon
so has part: feature:1353555-1353684:-1:exon
so has part: feature:1353186-1353264:-1:exon
so has part: feature:1352339-1352478:-1:exon
so has part: feature:1351634-1351787:-1:exon
so has part: feature:1351139-1351215:-1:exon
so has part: feature:1350903-1350962:-1:exon
so has part: feature:1349462-1349615:-1:exon
so has part: feature:1349189-1349305:-1:exon
so has part: feature:1347837-1347940:-1:exon
so has part: feature:1347372-1347539:-1:exon
so has part: feature:1346310-1346614:-1:exon
so has part: feature:1345922-1346069:-1:exon
so has part: feature:1345120-1345228:-1:exon
so has part: feature:1344542-1344675:-1:exon
so has part: feature:1344087-1344243:-1:exon
so has part: feature:1343339-1343418:-1:exon
so has part: feature:1342486-1342545:-1:exon
so has part: feature:1341255-1341420:-1:exon
so has part: feature:1340140-1340256:-1:exon
so has part: feature:1339505-1339608:-1:exon
so has part: feature:1338922-1339089:-1:exon
so has part: feature:1338186-1338490:-1:exon
so has part: feature:1337640-1337784:-1:exon
so has part: feature:1336363-1336519:-1:exon
so has part: feature:1335399-1335529:-1:exon
so has part: feature:1334286-1334455:-1:exon
so has part: feature:1333500-1333738:-1:exon
so has part: feature:1333054-1333283:-1:exon
so has part: feature:1332220-1332312:-1:exon
so has part: feature:1331353-1331718:-1:exon
so has part: feature:1330132-1330221:-1:exon
so has part: feature:1329562-1329717:-1:exon
so has part: feature:1328306-1328570:-1:exon
so has part: feature:1326722-1326879:-1:exon
so has part: feature:1325840-1325961:-1:exon
so has part: feature:1325307-1325601:-1:exon
so has part: feature:1323575-1323964:-1:exon
so has part: feature:1322756-1322860:-1:exon
so has part: feature:1322063-1322227:-1:exon
so has part: feature:1321580-1321708:-1:exon
so has part: feature:1320879-1321012:-1:exon
so has part: feature:1320506-1320632:-1:exon
so has part: feature:1319325-1319560:-1:exon
so has part: feature:1318852-1319002:-1:exon
so has part: feature:1317653-1317793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1375782-1375907:-1:exon

position:1375782:-1
position: 1375782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1374195-1374238:-1:exon

position:1374195:-1
position: 1374195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1374238:-1
position: 1374238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1373161-1373203:-1:exon

position:1373161:-1
position: 1373161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1373203:-1
position: 1373203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1372357-1372452:-1:exon

position:1372357:-1
position: 1372357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1372452:-1
position: 1372452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1371524-1371625:-1:exon

position:1371524:-1
position: 1371524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371625:-1
position: 1371625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1365560-1365669:-1:exon

position:1365560:-1
position: 1365560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365669:-1
position: 1365669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1364667-1364726:-1:exon

position:1364667:-1
position: 1364667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364726:-1
position: 1364726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1364041-1364100:-1:exon

position:1364041:-1
position: 1364041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364100:-1
position: 1364100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1363194-1363274:-1:exon

position:1363194:-1
position: 1363194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363274:-1
position: 1363274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1362506-1362563:-1:exon

position:1362506:-1
position: 1362506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362563:-1
position: 1362563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1362082-1362209:-1:exon

position:1362082:-1
position: 1362082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362209:-1
position: 1362209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1361098-1361204:-1:exon

position:1361098:-1
position: 1361098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361204:-1
position: 1361204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1360295-1360466:-1:exon

position:1360295:-1
position: 1360295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360466:-1
position: 1360466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1359779-1359841:-1:exon

position:1359779:-1
position: 1359779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359841:-1
position: 1359841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1359049-1359184:-1:exon

position:1359049:-1
position: 1359049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359184:-1
position: 1359184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1358403-1358497:-1:exon

position:1358403:-1
position: 1358403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358497:-1
position: 1358497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1357660-1357802:-1:exon

position:1357660:-1
position: 1357660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357802:-1
position: 1357802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1356301-1356493:-1:exon

position:1356301:-1
position: 1356301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356493:-1
position: 1356493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1356043-1356157:-1:exon

position:1356043:-1
position: 1356043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356157:-1
position: 1356157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1355548-1355684:-1:exon

position:1355548:-1
position: 1355548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355684:-1
position: 1355684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1354725-1354851:-1:exon

position:1354725:-1
position: 1354725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354851:-1
position: 1354851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1354014-1354131:-1:exon

position:1354014:-1
position: 1354014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354131:-1
position: 1354131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1353555-1353684:-1:exon

position:1353555:-1
position: 1353555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353684:-1
position: 1353684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1353186-1353264:-1:exon

position:1353186:-1
position: 1353186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353264:-1
position: 1353264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1352339-1352478:-1:exon

position:1352339:-1
position: 1352339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1352478:-1
position: 1352478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1351634-1351787:-1:exon

position:1351634:-1
position: 1351634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1351787:-1
position: 1351787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1351139-1351215:-1:exon

position:1351139:-1
position: 1351139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1351215:-1
position: 1351215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1350903-1350962:-1:exon

position:1350903:-1
position: 1350903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350962:-1
position: 1350962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1349462-1349615:-1:exon

position:1349462:-1
position: 1349462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349615:-1
position: 1349615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1349189-1349305:-1:exon

position:1349189:-1
position: 1349189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349305:-1
position: 1349305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1347837-1347940:-1:exon

position:1347837:-1
position: 1347837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347940:-1
position: 1347940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1347372-1347539:-1:exon

position:1347372:-1
position: 1347372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347539:-1
position: 1347539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1346310-1346614:-1:exon

position:1346310:-1
position: 1346310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346614:-1
position: 1346614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1345922-1346069:-1:exon

position:1345922:-1
position: 1345922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346069:-1
position: 1346069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1345120-1345228:-1:exon

position:1345120:-1
position: 1345120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345228:-1
position: 1345228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1344542-1344675:-1:exon

position:1344542:-1
position: 1344542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344675:-1
position: 1344675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1344087-1344243:-1:exon

position:1344087:-1
position: 1344087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344243:-1
position: 1344243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1343339-1343418:-1:exon

position:1343339:-1
position: 1343339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1343418:-1
position: 1343418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1342486-1342545:-1:exon

position:1342486:-1
position: 1342486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1342545:-1
position: 1342545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1341255-1341420:-1:exon

position:1341255:-1
position: 1341255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1341420:-1
position: 1341420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1340140-1340256:-1:exon

position:1340140:-1
position: 1340140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1340256:-1
position: 1340256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1339505-1339608:-1:exon

position:1339505:-1
position: 1339505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339608:-1
position: 1339608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1338922-1339089:-1:exon

position:1338922:-1
position: 1338922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339089:-1
position: 1339089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1338186-1338490:-1:exon

position:1338186:-1
position: 1338186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338490:-1
position: 1338490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1337640-1337784:-1:exon

position:1337640:-1
position: 1337640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337784:-1
position: 1337784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1336363-1336519:-1:exon

position:1336363:-1
position: 1336363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1336519:-1
position: 1336519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1335399-1335529:-1:exon

position:1335399:-1
position: 1335399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335529:-1
position: 1335529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1334286-1334455:-1:exon

position:1334286:-1
position: 1334286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1334455:-1
position: 1334455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1333500-1333738:-1:exon

position:1333500:-1
position: 1333500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333738:-1
position: 1333738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1333054-1333283:-1:exon

position:1333054:-1
position: 1333054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333283:-1
position: 1333283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:1332220-1332312:-1:exon

position:1332220:-1
position: 1332220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1332312:-1
position: 1332312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:1331353-1331718:-1:exon

position:1331353:-1
position: 1331353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331718:-1
position: 1331718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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VPS13C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: VPS13C
product: vacuolar protein sorting 13 homolog C, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641913.1
SIO_010081: VPS13C
subclass of: SO_0000673
so part of: VPS13C
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urn:…
SIO_000300: 72
SIO_000628: feature:1315384-1315495:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:1314952-1315065:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:1314381-1314517:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:1314029-1314110:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:1313702-1313815:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:1313380-1313455:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:1312658-1312821:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:1311792-1311837:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:1310636-1310759:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:1309867-1309981:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:1303675-1303766:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:1302574-1302697:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:1302224-1302310:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:1299235-1300865:-1:exon

VPS13C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: VPS13C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intermembrane lipid transfer protein VPS13C isoform X2
translation: MVLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFRIKVGQIDKLTLKIPWKNLYGEAVVATLEGLYLLIVPGASVKYDAEKEEKYLQDNKQKELARIEEALQKAAEKDKPKEEKKDTFLEKLATQVIKNVQVKITGIHVKYEDDITDPQCPISLGVTLGELSLLTTNENWTPSILNEAAKIIYKLLCLDSLSAYWNIHSKMYYHGSREQILDQLKKGIPCHGHQPEDYQYIFRPVSASARLYINPYAEVELKTPKIDCNVEVQRIVIEFTKPQYLSMIDLLESIDYMVRNAPYRRFRPNVPLHKNAREWWKYAGNSVLEVHIRRRTRMWSWSNIKQHRQLLKSYKNVYKNKLTQSKLSEETQRQIQDLERKLDVFNTILARQQAQVETIRSGQKLLKKKSTEAEKKSGGWFSGFWGKRESRIKEDEESLVPETLDELMTPEEKAKLYTAIGYSDSSHHLSLPKQYVAHVVTLKLLSTSLTIKEDKNVAETLKVQIIDLSTKISQRPGAQAIKVEAKLENWYVTGLRQENIVPSLVASIGDSKSSLLRIEFDVNPEDSTADQSLTIESQPVEVKYDARTINAMVEFFQTSKGMDLERLTTATLMKLEEIKERTATGLAHIIEMRKVLDLKINLKPSYLVVPRTGFYHENSDLLILDFGTFQLNSINQGNSEASNFSSLEEIMDKAYDKFDVKIKNVQLLFGRTGEDWKKARFQHPSTLHILQPMDIHVQLAKSMVERDSRMAKFKVSGGLPLVHVRLSDQKIKAISDLIDSIPLPQKSSMSVPSTKVAAIPTIPVVGKGLLSTPQLLAEMVSDSEEEYFDFEESSEPTDSSVIKGEEIRKEEPAQEELTDLHLKFEIKEVLVELTRQRKIEETVLVFDVMHLGTEATVKTYHLAAVSYLKKISLDYYGIGGKKTPIHLISSSDKPGLDLLKVEYVKADRNGPQFQTIFNNTEQMIQVTFSSLNLLLHTEALMSAVSFLTAVSPSGSDRSGETASKEKKQEDDSRLKKVSKPSKDKDVFDFKLFAKLDAFCLNICDEKKNIAEIKIQGLDSSLCLQPSQTEFFARLKDIVVIDVDSRTLHKKAVSIVGDEVFSFNLTLNPHATEGEAYTDMSKVDGSVCLKVGCIQLVYLHKFLMSLLTFLNNFQTAKETLSAATVQAAEKAASSVKDLAQRSFRLAMDIHLKAPVLVIPQSSTSPNAVVIDLGLIKVQNHFVLVSSEGSSLPPVIDKMDVQLTKLKLSRITLETDLTHPDIQILHPINLSLSVKRNLSAAWFHKLPVLEVTGYLDTMNVVLSQEDLNVCLKVLTENLGEAEETPKDPKSVLQKEGKMKELERSVLTQDKSVSEGMLSEKRKTTSNEDVINMLLNFEIKEVVITLMKQVQKERYPLHILTVLQLGTKTKIRNHELAAAAYLKKITMRCTEIHDSKGDPLCILNSSSETDEHLLKMEYIKADPDGPDFVTAYQNTKQNINVIFSCLDIVLHTEALLSIMSFLTFSVPSGALPSTEKSSEHKPPMKEQEKGSTLRPVPGDAAHEDVSELKLTAKLNAFSITVCDQSSTIADIRVQGMDASVAMKPKEIKVFSRLEDIVITNVDPKTIHKKAVSIMGDEVFRFHMSLYPDATAGEAYADMSRVDGKMSLKVGCIQIIYLHKFFMSLLNFLNNFQAAQEALTAVTVQAAEMAASSMKDFAKKSFRLLMDVNLKAPVIVVPESSASSNALVADLGLIRVQNEFQLVSSDESPLPPVIDNMDVQLTHLKLSRCILSTDSQPDSEILCPVSLTLLVQRNLAAAWYHKCPTIAIKGDLKPMQIALSEGDLTVIMKILLENLGGASSQPHTVQENIEDMQISKKGKAPHESGGSEGTLVDSGQKCISAVQSPVECSTLLKFDFNFESLSVTLYNSATTQESLLPVHSDKLRLGELRLHLMASAGQMFSDGSMDITLKLKACTLDDLREGIQNVTARMIDKKDDTNDTSMIDIRYKQDKNG…
SIO_010081: VPS13C
subclass of: SO_0000673
so part of: VPS13C
location: complement(join(1300776..1300865,1302224..1302310,1302574..1302697,1303675..1303766,1309867..1309981,1310636..1310759,1311792..1311837,1312658..1312821,1313380..1313455,1313702..1313815,1314029..1314110,1314381..1314517,1314952..1315065,1315384..1315495,1315927..1315996,1316086..1316167,1317653..1317793,1318852..1319002,1319325..1319560,1320506..1320632,1320879..1321012,1321580..1321708,1322063..1322227,1322756..1322860,1323575..1323964,1325307..1325601,1325840..1325961,1326722..1326879,1328306..1328570,1329562..1329717,1330132..1330221,1331353..1331718,1332220..1332312,1333054..1333283,1333500..1333738,1334286..1334455,1335399..1335529,1336363..1336519,1337640..1337784,1338186..1338490,1338922..1339089,1339505..1339608,1340140..1340256,1341255..1341420,1342486..1342545,1343339..1343418,1344087..1344243,1344542..1344675,1345120..1345228,1345922..1346069,1346310..1346614,1347372..1347539,1347837..1347940,1349189..1349305,1349462..1349615,1350903..1350962,1351139..1351215,1351634..1351787,1352339..1352478,1353186..1353264,1353555..1353684,1354014..1354131,1354725..1354851,1355548..1355684,1356043..1356157,1356301..1356493,1357660..1357802,1358403..1358497,1359049..1359184,1359779..1359841,1360295..1360466,1361098..1361204,1362082..1362209,1362506..1362563,1363194..1363274,1364041..1364100,1364667..1364726,1365560..1365669,1371524..1371625,1372357..1372452,1373161..1373203,1374195..1374238,1375782..1375881))
location: region:1300776-1375881:-1
so has part: feature:1375782-1375881:-1:exon
so has part: feature:1374195-1374238:-1:exon
so has part: feature:1373161-1373203:-1:exon
so has part: feature:1372357-1372452:-1:exon
so has part: feature:1371524-1371625:-1:exon
so has part: feature:1365560-1365669:-1:exon
so has part: feature:1364667-1364726:-1:exon
so has part: feature:1364041-1364100:-1:exon
so has part: feature:1363194-1363274:-1:exon
so has part: feature:1362506-1362563:-1:exon
so has part: feature:1362082-1362209:-1:exon
so has part: feature:1361098-1361204:-1:exon
so has part: feature:1360295-1360466:-1:exon
so has part: feature:1359779-1359841:-1:exon
so has part: feature:1359049-1359184:-1:exon
so has part: feature:1358403-1358497:-1:exon
so has part: feature:1357660-1357802:-1:exon
so has part: feature:1356301-1356493:-1:exon
so has part: feature:1356043-1356157:-1:exon
so has part: feature:1355548-1355684:-1:exon
so has part: feature:1354725-1354851:-1:exon
so has part: feature:1354014-1354131:-1:exon
so has part: feature:1353555-1353684:-1:exon
so has part: feature:1353186-1353264:-1:exon
so has part: feature:1352339-1352478:-1:exon
so has part: feature:1351634-1351787:-1:exon
so has part: feature:1351139-1351215:-1:exon
so has part: feature:1350903-1350962:-1:exon
so has part: feature:1349462-1349615:-1:exon
so has part: feature:1349189-1349305:-1:exon
so has part: feature:1347837-1347940:-1:exon
so has part: feature:1347372-1347539:-1:exon
so has part: feature:1346310-1346614:-1:exon
so has part: feature:1345922-1346069:-1:exon
so has part: feature:1345120-1345228:-1:exon
so has part: feature:1344542-1344675:-1:exon
so has part: feature:1344087-1344243:-1:exon
so has part: feature:1343339-1343418:-1:exon
so has part: feature:1342486-1342545:-1:exon
so has part: feature:1341255-1341420:-1:exon
so has part: feature:1340140-1340256:-1:exon
so has part: feature:1339505-1339608:-1:exon
so has part: feature:1338922-1339089:-1:exon
so has part: feature:1338186-1338490:-1:exon
so has part: feature:1337640-1337784:-1:exon
so has part: feature:1336363-1336519:-1:exon
so has part: feature:1335399-1335529:-1:exon
so has part: feature:1334286-1334455:-1:exon
so has part: feature:1333500-1333738:-1:exon
so has part: feature:1333054-1333283:-1:exon
so has part: feature:1332220-1332312:-1:exon
so has part: feature:1331353-1331718:-1:exon
so has part: feature:1330132-1330221:-1:exon
so has part: feature:1329562-1329717:-1:exon
so has part: feature:1328306-1328570:-1:exon
so has part: feature:1326722-1326879:-1:exon
so has part: feature:1325840-1325961:-1:exon
so has part: feature:1325307-1325601:-1:exon
so has part: feature:1323575-1323964:-1:exon
so has part: feature:1322756-1322860:-1:exon
so has part: feature:1322063-1322227:-1:exon
so has part: feature:1321580-1321708:-1:exon
so has part: feature:1320879-1321012:-1:exon
so has part: feature:1320506-1320632:-1:exon
so has part: feature:1319325-1319560:-1:exon
so has part: feature:1318852-1319002:-1:exon

XP_054497889.1
type: Protein
SIO_000068: ncbiprotein

position:1300776:-1
position: 1300776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375881:-1
position: 1375881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1375782-1375881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1374195-1374238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1373161-1373203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1372357-1372452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1371524-1371625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1365560-1365669:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1364667-1364726:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1364041-1364100:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1363194-1363274:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1362506-1362563:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1362082-1362209:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1361098-1361204:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1360295-1360466:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1359779-1359841:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1359049-1359184:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1358403-1358497:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1357660-1357802:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1356301-1356493:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1356043-1356157:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1355548-1355684:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1354725-1354851:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1354014-1354131:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1353555-1353684:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1353186-1353264:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1352339-1352478:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1351634-1351787:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1351139-1351215:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1350903-1350962:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1349462-1349615:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1349189-1349305:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1347837-1347940:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1347372-1347539:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1346310-1346614:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1345922-1346069:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1345120-1345228:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1344542-1344675:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1344087-1344243:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1343339-1343418:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1342486-1342545:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1341255-1341420:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1340140-1340256:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1339505-1339608:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1338922-1339089:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1338186-1338490:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1337640-1337784:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1336363-1336519:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1335399-1335529:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1334286-1334455:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1333500-1333738:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1333054-1333283:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1332220-1332312:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1331353-1331718:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1330132-1330221:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1329562-1329717:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1328306-1328570:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1326722-1326879:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1325840-1325961:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1325307-1325601:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1323575-1323964:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1322756-1322860:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:1322063-1322227:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:1321580-1321708:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:1320879-1321012:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:1320506-1320632:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:1319325-1319560:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:1318852-1319002:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:1317653-1317793:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:1316086-1316167:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:1315927-1315996:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:1315384-1315495:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:1314952-1315065:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:1314381-1314517:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:1314029-1314110:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:1313702-1313815:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:1313380-1313455:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:1312658-1312821:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:1311792-1311837:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:1310636-1310759:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:1309867-1309981:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:1303675-1303766:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:1302574-1302697:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:1302224-1302310:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:1300776-1300865:-1:exon

VPS13C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: VPS13C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intermembrane lipid transfer protein VPS13C isoform X1
translation: MVLESVVADLLNRFLGDYVENLNKSQLKLGIWGGNVALDNLQIKENALSELDVPFRIKVGQIDKLTLKIPWKNLYGEAVVATLEGLYLLIVPGASVKYDAEKEEKYLQDNKQKELARIEEALQKAAEKGTHCQDSLYGLESLVYKDTKPGRKRKKYKKHFKRPFRGRDHSKDKPKEEKKDTFLEKLATQVIKNVQVKITGIHVKYEDDITDPQCPISLGVTLGELSLLTTNENWTPSILNEAAKIIYKLLCLDSLSAYWNIHSKMYYHGSREQILDQLKKGIPCHGHQPEDYQYIFRPVSASARLYINPYAEVELKTPKIDCNVEVQRIVIEFTKPQYLSMIDLLESIDYMVRNAPYRRFRPNVPLHKNAREWWKYAGNSVLEVHIRRRTRMWSWSNIKQHRQLLKSYKNVYKNKLTQSKLSEETQRQIQDLERKLDVFNTILARQQAQVETIRSGQKLLKKKSTEAEKKSGGWFSGFWGKRESRIKEDEESLVPETLDELMTPEEKAKLYTAIGYSDSSHHLSLPKQYVAHVVTLKLLSTSLTIKEDKNVAETLKVQIIDLSTKISQRPGAQAIKVEAKLENWYVTGLRQENIVPSLVASIGDSKSSLLRIEFDVNPEDSTADQSLTIESQPVEVKYDARTINAMVEFFQTSKGMDLERLTTATLMKLEEIKERTATGLAHIIEMRKVLDLKINLKPSYLVVPRTGFYHENSDLLILDFGTFQLNSINQGNSEASNFSSLEEIMDKAYDKFDVKIKNVQLLFGRTGEDWKKARFQHPSTLHILQPMDIHVQLAKSMVERDSRMAKFKVSGGLPLVHVRLSDQKIKAISDLIDSIPLPQKSSMSVPSTKVAAIPTIPVVGKGLLSTPQLLAEMVSDSEEEYFDFEESSEPTDSSVIKGEEIRKEEPAQEELTDLHLKFEIKEVLVELTRQRKIEETVLVFDVMHLGTEATVKTYHLAAVSYLKKISLDYYGIGGKKTPIHLISSSDKPGLDLLKVEYVKADRNGPQFQTIFNNTEQMIQVTFSSLNLLLHTEALMSAVSFLTAVSPSGSDRSGETASKEKKQEDDSRLKKVSKPSKDKDVFDFKLFAKLDAFCLNICDEKKNIAEIKIQGLDSSLCLQPSQTEFFARLKDIVVIDVDSRTLHKKAVSIVGDEVFSFNLTLNPHATEGEAYTDMSKVDGSVCLKVGCIQLVYLHKFLMSLLTFLNNFQTAKETLSAATVQAAEKAASSVKDLAQRSFRLAMDIHLKAPVLVIPQSSTSPNAVVIDLGLIKVQNHFVLVSSEGSSLPPVIDKMDVQLTKLKLSRITLETDLTHPDIQILHPINLSLSVKRNLSAAWFHKLPVLEVTGYLDTMNVVLSQEDLNVCLKVLTENLGEAEETPKDPKSVLQKEGKMKELERSVLTQDKSVSEGMLSEKRKTTSNEDVINMLLNFEIKEVVITLMKQVQKERYPLHILTVLQLGTKTKIRNHELAAAAYLKKITMRCTEIHDSKGDPLCILNSSSETDEHLLKMEYIKADPDGPDFVTAYQNTKQNINVIFSCLDIVLHTEALLSIMSFLTFSVPSGALPSTEKSSEHKPPMKEQEKGSTLRPVPGDAAHEDVSELKLTAKLNAFSITVCDQSSTIADIRVQGMDASVAMKPKEIKVFSRLEDIVITNVDPKTIHKKAVSIMGDEVFRFHMSLYPDATAGEAYADMSRVDGKMSLKVGCIQIIYLHKFFMSLLNFLNNFQAAQEALTAVTVQAAEMAASSMKDFAKKSFRLLMDVNLKAPVIVVPESSASSNALVADLGLIRVQNEFQLVSSDESPLPPVIDNMDVQLTHLKLSRCILSTDSQPDSEILCPVSLTLLVQRNLAAAWYHKCPTIAIKGDLKPMQIALSEGDLTVIMKILLENLGGASSQPHTVQENIEDMQISKKGKAPHESGGSEGTLVDSGQKCISAVQSPVECSTLLKFDFNFESLSVTLYNSATTQESLLPVHSDKLRLGELRLHLMASAGQMFSDGSMDITLK…
SIO_010081: VPS13C
subclass of: SO_0000673
so part of: VPS13C
location: complement(join(1300776..1300865,1302224..1302310,1302574..1302697,1303675..1303766,1309867..1309981,1310636..1310759,1311792..1311837,1312658..1312821,1313380..1313455,1313702..1313815,1314029..1314110,1314381..1314517,1314952..1315065,1315384..1315495,1315927..1315996,1316086..1316167,1317653..1317793,1318852..1319002,1319325..1319560,1320506..1320632,1320879..1321012,1321580..1321708,1322063..1322227,1322756..1322860,1323575..1323964,1325307..1325601,1325840..1325961,1326722..1326879,1328306..1328570,1329562..1329717,1330132..1330221,1331353..1331718,1332220..1332312,1333054..1333283,1333500..1333738,1334286..1334455,1335399..1335529,1336363..1336519,1337640..1337784,1338186..1338490,1338922..1339089,1339505..1339608,1340140..1340256,1341255..1341420,1342486..1342545,1343339..1343418,1344087..1344243,1344542..1344675,1345120..1345228,1345922..1346069,1346310..1346614,1347372..1347539,1347837..1347940,1349189..1349305,1349462..1349615,1350903..1350962,1351139..1351215,1351634..1351787,1352339..1352478,1353186..1353264,1353555..1353684,1354014..1354131,1354725..1354851,1355548..1355684,1356043..1356157,1356301..1356493,1357660..1357802,1358403..1358497,1359049..1359184,1359779..1359841,1360295..1360466,1361098..1361204,1362082..1362209,1362506..1362563,1363194..1363274,1364041..1364100,1364667..1364726,1365560..1365669,1367399..1367464,1369100..1369162,1371524..1371625,1372357..1372452,1373161..1373203,1374195..1374238,1375782..1375881))
location: region:1300776-1375881:-1
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so has part: feature:1374195-1374238:-1:exon
so has part: feature:1373161-1373203:-1:exon
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so has part: feature:1361098-1361204:-1:exon
so has part: feature:1360295-1360466:-1:exon
so has part: feature:1359779-1359841:-1:exon
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so has part: feature:1356301-1356493:-1:exon
so has part: feature:1356043-1356157:-1:exon
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so has part: feature:1354725-1354851:-1:exon
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so has part: feature:1321580-1321708:-1:exon
so has part: feature:1320879-1321012:-1:exon
so has part: feature:1320506-1320632:-1:exon

XP_054497888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
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urn:…
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urn:…
SIO_000300: 3
SIO_000628: feature:1373161-1373203:-1:exon

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SIO_000628: feature:1371524-1371625:-1:exon

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SIO_000628: feature:1369100-1369162:-1:exon

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SIO_000628: feature:1367399-1367464:-1:exon

urn:…
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SIO_000628: feature:1365560-1365669:-1:exon

urn:…
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SIO_000628: feature:1364667-1364726:-1:exon

urn:…
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SIO_000628: feature:1364041-1364100:-1:exon

urn:…
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SIO_000628: feature:1363194-1363274:-1:exon

urn:…
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SIO_000628: feature:1362506-1362563:-1:exon

urn:…
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SIO_000628: feature:1362082-1362209:-1:exon

urn:…
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SIO_000628: feature:1361098-1361204:-1:exon

urn:…
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SIO_000628: feature:1360295-1360466:-1:exon

urn:…
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SIO_000628: feature:1359779-1359841:-1:exon

urn:…
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SIO_000628: feature:1359049-1359184:-1:exon

urn:…
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SIO_000628: feature:1358403-1358497:-1:exon

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SIO_000628: feature:1357660-1357802:-1:exon

urn:…
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SIO_000628: feature:1356301-1356493:-1:exon

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SIO_000628: feature:1356043-1356157:-1:exon

urn:…
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SIO_000628: feature:1355548-1355684:-1:exon

urn:…
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SIO_000628: feature:1354725-1354851:-1:exon

urn:…
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SIO_000628: feature:1354014-1354131:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1353555-1353684:-1:exon

urn:…
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SIO_000628: feature:1353186-1353264:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1352339-1352478:-1:exon

urn:…
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SIO_000628: feature:1351634-1351787:-1:exon

urn:…
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SIO_000628: feature:1351139-1351215:-1:exon

urn:…
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SIO_000628: feature:1350903-1350962:-1:exon

urn:…
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SIO_000628: feature:1349462-1349615:-1:exon

urn:…
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SIO_000628: feature:1349189-1349305:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1347837-1347940:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1347372-1347539:-1:exon

urn:…
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SIO_000628: feature:1346310-1346614:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1345922-1346069:-1:exon

urn:…
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SIO_000628: feature:1345120-1345228:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1344542-1344675:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1344087-1344243:-1:exon

urn:…
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SIO_000628: feature:1343339-1343418:-1:exon

urn:…
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SIO_000628: feature:1342486-1342545:-1:exon

urn:…
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SIO_000628: feature:1341255-1341420:-1:exon

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SIO_000628: feature:1338186-1338490:-1:exon

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SIO_000628: feature:1337640-1337784:-1:exon

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SIO_000628: feature:1336363-1336519:-1:exon

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SIO_000628: feature:1335399-1335529:-1:exon

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SIO_000628: feature:1334286-1334455:-1:exon

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SIO_000628: feature:1333500-1333738:-1:exon

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SIO_000628: feature:1332220-1332312:-1:exon

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SIO_000628: feature:1331353-1331718:-1:exon

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SIO_000628: feature:1320879-1321012:-1:exon

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SIO_000628: feature:1320506-1320632:-1:exon

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SIO_000628: feature:1319325-1319560:-1:exon

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SIO_000628: feature:1317653-1317793:-1:exon

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SIO_000628: feature:1316086-1316167:-1:exon

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SIO_000628: feature:1315384-1315495:-1:exon

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urn:…
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urn:…
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SIO_000628: feature:1313702-1313815:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:1313380-1313455:-1:exon

urn:…
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SIO_000628: feature:1312658-1312821:-1:exon

urn:…
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SIO_000628: feature:1311792-1311837:-1:exon

urn:…
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SIO_000628: feature:1310636-1310759:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:1309867-1309981:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:1303675-1303766:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:1302574-1302697:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:1302224-1302310:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:1300776-1300865:-1:exon

LOC129126468
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129126468
note: C2 calcium-dependent domain-containing protein 4C-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1402932..1404298)
location: region:1402932-1404298:-1
so has part: feature:1402932-1404298:-1:exon
subclass of: SO_0000010

129126468
type: Gene
SIO_000068: ncbigene

position:1402932:-1
position: 1402932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404298:-1
position: 1404298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1402932-1404298:-1:exon

LOC129126468
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129126468
product: C2 calcium-dependent domain-containing protein 4C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_054642388.1
SIO_010081: LOC129126468
subclass of: SO_0000673
so part of: LOC129126468
location: complement(1402932..1404298)
location: region:1402932-1404298:-1
so has part: feature:1402932-1404298:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1402932-1404298:-1:exon

LOC129126468
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129126468
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C2 calcium-dependent domain-containing protein 4C-like
translation: MWLLEKIRGSHENGNLPSSSFLGLPQSQNLPEKAQLRAAAFPNVITPDRIPEFCIPPRLTSSGPIKGSGFHQDHSSVDAALSSDYSPSSCPHLIQVESVEEEISALEEESTNADPQSQAALSLPHFPRAPTSYGFCTLLESPHTRRKESIFHGDPRGALPSLKLSRSRANTFSGKGSMSNPIAISFASVRLPPKHLSLHRQGACDSDTASSSDSSPFSSPLLTRSPPRPCSLIKAQSQEGLLCRTLKDKSKHSMPRNNSLSTEESSSTDNSPSAIRRASEGLLGIRSFSTSCSPLFPVDLSCSRERLVGESAVAMDKGGVLRLSAEYCSENERLRIRLISAEGLYDDSVEPKSINCSISFSLVPGKTQKQRSTVIKRSRNPIFNEDFFFDGIAEEELYSLSVRMKATNKGCSMKRDYTLGERELSLMSMLAV
SIO_010081: LOC129126468
subclass of: SO_0000673
so part of: LOC129126468
location: complement(1402985..1404283)
location: region:1402985-1404283:-1
so has part: feature:1402985-1404283:-1:exon

XP_054498363.1
type: Protein
SIO_000068: ncbiprotein

position:1402985:-1
position: 1402985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404283:-1
position: 1404283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1402985-1404283:-1:exon

TLN2
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: TLN2
note: talin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1432172..1579712
location: region:1432172-1579712:1
so has part: feature:1432172-1579712:1:exon
subclass of: SO_0000010

129126336
type: Gene
SIO_000068: ncbigene

position:1432172:1
position: 1432172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1579712:1
position: 1579712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1432172-1579712:1:exon

TLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TLN2
product: talin 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642214.1
SIO_010081: TLN2
subclass of: SO_0000673
so part of: TLN2
location: join(1432172..1432243,1475443..1475525,1487018..1487188,1492239..1492336,1492976..1493105,1494373..1494525,1495871..1496013,1497418..1497545,1502598..1502661,1504821..1504925,1505693..1505848,1506848..1506949,1509764..1509840,1511421..1511601,1513193..1513306,1513928..1514036,1514707..1514915,1515047..1515145,1516610..1516777,1516877..1517171,1518425..1518591,1519705..1519833,1521532..1521645,1521947..1522060,1523370..1523504,1524413..1524541,1525158..1525260,1527555..1527763,1528555..1528674,1529534..1529731,1531787..1531926,1534716..1534809,1536332..1536421,1537543..1537665,1538918..1539061,1540892..1541053,1542121..1542261,1543352..1543533,1543950..1544082,1545500..1545601,1546363..1546533,1547139..1547285,1548137..1548238,1549574..1549693,1551212..1551358,1552099..1552265,1552969..1553152,1553774..1553899,1554190..1554306,1556296..1556481,1560161..1560268,1562263..1562368,1564007..1564131,1570777..1570902,1572631..1572693,1572787..1572969,1575641..1575766,1576624..1579712)
location: region:1432172-1579712:1
so has part: feature:1432172-1432243:1:exon
so has part: feature:1475443-1475525:1:exon
so has part: feature:1487018-1487188:1:exon
so has part: feature:1492239-1492336:1:exon
so has part: feature:1492976-1493105:1:exon
so has part: feature:1494373-1494525:1:exon
so has part: feature:1495871-1496013:1:exon
so has part: feature:1497418-1497545:1:exon
so has part: feature:1502598-1502661:1:exon
so has part: feature:1504821-1504925:1:exon
so has part: feature:1505693-1505848:1:exon
so has part: feature:1506848-1506949:1:exon
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so has part: feature:1513928-1514036:1:exon
so has part: feature:1514707-1514915:1:exon
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so has part: feature:1516610-1516777:1:exon
so has part: feature:1516877-1517171:1:exon
so has part: feature:1518425-1518591:1:exon
so has part: feature:1519705-1519833:1:exon
so has part: feature:1521532-1521645:1:exon
so has part: feature:1521947-1522060:1:exon
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so has part: feature:1528555-1528674:1:exon
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so has part: feature:1531787-1531926:1:exon
so has part: feature:1534716-1534809:1:exon
so has part: feature:1536332-1536421:1:exon
so has part: feature:1537543-1537665:1:exon
so has part: feature:1538918-1539061:1:exon
so has part: feature:1540892-1541053:1:exon
so has part: feature:1542121-1542261:1:exon
so has part: feature:1543352-1543533:1:exon
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so has part: feature:1547139-1547285:1:exon
so has part: feature:1548137-1548238:1:exon
so has part: feature:1549574-1549693:1:exon
so has part: feature:1551212-1551358:1:exon
so has part: feature:1552099-1552265:1:exon
so has part: feature:1552969-1553152:1:exon
so has part: feature:1553774-1553899:1:exon
so has part: feature:1554190-1554306:1:exon
so has part: feature:1556296-1556481:1:exon
so has part: feature:1560161-1560268:1:exon
so has part: feature:1562263-1562368:1:exon
so has part: feature:1564007-1564131:1:exon
so has part: feature:1570777-1570902:1:exon
so has part: feature:1572631-1572693:1:exon
so has part: feature:1572787-1572969:1:exon
so has part: feature:1575641-1575766:1:exon
so has part: feature:1576624-1579712:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1432172-1432243:1:exon

position:1432243:1
position: 1432243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1475443-1475525:1:exon

position:1475443:1
position: 1475443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1475525:1
position: 1475525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1487018-1487188:1:exon

position:1487018:1
position: 1487018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1487188:1
position: 1487188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1492239-1492336:1:exon

position:1492239:1
position: 1492239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1492336:1
position: 1492336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1492976-1493105:1:exon

position:1492976:1
position: 1492976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1493105:1
position: 1493105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1494373-1494525:1:exon

position:1494373:1
position: 1494373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1494525:1
position: 1494525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1495871-1496013:1:exon

position:1495871:1
position: 1495871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1496013:1
position: 1496013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1497418-1497545:1:exon

position:1497418:1
position: 1497418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1497545:1
position: 1497545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1502598-1502661:1:exon

position:1502598:1
position: 1502598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1502661:1
position: 1502661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1504821-1504925:1:exon

position:1504821:1
position: 1504821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1504925:1
position: 1504925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1505693-1505848:1:exon

position:1505693:1
position: 1505693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1505848:1
position: 1505848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1506848-1506949:1:exon

position:1506848:1
position: 1506848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1506949:1
position: 1506949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1509764-1509840:1:exon

position:1509764:1
position: 1509764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1509840:1
position: 1509840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1511421-1511601:1:exon

position:1511421:1
position: 1511421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1511601:1
position: 1511601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1513193-1513306:1:exon

position:1513193:1
position: 1513193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513306:1
position: 1513306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1513928-1514036:1:exon

position:1513928:1
position: 1513928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514036:1
position: 1514036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1514707-1514915:1:exon

position:1514707:1
position: 1514707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514915:1
position: 1514915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1515047-1515145:1:exon

position:1515047:1
position: 1515047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515145:1
position: 1515145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1516610-1516777:1:exon

position:1516610:1
position: 1516610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1516777:1
position: 1516777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1516877-1517171:1:exon

position:1516877:1
position: 1516877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1517171:1
position: 1517171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1518425-1518591:1:exon

position:1518425:1
position: 1518425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518591:1
position: 1518591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1519705-1519833:1:exon

position:1519705:1
position: 1519705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1519833:1
position: 1519833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1521532-1521645:1:exon

position:1521532:1
position: 1521532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1521645:1
position: 1521645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1521947-1522060:1:exon

position:1521947:1
position: 1521947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1522060:1
position: 1522060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1523370-1523504:1:exon

position:1523370:1
position: 1523370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1523504:1
position: 1523504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1524413-1524541:1:exon

position:1524413:1
position: 1524413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1524541:1
position: 1524541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1525158-1525260:1:exon

position:1525158:1
position: 1525158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1525260:1
position: 1525260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1527555-1527763:1:exon

position:1527555:1
position: 1527555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1527763:1
position: 1527763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1528555-1528674:1:exon

position:1528555:1
position: 1528555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1528674:1
position: 1528674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1529534-1529731:1:exon

position:1529534:1
position: 1529534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529731:1
position: 1529731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1531787-1531926:1:exon

position:1531787:1
position: 1531787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1531926:1
position: 1531926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1534716-1534809:1:exon

position:1534716:1
position: 1534716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1534809:1
position: 1534809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1536332-1536421:1:exon

position:1536332:1
position: 1536332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1536421:1
position: 1536421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1537543-1537665:1:exon

position:1537543:1
position: 1537543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1537665:1
position: 1537665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1538918-1539061:1:exon

position:1538918:1
position: 1538918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1539061:1
position: 1539061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1540892-1541053:1:exon

position:1540892:1
position: 1540892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1541053:1
position: 1541053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1542121-1542261:1:exon

position:1542121:1
position: 1542121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1542261:1
position: 1542261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1543352-1543533:1:exon

position:1543352:1
position: 1543352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1543533:1
position: 1543533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1543950-1544082:1:exon

position:1543950:1
position: 1543950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1544082:1
position: 1544082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1545500-1545601:1:exon

position:1545500:1
position: 1545500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1545601:1
position: 1545601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1546363-1546533:1:exon

position:1546363:1
position: 1546363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1546533:1
position: 1546533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1547139-1547285:1:exon

position:1547139:1
position: 1547139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1547285:1
position: 1547285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1548137-1548238:1:exon

position:1548137:1
position: 1548137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1548238:1
position: 1548238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1549574-1549693:1:exon

position:1549574:1
position: 1549574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1549693:1
position: 1549693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1551212-1551358:1:exon

position:1551212:1
position: 1551212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1551358:1
position: 1551358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1552099-1552265:1:exon

position:1552099:1
position: 1552099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1552265:1
position: 1552265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1552969-1553152:1:exon

position:1552969:1
position: 1552969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1553152:1
position: 1553152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1553774-1553899:1:exon

position:1553774:1
position: 1553774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1553899:1
position: 1553899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1554190-1554306:1:exon

position:1554190:1
position: 1554190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1554306:1
position: 1554306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1556296-1556481:1:exon

position:1556296:1
position: 1556296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1556481:1
position: 1556481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:1560161-1560268:1:exon

position:1560161:1
position: 1560161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1560268:1
position: 1560268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:1562263-1562368:1:exon

position:1562263:1
position: 1562263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1562368:1
position: 1562368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:1564007-1564131:1:exon

position:1564007:1
position: 1564007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1564131:1
position: 1564131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:1570777-1570902:1:exon

position:1570777:1
position: 1570777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1570902:1
position: 1570902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:1572631-1572693:1:exon

position:1572631:1
position: 1572631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1572693:1
position: 1572693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:1572787-1572969:1:exon

position:1572787:1
position: 1572787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1572969:1
position: 1572969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:1575641-1575766:1:exon

position:1575641:1
position: 1575641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1575766:1
position: 1575766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:1576624-1579712:1:exon

position:1576624:1
position: 1576624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: talin-2
translation: MVALSLKICVRQCNVVKTMQFEPSTAVYDACRVIRERVPEAQTGQASDYGLFLSDDDPRKGIWLEAGRTLDYYMLRNGDILEYKKKQRPQKIRMLDGSVKTVMVDDSKTVGELLVTICSRIGITNYEEYSLIQESIEEKKEESTGTLKKDRTLLRDERKMEKLKAKLHTDDDLNWLDHSRTFREQGVDENETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFEKACEFGGFQAQIQFGPHVEHKHKPGFLDLKEFLPKEYTKQRGAEKRIFQEHKNCGEMTEIEAKVKYVKLARSLRTYGVSFFLVKEKMKGKNKLVPRLLGVTKDSVMRVDEKTKEVLQEWPLTTVKRWAASPKSFTLDFGEYQESYYSVQTTEGEQISQLIAGYIDIILKKKQSKDRFGLEGDEESTMLEESVSPKKPTILQQQFNRTGKVEHGSVALPAVMRSGSSGPETFNVGIMPSPQQQVTTGQMHRGHMPPLTSAQQALMGTINSSMHAVQQAQADLSEVDNLPPLGQDMASRVWVQNKVDESKHEIHSQVDAITAGTASVVNLTAGDPVDTDYTAVGCAITTISSNLTEMSKGVKLLAALMDDEVGSGEDLLKAARTLASAVSDLLKAVQPTSGEPRQTVLTAAGSIGQASGELLRQIGENETDERFQDVLMSLAKAVANAAAMLVLKAKNVAQVAEDTVLQNRVIAAATQCALSTSQLVACAKVVSPTISSPVCQEQLIEAGKLVDRSVENCVRACQAATDDSELLKQVSAAASIVSQALHDLLQHVRQFASRGEPIGRYDQATDTIMCVTESIFSSMGDAGEMVRQARVLAQATSDLVNAMRSDAEAEIDMENSKKLLAAAKLLADSTARMVEAAKGAAANPENEDQQQRLREAAEGLRVATNAAAQNAIKKKIVNRLEIAAKQAAAAATQTIAASQNAAVSNKNTAAHQQLVQSCKTVADHIPQLVQGVRGSQAQAEDLSAQLALINSSQNFLQPGSKMVASAKAAVPTVTDQAAAMQLSQCAKNLATSLAELRTASQKAHEACGPMEIDSALNTVQTLKNELQDAKMAAVDGQLKPLPGETLEKCTQDLGSTSKAVGSSMAQLLTCAAQGNEHYTGVAARETAQALKTLAQAARGVAASTSDPVAAHAMLDSARDVMEGSAMLIQEAKQALAAPGDADSQQRLAQVAKAVSHSLNNCVNCLPGQKDVDVALKSIGESSKKLLVDSLPPSSKSFQEAQSELNQAAADLNQSAGEVVHATRGQSGELAAASGKFSDDFDEFLDAGIEMAGQAQTKEDQIQVIGNLKSISMASSKLLLAAKSLSVDPGAPNAKNLLAAAARAVTESINQLITLCTQQAPGQKECDNALRELETVKGMLDNPNEPVSDLSYFDCIEGVMENSKVLGESMAGISQNAKTGDLLVFGECVGVASKALCGLTEAAAQAAYLVGISDPNSQAGQQGLVDPIQFARANQAIQMACQNLVDPASSPSQVLSAATIVAKHTSALCNACRIASSKTANPVAKRHFVQSAKEVANSTANLVKTIKALDGDFSEENRNKCRTATAPLIEAVENLTAFASNPEFVSIPAQISTEGSQAQEPILVSARTMLESSSLLIKTARSLAINPKDPPTWSVLAGHSHTVSDSIKSLITSIRDKAPGQRECDFSIDGINRCIRDIEQASLAAVSQSLATRDDISVEALQEQLTSVVQEIGHLIDPIATAARGEAAQLGHKVTQLASYFEPLVSAAVGVASKTLNHQQQMTVLDQSKTLAESALQILYAAKEGGGNPKASHTHDAITEAAQLMKEAVDDIMVTLNEAASEVGMVGGMVDSIAEAMTKLDEGTPPDPKGTFVDYQTTVVKYSKAIAVTAQEMMTKSVTNPEELGGLASQMTNDYGHLALQGRMAAATAEPEEIGFQIRTRVQELGHGCIFLVQKAGALQICPTDSYTKRELIECARAVTEKVSLVLSALQAGNKGTQACITAASAVSGIIADLDTTIMFA…
SIO_010081: TLN2
subclass of: SO_0000673
so part of: TLN2
location: join(1487053..1487188,1492239..1492336,1492976..1493105,1494373..1494525,1495871..1496013,1497418..1497545,1502598..1502661,1504821..1504925,1505693..1505848,1506848..1506949,1509764..1509840,1511421..1511601,1513193..1513306,1513928..1514036,1514707..1514915,1515047..1515145,1516610..1516777,1516877..1517171,1518425..1518591,1519705..1519833,1521532..1521645,1521947..1522060,1523370..1523504,1524413..1524541,1525158..1525260,1527555..1527763,1528555..1528674,1529534..1529731,1531787..1531926,1534716..1534809,1536332..1536421,1537543..1537665,1538918..1539061,1540892..1541053,1542121..1542261,1543352..1543533,1543950..1544082,1545500..1545601,1546363..1546533,1547139..1547285,1548137..1548238,1549574..1549693,1551212..1551358,1552099..1552265,1552969..1553152,1553774..1553899,1554190..1554306,1556296..1556481,1560161..1560268,1562263..1562368,1564007..1564131,1570777..1570902,1572631..1572693,1572787..1572969,1575641..1575766,1576624..1576752)
location: region:1487053-1576752:1
so has part: feature:1487053-1487188:1:exon
so has part: feature:1492239-1492336:1:exon
so has part: feature:1492976-1493105:1:exon
so has part: feature:1494373-1494525:1:exon
so has part: feature:1495871-1496013:1:exon
so has part: feature:1497418-1497545:1:exon
so has part: feature:1502598-1502661:1:exon
so has part: feature:1504821-1504925:1:exon
so has part: feature:1505693-1505848:1:exon
so has part: feature:1506848-1506949:1:exon
so has part: feature:1509764-1509840:1:exon
so has part: feature:1511421-1511601:1:exon
so has part: feature:1513193-1513306:1:exon
so has part: feature:1513928-1514036:1:exon
so has part: feature:1514707-1514915:1:exon
so has part: feature:1515047-1515145:1:exon
so has part: feature:1516610-1516777:1:exon
so has part: feature:1516877-1517171:1:exon
so has part: feature:1518425-1518591:1:exon
so has part: feature:1519705-1519833:1:exon
so has part: feature:1521532-1521645:1:exon
so has part: feature:1521947-1522060:1:exon
so has part: feature:1523370-1523504:1:exon
so has part: feature:1524413-1524541:1:exon
so has part: feature:1525158-1525260:1:exon
so has part: feature:1527555-1527763:1:exon
so has part: feature:1528555-1528674:1:exon
so has part: feature:1529534-1529731:1:exon
so has part: feature:1531787-1531926:1:exon
so has part: feature:1534716-1534809:1:exon
so has part: feature:1536332-1536421:1:exon
so has part: feature:1537543-1537665:1:exon
so has part: feature:1538918-1539061:1:exon
so has part: feature:1540892-1541053:1:exon
so has part: feature:1542121-1542261:1:exon
so has part: feature:1543352-1543533:1:exon
so has part: feature:1543950-1544082:1:exon
so has part: feature:1545500-1545601:1:exon
so has part: feature:1546363-1546533:1:exon
so has part: feature:1547139-1547285:1:exon
so has part: feature:1548137-1548238:1:exon
so has part: feature:1549574-1549693:1:exon
so has part: feature:1551212-1551358:1:exon
so has part: feature:1552099-1552265:1:exon
so has part: feature:1552969-1553152:1:exon
so has part: feature:1553774-1553899:1:exon
so has part: feature:1554190-1554306:1:exon
so has part: feature:1556296-1556481:1:exon
so has part: feature:1560161-1560268:1:exon
so has part: feature:1562263-1562368:1:exon
so has part: feature:1564007-1564131:1:exon
so has part: feature:1570777-1570902:1:exon
so has part: feature:1572631-1572693:1:exon
so has part: feature:1572787-1572969:1:exon
so has part: feature:1575641-1575766:1:exon
so has part: feature:1576624-1576752:1:exon

XP_054498189.1
type: Protein
SIO_000068: ncbiprotein

position:1487053:1
position: 1487053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1576752:1
position: 1576752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1487053-1487188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1492239-1492336:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1492976-1493105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1494373-1494525:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1495871-1496013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497418-1497545:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1502598-1502661:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1504821-1504925:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1505693-1505848:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1506848-1506949:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1509764-1509840:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1511421-1511601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1513193-1513306:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1513928-1514036:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1514707-1514915:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515047-1515145:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1516610-1516777:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1516877-1517171:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1518425-1518591:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1519705-1519833:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1521532-1521645:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1521947-1522060:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1523370-1523504:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1524413-1524541:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1525158-1525260:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1527555-1527763:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1528555-1528674:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1529534-1529731:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1531787-1531926:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1534716-1534809:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1536332-1536421:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1537543-1537665:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1538918-1539061:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1540892-1541053:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1542121-1542261:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1543352-1543533:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1543950-1544082:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1545500-1545601:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1546363-1546533:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1547139-1547285:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1548137-1548238:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1549574-1549693:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1551212-1551358:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1552099-1552265:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1552969-1553152:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1553774-1553899:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1554190-1554306:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1556296-1556481:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1560161-1560268:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1562263-1562368:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1564007-1564131:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1570777-1570902:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1572631-1572693:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1572787-1572969:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1575641-1575766:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1576624-1576752:1:exon

TPM1
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: TPM1
note: tropomyosin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1646436..1666225
location: region:1646436-1666225:1
so has part: feature:1646436-1666225:1:exon
subclass of: SO_0000010

129126123
type: Gene
SIO_000068: ncbigene

position:1646436:1
position: 1646436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666225:1
position: 1666225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646436-1666225:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TPM1
product: tropomyosin 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_054641900.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646436..1646677,1647334..1647459,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1660428..1660694)
location: region:1646436-1660694:1
so has part: feature:1646436-1646677:1:exon
so has part: feature:1647334-1647459:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1660428-1660694:1:exon

position:1660694:1
position: 1660694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646436-1646677:1:exon

position:1646677:1
position: 1646677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1647334-1647459:1:exon

position:1647334:1
position: 1647334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1647459:1
position: 1647459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

position:1653859:1
position: 1653859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653992:1
position: 1653992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

position:1655186:1
position: 1655186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1655303:1
position: 1655303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

position:1655753:1
position: 1655753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1655823:1
position: 1655823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

position:1656638:1
position: 1656638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1656713:1
position: 1656713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

position:1657261:1
position: 1657261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1657323:1
position: 1657323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

position:1657574:1
position: 1657574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1657643:1
position: 1657643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1660428-1660694:1:exon

position:1660428:1
position: 1660428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TPM1
product: tropomyosin 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_054641897.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646436..1646677,1647639..1647764,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1660428..1660694)
location: region:1646436-1660694:1
so has part: feature:1646436-1646677:1:exon
so has part: feature:1647639-1647764:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1660428-1660694:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1646436-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647639-1647764:1:exon

position:1647639:1
position: 1647639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1647764:1
position: 1647764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1660428-1660694:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TPM1
product: tropomyosin 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_054641899.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646437..1646677,1647334..1647459,1647639..1647764,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1658917..1658999)
location: region:1646437-1658999:1
so has part: feature:1646437-1646677:1:exon
so has part: feature:1647334-1647459:1:exon
so has part: feature:1647639-1647764:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1658917-1658999:1:exon

position:1646437:1
position: 1646437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1658999:1
position: 1658999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646437-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647334-1647459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1647639-1647764:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1658917-1658999:1:exon

position:1658917:1
position: 1658917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TPM1
product: tropomyosin 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641890.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646441..1646677,1647639..1647764,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1658917..1658995,1660428..1660633)
location: region:1646441-1660633:1
so has part: feature:1646441-1646677:1:exon
so has part: feature:1647639-1647764:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1658917-1658995:1:exon
so has part: feature:1660428-1660633:1:exon

position:1646441:1
position: 1646441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1660633:1
position: 1660633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646441-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647639-1647764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1658917-1658995:1:exon

position:1658995:1
position: 1658995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1660428-1660633:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TPM1
product: tropomyosin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_054641891.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646442..1646677,1647334..1647459,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1658917..1658999)
location: region:1646442-1658999:1
so has part: feature:1646442-1646677:1:exon
so has part: feature:1647334-1647459:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1658917-1658999:1:exon

position:1646442:1
position: 1646442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646442-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647334-1647459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1658917-1658999:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TPM1
product: tropomyosin 1, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641893.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646444..1646677,1647334..1647459,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1664036..1666225)
location: region:1646444-1666225:1
so has part: feature:1646444-1646677:1:exon
so has part: feature:1647334-1647459:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1664036-1666225:1:exon

position:1646444:1
position: 1646444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646444-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647334-1647459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1664036-1666225:1:exon

position:1664036:1
position: 1664036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TPM1
product: tropomyosin 1, transcript variant X11
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641898.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646445..1646677,1647334..1647459,1647639..1647764,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1665282..1666225)
location: region:1646445-1666225:1
so has part: feature:1646445-1646677:1:exon
so has part: feature:1647334-1647459:1:exon
so has part: feature:1647639-1647764:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1665282-1666225:1:exon

position:1646445:1
position: 1646445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646445-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647334-1647459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1647639-1647764:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1665282-1666225:1:exon

position:1665282:1
position: 1665282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TPM1
product: tropomyosin 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641892.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646445..1646677,1647639..1647764,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1664036..1666225)
location: region:1646445-1666225:1
so has part: feature:1646445-1646677:1:exon
so has part: feature:1647639-1647764:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1664036-1666225:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1646445-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647639-1647764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1664036-1666225:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TPM1
product: tropomyosin 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641888.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646475..1646677,1647334..1647459,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1665282..1666225)
location: region:1646475-1666225:1
so has part: feature:1646475-1646677:1:exon
so has part: feature:1647334-1647459:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1665282-1666225:1:exon

position:1646475:1
position: 1646475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646475-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647334-1647459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1665282-1666225:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TPM1
product: tropomyosin 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641887.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646476..1646677,1647639..1647764,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1665282..1666225)
location: region:1646476-1666225:1
so has part: feature:1646476-1646677:1:exon
so has part: feature:1647639-1647764:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1665282-1666225:1:exon

position:1646476:1
position: 1646476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646476-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647639-1647764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1665282-1666225:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X11
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLENDIVQLEKQLRGTEDTRDQVLEELHKSEDSLLSAEENAAKLEDELVALQKKLKATEDELDKYSESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLNMHQMLDQTLLELNNM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646564..1646677,1647334..1647459,1647639..1647764,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1665282..1665364)
location: region:1646564-1665364:1
so has part: feature:1646564-1646677:1:exon
so has part: feature:1647334-1647459:1:exon
so has part: feature:1647639-1647764:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1665282-1665364:1:exon

XP_054497873.1
type: Protein
SIO_000068: ncbiprotein

position:1646564:1
position: 1646564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1665364:1
position: 1665364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646564-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647334-1647459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1647639-1647764:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1665282-1665364:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X2
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLENDIVQLEKQLRGTEDTRDQVLEELHKSEDSLLSAEENAAKAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLNMHQMLDQTLLELNNM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646564..1646677,1647334..1647459,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1665282..1665364)
location: region:1646564-1665364:1
so has part: feature:1646564-1646677:1:exon
so has part: feature:1647334-1647459:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1665282-1665364:1:exon

XP_054497863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1646564-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647334-1647459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1665282-1665364:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X1
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKATEDELDKYSESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLNMHQMLDQTLLELNNM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646564..1646677,1647639..1647764,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1665282..1665364)
location: region:1646564-1665364:1
so has part: feature:1646564-1646677:1:exon
so has part: feature:1647639-1647764:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1665282-1665364:1:exon

XP_054497862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1646564-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647639-1647764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1665282-1665364:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X6
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLENDIVQLEKQLRGTEDTRDQVLEELHKSEDSLLSAEENAAKAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDQLYQQLEQNSRLTNELKLALNED
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646564..1646677,1647334..1647459,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1664036..1664109)
location: region:1646564-1664109:1
so has part: feature:1646564-1646677:1:exon
so has part: feature:1647334-1647459:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1664036-1664109:1:exon

XP_054497868.1
type: Protein
SIO_000068: ncbiprotein

position:1664109:1
position: 1664109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646564-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647334-1647459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1664036-1664109:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X5
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKATEDELDKYSESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDQLYQQLEQNSRLTNELKLALNED
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646564..1646677,1647639..1647764,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1664036..1664109)
location: region:1646564-1664109:1
so has part: feature:1646564-1646677:1:exon
so has part: feature:1647639-1647764:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1664036-1664109:1:exon

XP_054497867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1646564-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647639-1647764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1664036-1664109:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X13
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLENDIVQLEKQLRGTEDTRDQVLEELHKSEDSLLSAEENAAKAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDNFLCFSSPKTSSSGWIKHLSKLWMFHGLIVLSSSLVDSSSITCLRTCSVCALLYRNYISQCKINIPAVSLLLFLCLLFISVTI
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646564..1646677,1647334..1647459,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1660428..1660681)
location: region:1646564-1660681:1
so has part: feature:1646564-1646677:1:exon
so has part: feature:1647334-1647459:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1660428-1660681:1:exon

XP_054497875.1
type: Protein
SIO_000068: ncbiprotein

position:1660681:1
position: 1660681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646564-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647334-1647459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1660428-1660681:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X10
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKATEDELDKYSESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDNFLCFSSPKTSSSGWIKHLSKLWMFHGLIVLSSSLVDSSSITCLRTCSVCALLYRNYISQCKINIPAVSLLLFLCLLFISVTI
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646564..1646677,1647639..1647764,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1660428..1660681)
location: region:1646564-1660681:1
so has part: feature:1646564-1646677:1:exon
so has part: feature:1647639-1647764:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1660428-1660681:1:exon

XP_054497872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1646564-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647639-1647764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1660428-1660681:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X3
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKATEDELDKYSESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646564..1646677,1647639..1647764,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1658917..1658995,1660428..1660431)
location: region:1646564-1660431:1
so has part: feature:1646564-1646677:1:exon
so has part: feature:1647639-1647764:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1658917-1658995:1:exon
so has part: feature:1660428-1660431:1:exon

XP_054497865.1
type: Protein
SIO_000068: ncbiprotein

position:1660431:1
position: 1660431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1646564-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647639-1647764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1658917-1658995:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1660428-1660431:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X12
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLENDIVQLEKQLRGTEDTRDQVLEELHKSEDSLLSAEENAAKLEDELVALQKKLKATEDELDKYSESLKDAQEKLELADKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646564..1646677,1647334..1647459,1647639..1647764,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1658917..1658999)
location: region:1646564-1658999:1
so has part: feature:1646564-1646677:1:exon
so has part: feature:1647334-1647459:1:exon
so has part: feature:1647639-1647764:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1658917-1658999:1:exon

XP_054497874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1646564-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647334-1647459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1647639-1647764:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1658917-1658999:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X4
translation: MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLENDIVQLEKQLRGTEDTRDQVLEELHKSEDSLLSAEENAAKAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1646564..1646677,1647334..1647459,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1658917..1658999)
location: region:1646564-1658999:1
so has part: feature:1646564-1646677:1:exon
so has part: feature:1647334-1647459:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1658917-1658999:1:exon

XP_054497866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1646564-1646677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1647334-1647459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1658917-1658999:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TPM1
product: tropomyosin 1, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641896.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1649979..1650145,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1664036..1666225)
location: region:1649979-1666225:1
so has part: feature:1649979-1650145:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1664036-1666225:1:exon

position:1649979:1
position: 1649979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1649979-1650145:1:exon

position:1650145:1
position: 1650145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1664036-1666225:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TPM1
product: tropomyosin 1, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641894.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1649979..1650145,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1665282..1666225)
location: region:1649979-1666225:1
so has part: feature:1649979-1650145:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1665282-1666225:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1649979-1650145:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1665282-1666225:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TPM1
product: tropomyosin 1, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_054641901.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1649979..1650145,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1660428..1660694)
location: region:1649979-1660694:1
so has part: feature:1649979-1650145:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1660428-1660694:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1649979-1650145:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1660428-1660694:1:exon

TPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TPM1
product: tropomyosin 1, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641895.1
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1649979..1650145,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1658917..1658995,1660428..1660633)
location: region:1649979-1660633:1
so has part: feature:1649979-1650145:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1658917-1658995:1:exon
so has part: feature:1660428-1660633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1649979-1650145:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1658917-1658995:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1660428-1660633:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X7
translation: MAAMSSLEAVRRKIRSLQEQADAAEERAGRLQREVDQERALREEAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLNMHQMLDQTLLELNNM
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1650014..1650145,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1665282..1665364)
location: region:1650014-1665364:1
so has part: feature:1650014-1650145:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1665282-1665364:1:exon

XP_054497869.1
type: Protein
SIO_000068: ncbiprotein

position:1650014:1
position: 1650014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1650014-1650145:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1665282-1665364:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X9
translation: MAAMSSLEAVRRKIRSLQEQADAAEERAGRLQREVDQERALREEAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDQLYQQLEQNSRLTNELKLALNED
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1650014..1650145,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1664036..1664109)
location: region:1650014-1664109:1
so has part: feature:1650014-1650145:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1664036-1664109:1:exon

XP_054497871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1650014-1650145:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1664036-1664109:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X14
translation: MAAMSSLEAVRRKIRSLQEQADAAEERAGRLQREVDQERALREEAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDNFLCFSSPKTSSSGWIKHLSKLWMFHGLIVLSSSLVDSSSITCLRTCSVCALLYRNYISQCKINIPAVSLLLFLCLLFISVTI
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1650014..1650145,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1660428..1660681)
location: region:1650014-1660681:1
so has part: feature:1650014-1650145:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1660428-1660681:1:exon

XP_054497876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1650014-1650145:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1660428-1660681:1:exon

TPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-1 chain isoform X8
translation: MAAMSSLEAVRRKIRSLQEQADAAEERAGRLQREVDQERALREEAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAEERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM1
subclass of: SO_0000673
so part of: TPM1
location: join(1650014..1650145,1653859..1653992,1655186..1655303,1655753..1655823,1656638..1656713,1657261..1657323,1657574..1657643,1658917..1658995,1660428..1660431)
location: region:1650014-1660431:1
so has part: feature:1650014-1650145:1:exon
so has part: feature:1653859-1653992:1:exon
so has part: feature:1655186-1655303:1:exon
so has part: feature:1655753-1655823:1:exon
so has part: feature:1656638-1656713:1:exon
so has part: feature:1657261-1657323:1:exon
so has part: feature:1657574-1657643:1:exon
so has part: feature:1658917-1658995:1:exon
so has part: feature:1660428-1660431:1:exon

XP_054497870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1650014-1650145:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1653859-1653992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1655186-1655303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1655753-1655823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1656638-1656713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1657261-1657323:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1657574-1657643:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1658917-1658995:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1660428-1660431:1:exon

LACTB
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LACTB
note: lactamase beta; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1679202..1689533
location: region:1679202-1689533:1
so has part: feature:1679202-1689533:1:exon
subclass of: SO_0000010

129126289
type: Gene
SIO_000068: ncbigene

position:1679202:1
position: 1679202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1689533:1
position: 1689533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1679202-1689533:1:exon

LACTB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LACTB
product: lactamase beta
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642138.1
SIO_010081: LACTB
subclass of: SO_0000673
so part of: LACTB
location: join(1679202..1679447,1680316..1680382,1682091..1682281,1682619..1682964,1684273..1684438,1686654..1689533)
location: region:1679202-1689533:1
so has part: feature:1679202-1679447:1:exon
so has part: feature:1680316-1680382:1:exon
so has part: feature:1682091-1682281:1:exon
so has part: feature:1682619-1682964:1:exon
so has part: feature:1684273-1684438:1:exon
so has part: feature:1686654-1689533:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1679202-1679447:1:exon

position:1679447:1
position: 1679447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1680316-1680382:1:exon

position:1680316:1
position: 1680316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1680382:1
position: 1680382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1682091-1682281:1:exon

position:1682091:1
position: 1682091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682281:1
position: 1682281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1682619-1682964:1:exon

position:1682619:1
position: 1682619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682964:1
position: 1682964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1684273-1684438:1:exon

position:1684273:1
position: 1684273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684438:1
position: 1684438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1686654-1689533:1:exon

position:1686654:1
position: 1686654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LACTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LACTB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine beta-lactamase-like protein LACTB, mitochondrial
translation: MAGLARALRRAAAPGRLPPARRGGGGAGPRPWGWGLALGLALGVRAAPAGEEPESGREEKPPSPRGFGAAVERSRDLVRRIKDEAGIPGILVGVSVDGKEVWSEGLGYADVENRVLCKPETVMRIASISKCLTMMAAAKLWEEGKLDLDAPVQKYVPEFPEKVYEGEKVTITTRQLVSHLSGIRHYEKDITKVKEEKEKANRALKLTKSHQDKEQKAKEGKGTENTDCAKQKKEHDSETKSRNAKPGRNDKEFEQEEYYLKEKFESVIESLKIFKNDPLFFKPGSQFLYSTYGFTLLSAVVERASGQKFTDYMLKMFRDLDMLTTVLDDNEAMIYNRARCYIYNKKGRLVNAPYVDNSYKWAGGGFLSSVGDLLKFGNALLYSYQAGQFQNKNSKLLPGYLKPSTVAMMWTPVPKTEVSWDRDGKYAMAWAVVEKSQQCGCCRQQRHYASHTGGAVGASSVLLILPEELGPEAGGTWPGAPPRGVIVTIICNMQSVSLNSTALKIAREFEREKQAQCVG
SIO_010081: LACTB
subclass of: SO_0000673
so part of: LACTB
location: join(1679202..1679447,1680316..1680382,1682091..1682281,1682619..1682964,1684273..1684438,1686654..1687197)
location: region:1679202-1687197:1
so has part: feature:1679202-1679447:1:exon
so has part: feature:1680316-1680382:1:exon
so has part: feature:1682091-1682281:1:exon
so has part: feature:1682619-1682964:1:exon
so has part: feature:1684273-1684438:1:exon
so has part: feature:1686654-1687197:1:exon

XP_054498113.1
type: Protein
SIO_000068: ncbiprotein

position:1687197:1
position: 1687197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1679202-1679447:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1680316-1680382:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1682091-1682281:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1682619-1682964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684273-1684438:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1686654-1687197:1:exon

RPS27L
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: RPS27L
note: ribosomal protein S27 like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1690175..1694507)
location: region:1690175-1694507:-1
so has part: feature:1690175-1694507:-1:exon
subclass of: SO_0000010

129126290
type: Gene
SIO_000068: ncbigene

position:1690175:-1
position: 1690175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1694507:-1
position: 1694507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1690175-1694507:-1:exon

RPS27L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: RPS27L
product: ribosomal protein S27 like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642139.1
SIO_010081: RPS27L
subclass of: SO_0000673
so part of: RPS27L
location: complement(join(1690175..1690657,1691723..1691833,1694088..1694196,1694438..1694507))
location: region:1690175-1694507:-1
so has part: feature:1694438-1694507:-1:exon
so has part: feature:1694088-1694196:-1:exon
so has part: feature:1691723-1691833:-1:exon
so has part: feature:1690175-1690657:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1694438-1694507:-1:exon

position:1694438:-1
position: 1694438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1694088-1694196:-1:exon

position:1694088:-1
position: 1694088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1694196:-1
position: 1694196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1691723-1691833:-1:exon

position:1691723:-1
position: 1691723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1691833:-1
position: 1691833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1690175-1690657:-1:exon

position:1690657:-1
position: 1690657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS27L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: RPS27L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S27-like
translation: MPLAKDLVHPSLEDEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH
SIO_010081: RPS27L
subclass of: SO_0000673
so part of: RPS27L
location: complement(join(1690629..1690657,1691723..1691833,1694088..1694196,1694438..1694443))
location: region:1690629-1694443:-1
so has part: feature:1694438-1694443:-1:exon
so has part: feature:1694088-1694196:-1:exon
so has part: feature:1691723-1691833:-1:exon
so has part: feature:1690629-1690657:-1:exon

XP_054498114.1
type: Protein
SIO_000068: ncbiprotein

position:1690629:-1
position: 1690629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1694443:-1
position: 1694443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1694438-1694443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1694088-1694196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1691723-1691833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1690629-1690657:-1:exon

RAB8B
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: RAB8B
note: RAB8B, member RAS oncogene family; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1704889..1734563
location: region:1704889-1734563:1
so has part: feature:1704889-1734563:1:exon
subclass of: SO_0000010

129126101
type: Gene
SIO_000068: ncbigene

position:1704889:1
position: 1704889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1734563:1
position: 1734563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1704889-1734563:1:exon

RAB8B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: RAB8B
product: RAB8B, member RAS oncogene family, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641844.1
SIO_010081: RAB8B
subclass of: SO_0000673
so part of: RAB8B
location: join(1704889..1705075,1721121..1721181,1722242..1722302,1723722..1723799,1724192..1724281,1725094..1725159,1727616..1727666,1728140..1728164,1730513..1730585,1734374..1734563)
location: region:1704889-1734563:1
so has part: feature:1704889-1705075:1:exon
so has part: feature:1721121-1721181:1:exon
so has part: feature:1722242-1722302:1:exon
so has part: feature:1723722-1723799:1:exon
so has part: feature:1724192-1724281:1:exon
so has part: feature:1725094-1725159:1:exon
so has part: feature:1727616-1727666:1:exon
so has part: feature:1728140-1728164:1:exon
so has part: feature:1730513-1730585:1:exon
so has part: feature:1734374-1734563:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1704889-1705075:1:exon

position:1705075:1
position: 1705075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1721121-1721181:1:exon

position:1721121:1
position: 1721121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1721181:1
position: 1721181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1722242-1722302:1:exon

position:1722242:1
position: 1722242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1722302:1
position: 1722302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1723722-1723799:1:exon

position:1723722:1
position: 1723722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1723799:1
position: 1723799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1724192-1724281:1:exon

position:1724192:1
position: 1724192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1724281:1
position: 1724281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1725094-1725159:1:exon

position:1725094:1
position: 1725094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1725159:1
position: 1725159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1727616-1727666:1:exon

position:1727616:1
position: 1727616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1727666:1
position: 1727666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1728140-1728164:1:exon

position:1728140:1
position: 1728140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1728164:1
position: 1728164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1730513-1730585:1:exon

position:1730513:1
position: 1730513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1730585:1
position: 1730585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1734374-1734563:1:exon

position:1734374:1
position: 1734374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB8B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: RAB8B
product: RAB8B, member RAS oncogene family, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641843.1
SIO_010081: RAB8B
subclass of: SO_0000673
so part of: RAB8B
location: join(1704889..1705075,1721121..1721181,1722242..1722302,1723722..1723799,1724192..1724281,1725094..1725159,1727616..1727666,1728140..1728164,1730513..1732236)
location: region:1704889-1732236:1
so has part: feature:1704889-1705075:1:exon
so has part: feature:1721121-1721181:1:exon
so has part: feature:1722242-1722302:1:exon
so has part: feature:1723722-1723799:1:exon
so has part: feature:1724192-1724281:1:exon
so has part: feature:1725094-1725159:1:exon
so has part: feature:1727616-1727666:1:exon
so has part: feature:1728140-1728164:1:exon
so has part: feature:1730513-1732236:1:exon

position:1732236:1
position: 1732236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1704889-1705075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1721121-1721181:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1722242-1722302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1723722-1723799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1724192-1724281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1725094-1725159:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1727616-1727666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728140-1728164:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1730513-1732236:1:exon

RAB8B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: RAB8B
product: RAB8B, member RAS oncogene family, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641842.1
SIO_010081: RAB8B
subclass of: SO_0000673
so part of: RAB8B
location: join(1704890..1705075,1721121..1721181,1722242..1722302,1723722..1723799,1724192..1724281,1725094..1725159,1727616..1727666,1728140..1732236)
location: region:1704890-1732236:1
so has part: feature:1704890-1705075:1:exon
so has part: feature:1721121-1721181:1:exon
so has part: feature:1722242-1722302:1:exon
so has part: feature:1723722-1723799:1:exon
so has part: feature:1724192-1724281:1:exon
so has part: feature:1725094-1725159:1:exon
so has part: feature:1727616-1727666:1:exon
so has part: feature:1728140-1732236:1:exon

position:1704890:1
position: 1704890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1704890-1705075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1721121-1721181:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1722242-1722302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1723722-1723799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1724192-1724281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1725094-1725159:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1727616-1727666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728140-1732236:1:exon

RAB8B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: RAB8B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-8B isoform X2
translation: MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKLNRKMNDNSSSGAEEFNAILLSSAETEEF
SIO_010081: RAB8B
subclass of: SO_0000673
so part of: RAB8B
location: join(1704952..1705075,1721121..1721181,1722242..1722302,1723722..1723799,1724192..1724281,1725094..1725159,1727616..1727666,1728140..1728164,1730513..1730562)
location: region:1704952-1730562:1
so has part: feature:1704952-1705075:1:exon
so has part: feature:1721121-1721181:1:exon
so has part: feature:1722242-1722302:1:exon
so has part: feature:1723722-1723799:1:exon
so has part: feature:1724192-1724281:1:exon
so has part: feature:1725094-1725159:1:exon
so has part: feature:1727616-1727666:1:exon
so has part: feature:1728140-1728164:1:exon
so has part: feature:1730513-1730562:1:exon

XP_054497818.1
type: Protein
SIO_000068: ncbiprotein

position:1704952:1
position: 1704952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1730562:1
position: 1730562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1704952-1705075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1721121-1721181:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1722242-1722302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1723722-1723799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1724192-1724281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1725094-1725159:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1727616-1727666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728140-1728164:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1730513-1730562:1:exon

RAB8B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: RAB8B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-8B isoform X2
translation: MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKLNRKMNDNSSSGAEEFNAILLSSAETEEF
SIO_010081: RAB8B
subclass of: SO_0000673
so part of: RAB8B
location: join(1704952..1705075,1721121..1721181,1722242..1722302,1723722..1723799,1724192..1724281,1725094..1725159,1727616..1727666,1728140..1728164,1730513..1730562)
location: region:1704952-1730562:1
so has part: feature:1704952-1705075:1:exon
so has part: feature:1721121-1721181:1:exon
so has part: feature:1722242-1722302:1:exon
so has part: feature:1723722-1723799:1:exon
so has part: feature:1724192-1724281:1:exon
so has part: feature:1725094-1725159:1:exon
so has part: feature:1727616-1727666:1:exon
so has part: feature:1728140-1728164:1:exon
so has part: feature:1730513-1730562:1:exon

XP_054497819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1704952-1705075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1721121-1721181:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1722242-1722302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1723722-1723799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1724192-1724281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1725094-1725159:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1727616-1727666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728140-1728164:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1730513-1730562:1:exon

RAB8B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: RAB8B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-8B isoform X1
translation: MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKLNRKMNDNSSSGAGGPVKITENRSKKSSFFRCTLL
SIO_010081: RAB8B
subclass of: SO_0000673
so part of: RAB8B
location: join(1704952..1705075,1721121..1721181,1722242..1722302,1723722..1723799,1724192..1724281,1725094..1725159,1727616..1727666,1728140..1728232)
location: region:1704952-1728232:1
so has part: feature:1704952-1705075:1:exon
so has part: feature:1721121-1721181:1:exon
so has part: feature:1722242-1722302:1:exon
so has part: feature:1723722-1723799:1:exon
so has part: feature:1724192-1724281:1:exon
so has part: feature:1725094-1725159:1:exon
so has part: feature:1727616-1727666:1:exon
so has part: feature:1728140-1728232:1:exon

XP_054497817.1
type: Protein
SIO_000068: ncbiprotein

position:1728232:1
position: 1728232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1704952-1705075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1721121-1721181:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1722242-1722302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1723722-1723799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1724192-1724281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1725094-1725159:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1727616-1727666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1728140-1728232:1:exon

TRNAG-UCC
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: TRNAG-UCC
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1742891..1742962
location: region:1742891-1742962:1
so has part: feature:1742891-1742962:1:exon
subclass of: SO_0000663

129126533
type: Gene
SIO_000068: ncbigene

position:1742891:1
position: 1742891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1742962:1
position: 1742962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1742891-1742962:1:exon

TRNAG-UCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
gene: TRNAG-UCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1742924..1742926,aa:Gly,seq:tcc)
SIO_010081: TRNAG-UCC
subclass of: SO_0000673
so part of: TRNAG-UCC
location: 1742891..1742962
location: region:1742891-1742962:1
so has part: feature:1742891-1742962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1742891-1742962:1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: TRNAM-CAU
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1745798..1745869
location: region:1745798-1745869:1
so has part: feature:1745798-1745869:1:exon
subclass of: SO_0000663

129126538
type: Gene
SIO_000068: ncbigene

position:1745798:1
position: 1745798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1745869:1
position: 1745869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1745798-1745869:1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1745830..1745832,aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: 1745798..1745869
location: region:1745798-1745869:1
so has part: feature:1745798-1745869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1745798-1745869:1:exon

TRNAI-AAU
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: TRNAI-AAU
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1745948..1746021
location: region:1745948-1746021:1
so has part: feature:1745948-1746021:1:exon
subclass of: SO_0000663

129126539
type: Gene
SIO_000068: ncbigene

position:1745948:1
position: 1745948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1746021:1
position: 1746021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1745948-1746021:1:exon

TRNAI-AAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
gene: TRNAI-AAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1745982..1745984,aa:Ile,seq:aat)
SIO_010081: TRNAI-AAU
subclass of: SO_0000673
so part of: TRNAI-AAU
location: 1745948..1746021
location: region:1745948-1746021:1
so has part: feature:1745948-1746021:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1745948-1746021:1:exon

LOC129126151
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129126151
note: mitotic-spindle organizing protein 2B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1748417..1756267)
location: region:1748417-1756267:-1
so has part: feature:1748417-1756267:-1:exon
subclass of: SO_0000010

129126151
type: Gene
SIO_000068: ncbigene

position:1748417:-1
position: 1748417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756267:-1
position: 1756267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748417-1756267:-1:exon

LOC129126151
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129126151
product: mitotic-spindle organizing protein 2B-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641943.1
SIO_010081: LOC129126151
subclass of: SO_0000673
so part of: LOC129126151
location: complement(join(1748417..1748690,1755881..1756023,1756107..1756267))
location: region:1748417-1756267:-1
so has part: feature:1756107-1756267:-1:exon
so has part: feature:1755881-1756023:-1:exon
so has part: feature:1748417-1748690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1756107-1756267:-1:exon

position:1756107:-1
position: 1756107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1755881-1756023:-1:exon

position:1755881:-1
position: 1755881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756023:-1
position: 1756023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1748417-1748690:-1:exon

position:1748690:-1
position: 1748690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC129126151
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129126151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitotic-spindle organizing protein 2B-like
translation: MSEGPAGMAAPAAMAETRLRRKQLLSAEEAELFELAQAAGSGLDPEVFRVLLDLLRMNVAPLAVFQVLKSMCAGQRLPPAAESGPAAPAPIPADSRGRNKSSSAVGGSQILAERSSREGSAQRMPRQPSASRGQKAAASGKSSGGGNSA
SIO_010081: LOC129126151
subclass of: SO_0000673
so part of: LOC129126151
location: complement(join(1748530..1748690,1755881..1756023,1756107..1756252))
location: region:1748530-1756252:-1
so has part: feature:1756107-1756252:-1:exon
so has part: feature:1755881-1756023:-1:exon
so has part: feature:1748530-1748690:-1:exon

XP_054497918.1
type: Protein
SIO_000068: ncbiprotein

position:1748530:-1
position: 1748530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756252:-1
position: 1756252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1756107-1756252:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1755881-1756023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1748530-1748690:-1:exon

SHF
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: SHF
note: Src homology 2 domain containing F; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1762031..1779895)
location: region:1762031-1779895:-1
so has part: feature:1762031-1779895:-1:exon
subclass of: SO_0000010

129126348
type: Gene
SIO_000068: ncbigene

position:1762031:-1
position: 1762031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1779895:-1
position: 1779895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1762031-1779895:-1:exon

SHF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: SHF
product: Src homology 2 domain containing F, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642226.1
SIO_010081: SHF
subclass of: SO_0000673
so part of: SHF
location: complement(join(1762031..1762834,1765908..1766027,1766790..1766961,1771407..1771616,1772552..1772681,1779440..1779895))
location: region:1762031-1779895:-1
so has part: feature:1779440-1779895:-1:exon
so has part: feature:1772552-1772681:-1:exon
so has part: feature:1771407-1771616:-1:exon
so has part: feature:1766790-1766961:-1:exon
so has part: feature:1765908-1766027:-1:exon
so has part: feature:1762031-1762834:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1779440-1779895:-1:exon

position:1779440:-1
position: 1779440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1772552-1772681:-1:exon

position:1772552:-1
position: 1772552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1772681:-1
position: 1772681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1771407-1771616:-1:exon

position:1771407:-1
position: 1771407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1771616:-1
position: 1771616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1766790-1766961:-1:exon

position:1766790:-1
position: 1766790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1766961:-1
position: 1766961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1765908-1766027:-1:exon

position:1765908:-1
position: 1765908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1766027:-1
position: 1766027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1762031-1762834:-1:exon

position:1762834:-1
position: 1762834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SHF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: SHF
product: Src homology 2 domain containing F, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642225.1
SIO_010081: SHF
subclass of: SO_0000673
so part of: SHF
location: complement(join(1762031..1762834,1765908..1766027,1766790..1766961,1769740..1769868,1771407..1771616,1772552..1772681,1779440..1779895))
location: region:1762031-1779895:-1
so has part: feature:1779440-1779895:-1:exon
so has part: feature:1772552-1772681:-1:exon
so has part: feature:1771407-1771616:-1:exon
so has part: feature:1769740-1769868:-1:exon
so has part: feature:1766790-1766961:-1:exon
so has part: feature:1765908-1766027:-1:exon
so has part: feature:1762031-1762834:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1779440-1779895:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1772552-1772681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1771407-1771616:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1769740-1769868:-1:exon

position:1769740:-1
position: 1769740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1769868:-1
position: 1769868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1766790-1766961:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1765908-1766027:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1762031-1762834:-1:exon

SHF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: SHF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing adapter protein F isoform X2
translation: MARWLREHLGFRSARPAPPAPPKPDYRAGPPPQPPLPPGGAAEPLAAAQPDIVAAYRLQKERDFEDPYSGPPPAAAPDGPRYVSPKHRLIKVEAVEKVPASPSPPPPVPAAPSSPPAGPEPPDEPPQELAVLEDYADPFDAAQVAGSQAGLEKVMENDGYMEPYEAQKMMAEIRQKGLREAPARPLPLYDTPYEPVLDMDSDCSACPRPRESRLPEDDERPPEEYDQPWEWKKERISKAFAGPSEGLGYGRTSPCREEKARAVLRHGSSSLKNTKTLTAEPGPFVGERIDPALPLESQCWYHGAISRTDAETLLRLCKEASYLVRNSETSKNDFSLSLKSSQGFMHMKLSRTQENKYVLGQHSPPFDSVPEIIHHYASRKLPIKGAEHMSLLYPVAIRTL
SIO_010081: SHF
subclass of: SO_0000673
so part of: SHF
location: complement(join(1762648..1762834,1765908..1766027,1766790..1766961,1771407..1771616,1772552..1772681,1779440..1779823))
location: region:1762648-1779823:-1
so has part: feature:1779440-1779823:-1:exon
so has part: feature:1772552-1772681:-1:exon
so has part: feature:1771407-1771616:-1:exon
so has part: feature:1766790-1766961:-1:exon
so has part: feature:1765908-1766027:-1:exon
so has part: feature:1762648-1762834:-1:exon

XP_054498201.1
type: Protein
SIO_000068: ncbiprotein

position:1762648:-1
position: 1762648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1779823:-1
position: 1779823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1779440-1779823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1772552-1772681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1771407-1771616:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1766790-1766961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1765908-1766027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1762648-1762834:-1:exon

SHF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: SHF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing adapter protein F isoform X1
translation: MARWLREHLGFRSARPAPPAPPKPDYRAGPPPQPPLPPGGAAEPLAAAQPDIVAAYRLQKERDFEDPYSGPPPAAAPDGPRYVSPKHRLIKVEAVEKVPASPSPPPPVPAAPSSPPAGPEPPDEPPQELAVLEDYADPFDAAQVAGSQAGLEKVMENDGYMEPYEAQKMMAEIRQKGLREAPARPLPLYDTPYEPVLDMDSDCSACPRPRESRLPEDDERPPEEYDQPWEWKKERISKAFAVEIKVIKDLPWPPPVGQLDSSESPPDGEPGAPLPAQHSYEDANGPSEGLGYGRTSPCREEKARAVLRHGSSSLKNTKTLTAEPGPFVGERIDPALPLESQCWYHGAISRTDAETLLRLCKEASYLVRNSETSKNDFSLSLKSSQGFMHMKLSRTQENKYVLGQHSPPFDSVPEIIHHYASRKLPIKGAEHMSLLYPVAIRTL
SIO_010081: SHF
subclass of: SO_0000673
so part of: SHF
location: complement(join(1762648..1762834,1765908..1766027,1766790..1766961,1769740..1769868,1771407..1771616,1772552..1772681,1779440..1779823))
location: region:1762648-1779823:-1
so has part: feature:1779440-1779823:-1:exon
so has part: feature:1772552-1772681:-1:exon
so has part: feature:1771407-1771616:-1:exon
so has part: feature:1769740-1769868:-1:exon
so has part: feature:1766790-1766961:-1:exon
so has part: feature:1765908-1766027:-1:exon
so has part: feature:1762648-1762834:-1:exon

XP_054498200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1779440-1779823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1772552-1772681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1771407-1771616:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1769740-1769868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1766790-1766961:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1765908-1766027:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1762648-1762834:-1:exon

TRNAH-GUG
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: TRNAH-GUG
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1790619..1790690
location: region:1790619-1790690:1
so has part: feature:1790619-1790690:1:exon
subclass of: SO_0000663

129126540
type: Gene
SIO_000068: ncbigene

position:1790619:1
position: 1790619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1790690:1
position: 1790690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1790619-1790690:1:exon

TRNAH-GUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
gene: TRNAH-GUG
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1790652..1790654,aa:His,seq:gtg)
SIO_010081: TRNAH-GUG
subclass of: SO_0000673
so part of: TRNAH-GUG
location: 1790619..1790690
location: region:1790619-1790690:1
so has part: feature:1790619-1790690:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1790619-1790690:1:exon

TRNAH-GUG
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: TRNAH-GUG
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1791614..1791685)
location: region:1791614-1791685:-1
so has part: feature:1791614-1791685:-1:exon
subclass of: SO_0000663

129126541
type: Gene
SIO_000068: ncbigene

position:1791614:-1
position: 1791614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1791685:-1
position: 1791685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1791614-1791685:-1:exon

TRNAH-GUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
gene: TRNAH-GUG
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1791650..1791652),aa:His, seq:gtg)
SIO_010081: TRNAH-GUG
subclass of: SO_0000673
so part of: TRNAH-GUG
location: complement(1791614..1791685)
location: region:1791614-1791685:-1
so has part: feature:1791614-1791685:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1791614-1791685:-1:exon

LOC129126301
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129126301
note: sodium/nucleoside cotransporter 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1792767..1803119
location: region:1792767-1803119:1
so has part: feature:1792767-1803119:1:exon
subclass of: SO_0000010

129126301
type: Gene
SIO_000068: ncbigene

position:1792767:1
position: 1792767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1803119:1
position: 1803119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1792767-1803119:1:exon

LOC129126301
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129126301
product: sodium/nucleoside cotransporter 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
transcript id: XM_054642162.1
SIO_010081: LOC129126301
subclass of: SO_0000673
so part of: LOC129126301
location: join(1792767..1792794,1793602..1793724,1794911..1795037,1795165..1795259,1795595..1795686,1796071..1796260,1796577..1796718,1797457..1797570,1797934..1798011,1798352..1798432,1798766..1798846,1798996..1799121,1800309..1800439,1800626..1800794,1800970..1801167,1801637..1801718,1802193..1802291,1802730..1802841,1802935..1803119)
location: region:1792767-1803119:1
so has part: feature:1792767-1792794:1:exon
so has part: feature:1793602-1793724:1:exon
so has part: feature:1794911-1795037:1:exon
so has part: feature:1795165-1795259:1:exon
so has part: feature:1795595-1795686:1:exon
so has part: feature:1796071-1796260:1:exon
so has part: feature:1796577-1796718:1:exon
so has part: feature:1797457-1797570:1:exon
so has part: feature:1797934-1798011:1:exon
so has part: feature:1798352-1798432:1:exon
so has part: feature:1798766-1798846:1:exon
so has part: feature:1798996-1799121:1:exon
so has part: feature:1800309-1800439:1:exon
so has part: feature:1800626-1800794:1:exon
so has part: feature:1800970-1801167:1:exon
so has part: feature:1801637-1801718:1:exon
so has part: feature:1802193-1802291:1:exon
so has part: feature:1802730-1802841:1:exon
so has part: feature:1802935-1803119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1792767-1792794:1:exon

position:1792794:1
position: 1792794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1793602-1793724:1:exon

position:1793602:1
position: 1793602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1793724:1
position: 1793724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1794911-1795037:1:exon

position:1794911:1
position: 1794911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1795037:1
position: 1795037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1795165-1795259:1:exon

position:1795165:1
position: 1795165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1795259:1
position: 1795259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1795595-1795686:1:exon

position:1795595:1
position: 1795595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1795686:1
position: 1795686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1796071-1796260:1:exon

position:1796071:1
position: 1796071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1796260:1
position: 1796260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1796577-1796718:1:exon

position:1796577:1
position: 1796577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1796718:1
position: 1796718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1797457-1797570:1:exon

position:1797457:1
position: 1797457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1797570:1
position: 1797570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1797934-1798011:1:exon

position:1797934:1
position: 1797934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1798011:1
position: 1798011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1798352-1798432:1:exon

position:1798352:1
position: 1798352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1798432:1
position: 1798432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1798766-1798846:1:exon

position:1798766:1
position: 1798766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1798846:1
position: 1798846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1798996-1799121:1:exon

position:1798996:1
position: 1798996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799121:1
position: 1799121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1800309-1800439:1:exon

position:1800309:1
position: 1800309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1800439:1
position: 1800439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1800626-1800794:1:exon

position:1800626:1
position: 1800626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1800794:1
position: 1800794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1800970-1801167:1:exon

position:1800970:1
position: 1800970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1801167:1
position: 1801167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1801637-1801718:1:exon

position:1801637:1
position: 1801637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1801718:1
position: 1801718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1802193-1802291:1:exon

position:1802193:1
position: 1802193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1802291:1
position: 1802291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1802730-1802841:1:exon

position:1802730:1
position: 1802730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1802841:1
position: 1802841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1802935-1803119:1:exon

position:1802935:1
position: 1802935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC129126301
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129126301
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/nucleoside cotransporter 1-like
translation: MEGNQITLDSLDKGTDNPAFSFEGENRHYEECGGLHSENQEERREGKGRFSSYCRKALQPASKTQHFCKAHAKVLRRVVLGLLAVAYLCYFIAACYLNFQRALALVVITAVVVFFICWEVFQKHCGAKVLLLLRPVGKCFQKAWPWLKWLLWVALLAGLIVWLALDTGRNPEQLISLGGFCFLVLFLFACSKHHGAVSWRAVFWGLGLEFLLGLFVLRTTPGTQAFQWLGDQVQYFLGYTTAGSSFVFGNTLIEEVFAFQSLPIIVFFSCVTSILYYLGVMQWVILKISWVLQVSMATTATETLSVAGNIFVGQSEAPLLIRPYLADMTLSEIHAVMTGGFSTIAGSVMGAYISFGIDAASLIAASVMAAPCALGMAKLVYPEVEESKFKGRASIRISRGEEQNILEAASSGAANSVGLVANIAANLIAFLAVLEFINAALRWFGEMVDIEGLTFQVICSYVLMPLAFLMGADWADSPVVAELLGIKIFLNEFVAYQQLATYKKNRLMGLEEWDGSRKQWISERAESITTFALCGFANFSSIGITLGALSSIAPQRKGDFASVVLRALLTGMCVSMLNACLAGLLHVPTEVGDCAMFFSTTNFSSTSYTMYTCCKQLFASSVLQNGTLSFTGSWAEQAESVLWLQECCAHYNHTSCAWTF
SIO_010081: LOC129126301
subclass of: SO_0000673
so part of: LOC129126301
location: join(1794969..1795037,1795165..1795259,1795595..1795686,1796071..1796260,1796577..1796718,1797457..1797570,1797934..1798011,1798352..1798432,1798766..1798846,1798996..1799121,1800309..1800439,1800626..1800794,1800970..1801167,1801637..1801718,1802193..1802291,1802730..1802841,1802935..1803058)
location: region:1794969-1803058:1
so has part: feature:1794969-1795037:1:exon
so has part: feature:1795165-1795259:1:exon
so has part: feature:1795595-1795686:1:exon
so has part: feature:1796071-1796260:1:exon
so has part: feature:1796577-1796718:1:exon
so has part: feature:1797457-1797570:1:exon
so has part: feature:1797934-1798011:1:exon
so has part: feature:1798352-1798432:1:exon
so has part: feature:1798766-1798846:1:exon
so has part: feature:1798996-1799121:1:exon
so has part: feature:1800309-1800439:1:exon
so has part: feature:1800626-1800794:1:exon
so has part: feature:1800970-1801167:1:exon
so has part: feature:1801637-1801718:1:exon
so has part: feature:1802193-1802291:1:exon
so has part: feature:1802730-1802841:1:exon
so has part: feature:1802935-1803058:1:exon

XP_054498137.1
type: Protein
SIO_000068: ncbiprotein

position:1794969:1
position: 1794969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1803058:1
position: 1803058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1794969-1795037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1795165-1795259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1795595-1795686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1796071-1796260:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1796577-1796718:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1797457-1797570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1797934-1798011:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1798352-1798432:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1798766-1798846:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1798996-1799121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1800309-1800439:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1800626-1800794:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1800970-1801167:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1801637-1801718:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1802193-1802291:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1802730-1802841:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1802935-1803058:1:exon

ALPK3
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: ALPK3
note: alpha kinase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1804755..1836156)
location: region:1804755-1836156:-1
so has part: feature:1804755-1836156:-1:exon
subclass of: SO_0000010

129126466
type: Gene
SIO_000068: ncbigene

position:1804755:-1
position: 1804755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1836156:-1
position: 1836156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1804755-1836156:-1:exon

ALPK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: ALPK3
product: alpha kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_054642386.1
SIO_010081: ALPK3
subclass of: SO_0000673
so part of: ALPK3
location: complement(join(1804755..1805076,1805227..1805275,1805476..1805693,1805929..1806017,1806344..1806618,1806736..1806771,1807031..1807158,1808205..1808352,1809208..1811050,1814572..1815571,1816575..1816692,1823138..1823259,1826443..1826481,1835978..1836156))
location: region:1804755-1836156:-1
so has part: feature:1835978-1836156:-1:exon
so has part: feature:1826443-1826481:-1:exon
so has part: feature:1823138-1823259:-1:exon
so has part: feature:1816575-1816692:-1:exon
so has part: feature:1814572-1815571:-1:exon
so has part: feature:1809208-1811050:-1:exon
so has part: feature:1808205-1808352:-1:exon
so has part: feature:1807031-1807158:-1:exon
so has part: feature:1806736-1806771:-1:exon
so has part: feature:1806344-1806618:-1:exon
so has part: feature:1805929-1806017:-1:exon
so has part: feature:1805476-1805693:-1:exon
so has part: feature:1805227-1805275:-1:exon
so has part: feature:1804755-1805076:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1835978-1836156:-1:exon

position:1835978:-1
position: 1835978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1826443-1826481:-1:exon

position:1826443:-1
position: 1826443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1826481:-1
position: 1826481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1823138-1823259:-1:exon

position:1823138:-1
position: 1823138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1823259:-1
position: 1823259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1816575-1816692:-1:exon

position:1816575:-1
position: 1816575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1816692:-1
position: 1816692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1814572-1815571:-1:exon

position:1814572:-1
position: 1814572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1815571:-1
position: 1815571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1809208-1811050:-1:exon

position:1809208:-1
position: 1809208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1811050:-1
position: 1811050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1808205-1808352:-1:exon

position:1808205:-1
position: 1808205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808352:-1
position: 1808352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1807031-1807158:-1:exon

position:1807031:-1
position: 1807031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1807158:-1
position: 1807158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1806736-1806771:-1:exon

position:1806736:-1
position: 1806736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1806771:-1
position: 1806771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1806344-1806618:-1:exon

position:1806344:-1
position: 1806344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1806618:-1
position: 1806618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1805929-1806017:-1:exon

position:1805929:-1
position: 1805929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1806017:-1
position: 1806017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1805476-1805693:-1:exon

position:1805476:-1
position: 1805476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1805693:-1
position: 1805693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1805227-1805275:-1:exon

position:1805227:-1
position: 1805227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1805275:-1
position: 1805275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1804755-1805076:-1:exon

position:1805076:-1
position: 1805076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ALPK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ALPK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-protein kinase 3
translation: MSSTRRALAGLYGRGTSHIDGAEEAESAAWASRPDRRSYLLGIRPQNSLSSSRFSPSSLGRSTFCAIISQLTEETQPLFETTIKSRAVSEDSDAKFTCIVTGYPQPEVTWYKDDEEMDRYCGLPKYEIFRHGNRHTLQLYKCREEDAGIYQASARNNKGIVSCSGVLEVGTMTEFKIHQKWFDKIKRKAEEKMQEIEQGKKRGKENVEVEKLQGMSPERLQRKRRLARDQNLRSGDSSWEKEDTAKVHVADSQSRLHKDIAETKEQPLSAVPGFPNKLVAPLKAEVTTNGDATLESGEENGNNFLTYIYETVEDLATKPGAKDSAAKKKKKVEAPSAPKQEVSKREESGRDRANQSSNPRFAPPVPLRRNARLRAASDQEVETSPKLKEPGKAVKQDIKPNDDMYFSLKDMYFDKQVKPAAGKEEVGAKDEAGSQAPLQPVAASRQTEDAPLPSEVLEGQRGQQPEQKLEGNKEVAARVGQSPGDLKHPVSSPTKETSQQASKLEEVRKEVPACQETRGAVKRTNPRFRPQEPPKPPARSPDHVQSGKEHPPPRKQAGRHSHALEDRETQQGLLNQENKSQGGEESLLKNLTPLEPGENTPLEQIPCQTVKDGKSKEAGAEVSGSHPGVRTGGSEAAEPCLGAVHREAAGTPLGHQNTQNETAAPASVPLAKEEPLPAPAVRPSGAQEALLASHRSPGMEATAGEVPSGAQLLPPARGEAEITTTGGSAPRETFSAITSEDENAKPVPMGPQGKEGGLLTATAPCQEPAASSGTWEGVSEVQPQVPLVLPGSERSQEMSVEEKMQHKNLVSSLKNYLLLLLKMSDSSKDATKGDTDSGDTEQPNAGEGMIPEIGIAGLSPRTSRKVLEKVQNNQLFQTAENLPLTPRTSRRITGMINEEFVTSQEMLACRPVPPKRRTWAAPEAEGPPPLSVPSIVVGSMPTAGVAPHLSDLPPVSSEESPADPLAALPCATPEELALGARRKIYLPKPKQVGVEEEAAPESLGHTRSPTVSPRQSRKNASLLHSPAPAPSSPSEQCSPTLTRKMATLEVPKLYEEPAGDTSGDKEVPGDAKPEAQPAESQSTNNPFKAPQVVRKIRAEQFSDASGNLKLWCQFFNILSDSKLTWYKDEIPVAEAQRSAGDEGQAALAVVQASQKDCGVYRCVISNEYGTDSTDFLLSPEVLSGFILREEIEVGEEIEMTPMVFAKGLADAGYWGDKLFGRVVSEDLEVGAGFLRKACRARAIYGLEPVFESGHTCVIKVHNFIVFGTKNENSLVEKNYDITIQECKVQNSSREYCKIFAAEARAVPDFGAVPEIIPLYLIYRPANNIPYATMEEDLGRPCEQYCVTERDGSLVARGTSEIVLKCCTFQHWVYQWTNGNILVTDMEGVGWKLTNVRIATNLKGYQGLKESCFPSLLEQFPAAHKCNHYCNILGLKMLEPAKPKGSKSPCLGRKSAQSSPQLQKKVLTSPQSTRKASVSPKSSRRAAETGEASTACKPRSGESNRAGCPQ
SIO_010081: ALPK3
subclass of: SO_0000673
so part of: ALPK3
location: complement(join(1804755..1805076,1805227..1805275,1805476..1805693,1805929..1806017,1806344..1806618,1806736..1806771,1807031..1807158,1808205..1808352,1809208..1811050,1814572..1815571,1816575..1816692,1823138..1823259,1826443..1826481,1835978..1836120))
location: region:1804755-1836120:-1
so has part: feature:1835978-1836120:-1:exon
so has part: feature:1826443-1826481:-1:exon
so has part: feature:1823138-1823259:-1:exon
so has part: feature:1816575-1816692:-1:exon
so has part: feature:1814572-1815571:-1:exon
so has part: feature:1809208-1811050:-1:exon
so has part: feature:1808205-1808352:-1:exon
so has part: feature:1807031-1807158:-1:exon
so has part: feature:1806736-1806771:-1:exon
so has part: feature:1806344-1806618:-1:exon
so has part: feature:1805929-1806017:-1:exon
so has part: feature:1805476-1805693:-1:exon
so has part: feature:1805227-1805275:-1:exon
so has part: feature:1804755-1805076:-1:exon

XP_054498361.1
type: Protein
SIO_000068: ncbiprotein

position:1836120:-1
position: 1836120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1835978-1836120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1826443-1826481:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1823138-1823259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1816575-1816692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1814572-1815571:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1809208-1811050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1808205-1808352:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1807031-1807158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1806736-1806771:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1806344-1806618:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1805929-1806017:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1805476-1805693:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1805227-1805275:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1804755-1805076:-1:exon

LOC129126328
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129126328
note: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1840779..1865444
location: region:1840779-1865444:1
so has part: feature:1840779-1865444:1:exon
subclass of: SO_0000010

129126328
type: Gene
SIO_000068: ncbigene

position:1840779:1
position: 1840779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1865444:1
position: 1865444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1840779-1865444:1:exon

LOC129126328
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: LOC129126328
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_054642205.1
SIO_010081: LOC129126328
subclass of: SO_0000673
so part of: LOC129126328
location: join(1840779..1840794,1841809..1841903,1842270..1842388,1842569..1842722,1843192..1843370,1844298..1844394,1845990..1846016,1846754..1846957,1851186..1851363,1854793..1854867,1855460..1855587,1855802..1855933,1856058..1856206,1860641..1860766,1863362..1865444)
location: region:1840779-1865444:1
so has part: feature:1840779-1840794:1:exon
so has part: feature:1841809-1841903:1:exon
so has part: feature:1842270-1842388:1:exon
so has part: feature:1842569-1842722:1:exon
so has part: feature:1843192-1843370:1:exon
so has part: feature:1844298-1844394:1:exon
so has part: feature:1845990-1846016:1:exon
so has part: feature:1846754-1846957:1:exon
so has part: feature:1851186-1851363:1:exon
so has part: feature:1854793-1854867:1:exon
so has part: feature:1855460-1855587:1:exon
so has part: feature:1855802-1855933:1:exon
so has part: feature:1856058-1856206:1:exon
so has part: feature:1860641-1860766:1:exon
so has part: feature:1863362-1865444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1840779-1840794:1:exon

position:1840794:1
position: 1840794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1841809-1841903:1:exon

position:1841809:1
position: 1841809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1841903:1
position: 1841903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1842270-1842388:1:exon

position:1842270:1
position: 1842270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1842388:1
position: 1842388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1842569-1842722:1:exon

position:1842569:1
position: 1842569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1842722:1
position: 1842722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1843192-1843370:1:exon

position:1843192:1
position: 1843192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1843370:1
position: 1843370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1844298-1844394:1:exon

position:1844298:1
position: 1844298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1844394:1
position: 1844394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1845990-1846016:1:exon

position:1845990:1
position: 1845990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1846016:1
position: 1846016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1846754-1846957:1:exon

position:1846754:1
position: 1846754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1846957:1
position: 1846957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1851186-1851363:1:exon

position:1851186:1
position: 1851186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1851363:1
position: 1851363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1854793-1854867:1:exon

position:1854793:1
position: 1854793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1854867:1
position: 1854867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1855460-1855587:1:exon

position:1855460:1
position: 1855460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1855587:1
position: 1855587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1855802-1855933:1:exon

position:1855802:1
position: 1855802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1855933:1
position: 1855933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1856058-1856206:1:exon

position:1856058:1
position: 1856058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1856206:1
position: 1856206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1860641-1860766:1:exon

position:1860641:1
position: 1860641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1860766:1
position: 1860766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1863362-1865444:1:exon

position:1863362:1
position: 1863362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC129126328
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: LOC129126328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like
translation: MQEAITITEQPVSVSVPVGYSFTLRCRAQGRSSLQYQWFCQYQSDCRLIPGAINQDLPIIAEQTQLYTCRVNDLHRNAVFSDWVKVEVHQCVARGLPPRLWQGEPVIVLNPQEQRVEVGQPLQLQCAAMGVPAPSYQWYRNGNLLEQQKRKKLQITHTRLSDSGTYLCCASNSHGEHWSSAVDVHIGPCGSGKFFATGKIALLVGNNRYQHHPNLMAPVRDVFELRHLLEHLGFQVVSLLDLNKAEMATAVTQFLQLLGKGVYAIFYYAGHGYEHLGRNYMVPVDAPQPYAPENCISVQRILQKMQQQQTALNIILLDTCRKWYNPGRALSQVQPLEPWGNTVYGYSTSEDAEAFELQDGEFSSGIFMKYLKKHILQEKKVTHMLEDVLEDLGRDPLVTGKQVMEIKHTLKEARSLTDPICPSGAAAERWGHGQELPSRTVTFPCGLRVQLRFLRLFSNLMFVCAKPLAPLAHITEPQLLLHQLDTDAVAIQRESCLDHVETLLASVYKREELDCIFQLCALQKIQTDVVLQLDLHYTQPSTNQRTCESLQTTLQKSLLRQFVSQRKDSQPAPARVCPQGALGLGTEPKGSLGTGSGHSLPSSSPSTFSSEPEENDESELALPGLGQDRP
SIO_010081: LOC129126328
subclass of: SO_0000673
so part of: LOC129126328
location: join(1841894..1841903,1842270..1842388,1842569..1842722,1843192..1843370,1844298..1844394,1845990..1846016,1846754..1846957,1851186..1851363,1854793..1854867,1855460..1855587,1855802..1855933,1856058..1856206,1860641..1860766,1863362..1863676)
location: region:1841894-1863676:1
so has part: feature:1841894-1841903:1:exon
so has part: feature:1842270-1842388:1:exon
so has part: feature:1842569-1842722:1:exon
so has part: feature:1843192-1843370:1:exon
so has part: feature:1844298-1844394:1:exon
so has part: feature:1845990-1846016:1:exon
so has part: feature:1846754-1846957:1:exon
so has part: feature:1851186-1851363:1:exon
so has part: feature:1854793-1854867:1:exon
so has part: feature:1855460-1855587:1:exon
so has part: feature:1855802-1855933:1:exon
so has part: feature:1856058-1856206:1:exon
so has part: feature:1860641-1860766:1:exon
so has part: feature:1863362-1863676:1:exon

XP_054498180.1
type: Protein
SIO_000068: ncbiprotein

position:1841894:1
position: 1841894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863676:1
position: 1863676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1841894-1841903:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1842270-1842388:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1842569-1842722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1843192-1843370:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1844298-1844394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1845990-1846016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1846754-1846957:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1851186-1851363:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1854793-1854867:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1855460-1855587:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1855802-1855933:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1856058-1856206:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1860641-1860766:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1863362-1863676:1:exon

ZNF592
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: ZNF592
note: zinc finger protein 592; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1880786..1918930
location: region:1880786-1918930:1
so has part: feature:1880786-1918930:1:exon
subclass of: SO_0000010

129126140
type: Gene
SIO_000068: ncbigene

position:1880786:1
position: 1880786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1918930:1
position: 1918930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1880786-1918930:1:exon

ZNF592
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: ZNF592
product: zinc finger protein 592, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641928.1
SIO_010081: ZNF592
subclass of: SO_0000673
so part of: ZNF592
location: join(1880786..1880865,1884565..1886867,1900989..1901167,1906752..1906928,1907711..1907870,1910481..1910759,1911799..1911911,1915877..1916045,1917235..1918930)
location: region:1880786-1918930:1
so has part: feature:1880786-1880865:1:exon
so has part: feature:1884565-1886867:1:exon
so has part: feature:1900989-1901167:1:exon
so has part: feature:1906752-1906928:1:exon
so has part: feature:1907711-1907870:1:exon
so has part: feature:1910481-1910759:1:exon
so has part: feature:1911799-1911911:1:exon
so has part: feature:1915877-1916045:1:exon
so has part: feature:1917235-1918930:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1880786-1880865:1:exon

position:1880865:1
position: 1880865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1884565-1886867:1:exon

position:1884565:1
position: 1884565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1886867:1
position: 1886867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1900989-1901167:1:exon

position:1900989:1
position: 1900989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1901167:1
position: 1901167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1906752-1906928:1:exon

position:1906752:1
position: 1906752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1906928:1
position: 1906928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1907711-1907870:1:exon

position:1907711:1
position: 1907711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1907870:1
position: 1907870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1910481-1910759:1:exon

position:1910481:1
position: 1910481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1910759:1
position: 1910759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1911799-1911911:1:exon

position:1911799:1
position: 1911799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1911911:1
position: 1911911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1915877-1916045:1:exon

position:1915877:1
position: 1915877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1916045:1
position: 1916045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1917235-1918930:1:exon

position:1917235:1
position: 1917235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF592
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: ZNF592
product: zinc finger protein 592, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641930.1
SIO_010081: ZNF592
subclass of: SO_0000673
so part of: ZNF592
location: join(1880786..1880865,1884565..1886867,1900989..1901167,1906752..1906928,1907711..1907870,1910481..1910759,1911799..1911911,1915877..1916012,1917235..1918930)
location: region:1880786-1918930:1
so has part: feature:1880786-1880865:1:exon
so has part: feature:1884565-1886867:1:exon
so has part: feature:1900989-1901167:1:exon
so has part: feature:1906752-1906928:1:exon
so has part: feature:1907711-1907870:1:exon
so has part: feature:1910481-1910759:1:exon
so has part: feature:1911799-1911911:1:exon
so has part: feature:1915877-1916012:1:exon
so has part: feature:1917235-1918930:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1880786-1880865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1884565-1886867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1900989-1901167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1906752-1906928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1907711-1907870:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1910481-1910759:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1911799-1911911:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1915877-1916012:1:exon

position:1916012:1
position: 1916012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1917235-1918930:1:exon

ZNF592
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ZNF592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 592 isoform X1
translation: MGDMKTPDFDDLLAAFDIPDPTSLDAKETIPSAGEENENHLKSSGMCIDENVSLSHSLPPSDAPVVSVIVKNTSRQESFEAEKEGNHLATGLLHNGFRGSDLPPEAHALVHNYGKFESTFINGDSSRGYSDKLDESKSEPLPTFSQFSPISSPEPEDTFKENSIGDKPKHAQTPYFPPPSIYVPTGASVLDHLRKVPEPELSMFDQYCKKEQKTEIHCQPENRLEMSRREQDRAVERFAESGKDLLDTNSFLGEGLVFGDLPHNNLGDGKGSVPELNVSSSIPPRQRLKPTHSKLSSCVAALVALQAKKVVCIPKSDQPNFTKEPGPFKDGTKGSPKMPKSPKSPRSPLEVVRKAGKQPESPRSVCSDSSGKGSPSMAAGSPPAIPKVRIKTIKTSSGEIKRTVTRILPENDELGKSSEESPAETSSAEEFIKSFPSPDTSAVTEGEAGRNSTKNGAAVAIQLSNVVSPYSDSVKMDIANSTCTVSLSPLPNCGGGAIKVGVKRQQPSNTGTSSLLPKAVHLANLNLVPHSVAASVTAKTSAQRRNQPQVTQMSVPLVHQVKKAAPVVMEAFHKVLHSANPVPIYTPNLSPPPDTSINLPASGYCCLECGDSFALEKSLTQHYSRRSVHIEVMCTQCSTMLLFFNKCSLLKHARDHKSKGFIMQCSQLLMKPISIDQMFSPSPTSSSASPASQTFLSSSPPPKSSAASGGGVGISASTQPALPLYTDPQRLIRHGSKCLECNKQEQDYTSLAAHYQRTSEDNERLTCQVCQMMLPNQCSYCAHQRIHAHKSPYCCPECGAVCRSAYFQTHVKENCLHYSRKVGFRCIHCGVVFMTMAMLKVHIHEKHCEVFHKCSFCPKAFKSADTTMAHVASQHPAEPHKTTQVIYKCSCEMVFNKKKLLQEHFQQNPSKLLVGVFKCPQCQLVYMQKQQLMQHVKGVHGVPRNPEELSNFRQKSEKASRNQVHTSPKELLVANGTSPSSLTRKDMRVEGHNPESKSRLRRTGWTCKECSQWIPDRETYVSHMKRNHGRSMKRYPCRQCERSFNASNSLRRHIRNNHDTAKKVYTCWYCTDENQTFPQPFMLENHISLMHGIKNPDLSQMAKVKAPERDRAEVTDPYFHGKLNAKSPKRMAQDELGEAESAAGSDAPPAKKLKAPWKCAKCGFATDVRTEFQEHIPRHKSDSSTFQCLFCGLCYTSHISLNRHLFIVHKVKDEEEEDEEEEEEEGDERQKLQIEMGKNGHEDYNGELNTTVEEENKYKECKRDSALCEHSQTCGAEGPNSTSQNNHSKSLKT
SIO_010081: ZNF592
subclass of: SO_0000673
so part of: ZNF592
location: join(1884573..1886867,1900989..1901167,1906752..1906928,1907711..1907870,1910481..1910759,1911799..1911911,1915877..1916045,1917235..1917744)
location: region:1884573-1917744:1
so has part: feature:1884573-1886867:1:exon
so has part: feature:1900989-1901167:1:exon
so has part: feature:1906752-1906928:1:exon
so has part: feature:1907711-1907870:1:exon
so has part: feature:1910481-1910759:1:exon
so has part: feature:1911799-1911911:1:exon
so has part: feature:1915877-1916045:1:exon
so has part: feature:1917235-1917744:1:exon

XP_054497903.1
type: Protein
SIO_000068: ncbiprotein

position:1884573:1
position: 1884573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1917744:1
position: 1917744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1884573-1886867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1900989-1901167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1906752-1906928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1907711-1907870:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1910481-1910759:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1911799-1911911:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1915877-1916045:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1917235-1917744:1:exon

ZNF592
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ZNF592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 592 isoform X2
translation: MGDMKTPDFDDLLAAFDIPDPTSLDAKETIPSAGEENENHLKSSGMCIDENVSLSHSLPPSDAPVVSVIVKNTSRQESFEAEKEGNHLATGLLHNGFRGSDLPPEAHALVHNYGKFESTFINGDSSRGYSDKLDESKSEPLPTFSQFSPISSPEPEDTFKENSIGDKPKHAQTPYFPPPSIYVPTGASVLDHLRKVPEPELSMFDQYCKKEQKTEIHCQPENRLEMSRREQDRAVERFAESGKDLLDTNSFLGEGLVFGDLPHNNLGDGKGSVPELNVSSSIPPRQRLKPTHSKLSSCVAALVALQAKKVVCIPKSDQPNFTKEPGPFKDGTKGSPKMPKSPKSPRSPLEVVRKAGKQPESPRSVCSDSSGKGSPSMAAGSPPAIPKVRIKTIKTSSGEIKRTVTRILPENDELGKSSEESPAETSSAEEFIKSFPSPDTSAVTEGEAGRNSTKNGAAVAIQLSNVVSPYSDSVKMDIANSTCTVSLSPLPNCGGGAIKVGVKRQQPSNTGTSSLLPKAVHLANLNLVPHSVAASVTAKTSAQRRNQPQVTQMSVPLVHQVKKAAPVVMEAFHKVLHSANPVPIYTPNLSPPPDTSINLPASGYCCLECGDSFALEKSLTQHYSRRSVHIEVMCTQCSTMLLFFNKCSLLKHARDHKSKGFIMQCSQLLMKPISIDQMFSPSPTSSSASPASQTFLSSSPPPKSSAASGGGVGISASTQPALPLYTDPQRLIRHGSKCLECNKQEQDYTSLAAHYQRTSEDNERLTCQVCQMMLPNQCSYCAHQRIHAHKSPYCCPECGAVCRSAYFQTHVKENCLHYSRKVGFRCIHCGVVFMTMAMLKVHIHEKHCEVFHKCSFCPKAFKSADTTMAHVASQHPAEPHKTTQVIYKCSCEMVFNKKKLLQEHFQQNPSKLLVGVFKCPQCQLVYMQKQQLMQHVKGVHGVPRNPEELSNFRQKSEKASRNQVHTSPKELLVANGTSPSSLTRKDMRVEGHNPESKSRLRRTGWTCKECSQWIPDRETYVSHMKRNHGRSMKRYPCRQCERSFNASNSLRRHIRNNHDTAKKVYTCWYCTDENQTFPQPFMLENHISLMHGIKNPDLSQMAKVKAPERDRAEAKSPKRMAQDELGEAESAAGSDAPPAKKLKAPWKCAKCGFATDVRTEFQEHIPRHKSDSSTFQCLFCGLCYTSHISLNRHLFIVHKVKDEEEEDEEEEEEEGDERQKLQIEMGKNGHEDYNGELNTTVEEENKYKECKRDSALCEHSQTCGAEGPNSTSQNNHSKSLKT
SIO_010081: ZNF592
subclass of: SO_0000673
so part of: ZNF592
location: join(1884573..1886867,1900989..1901167,1906752..1906928,1907711..1907870,1910481..1910759,1911799..1911911,1915877..1916012,1917235..1917744)
location: region:1884573-1917744:1
so has part: feature:1884573-1886867:1:exon
so has part: feature:1900989-1901167:1:exon
so has part: feature:1906752-1906928:1:exon
so has part: feature:1907711-1907870:1:exon
so has part: feature:1910481-1910759:1:exon
so has part: feature:1911799-1911911:1:exon
so has part: feature:1915877-1916012:1:exon
so has part: feature:1917235-1917744:1:exon

XP_054497905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1884573-1886867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1900989-1901167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1906752-1906928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1907711-1907870:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1910481-1910759:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1911799-1911911:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1915877-1916012:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1917235-1917744:1:exon

SEC11A
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: SEC11A
note: SEC11 homolog A, signal peptidase complex subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1919769..1926719
location: region:1919769-1926719:1
so has part: feature:1919769-1926719:1:exon
subclass of: SO_0000010

129126396
type: Gene
SIO_000068: ncbigene

position:1919769:1
position: 1919769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1926719:1
position: 1926719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1919769-1926719:1:exon

SEC11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: SEC11A
product: SEC11 homolog A, signal peptidase complex subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_054642304.1
SIO_010081: SEC11A
subclass of: SO_0000673
so part of: SEC11A
location: join(1919769..1920299,1920402..1920511,1922062..1922211,1925677..1925796,1926228..1926387)
location: region:1919769-1926387:1
so has part: feature:1919769-1920299:1:exon
so has part: feature:1920402-1920511:1:exon
so has part: feature:1922062-1922211:1:exon
so has part: feature:1925677-1925796:1:exon
so has part: feature:1926228-1926387:1:exon

position:1926387:1
position: 1926387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1919769-1920299:1:exon

position:1920299:1
position: 1920299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1920402-1920511:1:exon

position:1920402:1
position: 1920402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1920511:1
position: 1920511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1922062-1922211:1:exon

position:1922062:1
position: 1922062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1922211:1
position: 1922211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1925677-1925796:1:exon

position:1925677:1
position: 1925677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1925796:1
position: 1925796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1926228-1926387:1:exon

position:1926228:1
position: 1926228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEC11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: SEC11A
product: SEC11 homolog A, signal peptidase complex subunit, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642305.1
SIO_010081: SEC11A
subclass of: SO_0000673
so part of: SEC11A
location: join(1919782..1920299,1920402..1920511,1922062..1922211,1925677..1925796,1926228..1926285,1926430..1926719)
location: region:1919782-1926719:1
so has part: feature:1919782-1920299:1:exon
so has part: feature:1920402-1920511:1:exon
so has part: feature:1922062-1922211:1:exon
so has part: feature:1925677-1925796:1:exon
so has part: feature:1926228-1926285:1:exon
so has part: feature:1926430-1926719:1:exon

position:1919782:1
position: 1919782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1919782-1920299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1920402-1920511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1922062-1922211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1925677-1925796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1926228-1926285:1:exon

position:1926285:1
position: 1926285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1926430-1926719:1:exon

position:1926430:1
position: 1926430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEC11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: SEC11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptidase complex catalytic subunit SEC11A isoform X2
translation: MGAGWKCVLLAVGVALAAGAGCAGRSRLWLRPGPAPFPFPPRCRCPRGGSGGDVAGRRKRKRGRAGAAAAVAAAMLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHRGDLLFLTNRIEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGDIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE
SIO_010081: SEC11A
subclass of: SO_0000673
so part of: SEC11A
location: join(1920027..1920299,1920402..1920511,1922062..1922211,1925677..1925796,1926228..1926285,1926430..1926480)
location: region:1920027-1926480:1
so has part: feature:1920027-1920299:1:exon
so has part: feature:1920402-1920511:1:exon
so has part: feature:1922062-1922211:1:exon
so has part: feature:1925677-1925796:1:exon
so has part: feature:1926228-1926285:1:exon
so has part: feature:1926430-1926480:1:exon

XP_054498280.1
type: Protein
SIO_000068: ncbiprotein

position:1920027:1
position: 1920027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1926480:1
position: 1926480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1920027-1920299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1920402-1920511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1922062-1922211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1925677-1925796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1926228-1926285:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1926430-1926480:1:exon

SEC11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: SEC11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptidase complex catalytic subunit SEC11A isoform X1
translation: MGAGWKCVLLAVGVALAAGAGCAGRSRLWLRPGPAPFPFPPRCRCPRGGSGGDVAGRRKRKRGRAGAAAAVAAAMLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHRGDLLFLTNRIEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGDIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKVRALLFPACFSHPSYNSFMRTQTEPCALHVLLL
SIO_010081: SEC11A
subclass of: SO_0000673
so part of: SEC11A
location: join(1920027..1920299,1920402..1920511,1922062..1922211,1925677..1925796,1926228..1926387)
location: region:1920027-1926387:1
so has part: feature:1920027-1920299:1:exon
so has part: feature:1920402-1920511:1:exon
so has part: feature:1922062-1922211:1:exon
so has part: feature:1925677-1925796:1:exon
so has part: feature:1926228-1926387:1:exon

XP_054498279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1920027-1920299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1920402-1920511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1922062-1922211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1925677-1925796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1926228-1926387:1:exon

NMB
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: NMB
note: neuromedin B; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1938756..1943115
location: region:1938756-1943115:1
so has part: feature:1938756-1943115:1:exon
subclass of: SO_0000010

129126417
type: Gene
SIO_000068: ncbigene

position:1938756:1
position: 1938756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1943115:1
position: 1943115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1938756-1943115:1:exon

NMB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: NMB
product: neuromedin B
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642332.1
SIO_010081: NMB
subclass of: SO_0000673
so part of: NMB
location: join(1938756..1938912,1939372..1939574,1942859..1943115)
location: region:1938756-1943115:1
so has part: feature:1938756-1938912:1:exon
so has part: feature:1939372-1939574:1:exon
so has part: feature:1942859-1943115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1938756-1938912:1:exon

position:1938912:1
position: 1938912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1939372-1939574:1:exon

position:1939372:1
position: 1939372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1939574:1
position: 1939574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1942859-1943115:1:exon

position:1942859:1
position: 1942859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NMB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: NMB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuromedin-B
translation: MALRCLLLLLCGAALGPAVHLDFAEHRSQAAKIKVNPRGNLWATGHFMGKKSVTGSPHLEAAEEPAVPVVFGPSLRALLEDMMELLTRELLKILLQERLLDENQGKYDLTGQETGLLTKVLEKYFSN
SIO_010081: NMB
subclass of: SO_0000673
so part of: NMB
location: join(1938780..1938912,1939372..1939574,1942859..1942906)
location: region:1938780-1942906:1
so has part: feature:1938780-1938912:1:exon
so has part: feature:1939372-1939574:1:exon
so has part: feature:1942859-1942906:1:exon

XP_054498307.1
type: Protein
SIO_000068: ncbiprotein

position:1938780:1
position: 1938780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1942906:1
position: 1942906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1938780-1938912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1939372-1939574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1942859-1942906:1:exon

DUOXA1
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: DUOXA1
note: dual oxidase maturation factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1957158..1963516
location: region:1957158-1963516:1
so has part: feature:1957158-1963516:1:exon
subclass of: SO_0000010

129126315
type: Gene
SIO_000068: ncbigene

position:1957158:1
position: 1957158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1963516:1
position: 1963516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1957158-1963516:1:exon

DUOXA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: DUOXA1
product: dual oxidase maturation factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
transcript id: XM_054642187.1
SIO_010081: DUOXA1
subclass of: SO_0000673
so part of: DUOXA1
location: join(1957158..1957304,1958155..1958212,1958791..1958925,1959096..1959309,1962499..1962713,1963308..1963516)
location: region:1957158-1963516:1
so has part: feature:1957158-1957304:1:exon
so has part: feature:1958155-1958212:1:exon
so has part: feature:1958791-1958925:1:exon
so has part: feature:1959096-1959309:1:exon
so has part: feature:1962499-1962713:1:exon
so has part: feature:1963308-1963516:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1957158-1957304:1:exon

position:1957304:1
position: 1957304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1958155-1958212:1:exon

position:1958155:1
position: 1958155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1958212:1
position: 1958212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1958791-1958925:1:exon

position:1958791:1
position: 1958791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1958925:1
position: 1958925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1959096-1959309:1:exon

position:1959096:1
position: 1959096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1959309:1
position: 1959309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1962499-1962713:1:exon

position:1962499:1
position: 1962499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1962713:1
position: 1962713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1963308-1963516:1:exon

position:1963308:1
position: 1963308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DUOXA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: DUOXA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual oxidase maturation factor 1
translation: MTLWNGSYPFYPGANACFPFDTTRAVIVTVFLSMLATSIIILPGIPARRRLLWFLRLVLGLFMGAVILNVQFTRDWQSGWVQANTSYKSFSPVQVSADIGLHIGLAGVNVTLRGNPVEQINETINYNEHFPWSFGADYDHSYSQGLQKGLPSPILYVAEKFSSQSPCGVHRQYRIAGHYVSLTLWLAFCTWLISILLFSMSILLYGGQMLLLTGTLILSSLLLFSTARNSLRCPIQFGPVSLRTDYGESFWLALATGLLCLLLGLAIIILNSVQPQKLKLIFSLDKSNEEEQWDQSWLPAQPSCSAQGGFMVPLGELCPGTATQL
SIO_010081: DUOXA1
subclass of: SO_0000673
so part of: DUOXA1
location: join(1957158..1957304,1958155..1958212,1958791..1958925,1959096..1959309,1962499..1962713,1963308..1963516)
location: region:1957158-1963516:1
so has part: feature:1957158-1957304:1:exon
so has part: feature:1958155-1958212:1:exon
so has part: feature:1958791-1958925:1:exon
so has part: feature:1959096-1959309:1:exon
so has part: feature:1962499-1962713:1:exon
so has part: feature:1963308-1963516:1:exon

XP_054498162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1957158-1957304:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1958155-1958212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1958791-1958925:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1959096-1959309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1962499-1962713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1963308-1963516:1:exon

DUOXA2
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: DUOXA2
note: dual oxidase maturation factor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1965736..1971248)
location: region:1965736-1971248:-1
so has part: feature:1965736-1971248:-1:exon
subclass of: SO_0000010

129126316
type: Gene
SIO_000068: ncbigene

position:1965736:-1
position: 1965736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1971248:-1
position: 1971248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1965736-1971248:-1:exon

DUOXA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: DUOXA2
product: dual oxidase maturation factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
transcript id: XM_054642188.1
SIO_010081: DUOXA2
subclass of: SO_0000673
so part of: DUOXA2
location: complement(join(1965736..1965929,1966284..1966498,1968002..1968215,1968386..1968520,1970659..1970716,1971102..1971248))
location: region:1965736-1971248:-1
so has part: feature:1971102-1971248:-1:exon
so has part: feature:1970659-1970716:-1:exon
so has part: feature:1968386-1968520:-1:exon
so has part: feature:1968002-1968215:-1:exon
so has part: feature:1966284-1966498:-1:exon
so has part: feature:1965736-1965929:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1971102-1971248:-1:exon

position:1971102:-1
position: 1971102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1970659-1970716:-1:exon

position:1970659:-1
position: 1970659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1970716:-1
position: 1970716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1968386-1968520:-1:exon

position:1968386:-1
position: 1968386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1968520:-1
position: 1968520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1968002-1968215:-1:exon

position:1968002:-1
position: 1968002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1968215:-1
position: 1968215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1966284-1966498:-1:exon

position:1966284:-1
position: 1966284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1966498:-1
position: 1966498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1965736-1965929:-1:exon

position:1965929:-1
position: 1965929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DUOXA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: DUOXA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual oxidase maturation factor 2
translation: MTLFDGVYPFYPQQRKAAVFDISTIIVTVVFLTLACSFLLITPGIRGRARLYWTLRVLLSLFVGVVIVVVQFTGDWQSGWVQANTSYKSFSPVQVSADIGLHIGLAGVNVTLRGNPVEQINETINYNEHFPWSFGADYDHSYSQGLQKGLPSPILYVAEKFSSQSPCGVHRQYRIAGHYASAMLWVAFCTWVISNILLSMPALVYGGYMLLATGAFMIFSLLSFSTVRNSPMCLIQIGTSTLHVAYGGSFWLMLAIGLLCFVAGITIVAMHHLNLDLLKTFFDLREDKAEEDQEMPEVFINPHFVSKSLCPSEPTEINSV
SIO_010081: DUOXA2
subclass of: SO_0000673
so part of: DUOXA2
location: complement(join(1965736..1965929,1966284..1966498,1968002..1968215,1968386..1968520,1970659..1970716,1971102..1971248))
location: region:1965736-1971248:-1
so has part: feature:1971102-1971248:-1:exon
so has part: feature:1970659-1970716:-1:exon
so has part: feature:1968386-1968520:-1:exon
so has part: feature:1968002-1968215:-1:exon
so has part: feature:1966284-1966498:-1:exon
so has part: feature:1965736-1965929:-1:exon

XP_054498163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1971102-1971248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1970659-1970716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1968386-1968520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1968002-1968215:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1966284-1966498:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1965736-1965929:-1:exon

DUOX2
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: DUOX2
note: dual oxidase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1977652..1997219
location: region:1977652-1997219:1
so has part: feature:1977652-1997219:1:exon
subclass of: SO_0000010

129126256
type: Gene
SIO_000068: ncbigene

position:1977652:1
position: 1977652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1997219:1
position: 1997219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1977652-1997219:1:exon

DUOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: DUOX2
product: dual oxidase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
transcript id: XM_054642094.1
SIO_010081: DUOX2
subclass of: SO_0000673
so part of: DUOX2
location: join(1977652..1977715,1978417..1978500,1980283..1980447,1981694..1981881,1982978..1983179,1983932..1984098,1984182..1984242,1984362..1984458,1985387..1985474,1985808..1985910,1986049..1986212,1986631..1986797,1986951..1987069,1987813..1987950,1988540..1988653,1989263..1989465,1989653..1989838,1990259..1990484,1991084..1991177,1991369..1991544,1991759..1991828,1992284..1992379,1993090..1993268,1994069..1994299,1994523..1994622,1994741..1994790,1994941..1995068,1995255..1995408,1995545..1995777,1995926..1996084,1996275..1996430,1996540..1996668,1997097..1997219)
location: region:1977652-1997219:1
so has part: feature:1977652-1977715:1:exon
so has part: feature:1978417-1978500:1:exon
so has part: feature:1980283-1980447:1:exon
so has part: feature:1981694-1981881:1:exon
so has part: feature:1982978-1983179:1:exon
so has part: feature:1983932-1984098:1:exon
so has part: feature:1984182-1984242:1:exon
so has part: feature:1984362-1984458:1:exon
so has part: feature:1985387-1985474:1:exon
so has part: feature:1985808-1985910:1:exon
so has part: feature:1986049-1986212:1:exon
so has part: feature:1986631-1986797:1:exon
so has part: feature:1986951-1987069:1:exon
so has part: feature:1987813-1987950:1:exon
so has part: feature:1988540-1988653:1:exon
so has part: feature:1989263-1989465:1:exon
so has part: feature:1989653-1989838:1:exon
so has part: feature:1990259-1990484:1:exon
so has part: feature:1991084-1991177:1:exon
so has part: feature:1991369-1991544:1:exon
so has part: feature:1991759-1991828:1:exon
so has part: feature:1992284-1992379:1:exon
so has part: feature:1993090-1993268:1:exon
so has part: feature:1994069-1994299:1:exon
so has part: feature:1994523-1994622:1:exon
so has part: feature:1994741-1994790:1:exon
so has part: feature:1994941-1995068:1:exon
so has part: feature:1995255-1995408:1:exon
so has part: feature:1995545-1995777:1:exon
so has part: feature:1995926-1996084:1:exon
so has part: feature:1996275-1996430:1:exon
so has part: feature:1996540-1996668:1:exon
so has part: feature:1997097-1997219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1977652-1977715:1:exon

position:1977715:1
position: 1977715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1978417-1978500:1:exon

position:1978417:1
position: 1978417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1978500:1
position: 1978500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1980283-1980447:1:exon

position:1980283:1
position: 1980283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1980447:1
position: 1980447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1981694-1981881:1:exon

position:1981694:1
position: 1981694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1981881:1
position: 1981881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1982978-1983179:1:exon

position:1982978:1
position: 1982978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1983179:1
position: 1983179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1983932-1984098:1:exon

position:1983932:1
position: 1983932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1984098:1
position: 1984098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1984182-1984242:1:exon

position:1984182:1
position: 1984182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1984242:1
position: 1984242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1984362-1984458:1:exon

position:1984362:1
position: 1984362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1984458:1
position: 1984458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1985387-1985474:1:exon

position:1985387:1
position: 1985387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1985474:1
position: 1985474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1985808-1985910:1:exon

position:1985808:1
position: 1985808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1985910:1
position: 1985910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1986049-1986212:1:exon

position:1986049:1
position: 1986049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1986212:1
position: 1986212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1986631-1986797:1:exon

position:1986631:1
position: 1986631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1986797:1
position: 1986797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1986951-1987069:1:exon

position:1986951:1
position: 1986951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1987069:1
position: 1987069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1987813-1987950:1:exon

position:1987813:1
position: 1987813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1987950:1
position: 1987950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1988540-1988653:1:exon

position:1988540:1
position: 1988540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1988653:1
position: 1988653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1989263-1989465:1:exon

position:1989263:1
position: 1989263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1989465:1
position: 1989465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1989653-1989838:1:exon

position:1989653:1
position: 1989653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1989838:1
position: 1989838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1990259-1990484:1:exon

position:1990259:1
position: 1990259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1990484:1
position: 1990484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1991084-1991177:1:exon

position:1991084:1
position: 1991084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1991177:1
position: 1991177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1991369-1991544:1:exon

position:1991369:1
position: 1991369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1991544:1
position: 1991544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1991759-1991828:1:exon

position:1991759:1
position: 1991759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1991828:1
position: 1991828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1992284-1992379:1:exon

position:1992284:1
position: 1992284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1992379:1
position: 1992379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1993090-1993268:1:exon

position:1993090:1
position: 1993090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1993268:1
position: 1993268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1994069-1994299:1:exon

position:1994069:1
position: 1994069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1994299:1
position: 1994299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1994523-1994622:1:exon

position:1994523:1
position: 1994523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1994622:1
position: 1994622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1994741-1994790:1:exon

position:1994741:1
position: 1994741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1994790:1
position: 1994790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1994941-1995068:1:exon

position:1994941:1
position: 1994941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1995068:1
position: 1995068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1995255-1995408:1:exon

position:1995255:1
position: 1995255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1995408:1
position: 1995408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1995545-1995777:1:exon

position:1995545:1
position: 1995545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1995777:1
position: 1995777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1995926-1996084:1:exon

position:1995926:1
position: 1995926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1996084:1
position: 1996084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1996275-1996430:1:exon

position:1996275:1
position: 1996275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1996430:1
position: 1996430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1996540-1996668:1:exon

position:1996540:1
position: 1996540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1996668:1
position: 1996668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1997097-1997219:1:exon

position:1997097:1
position: 1997097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DUOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: DUOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual oxidase 2 isoform X1
translation: MEPAAAMLSLVVALVGTWTLGGAQESISWEVQRYDGWYNNLQHHSHGSVGARLLRLLPARFADGVYQALQEPRVPNARQLSTALARGPSGLPSRRNTTVLAVFFGFHVLLDILETEKPGCPAEFLNIHIPSGDAVFDPAGTGDVVLPFQRARWAAETGQSPNSPREQTNGVTGWLDGSSIYGPSHSWSDALRSFQGGQLAAGPSGSLPRQTDGRVPMWKALDPSTGQGGPQGIYDLGSAWGNENPFLQAESIAWFRYHNHVAAALAQQHPAWSDEDLFQHARKRVIATFQSIVLYEWLPTLLGTRVPEYPGYQQHLDPSISPEFVAAARQFLATMVPPGVYKRDTRCRFQNVSVSGASFPAVRLCNSYWSRESPGLQQAEDVDELLLGMSSQIAEREDNVVVEDLQDYWYGPLRYSRSDYVANWIQRGRDFGLPTYNQVRQRFGLEPLQNWSNLAPHLEPQVLQKVAALYGNNLAGLELLPGGMLEAGGSLFSTIILEQFLRLRDGDRFWFENTKNGLFTEEEIREIRNTTFHSVLTSVTSAKPTELQPHVFIWRQGDPCPQPQQLTAQLLANCTPMMVLDYFAGSGAGFGIIIVVLCCLPLVTLFVAWVVAALRKRDFQKLQRKQGTSVRREVSGEAVHAMEWHGPKTDNCPVYIQLQAEKVLKVLDSRGSVLRSINLKAQPRVEVILSNNKGNKALLLKSPKEYDLVLLFNGEAERSIFVGKLRDYLKESRFDLHLSEMKEQSLMKRAVTQEQRKQILETFFRHLFAQVLEIDRSDAGELSFESSQKARESLTCELSRAEFAEALGLKEHSMFVESMFSLADKDGNGYISFREFLDILVVFMKGSPEEKSKVMFRMYDIDENGFLSKEEFLRMLRSFIEISNNCLSREQAEQVTESMFRASGFQDRDELTWENFHYMLRDHDSELRLTQLCVKGIPEVSKQNLHNCVSFIKKNEPRGTISEEKKDPNLDTVSHYMERKGQELRKRPGRKANQYQLRLYTEARRKKYERNRVQQKIQEFKRFVENYRRHIVCVILFSAITAGVFAERAYYYAFASPSTGIAQTTFVGIIISRGSAASISFMYSYILLTMCRNLITVLRETFLNHYIPFDAAVDFHRWIAMAALIFSVLHTAGHVVNVYIFSVTPLSVLSCLFSTVFTNDGSQLPQKYYWWFFQTIPGMTGVLLLVVLAVMYVFATRHFRRVSFQGFWITHHLYVLLYILVIIHGSYALIQQPRFYIYFIIPALIYSADKLYSLSRKKVEISVVKAELLPSGVTHLQFQRPQDFDYKSGQWVRIACVGLGTTEYHPFTLTSAPHDDTLSLHIRAVGPWTTRLRELYSPKSLALLGTLPKLYLDGPFGEGHQEWNKFEVSVLVGGGIGVTPFASILKDLVFKSSINSKLLCKKIYFIWVTRTQRQFEWLTDIIREVEESDKNGLVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNKSLFTGLRSITHFGRPPFVPFFSSLQEVHPEVQKIGVFSCGPPGMTKSVEQACRHMNKKDQTYFAHHYENF
SIO_010081: DUOX2
subclass of: SO_0000673
so part of: DUOX2
location: join(1977652..1977715,1978417..1978500,1980283..1980447,1981694..1981881,1982978..1983179,1983932..1984098,1984182..1984242,1984362..1984458,1985387..1985474,1985808..1985910,1986049..1986212,1986631..1986797,1986951..1987069,1987813..1987950,1988540..1988653,1989263..1989465,1989653..1989838,1990259..1990484,1991084..1991177,1991369..1991544,1991759..1991828,1992284..1992379,1993090..1993268,1994069..1994299,1994523..1994622,1994741..1994790,1994941..1995068,1995255..1995408,1995545..1995777,1995926..1996084,1996275..1996430,1996540..1996668,1997097..1997219)
location: region:1977652-1997219:1
so has part: feature:1977652-1977715:1:exon
so has part: feature:1978417-1978500:1:exon
so has part: feature:1980283-1980447:1:exon
so has part: feature:1981694-1981881:1:exon
so has part: feature:1982978-1983179:1:exon
so has part: feature:1983932-1984098:1:exon
so has part: feature:1984182-1984242:1:exon
so has part: feature:1984362-1984458:1:exon
so has part: feature:1985387-1985474:1:exon
so has part: feature:1985808-1985910:1:exon
so has part: feature:1986049-1986212:1:exon
so has part: feature:1986631-1986797:1:exon
so has part: feature:1986951-1987069:1:exon
so has part: feature:1987813-1987950:1:exon
so has part: feature:1988540-1988653:1:exon
so has part: feature:1989263-1989465:1:exon
so has part: feature:1989653-1989838:1:exon
so has part: feature:1990259-1990484:1:exon
so has part: feature:1991084-1991177:1:exon
so has part: feature:1991369-1991544:1:exon
so has part: feature:1991759-1991828:1:exon
so has part: feature:1992284-1992379:1:exon
so has part: feature:1993090-1993268:1:exon
so has part: feature:1994069-1994299:1:exon
so has part: feature:1994523-1994622:1:exon
so has part: feature:1994741-1994790:1:exon
so has part: feature:1994941-1995068:1:exon
so has part: feature:1995255-1995408:1:exon
so has part: feature:1995545-1995777:1:exon
so has part: feature:1995926-1996084:1:exon
so has part: feature:1996275-1996430:1:exon
so has part: feature:1996540-1996668:1:exon
so has part: feature:1997097-1997219:1:exon

XP_054498069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1977652-1977715:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1978417-1978500:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1980283-1980447:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1981694-1981881:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1982978-1983179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1983932-1984098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1984182-1984242:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1984362-1984458:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1985387-1985474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1985808-1985910:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1986049-1986212:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1986631-1986797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1986951-1987069:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1987813-1987950:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1988540-1988653:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1989263-1989465:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1989653-1989838:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1990259-1990484:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1991084-1991177:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1991369-1991544:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1991759-1991828:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1992284-1992379:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1993090-1993268:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1994069-1994299:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1994523-1994622:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1994741-1994790:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1994941-1995068:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1995255-1995408:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1995545-1995777:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1995926-1996084:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1996275-1996430:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1996540-1996668:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1997097-1997219:1:exon

DUOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: DUOX2
product: dual oxidase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
transcript id: XM_054642095.1
SIO_010081: DUOX2
subclass of: SO_0000673
so part of: DUOX2
location: join(1977670..1977715,1978417..1978500,1980283..1980447,1981694..1981881,1982978..1983179,1983932..1984098,1984182..1984242,1984362..1984458,1985387..1985474,1985808..1985910,1986049..1986212,1986631..1986797,1986951..1987069,1987813..1987950,1988540..1988653,1989263..1989465,1989653..1989838,1990259..1990484,1991084..1991177,1991369..1991544,1991759..1991819,1992284..1992379,1993090..1993268,1994069..1994299,1994523..1994622,1994741..1994790,1994941..1995068,1995255..1995408,1995545..1995777,1995926..1996084,1996275..1996430,1996540..1996668,1997097..1997219)
location: region:1977670-1997219:1
so has part: feature:1977670-1977715:1:exon
so has part: feature:1978417-1978500:1:exon
so has part: feature:1980283-1980447:1:exon
so has part: feature:1981694-1981881:1:exon
so has part: feature:1982978-1983179:1:exon
so has part: feature:1983932-1984098:1:exon
so has part: feature:1984182-1984242:1:exon
so has part: feature:1984362-1984458:1:exon
so has part: feature:1985387-1985474:1:exon
so has part: feature:1985808-1985910:1:exon
so has part: feature:1986049-1986212:1:exon
so has part: feature:1986631-1986797:1:exon
so has part: feature:1986951-1987069:1:exon
so has part: feature:1987813-1987950:1:exon
so has part: feature:1988540-1988653:1:exon
so has part: feature:1989263-1989465:1:exon
so has part: feature:1989653-1989838:1:exon
so has part: feature:1990259-1990484:1:exon
so has part: feature:1991084-1991177:1:exon
so has part: feature:1991369-1991544:1:exon
so has part: feature:1991759-1991819:1:exon
so has part: feature:1992284-1992379:1:exon
so has part: feature:1993090-1993268:1:exon
so has part: feature:1994069-1994299:1:exon
so has part: feature:1994523-1994622:1:exon
so has part: feature:1994741-1994790:1:exon
so has part: feature:1994941-1995068:1:exon
so has part: feature:1995255-1995408:1:exon
so has part: feature:1995545-1995777:1:exon
so has part: feature:1995926-1996084:1:exon
so has part: feature:1996275-1996430:1:exon
so has part: feature:1996540-1996668:1:exon
so has part: feature:1997097-1997219:1:exon

position:1977670:1
position: 1977670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1977670-1977715:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1978417-1978500:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1980283-1980447:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1981694-1981881:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1982978-1983179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1983932-1984098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1984182-1984242:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1984362-1984458:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1985387-1985474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1985808-1985910:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1986049-1986212:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1986631-1986797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1986951-1987069:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1987813-1987950:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1988540-1988653:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1989263-1989465:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1989653-1989838:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1990259-1990484:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1991084-1991177:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1991369-1991544:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1991759-1991819:1:exon

position:1991819:1
position: 1991819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1992284-1992379:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1993090-1993268:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1994069-1994299:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1994523-1994622:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1994741-1994790:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1994941-1995068:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1995255-1995408:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1995545-1995777:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1995926-1996084:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1996275-1996430:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1996540-1996668:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1997097-1997219:1:exon

DUOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: DUOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual oxidase 2 isoform X2
translation: MLSLVVALVGTWTLGGAQESISWEVQRYDGWYNNLQHHSHGSVGARLLRLLPARFADGVYQALQEPRVPNARQLSTALARGPSGLPSRRNTTVLAVFFGFHVLLDILETEKPGCPAEFLNIHIPSGDAVFDPAGTGDVVLPFQRARWAAETGQSPNSPREQTNGVTGWLDGSSIYGPSHSWSDALRSFQGGQLAAGPSGSLPRQTDGRVPMWKALDPSTGQGGPQGIYDLGSAWGNENPFLQAESIAWFRYHNHVAAALAQQHPAWSDEDLFQHARKRVIATFQSIVLYEWLPTLLGTRVPEYPGYQQHLDPSISPEFVAAARQFLATMVPPGVYKRDTRCRFQNVSVSGASFPAVRLCNSYWSRESPGLQQAEDVDELLLGMSSQIAEREDNVVVEDLQDYWYGPLRYSRSDYVANWIQRGRDFGLPTYNQVRQRFGLEPLQNWSNLAPHLEPQVLQKVAALYGNNLAGLELLPGGMLEAGGSLFSTIILEQFLRLRDGDRFWFENTKNGLFTEEEIREIRNTTFHSVLTSVTSAKPTELQPHVFIWRQGDPCPQPQQLTAQLLANCTPMMVLDYFAGSGAGFGIIIVVLCCLPLVTLFVAWVVAALRKRDFQKLQRKQGTSVRREVSGEAVHAMEWHGPKTDNCPVYIQLQAEKVLKVLDSRGSVLRSINLKAQPRVEVILSNNKGNKALLLKSPKEYDLVLLFNGEAERSIFVGKLRDYLKESRFDLHLSEMKEQSLMKRAVTQEQRKQILETFFRHLFAQVLEIDRSDAGELSFESSQKARESLTCELSRAEFAEALGLKEHSMFVESMFSLADKDGNGYISFREFLDILVVFMKGSPEEKSKVMFRMYDIDENGFLSKEEFLRMLRSFIEISNNCLSREQAEQVTESMFRASGFQDRDELTWENFHYMLRDHDSELRLTQLCVKGIPEVSKQNLHNCVSFIKKNETISEEKKDPNLDTVSHYMERKGQELRKRPGRKANQYQLRLYTEARRKKYERNRVQQKIQEFKRFVENYRRHIVCVILFSAITAGVFAERAYYYAFASPSTGIAQTTFVGIIISRGSAASISFMYSYILLTMCRNLITVLRETFLNHYIPFDAAVDFHRWIAMAALIFSVLHTAGHVVNVYIFSVTPLSVLSCLFSTVFTNDGSQLPQKYYWWFFQTIPGMTGVLLLVVLAVMYVFATRHFRRVSFQGFWITHHLYVLLYILVIIHGSYALIQQPRFYIYFIIPALIYSADKLYSLSRKKVEISVVKAELLPSGVTHLQFQRPQDFDYKSGQWVRIACVGLGTTEYHPFTLTSAPHDDTLSLHIRAVGPWTTRLRELYSPKSLALLGTLPKLYLDGPFGEGHQEWNKFEVSVLVGGGIGVTPFASILKDLVFKSSINSKLLCKKIYFIWVTRTQRQFEWLTDIIREVEESDKNGLVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNKSLFTGLRSITHFGRPPFVPFFSSLQEVHPEVQKIGVFSCGPPGMTKSVEQACRHMNKKDQTYFAHHYENF
SIO_010081: DUOX2
subclass of: SO_0000673
so part of: DUOX2
location: join(1977670..1977715,1978417..1978500,1980283..1980447,1981694..1981881,1982978..1983179,1983932..1984098,1984182..1984242,1984362..1984458,1985387..1985474,1985808..1985910,1986049..1986212,1986631..1986797,1986951..1987069,1987813..1987950,1988540..1988653,1989263..1989465,1989653..1989838,1990259..1990484,1991084..1991177,1991369..1991544,1991759..1991819,1992284..1992379,1993090..1993268,1994069..1994299,1994523..1994622,1994741..1994790,1994941..1995068,1995255..1995408,1995545..1995777,1995926..1996084,1996275..1996430,1996540..1996668,1997097..1997219)
location: region:1977670-1997219:1
so has part: feature:1977670-1977715:1:exon
so has part: feature:1978417-1978500:1:exon
so has part: feature:1980283-1980447:1:exon
so has part: feature:1981694-1981881:1:exon
so has part: feature:1982978-1983179:1:exon
so has part: feature:1983932-1984098:1:exon
so has part: feature:1984182-1984242:1:exon
so has part: feature:1984362-1984458:1:exon
so has part: feature:1985387-1985474:1:exon
so has part: feature:1985808-1985910:1:exon
so has part: feature:1986049-1986212:1:exon
so has part: feature:1986631-1986797:1:exon
so has part: feature:1986951-1987069:1:exon
so has part: feature:1987813-1987950:1:exon
so has part: feature:1988540-1988653:1:exon
so has part: feature:1989263-1989465:1:exon
so has part: feature:1989653-1989838:1:exon
so has part: feature:1990259-1990484:1:exon
so has part: feature:1991084-1991177:1:exon
so has part: feature:1991369-1991544:1:exon
so has part: feature:1991759-1991819:1:exon
so has part: feature:1992284-1992379:1:exon
so has part: feature:1993090-1993268:1:exon
so has part: feature:1994069-1994299:1:exon
so has part: feature:1994523-1994622:1:exon
so has part: feature:1994741-1994790:1:exon
so has part: feature:1994941-1995068:1:exon
so has part: feature:1995255-1995408:1:exon
so has part: feature:1995545-1995777:1:exon
so has part: feature:1995926-1996084:1:exon
so has part: feature:1996275-1996430:1:exon
so has part: feature:1996540-1996668:1:exon
so has part: feature:1997097-1997219:1:exon

XP_054498070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1977670-1977715:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1978417-1978500:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1980283-1980447:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1981694-1981881:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1982978-1983179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1983932-1984098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1984182-1984242:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1984362-1984458:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1985387-1985474:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1985808-1985910:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1986049-1986212:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1986631-1986797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1986951-1987069:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1987813-1987950:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1988540-1988653:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1989263-1989465:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1989653-1989838:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1990259-1990484:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1991084-1991177:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1991369-1991544:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1991759-1991819:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1992284-1992379:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1993090-1993268:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1994069-1994299:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1994523-1994622:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1994741-1994790:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1994941-1995068:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1995255-1995408:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1995545-1995777:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1995926-1996084:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1996275-1996430:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1996540-1996668:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1997097-1997219:1:exon

SORD
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: SORD
note: sorbitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1998840..2018116)
location: region:1998840-2018116:-1
so has part: feature:1998840-2018116:-1:exon
subclass of: SO_0000010

129126275
type: Gene
SIO_000068: ncbigene

position:1998840:-1
position: 1998840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2018116:-1
position: 2018116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1998840-2018116:-1:exon

SORD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: SORD
product: sorbitol dehydrogenase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642116.1
SIO_010081: SORD
subclass of: SO_0000673
so part of: SORD
location: complement(join(1998840..1999944,2001453..2001574,2002388..2002563,2007548..2007613,2007799..2007917,2010692..2010851,2013674..2013838,2014549..2014582,2018003..2018116))
location: region:1998840-2018116:-1
so has part: feature:2018003-2018116:-1:exon
so has part: feature:2014549-2014582:-1:exon
so has part: feature:2013674-2013838:-1:exon
so has part: feature:2010692-2010851:-1:exon
so has part: feature:2007799-2007917:-1:exon
so has part: feature:2007548-2007613:-1:exon
so has part: feature:2002388-2002563:-1:exon
so has part: feature:2001453-2001574:-1:exon
so has part: feature:1998840-1999944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2018003-2018116:-1:exon

position:2018003:-1
position: 2018003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2014549-2014582:-1:exon

position:2014549:-1
position: 2014549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2014582:-1
position: 2014582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2013674-2013838:-1:exon

position:2013674:-1
position: 2013674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2013838:-1
position: 2013838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2010692-2010851:-1:exon

position:2010692:-1
position: 2010692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2010851:-1
position: 2010851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2007799-2007917:-1:exon

position:2007799:-1
position: 2007799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2007917:-1
position: 2007917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2007548-2007613:-1:exon

position:2007548:-1
position: 2007548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2007613:-1
position: 2007613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2002388-2002563:-1:exon

position:2002388:-1
position: 2002388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2002563:-1
position: 2002563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2001453-2001574:-1:exon

position:2001453:-1
position: 2001453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2001574:-1
position: 2001574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1998840-1999944:-1:exon

position:1999944:-1
position: 1999944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SORD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: SORD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorbitol dehydrogenase
translation: MAVPGQNVAVVVHRAGDLRLENRPIPEPGPNEVLLRMHSVGICGSDVHYWQHGRIGDFVVKDPMVLGHEASGTVVKVGSGVTHLKPGDRVAIEPGVPREMDEFCKSGRYNLSPTIFFCATPPDDGNLCRYYKHSASYCYKLPDNVTFEEGALIEPLSVGIHACKRAGVTLGSKVFVSGSGPIGLVNVIVAKMMGAAAVVVTDLSASRLQKAKEVGADFTIQVKNETPQEVASKVESVLGCMPEITVECTGVQACIQAGIYATRSGGTLVLVGLGPEMVTVPIVNAAVREVDIRGIFRYCNTWPVAISLLASKRINVKPLVTHRFPLEKALEAFETTRRGEGVKVMLKCDPTDQNP
SIO_010081: SORD
subclass of: SO_0000673
so part of: SORD
location: complement(join(1999779..1999944,2001453..2001574,2002388..2002563,2007548..2007613,2007799..2007917,2010692..2010851,2013674..2013838,2014549..2014582,2018003..2018062))
location: region:1999779-2018062:-1
so has part: feature:2018003-2018062:-1:exon
so has part: feature:2014549-2014582:-1:exon
so has part: feature:2013674-2013838:-1:exon
so has part: feature:2010692-2010851:-1:exon
so has part: feature:2007799-2007917:-1:exon
so has part: feature:2007548-2007613:-1:exon
so has part: feature:2002388-2002563:-1:exon
so has part: feature:2001453-2001574:-1:exon
so has part: feature:1999779-1999944:-1:exon

XP_054498091.1
type: Protein
SIO_000068: ncbiprotein

position:1999779:-1
position: 1999779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2018062:-1
position: 2018062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2018003-2018062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2014549-2014582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2013674-2013838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2010692-2010851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2007799-2007917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2007548-2007613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2002388-2002563:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2001453-2001574:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1999779-1999944:-1:exon

RBPMS2
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: RBPMS2
note: RNA binding protein, mRNA processing factor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2034267..2058095)
location: region:2034267-2058095:-1
so has part: feature:2034267-2058095:-1:exon
subclass of: SO_0000010

129126418
type: Gene
SIO_000068: ncbigene

position:2034267:-1
position: 2034267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2058095:-1
position: 2058095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2034267-2058095:-1:exon

RBPMS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: RBPMS2
product: RNA binding protein, mRNA processing factor 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642333.1
SIO_010081: RBPMS2
subclass of: SO_0000673
so part of: RBPMS2
location: complement(join(2034267..2034675,2034915..2034984,2043333..2043481,2044047..2044197,2045001..2045063,2045555..2045593,2046215..2046292,2057785..2058095))
location: region:2034267-2058095:-1
so has part: feature:2057785-2058095:-1:exon
so has part: feature:2046215-2046292:-1:exon
so has part: feature:2045555-2045593:-1:exon
so has part: feature:2045001-2045063:-1:exon
so has part: feature:2044047-2044197:-1:exon
so has part: feature:2043333-2043481:-1:exon
so has part: feature:2034915-2034984:-1:exon
so has part: feature:2034267-2034675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2057785-2058095:-1:exon

position:2057785:-1
position: 2057785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2046215-2046292:-1:exon

position:2046215:-1
position: 2046215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2046292:-1
position: 2046292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2045555-2045593:-1:exon

position:2045555:-1
position: 2045555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2045593:-1
position: 2045593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2045001-2045063:-1:exon

position:2045001:-1
position: 2045001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2045063:-1
position: 2045063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2044047-2044197:-1:exon

position:2044047:-1
position: 2044047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2044197:-1
position: 2044197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2043333-2043481:-1:exon

position:2043333:-1
position: 2043333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2043481:-1
position: 2043481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2034915-2034984:-1:exon

position:2034915:-1
position: 2034915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2034984:-1
position: 2034984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2034267-2034675:-1:exon

position:2034675:-1
position: 2034675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBPMS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: RBPMS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein with multiple splicing 2
translation: MSNLNKDTEHTNGGGTVEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRAGAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAKSKLMATPNPTNIHPALGAHFIARDPYDLTGAALIPASPEAWAPYPLYTTELTPAIPHAAFTYPAAAAAAAALHAQMRWYPPSEATQQGWKSRQFC
SIO_010081: RBPMS2
subclass of: SO_0000673
so part of: RBPMS2
location: complement(join(2034922..2034984,2043333..2043481,2044047..2044197,2045001..2045063,2045555..2045593,2046215..2046292,2057785..2057844))
location: region:2034922-2057844:-1
so has part: feature:2057785-2057844:-1:exon
so has part: feature:2046215-2046292:-1:exon
so has part: feature:2045555-2045593:-1:exon
so has part: feature:2045001-2045063:-1:exon
so has part: feature:2044047-2044197:-1:exon
so has part: feature:2043333-2043481:-1:exon
so has part: feature:2034922-2034984:-1:exon

XP_054498308.1
type: Protein
SIO_000068: ncbiprotein

position:2034922:-1
position: 2034922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2057844:-1
position: 2057844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2057785-2057844:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2046215-2046292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2045555-2045593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2045001-2045063:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2044047-2044197:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2043333-2043481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2034922-2034984:-1:exon

OAZ2
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: OAZ2
note: ornithine decarboxylase antizyme 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2084494..2097154
location: region:2084494-2097154:1
so has part: feature:2084494-2097154:1:exon
subclass of: SO_0000010

129126146
type: Gene
SIO_000068: ncbigene

position:2084494:1
position: 2084494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2097154:1
position: 2097154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2084494-2097154:1:exon

OAZ2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: OAZ2
product: ornithine decarboxylase antizyme 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_054641937.1
SIO_010081: OAZ2
subclass of: SO_0000673
so part of: OAZ2
location: join(2084494..2084612,2087808..2087965,2092593..2092768,2094568..2094653,2096403..2097154)
location: region:2084494-2097154:1
so has part: feature:2084494-2084612:1:exon
so has part: feature:2087808-2087965:1:exon
so has part: feature:2092593-2092768:1:exon
so has part: feature:2094568-2094653:1:exon
so has part: feature:2096403-2097154:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2084494-2084612:1:exon

position:2084612:1
position: 2084612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2087808-2087965:1:exon

position:2087808:1
position: 2087808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2087965:1
position: 2087965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2092593-2092768:1:exon

position:2092593:1
position: 2092593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2092768:1
position: 2092768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2094568-2094653:1:exon

position:2094568:1
position: 2094568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2094653:1
position: 2094653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2096403-2097154:1:exon

position:2096403:1
position: 2096403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OAZ2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: OAZ2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ornithine decarboxylase antizyme 2
translation: MINTQDSSILPLSNCPQLQCCRHIVPGPLWCSDAPHPLSKIPGGRGGGRDPSLSALIYKDEKITVSQDVPVHEGKPHIVHFQYKVTEVKTSSWDAVLSNQSLFVEIPDGLLADGSKEGLSALLEFAEEKMKVNYVFICFRKSREDRAPLLKTFSFLGFEIVRPGHPAVPSRPDVMFMVYPLDQSSSSDEE
SIO_010081: OAZ2
subclass of: SO_0000673
so part of: OAZ2
location: join(2084593..2084612,2087808..2087965,2092593..2092768,2094568..2094653,2096403..2096536)
location: region:2084593-2096536:1
so has part: feature:2084593-2084612:1:exon
so has part: feature:2087808-2087965:1:exon
so has part: feature:2092593-2092768:1:exon
so has part: feature:2094568-2094653:1:exon
so has part: feature:2096403-2096536:1:exon

XP_054497912.1
type: Protein
SIO_000068: ncbiprotein

position:2084593:1
position: 2084593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2096536:1
position: 2096536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2084593-2084612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2087808-2087965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2092593-2092768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2094568-2094653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2096403-2096536:1:exon

ZNF609
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: ZNF609
note: zinc finger protein 609; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2098592..2164428)
location: region:2098592-2164428:-1
so has part: feature:2098592-2164428:-1:exon
subclass of: SO_0000010

129126169
type: Gene
SIO_000068: ncbigene

position:2098592:-1
position: 2098592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2164428:-1
position: 2164428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2098592-2164428:-1:exon

ZNF609
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: ZNF609
product: zinc finger protein 609, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641967.1
SIO_010081: ZNF609
subclass of: SO_0000673
so part of: ZNF609
location: complement(join(2098592..2100807,2100954..2101032,2101145..2101361,2101833..2102008,2102168..2102534,2102961..2105322,2105650..2105737,2113320..2113545,2146495..2147359,2164387..2164428))
location: region:2098592-2164428:-1
so has part: feature:2164387-2164428:-1:exon
so has part: feature:2146495-2147359:-1:exon
so has part: feature:2113320-2113545:-1:exon
so has part: feature:2105650-2105737:-1:exon
so has part: feature:2102961-2105322:-1:exon
so has part: feature:2102168-2102534:-1:exon
so has part: feature:2101833-2102008:-1:exon
so has part: feature:2101145-2101361:-1:exon
so has part: feature:2100954-2101032:-1:exon
so has part: feature:2098592-2100807:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2164387-2164428:-1:exon

position:2164387:-1
position: 2164387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2146495-2147359:-1:exon

position:2146495:-1
position: 2146495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2147359:-1
position: 2147359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2113320-2113545:-1:exon

position:2113320:-1
position: 2113320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2113545:-1
position: 2113545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2105650-2105737:-1:exon

position:2105650:-1
position: 2105650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2105737:-1
position: 2105737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2102961-2105322:-1:exon

position:2102961:-1
position: 2102961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2105322:-1
position: 2105322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2102168-2102534:-1:exon

position:2102168:-1
position: 2102168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2102534:-1
position: 2102534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2101833-2102008:-1:exon

position:2101833:-1
position: 2101833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2102008:-1
position: 2102008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2101145-2101361:-1:exon

position:2101145:-1
position: 2101145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2101361:-1
position: 2101361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2100954-2101032:-1:exon

position:2100954:-1
position: 2100954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2101032:-1
position: 2101032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2098592-2100807:-1:exon

position:2100807:-1
position: 2100807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF609
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: ZNF609
product: zinc finger protein 609, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641968.1
SIO_010081: ZNF609
subclass of: SO_0000673
so part of: ZNF609
location: complement(join(2098592..2100807,2100963..2101032,2101145..2101361,2101833..2102008,2102168..2102534,2102961..2105322,2105650..2105737,2113320..2113545,2145892..2145939))
location: region:2098592-2145939:-1
so has part: feature:2145892-2145939:-1:exon
so has part: feature:2113320-2113545:-1:exon
so has part: feature:2105650-2105737:-1:exon
so has part: feature:2102961-2105322:-1:exon
so has part: feature:2102168-2102534:-1:exon
so has part: feature:2101833-2102008:-1:exon
so has part: feature:2101145-2101361:-1:exon
so has part: feature:2100963-2101032:-1:exon
so has part: feature:2098592-2100807:-1:exon

position:2145939:-1
position: 2145939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2145892-2145939:-1:exon

position:2145892:-1
position: 2145892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2113320-2113545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2105650-2105737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2102961-2105322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2102168-2102534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2101833-2102008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2101145-2101361:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2100963-2101032:-1:exon

position:2100963:-1
position: 2100963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2098592-2100807:-1:exon

ZNF609
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ZNF609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 609 isoform X2
translation: MESPVSTPAVLPLHLLVPVVNNDISSPCEQIMVRTRSVGVNTCDVALATEPECLGPCEPGTSVNLEGIVWQETEDGMLVVNVTWRNKTYVGTLLDCTQHDWAPPRFCDSPTSDLEMRNGRGRGKRMRPNSNTPVNETATASDSKGTSNSSKTRAGANSKGRRGSQNSSDHRTPPGGTAEDVKASPSSVTKRKSKPLSDMDLNSSSEDSKGSKRIRTNSMGSATVPPATVKVEPAVLERNCPSPILIDCPHPNCNKKYKHINGLKYHQAHAHTDDDSKLEADVDSEYGEEPSLHADIGSCNGAAGTQKGSLSPARSATPKVRLMEPHSPSPSSKFSAKVPCKKKVGGEGDTDLGALSNDGSEDGPSVADETSNDDFDSLEKRCIDKDKSKKASGAKQEKIPSKSLKSARPIAPAIPPQPIYTFQTATLTTASPGSSAGLATTVVQTMPNSPQLKPIQPKPTVMGEPFAVNPALTPSKEKKKKDKKKKEPKEVENPLTPGKACRAEEGKSPFRGESSELGMKGEGLLNGSSDPHQSRLASIKAEADKIYSFTDNAPSPSIGGASRLENTNPAQPLTPLHVVTQNGAEASSVKTNSPAYSDISDAGEDGEGKLESVKAKDPEQLVKEGAKKALFPPQPQSKESPFYQGFETYYSPGYPQASPGPLNPGGQSAAETQSLKLKKDEEQENPEVKVKSEGCEEKKAELGSGSSQQPSVIQQRPNMYMQSLYYNQYAYVPPYGYSEQGYHAHLLSTNPAYRQQYEEQQKQRQSLEQQQQQQRGLEKKAELGLKEREAALKEEWKQKPPMPPTLTKAPSLTDLVKSGLSKPKEQGGPDMAKSVIIPKLEDSSKLSSSQVAEGLKVKLSEAGHLGKETAETKAGSECGRQAEVDPVLWYRQEAEPRMWTYVYPAKYSDIKTEDERWKEERDRKLKEERNRSKEASSKEDGKESTSSECKLTPTEEARMVGKDPRPSVHVPVSSPLTQHQSYIPYMHGYSYSQSYDPNHPSYRAMPTVMMQNYPGSYLPSSYSFSPYGSKASGSDDSDKSRASPSVSCKSSSESKALDILQQHASHYKSKSPTISEKTSQERERSGCGVVGGSGSCSSVGGAGAGERSGDRPRTSPSQRLLSTHHHHHHLGYSLLPAQYNLPYATGLSSTAIVASQQGSAPSLYPPPRRM
SIO_010081: ZNF609
subclass of: SO_0000673
so part of: ZNF609
location: complement(join(2100801..2100807,2100963..2101032,2101145..2101361,2101833..2102008,2102168..2102534,2102961..2105322,2105650..2105737,2113320..2113545))
location: region:2100801-2113545:-1
so has part: feature:2113320-2113545:-1:exon
so has part: feature:2105650-2105737:-1:exon
so has part: feature:2102961-2105322:-1:exon
so has part: feature:2102168-2102534:-1:exon
so has part: feature:2101833-2102008:-1:exon
so has part: feature:2101145-2101361:-1:exon
so has part: feature:2100963-2101032:-1:exon
so has part: feature:2100801-2100807:-1:exon

XP_054497943.1
type: Protein
SIO_000068: ncbiprotein

position:2100801:-1
position: 2100801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2113320-2113545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2105650-2105737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2102961-2105322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2102168-2102534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2101833-2102008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2101145-2101361:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2100963-2101032:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2100801-2100807:-1:exon

ZNF609
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ZNF609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 609 isoform X1
translation: MSLSSGASGGKGIDANPVETYDSGDEWDIGVGNLIIDLDADLEKDQQKLEMSGSKEVGLPAPNAVATLPDNIKFVSPVPGPQGKEGKSKSKRSKTGKDSGKPTPGSSLFTPSEGAGGKKEVQGRSGDGANSGGLVPAVTPKSSEKSAKASRSVAGSKKEKEGGSSKSKKERSEGAGTAAEKEPSVLQPLALAVRVGQYDGGQGTEPAAAEQLGSIAIDTGAALNPLGVKSELEDGESECRQLKKVKSEKMESPVSTPAVLPLHLLVPVVNNDISSPCEQIMVRTRSVGVNTCDVALATEPECLGPCEPGTSVNLEGIVWQETEDGMLVVNVTWRNKTYVGTLLDCTQHDWAPPRFCDSPTSDLEMRNGRGRGKRMRPNSNTPVNETATASDSKGTSNSSKTRAGANSKGRRGSQNSSDHRTPPGGTAEDVKASPSSVTKRKSKPLSDMDLNSSSEDSKGSKRIRTNSMGSATVPPATVKVEPAVLERNCPSPILIDCPHPNCNKKYKHINGLKYHQAHAHTDDDSKLEADVDSEYGEEPSLHADIGSCNGAAGTQKGSLSPARSATPKVRLMEPHSPSPSSKFSAKVPCKKKVGGEGDTDLGALSNDGSEDGPSVADETSNDDFDSLEKRCIDKDKSKKASGAKQEKIPSKSLKSARPIAPAIPPQPIYTFQTATLTTASPGSSAGLATTVVQTMPNSPQLKPIQPKPTVMGEPFAVNPALTPSKEKKKKDKKKKEPKEVENPLTPGKACRAEEGKSPFRGESSELGMKGEGLLNGSSDPHQSRLASIKAEADKIYSFTDNAPSPSIGGASRLENTNPAQPLTPLHVVTQNGAEASSVKTNSPAYSDISDAGEDGEGKLESVKAKDPEQLVKEGAKKALFPPQPQSKESPFYQGFETYYSPGYPQASPGPLNPGGQSAAETQSLKLKKDEEQENPEVKVKSEGCEEKKAELGSGSSQQPSVIQQRPNMYMQSLYYNQYAYVPPYGYSEQGYHAHLLSTNPAYRQQYEEQQKQRQSLEQQQQQQRGLEKKAELGLKEREAALKEEWKQKPPMPPTLTKAPSLTDLVKSGLSKPKEQGGPDMAKSVIIPKLEDSSKLSSSQVAEGLKVKLSEAGHLGKETAETKAGSECGRQAEVDPVLWYRQEAEPRMWTYVYPAKYSDIKTEDERWKEERDRKLKEERNRSKEASSKEDGKESTSSECKLTPTEEARMVGKDPRPSVHVPVSSPLTQHQSYIPYMHGYSYSQSYDPNHPSYRAMPTVMMQNYPGSYLPSSYSFSPYGSKASGSDDSDKSRASPSVSCKSSSESKALDILQQHASHYKSKSPTISEKTSQERERSGCGVVGGSGSCSSVGGAGAGERSGDRPRTSPSQRLLSTHHHHHHLGYSLLPAQYNLPYATGLSSTAIVASQQGSAPSLYPPPRR
SIO_010081: ZNF609
subclass of: SO_0000673
so part of: ZNF609
location: complement(join(2100959..2101032,2101145..2101361,2101833..2102008,2102168..2102534,2102961..2105322,2105650..2105737,2113320..2113545,2146495..2147241))
location: region:2100959-2147241:-1
so has part: feature:2146495-2147241:-1:exon
so has part: feature:2113320-2113545:-1:exon
so has part: feature:2105650-2105737:-1:exon
so has part: feature:2102961-2105322:-1:exon
so has part: feature:2102168-2102534:-1:exon
so has part: feature:2101833-2102008:-1:exon
so has part: feature:2101145-2101361:-1:exon
so has part: feature:2100959-2101032:-1:exon

XP_054497942.1
type: Protein
SIO_000068: ncbiprotein

position:2100959:-1
position: 2100959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2147241:-1
position: 2147241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2146495-2147241:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2113320-2113545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2105650-2105737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2102961-2105322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2102168-2102534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2101833-2102008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2101145-2101361:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2100959-2101032:-1:exon

TRIP4
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: TRIP4
note: thyroid hormone receptor interactor 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2164330..2194094)
location: region:2164330-2194094:-1
so has part: feature:2164330-2194094:-1:exon
subclass of: SO_0000010

129126170
type: Gene
SIO_000068: ncbigene

position:2164330:-1
position: 2164330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2194094:-1
position: 2194094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2164330-2194094:-1:exon

TRIP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TRIP4
product: thyroid hormone receptor interactor 4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054641969.1
SIO_010081: TRIP4
subclass of: SO_0000673
so part of: TRIP4
location: complement(join(2164330..2164574,2168372..2168474,2182420..2182511,2182818..2182942,2183903..2184090,2184761..2184887,2185212..2185427,2186486..2186615,2188507..2188585,2189796..2190029,2192440..2192576,2193478..2193644,2193990..2194094))
location: region:2164330-2194094:-1
so has part: feature:2193990-2194094:-1:exon
so has part: feature:2193478-2193644:-1:exon
so has part: feature:2192440-2192576:-1:exon
so has part: feature:2189796-2190029:-1:exon
so has part: feature:2188507-2188585:-1:exon
so has part: feature:2186486-2186615:-1:exon
so has part: feature:2185212-2185427:-1:exon
so has part: feature:2184761-2184887:-1:exon
so has part: feature:2183903-2184090:-1:exon
so has part: feature:2182818-2182942:-1:exon
so has part: feature:2182420-2182511:-1:exon
so has part: feature:2168372-2168474:-1:exon
so has part: feature:2164330-2164574:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2193990-2194094:-1:exon

position:2193990:-1
position: 2193990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2193478-2193644:-1:exon

position:2193478:-1
position: 2193478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2193644:-1
position: 2193644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2192440-2192576:-1:exon

position:2192440:-1
position: 2192440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2192576:-1
position: 2192576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2189796-2190029:-1:exon

position:2189796:-1
position: 2189796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2190029:-1
position: 2190029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2188507-2188585:-1:exon

position:2188507:-1
position: 2188507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2188585:-1
position: 2188585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2186486-2186615:-1:exon

position:2186486:-1
position: 2186486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2186615:-1
position: 2186615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2185212-2185427:-1:exon

position:2185212:-1
position: 2185212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2185427:-1
position: 2185427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2184761-2184887:-1:exon

position:2184761:-1
position: 2184761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2184887:-1
position: 2184887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2183903-2184090:-1:exon

position:2183903:-1
position: 2183903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2184090:-1
position: 2184090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2182818-2182942:-1:exon

position:2182818:-1
position: 2182818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2182942:-1
position: 2182942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2182420-2182511:-1:exon

position:2182420:-1
position: 2182420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2182511:-1
position: 2182511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2168372-2168474:-1:exon

position:2168372:-1
position: 2168372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2168474:-1
position: 2168474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2164330-2164574:-1:exon

position:2164574:-1
position: 2164574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TRIP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activating signal cointegrator 1
translation: MAAPSALLAWCVQHLRGDFGLDVGEDVVRYILSITNEEEIREYVVDLVQGTDGKKSWFVEELLSRWRKSAQLPSEPFPAYRKKDEVLDVLRAGDQGKKGKRKGRNRQETPAHPEPTAHGEEVKTPLDLAKAQESSSGVSSSSISCKKKPKYVSLYTREGQDRLAVLIPGRHACECLGQKHKLINNCLECGRIVCEQEGSGPCLFCGALVCTKEEQDILQRDSNKSQKLLKKLMAGAESSGNLDAISKGLLPQQEARLKSGLEMAVKHKDKLLEFDRTSVRRTQVIDDESDYFATDSNQWLSKQEREALQKREQELRELRHASRLAKKITIDFAGRQILEEDNNMAEYHSKLDETIAAMSCGALSEPARSPGAEMTPNSGLLVNPRLLQPAPLWVDQTGLLPQRKSVHSMEAGSECGSERSRLRIQDRELQEISDDGWCLSLHQPWASLLVRGIKRVEGRTWYTSHRGRLWIAATAKRPSPQEISELEATYRMLHRKDVEFPSDYPSGCLLGCVDVTDCLSQEQFQEQYPDLSQESGSPFVFICTNPQEMVLKFPIKGKHKIWKLDAKIHQGAKKGLMKQKAVG
SIO_010081: TRIP4
subclass of: SO_0000673
so part of: TRIP4
location: complement(join(2164507..2164574,2168372..2168474,2182420..2182511,2182818..2182942,2183903..2184090,2184761..2184887,2185212..2185427,2186486..2186615,2188507..2188585,2189796..2190029,2192440..2192576,2193478..2193644,2193990..2194075))
location: region:2164507-2194075:-1
so has part: feature:2193990-2194075:-1:exon
so has part: feature:2193478-2193644:-1:exon
so has part: feature:2192440-2192576:-1:exon
so has part: feature:2189796-2190029:-1:exon
so has part: feature:2188507-2188585:-1:exon
so has part: feature:2186486-2186615:-1:exon
so has part: feature:2185212-2185427:-1:exon
so has part: feature:2184761-2184887:-1:exon
so has part: feature:2183903-2184090:-1:exon
so has part: feature:2182818-2182942:-1:exon
so has part: feature:2182420-2182511:-1:exon
so has part: feature:2168372-2168474:-1:exon
so has part: feature:2164507-2164574:-1:exon

XP_054497944.1
type: Protein
SIO_000068: ncbiprotein

position:2164507:-1
position: 2164507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2194075:-1
position: 2194075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2193990-2194075:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2193478-2193644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2192440-2192576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2189796-2190029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2188507-2188585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2186486-2186615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2185212-2185427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2184761-2184887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2183903-2184090:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2182818-2182942:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2182420-2182511:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2168372-2168474:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2164507-2164574:-1:exon

PCLAF
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: PCLAF
note: PCNA clamp associated factor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2194541..2197819
location: region:2194541-2197819:1
so has part: feature:2194541-2197819:1:exon
subclass of: SO_0000010

129126402
type: Gene
SIO_000068: ncbigene

position:2194541:1
position: 2194541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2197819:1
position: 2197819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2194541-2197819:1:exon

PCLAF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: PCLAF
product: PCNA clamp associated factor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642313.1
SIO_010081: PCLAF
subclass of: SO_0000673
so part of: PCLAF
location: join(2194541..2194586,2194991..2195083,2195906..2196047,2197398..2197819)
location: region:2194541-2197819:1
so has part: feature:2194541-2194586:1:exon
so has part: feature:2194991-2195083:1:exon
so has part: feature:2195906-2196047:1:exon
so has part: feature:2197398-2197819:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2194541-2194586:1:exon

position:2194586:1
position: 2194586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2194991-2195083:1:exon

position:2194991:1
position: 2194991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2195083:1
position: 2195083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2195906-2196047:1:exon

position:2195906:1
position: 2195906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2196047:1
position: 2196047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2197398-2197819:1:exon

position:2197398:1
position: 2197398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCLAF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: PCLAF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PCNA-associated factor
translation: MARTKVDQRGRAFRKVLVARAPRKALGSGGGSSSSVSAGPALPGRRGQRRPVGLNRVCVRPVPAWQRGISDFLQLPSKESRASDGDTPGTSGLEARPLPLDPAEEGECLEEE
SIO_010081: PCLAF
subclass of: SO_0000673
so part of: PCLAF
location: join(2194541..2194586,2194991..2195083,2195906..2196047,2197398..2197455)
location: region:2194541-2197455:1
so has part: feature:2194541-2194586:1:exon
so has part: feature:2194991-2195083:1:exon
so has part: feature:2195906-2196047:1:exon
so has part: feature:2197398-2197455:1:exon

XP_054498288.1
type: Protein
SIO_000068: ncbiprotein

position:2197455:1
position: 2197455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2194541-2194586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2194991-2195083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2195906-2196047:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2197398-2197455:1:exon

CSNK1G1
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: CSNK1G1
note: casein kinase 1 gamma 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2204795..2305884
location: region:2204795-2305884:1
so has part: feature:2204795-2305884:1:exon
subclass of: SO_0000010

129126385
type: Gene
SIO_000068: ncbigene

position:2204795:1
position: 2204795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2305884:1
position: 2305884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2204795-2305884:1:exon

CSNK1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: CSNK1G1
product: casein kinase 1 gamma 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642290.1
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(2204795..2204889,2224608..2224715,2246781..2247197,2253724..2253764,2257942..2258011,2275025..2275176,2280798..2281032,2283355..2283440,2285446..2285530,2287143..2287291,2289326..2289430,2293256..2293363,2297446..2297552,2299708..2299731,2302646..2305884)
location: region:2204795-2305884:1
so has part: feature:2204795-2204889:1:exon
so has part: feature:2224608-2224715:1:exon
so has part: feature:2246781-2247197:1:exon
so has part: feature:2253724-2253764:1:exon
so has part: feature:2257942-2258011:1:exon
so has part: feature:2275025-2275176:1:exon
so has part: feature:2280798-2281032:1:exon
so has part: feature:2283355-2283440:1:exon
so has part: feature:2285446-2285530:1:exon
so has part: feature:2287143-2287291:1:exon
so has part: feature:2289326-2289430:1:exon
so has part: feature:2293256-2293363:1:exon
so has part: feature:2297446-2297552:1:exon
so has part: feature:2299708-2299731:1:exon
so has part: feature:2302646-2305884:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2204795-2204889:1:exon

position:2204889:1
position: 2204889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2224608-2224715:1:exon

position:2224608:1
position: 2224608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2224715:1
position: 2224715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2246781-2247197:1:exon

position:2246781:1
position: 2246781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2247197:1
position: 2247197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2253724-2253764:1:exon

position:2253724:1
position: 2253724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2253764:1
position: 2253764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2257942-2258011:1:exon

position:2257942:1
position: 2257942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2258011:1
position: 2258011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2275025-2275176:1:exon

position:2275025:1
position: 2275025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2275176:1
position: 2275176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2280798-2281032:1:exon

position:2280798:1
position: 2280798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2281032:1
position: 2281032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2283355-2283440:1:exon

position:2283355:1
position: 2283355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2283440:1
position: 2283440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2285446-2285530:1:exon

position:2285446:1
position: 2285446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2285530:1
position: 2285530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2287143-2287291:1:exon

position:2287143:1
position: 2287143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2287291:1
position: 2287291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2289326-2289430:1:exon

position:2289326:1
position: 2289326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2289430:1
position: 2289430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2293256-2293363:1:exon

position:2293256:1
position: 2293256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2293363:1
position: 2293363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2297446-2297552:1:exon

position:2297446:1
position: 2297446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2297552:1
position: 2297552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2299708-2299731:1:exon

position:2299708:1
position: 2299708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2299731:1
position: 2299731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2302646-2305884:1:exon

position:2302646:1
position: 2302646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSNK1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: CSNK1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I
translation: MDHPSRDKDERQRTTKGMPGRSGHGSRPSSSASSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAAEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPVEVLCENFPEEMATYLRYVRRLDFFERPDYDYLRTIFTELFEKKGYTFDYAYDWVGRPIPTPVGSVHVDSGTSAVTRDSHIHRDRPSQQALRNQASSDRRGEWEIQPSRQTNTSYLTSHLAADRHGGSVQVVSSTNGELNVDDPTGAHSNAPITAQAEVEVVEEANCLKMLNLWCCCFFKRKRKKTAQRHK
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(2247020..2247197,2253724..2253764,2257942..2258011,2275025..2275176,2280798..2281032,2283355..2283440,2285446..2285530,2287143..2287291,2289326..2289430,2293256..2293363,2297446..2297552,2299708..2299731,2302646..2302700)
location: region:2247020-2302700:1
so has part: feature:2247020-2247197:1:exon
so has part: feature:2253724-2253764:1:exon
so has part: feature:2257942-2258011:1:exon
so has part: feature:2275025-2275176:1:exon
so has part: feature:2280798-2281032:1:exon
so has part: feature:2283355-2283440:1:exon
so has part: feature:2285446-2285530:1:exon
so has part: feature:2287143-2287291:1:exon
so has part: feature:2289326-2289430:1:exon
so has part: feature:2293256-2293363:1:exon
so has part: feature:2297446-2297552:1:exon
so has part: feature:2299708-2299731:1:exon
so has part: feature:2302646-2302700:1:exon

XP_054498265.1
type: Protein
SIO_000068: ncbiprotein

position:2247020:1
position: 2247020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2302700:1
position: 2302700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2247020-2247197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2253724-2253764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2257942-2258011:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2275025-2275176:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2280798-2281032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2283355-2283440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2285446-2285530:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2287143-2287291:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2289326-2289430:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2293256-2293363:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2297446-2297552:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2299708-2299731:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2302646-2302700:1:exon

PPIB
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: PPIB
note: peptidylprolyl isomerase B; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2307175..2309162
location: region:2307175-2309162:1
so has part: feature:2307175-2309162:1:exon
subclass of: SO_0000010

129126299
type: Gene
SIO_000068: ncbigene

position:2307175:1
position: 2307175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2309162:1
position: 2309162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2307175-2309162:1:exon

PPIB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: PPIB
product: peptidylprolyl isomerase B
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642157.1
SIO_010081: PPIB
subclass of: SO_0000673
so part of: PPIB
location: join(2307175..2307361,2307826..2307939,2308074..2308167,2308555..2308739,2308835..2309162)
location: region:2307175-2309162:1
so has part: feature:2307175-2307361:1:exon
so has part: feature:2307826-2307939:1:exon
so has part: feature:2308074-2308167:1:exon
so has part: feature:2308555-2308739:1:exon
so has part: feature:2308835-2309162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2307175-2307361:1:exon

position:2307361:1
position: 2307361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2307826-2307939:1:exon

position:2307826:1
position: 2307826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2307939:1
position: 2307939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2308074-2308167:1:exon

position:2308074:1
position: 2308074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2308167:1
position: 2308167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2308555-2308739:1:exon

position:2308555:1
position: 2308555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2308739:1
position: 2308739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2308835-2309162:1:exon

position:2308835:1
position: 2308835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPIB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: PPIB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase B
translation: MPAARRALWPGCERRRMKVLVAAAALGAALLLLLPAASRADERKKGPKVTAKVFFDLRIGEEDVGRVVIGLFGKTVPKTVENFMALATGEKGFGFKGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTPWLDGKHVVFGKVLEGMDVVRKVESTKTDSRDKPLKDVTIVDCGTIEVEKPFAIAKE
SIO_010081: PPIB
subclass of: SO_0000673
so part of: PPIB
location: join(2307206..2307361,2307826..2307939,2308074..2308167,2308555..2308739,2308835..2308957)
location: region:2307206-2308957:1
so has part: feature:2307206-2307361:1:exon
so has part: feature:2307826-2307939:1:exon
so has part: feature:2308074-2308167:1:exon
so has part: feature:2308555-2308739:1:exon
so has part: feature:2308835-2308957:1:exon

XP_054498132.1
type: Protein
SIO_000068: ncbiprotein

position:2307206:1
position: 2307206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2308957:1
position: 2308957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2307206-2307361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2307826-2307939:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2308074-2308167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2308555-2308739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2308835-2308957:1:exon

SNX22
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: SNX22
note: sorting nexin 22; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2309337..2314388)
location: region:2309337-2314388:-1
so has part: feature:2309337-2314388:-1:exon
subclass of: SO_0000010

129126300
type: Gene
SIO_000068: ncbigene

position:2309337:-1
position: 2309337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2314388:-1
position: 2314388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2309337-2314388:-1:exon

SNX22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: SNX22
product: sorting nexin 22, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642161.1
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(2309337..2309704,2309834..2309939,2310041..2310135,2310242..2310346,2310435..2310518,2313922..2314388))
location: region:2309337-2314388:-1
so has part: feature:2313922-2314388:-1:exon
so has part: feature:2310435-2310518:-1:exon
so has part: feature:2310242-2310346:-1:exon
so has part: feature:2310041-2310135:-1:exon
so has part: feature:2309834-2309939:-1:exon
so has part: feature:2309337-2309704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2313922-2314388:-1:exon

position:2313922:-1
position: 2313922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2310435-2310518:-1:exon

position:2310435:-1
position: 2310435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2310518:-1
position: 2310518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2310242-2310346:-1:exon

position:2310242:-1
position: 2310242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2310346:-1
position: 2310346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2310041-2310135:-1:exon

position:2310041:-1
position: 2310041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2310135:-1
position: 2310135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2309834-2309939:-1:exon

position:2309834:-1
position: 2309834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2309939:-1
position: 2309939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2309337-2309704:-1:exon

position:2309704:-1
position: 2309704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNX22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: SNX22
product: sorting nexin 22, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642160.1
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(2309337..2309704,2309834..2309907,2310041..2310135,2310242..2310346,2310435..2310518,2313922..2314384))
location: region:2309337-2314384:-1
so has part: feature:2313922-2314384:-1:exon
so has part: feature:2310435-2310518:-1:exon
so has part: feature:2310242-2310346:-1:exon
so has part: feature:2310041-2310135:-1:exon
so has part: feature:2309834-2309907:-1:exon
so has part: feature:2309337-2309704:-1:exon

position:2314384:-1
position: 2314384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2313922-2314384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2310435-2310518:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2310242-2310346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2310041-2310135:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2309834-2309907:-1:exon

position:2309907:-1
position: 2309907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2309337-2309704:-1:exon

SNX22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: SNX22
product: sorting nexin 22, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642159.1
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(2309337..2309704,2309834..2309910,2310041..2310135,2310242..2310346,2310435..2310518,2313922..2314378))
location: region:2309337-2314378:-1
so has part: feature:2313922-2314378:-1:exon
so has part: feature:2310435-2310518:-1:exon
so has part: feature:2310242-2310346:-1:exon
so has part: feature:2310041-2310135:-1:exon
so has part: feature:2309834-2309910:-1:exon
so has part: feature:2309337-2309704:-1:exon

position:2314378:-1
position: 2314378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2313922-2314378:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2310435-2310518:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2310242-2310346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2310041-2310135:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2309834-2309910:-1:exon

position:2309910:-1
position: 2309910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2309337-2309704:-1:exon

SNX22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: SNX22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-22 isoform X2
translation: MIAVSIPAAEPPAAAARSPERAHTLFRVEVLCNGRRHTVTKRYSEFQALHKRIKKTCKVPDFPPRHVPNWMPKALEQRRQALEVYLQGVLYHNKELPQDILDFLKVPRCQQSPKASSPPTRVLPPQRPIVGFCLDPYMRPRGPELLPNTILSGVLQGLYLPLSRVPAWQHPQPLE
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(2309607..2309704,2309834..2309907,2310041..2310135,2310242..2310346,2310435..2310518,2313922..2313993))
location: region:2309607-2313993:-1
so has part: feature:2313922-2313993:-1:exon
so has part: feature:2310435-2310518:-1:exon
so has part: feature:2310242-2310346:-1:exon
so has part: feature:2310041-2310135:-1:exon
so has part: feature:2309834-2309907:-1:exon
so has part: feature:2309607-2309704:-1:exon

XP_054498135.1
type: Protein
SIO_000068: ncbiprotein

position:2309607:-1
position: 2309607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2313993:-1
position: 2313993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2313922-2313993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2310435-2310518:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2310242-2310346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2310041-2310135:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2309834-2309907:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2309607-2309704:-1:exon

SNX22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: SNX22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-22 isoform X1
translation: MIAVSIPAAEPPAAAARSPERAHTLFRVEVLCNGRRHTVTKRYSEFQALHKRIKKTCKVPDFPPRHVPNWMPKALEQRRQALEVYLQGVLYHNKELPQDILDFLKVPRCQQSPKASSPPSTRVLPPQRPIVGFCLDPYMRPRGPELLPNTILSGVLQGLYLPLSRVPAWQHPQPLE
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(2309607..2309704,2309834..2309910,2310041..2310135,2310242..2310346,2310435..2310518,2313922..2313993))
location: region:2309607-2313993:-1
so has part: feature:2313922-2313993:-1:exon
so has part: feature:2310435-2310518:-1:exon
so has part: feature:2310242-2310346:-1:exon
so has part: feature:2310041-2310135:-1:exon
so has part: feature:2309834-2309910:-1:exon
so has part: feature:2309607-2309704:-1:exon

XP_054498134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2313922-2313993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2310435-2310518:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2310242-2310346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2310041-2310135:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2309834-2309910:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2309607-2309704:-1:exon

SNX22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: SNX22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-22 isoform X3
translation: MIAVSIPAAEPPAAAARSPERAHTLFRVEVLCNGRRHTVTKRYSEFQALHKRIKKTCKVPDFPPRHVPNWMPKALEQRRQALEVYLQGVLYHNKELPQDILDFLKVPRCQQSPKASSPPLRTGVPSPTAAPESCPPSAPLSASAWIPTCGHAALSCSPTPSSAGSCRASTSP
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(2309648..2309704,2309834..2309939,2310041..2310135,2310242..2310346,2310435..2310518,2313922..2313993))
location: region:2309648-2313993:-1
so has part: feature:2313922-2313993:-1:exon
so has part: feature:2310435-2310518:-1:exon
so has part: feature:2310242-2310346:-1:exon
so has part: feature:2310041-2310135:-1:exon
so has part: feature:2309834-2309939:-1:exon
so has part: feature:2309648-2309704:-1:exon

XP_054498136.1
type: Protein
SIO_000068: ncbiprotein

position:2309648:-1
position: 2309648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2313922-2313993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2310435-2310518:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2310242-2310346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2310041-2310135:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2309834-2309939:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2309648-2309704:-1:exon

SNX1
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: SNX1
note: sorting nexin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2314586..2326539)
location: region:2314586-2326539:-1
so has part: feature:2314586-2326539:-1:exon
subclass of: SO_0000010

129126260
type: Gene
SIO_000068: ncbigene

position:2314586:-1
position: 2314586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2326539:-1
position: 2326539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2314586-2326539:-1:exon

SNX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: SNX1
product: sorting nexin 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642099.1
SIO_010081: SNX1
subclass of: SO_0000673
so part of: SNX1
location: complement(join(2314586..2314999,2315125..2315196,2315480..2315560,2315910..2316053,2316626..2316831,2317740..2317833,2317960..2318073,2318738..2318813,2319064..2319142,2319632..2319773,2320716..2320759,2321820..2321886,2322377..2322510,2323346..2323448,2326399..2326539))
location: region:2314586-2326539:-1
so has part: feature:2326399-2326539:-1:exon
so has part: feature:2323346-2323448:-1:exon
so has part: feature:2322377-2322510:-1:exon
so has part: feature:2321820-2321886:-1:exon
so has part: feature:2320716-2320759:-1:exon
so has part: feature:2319632-2319773:-1:exon
so has part: feature:2319064-2319142:-1:exon
so has part: feature:2318738-2318813:-1:exon
so has part: feature:2317960-2318073:-1:exon
so has part: feature:2317740-2317833:-1:exon
so has part: feature:2316626-2316831:-1:exon
so has part: feature:2315910-2316053:-1:exon
so has part: feature:2315480-2315560:-1:exon
so has part: feature:2315125-2315196:-1:exon
so has part: feature:2314586-2314999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2326399-2326539:-1:exon

position:2326399:-1
position: 2326399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2323346-2323448:-1:exon

position:2323346:-1
position: 2323346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2323448:-1
position: 2323448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2322377-2322510:-1:exon

position:2322377:-1
position: 2322377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2322510:-1
position: 2322510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2321820-2321886:-1:exon

position:2321820:-1
position: 2321820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2321886:-1
position: 2321886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2320716-2320759:-1:exon

position:2320716:-1
position: 2320716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2320759:-1
position: 2320759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2319632-2319773:-1:exon

position:2319632:-1
position: 2319632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2319773:-1
position: 2319773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2319064-2319142:-1:exon

position:2319064:-1
position: 2319064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2319142:-1
position: 2319142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2318738-2318813:-1:exon

position:2318738:-1
position: 2318738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2318813:-1
position: 2318813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2317960-2318073:-1:exon

position:2317960:-1
position: 2317960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2318073:-1
position: 2318073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2317740-2317833:-1:exon

position:2317740:-1
position: 2317740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2317833:-1
position: 2317833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2316626-2316831:-1:exon

position:2316626:-1
position: 2316626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2316831:-1
position: 2316831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2315910-2316053:-1:exon

position:2315910:-1
position: 2315910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2316053:-1
position: 2316053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2315480-2315560:-1:exon

position:2315480:-1
position: 2315480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2315560:-1
position: 2315560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2315125-2315196:-1:exon

position:2315125:-1
position: 2315125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2315196:-1
position: 2315196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2314586-2314999:-1:exon

position:2314999:-1
position: 2314999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: SNX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-1
translation: MASGGSRGSRSPSPAERRPPPFPEHRGLGAPDSDSEGEDIFTGSSNSPALKEEPPLPVSSSSKENGVHVEQDDQDLFADATVELSLDNTQNNQKKEVAKPSSPLPSLDVAASSSRNLSKSYEELEEEEQEDKFDLTVGVSDPEKVGDGMNAYVAYKVSTQTSMPMFRSKQFSVKRRFSDFLGLYEKLSEKHAQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLRRVVSHPTMLQDPDVREFLEKEELPRAVGTQTLSGAGIMKMFNKATDAVSKMTIKMNESDMWFEEKLQEVECEDQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHHEQANNDFFLLAELLGDYIRLLSVVKGAFDQRMRTWQRWQDAQTMLQKKREMEARLLWANKPDKLQQAKDEISEWESRVTQYERDFERISAVIRKEVIRFEKEKSKDFRNHVTKYLETLLNSQQQLVKYWEAFLPEAKAIS
SIO_010081: SNX1
subclass of: SO_0000673
so part of: SNX1
location: complement(join(2314949..2314999,2315125..2315196,2315480..2315560,2315910..2316053,2316626..2316831,2317740..2317833,2317960..2318073,2318738..2318813,2319064..2319142,2319632..2319773,2320716..2320759,2321820..2321886,2322377..2322510,2323346..2323448,2326399..2326530))
location: region:2314949-2326530:-1
so has part: feature:2326399-2326530:-1:exon
so has part: feature:2323346-2323448:-1:exon
so has part: feature:2322377-2322510:-1:exon
so has part: feature:2321820-2321886:-1:exon
so has part: feature:2320716-2320759:-1:exon
so has part: feature:2319632-2319773:-1:exon
so has part: feature:2319064-2319142:-1:exon
so has part: feature:2318738-2318813:-1:exon
so has part: feature:2317960-2318073:-1:exon
so has part: feature:2317740-2317833:-1:exon
so has part: feature:2316626-2316831:-1:exon
so has part: feature:2315910-2316053:-1:exon
so has part: feature:2315480-2315560:-1:exon
so has part: feature:2315125-2315196:-1:exon
so has part: feature:2314949-2314999:-1:exon

XP_054498074.1
type: Protein
SIO_000068: ncbiprotein

position:2314949:-1
position: 2314949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2326530:-1
position: 2326530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2326399-2326530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2323346-2323448:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2322377-2322510:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2321820-2321886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2320716-2320759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2319632-2319773:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2319064-2319142:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2318738-2318813:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2317960-2318073:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2317740-2317833:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2316626-2316831:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2315910-2316053:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2315480-2315560:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2315125-2315196:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2314949-2314999:-1:exon

PATL2
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: PATL2
note: PAT1 homolog 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2329508..2335020)
location: region:2329508-2335020:-1
so has part: feature:2329508-2335020:-1:exon
subclass of: SO_0000010

129126386
type: Gene
SIO_000068: ncbigene

position:2329508:-1
position: 2329508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2335020:-1
position: 2335020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2329508-2335020:-1:exon

PATL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: PATL2
product: PAT1 homolog 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_054642291.1
SIO_010081: PATL2
subclass of: SO_0000673
so part of: PATL2
location: complement(join(2329508..2329636,2329824..2329976,2330054..2330151,2330229..2330369,2330646..2330805,2331051..2331193,2331352..2331396,2331665..2331765,2331846..2331960,2332072..2332210,2332286..2332363,2332469..2332623,2332812..2332898,2333011..2333178,2333543..2333608,2333717..2333785,2333905..2334191,2334313..2334415,2334850..2335020))
location: region:2329508-2335020:-1
so has part: feature:2334850-2335020:-1:exon
so has part: feature:2334313-2334415:-1:exon
so has part: feature:2333905-2334191:-1:exon
so has part: feature:2333717-2333785:-1:exon
so has part: feature:2333543-2333608:-1:exon
so has part: feature:2333011-2333178:-1:exon
so has part: feature:2332812-2332898:-1:exon
so has part: feature:2332469-2332623:-1:exon
so has part: feature:2332286-2332363:-1:exon
so has part: feature:2332072-2332210:-1:exon
so has part: feature:2331846-2331960:-1:exon
so has part: feature:2331665-2331765:-1:exon
so has part: feature:2331352-2331396:-1:exon
so has part: feature:2331051-2331193:-1:exon
so has part: feature:2330646-2330805:-1:exon
so has part: feature:2330229-2330369:-1:exon
so has part: feature:2330054-2330151:-1:exon
so has part: feature:2329824-2329976:-1:exon
so has part: feature:2329508-2329636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2334850-2335020:-1:exon

position:2334850:-1
position: 2334850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2334313-2334415:-1:exon

position:2334313:-1
position: 2334313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2334415:-1
position: 2334415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2333905-2334191:-1:exon

position:2333905:-1
position: 2333905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2334191:-1
position: 2334191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2333717-2333785:-1:exon

position:2333717:-1
position: 2333717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2333785:-1
position: 2333785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2333543-2333608:-1:exon

position:2333543:-1
position: 2333543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2333608:-1
position: 2333608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2333011-2333178:-1:exon

position:2333011:-1
position: 2333011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2333178:-1
position: 2333178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2332812-2332898:-1:exon

position:2332812:-1
position: 2332812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2332898:-1
position: 2332898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2332469-2332623:-1:exon

position:2332469:-1
position: 2332469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2332623:-1
position: 2332623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2332286-2332363:-1:exon

position:2332286:-1
position: 2332286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2332363:-1
position: 2332363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2332072-2332210:-1:exon

position:2332072:-1
position: 2332072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2332210:-1
position: 2332210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2331846-2331960:-1:exon

position:2331846:-1
position: 2331846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2331960:-1
position: 2331960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2331665-2331765:-1:exon

position:2331665:-1
position: 2331665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2331765:-1
position: 2331765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2331352-2331396:-1:exon

position:2331352:-1
position: 2331352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2331396:-1
position: 2331396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2331051-2331193:-1:exon

position:2331051:-1
position: 2331051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2331193:-1
position: 2331193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2330646-2330805:-1:exon

position:2330646:-1
position: 2330646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2330805:-1
position: 2330805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2330229-2330369:-1:exon

position:2330229:-1
position: 2330229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2330369:-1
position: 2330369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2330054-2330151:-1:exon

position:2330054:-1
position: 2330054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2330151:-1
position: 2330151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2329824-2329976:-1:exon

position:2329824:-1
position: 2329824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2329976:-1
position: 2329976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2329508-2329636:-1:exon

position:2329636:-1
position: 2329636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PATL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: PATL2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein PAT1 homolog 2
translation: MLYGRRMPGRWGRPIKGAAGALWPRTGTRDDGGWVSGRRRRRHHRGMAEGGERVIVEDFLLVEDALLLEEMAEEDEELDLYNEMTFGLDRDSTEEDVPKLLVVPEISPEVAKALVEATGRAAEELAKEEGGMEPEMEQVNPQLEEEVEELATEEREEDQECFEEPSELGDPAVMRAVRSKPTLESQDSAVLDSGIGTCWEEFDKEDMLAMDPTAWGSCPGSVPRHLMLEDKAILQVLERPPPSTNMALDFLGSPVQRGYGGSSRLKCPDLRLMSPKPYPQCFLQQAPLVSPRSPCSPQPFPPACRPPALFSPSQTAGFAPPSPFQPGSPTVGSPPQPLGVHFRPMASSLDPAVFFSPSATGQLNFSTPSHMTQLHPQHQRILMQRQGRQVQSVSPKKLWSRKVDPYAGLMTSKEKDWVVKVEMMQLQSENIDDDYYYQTYYHRLERKQAEEELLGRRNKPPKLVTPFIQKVETYDSVVRIAGSLGQVTVSTCYSPRRAIDAVHHALVEEEAAGTHRLRALHRIEKLFLQLLEVEEVQQKMSLGEQQPQKQEQKSQKVESIYQALKIRACSSEEEAEDEFLQLLCVRKGKKLVARLLPHLIGEQREKILLAITYHLPFLMKKDMLDESLPLLYSPLNEVVGEMTFSKLIEVLQELTRPLPESSELPLTMALKNQFGISLLYSLLSHGERLLSSHAPLKPCRGDFEAWTDTVYLMSQELSRLPTASLAEPLFLPSNLVLLFCRYLDKQTVYHLAAKMAECSPLPTEADMLC
SIO_010081: PATL2
subclass of: SO_0000673
so part of: PATL2
location: complement(join(2329597..2329636,2329824..2329976,2330054..2330151,2330229..2330369,2330646..2330805,2331051..2331193,2331352..2331396,2331665..2331765,2331846..2331960,2332072..2332210,2332286..2332363,2332469..2332623,2332812..2332898,2333011..2333178,2333543..2333608,2333717..2333785,2333905..2334191,2334313..2334415,2334850..2335012))
location: region:2329597-2335012:-1
so has part: feature:2334850-2335012:-1:exon
so has part: feature:2334313-2334415:-1:exon
so has part: feature:2333905-2334191:-1:exon
so has part: feature:2333717-2333785:-1:exon
so has part: feature:2333543-2333608:-1:exon
so has part: feature:2333011-2333178:-1:exon
so has part: feature:2332812-2332898:-1:exon
so has part: feature:2332469-2332623:-1:exon
so has part: feature:2332286-2332363:-1:exon
so has part: feature:2332072-2332210:-1:exon
so has part: feature:2331846-2331960:-1:exon
so has part: feature:2331665-2331765:-1:exon
so has part: feature:2331352-2331396:-1:exon
so has part: feature:2331051-2331193:-1:exon
so has part: feature:2330646-2330805:-1:exon
so has part: feature:2330229-2330369:-1:exon
so has part: feature:2330054-2330151:-1:exon
so has part: feature:2329824-2329976:-1:exon
so has part: feature:2329597-2329636:-1:exon

XP_054498266.1
type: Protein
SIO_000068: ncbiprotein

position:2329597:-1
position: 2329597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2335012:-1
position: 2335012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2334850-2335012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2334313-2334415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2333905-2334191:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2333717-2333785:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2333543-2333608:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2333011-2333178:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2332812-2332898:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2332469-2332623:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2332286-2332363:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2332072-2332210:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2331846-2331960:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2331665-2331765:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2331352-2331396:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2331051-2331193:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2330646-2330805:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2330229-2330369:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2330054-2330151:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2329824-2329976:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2329597-2329636:-1:exon

B2M
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: B2M
note: beta-2-microglobulin; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2337229..2339882
location: region:2337229-2339882:1
so has part: feature:2337229-2339882:1:exon
subclass of: SO_0000010

129126387
type: Gene
SIO_000068: ncbigene

position:2337229:1
position: 2337229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2339882:1
position: 2339882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2337229-2339882:1:exon

B2M
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: B2M
product: beta-2-microglobulin
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642292.1
SIO_010081: B2M
subclass of: SO_0000673
so part of: B2M
location: join(2337229..2337341,2337500..2337778,2338237..2338272,2339460..2339882)
location: region:2337229-2339882:1
so has part: feature:2337229-2337341:1:exon
so has part: feature:2337500-2337778:1:exon
so has part: feature:2338237-2338272:1:exon
so has part: feature:2339460-2339882:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2337229-2337341:1:exon

position:2337341:1
position: 2337341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2337500-2337778:1:exon

position:2337500:1
position: 2337500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2337778:1
position: 2337778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2338237-2338272:1:exon

position:2338237:1
position: 2338237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2338272:1
position: 2338272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2339460-2339882:1:exon

position:2339460:1
position: 2339460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

B2M
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: B2M
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-2-microglobulin
translation: MARGALALGVFALLALLGLGAAAEAPKVEVYARSRAEVGKANTLHCFVSGFHPPKIDIELLKNGVPVPGVTYGDLSFNDKWQFQRLVYAPFIPTREDIFSCRVAHSTMPAAHDYVWEPDF
SIO_010081: B2M
subclass of: SO_0000673
so part of: B2M
location: join(2337272..2337341,2337500..2337778,2338237..2338250)
location: region:2337272-2338250:1
so has part: feature:2337272-2337341:1:exon
so has part: feature:2337500-2337778:1:exon
so has part: feature:2338237-2338250:1:exon

XP_054498267.1
type: Protein
SIO_000068: ncbiprotein

position:2337272:1
position: 2337272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2338250:1
position: 2338250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2337272-2337341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2337500-2337778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2338237-2338250:1:exon

TERB2
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: TERB2
note: telomere repeat binding bouquet formation protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2339931..2348116
location: region:2339931-2348116:1
so has part: feature:2339931-2348116:1:exon
subclass of: SO_0000010

129126390
type: Gene
SIO_000068: ncbigene

position:2339931:1
position: 2339931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2348116:1
position: 2348116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2339931-2348116:1:exon

TERB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TERB2
product: telomere repeat binding bouquet formation protein 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642298.1
SIO_010081: TERB2
subclass of: SO_0000673
so part of: TERB2
location: join(2339931..2342072,2342503..2342584,2344015..2344160,2345022..2345080,2347253..2347341,2347446..2348116)
location: region:2339931-2348116:1
so has part: feature:2339931-2342072:1:exon
so has part: feature:2342503-2342584:1:exon
so has part: feature:2344015-2344160:1:exon
so has part: feature:2345022-2345080:1:exon
so has part: feature:2347253-2347341:1:exon
so has part: feature:2347446-2348116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2339931-2342072:1:exon

position:2342072:1
position: 2342072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2342503-2342584:1:exon

position:2342503:1
position: 2342503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2342584:1
position: 2342584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2344015-2344160:1:exon

position:2344015:1
position: 2344015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2344160:1
position: 2344160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2345022-2345080:1:exon

position:2345022:1
position: 2345022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2345080:1
position: 2345080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2347253-2347341:1:exon

position:2347253:1
position: 2347253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2347341:1
position: 2347341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2347446-2348116:1:exon

position:2347446:1
position: 2347446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TERB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TERB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomere repeats-binding bouquet formation protein 2 isoform X3
translation: MFRGHRAWFSQSVSPGPRGLWADGGGTIAHWLDADYLFSSDAAHPDTRSIHESLSYLEGKATVFHSCYLSVCASTRAAERPSVVLGHFVLPPACLHEEIRRKIGRFIWEKADTLEEQPNENLTEEPEAARNSCEEKSEEEVLDLAESSEETESEAPTQGEFPCRALQEYPINNMVTGK
SIO_010081: TERB2
subclass of: SO_0000673
so part of: TERB2
location: join(2342009..2342072,2342503..2342584,2344015..2344160,2345022..2345080,2347253..2347341,2347446..2347542)
location: region:2342009-2347542:1
so has part: feature:2342009-2342072:1:exon
so has part: feature:2342503-2342584:1:exon
so has part: feature:2344015-2344160:1:exon
so has part: feature:2345022-2345080:1:exon
so has part: feature:2347253-2347341:1:exon
so has part: feature:2347446-2347542:1:exon

XP_054498273.1
type: Protein
SIO_000068: ncbiprotein

position:2342009:1
position: 2342009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2347542:1
position: 2347542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2342009-2342072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2342503-2342584:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2344015-2344160:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2345022-2345080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2347253-2347341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2347446-2347542:1:exon

TERB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TERB2
product: telomere repeat binding bouquet formation protein 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642297.1
SIO_010081: TERB2
subclass of: SO_0000673
so part of: TERB2
location: join(2342085..2342584,2344015..2344160,2345022..2345080,2347253..2347341,2347449..2348116)
location: region:2342085-2348116:1
so has part: feature:2342085-2342584:1:exon
so has part: feature:2344015-2344160:1:exon
so has part: feature:2345022-2345080:1:exon
so has part: feature:2347253-2347341:1:exon
so has part: feature:2347449-2348116:1:exon

position:2342085:1
position: 2342085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2342085-2342584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2344015-2344160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2345022-2345080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2347253-2347341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2347449-2348116:1:exon

position:2347449:1
position: 2347449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TERB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: TERB2
product: telomere repeat binding bouquet formation protein 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642296.1
SIO_010081: TERB2
subclass of: SO_0000673
so part of: TERB2
location: join(2342096..2342584,2344015..2344160,2345022..2345080,2347253..2347341,2347446..2348116)
location: region:2342096-2348116:1
so has part: feature:2342096-2342584:1:exon
so has part: feature:2344015-2344160:1:exon
so has part: feature:2345022-2345080:1:exon
so has part: feature:2347253-2347341:1:exon
so has part: feature:2347446-2348116:1:exon

position:2342096:1
position: 2342096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2342096-2342584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2344015-2344160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2345022-2345080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2347253-2347341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2347446-2348116:1:exon

TERB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TERB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomere repeats-binding bouquet formation protein 2 isoform X1
translation: MGIPQPWRAVTASTSGPISAAPQAAVPSPGHPEVGTPGCPRSPGSLSPAADGGGTIAHWLDADYLFSSDAAHPDTRSIHESLSYLEGKATVFHSCYLSVCASTRAAERPSVVLGHFVLPPACLHEEIRRKIGRFIWEKADTLEEQPNENLTEEPEAARNSCEEKSEEEVLDLAESSEETESEAPTQGEFPCRALQEYPINNMVTGK
SIO_010081: TERB2
subclass of: SO_0000673
so part of: TERB2
location: join(2342355..2342584,2344015..2344160,2345022..2345080,2347253..2347341,2347446..2347542)
location: region:2342355-2347542:1
so has part: feature:2342355-2342584:1:exon
so has part: feature:2344015-2344160:1:exon
so has part: feature:2345022-2345080:1:exon
so has part: feature:2347253-2347341:1:exon
so has part: feature:2347446-2347542:1:exon

XP_054498271.1
type: Protein
SIO_000068: ncbiprotein

position:2342355:1
position: 2342355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2342355-2342584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2344015-2344160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2345022-2345080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2347253-2347341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2347446-2347542:1:exon

TERB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: TERB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomere repeats-binding bouquet formation protein 2 isoform X2
translation: MGIPQPWRAVTASTSGPISAAPQAAVPSPGHPEVGTPGCPRSPGSLSPAADGGGTIAHWLDADYLFSSDAAHPDTRSIHESLSYLEGKATVFHSCYLSVCASTRAAERPSVVLGHFVLPPACLHEEIRRKIGRFIWEKADTLEEQPNENLTEEPEAARNSCEEKSEEEVLDLAESEETESEAPTQGEFPCRALQEYPINNMVTGK
SIO_010081: TERB2
subclass of: SO_0000673
so part of: TERB2
location: join(2342355..2342584,2344015..2344160,2345022..2345080,2347253..2347341,2347449..2347542)
location: region:2342355-2347542:1
so has part: feature:2342355-2342584:1:exon
so has part: feature:2344015-2344160:1:exon
so has part: feature:2345022-2345080:1:exon
so has part: feature:2347253-2347341:1:exon
so has part: feature:2347449-2347542:1:exon

XP_054498272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2342355-2342584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2344015-2344160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2345022-2345080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2347253-2347341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2347449-2347542:1:exon

RPS17
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: RPS17
note: ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2348414..2351007)
location: region:2348414-2351007:-1
so has part: feature:2348414-2351007:-1:exon
subclass of: SO_0000010

129126391
type: Gene
SIO_000068: ncbigene

position:2348414:-1
position: 2348414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2351007:-1
position: 2351007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2348414-2351007:-1:exon

RPS17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: RPS17
product: ribosomal protein S17
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054642299.1
SIO_010081: RPS17
subclass of: SO_0000673
so part of: RPS17
location: complement(join(2348414..2348538,2348922..2348987,2350008..2350113,2350569..2350720,2350928..2351007))
location: region:2348414-2351007:-1
so has part: feature:2350928-2351007:-1:exon
so has part: feature:2350569-2350720:-1:exon
so has part: feature:2350008-2350113:-1:exon
so has part: feature:2348922-2348987:-1:exon
so has part: feature:2348414-2348538:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2350928-2351007:-1:exon

position:2350928:-1
position: 2350928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2350569-2350720:-1:exon

position:2350569:-1
position: 2350569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2350720:-1
position: 2350720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2350008-2350113:-1:exon

position:2350008:-1
position: 2350008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2350113:-1
position: 2350113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2348922-2348987:-1:exon

position:2348922:-1
position: 2348922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2348987:-1
position: 2348987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2348414-2348538:-1:exon

position:2348538:-1
position: 2348538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: RPS17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S17
translation: MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAL
SIO_010081: RPS17
subclass of: SO_0000673
so part of: RPS17
location: complement(join(2348458..2348538,2348922..2348987,2350008..2350113,2350569..2350720,2350928..2350930))
location: region:2348458-2350930:-1
so has part: feature:2350928-2350930:-1:exon
so has part: feature:2350569-2350720:-1:exon
so has part: feature:2350008-2350113:-1:exon
so has part: feature:2348922-2348987:-1:exon
so has part: feature:2348458-2348538:-1:exon

XP_054498274.1
type: Protein
SIO_000068: ncbiprotein

position:2348458:-1
position: 2348458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2350930:-1
position: 2350930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2350928-2350930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2350569-2350720:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2350008-2350113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2348922-2348987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2348458-2348538:-1:exon

LOC129126526
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: LOC129126526
note: small nucleolar RNA SNORA71; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2350285..2350413)
location: region:2350285-2350413:-1
so has part: feature:2350285-2350413:-1:exon
subclass of: SO_0000578

129126526
type: Gene
SIO_000068: ncbigene

position:2350285:-1
position: 2350285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2350413:-1
position: 2350413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2350285-2350413:-1:exon

LOC129126526
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 39638
nc RNA class: snoRNA
gene: LOC129126526
product: small nucleolar RNA SNORA71
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00056
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_008535083.1
SIO_010081: LOC129126526
subclass of: SO_0000673
so part of: LOC129126526
location: complement(2350285..2350413)
location: region:2350285-2350413:-1
so has part: feature:2350285-2350413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2350285-2350413:-1:exon

CPEB1
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: CPEB1
note: cytoplasmic polyadenylation element binding protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2351740..2375261)
location: region:2351740-2375261:-1
so has part: feature:2351740-2375261:-1:exon
subclass of: SO_0000010

129126388
type: Gene
SIO_000068: ncbigene

position:2351740:-1
position: 2351740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2375261:-1
position: 2375261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2351740-2375261:-1:exon

CPEB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 39638
gene: CPEB1
product: cytoplasmic polyadenylation element binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_054642293.1
SIO_010081: CPEB1
subclass of: SO_0000673
so part of: CPEB1
location: complement(join(2351740..2353235,2353931..2354011,2354223..2354317,2355764..2355962,2356948..2357084,2357900..2357989,2358103..2358216,2358461..2358710,2360157..2360371,2374724..2374912,2375177..2375261))
location: region:2351740-2375261:-1
so has part: feature:2375177-2375261:-1:exon
so has part: feature:2374724-2374912:-1:exon
so has part: feature:2360157-2360371:-1:exon
so has part: feature:2358461-2358710:-1:exon
so has part: feature:2358103-2358216:-1:exon
so has part: feature:2357900-2357989:-1:exon
so has part: feature:2356948-2357084:-1:exon
so has part: feature:2355764-2355962:-1:exon
so has part: feature:2354223-2354317:-1:exon
so has part: feature:2353931-2354011:-1:exon
so has part: feature:2351740-2353235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2375177-2375261:-1:exon

position:2375177:-1
position: 2375177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2374724-2374912:-1:exon

position:2374724:-1
position: 2374724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2374912:-1
position: 2374912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2360157-2360371:-1:exon

position:2360157:-1
position: 2360157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2360371:-1
position: 2360371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2358461-2358710:-1:exon

position:2358461:-1
position: 2358461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2358710:-1
position: 2358710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2358103-2358216:-1:exon

position:2358103:-1
position: 2358103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2358216:-1
position: 2358216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2357900-2357989:-1:exon

position:2357900:-1
position: 2357900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2357989:-1
position: 2357989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2356948-2357084:-1:exon

position:2356948:-1
position: 2356948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2357084:-1
position: 2357084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2355764-2355962:-1:exon

position:2355764:-1
position: 2355764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2355962:-1
position: 2355962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2354223-2354317:-1:exon

position:2354223:-1
position: 2354223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2354317:-1
position: 2354317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2353931-2354011:-1:exon