Rothia terrae strain KJZ-14 plasmid p2, complete sequence.
type: Entry
definition: Rothia terrae strain KJZ-14 plasmid p2, complete sequence.
sequence version: NZ_CP062961.1
sequence date: 2022-11-16
sequence: sequence
division: CON
label: NZ_CP062961.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN16132433
keyword: RefSeq
source: Rothia terrae
organism: Rothia terrae
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Micrococcaceae; Rothia.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP062961.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.8\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 381.7x\nSequencing Technology :: Illumina; Oxford Nanopore\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/16/2022 03:45:03\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,440\nCDSs (total) :: 2,375\nGenes (coding) :: 2,330\nCDSs (with protein) :: 2,330\nGenes (RNA) :: 65\nrRNAs :: 4, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 3, 3 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 3\nPseudo Genes (total) :: 45\nCDSs (without protein) :: 45\nPseudo Genes (ambiguous residues) :: 0 of 45\nPseudo Genes (frameshifted) :: 18 of 45\nPseudo Genes (incomplete) :: 26 of 45\nPseudo Genes (internal stop) :: 7 of 45\nPseudo Genes (multiple problems) :: 6 of 45\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 53798
topology: circular
so has quality: SO_0000988
location: 1..53798
location: region:1-53798:1
RO_0002162: 396015

NZ_CP062961
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN16132433
type: BioSample
SIO_000068: biosample

1
title: Investigation of environmental microbes
author: Ou, Y.
author: Kang, Q.
journal: Unpublished

2
title: Direct Submission
author: Ou, Y.
author: Kang, Q.
journal: Submitted (29-SEP-2020) School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, 800 Dongchuan RD., Shanghai 200240, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53798:1
position: 53798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-53798:1:source
so part of: sequence
organism: Rothia terrae
mol type: genomic DNA
strain: KJZ-14
isolation source: dirt
plasmid: p2
country: China: Minhang
collection date: 2019-12-20

396015
type: Taxonomy
SIO_000068: taxonomy

IDM49_RS11690
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11690
old locus tag: IDM49_11710
so part of: sequence
location: complement(join(53700..53798,1..1224))
location: region:1-53798:-1
so has part: feature:1-1224:-1:exon
so has part: feature:53700-53798:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53798:-1
position: 53798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1224:-1:exon

position:1224:-1
position: 1224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53700-53798:-1:exon

position:53700:-1
position: 53700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IDM49_RS11690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11690
old locus tag: IDM49_11710
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HipA family toxin
translation: MKKLCVVLYDQVVAELTQDSSGAKKLTYICDAPPPAQLSIALPYRHSPYPKKPTEAFIEGLIPEGEAVRQSLADEYNLSSWKNPFAILEKIGLECAGAVQFVAPEELENLANNPGDLISVTEEQLERRLQRLGASSGNSWVLHRERWSLAGAQSKFALRLHHGQWYEATGAQPTTHIFKPGIHDLKDQALNEHLCLKTLGRLGLPVAHTNYQRFGGSGAIVVKRYDRITTDAGVFRLHQEDMCQATSTLPERKYESSRGPSALKIIELIRQVCPPEDVETFVQALIANYLLGAPDAHAKNYSLLHLPDGQIRFAPLYDIASGFPYTSLLSGGSADISQSSTHGIPGKDDGLEKAAMAIGGERRFGKVTSKHWTKFAQDAGLNEDRLRATVQYMAENLPEVLRQVCIEEAEAIGESDLIKRMRPSVEHLCETTLTMLDRDY
SIO_010081: IDM49_RS11690
subclass of: SO_0000673
so part of: IDM49_RS11690
location: complement(join(53700..53798,1..1224))
location: region:1-53798:-1
so has part: feature:1-1224:-1:exon
so has part: feature:53700-53798:-1:exon

WP_193836705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53700-53798:-1:exon

IDM49_RS11695
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11695
old locus tag: IDM49_11715
so part of: sequence
location: complement(1246..1890)
location: region:1246-1890:-1
so has part: feature:1246-1890:-1:exon
subclass of: SO_0000010

position:1246:-1
position: 1246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1890:-1
position: 1890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1246-1890:-1:exon

IDM49_RS11695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11695
old locus tag: IDM49_11715
inference: COORDINATES: protein motif:HMM:NF024949.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSDQPRNIRSSRDLGAFIYDARTQRHLTQEALANKANVSRSWLIGLEQGKRPRAEMDKILSLLDALDISLSLQMLQNHETVSKNQTPPDNAAKEISEHKASSPDAQNTTSDTTSAPWESLIGGTFKNAITSHLDTSQHLETYLSGQAAQPFKNANQILGNVAGANMPNIAKMIGANTPSIEKAIRANIPNFGQASGISQALNYKERENKTSDSE
SIO_010081: IDM49_RS11695
subclass of: SO_0000673
so part of: IDM49_RS11695
location: complement(1246..1890)
location: region:1246-1890:-1
so has part: feature:1246-1890:-1:exon

WP_193836703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1246-1890:-1:exon

IDM49_RS11700
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11700
old locus tag: IDM49_11720
so part of: sequence
location: 2197..3150
location: region:2197-3150:1
so has part: feature:2197-3150:1:exon
subclass of: SO_0000010

position:2197:1
position: 2197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3150:1
position: 3150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2197-3150:1:exon

IDM49_RS11700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11700
old locus tag: IDM49_11720
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MSSELDVMPSDASGLMSVDSSLPNFVKHRDLIVSWALSYTSENTQQAYLNDLKIFCTFLDEAQVDLLQVRRTHLDVFSRVHEQYTNSNASVARRLAAISAFYRFLLLDEVIEKSPAEYIRRPTIDPDFTATEALTQREALRLLDAATEHSLRAQTLVDLLLSTGLRISEALSIRESDISEGKLLITRKGGKKSAVYLPEHTLRNLRELTQTTGLEVETQGKTGTSPLVFITRTGKPWQRSNVDGLLRKLAVKAGIDKTVSAHVLRHTHATLALEMGVPLHHLQDSLGHKDPRTTRRYDHARARLENSSARVVGSLFE
SIO_010081: IDM49_RS11700
subclass of: SO_0000673
so part of: IDM49_RS11700
location: 2197..3150
location: region:2197-3150:1
so has part: feature:2197-3150:1:exon

WP_193836782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2197-3150:1:exon

IDM49_RS11705
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11705
old locus tag: IDM49_11725
so part of: sequence
location: 3237..4235
location: region:3237-4235:1
so has part: feature:3237-4235:1:exon
subclass of: SO_0000010

position:3237:1
position: 3237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4235:1
position: 4235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3237-4235:1:exon

IDM49_RS11705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11705
old locus tag: IDM49_11725
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGYNALPPKFIKEITQLEEGQFIVSAVRYFKSSEEVLALPVFTQLPEPYTWGEELTVLPQWSTTRWCKWNQEGQIVTRKDIPKVPKSLYWEASNFGRPDTHTVSITKDVWQKEIVHGRSIELTIKATSTGEDQIRVTVEANYPFEKEISPTDRNLLMAASLVQDSISATRATPLPRSSNLTREEWEKSLEITWDFFAINELDNQQKIFDYLSEIAQNNTSHQLAHQVMQERVEMIQDTAPGQIITGRSGATQYIGYKYKENLVALENFFYGNALYVFRENWQELSKKSRATLLSDYVGDFDRLVHTGKWKDKFIRILIANGHNPDGDDTAED
SIO_010081: IDM49_RS11705
subclass of: SO_0000673
so part of: IDM49_RS11705
location: 3237..4235
location: region:3237-4235:1
so has part: feature:3237-4235:1:exon

WP_193836783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3237-4235:1:exon

IDM49_RS11710
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11710
old locus tag: IDM49_11730
so part of: sequence
location: complement(4307..4657)
location: region:4307-4657:-1
so has part: feature:4307-4657:-1:exon
subclass of: SO_0000010

position:4307:-1
position: 4307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4657:-1
position: 4657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4307-4657:-1:exon

IDM49_RS11710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11710
old locus tag: IDM49_11730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004005751.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lsr2 family protein
translation: MAQKVKIVLEDDLFGGSAEETVRFGLDGKRYEMDLSAENATKLREALRPFANKARRFQTEKRSTPKQRVTSQPDGETPKIRAWAQENGYTISARGRVHQHIKDAYYVAQKASSREE
SIO_010081: IDM49_RS11710
subclass of: SO_0000673
so part of: IDM49_RS11710
location: complement(4307..4657)
location: region:4307-4657:-1
so has part: feature:4307-4657:-1:exon

WP_193836799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4307-4657:-1:exon

IDM49_RS11715
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11715
old locus tag: IDM49_11735
so part of: sequence
location: complement(4766..5230)
location: region:4766-5230:-1
so has part: feature:4766-5230:-1:exon
subclass of: SO_0000010

position:4766:-1
position: 4766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5230:-1
position: 5230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4766-5230:-1:exon

IDM49_RS11715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11715
old locus tag: IDM49_11735
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIEQLMSFLPSAFGALSVLCAGLFENRRAKEIQERIRKNSELLEKFQPENPIYQKLEPKILRDIERLEEEDSKQRDWSALVIAVIFFAITAPLAREAYILWAQEHVVFSATLWVMAITAGIFSLYAFVGWVIPRKPEDFITRNKKEKGNKDSS
SIO_010081: IDM49_RS11715
subclass of: SO_0000673
so part of: IDM49_RS11715
location: complement(4766..5230)
location: region:4766-5230:-1
so has part: feature:4766-5230:-1:exon

WP_193836784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4766-5230:-1:exon

IDM49_RS11720
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11720
old locus tag: IDM49_11740
so part of: sequence
location: 5497..6303
location: region:5497-6303:1
so has part: feature:5497-6303:1:exon
subclass of: SO_0000010

position:5497:1
position: 5497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6303:1
position: 6303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5497-6303:1:exon

IDM49_RS11720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11720
old locus tag: IDM49_11740
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: Abi family protein
translation: MFSFEKYIASERFAPYQRAHTSVQQQRELYLWNIELAQELSKTIGHAEIFLREAIDQQLRTWNLAQPVVPGLIHDQTGRPLHRQDPRRRTSGGSEEWIKHPSRKIANLILSKRGNRFVSEYDSAFTRAQKDLNARVLSHPRHGADVTHDDVLAHITLGTWKRLLPDGRLNTTARLNPDQVRTKNSQLDLWDQALRHAFPYEPNPYVVSYRLTQMHVARNRVAHHESLLNMQVQQVHRATVRLVGTVNPQLGSWLANESQVIECWKRRP
SIO_010081: IDM49_RS11720
subclass of: SO_0000673
so part of: IDM49_RS11720
location: 5497..6303
location: region:5497-6303:1
so has part: feature:5497-6303:1:exon

WP_193836785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5497-6303:1:exon

IDM49_RS11725
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11725
old locus tag: IDM49_11745
so part of: sequence
location: complement(6846..7622)
location: region:6846-7622:-1
so has part: feature:6846-7622:-1:exon
subclass of: SO_0000010

position:6846:-1
position: 6846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7622:-1
position: 7622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6846-7622:-1:exon

IDM49_RS11725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11725
old locus tag: IDM49_11745
inference: COORDINATES: protein motif:HMM:NF024752.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase family protein
translation: MLHQRTTGLTPQQFTTLLTALTSHITWAKPGGRPPALTLAQALKVTLFYHRHNLTEELLAEIFNTSQPTISRTLNTVEKALEKALRPLEQSIENSLKIPGSLVIDGTLIPTWNWRSLGKTNFSGKHKRAGFNHQVICTLGGKLLAITDPVPGARHDAYAFKHHGLERYLDESTLADKGYIGLGLATPVRRSKARRMPADVKVVNRFINSRRSVVERVIAQVKTWRVLHTGFRRPLSVYGRVFAVVRGLVFYAAGRTFE
SIO_010081: IDM49_RS11725
subclass of: SO_0000673
so part of: IDM49_RS11725
location: complement(6846..7622)
location: region:6846-7622:-1
so has part: feature:6846-7622:-1:exon

WP_193836745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6846-7622:-1:exon

IDM49_RS11730
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11730
old locus tag: IDM49_11750
so part of: sequence
location: complement(7698..8201)
location: region:7698-8201:-1
so has part: feature:7698-8201:-1:exon
subclass of: SO_0000010

position:7698:-1
position: 7698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8201:-1
position: 8201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7698-8201:-1:exon

IDM49_RS11730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11730
old locus tag: IDM49_11750
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNVRMYTVMVASPSDIPQARQTLKEAIHAWNSANTFHRNIILLPLLWEHDSIPLLGDGDGQDVINQQLVDRADIIFALFGSRLGQPTSKALSGTVAEMQKAHEAGRPIHPFFYKGDIPQDADLEQLQKLRDFKKNLGGLHADFVNNQELTTMEAYSKVGTHPHPTN
SIO_010081: IDM49_RS11730
subclass of: SO_0000673
so part of: IDM49_RS11730
location: complement(7698..8201)
location: region:7698-8201:-1
so has part: feature:7698-8201:-1:exon

WP_193836786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7698-8201:-1:exon

IDM49_RS11735
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11735
old locus tag: IDM49_11755
so part of: sequence
location: complement(8338..9114)
location: region:8338-9114:-1
so has part: feature:8338-9114:-1:exon
subclass of: SO_0000010

position:8338:-1
position: 8338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9114:-1
position: 9114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8338-9114:-1:exon

IDM49_RS11735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11735
old locus tag: IDM49_11755
inference: COORDINATES: protein motif:HMM:NF024752.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase family protein
translation: MLHQRTTGLTPQQFTTLLTALTSHITWAKPGGRPPALTLAQGLKVTLFYHRHNLTEELLAEIFNTSQPTISRTINTVEKALEKALRPLEQSIENSLKIPGSLVIDGTLIPTWNWRSLGKTNFSGKHKRAGFNHQVICTLGGKLLAITDPVPGARHDAYAFKHHGLERYLDESTLADKGYIGLGLATPVRRSKARRMPADVKVVNRFINSRRSVVERVIAQVKTWRVLHTGFRRPLSVYGRVFAVVRGLVFYAAGRTFE
SIO_010081: IDM49_RS11735
subclass of: SO_0000673
so part of: IDM49_RS11735
location: complement(8338..9114)
location: region:8338-9114:-1
so has part: feature:8338-9114:-1:exon

WP_193836787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8338-9114:-1:exon

IDM49_RS11740
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11740
old locus tag: IDM49_11760
so part of: sequence
location: complement(9343..9561)
location: region:9343-9561:-1
so has part: feature:9343-9561:-1:exon
subclass of: SO_0000010

position:9343:-1
position: 9343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9561:-1
position: 9561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9343-9561:-1:exon

IDM49_RS11740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11740
old locus tag: IDM49_11760
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPQTLSNNPLIEHADFSVARYAVGGVMQSDLSAAEWMKTLEPFEFAHEARDVVESIDERFDGSVVGLWVGRG
SIO_010081: IDM49_RS11740
subclass of: SO_0000673
so part of: IDM49_RS11740
location: complement(9343..9561)
location: region:9343-9561:-1
so has part: feature:9343-9561:-1:exon

WP_193836788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9343-9561:-1:exon

IDM49_RS11745
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11745
old locus tag: IDM49_11765
so part of: sequence
location: complement(9569..9850)
location: region:9569-9850:-1
so has part: feature:9569-9850:-1:exon
subclass of: SO_0000010

position:9569:-1
position: 9569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9850:-1
position: 9850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9569-9850:-1:exon

IDM49_RS11745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11745
old locus tag: IDM49_11765
inference: COORDINATES: protein motif:HMM:NF013015.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTNQTLIFHFDINSCYASCEKILDPSLRDNPVVVLSNNDRCIIALDSEAKALGFKLGDPWFQVEELATARGIVARSSNYELYSDISERFMLV
SIO_010081: IDM49_RS11745
subclass of: SO_0000673
so part of: IDM49_RS11745
location: complement(9569..9850)
location: region:9569-9850:-1
so has part: feature:9569-9850:-1:exon

WP_193836789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9569-9850:-1:exon

IDM49_RS11750
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
gene: umuD
locus tag: IDM49_RS11750
old locus tag: IDM49_11770
so part of: sequence
location: complement(9840..10271)
location: region:9840-10271:-1
so has part: feature:9840-10271:-1:exon
subclass of: SO_0000010

position:9840:-1
position: 9840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10271:-1
position: 10271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9840-10271:-1:exon

IDM49_RS11750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
gene: umuD
locus tag: IDM49_RS11750
old locus tag: IDM49_11770
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010298367.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translesion error-prone DNA polymerase V autoproteolytic subunit
translation: MKAALTHQLTADIPAQYPSSETTVPAGFPSPAQDYTATSIDLNHILIKDKTATYILRVSGHSMIDAGISDGGEIIVDRSITPTHGNIVVAALAGEFTVKRFEIDHHGKGWLVPANPDYSPIPSEEEADFLIFGVVTRCIHHVY
SIO_010081: IDM49_RS11750
subclass of: SO_0000673
so part of: IDM49_RS11750
location: complement(9840..10271)
location: region:9840-10271:-1
so has part: feature:9840-10271:-1:exon

WP_228008269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9840-10271:-1:exon

IDM49_RS11755
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11755
old locus tag: IDM49_11775
so part of: sequence
location: complement(10802..12211)
location: region:10802-12211:-1
so has part: feature:10802-12211:-1:exon
subclass of: SO_0000010

position:10802:-1
position: 10802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12211:-1
position: 12211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10802-12211:-1:exon

IDM49_RS11755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11755
old locus tag: IDM49_11775
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPLVQYTTNKFTIPLKHPKGLQDITEKDFEEAANRIFTVVLPGRIKQLSHSTSINTGAAVRKVQLVPKDPEEVKWRVATIKAGLQESVIFHPTKNVSHWEKRQSFPGYDGSDKGSISYNLGTVQAYIMAQRILGVNTLVNLDSLLTVMNGQQPRDSRPDFIGYKRNISPGRTVSVQSRHIRIVIEAKGRSPKVKPTSILTNHEGTDAALRQLGKRKDSKKNYSWQSILTAPIKSPNPQAIGIASLAYFDSNDRWCSYLEDPDYDLKPGKLSCSDEDFEAYVDLTAAIQAHLYFKQNGSRVASSTRVSSNETLQNIWRDKVTNTALAISSRLQKFLESIDSLPVSSDQLEEFKRIQEEEKTGSSSTLNVVKQETGQQVLPEQWASDRYRNAALLETLWQEELWLRIDKLFKRNIFDANRIKPGLDMIVPLEKSKIELKIDTQAEGNSSLAVEEEASDTHEKSSFHIMTLA
SIO_010081: IDM49_RS11755
subclass of: SO_0000673
so part of: IDM49_RS11755
location: complement(10802..12211)
location: region:10802-12211:-1
so has part: feature:10802-12211:-1:exon

WP_193836790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10802-12211:-1:exon

IDM49_RS11760
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11760
old locus tag: IDM49_11780
so part of: sequence
location: complement(12440..12679)
location: region:12440-12679:-1
so has part: feature:12440-12679:-1:exon
subclass of: SO_0000010

position:12440:-1
position: 12440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12679:-1
position: 12679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12440-12679:-1:exon

IDM49_RS11760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11760
old locus tag: IDM49_11780
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSNMGERLKAAQAKKNQKQNAVSVENTFKSSKDVSKKETKKFTFNLDADLYQKLRREAFEKETDMTSLMNSYLRQALQ
SIO_010081: IDM49_RS11760
subclass of: SO_0000673
so part of: IDM49_RS11760
location: complement(12440..12679)
location: region:12440-12679:-1
so has part: feature:12440-12679:-1:exon

WP_193836791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12440-12679:-1:exon

IDM49_RS11765
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11765
old locus tag: IDM49_11785
so part of: sequence
location: complement(12748..13353)
location: region:12748-13353:-1
so has part: feature:12748-13353:-1:exon
subclass of: SO_0000010

position:12748:-1
position: 12748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13353:-1
position: 13353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12748-13353:-1:exon

IDM49_RS11765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11765
old locus tag: IDM49_11785
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MRITIATTKGGAAKTTTAMLLAEAAGRAGYSSRVIDLDPQGSATEWSEVAEQAGDPLTRFDVTFAIKPVLKKTLEASMQDWVFIDTPPGDSATIDEAIKLADFVIVPTPVAPEDFNRAVKTLNAIDKPAALLLCHWNKQNTKMYDIVRSQIQESDLIAFDAEVPNKQQLQNFWYANTSKGDLGGYQDVFTELSQTLKALNS
SIO_010081: IDM49_RS11765
subclass of: SO_0000673
so part of: IDM49_RS11765
location: complement(12748..13353)
location: region:12748-13353:-1
so has part: feature:12748-13353:-1:exon

WP_193836792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12748-13353:-1:exon

IDM49_RS11770
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11770
old locus tag: IDM49_11790
so part of: sequence
location: complement(13457..14491)
location: region:13457-14491:-1
so has part: feature:13457-14491:-1:exon
subclass of: SO_0000010

position:13457:-1
position: 13457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14491:-1
position: 14491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13457-14491:-1:exon

IDM49_RS11770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11770
old locus tag: IDM49_11790
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MAKATAIPAGYTCTALADHWLQTVEQNVDLSCRRADFTQNFLNICKTLARSLDRSTGIVRITWETLSKLTGTSRATIARVLRTLKAHHLLGVIASGRSAKKTPRGQQQQNLAPVYALLTPTPPTPDKGGEDDYFYDENGNLFITDTPSPLRDEKISYNKAKATGAFSIFFKQQYALYAATHRKNLELKRQHLQGVYPTKKAHQQALTHLARVLQHHCYDLRAMSARAIIEATQPFFEAGWSVRDVLYALEYSPTNHPYNTKGATGMRSVKKWLHLRLNAWLSQGEILPSRTAVEEQQHREQKAQHVIASQSRKKVCGPSVEVKRQIKVALLGEKKARYLFPELF
SIO_010081: IDM49_RS11770
subclass of: SO_0000673
so part of: IDM49_RS11770
location: complement(13457..14491)
location: region:13457-14491:-1
so has part: feature:13457-14491:-1:exon

WP_193836793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13457-14491:-1:exon

IDM49_RS11775
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11775
old locus tag: IDM49_11795
so part of: sequence
location: complement(14814..15014)
location: region:14814-15014:-1
so has part: feature:14814-15014:-1:exon
subclass of: SO_0000010

position:14814:-1
position: 14814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15014:-1
position: 15014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14814-15014:-1:exon

IDM49_RS11775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11775
old locus tag: IDM49_11795
inference: COORDINATES: protein motif:HMM:NF015807.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Arc family DNA-binding protein
translation: MQTRSKRLANNQELRFLTVRMPEEVKESLRDAAKERNVSVANLLTAIVAKDLEIEGYELPEPNKDF
SIO_010081: IDM49_RS11775
subclass of: SO_0000673
so part of: IDM49_RS11775
location: complement(14814..15014)
location: region:14814-15014:-1
so has part: feature:14814-15014:-1:exon

WP_193836794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14814-15014:-1:exon

IDM49_RS11780
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11780
old locus tag: IDM49_11800
so part of: sequence
location: complement(15662..16060)
location: region:15662-16060:-1
so has part: feature:15662-16060:-1:exon
subclass of: SO_0000010

position:15662:-1
position: 15662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16060:-1
position: 16060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15662-16060:-1:exon

IDM49_RS11780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11780
old locus tag: IDM49_11800
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDEVGRNQEDKGPWTVKEVLKVIVSLVILAGVLFMLSTPLISKYNQTHYTMRSCTVTEATARETRTVTTSTKLSIYTSDCGTLVYEISKPGAELERMAEHINEFQGKRLGFGFGDIQLQSNLSTVFKVESIE
SIO_010081: IDM49_RS11780
subclass of: SO_0000673
so part of: IDM49_RS11780
location: complement(15662..16060)
location: region:15662-16060:-1
so has part: feature:15662-16060:-1:exon

WP_193836795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15662-16060:-1:exon

IDM49_RS11785
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11785
old locus tag: IDM49_11805
so part of: sequence
location: complement(16092..16376)
location: region:16092-16376:-1
so has part: feature:16092-16376:-1:exon
subclass of: SO_0000010

position:16092:-1
position: 16092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16376:-1
position: 16376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16092-16376:-1:exon

IDM49_RS11785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11785
old locus tag: IDM49_11805
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERTFDGVNGASTYALTPQEKDVTLTDVAIYGLENSAKGAVNSHPKVSQLKAVEGPSIIGASSLAPDVQLGAGEVGLVGVDTAVAHVEGSNEDK
SIO_010081: IDM49_RS11785
subclass of: SO_0000673
so part of: IDM49_RS11785
location: complement(16092..16376)
location: region:16092-16376:-1
so has part: feature:16092-16376:-1:exon

WP_193836796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16092-16376:-1:exon

IDM49_RS11790
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11790
old locus tag: IDM49_11810
so part of: sequence
location: complement(16662..17093)
location: region:16662-17093:-1
so has part: feature:16662-17093:-1:exon
subclass of: SO_0000010

position:16662:-1
position: 16662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17093:-1
position: 17093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16662-17093:-1:exon

IDM49_RS11790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11790
old locus tag: IDM49_11810
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMTERVNQNREGSAAEGSGTPSPRARKIFGRLVMCFWLIIGGYFVIDHFFYRTIDCTVTSAEASSSGGGLRVSGSQQRIYVETQECGTVTFVEMQNEGFDTAQDLADELNRHQGEKLRFHISYFQFKNHEARAVELEGYPIND
SIO_010081: IDM49_RS11790
subclass of: SO_0000673
so part of: IDM49_RS11790
location: complement(16662..17093)
location: region:16662-17093:-1
so has part: feature:16662-17093:-1:exon

WP_193836797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16662-17093:-1:exon

IDM49_RS11795
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11795
old locus tag: IDM49_11815
so part of: sequence
location: complement(17111..22990)
location: region:17111-22990:-1
so has part: feature:17111-22990:-1:exon
subclass of: SO_0000010

position:17111:-1
position: 17111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22990:-1
position: 22990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17111-22990:-1:exon

IDM49_RS11795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11795
old locus tag: IDM49_11815
inference: COORDINATES: protein motif:HMM:NF040127.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6531 domain-containing protein
translation: MGAPEIPFNPDTARKVKETFNKAAGKLKDQVGGRNGAADTILKDFKGPYATVYTTNKDTVSGDSNELAGAMEQVAYIMDRAIEAYEEAKADAEKSDWENFKEDVKEFFGAGEQEEVPPAPALPSASTPSTSSKETPTGQAGQESVVSGVPSNMREGTQTLKGFDDELTTFPGDMKSALEAYASECTWAPITVGNIPDQLDKWLKDNSKEQEWLNKIADEFERISGNAQQVSTVPTSAMEAAVGNANSHLRADLKVDTPTIQGSEAAAGYIGDPVNAATGNFIEPETDLAFTGASSALSITRMYNALNRTSGVFGLGWSSSLDMRLILTDENATWIKEDGQHLIFPRRGDGWERADAHALWLTKEASESLPATFNTPTEHLLVVRDNQGSWWAFDTAGYWVGHGESTGNIIMVERGERQEVTRIQHARGRFINVEYADSKVAYVQSNDGTRVEYIYDEVGKLTGARTAAGIRHYNYNEQDLISAVTAADGTVEVENFYDALGRVRSQRYPHGVVRKYSYLSGGVTLVTNEDGSHANSWISDAKGRLVGMIDANQNRQSMAYDTFSNRVSVTERDGSMTVRAYNKRGLLTREVTPEGADATYEWDAHDRLKTLITTSGAVISYEYADETGAERNPSTLVDALGGHTQMNWENGLLTSMVGPTGVSVTCAYDAYGEMTAITNALGETTRFERDGTGRIQRIITPLGLTTTFTYDAAGLLVARQEADGALWRFGYGTGGRLNTVTDPAGAVTAYEYNIAGEIARVIDPLGRTTTHDFDAMGNLASITDPAGSTWSLVYDQLMQNTALIDPLGHRWSREYDINGELASVTDPTGVRTTAKTERRSGIHQITDAFGTHTTTFDAYGRPTKATGADGSEEVYTHDAAGNIVEILDAEGHLTTITRDARGEITAITTPEGRTTTFTYDECGRPLTMTEPTGVVTTLEYDADSRVITRSTTAGVREEITYDKASRIISQRTNTGTARYGYDVCGRLTFAVDQQFGTRRFSYDQAGQLVCATNGLGGKTRYTYTPNGQVATLTAPNGAVTSYEYDAAGQLVTTVDPLGRRTTGTYDAAGRLLSTTNPDGDELAYTYDAGGLLATTRFNQQLVSRVERDVRARTTCVLDYTQPGTSLADENTGTPVVHTLATDRLGQLIERTTTRKDAAGATITDQQVRITYTPDGARSHMVVNGQATDYTYDEGTGLLTTLMRTHSADNAVGEKGQSQSDTSVFESLTYHYDQDAHLTHITDHTGAVLRAFNTVPTIVEAGTTGGAQEADASYVTDGGWATIEHRHVDGQQQPVTTYYNAEGLVIGVDDTVDGLRLLTYDDAHQLTAVMTDHGTHRFTYDTAGFLIGEETTTGVTREYTYDDAGQLVRLQDSHTGVSEYVYDGLGRRVQHTDPTGAVSTYAYSSVGLLAEITGEDRDAVYLWNDALGEVAAVATGGTGTDAGSPTTMCTLVWDPVAFTPTVLGVNNTPVSLGALASVDALGGRGVDPFGLSPVVTGFTAGAGSDANARGLLTTGIGSIPGVPGLGLTRAGSVQVAGLEILGVRAYDATTRGFITPDPLVSPVGAGWAGNVYAFAGNDPVSQVDPWGLSPMTATQFREYRQDTSKRAGERLYQRAEQFLNDHAGLIAAATIVAGIAIMATGPLGWVGMAAVGGLLSFGGSVATQKLFGGKVNLKKSLIDGAVGFVGGGLGKLASMGTSALASSRLASTFTNSTAITKIGSALSSTRSGVTGAFGVARSWVAPAASRVASFASPLTSRISSAAAPMVSKAQPAVQVAGQWGRNIAGQYTSAGVVNEAAEGAVSGAVNNAGGYWFNAENGYTPTVSGALRSAGAGFGIGMLTPAVGGGTVQHWGVSGLKKIGVDRGVDFVSGGTNYLISPSNDNKNKDLKGFTQEGFKNALTGGATSSGKWGEQTSSSAIRQAVPEHLQGVEVSRRDFITGDLPAPPSVSGGDGQGYDQRHQ
SIO_010081: IDM49_RS11795
subclass of: SO_0000673
so part of: IDM49_RS11795
location: complement(17111..22990)
location: region:17111-22990:-1
so has part: feature:17111-22990:-1:exon

WP_193836798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17111-22990:-1:exon

IDM49_RS11800
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11800
old locus tag: IDM49_11820
so part of: sequence
location: complement(23136..23417)
location: region:23136-23417:-1
so has part: feature:23136-23417:-1:exon
subclass of: SO_0000010

position:23136:-1
position: 23136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23417:-1
position: 23417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23136-23417:-1:exon

IDM49_RS11800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11800
old locus tag: IDM49_11820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017888088.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyrophosphorylase
translation: MARVLSSDEAKSAITRIQEIINGGLADQIQALDGQGQLLSDPNNWDGPLAEQFRGSTWPETKSALEKAKTELDELQQQLQKIAQDIFTAGGGA
SIO_010081: IDM49_RS11800
subclass of: SO_0000673
so part of: IDM49_RS11800
location: complement(23136..23417)
location: region:23136-23417:-1
so has part: feature:23136-23417:-1:exon

WP_193836733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23136-23417:-1:exon

IDM49_RS11805
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11805
old locus tag: IDM49_11825
so part of: sequence
location: complement(23701..25650)
location: region:23701-25650:-1
so has part: feature:23701-25650:-1:exon
subclass of: SO_0000010

position:23701:-1
position: 23701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25650:-1
position: 25650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23701-25650:-1:exon

IDM49_RS11805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11805
old locus tag: IDM49_11825
EC number: 2.7.11.1
inference: COORDINATES: protein motif:HMM:NF012298.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine/threonine-protein kinase
translation: MGEVAAGAPLGASYKLVKLIGKGASGQVWRLEHSKKSEPLIAKILHQHLAEDHSVVERFVRERSVLMSLQHEHIVTVHDLVVEGSTLALVMDYYSGGSLRDQLEQRGTFKPALALQLVATVLETLAYAHGQNVIHRDIKPDNILLAAASQDLDSQQIRITDFGIASIIHADHANTTGIVGTPYYLPPELIQHGTSGAAGDVYSTGIMLYELLAGRTPFAGDGTDFTIAYRHISAQVPVLDVPEPIMQVLMALLDKNPSQRPHPLDAASQLRVLAQRFESLPALQPMPSPRGFAEAKRPETVIRGSGNSTASLAPEPAEDAAPPILGASARATIIKPQHVERAAQDSEHVESPVVQEVKKSRSKAIWLSVLGVLLLAGAGWGIYWAVSAHSKPGEPFSAMGSQETPLPTGLSVRREATYNPSSSTIELKIIYSAQKAPLSGDLLEVLPATEDGDSCPNASWENADAQRNQPTVTDMNVQCGWNLQNVEIMPNQELEITGKVSAQVADQQELEKWLDAVSEQTQDAITSKDYKSASYPIQRLTDIAVKVPERTVSQTVVPVTLLPVWPSGEDALNPLYSSETFGKPSSMLQAIAGDKDPVRFSDGCAGHLMVDASGQKITALSVADQCSVNAQVGNFTDLQSNNFAISTRR
SIO_010081: IDM49_RS11805
subclass of: SO_0000673
so part of: IDM49_RS11805
location: complement(23701..25650)
location: region:23701-25650:-1
so has part: feature:23701-25650:-1:exon

WP_193836732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23701-25650:-1:exon

IDM49_RS11810
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11810
old locus tag: IDM49_11830
so part of: sequence
location: 26006..29014
location: region:26006-29014:1
so has part: feature:26006-29014:1:exon
subclass of: SO_0000010

position:26006:1
position: 26006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29014:1
position: 29014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26006-29014:1:exon

IDM49_RS11810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11810
old locus tag: IDM49_11830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVSFDSASGASSSKEQDYALRDTVNDLPIRITTRYTTDEKSGNNLDDLEGYTGDVSIDITVENLTVSPEQLTYDVAGAQKEKTALVGAPLSVAASTTFQGVKPQKILSDATVGNGNTNGIISTNDEGDAVLQWGKILAGPSSSASTTFTVNLSAEDLKVPEFTVAVHPGLSNDLSASGAVSSSFSKTQDSELELMQQTVEIVAEANQALADAGATISDIRDNLNSTSESLKSSTVQELQQSSDKLTGQLTDLQEKLGGLKANLGESTQGSQSELIGQMQQTVESLEKFLGREGEQIPAPVMDAGTCKVDVTQPANGTSVYSNMVQLSNILGEYSKANVDCRDRVVDVMNSILGPENPTPETCKDSTSAACSVFNSQVVMTATLLESAANTNKMVEQLRPGALSQVSTDYVAAYEALQDLQKQVDALPENTETVQPVPAPTTPSESPSPSDTPSPEENPSPTPTETSTKEPSKNPEDYKDILASLDTIDGQMKTSSENLQKLEDLLKSINNTAQKALAEITKDAPGNGSMLTQNQELADQLCTLTDGGTEQAGKLSQEEVNRLRGYLTDTPCGETPTPVTPSPTPTTPNPGSPEPVKPESTPTPDVSPTPTASQSSSTPEPNDNSGTPIVIDPAADITIDTPQGYQDPMDTRLKNQADLWTSILNSTDTVSEESQTAQEIQAVRESLTGVTDETAKIRDALDREIVGGNVNPKNEDPTPQNPQPQQPVNPQPVEPQPEVSDPQTPHPVIPTPNQDVKAIKNSVPNLNGRFEDLSTSLDDLATQQQEINDALQQLMKDAPAENADEIADILNQQARNVSRQRTGGEQAITDLFSQQVTTLSGSSDSISNQADALVKDQSEKLNAAAQQQVEEADARTQSALERIQESHDQATTDAAGASTVLTSELEKIMLDVGDTSVTGSGLLGSLQNNAGNAENADYQLSLATENAQKYSTIREEDMGAIRLKQAQYDASLKKLGNLPPFHLEAPSGATVKTIYTFTIGGEK
SIO_010081: IDM49_RS11810
subclass of: SO_0000673
so part of: IDM49_RS11810
location: 26006..29014
location: region:26006-29014:1
so has part: feature:26006-29014:1:exon

WP_193836731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26006-29014:1:exon

IDM49_RS11815
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11815
old locus tag: IDM49_11835
so part of: sequence
location: 29017..30279
location: region:29017-30279:1
so has part: feature:29017-30279:1:exon
subclass of: SO_0000010

position:29017:1
position: 29017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30279:1
position: 30279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29017-30279:1:exon

IDM49_RS11815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11815
old locus tag: IDM49_11835
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEKLTNIGIPVALLLLITVIAIAGILRVKADEKDEAVAVTVPVELNVDGNVKGSSYGLIVTIGNENAQGSQWNQAASGAKVALERFNRSGADLHLATEDDRGTDEGARQAVENLAAQKVSGIVISSSGDHVQAAVQAAKERNIPVILPYENSIDDARSLQPSTESLNDVLSAEHPGGKGIIRIDQEGFAGIDVPAERTLSVNGFTDINTFSQSLVKDTAEAGSDTVVFVDASAYQEAKLTRALQEAGLKTQIVLGPQATSPAFNDVFMKDNQSTVINAQSIGFNAGDSVALQSDGQGRSMSAYLQMVKILSESKDAMSVMGDQKFSDVAASADSRSHDALVALVRATEHAESIAPQDVKSSLNDLKLSSADGITSADMDFAQHHVIQDAPLLLSANAGDVEMRVADANAPSHLVWFAQA
SIO_010081: IDM49_RS11815
subclass of: SO_0000673
so part of: IDM49_RS11815
location: 29017..30279
location: region:29017-30279:1
so has part: feature:29017-30279:1:exon

WP_193836730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29017-30279:1:exon

IDM49_RS11820
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11820
old locus tag: IDM49_11840
so part of: sequence
location: 30357..34652
location: region:30357-34652:1
so has part: feature:30357-34652:1:exon
subclass of: SO_0000010

position:30357:1
position: 30357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34652:1
position: 34652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30357-34652:1:exon

IDM49_RS11820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11820
old locus tag: IDM49_11840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004809532.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsK/SpoIIIE domain-containing protein
translation: MRVLISIDSLNRTVEVDSWRGNTTLCELIATVGGPKLDAEDSLYIDTHVVKAGDFIEKLPLLEGSRISRFPLNGTPTLPGWVVSISGGLQSGEIKPVTRKRPMIFGRSDQADVVLSTESASWEHFTATLTDEGLQVTDSGSTNGTYVQGTKVESDTPVVISEPTEVQAGGATLLFQPMLHEFTAPAPGSLHNLTPNRTAPFNRPPRPSLPSLPGAVTPPKRENVKENSKFNIAMVLAPLVMAGAMVMLMGSFRYAAFALLSPVVMIATWFEGKHRYKKELAAEEERFAKALEDFKKDLEKAATIERSRRQELTPDNATVMRRSSLPSTELWQRRFESADFLLARIGTGNRDWKPELDKRSSTTLEDEVQKTYDAFELRGAPLMANLNRGGVVGIVGQREGSLALARSLVVQLATHVGPADLTFGIFCDEGKEHDWGWASWLPHTRQAGSVDGGRWMASGRHRSTEMLRSLHQGIDHFITPAVMLVLDSEVLTEGRDAPARELLGYGRETPTRSLGSSSQKADHTVSGIVIASSEEQLPASCTSIVRVREDAEADIFEPESRTLIKDAVLAGVDLEQAEQTAMRLAHFDDPELVVPGAALPRLVRAPELFDLAPAKSEKVQKLWRERTGISAPIGVGDDGEVVLDIVRDGPHGLVGGTTGSGKSEFLRTFVAGLAARNSPEDLNFILIDFKGGAAFKACERLPHTIGTISNLDEQLADRALRALDAEMHRRQVLFAQAGEGVDNIKDYMATNPAEPMPRILLVIDEFAMLAKDFPEVLQSLVNVAAVGRTLGVHMILATQRPAGVVNDDILANTNLRVALRVQSKEDSSNVIGVPDASAIERTQMGRAYVKLGQEDISAVQTALVTGQTPIEGATQLELRESSIFGVPQKSLVEKPKVISEENDLDLLIDAVCSAHDELGISAPRQVWPEALGERVALDGFSAPIVTDLGKIQQPVGSFNGNQLNFALADQPQYQRQIPAGWDVSRGNLMLVGIPGSGTTTALASLALVAAAQRSPAELDLLVLDVGAGGLKDLQMLPHTVAYVGHGGRAKEQRARFLRFLQTELERRRASAGDEKPMLILIDGLASLRDEFDDYDGQILLNMLYRAYAEGASLGMHFAVATPRSKAIPMAMDEVTTQKWLFKLADTYDYSGQGVKGKNIPASVAGRCVSVEQLLQMHVATPDIRFEEAVVKVQQLWPDAVTKADVIGQLPDAVTVSELGAHADLSGEPWRIPVGLGEQDLSPVFLETYHGEHILIAGTARSGKSTLLLAIRNMVEQAHTGEAGQTPEVWAICSRRSPLASEDFDHLAVGDDEVPALVAQLRLASGPVVLLIDDADSFADNDKSIAGLVDSPVPGLCIVAAGRSDELRTLYSHWTKTLRKAKCGVLLQPNVDLDGDLLGARIPRKAPVELSVGRGYAVSNGNVHLVQAVSAS
SIO_010081: IDM49_RS11820
subclass of: SO_0000673
so part of: IDM49_RS11820
location: 30357..34652
location: region:30357-34652:1
so has part: feature:30357-34652:1:exon

WP_193836729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30357-34652:1:exon

IDM49_RS12450
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS12450
pseudo: true
so part of: sequence
location: <34667..>35764
location: region:34667-35764:1
so has part: feature:34667-35764:1:exon
subclass of: SO_0000010

position:34667:1
position: 34667
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:35764:1
position: 35764
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34667-35764:1:exon

IDM49_RS12450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS12450
inference: COORDINATES: protein motif:HMM:TIGR01643.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: IDM49_RS12450
subclass of: SO_0000673
so part of: IDM49_RS12450
location: <34667..>35764
location: region:34667-35764:1
so has part: feature:34667-35764:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34667-35764:1:exon

IDM49_RS12455
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS12455
so part of: sequence
location: 35918..37471
location: region:35918-37471:1
so has part: feature:35918-37471:1:exon
subclass of: SO_0000010

position:35918:1
position: 35918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37471:1
position: 37471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35918-37471:1:exon

IDM49_RS12455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS12455
inference: COORDINATES: protein motif:HMM:TIGR03696.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RHS repeat-associated core domain-containing protein
translation: MCTLTWDPVAFTPTVLGVNNTLVSLGALASLDAVGGRGVDPFGLSPVVAGFTTGSGVGSDVSSDAQGLLTTGSIPGVPGLGLTRAGSVQVAGLEILGVRAYDATTRGFMSPDPLVSPVGAGWAGNVYAFAGNDPVGQVDPWGLSPMTAAEFREYRQDTSARAIERMGKGLADFADRNAGWIALGVAAVGVAALAVSGPIGWGILTGMALSGGIEIGSQLLSGEPLDWKKIAKSASIGGIAGGVGAGVAGLATKVGSKIFTSIASKYSTQAGAVNQQMSQVFRNVATNPTTKNAVPKIVTGLKRTQQSLMGNAQRYSSLASKVGSAGAREGVAAYVEAGTDTTLTYITDGHHVTGKGLVAAWGVPAVSNAVLPKPVSKYVDNRLTQFGWEATGGVSQKIRSEVAQGVGNFTNGVVSYSGAPMTYSPQYESFRDSTYDGVGWDFNKAWQEGLKETFKGGASSSHPVESLKSVSFEAKPVSSGVDYAGMARDSAMLSAGASGVEVSAASIYHHEKGTTNE
SIO_010081: IDM49_RS12455
subclass of: SO_0000673
so part of: IDM49_RS12455
location: 35918..37471
location: region:35918-37471:1
so has part: feature:35918-37471:1:exon

WP_265578818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35918-37471:1:exon

IDM49_RS11830
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11830
old locus tag: IDM49_11850
so part of: sequence
location: 37464..37886
location: region:37464-37886:1
so has part: feature:37464-37886:1:exon
subclass of: SO_0000010

position:37464:1
position: 37464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37886:1
position: 37886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37464-37886:1:exon

IDM49_RS11830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11830
old locus tag: IDM49_11850
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKEHSSVQGKKKKLTLIDKLVHLPLTLILIGTVVYGISHVVLSGTINRAFNHPQQCTITAAVAQRSGSKSYSSSSNIYIQSPDCSDLRFIGKNEGHTDQEIVDRIRGFKGQKVTVYVGVWQTPFSATDVAGIEGLDLSH
SIO_010081: IDM49_RS11830
subclass of: SO_0000673
so part of: IDM49_RS11830
location: 37464..37886
location: region:37464-37886:1
so has part: feature:37464-37886:1:exon

WP_193836727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37464-37886:1:exon

IDM49_RS11835
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11835
old locus tag: IDM49_11855
so part of: sequence
location: 38172..38459
location: region:38172-38459:1
so has part: feature:38172-38459:1:exon
subclass of: SO_0000010

position:38172:1
position: 38172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38459:1
position: 38459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38172-38459:1:exon

IDM49_RS11835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11835
old locus tag: IDM49_11855
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERTFDGGGNGASTYALTPQPEQHSWDQALIKGLENSAKGAVNSHPKVSQLKAVEGPSIIGASSLAPDVQLGAGEVGLVGVDTAVAHVEGSNEDK
SIO_010081: IDM49_RS11835
subclass of: SO_0000673
so part of: IDM49_RS11835
location: 38172..38459
location: region:38172-38459:1
so has part: feature:38172-38459:1:exon

WP_193836726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38172-38459:1:exon

IDM49_RS11840
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11840
old locus tag: IDM49_11860
so part of: sequence
location: 38502..38885
location: region:38502-38885:1
so has part: feature:38502-38885:1:exon
subclass of: SO_0000010

position:38502:1
position: 38502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38885:1
position: 38885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38502-38885:1:exon

IDM49_RS11840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11840
old locus tag: IDM49_11860
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNEQEKQPKTWGTYVARVLIVLFFAGVLFMLSTPLISKYNQTHYTMRSCTIDHANYYEQRTVATSKNLAIHTTDCGTLEYNARVSGEELQSLETKINDYRGQQLDFGFGKFQFWSGPKMVYTVGGIE
SIO_010081: IDM49_RS11840
subclass of: SO_0000673
so part of: IDM49_RS11840
location: 38502..38885
location: region:38502-38885:1
so has part: feature:38502-38885:1:exon

WP_193836725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38502-38885:1:exon

IDM49_RS11845
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11845
old locus tag: IDM49_11865
pseudo: true
so part of: sequence
location: <39407..39870
location: region:39407-39870:1
so has part: feature:39407-39870:1:exon
subclass of: SO_0000010

position:39407:1
position: 39407
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:39870:1
position: 39870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39407-39870:1:exon

IDM49_RS11845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11845
old locus tag: IDM49_11865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006770492.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: IDM49_RS11845
subclass of: SO_0000673
so part of: IDM49_RS11845
location: <39407..39870
location: region:39407-39870:1
so has part: feature:39407-39870:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39407-39870:1:exon

IDM49_RS12360
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS12360
pseudo: true
so part of: sequence
location: complement(<39950..40081)
location: region:39950-40081:-1
so has part: feature:39950-40081:-1:exon
subclass of: SO_0000010

position:39950:-1
position: 39950
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:40081:-1
position: 40081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39950-40081:-1:exon

IDM49_RS12360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS12360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011013652.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cytochrome c biogenesis protein CcdA
SIO_010081: IDM49_RS12360
subclass of: SO_0000673
so part of: IDM49_RS12360
location: complement(<39950..40081)
location: region:39950-40081:-1
so has part: feature:39950-40081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39950-40081:-1:exon

IDM49_RS11850
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11850
old locus tag: IDM49_11870
so part of: sequence
location: complement(40292..41812)
location: region:40292-41812:-1
so has part: feature:40292-41812:-1:exon
subclass of: SO_0000010

position:40292:-1
position: 40292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41812:-1
position: 41812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40292-41812:-1:exon

IDM49_RS11850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11850
old locus tag: IDM49_11870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014319625.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multicopper oxidase family protein
translation: MTNASSRRQFLLGGLVLAGTGALTACTSNPGPAASASGSSLRPTPTPTALGEPTVRRTLTTRPLSLDIGGIEAKTWGYVSDTGDAAIEATAGDVLQVDITNELPESTSIHWHGIALHNAADGVPGMTQDPIEPGESFSYVFEVPHGGTYFYHSHTGLQLDRGLHAPLIIRDPQDAEDQDVEWTIVLDDWVDGIQGTPDDELDKLTGMGSGDHNGGMEMGDHNGGMEMGDHNGGMEMGDHGTPDRVLGGDAGDVMYPHYLINGRIPRAHRTFEARPGDKARLRFINSGGDTIFKVALGGHRMTVTHTDGFPVQPWETESIYLSMGERVDVEVILGDGVFPLTALAVGKDDRAFAVIRTADGQAPRPDVDFPELSSTGLLLSSLKPADRALLPEGTPDREVSIDLGGQMMPYEWSILTDGQSSSATVQEGQRLRMVMRNRTMMPHPMHIHGHTWALPGSGGLRKDTVLLRGGETMIADLIAENPGEWAFHCHNAYHMETGMFSSLRYE
SIO_010081: IDM49_RS11850
subclass of: SO_0000673
so part of: IDM49_RS11850
location: complement(40292..41812)
location: region:40292-41812:-1
so has part: feature:40292-41812:-1:exon

WP_193836724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40292-41812:-1:exon

IDM49_RS11855
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11855
old locus tag: IDM49_11875
so part of: sequence
location: complement(41884..42459)
location: region:41884-42459:-1
so has part: feature:41884-42459:-1:exon
subclass of: SO_0000010

position:41884:-1
position: 41884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42459:-1
position: 42459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41884-42459:-1:exon

IDM49_RS11855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11855
old locus tag: IDM49_11875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006284600.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CueP family metal-binding protein
translation: MKRAAIAAAALALALTGCSAADPEPTADGTVSQDTFLTTHGLAAMDAVEIIDHLDRQKVTERPTDLIASVRANELLLSSDDQEVVVDLPDNQTYVSIAPYLTSTHDCFYHSLTTCLGELDNEDIQVTITDEATGEVLVDEATTTFDNGFIGFWLPDDTTGLIEVSYQGRTGTTEFSTTDDGATCVTDLRLT
SIO_010081: IDM49_RS11855
subclass of: SO_0000673
so part of: IDM49_RS11855
location: complement(41884..42459)
location: region:41884-42459:-1
so has part: feature:41884-42459:-1:exon

WP_193836723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41884-42459:-1:exon

IDM49_RS11860
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11860
old locus tag: IDM49_11880
so part of: sequence
location: 42768..43574
location: region:42768-43574:1
so has part: feature:42768-43574:1:exon
subclass of: SO_0000010

position:42768:1
position: 42768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43574:1
position: 43574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42768-43574:1:exon

IDM49_RS11860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11860
old locus tag: IDM49_11880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012732540.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MFEDLMKISPPGTERGWYSPLAGAILGSMADYTPTTATPPGRVLVVDDEQPLAQMVASYLIRAGFDTRQAHTGTQALDEARRFSPDVVVLDLGLPELDGLEVCRRIRTFSDCYILMLTARGSEDDKISGLTLGADDYITKPFSIRELVTRVHAVLRRPRTSTTPPQVTTPLIVGDLILDPVAHQVRVGETTVELTRTEFELLLALALRPGQVLTRHDLVTEVWDTTWVGDERIVDVHIGNLRRKLGTDTRGRGFIDTVRGVGYRVGQP
SIO_010081: IDM49_RS11860
subclass of: SO_0000673
so part of: IDM49_RS11860
location: 42768..43574
location: region:42768-43574:1
so has part: feature:42768-43574:1:exon

WP_193836721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42768-43574:1:exon

IDM49_RS11865
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11865
old locus tag: IDM49_11885
so part of: sequence
location: 43571..44698
location: region:43571-44698:1
so has part: feature:43571-44698:1:exon
subclass of: SO_0000010

position:43571:1
position: 43571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44698:1
position: 44698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43571-44698:1:exon

IDM49_RS11865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11865
old locus tag: IDM49_11885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006840783.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MNHGPGLTFRFLAAQVLVVVISLLVAAAVATMVGPTLFHDHMLMTGQEDPSLELFHAEQAYRDANLITLAVALPTALISALLASLWLSRRLRTPLQDLTRAATSLTAGNYRIRVPAGEAGPEVTTLAHAFNTMADRLEHTEQVRRQMLSDLAHEMGTPLSVLTVYLDGLQDGVVDWNNATHTIMADQLARLTRLMEDIDDVSRAQEHRIDLDLAEEGLGDLLHTAAAAAGEAYADKGVDLQVETITDTAQVLVDRQRFGQVMSNLLSNALRHTPAGGQVRISVHRQGASTALIHVADDGEGIPPGQLGHIFERFYRGDAARSRDNGGAGIGLTISKALIEAHGGTLTATSPGPGRGAVFTLRLPLSPPDSEEAAR
SIO_010081: IDM49_RS11865
subclass of: SO_0000673
so part of: IDM49_RS11865
location: 43571..44698
location: region:43571-44698:1
so has part: feature:43571-44698:1:exon

WP_193836719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43571-44698:1:exon

IDM49_RS11870
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11870
old locus tag: IDM49_11890
so part of: sequence
location: 44813..45139
location: region:44813-45139:1
so has part: feature:44813-45139:1:exon
subclass of: SO_0000010

position:44813:1
position: 44813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45139:1
position: 45139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44813-45139:1:exon

IDM49_RS11870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11870
old locus tag: IDM49_11890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010933983.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy-metal-associated domain-containing protein
translation: MITSPPRLLPMASHSCSCCGPASRTDTASIPAASDSSAGGSSPSYQVTGLSCGHCAKSVTQALQALPQVDDVQVDLAAGGVSTVTVTGVVPPEMVRRAIEETGYTVLS
SIO_010081: IDM49_RS11870
subclass of: SO_0000673
so part of: IDM49_RS11870
location: 44813..45139
location: region:44813-45139:1
so has part: feature:44813-45139:1:exon

WP_193836718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44813-45139:1:exon

IDM49_RS11875
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11875
old locus tag: IDM49_11895
so part of: sequence
location: 45191..47425
location: region:45191-47425:1
so has part: feature:45191-47425:1:exon
subclass of: SO_0000010

position:45191:1
position: 45191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47425:1
position: 47425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45191-47425:1:exon

IDM49_RS11875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11875
old locus tag: IDM49_11895
EC number: 3.6.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012732543.1
GO function: GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]; GO:0043682 - P-type divalent copper transporter activity [Evidence IEA]
GO process: GO:0006825 - copper ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper-translocating P-type ATPase
translation: MSTPHHSGDHHGDHPAPETDHPHHPDHASHEHHADADTHGQAMPHDHPHSALDEDHHVHGHGEHAGHSTAMFRDRFWWSLILSIPVVIFSPMVAHLLGYHLPAFPGSTWIPPVLGTIIFVYGGTPFLKGGWKELKSRQPGMMLLIAMAITVAFVASWVTTLGLGGFELDFWWELALLVTIMLLGHWLEMSALGAASSALDALAALLPDEAEKVIDGTTRTVAISELVVDDVVLVRAGARVPADGTILDGAAEFDEAMITGESRPVFRDTGDKVVAGTVATDNTVRIRVEATGGDTALAGIQRMVADAQESSSRAQALADRAAALLFWFALISALITAVVWTIIGNPDDAVVRTVTVLVIACPHALGLAIPLVIAISSERAAKSGVLIKDRMALERMRTIDVVLFDKTGTLTEGAHAVTGVAAAVGVTEGELLALAAAAEADSEHPVARAIVAAAAAHPEASRRQIRATGFSAASGRGVRATVDGAEILVGGPNMLREFNLTIPAELTDTTSAWTGRGAGVLHIVRDGQIIGAVAVEDKIRPESRAAVKALQDRGVKVAMITGDAQQVAHAVGQDLGIDEVFAEVLPQDKDTKVTQLQDRGLSVAMVGDGVNDAPALTRADVGIAIGAGTDVAMESAGVVLASDDPRAVLSMIELSQASYRKMIQNLIWASGYNILAVPLAAGMLASIGFVLSPAVGAILMSASTIVVALNAQLLRRIDLDPAHLAPTESKEEHATPTPASTAVH
SIO_010081: IDM49_RS11875
subclass of: SO_0000673
so part of: IDM49_RS11875
location: 45191..47425
location: region:45191-47425:1
so has part: feature:45191-47425:1:exon

WP_193836717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45191-47425:1:exon

IDM49_RS11880
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11880
old locus tag: IDM49_11900
so part of: sequence
location: 47474..48160
location: region:47474-48160:1
so has part: feature:47474-48160:1:exon
subclass of: SO_0000010

position:47474:1
position: 47474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48160:1
position: 48160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47474-48160:1:exon

IDM49_RS11880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11880
old locus tag: IDM49_11900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015650353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF305 domain-containing protein
translation: MKRTLVLSTLAVASTLALAACGETTESGNTDATTSATSTATTTPETTEATTATTEADGEISADHNDADIMFAQMMIPHHQQAVEMSEMLLAKEGIPAQVVEFAQGVIDAQGPEIDRMNAMLEAWGQQPVTDSGGMGTMDEMGGMDHGEMGGMSGMMSQEDMTALEEAQGTEAARLYLEQMTAHHEGAVDMARDEVADGQNPHAITLAEQVINDQEAEIAQMQQMLTDL
SIO_010081: IDM49_RS11880
subclass of: SO_0000673
so part of: IDM49_RS11880
location: 47474..48160
location: region:47474-48160:1
so has part: feature:47474-48160:1:exon

WP_193836715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47474-48160:1:exon

IDM49_RS12365
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS12365
pseudo: true
so part of: sequence
location: 48329..>48505
location: region:48329-48505:1
so has part: feature:48329-48505:1:exon
subclass of: SO_0000010

position:48329:1
position: 48329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48505:1
position: 48505
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48329-48505:1:exon

IDM49_RS12365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS12365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017834429.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF5911 domain-containing protein
SIO_010081: IDM49_RS12365
subclass of: SO_0000673
so part of: IDM49_RS12365
location: 48329..>48505
location: region:48329-48505:1
so has part: feature:48329-48505:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48329-48505:1:exon

IDM49_RS11885
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11885
old locus tag: IDM49_11905
pseudo: true
so part of: sequence
location: 48803..49389
location: region:48803-49389:1
so has part: feature:48803-49389:1:exon
subclass of: SO_0000010

position:48803:1
position: 48803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49389:1
position: 49389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48803-49389:1:exon

IDM49_RS11885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11885
old locus tag: IDM49_11905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011896729.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: IDM49_RS11885
subclass of: SO_0000673
so part of: IDM49_RS11885
location: 48803..49389
location: region:48803-49389:1
so has part: feature:48803-49389:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48803-49389:1:exon

IDM49_RS11890
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11890
old locus tag: IDM49_11910
so part of: sequence
location: 49505..49735
location: region:49505-49735:1
so has part: feature:49505-49735:1:exon
subclass of: SO_0000010

position:49505:1
position: 49505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49735:1
position: 49735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49505-49735:1:exon

IDM49_RS11890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11890
old locus tag: IDM49_11910
inference: COORDINATES: protein motif:HMM:NF012464.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MDKRTDVSLPLDISEQPEGVSGEKVGYARVSSKGQNLERQTELLRKEGVFSLFEDRMTGATRQRIRSSRDLETVKG
SIO_010081: IDM49_RS11890
subclass of: SO_0000673
so part of: IDM49_RS11890
location: 49505..49735
location: region:49505-49735:1
so has part: feature:49505-49735:1:exon

WP_193836713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49505-49735:1:exon

IDM49_RS11895
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11895
old locus tag: IDM49_11915
pseudo: true
so part of: sequence
location: 50393..>50641
location: region:50393-50641:1
so has part: feature:50393-50641:1:exon
subclass of: SO_0000010

position:50393:1
position: 50393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50641:1
position: 50641
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50393-50641:1:exon

IDM49_RS11895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11895
old locus tag: IDM49_11915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004985528.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: TIR domain-containing protein
SIO_010081: IDM49_RS11895
subclass of: SO_0000673
so part of: IDM49_RS11895
location: 50393..>50641
location: region:50393-50641:1
so has part: feature:50393-50641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50393-50641:1:exon

IDM49_RS11900
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11900
old locus tag: IDM49_11920
so part of: sequence
location: complement(50705..51301)
location: region:50705-51301:-1
so has part: feature:50705-51301:-1:exon
subclass of: SO_0000010

position:50705:-1
position: 50705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51301:-1
position: 51301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50705-51301:-1:exon

IDM49_RS11900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11900
old locus tag: IDM49_11920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003859025.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cadmium resistance transporter
translation: MVTGLLGAVGLFIATNIDDIIVLSLFFARGAGQAGTTLRILAGQYLGFAGILAATILVTLGADAFLPTEAIPYFGLIPLALGLWAAWQAWRGDDDDDDDAKVSGKNVSVLTVAGVTFANGGDNIGVYVPVFLNVDTATVIIYCVVFLILVAGLVLLAKFVATRPPIAEFLERWEHVLFPIVLIGLGIFILVSGGAFGL
SIO_010081: IDM49_RS11900
subclass of: SO_0000673
so part of: IDM49_RS11900
location: complement(50705..51301)
location: region:50705-51301:-1
so has part: feature:50705-51301:-1:exon

WP_168615718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50705-51301:-1:exon

IDM49_RS11905
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11905
old locus tag: IDM49_11925
so part of: sequence
location: complement(51302..51661)
location: region:51302-51661:-1
so has part: feature:51302-51661:-1:exon
subclass of: SO_0000010

position:51302:-1
position: 51302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51661:-1
position: 51661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51302-51661:-1:exon

IDM49_RS11905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11905
old locus tag: IDM49_11925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006839590.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MLTIASRLDVMNRLGRAMADPTRSRILLTLLGGPAYPAALARELELTRSNVSNHLTCLRDCGIVVAEPQGRKTRYEIVDAHLVQALNSLLDTTLAADENAPCIDSACDVPGCATGEGNR
SIO_010081: IDM49_RS11905
subclass of: SO_0000673
so part of: IDM49_RS11905
location: complement(51302..51661)
location: region:51302-51661:-1
so has part: feature:51302-51661:-1:exon

WP_023024707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51302-51661:-1:exon

IDM49_RS11910
type: Gene
subclass of: SO_0000704
RO_0002162: 396015
locus tag: IDM49_RS11910
old locus tag: IDM49_11930
so part of: sequence
location: 52288..53019
location: region:52288-53019:1
so has part: feature:52288-53019:1:exon
subclass of: SO_0000010

position:52288:1
position: 52288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53019:1
position: 53019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52288-53019:1:exon

IDM49_RS11910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396015
locus tag: IDM49_RS11910
old locus tag: IDM49_11930
inference: COORDINATES: protein motif:HMM:TIGR02391.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR02391 family protein
translation: MTQLNKVWAIMEIELFLEITAQVRPQTAPGVAYLGTVMRGPSTEASERAYVVEQILDRTMPSWRSEKPAADKDFRWLRKQASRAKVALEREEELTQNLGDNSPEMDTSNLHPWVWGSIQSLWEGGHYQQAVRDAAIQVNAEAQKKLGRRDVSETDLFNQAFSLEDPKVGKPRLRLMDDDGSPTYQSIHRGARALAEGLYSGIRNPAMHTSHENTDDEEQIALEQLTAFSLLARWVDQATIVRV
SIO_010081: IDM49_RS11910
subclass of: SO_0000673
so part of: IDM49_RS11910
location: 52288..53019
location: region:52288-53019:1
so has part: feature:52288-53019:1:exon

WP_193836709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52288-53019:1:exon