Agelaius phoeniceus mitochondrion, complete genome.
type: Entry
definition: Agelaius phoeniceus mitochondrion, complete genome.
sequence version: NC_018801.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_018801.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Agelaius phoeniceus (red-winged blackbird)
organism: Agelaius phoeniceus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Icteridae; Agelaius.
reference: 1
references: 23000817
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to JX516062.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16775
topology: circular
so has quality: SO_0000988
location: 1..16775
location: region:1-16775:1
RO_0002162: 39638

NC_018801
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Empirical evaluation of partitioning schemes for phylogenetic analyses of mitogenomic data: An avian case study
author: Powell, A.F.
author: Barker, F.K.
author: Lanyon, S.M.
journal: Mol. Phylogenet. Evol.
volume: 66
issue: 1
pages: 69-79
year: 2013
pubmed: 23000817

23000817
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (11-OCT-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Powell, A.F.L.A.
author: Barker, F.K.
author: Lanyon, S.M.
journal: Submitted (22-AUG-2012) Dept. Ecology, Evolution, and Behavior, Univerity of Minnesota, 1987 Upper Buford Circle, St. Paul, MN 55108, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16775:1
position: 16775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16775:1:source
so part of: sequence
organism: Agelaius phoeniceus
organelle: mitochondrion
mol type: genomic DNA
specimen voucher: BB-96 Tordoff
country: USA: Minnesota

39638
type: Taxonomy
SIO_000068: taxonomy

D221_mgt01
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt01
so part of: sequence
location: 1..68
location: region:1-68:1
so has part: feature:1-68:1:exon
subclass of: SO_0000663

79562782
type: Gene
SIO_000068: ncbigene

position:68:1
position: 68
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-68:1:exon

D221_mgt01
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt01
product: tRNA-Phe
SIO_010081: D221_mgt01
subclass of: SO_0000673
so part of: D221_mgt01
location: 1..68
location: region:1-68:1
so has part: feature:1-68:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-68:1:exon

D221_mgr02
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgr02
so part of: sequence
location: 69..1042
location: region:69-1042:1
so has part: feature:69-1042:1:exon
subclass of: SO_0000573

79562783
type: Gene
SIO_000068: ncbigene

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042:1
position: 1042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69-1042:1:exon

D221_mgr02
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 39638
locus tag: D221_mgr02
product: s-rRNA
note: 12S ribosomal RNA
SIO_010081: D221_mgr02
subclass of: SO_0000673
so part of: D221_mgr02
location: 69..1042
location: region:69-1042:1
so has part: feature:69-1042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69-1042:1:exon

D221_mgt02
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt02
so part of: sequence
location: 1043..1112
location: region:1043-1112:1
so has part: feature:1043-1112:1:exon
subclass of: SO_0000663

79562784
type: Gene
SIO_000068: ncbigene

position:1043:1
position: 1043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112:1
position: 1112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043-1112:1:exon

D221_mgt02
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt02
product: tRNA-Val
SIO_010081: D221_mgt02
subclass of: SO_0000673
so part of: D221_mgt02
location: 1043..1112
location: region:1043-1112:1
so has part: feature:1043-1112:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1043-1112:1:exon

D221_mgr01
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgr01
so part of: sequence
location: 1113..2710
location: region:1113-2710:1
so has part: feature:1113-2710:1:exon
subclass of: SO_0000573

79562785
type: Gene
SIO_000068: ncbigene

position:1113:1
position: 1113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2710:1
position: 2710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113-2710:1:exon

D221_mgr01
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 39638
locus tag: D221_mgr01
product: l-rRNA
note: 16S ribosomal RNA
SIO_010081: D221_mgr01
subclass of: SO_0000673
so part of: D221_mgr01
location: 1113..2710
location: region:1113-2710:1
so has part: feature:1113-2710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1113-2710:1:exon

D221_mgt03
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt03
so part of: sequence
location: 2711..2785
location: region:2711-2785:1
so has part: feature:2711-2785:1:exon
subclass of: SO_0000663

79562786
type: Gene
SIO_000068: ncbigene

position:2711:1
position: 2711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2785:1
position: 2785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2711-2785:1:exon

D221_mgt03
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt03
product: tRNA-Leu
codon recognized: UUR
SIO_010081: D221_mgt03
subclass of: SO_0000673
so part of: D221_mgt03
location: 2711..2785
location: region:2711-2785:1
so has part: feature:2711-2785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2711-2785:1:exon

D221_mgp13
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: ND1
locus tag: D221_mgp13
so part of: sequence
location: 2800..3777
location: region:2800-3777:1
so has part: feature:2800-3777:1:exon
subclass of: SO_0000010

13825729
type: Gene
SIO_000068: ncbigene

position:2800:1
position: 2800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3777:1
position: 3777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2800-3777:1:exon

D221_mgp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ND1
locus tag: D221_mgp13
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MTNYPLLINLIMALSYILPILIAVAFLTLVERKILSYMQGRKGPNIVGPYGLLQPLADGVKLFIKEPIRPSTSSPVLFIATPILALLLALSIWTPLPLPFSLADLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVVLLSGNYTLNTLAITQEPLYLIFSCWPLAMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTTILFFNPSLFNPPQELFPVILATKVLLLSAGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPICYAGLPPYL
SIO_010081: D221_mgp13
subclass of: SO_0000673
so part of: D221_mgp13
location: 2800..3777
location: region:2800-3777:1
so has part: feature:2800-3777:1:exon

YP_006883824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2800-3777:1:exon

D221_mgt04
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt04
so part of: sequence
location: 3785..3856
location: region:3785-3856:1
so has part: feature:3785-3856:1:exon
subclass of: SO_0000663

79562777
type: Gene
SIO_000068: ncbigene

position:3785:1
position: 3785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3856:1
position: 3856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3785-3856:1:exon

D221_mgt04
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt04
product: tRNA-Ile
SIO_010081: D221_mgt04
subclass of: SO_0000673
so part of: D221_mgt04
location: 3785..3856
location: region:3785-3856:1
so has part: feature:3785-3856:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3785-3856:1:exon

D221_mgt05
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt05
so part of: sequence
location: complement(3862..3932)
location: region:3862-3932:-1
so has part: feature:3862-3932:-1:exon
subclass of: SO_0000663

79562787
type: Gene
SIO_000068: ncbigene

position:3862:-1
position: 3862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3932:-1
position: 3932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3862-3932:-1:exon

D221_mgt05
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt05
product: tRNA-Gln
SIO_010081: D221_mgt05
subclass of: SO_0000673
so part of: D221_mgt05
location: complement(3862..3932)
location: region:3862-3932:-1
so has part: feature:3862-3932:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3862-3932:-1:exon

D221_mgt06
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt06
so part of: sequence
location: 3932..4000
location: region:3932-4000:1
so has part: feature:3932-4000:1:exon
subclass of: SO_0000663

79562788
type: Gene
SIO_000068: ncbigene

position:3932:1
position: 3932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4000:1
position: 4000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3932-4000:1:exon

D221_mgt06
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt06
product: tRNA-Met
SIO_010081: D221_mgt06
subclass of: SO_0000673
so part of: D221_mgt06
location: 3932..4000
location: region:3932-4000:1
so has part: feature:3932-4000:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3932-4000:1:exon

D221_mgp12
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: ND2
locus tag: D221_mgp12
so part of: sequence
location: 4001..5040
location: region:4001-5040:1
so has part: feature:4001-5040:1:exon
subclass of: SO_0000010

13825722
type: Gene
SIO_000068: ncbigene

position:4001:1
position: 4001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5040:1
position: 5040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4001-5040:1:exon

D221_mgp12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ND2
locus tag: D221_mgp12
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5039..5040,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPQASLIFAASLLLGTTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFASMTNAWHTGQWDITQLTHPTSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLTTGLLLSTIMKLPPITLLYMTSPSLNPTLLTILAILSAALGGWMGLNQTQIRKILAFSSISHLGWMAIIIIYNPKLTLLNFYLYAMMTATVFLTLNTIKVLKLSTLMTAWTKIPSLNAMLLLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATLISLLSLLSLFFYLRLAYCTTITLPPHTTNHMKQWRTNKPTNITIAILTTVSIMLLPISPMILTIV
SIO_010081: D221_mgp12
subclass of: SO_0000673
so part of: D221_mgp12
location: 4001..5040
location: region:4001-5040:1
so has part: feature:4001-5040:1:exon

YP_006883825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4001-5040:1:exon

D221_mgt07
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt07
so part of: sequence
location: 5041..5110
location: region:5041-5110:1
so has part: feature:5041-5110:1:exon
subclass of: SO_0000663

79562776
type: Gene
SIO_000068: ncbigene

position:5041:1
position: 5041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5110:1
position: 5110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5041-5110:1:exon

D221_mgt07
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt07
product: tRNA-Trp
SIO_010081: D221_mgt07
subclass of: SO_0000673
so part of: D221_mgt07
location: 5041..5110
location: region:5041-5110:1
so has part: feature:5041-5110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5041-5110:1:exon

D221_mgt08
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt08
so part of: sequence
location: complement(5112..5180)
location: region:5112-5180:-1
so has part: feature:5112-5180:-1:exon
subclass of: SO_0000663

79562789
type: Gene
SIO_000068: ncbigene

position:5112:-1
position: 5112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5180:-1
position: 5180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5112-5180:-1:exon

D221_mgt08
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt08
product: tRNA-Ala
SIO_010081: D221_mgt08
subclass of: SO_0000673
so part of: D221_mgt08
location: complement(5112..5180)
location: region:5112-5180:-1
so has part: feature:5112-5180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5112-5180:-1:exon

D221_mgt09
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt09
so part of: sequence
location: complement(5190..5260)
location: region:5190-5260:-1
so has part: feature:5190-5260:-1:exon
subclass of: SO_0000663

79562790
type: Gene
SIO_000068: ncbigene

position:5190:-1
position: 5190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5260:-1
position: 5260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5190-5260:-1:exon

D221_mgt09
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt09
product: tRNA-Asn
SIO_010081: D221_mgt09
subclass of: SO_0000673
so part of: D221_mgt09
location: complement(5190..5260)
location: region:5190-5260:-1
so has part: feature:5190-5260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5190-5260:-1:exon

D221_mgt10
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt10
so part of: sequence
location: complement(5262..5328)
location: region:5262-5328:-1
so has part: feature:5262-5328:-1:exon
subclass of: SO_0000663

79562791
type: Gene
SIO_000068: ncbigene

position:5262:-1
position: 5262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5328:-1
position: 5328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5262-5328:-1:exon

D221_mgt10
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt10
product: tRNA-Cys
SIO_010081: D221_mgt10
subclass of: SO_0000673
so part of: D221_mgt10
location: complement(5262..5328)
location: region:5262-5328:-1
so has part: feature:5262-5328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5262-5328:-1:exon

D221_mgt11
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt11
so part of: sequence
location: complement(5328..5398)
location: region:5328-5398:-1
so has part: feature:5328-5398:-1:exon
subclass of: SO_0000663

79562792
type: Gene
SIO_000068: ncbigene

position:5398:-1
position: 5398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5328-5398:-1:exon

D221_mgt11
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt11
product: tRNA-Tyr
SIO_010081: D221_mgt11
subclass of: SO_0000673
so part of: D221_mgt11
location: complement(5328..5398)
location: region:5328-5398:-1
so has part: feature:5328-5398:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5328-5398:-1:exon

D221_mgp11
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: COX1
locus tag: D221_mgp11
so part of: sequence
location: 5400..6950
location: region:5400-6950:1
so has part: feature:5400-6950:1:exon
subclass of: SO_0000010

13825721
type: Gene
SIO_000068: ncbigene

position:5400:1
position: 5400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6950:1
position: 6950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5400-6950:1:exon

D221_mgp11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: COX1
locus tag: D221_mgp11
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MTFINRWLFSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELGQPGALLGDDQVYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMLSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGIKVFSWLATLHGGTIKWDPPMLWALGFIFLFTIGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLHSTWAKAHFGVMFVGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTISSVGSLISLTAVIMLVFIIWEAFASKRKVLQPELTSTNVEWIHGCPPPFHTFEEPAFVQVQE
SIO_010081: D221_mgp11
subclass of: SO_0000673
so part of: D221_mgp11
location: 5400..6950
location: region:5400-6950:1
so has part: feature:5400-6950:1:exon

YP_006883826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5400-6950:1:exon

D221_mgt12
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt12
so part of: sequence
location: complement(6942..7014)
location: region:6942-7014:-1
so has part: feature:6942-7014:-1:exon
subclass of: SO_0000663

79562773
type: Gene
SIO_000068: ncbigene

position:6942:-1
position: 6942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7014:-1
position: 7014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6942-7014:-1:exon

D221_mgt12
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt12
product: tRNA-Ser
codon recognized: UCN
SIO_010081: D221_mgt12
subclass of: SO_0000673
so part of: D221_mgt12
location: complement(6942..7014)
location: region:6942-7014:-1
so has part: feature:6942-7014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6942-7014:-1:exon

D221_mgt13
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt13
so part of: sequence
location: 7020..7088
location: region:7020-7088:1
so has part: feature:7020-7088:1:exon
subclass of: SO_0000663

79562793
type: Gene
SIO_000068: ncbigene

position:7020:1
position: 7020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7088:1
position: 7088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7020-7088:1:exon

D221_mgt13
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt13
product: tRNA-Asp
SIO_010081: D221_mgt13
subclass of: SO_0000673
so part of: D221_mgt13
location: 7020..7088
location: region:7020-7088:1
so has part: feature:7020-7088:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7020-7088:1:exon

D221_mgp10
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: COX2
locus tag: D221_mgp10
so part of: sequence
location: 7097..7780
location: region:7097-7780:1
so has part: feature:7097-7780:1:exon
subclass of: SO_0000010

13825718
type: Gene
SIO_000068: ncbigene

position:7097:1
position: 7097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7780:1
position: 7780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7097-7780:1:exon

D221_mgp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: COX2
locus tag: D221_mgp10
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit II
translation: MANHSQLNFQDAASPIMEELMGFHDHALMIALAICSLVLYLLTHTLTEKLSSSTVNAQVIELVWTILPALVLVTLALPSLRILYMMDEINEPDLTLKAIGHQWYWTYEYTDLKDLTFDSYMIPTADLPLGHFRLLEVDHRVVVPMSSTIRVIVTADDVLHSWAVPSLGVKTDAIPGRLNQTSFFASRPGVFYGQCSEICGANHSFMPIVVESTPLANFENWSSLMSS
SIO_010081: D221_mgp10
subclass of: SO_0000673
so part of: D221_mgp10
location: 7097..7780
location: region:7097-7780:1
so has part: feature:7097-7780:1:exon

YP_006883827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7097-7780:1:exon

D221_mgt14
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt14
so part of: sequence
location: 7782..7851
location: region:7782-7851:1
so has part: feature:7782-7851:1:exon
subclass of: SO_0000663

79562779
type: Gene
SIO_000068: ncbigene

position:7782:1
position: 7782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7851:1
position: 7851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7782-7851:1:exon

D221_mgt14
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt14
product: tRNA-Lys
SIO_010081: D221_mgt14
subclass of: SO_0000673
so part of: D221_mgt14
location: 7782..7851
location: region:7782-7851:1
so has part: feature:7782-7851:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7782-7851:1:exon

D221_mgp09
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: ATP8
locus tag: D221_mgp09
so part of: sequence
location: 7853..8020
location: region:7853-8020:1
so has part: feature:7853-8020:1:exon
subclass of: SO_0000010

13825724
type: Gene
SIO_000068: ncbigene

position:7853:1
position: 7853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8020:1
position: 8020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7853-8020:1:exon

D221_mgp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ATP8
locus tag: D221_mgp09
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPSPWFFIMLTSWLTFSLIIQPKLLSFVSMNPPSNKPPVAPTTTPWAWPWT
SIO_010081: D221_mgp09
subclass of: SO_0000673
so part of: D221_mgp09
location: 7853..8020
location: region:7853-8020:1
so has part: feature:7853-8020:1:exon

YP_006883828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7853-8020:1:exon

D221_mgp08
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: ATP6
locus tag: D221_mgp08
so part of: sequence
location: 8011..8694
location: region:8011-8694:1
so has part: feature:8011-8694:1:exon
subclass of: SO_0000010

13825728
type: Gene
SIO_000068: ncbigene

position:8011:1
position: 8011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8694:1
position: 8694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8011-8694:1:exon

D221_mgp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ATP6
locus tag: D221_mgp08
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MNLSFFDQFSSPSFLGIPLILISMTFPALLLPSLDNRWITNRLSTLQLWFINLVTKQLMMPLDKKGHKWALILTSLMIFLLLINLLGLLPYTFTPTTQLSMNLALAFPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTAGHLLIQLISTATTALFSTMPVVSLLTFVVLFLLTILEVAVAMIQAYVFVLLLSLYLQENI
SIO_010081: D221_mgp08
subclass of: SO_0000673
so part of: D221_mgp08
location: 8011..8694
location: region:8011-8694:1
so has part: feature:8011-8694:1:exon

YP_006883829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8011-8694:1:exon

D221_mgp07
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: COX3
locus tag: D221_mgp07
so part of: sequence
location: 8701..9484
location: region:8701-9484:1
so has part: feature:8701-9484:1:exon
subclass of: SO_0000010

13825725
type: Gene
SIO_000068: ncbigene

position:8701:1
position: 8701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9484:1
position: 9484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8701-9484:1:exon

D221_mgp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: COX3
locus tag: D221_mgp07
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9484,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHSYHMVDPSPWPILGAAAALLTTSGLTMWFHYNSPRLLILGLLSTILVMFQWWRDIVRESTFQGHHTPTVQKGLRYGMALFITSEAFFFLGFFWAFFHSSLAPTPELGGQWPPVGIKPLNPMEVPLLNTAILLASGVTVTWAHHSITEANRKQAIQALSLTVLLGFYFTALQAMEYYEAPFSIADGVYGSTFFVATGFHGLHVIIGSTFLLVCLLRLIKYHFTSNHHFGFEAAAWYWHFVDVVWLFLYISIYWWGS
SIO_010081: D221_mgp07
subclass of: SO_0000673
so part of: D221_mgp07
location: 8701..9484
location: region:8701-9484:1
so has part: feature:8701-9484:1:exon

YP_006883830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8701-9484:1:exon

D221_mgt15
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt15
so part of: sequence
location: 9485..9553
location: region:9485-9553:1
so has part: feature:9485-9553:1:exon
subclass of: SO_0000663

79562778
type: Gene
SIO_000068: ncbigene

position:9485:1
position: 9485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9553:1
position: 9553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9485-9553:1:exon

D221_mgt15
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt15
product: tRNA-Gly
SIO_010081: D221_mgt15
subclass of: SO_0000673
so part of: D221_mgt15
location: 9485..9553
location: region:9485-9553:1
so has part: feature:9485-9553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9485-9553:1:exon

D221_mgp06
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: ND3
locus tag: D221_mgp06
so part of: sequence
location: 9554..9904
location: region:9554-9904:1
so has part: feature:9554-9904:1:exon
subclass of: SO_0000010

13825723
type: Gene
SIO_000068: ncbigene

position:9554:1
position: 9554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9904:1
position: 9904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9554-9904:1:exon

D221_mgp06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ND3
locus tag: D221_mgp06
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNMVLFMLILSLTLSILLTMLNFWLAQMTPDPEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLQSPTTTLTWTATLILLLTLGLVYEWIQGGLEWAE
SIO_010081: D221_mgp06
subclass of: SO_0000673
so part of: D221_mgp06
location: 9554..9904
location: region:9554-9904:1
so has part: feature:9554-9904:1:exon

YP_006883831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9554-9904:1:exon

D221_mgt16
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt16
so part of: sequence
location: 9906..9975
location: region:9906-9975:1
so has part: feature:9906-9975:1:exon
subclass of: SO_0000663

79562781
type: Gene
SIO_000068: ncbigene

position:9906:1
position: 9906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9975:1
position: 9975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9906-9975:1:exon

D221_mgt16
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt16
product: tRNA-Arg
SIO_010081: D221_mgt16
subclass of: SO_0000673
so part of: D221_mgt16
location: 9906..9975
location: region:9906-9975:1
so has part: feature:9906-9975:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9906-9975:1:exon

D221_mgp05
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: ND4L
locus tag: D221_mgp05
so part of: sequence
location: 9977..10273
location: region:9977-10273:1
so has part: feature:9977-10273:1:exon
subclass of: SO_0000010

13825726
type: Gene
SIO_000068: ncbigene

position:9977:1
position: 9977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10273:1
position: 10273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9977-10273:1:exon

D221_mgp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ND4L
locus tag: D221_mgp05
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MSYLHLSFYSAFALSSLGLAFHRTHLISALLCLESMMLSMYVALAMWPIQTQSSVSTILPILMLTFSACEAGTGLALLVASTRTHGSDHLHNFNLLQC
SIO_010081: D221_mgp05
subclass of: SO_0000673
so part of: D221_mgp05
location: 9977..10273
location: region:9977-10273:1
so has part: feature:9977-10273:1:exon

YP_006883832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9977-10273:1:exon

D221_mgp04
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: ND4
locus tag: D221_mgp04
so part of: sequence
location: 10267..11644
location: region:10267-11644:1
so has part: feature:10267-11644:1:exon
subclass of: SO_0000010

13825727
type: Gene
SIO_000068: ncbigene

position:10267:1
position: 10267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11644:1
position: 11644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10267-11644:1:exon

D221_mgp04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ND4
locus tag: D221_mgp04
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11644,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKIIIPTATLLPLALLSPRKHLWTNVTLYSLLIATASLQWLTPTYYPNKSLTPWTSIDQISSPLLVLSCWLLPLMIMASQNHLEQEPINRKRVFASTLILAQLSILLAFSASELMLFYIAFEATLIPTLILITRWGSQPERLNAGIYLLFYTLASSLPLLIAILHLQNQIGSLYLPMLKLSHPTLNSSWSSLTASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVNPSSNNLHYPFITLALWGAVMTSAICLRQIDLKSLIAYSSVSHMGLVIAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVVALFNWSALTIILTGAAILLTASYTLYMLMMTQRGPIPSHITSIQNSSTREHLLMALHMIPMILLISKPELISGIPM
SIO_010081: D221_mgp04
subclass of: SO_0000673
so part of: D221_mgp04
location: 10267..11644
location: region:10267-11644:1
so has part: feature:10267-11644:1:exon

YP_006883833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10267-11644:1:exon

D221_mgt17
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt17
so part of: sequence
location: 11645..11714
location: region:11645-11714:1
so has part: feature:11645-11714:1:exon
subclass of: SO_0000663

79562774
type: Gene
SIO_000068: ncbigene

position:11645:1
position: 11645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11714:1
position: 11714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11645-11714:1:exon

D221_mgt17
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt17
product: tRNA-His
SIO_010081: D221_mgt17
subclass of: SO_0000673
so part of: D221_mgt17
location: 11645..11714
location: region:11645-11714:1
so has part: feature:11645-11714:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11645-11714:1:exon

D221_mgt18
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt18
so part of: sequence
location: 11715..11780
location: region:11715-11780:1
so has part: feature:11715-11780:1:exon
subclass of: SO_0000663

79562794
type: Gene
SIO_000068: ncbigene

position:11715:1
position: 11715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11780:1
position: 11780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11715-11780:1:exon

D221_mgt18
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt18
product: tRNA-Ser
codon recognized: AGY
SIO_010081: D221_mgt18
subclass of: SO_0000673
so part of: D221_mgt18
location: 11715..11780
location: region:11715-11780:1
so has part: feature:11715-11780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11715-11780:1:exon

D221_mgt19
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt19
so part of: sequence
location: 11780..11850
location: region:11780-11850:1
so has part: feature:11780-11850:1:exon
subclass of: SO_0000663

79562795
type: Gene
SIO_000068: ncbigene

position:11850:1
position: 11850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11780-11850:1:exon

D221_mgt19
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt19
product: tRNA-Leu
codon recognized: CUN
SIO_010081: D221_mgt19
subclass of: SO_0000673
so part of: D221_mgt19
location: 11780..11850
location: region:11780-11850:1
so has part: feature:11780-11850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11780-11850:1:exon

D221_mgp03
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: ND5
locus tag: D221_mgp03
so part of: sequence
location: 11851..13668
location: region:11851-13668:1
so has part: feature:11851-13668:1:exon
subclass of: SO_0000010

13825719
type: Gene
SIO_000068: ncbigene

position:11851:1
position: 11851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13668:1
position: 13668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11851-13668:1:exon

D221_mgp03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ND5
locus tag: D221_mgp03
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MDLSLVLNTLMLLTLATLSTPILLPLLSNNLKNTPDTITNTVKTSFLISLIPMTIFIYSGTENLTSLWEWKFIMTFKIPISLKMDFYTLTFFPIALFVSWSILQFATWYMASDPYITKFFTYLLFFLIAMLILIIANNLFVLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRIGDIGLILCMAWLASTTNTWEIQQLSTPSQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFNNNQTALTLCLCLGALSTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPELAFLHISTHAFFKAMLFLCSGSIIHNLNGEQDIRKMGGLQKMLPTTTTCLTIGNLALMGTPFLAGFYSKDQIIESLNTSYLNTWALVLTLLATSFTAVYTIRMTVLVQTGFVRIPPLTPMNENNPAVTSPITRLALGSILAGFLITSFIIPTKTPPMTMPLHIKMTALIVTALGIALALEISKMAQTLILTKQTPLSNFSTSLGYFNPLTHRLSMTNFLKGGQNIASHLIDLSWYKMLGPEGLASLQLTATKTATTLHSGLIKAYLGSFALSILIILTSTL
SIO_010081: D221_mgp03
subclass of: SO_0000673
so part of: D221_mgp03
location: 11851..13668
location: region:11851-13668:1
so has part: feature:11851-13668:1:exon

YP_006883834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11851-13668:1:exon

D221_mgp02
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: CYTB
locus tag: D221_mgp02
so part of: sequence
location: 13677..14819
location: region:13677-14819:1
so has part: feature:13677-14819:1:exon
subclass of: SO_0000010

13825717
type: Gene
SIO_000068: ncbigene

position:13677:1
position: 13677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14819:1
position: 14819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13677-14819:1:exon

D221_mgp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: CYTB
locus tag: D221_mgp02
codon start: 1
transl table: 2
product: cytochrome b
translation: MALNLRKNHQILKIINDALIDLPAPSNISTWWNFGSLLGVCLITQIVTGLLLAMHYTADTNLAFASVAHMCRDVQFGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNPLGIPSDCDKIPFHPYYTIKDILGFVLMLSLLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILVLFLTPLLHTSKLRSMTFRPLSQILFWALVANVLILTWVGSQPVEHPFIIIGQLASLSYFTIILILFPLAAALENKLLKL
SIO_010081: D221_mgp02
subclass of: SO_0000673
so part of: D221_mgp02
location: 13677..14819
location: region:13677-14819:1
so has part: feature:13677-14819:1:exon

YP_006883835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13677-14819:1:exon

D221_mgt20
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt20
so part of: sequence
location: 14823..14891
location: region:14823-14891:1
so has part: feature:14823-14891:1:exon
subclass of: SO_0000663

79562775
type: Gene
SIO_000068: ncbigene

position:14823:1
position: 14823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14891:1
position: 14891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14823-14891:1:exon

D221_mgt20
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt20
product: tRNA-Thr
SIO_010081: D221_mgt20
subclass of: SO_0000673
so part of: D221_mgt20
location: 14823..14891
location: region:14823-14891:1
so has part: feature:14823-14891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14823-14891:1:exon

D221_mgt21
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt21
so part of: sequence
location: complement(14899..14968)
location: region:14899-14968:-1
so has part: feature:14899-14968:-1:exon
subclass of: SO_0000663

79562796
type: Gene
SIO_000068: ncbigene

position:14899:-1
position: 14899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14968:-1
position: 14968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14899-14968:-1:exon

D221_mgt21
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt21
product: tRNA-Pro
SIO_010081: D221_mgt21
subclass of: SO_0000673
so part of: D221_mgt21
location: complement(14899..14968)
location: region:14899-14968:-1
so has part: feature:14899-14968:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14899-14968:-1:exon

D221_mgp01
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
gene: ND6
locus tag: D221_mgp01
so part of: sequence
location: complement(14978..15496)
location: region:14978-15496:-1
so has part: feature:14978-15496:-1:exon
subclass of: SO_0000010

13825720
type: Gene
SIO_000068: ncbigene

position:14978:-1
position: 14978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15496:-1
position: 15496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14978-15496:-1:exon

D221_mgp01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 39638
gene: ND6
locus tag: D221_mgp01
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MMEFVLFLGVCFVLGGLAVASNPSPYYGVLGLVVAAVAGCGWLVSLGVSFVSLVLVMVYLGGMLVVFVYSVSLAADPYPEAWGSWGVVGYGFGMGLVVVVGLVMGGVLGLLAEEGTVNSGGLLSVRSDFSGVAVLYSEGVGLLLIGGWGLLLTLLVVLELVRGLSRGAIRAV
SIO_010081: D221_mgp01
subclass of: SO_0000673
so part of: D221_mgp01
location: complement(14978..15496)
location: region:14978-15496:-1
so has part: feature:14978-15496:-1:exon

YP_006883836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14978-15496:-1:exon

D221_mgt22
type: Gene
subclass of: SO_0000704
RO_0002162: 39638
locus tag: D221_mgt22
so part of: sequence
location: complement(15498..15568)
location: region:15498-15568:-1
so has part: feature:15498-15568:-1:exon
subclass of: SO_0000663

79562780
type: Gene
SIO_000068: ncbigene

position:15498:-1
position: 15498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15568:-1
position: 15568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15498-15568:-1:exon

D221_mgt22
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 39638
locus tag: D221_mgt22
product: tRNA-Glu
SIO_010081: D221_mgt22
subclass of: SO_0000673
so part of: D221_mgt22
location: complement(15498..15568)
location: region:15498-15568:-1
so has part: feature:15498-15568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15498-15568:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 39638
note: control region
so part of: sequence
location: 15569..16775
location: region:15569-16775:1
so has part: feature:15569-16775:1:region

position:15569:1
position: 15569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15569-16775:1:region