Rhizobium phaseoli strain R650 plasmid pRphaR650c, complete sequence.
type: Entry
definition: Rhizobium phaseoli strain R650 plasmid pRphaR650c, complete sequence.
sequence version: NZ_CP013535.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_CP013535.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN03998634
keyword: RefSeq
source: Rhizobium phaseoli
organism: Rhizobium phaseoli
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP013535.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SPAdes v. 3.5.0; Consed23\nGenome Coverage :: 180x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 00:05:01\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,453\nCDSs (total) :: 6,389\nGenes (coding) :: 6,200\nCDSs (with protein) :: 6,200\nGenes (RNA) :: 64\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 4\nPseudo Genes (total) :: 189\nCDSs (without protein) :: 189\nPseudo Genes (ambiguous residues) :: 0 of 189\nPseudo Genes (frameshifted) :: 115 of 189\nPseudo Genes (incomplete) :: 121 of 189\nPseudo Genes (internal stop) :: 32 of 189\nPseudo Genes (multiple problems) :: 62 of 189\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 435286
topology: circular
so has quality: SO_0000988
location: 1..435286
location: region:1-435286:1
RO_0002162: 396

NZ_CP013535
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN03998634
type: BioSample
SIO_000068: biosample

1
title: The limits of bacterial species coexistence and the symbiotic plasmid transference in sympatric Rhizobium populations
author: Perez-Carrascal, O.M.
author: VanInsberghe, D.
author: Juarez, S.
author: Polz, M.F.
author: Vinuesa, P.
author: Gonzalez, V.
journal: Unpublished

2
title: Direct Submission
author: Perez-Carrascal, O.M.
author: Bustos, P.
author: Santamaria, R.I.
author: Juarez, S.
author: Gonzalez, V.
journal: Submitted (24-NOV-2015) Programa de Genomica Evolutiva, Centro de Ciencias Genomicas - UNAM, Av. Universidad s/n, Col. Chamilpa, Cuernavaca, Morelos 62210, Mexico

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435286:1
position: 435286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-435286:1:source
so part of: sequence
organism: Rhizobium phaseoli
mol type: genomic DNA
strain: R650
isolation source: legume-root nodule
host: Phaseolus vulgaris
plasmid: pRphaR650c
country: Mexico: Tepoztlan, Morelos
altitude: 1700 m
collection date: 2013
collected by: Olga Perez Carrascal and Victor Gonzalez Z.
biovar: phaseoli

396
type: Taxonomy
SIO_000068: taxonomy

AMC88_RS33280
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33280
pseudo: true
so part of: sequence
location: complement(<462..>689)
location: region:462-689:-1
so has part: feature:462-689:-1:exon
subclass of: SO_0000010

45961729
type: Gene
SIO_000068: ncbigene

position:462:-1
position: 462
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:689:-1
position: 689
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462-689:-1:exon

AMC88_RS33280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611472.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
SIO_010081: AMC88_RS33280
subclass of: SO_0000673
so part of: AMC88_RS33280
location: complement(<462..>689)
location: region:462-689:-1
so has part: feature:462-689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:462-689:-1:exon

AMC88_RS32295
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32295
old locus tag: AMC88_PC00001
so part of: sequence
location: complement(1025..1552)
location: region:1025-1552:-1
so has part: feature:1025-1552:-1:exon
subclass of: SO_0000010

45961630
type: Gene
SIO_000068: ncbigene

position:1025:-1
position: 1025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1552:-1
position: 1552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025-1552:-1:exon

AMC88_RS32295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32295
old locus tag: AMC88_PC00001
inference: COORDINATES: protein motif:HMM:NF013752.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MHDHALIGGSKLRDVVETVRFCDTQTIELRERADRPARQATLCLRFGQATIRRPQNRREEGLPDGVRLSWVEVVEPDAPDGVEPLHWLLLTTHALSSATDAWQIVAWYKQRWMIEQFFRVMKTQGFKIEHSQLQLAARLEKLVAIAAKAAAIVLQLVQARSGGDPHPASLAISPH
SIO_010081: AMC88_RS32295
subclass of: SO_0000673
so part of: AMC88_RS32295
location: complement(1025..1552)
location: region:1025-1552:-1
so has part: feature:1025-1552:-1:exon

WP_225884166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1025-1552:-1:exon

AMC88_RS25295
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25295
old locus tag: AMC88_PC00002
pseudo: true
so part of: sequence
location: <1592..2347
location: region:1592-2347:1
so has part: feature:1592-2347:1:exon
subclass of: SO_0000010

45960348
type: Gene
SIO_000068: ncbigene

position:1592:1
position: 1592
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2347:1
position: 2347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1592-2347:1:exon

AMC88_RS25295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25295
old locus tag: AMC88_PC00002
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611472.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase core domain-containing protein
SIO_010081: AMC88_RS25295
subclass of: SO_0000673
so part of: AMC88_RS25295
location: <1592..2347
location: region:1592-2347:1
so has part: feature:1592-2347:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1592-2347:1:exon

AMC88_RS25300
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25300
pseudo: true
so part of: sequence
location: 2432..3398
location: region:2432-3398:1
so has part: feature:2432-3398:1:exon
subclass of: SO_0000010

45960349
type: Gene
SIO_000068: ncbigene

position:2432:1
position: 2432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3398:1
position: 3398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2432-3398:1:exon

AMC88_RS25300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053284.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS481 family transposase
SIO_010081: AMC88_RS25300
subclass of: SO_0000673
so part of: AMC88_RS25300
location: 2432..3398
location: region:2432-3398:1
so has part: feature:2432-3398:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2432-3398:1:exon

AMC88_RS25305
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25305
old locus tag: AMC88_PC00005
so part of: sequence
location: complement(4437..5354)
location: region:4437-5354:-1
so has part: feature:4437-5354:-1:exon
subclass of: SO_0000010

45960350
type: Gene
SIO_000068: ncbigene

position:4437:-1
position: 4437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5354:-1
position: 5354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4437-5354:-1:exon

AMC88_RS25305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25305
old locus tag: AMC88_PC00005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007539569.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAKPQTFNNQQSPKRLIGYARVSTDEQVHDAQLDELRAAGCDRIHQEHGSGASRARPVLTRLLAELSAGDVLIVVRLDRLARSVSHLLSVIEDLEARGVHFRSIRDPIDTSTPQGMFSLQVLGAVAQLERALIAERTKAGIKAAKARGKLPGNPGLRERRPEAIKAISQAREKLYLDELTASAQTWLPMVRQLRPQHSWDNVVQVLNRRGHDWTVERLRRAVHRMVREKLAEKELLARSPRRAPEDYLMKLVAAIAIADPNLSLRDIAAQLDQMGERPVRSGKKWQPSSVRVLLDEAHRFGLIRR
SIO_010081: AMC88_RS25305
subclass of: SO_0000673
so part of: AMC88_RS25305
location: complement(4437..5354)
location: region:4437-5354:-1
so has part: feature:4437-5354:-1:exon

WP_040111669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4437-5354:-1:exon

AMC88_RS32300
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32300
pseudo: true
so part of: sequence
location: complement(6347..>6734)
location: region:6347-6734:-1
so has part: feature:6347-6734:-1:exon
subclass of: SO_0000010

45961631
type: Gene
SIO_000068: ncbigene

position:6347:-1
position: 6347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6734:-1
position: 6734
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6347-6734:-1:exon

AMC88_RS32300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019200234.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AMC88_RS32300
subclass of: SO_0000673
so part of: AMC88_RS32300
location: complement(6347..>6734)
location: region:6347-6734:-1
so has part: feature:6347-6734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6347-6734:-1:exon

AMC88_RS25315
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25315
old locus tag: AMC88_PC00008
so part of: sequence
location: complement(6758..7906)
location: region:6758-7906:-1
so has part: feature:6758-7906:-1:exon
subclass of: SO_0000010

45960351
type: Gene
SIO_000068: ncbigene

position:6758:-1
position: 6758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7906:-1
position: 7906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6758-7906:-1:exon

AMC88_RS25315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25315
old locus tag: AMC88_PC00008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012760230.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MIAPKSVPDGIAKRAETLDTIAAVLPIDRRDKLAEILTDQDVETLKHLVNEGMGDNTLRALASDLGYLEAWCLAATGSALPWPAPEALLLKFVANHLWDPARRETDPEHGMPAAVGQALRDGGLLRSTGPHAPATVGRRLANWSTLTKWRGLDGAFASPALKSAIRLAIRAAPRQRLRKSAKAVTSDVLAKLLATCGGNNLRDLRDRAILMVAFASGGRRRSEVAGLRKEQLTIEPPVAGEDGSPLPSLSIHLGRTKNSGAGQDEVVYLTGRPVEALNAWLAAAKISSGSVFRGIDRWGHVSRRALDPKAVNDIVKRRVKMAGLEPGEFSVHGLRSGYLTEAANRGIPLPEAMEQSRHRSVQQASSYYNSATRRSGRASRML
SIO_010081: AMC88_RS25315
subclass of: SO_0000673
so part of: AMC88_RS25315
location: complement(6758..7906)
location: region:6758-7906:-1
so has part: feature:6758-7906:-1:exon

WP_126906698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6758-7906:-1:exon

AMC88_RS34130
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34130
old locus tag: AMC88_PC00009
so part of: sequence
location: 8559..8972
location: region:8559-8972:1
so has part: feature:8559-8972:1:exon
subclass of: SO_0000010

45960352
type: Gene
SIO_000068: ncbigene

position:8559:1
position: 8559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8972:1
position: 8972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8559-8972:1:exon

AMC88_RS34130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34130
old locus tag: AMC88_PC00009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020486329.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MVDFGRHRGFRTVEVIDDDLRRSASGMVARPAPEKLVAALSVGKVGTVLCFDAPRLARNGRDYLPFALAGGQLLFHLISRLYERTSIIVTTNLAFGEWPTVFGDAKMTTALLDRLTHHCEIVETGNESWRFKNRSQS
SIO_010081: AMC88_RS34130
subclass of: SO_0000673
so part of: AMC88_RS34130
location: 8559..8972
location: region:8559-8972:1
so has part: feature:8559-8972:1:exon

WP_089152698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8559-8972:1:exon

AMC88_RS32305
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32305
so part of: sequence
location: 9116..9457
location: region:9116-9457:1
so has part: feature:9116-9457:1:exon
subclass of: SO_0000010

45961632
type: Gene
SIO_000068: ncbigene

position:9116:1
position: 9116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9457:1
position: 9457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9116-9457:1:exon

AMC88_RS32305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32305
inference: COORDINATES: protein motif:HMM:NF024487.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA domain-containing protein
translation: MTPFVVVQDNLRDKLVDSRVLDGWVDGPRTWVRDRVGTVQTVQGREADIVFFVLSAQSPSQQGARAWAGGRPNLANVGVTRAKTSLFVIGNRAAWKSAGFFAALHRYLPQRNL
SIO_010081: AMC88_RS32305
subclass of: SO_0000673
so part of: AMC88_RS32305
location: 9116..9457
location: region:9116-9457:1
so has part: feature:9116-9457:1:exon

WP_077991556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9116-9457:1:exon

AMC88_RS25325
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25325
old locus tag: AMC88_PC00010
so part of: sequence
location: complement(9505..12876)
location: region:9505-12876:-1
so has part: feature:9505-12876:-1:exon
subclass of: SO_0000010

45960353
type: Gene
SIO_000068: ncbigene

position:9505:-1
position: 9505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12876:-1
position: 12876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9505-12876:-1:exon

AMC88_RS25325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25325
old locus tag: AMC88_PC00010
inference: COORDINATES: protein motif:HMM:NF024589.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MNATKHDTPENAALVLRRRAAVVGTFDPVAFLQLPVRAEDKEAFEDRVLAFLSPMMEEVIEDKRVLWRLRPQPRRDTLREMAAEGVLEQTVRQTKPQVSDRFGQVLQAMLKKGAAAGDPRKMSTDDLMLQALALDFVRSLPTDWPVREPPVDPRVMLARKAERRRQDFVAPRKLFGRALEAHALDQYIESGLLQQPLVALPKPPSDFARLRPLLVTGIGGSGKSALVADLMRRTQKDDWSGPICVWIDFDQRNVALGGEREWLNEVTRQIGFARPAAAERLSAIRNAARNDLHRLTQESGDVERLSGTESLNVVSSMREEMQRALGDGMFAEQTLVVLVDTFEEVLVRSNMKAPFLDQEPFGLVLEFLNSLEVLRCHDGRPLFKDVRAVVAGRAHPFQGDDGDAARWFEARLEIGELGPEAAVEFLRSRADRQIFTQARSRRLVGAIPRFPIVLLLLAAFSRGRTAAEIEEAATLAEGSGVLGAASSTRVLYSRFLHRLKDHIVTDAAGERLISRDDLSKLAHPGLALTVVTPTLIREVLAGPTALGAIDVQKSIDLFEALSREVWLVERSGDDAIRHVPVLRRIMLPMLDSDLSPAGNSEIPMRETVRAVHRAAANWYRAGGGAGEPDAATLAAYHDAFLGEVGLLLTDPSLVRRLIDLAGEDVFAMPLAARAILRREDKSDIGLSNQETAALPVDARRKAVATRRAERARLGVTSRQAERYEPIGDLEMEQLALIDAGSDEHSYQGSGHGRQLDIVEDIDTARRIAALFSEADFEGVVRSGRSGVLRMAEAPEHEPPLDKLGDLTSHWLWKWALSCLATGAVQESDLLWATESASFPFQPSSRNPFALGTLLALAVATVALGRTPAFVDHAPYRDAITAYPVLASAPIASILSLRLHALSKYWNPALMAYPRNYFDVRADITQVVAIWGMLKPDEREGSTLLQIPGTLFRQIDEFQSGPPASTDLKILDAPEAFFRVSNEGVPAYRSAHGGMARAMETVLRGRTPELYDPIRAALGDVAADDPSGFGEALDVIAAGTPFWPSDCHPGQLFSTRHNLREIDFFLARLVVFLDLAGLTQDLFAALSASAQRGRRFVAVAGLLHRYDSLLRLPRFDEMVAAGGA
SIO_010081: AMC88_RS25325
subclass of: SO_0000673
so part of: AMC88_RS25325
location: complement(9505..12876)
location: region:9505-12876:-1
so has part: feature:9505-12876:-1:exon

WP_016737365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9505-12876:-1:exon

AMC88_RS25330
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25330
old locus tag: AMC88_PC00011
so part of: sequence
location: complement(12873..14945)
location: region:12873-14945:-1
so has part: feature:12873-14945:-1:exon
subclass of: SO_0000010

45960354
type: Gene
SIO_000068: ncbigene

position:12873:-1
position: 12873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14945:-1
position: 14945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12873-14945:-1:exon

AMC88_RS25330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25330
old locus tag: AMC88_PC00011
inference: COORDINATES: protein motif:HMM:NF024758.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trypsin-like peptidase domain-containing protein
translation: MSEGPDELDPGRLSRQVKVTRETFEKAFDAFAEVSPDERIPFKAVALKRQRAAPLGPGRERDFADFEAALRYASDKGFLQGFCSAGGATLFKASSEDDGTGGVVMAAALVADARDRASVLVTFEAIVNDQERFRDPDDVNAAVMRAQRCTCRIVVRDGARRTRGTGFLIGPRLVLTNWHVVRSLLEPMSDEEAAAAGLAPAESWKAAAGSAARLGVEFDFTARAAQAGGVIRIGVIENWLVAASSAEGSERTGSEGAGDWPADGADFEPYDDFAVIEIAEPAGLERRFYDIVSEDPPMPRGNMVLLHHPGEFSMRLSYGSFDLGLPAANLLGGVPAKTSARILHSANSIGGSSGAPCFNFDMMPVALHQAGVTYGGNSDISDDNGDPVPSANVNIAIPLRRIRAKAGPAIIARMGALQALKPALSNGDPLIGRGELQEAIAEASRGKVKILIVRADLGVDGKPLQRVGKSFSRRILREFLDLAEHEIVEISAANLMQNAYRTAAALLEAVSAGRSSALTPVDDSSLPADRQSTEINDVVMRVAGELKAELVRIAGQRTLWLVIDELEKHALPDTTTRTLLDRLYADVSVEPSLRLVMLGLVDVDLPSLQGIKAKRLEKPLTHLDSSRVASWVGNRVDGRFGLPDVACECLAAVVSSVASSRVSETFSMTQAVAAVVRNDLDPHLKKRMGV
SIO_010081: AMC88_RS25330
subclass of: SO_0000673
so part of: AMC88_RS25330
location: complement(12873..14945)
location: region:12873-14945:-1
so has part: feature:12873-14945:-1:exon

WP_064820001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12873-14945:-1:exon

AMC88_RS25335
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25335
old locus tag: AMC88_PC00012
so part of: sequence
location: complement(14954..17746)
location: region:14954-17746:-1
so has part: feature:14954-17746:-1:exon
subclass of: SO_0000010

45960355
type: Gene
SIO_000068: ncbigene

position:14954:-1
position: 14954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17746:-1
position: 17746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14954-17746:-1:exon

AMC88_RS25335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25335
old locus tag: AMC88_PC00012
inference: COORDINATES: protein motif:HMM:NF012311.2
GO function: GO:0008236 - serine-type peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S8 family serine peptidase
translation: MIELDILRSVCEACDAEDPVLRPGIIRFELELKRPDDAGGLEAHIAGLLKDGRFVLQPLDPLLPTFYVLQFPGVARTIAPDRLFAIADYLAGELELVSCTPDIGSTLYAEPDAHRLDRTNPESAAVDALCWSKASAPTDFHWSAKAVRAPEAWAISPKKGAGIIVAQPDTGVASHPELDTEALRFDLAIDIVGGDKDPADPLDPSFANPGHGTATASVVVSRERGQMVGTAPAASLVPIRCTTDVKIFDGTPVAAAILHAVKIKADIITMSLGGIFSRSISAAIGVAVDRGLIVLAAAGNCVNFVVYPASDDRVIAVAGVDSNDKPWKGTSAGPSVTIAAPAENVYVARRTPNDLGIGTVSGGQGTSFAVTTTAGVAALWLARFGRDKVRAEAKRRGVSVQALFRAALTATARRPARWNSWLYGAGVVDAAALLRLALAKIPAATGNEIAPEAVPDAPESAAVAQVFADAQSTDVVWARYGAEASYLAADAWRRGDAGRSALLETPARPLPSPGLQAKAPTVLKRSLRFANAVPHLQAPILAPTPPARHPLTIIAPLKPGQESTAENARASLAGTGLRDLQDLIEGTLTQIESQTESTPEATAARRDLLNSTEAVVRQLASDGEAALSIEGRIVTEALVRLKGRPAFKVEDGAISSKHAEFTDWSALLTAAKQYLPALCASVGRIDVAGAHVGTGWVAGPGLVVTNRHVAEAIADVVVKRGSGSKWFMRDGVTINFSDNGRGNELRFKVKGVAAAGDAQIGRSVDFAHLDMVVLDVETENTTAKLPATVGLTGDPGEAATLQDIAVVGYPARPDRSALEDPSGKEATETIGGRLAMIFGLDYGRKYFSPGTIVQAAGGVKADGNHWIFSHDATTLGGSSGSAIITFSNDLPILGLHFAGQVMTANYAHSLAAVKQSPFIGADVTERMVWR
SIO_010081: AMC88_RS25335
subclass of: SO_0000673
so part of: AMC88_RS25335
location: complement(14954..17746)
location: region:14954-17746:-1
so has part: feature:14954-17746:-1:exon

WP_125462012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14954-17746:-1:exon

AMC88_RS25340
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: dcd
locus tag: AMC88_RS25340
old locus tag: AMC88_PC00013
so part of: sequence
location: complement(17966..18544)
location: region:17966-18544:-1
so has part: feature:17966-18544:-1:exon
subclass of: SO_0000010

45960356
type: Gene
SIO_000068: ncbigene

position:17966:-1
position: 17966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18544:-1
position: 18544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17966-18544:-1:exon

AMC88_RS25340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: dcd
locus tag: AMC88_RS25340
old locus tag: AMC88_PC00013
EC number: 3.5.4.13
inference: COORDINATES: protein motif:HMM:TIGR02274.1
GO function: GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO process: GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dCTP deaminase
translation: MIGRLNLAPGADGGMLAIVPRPDLGRLAAVGAASLDLRLGRWFRTLRHSRTSLLRVSEPDEDPVPTKEHFVRFGEEFILHPHNFVLGTTLEWMRLPADLAGYVTGKSSLGRRGLIIETAAGIQPGFAGCLALELSNVGEVPIALQPGMEICQIFLHDVGPDAKFAKSQFTGRRKPVLGNVRSDDVLRRLSSK
SIO_010081: AMC88_RS25340
subclass of: SO_0000673
so part of: AMC88_RS25340
location: complement(17966..18544)
location: region:17966-18544:-1
so has part: feature:17966-18544:-1:exon

WP_009993369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17966-18544:-1:exon

AMC88_RS25345
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25345
old locus tag: AMC88_PC00014
so part of: sequence
location: complement(18568..19818)
location: region:18568-19818:-1
so has part: feature:18568-19818:-1:exon
subclass of: SO_0000010

45960357
type: Gene
SIO_000068: ncbigene

position:18568:-1
position: 18568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19818:-1
position: 19818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18568-19818:-1:exon

AMC88_RS25345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25345
old locus tag: AMC88_PC00014
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNGSLDIDFVRQKLLSVIDQIKHLQTSEFPYQESREALKLLADLYGRELNRLSGIGPTTDHTIRQQVTAQVNAYIARYYTVLGFILRSTNVRNAFEIYDPLLRMSQTIYGPEAKLIVSSEWSFSPFTYPAITDEFPNLMFIGLPATESGNPLIVPLAGHELGHSIWRKKPHRSPHLSALDATLQSRLVGEYQNSWSEFQQLFDVQTKPADLLSDLFLRSIWARSYRLATRQIEELFCDIIGLRLFGESYLYSFIYLIAPHTGERAAYYPSLGSRVTALESAARAFGITEPPAFSGYFIDLPKRLQANEAFCLRMADQASTAMIEDLIAAVSGHVARTGLALPSDAERDRIVKQFCALSPAASTTSIGDTINAGWAIRLNWAHWKNFNFREDTRLEILNDLVFKTMEVMEFESRTR
SIO_010081: AMC88_RS25345
subclass of: SO_0000673
so part of: AMC88_RS25345
location: complement(18568..19818)
location: region:18568-19818:-1
so has part: feature:18568-19818:-1:exon

WP_016737369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18568-19818:-1:exon

AMC88_RS25350
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25350
old locus tag: AMC88_PC00015
so part of: sequence
location: complement(19799..20215)
location: region:19799-20215:-1
so has part: feature:19799-20215:-1:exon
subclass of: SO_0000010

45960358
type: Gene
SIO_000068: ncbigene

position:19799:-1
position: 19799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20215:-1
position: 20215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19799-20215:-1:exon

AMC88_RS25350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25350
old locus tag: AMC88_PC00015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDFPSLALDAAIELDKLEKRQPADLATIQRFGHYLEAPPSGGRPVSLFALSENPVNVEILNSAIFHTEGASLSNFNDLEQWVRDLVAQAKAIAAGESTGSEEIGSLKRFCLSLHQVLLEELTPAPDDEWMPAYDERVA
SIO_010081: AMC88_RS25350
subclass of: SO_0000673
so part of: AMC88_RS25350
location: complement(19799..20215)
location: region:19799-20215:-1
so has part: feature:19799-20215:-1:exon

WP_016737370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19799-20215:-1:exon

AMC88_RS25355
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25355
old locus tag: AMC88_PC00016
so part of: sequence
location: complement(20678..21346)
location: region:20678-21346:-1
so has part: feature:20678-21346:-1:exon
subclass of: SO_0000010

45960359
type: Gene
SIO_000068: ncbigene

position:20678:-1
position: 20678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21346:-1
position: 21346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20678-21346:-1:exon

AMC88_RS25355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25355
old locus tag: AMC88_PC00016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003546056.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MTDATRRHSVATEAYLIMDEKARAEAEARNGLLQFDLARDMIVDAIDKGEKWKLRPSMLLSLHREALQGISIYAGNFRPAEVSIEGSKHKPVGAFQVPGLIEDLCDYVNDNWTEKTAVHLASFVMWRLNWIHPFSDGNGRTSRMVSYLVLCVKLQLPLPGVKTIPDQIVDNRRPYFDALEAADAASEDGAFDLTKMEELIEGMLATQLASVLETATGKHFLS
SIO_010081: AMC88_RS25355
subclass of: SO_0000673
so part of: AMC88_RS25355
location: complement(20678..21346)
location: region:20678-21346:-1
so has part: feature:20678-21346:-1:exon

WP_016737371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20678-21346:-1:exon

AMC88_RS25360
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25360
old locus tag: AMC88_PC00017
so part of: sequence
location: complement(21339..21521)
location: region:21339-21521:-1
so has part: feature:21339-21521:-1:exon
subclass of: SO_0000010

45960360
type: Gene
SIO_000068: ncbigene

position:21339:-1
position: 21339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21521:-1
position: 21521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21339-21521:-1:exon

AMC88_RS25360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25360
old locus tag: AMC88_PC00017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003546057.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNEPLRNLLEAARKVQLSKSDIEVQRRSFAYGNTHFENEMITRELVDRVADEMADQKKHD
SIO_010081: AMC88_RS25360
subclass of: SO_0000673
so part of: AMC88_RS25360
location: complement(21339..21521)
location: region:21339-21521:-1
so has part: feature:21339-21521:-1:exon

WP_009991623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21339-21521:-1:exon

AMC88_RS33285
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33285
so part of: sequence
location: 21974..22213
location: region:21974-22213:1
so has part: feature:21974-22213:1:exon
subclass of: SO_0000010

45961730
type: Gene
SIO_000068: ncbigene

position:21974:1
position: 21974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22213:1
position: 22213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21974-22213:1:exon

AMC88_RS33285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMDAATTGQLRSFSYHEIGAPSRRTNEKAERFPDWSAKAAELCRKTSADYVGKLPQPPLTLRKMIAWHFRLAVFKPPTL
SIO_010081: AMC88_RS33285
subclass of: SO_0000673
so part of: AMC88_RS33285
location: 21974..22213
location: region:21974-22213:1
so has part: feature:21974-22213:1:exon

WP_125462013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21974-22213:1:exon

AMC88_RS25370
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25370
old locus tag: AMC88_PC00019
so part of: sequence
location: 22464..25298
location: region:22464-25298:1
so has part: feature:22464-25298:1:exon
subclass of: SO_0000010

45960361
type: Gene
SIO_000068: ncbigene

position:22464:1
position: 22464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25298:1
position: 25298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22464-25298:1:exon

AMC88_RS25370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25370
old locus tag: AMC88_PC00019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005484797.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxidase family protein
translation: MCMSSGHIWRENYEGGNPEAEALLFAELARDIMDVQLANRANARASDISRAFHAKCILGVDNAKLQILPNIPEDLEVGFFERGKQYDVTVRLSNANGVRQADFKKDMRGIALRVKVSENEYHDFLATNFPVSHARNAYQFVAFAKAMSGSKLLLLPRLVLAVGFSETLRMLRNVLRGARVVDSLATEGYWSRGALLWGNEAGPVRFLLRPSAKTTAAKPASATDPDFLHREIAERLREGPVEFDFLLQRYVDEKLTPIEDGAVEWTEDASRPIGVATLTIPSQDIDAAPGRAMERLVDQLGFNPWNTTETFRPLGNLNRVRKAAYTASSAHRLNQRFRERKPLRNIVIARAVAALFKAINAHVPWYRFGWRMSLLNISILREELRTKNLFDTELPDAPPQATPQPPVIPEAVRTQRTFDGTYNDLSNPRMGAEGATFGRTMRAVYKPELFGQPNPIEVSRQLMTRKAFIPARSLNVLAAAWIQFQVHDWVNHKRHSLGNAETDIALRMPNGELWKSTTGGQPEAFMRIAGNEVFRMAAGGYPIFKNMTTPWWDGSEVYGNTAEKALDLRDGGRLKLTEDLYLPTELNGMNVTGFNESWWLGLSMMHTLFAREHNVLAEALMREYPDWEPDRIYNTARLIVSALIAKIHTIEWTPAILATRAIKVGLPANWYGAPKDWLTQLGIWMLDTHELKGIPQTVPDHHGIPYSLTEEFVSVYRLHPLIPDDYQFFNYETGARTETLGFADIQGAGTDAKMRHLRLHNVIYSLGIAHPGAITLHNYPNALRQFKRMSGDVEEIIDLSVVDIVRDRHRGIPRFNDFREALHKPRLSNWEELSSDPETVRAMQVLYGNIDMVDTMVGLHSEPPPDGFGFSDTAFRVFILMASRRLQSDRFLTVDFRPEIYSPLGLDWIENNGMTSIILRHCPQLAPVLPRTASAFAPFRPILS
SIO_010081: AMC88_RS25370
subclass of: SO_0000673
so part of: AMC88_RS25370
location: 22464..25298
location: region:22464-25298:1
so has part: feature:22464-25298:1:exon

WP_029532335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22464-25298:1:exon

AMC88_RS25375
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25375
old locus tag: AMC88_PC00020
so part of: sequence
location: 25309..26967
location: region:25309-26967:1
so has part: feature:25309-26967:1:exon
subclass of: SO_0000010

45960362
type: Gene
SIO_000068: ncbigene

position:25309:1
position: 25309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26967:1
position: 26967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25309-26967:1:exon

AMC88_RS25375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25375
old locus tag: AMC88_PC00020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: cytochrome c
translation: MPISRDRLYRLFRFLLVSVNLLVLITLVATGIFIRLEGDWVHPTIRDPKDAFENGTIGTELMPLPVALVLPDLFPEHFQPAGADAGDWVKQFGFLPYDNPEANNGLPLGFATSNYRPGSAAPSPVPFVGFSCALCHTTRIRKSEESKGVVVYGPGSVSINLFAWIDAFQAAVLTRVKPQRDGETDMERPYRLTVDSICDSYRAKTGETLGSIQRLLIGLWLRQVRARIEAGLPRFDEPIGNYRSRDADVTPTGPTRTQPFRTLVRTVLDRPGNDMPVYTKIATVFSEDHRARAQFDGSIGDIYARSSLAALAAGATVTNMAKPEIADNIRKASDFTKTLRPLRYSDMFPEDAASIDPARILQGRKVYGQYCAACHGDRDSTGAWVNGEKTGQVVPAGELNTDPERVRFRHYGPLAEKMFALFPDKHPFHFKREDIWPQRGQEEETSIRGYVNAPLDGMFLRAPYLHNGSVMTLAELINLRKRRDVFYRGDNTYDPADVGFRSPESADDRNYFTFDTTQIGNSNRGHDYPWAYDDPKRNPDDLAALLDYLKML
SIO_010081: AMC88_RS25375
subclass of: SO_0000673
so part of: AMC88_RS25375
location: 25309..26967
location: region:25309-26967:1
so has part: feature:25309-26967:1:exon

WP_016737375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25309-26967:1:exon

AMC88_RS25380
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25380
old locus tag: AMC88_PC00021
so part of: sequence
location: 26984..27571
location: region:26984-27571:1
so has part: feature:26984-27571:1:exon
subclass of: SO_0000010

45960363
type: Gene
SIO_000068: ncbigene

position:26984:1
position: 26984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27571:1
position: 27571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26984-27571:1:exon

AMC88_RS25380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25380
old locus tag: AMC88_PC00021
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAMPPNSITLPQFSLAFVTFGVLLVLALLWPETTLDDVDLGRTKATIWVTSLMLLPSLALYPYRTLSQRMANVVHLFWTFAYLLFLVHAYWAIFVIFNGLKDTFVQMGIPIASINFLLVILWGLDVLLLWFAPSRTPPAARFQIAVRTLTFLIFATTFLFLRSGPVHILGIIFAAVISLSLAIRLWVRERAVQY
SIO_010081: AMC88_RS25380
subclass of: SO_0000673
so part of: AMC88_RS25380
location: 26984..27571
location: region:26984-27571:1
so has part: feature:26984-27571:1:exon

WP_009991263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26984-27571:1:exon

AMC88_RS25385
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25385
old locus tag: AMC88_PC00022
so part of: sequence
location: 27622..28986
location: region:27622-28986:1
so has part: feature:27622-28986:1:exon
subclass of: SO_0000010

45960364
type: Gene
SIO_000068: ncbigene

position:27622:1
position: 27622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28986:1
position: 28986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27622-28986:1:exon

AMC88_RS25385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25385
old locus tag: AMC88_PC00022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007267782.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSEETNKTGFERLLERPLIQTILQRRTHRIGRGVPLIKAGTMTYQSTQKPVPLTDLEEAILIAMTGLTGLTMPDRPFEDPVTGEFVMAKPNVHMEGRTAGSPDNAQGTYFFLINDTGTYFIDRVPFTPPLSFEPEALIAHAKRAKVKISNGRLDTANREFPAYLDSNRLLSNLPGTTVLFPVVDLSHQYINGLMYLLTQPEGHRPTIVDDRNFYLRAGVGKWVKNRFLNEEIKVPLGVIGSLRTQIEADLLLQNLMLVADAMGLGAYIHASISPPVLLGDPKFRDSYGPMLGFDFAVPKWRLLDILRWQVPLPKYSSLRAHPVGLRLGDRDLIKAKSPPNYQNMREAVDEVVSAKFGSQGIYKDAALFKGIYKDDFGDRYLTEAAEYSSDVIECVTDICEYIYDTHGRFPAHVDAIHVPGVWIQVHHVDLEYYNRYFKNALTGAHHDHDNHWH
SIO_010081: AMC88_RS25385
subclass of: SO_0000673
so part of: AMC88_RS25385
location: 27622..28986
location: region:27622-28986:1
so has part: feature:27622-28986:1:exon

WP_016737376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27622-28986:1:exon

AMC88_RS32310
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32310
pseudo: true
so part of: sequence
location: complement(<29021..>29263)
location: region:29021-29263:-1
so has part: feature:29021-29263:-1:exon
subclass of: SO_0000010

45961633
type: Gene
SIO_000068: ncbigene

position:29021:-1
position: 29021
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:29263:-1
position: 29263
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29021-29263:-1:exon

AMC88_RS32310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003590950.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA polymerase IV
SIO_010081: AMC88_RS32310
subclass of: SO_0000673
so part of: AMC88_RS32310
location: complement(<29021..>29263)
location: region:29021-29263:-1
so has part: feature:29021-29263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29021-29263:-1:exon

AMC88_RS25395
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25395
old locus tag: AMC88_PC00025
pseudo: true
so part of: sequence
location: 29320..30554
location: region:29320-30554:1
so has part: feature:29320-30554:1:exon
subclass of: SO_0000010

45960365
type: Gene
SIO_000068: ncbigene

position:29320:1
position: 29320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30554:1
position: 30554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29320-30554:1:exon

AMC88_RS25395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25395
old locus tag: AMC88_PC00025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611960.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: AMC88_RS25395
subclass of: SO_0000673
so part of: AMC88_RS25395
location: 29320..30554
location: region:29320-30554:1
so has part: feature:29320-30554:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29320-30554:1:exon

AMC88_RS25395
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 396
locus tag: AMC88_RS25395
old locus tag: AMC88_PC00025
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.1
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: AMC88_RS25395
subclass of: SO_0000673
so part of: AMC88_RS25395
location: 29607..29723
location: region:29607-29723:1
so has part: feature:29607-29723:1:exon

position:29607:1
position: 29607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29723:1
position: 29723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29607-29723:1:exon

AMC88_RS25400
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25400
so part of: sequence
location: complement(30556..30747)
location: region:30556-30747:-1
so has part: feature:30556-30747:-1:exon
subclass of: SO_0000010

45960366
type: Gene
SIO_000068: ncbigene

position:30556:-1
position: 30556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30747:-1
position: 30747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30556-30747:-1:exon

AMC88_RS25400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25400
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVGKADLGSEAGLGEQATCEHEQLEHDGDEEILAIFPAALNVFAKRARAGGLNRAGFAGDRLV
SIO_010081: AMC88_RS25400
subclass of: SO_0000673
so part of: AMC88_RS25400
location: complement(30556..30747)
location: region:30556-30747:-1
so has part: feature:30556-30747:-1:exon

WP_016737380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30556-30747:-1:exon

AMC88_RS25405
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25405
old locus tag: AMC88_PC00026
so part of: sequence
location: 31247..32887
location: region:31247-32887:1
so has part: feature:31247-32887:1:exon
subclass of: SO_0000010

45960367
type: Gene
SIO_000068: ncbigene

position:31247:1
position: 31247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32887:1
position: 32887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31247-32887:1:exon

AMC88_RS25405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25405
old locus tag: AMC88_PC00026
inference: COORDINATES: protein motif:HMM:NF014869.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M4 family metallopeptidase
translation: MKSFSMHVSDAGSAPMFAALAKEQSDLPTFAFEPAATQVVDPETAARRYLGHALTSNSVPDFTAPSAENADSQFKVIGTETVPLTHTRTVKFRQAFHDIPVYGSLVTVELDDDNKLVSLNSALGEPTNVPPVAKISATRAASAVDKKGQFKKKIAGVAPRLSFYYEAKKDKWHLAYIFEDVEVTMPESAGSGPLRPRYFDYVVDANTGRVIAELPRTPTMAAEEQLAFDARNVQRTINVEKIGARAVLKDTVNNIQTFDFRFRDPNVNDALLPGDEIGPAWPPAAVSAHANAAAVAHFLREVVLRNNIDNRGGPMNASINCVVMRESPGGNQWFNAYWNGVQMVYGQVLNGNQLLTLAAALDIVGHEMFHGVTDNTSRLEYAAQSGALNESYSDIFGMLIANRGNPDPRQWDWRLGQGFARGGGPIRDMSDPASRGQPAHMNQYRIMPVTQNGDWGGVHVNSGIHNKAAYLMLVAEEGGSLVFTPDEVAAVFYVAVTQLLSRTSQFRDSRRAVVSAARTLFRTAPSAQLARRISAIDASFDGVGIA
SIO_010081: AMC88_RS25405
subclass of: SO_0000673
so part of: AMC88_RS25405
location: 31247..32887
location: region:31247-32887:1
so has part: feature:31247-32887:1:exon

WP_016737381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31247-32887:1:exon

AMC88_RS25410
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25410
old locus tag: AMC88_PC00027
so part of: sequence
location: 32957..33349
location: region:32957-33349:1
so has part: feature:32957-33349:1:exon
subclass of: SO_0000010

45960368
type: Gene
SIO_000068: ncbigene

position:32957:1
position: 32957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33349:1
position: 33349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32957-33349:1:exon

AMC88_RS25410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25410
old locus tag: AMC88_PC00027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003532611.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFSGIWSYRSLVNNPDLSASFDSLRFGAGTLILSEPAPGKIGGSLGGTGWSLSLDGAATDGAPATLKWQGRGMIDNEEWVYDYLGYPVPRWPNGVDQIDTIVGTVIRTVTHSNGQSPAGYTATFYAVRV
SIO_010081: AMC88_RS25410
subclass of: SO_0000673
so part of: AMC88_RS25410
location: 32957..33349
location: region:32957-33349:1
so has part: feature:32957-33349:1:exon

WP_029532339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32957-33349:1:exon

AMC88_RS25415
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25415
old locus tag: AMC88_PC00028
so part of: sequence
location: 33422..35023
location: region:33422-35023:1
so has part: feature:33422-35023:1:exon
subclass of: SO_0000010

45960369
type: Gene
SIO_000068: ncbigene

position:33422:1
position: 33422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35023:1
position: 35023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33422-35023:1:exon

AMC88_RS25415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25415
old locus tag: AMC88_PC00028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008886200.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosinase family protein
translation: MRKRENIFELGSDWADPILWYARGVKAMKARKLEDPTSWNFYAAIHGMWRGLWDFYQITDSADADPNASDTSTYLDQCQHQSWYFLPWHRGYLLALENMLRHEIELLNGPSASWALPYWNYFGTDQDVLPPAFRTANWPDGTGDNPLFVEQRWGVLSSSTPFDVSSQTNLNAMQDPEFAGPGGGGSAGFGGVETGFSWSGEESGGIESDPHNIIHVLVGGGHPTLVFPPGSPQAGRPLPGLMSTPTAAALDPIFYLHHCNIDRLWESWNKFPTGKPFTSPTDWQNPTDSKWLDGPASIGEREFTMPNPDKTKWVYTPTKMQDLASLGYEYDDLTPGAEAGPIVTVAARMERLGIARSSVAATRGLDMPTQNKVELVAASDSGMSLAGSGTMRSSVKVEPDARARVSQSLSANRIAPTAPDRVFLNLENVTGVHDAVIFQVYVGLPEGADPAGNKKYLAGSVALFGVTQASDPAGKHSGNGITYKLEITDIVDKMHLDGEFDVARLPVSFVPLENIPDAANIKIGRISIYRQFE
SIO_010081: AMC88_RS25415
subclass of: SO_0000673
so part of: AMC88_RS25415
location: 33422..35023
location: region:33422-35023:1
so has part: feature:33422-35023:1:exon

WP_016737383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33422-35023:1:exon

AMC88_RS25420
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25420
old locus tag: AMC88_PC00029
so part of: sequence
location: 35248..35841
location: region:35248-35841:1
so has part: feature:35248-35841:1:exon
subclass of: SO_0000010

45960370
type: Gene
SIO_000068: ncbigene

position:35248:1
position: 35248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35841:1
position: 35841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35248-35841:1:exon

AMC88_RS25420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25420
old locus tag: AMC88_PC00029
inference: COORDINATES: protein motif:HMM:NF021465.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2182 domain-containing protein
translation: MMVMAMMLPTLSVPLRHVRERSFWRVRPWAELLFVVSYLGTWMVAGIALLGVAITLRLASTSSALPLVACLIIAFIWQISPWKQVALNRCHRRPSLAAFPPAAYENVLAWGMTHGLWCIASCWGLMLLPLLAPSHHLPLMAIVAVYIWAERLEPACAPRWQFRVPSRAIRLIARNVAGWRQSSGSTSITMACDECAL
SIO_010081: AMC88_RS25420
subclass of: SO_0000673
so part of: AMC88_RS25420
location: 35248..35841
location: region:35248-35841:1
so has part: feature:35248-35841:1:exon

WP_257784653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35248-35841:1:exon

AMC88_RS25425
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25425
old locus tag: AMC88_PC00030
so part of: sequence
location: complement(36045..36770)
location: region:36045-36770:-1
so has part: feature:36045-36770:-1:exon
subclass of: SO_0000010

45960371
type: Gene
SIO_000068: ncbigene

position:36045:-1
position: 36045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36770:-1
position: 36770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36045-36770:-1:exon

AMC88_RS25425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25425
old locus tag: AMC88_PC00030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018517447.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2726 domain-containing protein
translation: MHYRQRSVLSAAPWLIIGAAVVGASSGVTVADFEKPELLIAALLVGLIIGMSVEQFLTRTSRQAWRERNRSRSEERRWNERIIQEPRLQTPAAEPLRPVDATDQLRIVMRSNFTIQPLLNKSEARVFRELDSVVIGCNSTWQVMAQVSLGEILRSADPDAYSCINSKRVDLLLVDGNCQPRHVIEYQGGAHHQGTAAARDAVKKEALRRAGIGYYEVVAGQTTPSELRRLVEKLVDNPRVT
SIO_010081: AMC88_RS25425
subclass of: SO_0000673
so part of: AMC88_RS25425
location: complement(36045..36770)
location: region:36045-36770:-1
so has part: feature:36045-36770:-1:exon

WP_016737385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36045-36770:-1:exon

AMC88_RS32315
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32315
so part of: sequence
location: 37369..38043
location: region:37369-38043:1
so has part: feature:37369-38043:1:exon
subclass of: SO_0000010

45961634
type: Gene
SIO_000068: ncbigene

position:37369:1
position: 37369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38043:1
position: 38043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37369-38043:1:exon

AMC88_RS32315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489415.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MKKVQRSFAVEYKSGRRKLDTRSNSIWGNVDLKSVARDLDKEAMPFLSDSSQSGKSNSEISLPKPDQAESLLTPPLEPSTTASDTQETSMADETDTATSADVPAVVETPITPKKQRKPRAKKAAALETASADTTAEPAAALAGAGGVKRRGRKTKVVEAAASAKRAPVRRAPKAVQPAPAAPMTAIDEMADLLQLEEENQRLRKLLAEKLRAENADLRKRLKLD
SIO_010081: AMC88_RS32315
subclass of: SO_0000673
so part of: AMC88_RS32315
location: 37369..38043
location: region:37369-38043:1
so has part: feature:37369-38043:1:exon

WP_008534132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37369-38043:1:exon

AMC88_RS25435
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25435
old locus tag: AMC88_PC00032
pseudo: true
so part of: sequence
location: 38171..38724
location: region:38171-38724:1
so has part: feature:38171-38724:1:exon
subclass of: SO_0000010

45960372
type: Gene
SIO_000068: ncbigene

position:38171:1
position: 38171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38724:1
position: 38724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38171-38724:1:exon

AMC88_RS25435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25435
old locus tag: AMC88_PC00032
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012760201.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AMC88_RS25435
subclass of: SO_0000673
so part of: AMC88_RS25435
location: 38171..38724
location: region:38171-38724:1
so has part: feature:38171-38724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38171-38724:1:exon

AMC88_RS25440
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25440
old locus tag: AMC88_PC00034
so part of: sequence
location: 38860..39954
location: region:38860-39954:1
so has part: feature:38860-39954:1:exon
subclass of: SO_0000010

45960373
type: Gene
SIO_000068: ncbigene

position:38860:1
position: 38860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39954:1
position: 39954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38860-39954:1:exon

AMC88_RS25440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25440
old locus tag: AMC88_PC00034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003590941.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GSU2403 family nucleotidyltransferase fold protein
translation: MKSIDLMYQTMLAELGQRSLDAAWTADFPPEGRFTPANIKGRKYWYFDIPDGHGGTKRRYVGSADDPVIAQRVADHKRDKDDLRARRRLVNTLTREGGMIAPDAMSGDIVEALADGGLFRLRGILIGTVAFQCYSGLLGVRLPMAAILTGDADIAQDYAISREVEDSLPPILELLQGVDASFRPVPHRSGAAVSSAFQNADGYRVEFLTSNRGSDDYIDQPAKMPALGGASADPLRFLDFLIREPVRTMLLHRSGVPVVVPDPSRYAVHKLIVASRRNTDGQGPAKREKDIRQAALLFEALQQTRRSTDLALVYNEAWRRGPTWREGIRTGAGMLPAQDAERLNTVLTEGGKRNGEEIELPFGE
SIO_010081: AMC88_RS25440
subclass of: SO_0000673
so part of: AMC88_RS25440
location: 38860..39954
location: region:38860-39954:1
so has part: feature:38860-39954:1:exon

WP_012489416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38860-39954:1:exon

AMC88_RS34465
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34465
pseudo: true
so part of: sequence
location: 40146..>40271
location: region:40146-40271:1
so has part: feature:40146-40271:1:exon
subclass of: SO_0000010

72656891
type: Gene
SIO_000068: ncbigene

position:40146:1
position: 40146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40271:1
position: 40271
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40146-40271:1:exon

AMC88_RS34465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34465
inference: COORDINATES: protein motif:HMM:NF012350.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AMC88_RS34465
subclass of: SO_0000673
so part of: AMC88_RS34465
location: 40146..>40271
location: region:40146-40271:1
so has part: feature:40146-40271:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40146-40271:1:exon

AMC88_RS34140
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34140
old locus tag: AMC88_PC00035
so part of: sequence
location: 40405..40878
location: region:40405-40878:1
so has part: feature:40405-40878:1:exon
subclass of: SO_0000010

70363062
type: Gene
SIO_000068: ncbigene

position:40405:1
position: 40405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40878:1
position: 40878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40405-40878:1:exon

AMC88_RS34140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34140
old locus tag: AMC88_PC00035
inference: COORDINATES: protein motif:HMM:NF012905.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD family hydrolase
translation: MRLADRFSVWFLFATVAIAGVSAFMSGDLSRIVAVLVVATPCPLILAVPVALAKEGVLVKGAGPLEALVQATVAVFDKTGTLTAGQPEVGHIEGSEHPNRILRLAASLDQASGHVVGRALVDEAHRRGLGVSRPSEVTETAGSGIVDGVRVGVGGDA
SIO_010081: AMC88_RS34140
subclass of: SO_0000673
so part of: AMC88_RS34140
location: 40405..40878
location: region:40405-40878:1
so has part: feature:40405-40878:1:exon

WP_016737389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40405-40878:1:exon

AMC88_RS25450
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25450
old locus tag: AMC88_PC00036
so part of: sequence
location: complement(41038..41859)
location: region:41038-41859:-1
so has part: feature:41038-41859:-1:exon
subclass of: SO_0000010

45960375
type: Gene
SIO_000068: ncbigene

position:41038:-1
position: 41038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41859:-1
position: 41859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41038-41859:-1:exon

AMC88_RS25450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25450
old locus tag: AMC88_PC00036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011651494.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MKPQFHLPLSTYPDASSFAIIDNAIGLARQNDAHLVASIPQVRIPQVHPPFPTVIDVETWRGQAERYSRDSGTSLRGHIADAISETGFEVRIHGFEVREPFVYERFSEIAKCYDLSIVEASELSRQLSETLLFGSGRPLVLFPATSVYSRVDTIAVAWDGSATAARALSSARVFIERAIKVQVISITDDKEIDEANRALLISSLKHSGLDVDDVSIQAGGETATGAIQSAALERKADLLVAGGFGHSRLREFILGGVTRELLVKAELLVLLAH
SIO_010081: AMC88_RS25450
subclass of: SO_0000673
so part of: AMC88_RS25450
location: complement(41038..41859)
location: region:41038-41859:-1
so has part: feature:41038-41859:-1:exon

WP_008534144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41038-41859:-1:exon

AMC88_RS25455
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25455
old locus tag: AMC88_PC00037
pseudo: true
so part of: sequence
location: 41989..42444
location: region:41989-42444:1
so has part: feature:41989-42444:1:exon
subclass of: SO_0000010

45960376
type: Gene
SIO_000068: ncbigene

position:41989:1
position: 41989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42444:1
position: 42444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41989-42444:1:exon

AMC88_RS25455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25455
old locus tag: AMC88_PC00037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011651495.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: pyridoxamine 5'-phosphate oxidase family protein
SIO_010081: AMC88_RS25455
subclass of: SO_0000673
so part of: AMC88_RS25455
location: 41989..42444
location: region:41989-42444:1
so has part: feature:41989-42444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41989-42444:1:exon

AMC88_RS34145
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34145
pseudo: true
so part of: sequence
location: complement(<42595..>42723)
location: region:42595-42723:-1
so has part: feature:42595-42723:-1:exon
subclass of: SO_0000010

70363063
type: Gene
SIO_000068: ncbigene

position:42595:-1
position: 42595
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:42723:-1
position: 42723
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42595-42723:-1:exon

AMC88_RS34145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017244946.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: alcohol dehydrogenase
SIO_010081: AMC88_RS34145
subclass of: SO_0000673
so part of: AMC88_RS34145
location: complement(<42595..>42723)
location: region:42595-42723:-1
so has part: feature:42595-42723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42595-42723:-1:exon

AMC88_RS25460
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25460
old locus tag: AMC88_PC00038
pseudo: true
so part of: sequence
location: <42752..42994
location: region:42752-42994:1
so has part: feature:42752-42994:1:exon
subclass of: SO_0000010

45960377
type: Gene
SIO_000068: ncbigene

position:42752:1
position: 42752
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:42994:1
position: 42994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42752-42994:1:exon

AMC88_RS25460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25460
old locus tag: AMC88_PC00038
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008505193.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: alcohol dehydrogenase
SIO_010081: AMC88_RS25460
subclass of: SO_0000673
so part of: AMC88_RS25460
location: <42752..42994
location: region:42752-42994:1
so has part: feature:42752-42994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42752-42994:1:exon

AMC88_RS25465
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25465
old locus tag: AMC88_PC00039
so part of: sequence
location: 43103..44458
location: region:43103-44458:1
so has part: feature:43103-44458:1:exon
subclass of: SO_0000010

45960378
type: Gene
SIO_000068: ncbigene

position:43103:1
position: 43103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44458:1
position: 44458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43103-44458:1:exon

AMC88_RS25465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25465
old locus tag: AMC88_PC00039
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053299.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trypsin-like peptidase domain-containing protein
translation: MSRSLLALAALFIAGESLLSAPAVADSLSLAPMLQRVVPSVVSISVQGRELDDADATLADPFYRKFFGLPDDAAPAEHSFQSAGSGVVIDEVHGYIVTNQHVIASASKIEVALSDGRRFQAKLVGADPETDVAVVQIPPDHLVQAEFGSASSLHVGDVVVAIGNPFGLGQTATMGIVSALGRRAVGSEGYEGFIQTDASTNPGNSGGALVSEDGVVVGINSAIIGPAGGSIGIGFAVPAETVGIVMRQLILTGKLVRGEVGILTQDLTPGLAKAFGVDEGAGALVSEVLPGSPAANAGIQPGDVIRMVDGRTVRGASDVRRLVGSLPLQSKPSFQIDRASRRIEAFPVVSDAPVAEPAASRTIHIARGPLADAEMANSPDGPGARVVVVAEGSVAAQAGLQPDDVIVALDQQPVTDVGQLLSILVKEHARALITVVRNGHRLFVAADVQTQ
SIO_010081: AMC88_RS25465
subclass of: SO_0000673
so part of: AMC88_RS25465
location: 43103..44458
location: region:43103-44458:1
so has part: feature:43103-44458:1:exon

WP_016737390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43103-44458:1:exon

AMC88_RS25470
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25470
old locus tag: AMC88_PC00040
so part of: sequence
location: 44582..45229
location: region:44582-45229:1
so has part: feature:44582-45229:1:exon
subclass of: SO_0000010

45960379
type: Gene
SIO_000068: ncbigene

position:44582:1
position: 44582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45229:1
position: 45229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44582-45229:1:exon

AMC88_RS25470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25470
old locus tag: AMC88_PC00040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020397608.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BON domain-containing protein
translation: MNDIQLRQNILDEMEFEPSIDAADIGVAVDSGIVTLTGHVRTYAEKEAAERVVSRVKGVRGIAADIEVRIFGPKETDDDDIARRAVKMLDWNVSVPKDSVQVRVLKGWITLRGEVEWQYQKNAAYDAVRDLAGVVGVSNLVELKPHITAVDVKKRIEDAFQRDAALEADAIRIDVQGRKVILSGKVKTWSERQAAERAAWSAPGISTLDDRLTVG
SIO_010081: AMC88_RS25470
subclass of: SO_0000673
so part of: AMC88_RS25470
location: 44582..45229
location: region:44582-45229:1
so has part: feature:44582-45229:1:exon

WP_012489422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44582-45229:1:exon

AMC88_RS25475
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25475
so part of: sequence
location: complement(45195..46073)
location: region:45195-46073:-1
so has part: feature:45195-46073:-1:exon
subclass of: SO_0000010

45960380
type: Gene
SIO_000068: ncbigene

position:45195:-1
position: 45195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46073:-1
position: 46073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45195-46073:-1:exon

AMC88_RS25475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004674359.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MVYGFAKQSAGHLQLYSELGEGTTVRLFLPRADAGKDSHPNEQRAEEAPPRGTETILVVEDDARVRRVTVSRLQTLAYFVIEATNGIDAVKELEAGHDVALLFSDVAMPGMNDDELARNVRERWPRVKILLTSGFSEPHAADKEIEAGAGWLKKPYTASEMSTRLRLLLATRPNSDSARQQDFNLEKSNPNLNRAAVAGTHIFLRGRSQPTSPPKVALQEHQWSPCARDGGSATGGAEFRSEDEICAQVDQGNWALCEGRSAAPLLLSVGRAVMSSQSRYSITRPSVGRREC
SIO_010081: AMC88_RS25475
subclass of: SO_0000673
so part of: AMC88_RS25475
location: complement(45195..46073)
location: region:45195-46073:-1
so has part: feature:45195-46073:-1:exon

WP_016737392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45195-46073:-1:exon

AMC88_RS33760
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33760
so part of: sequence
location: 46848..46985
location: region:46848-46985:1
so has part: feature:46848-46985:1:exon
subclass of: SO_0000010

45961808
type: Gene
SIO_000068: ncbigene

position:46848:1
position: 46848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46985:1
position: 46985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46848-46985:1:exon

AMC88_RS33760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33760
inference: COORDINATES: protein motif:HMM:NF020920.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPGLAEKVPDVTAALHAKLDEHRAFVRERGEDLPEIQNWRWARSS
SIO_010081: AMC88_RS33760
subclass of: SO_0000673
so part of: AMC88_RS33760
location: 46848..46985
location: region:46848-46985:1
so has part: feature:46848-46985:1:exon

WP_257784652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46848-46985:1:exon

AMC88_RS25480
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25480
old locus tag: AMC88_PC00042
so part of: sequence
location: complement(47206..48258)
location: region:47206-48258:-1
so has part: feature:47206-48258:-1:exon
subclass of: SO_0000010

45960381
type: Gene
SIO_000068: ncbigene

position:47206:-1
position: 47206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48258:-1
position: 48258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47206-48258:-1:exon

AMC88_RS25480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25480
old locus tag: AMC88_PC00042
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004674362.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III polyketide synthase
translation: MQQPVKLVSVGTAVPPHVIDQRDAARASHTAFSSRFGDFEKLARVFETSGIRRRYAVRPIEWYLETSGWPERNLAHIEGAGAMFVAAASKALVSAGIAAGDVDTIVTVSSTGIATPSLEARVSRELGFRDDVERVPVFGLGCAGGVSGLSIGSRLAASRPGSVVLVVAVETCTLAFRMDKLTKANIVATALFGDGAAACVVRASETGLAEVELAGQHTWPDTLDIMGWSVDPEGLGVIFDRAIPPFAETHVLKGVTSILARSDLAPADVDRFACHPGGSKVITALESALKLSQGTLDQEREVLSDYGNMSSPTALFVLEKLLAQGLPRRTVLTAMGPGFTLSCLSLTAAA
SIO_010081: AMC88_RS25480
subclass of: SO_0000673
so part of: AMC88_RS25480
location: complement(47206..48258)
location: region:47206-48258:-1
so has part: feature:47206-48258:-1:exon

WP_008534153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47206-48258:-1:exon

AMC88_RS25485
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25485
so part of: sequence
location: 48529..48738
location: region:48529-48738:1
so has part: feature:48529-48738:1:exon
subclass of: SO_0000010

45960382
type: Gene
SIO_000068: ncbigene

position:48529:1
position: 48529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48738:1
position: 48738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48529-48738:1:exon

AMC88_RS25485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534154.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CBS domain-containing protein
translation: MTTLDEGHNVREAVEIVNASKIGAVPVIDGEGRLTGIVTGETCCAGWRHPGRDGRYRIRATAKMHWRTM
SIO_010081: AMC88_RS25485
subclass of: SO_0000673
so part of: AMC88_RS25485
location: 48529..48738
location: region:48529-48738:1
so has part: feature:48529-48738:1:exon

WP_008534154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48529-48738:1:exon

AMC88_RS25490
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25490
old locus tag: AMC88_PC00043
so part of: sequence
location: 48893..49150
location: region:48893-49150:1
so has part: feature:48893-49150:1:exon
subclass of: SO_0000010

45960383
type: Gene
SIO_000068: ncbigene

position:48893:1
position: 48893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49150:1
position: 49150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48893-49150:1:exon

AMC88_RS25490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25490
old locus tag: AMC88_PC00043
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534156.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BON domain-containing protein
translation: MRALLDVRRQCTASGDEALGTAVRGRLETEFEIRFPIVNATVSDGAVTLRGEVETELECSAARVAAESIRGVGGVVNNITLDTAW
SIO_010081: AMC88_RS25490
subclass of: SO_0000673
so part of: AMC88_RS25490
location: 48893..49150
location: region:48893-49150:1
so has part: feature:48893-49150:1:exon

WP_008534156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48893-49150:1:exon

AMC88_RS33765
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33765
old locus tag: AMC88_PC00044
so part of: sequence
location: 49190..49333
location: region:49190-49333:1
so has part: feature:49190-49333:1:exon
subclass of: SO_0000010

45961809
type: Gene
SIO_000068: ncbigene

position:49190:1
position: 49190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49333:1
position: 49333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49190-49333:1:exon

AMC88_RS33765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33765
old locus tag: AMC88_PC00044
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010033181.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFVRVIADAVVSRLLLVILILMVGTVVSVLLVRPSDDSRTGRVERSL
SIO_010081: AMC88_RS33765
subclass of: SO_0000673
so part of: AMC88_RS33765
location: 49190..49333
location: region:49190-49333:1
so has part: feature:49190-49333:1:exon

WP_016737394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49190-49333:1:exon

AMC88_RS25500
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25500
pseudo: true
so part of: sequence
location: complement(<49932..50326)
location: region:49932-50326:-1
so has part: feature:49932-50326:-1:exon
subclass of: SO_0000010

45960385
type: Gene
SIO_000068: ncbigene

position:49932:-1
position: 49932
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:50326:-1
position: 50326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49932-50326:-1:exon

AMC88_RS25500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012330183.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AMC88_RS25500
subclass of: SO_0000673
so part of: AMC88_RS25500
location: complement(<49932..50326)
location: region:49932-50326:-1
so has part: feature:49932-50326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49932-50326:-1:exon

AMC88_RS32340
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32340
old locus tag: AMC88_PC00046
pseudo: true
so part of: sequence
location: complement(<50505..50829)
location: region:50505-50829:-1
so has part: feature:50505-50829:-1:exon
subclass of: SO_0000010

45961636
type: Gene
SIO_000068: ncbigene

position:50505:-1
position: 50505
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:50829:-1
position: 50829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50505-50829:-1:exon

AMC88_RS32340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32340
old locus tag: AMC88_PC00046
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018328800.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: xanthine dehydrogenase family protein molybdopterin-binding subunit
SIO_010081: AMC88_RS32340
subclass of: SO_0000673
so part of: AMC88_RS32340
location: complement(<50505..50829)
location: region:50505-50829:-1
so has part: feature:50505-50829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50505-50829:-1:exon

AMC88_RS25510
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25510
old locus tag: AMC88_PC00047
so part of: sequence
location: complement(50826..51587)
location: region:50826-51587:-1
so has part: feature:50826-51587:-1:exon
subclass of: SO_0000010

45960386
type: Gene
SIO_000068: ncbigene

position:50826:-1
position: 50826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51587:-1
position: 51587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50826-51587:-1:exon

AMC88_RS25510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25510
old locus tag: AMC88_PC00047
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004674371.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acyl homoserine lactonase family protein
translation: MKMHFLEAGRLRMRRSIYVPGALKEEAIELPVHATLMRHPQGNALFDSGCNPEAAIDPGARWGGLSKVMTPIFSPERTVVHQLKTLALDPEDIDVVICSHLHPDHCGCNAYFRRATILCHEAEAQAATASGAENQGYLRGEWDQPQGFQTFNAEHDVFGDGRIVLLPMPGHTPGMTVARVELEKDGSFILASDAAPLQASVDTGIAPRNTWNIELAAEALARLKALRERGASIIFGHDDAQWQELRKGVEFYE
SIO_010081: AMC88_RS25510
subclass of: SO_0000673
so part of: AMC88_RS25510
location: complement(50826..51587)
location: region:50826-51587:-1
so has part: feature:50826-51587:-1:exon

WP_004674371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50826-51587:-1:exon

AMC88_RS25515
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25515
so part of: sequence
location: complement(51589..51867)
location: region:51589-51867:-1
so has part: feature:51589-51867:-1:exon
subclass of: SO_0000010

45960387
type: Gene
SIO_000068: ncbigene

position:51589:-1
position: 51589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51867:-1
position: 51867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51589-51867:-1:exon

AMC88_RS25515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25515
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534159.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2Fe-2S iron-sulfur cluster-binding protein
translation: MLAVQADGSEIETMAREASILGRIQEAFRQHHGLQCEFVGPVSSLAIIDLLRHHPLETDDKIREALSGNICRCTGYENIVNAVRELASKRGP
SIO_010081: AMC88_RS25515
subclass of: SO_0000673
so part of: AMC88_RS25515
location: complement(51589..51867)
location: region:51589-51867:-1
so has part: feature:51589-51867:-1:exon

WP_008534159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51589-51867:-1:exon

AMC88_RS34150
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34150
so part of: sequence
location: complement(52054..52203)
location: region:52054-52203:-1
so has part: feature:52054-52203:-1:exon
subclass of: SO_0000010

70363064
type: Gene
SIO_000068: ncbigene

position:52054:-1
position: 52054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52203:-1
position: 52203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52054-52203:-1:exon

AMC88_RS34150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34150
inference: COORDINATES: protein motif:HMM:NF015415.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADRLAGILTPNTDIHASADYRRHLSGVLAKRALRAAWSRANHERLQAR
SIO_010081: AMC88_RS34150
subclass of: SO_0000673
so part of: AMC88_RS34150
location: complement(52054..52203)
location: region:52054-52203:-1
so has part: feature:52054-52203:-1:exon

WP_237353190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52054-52203:-1:exon

AMC88_RS34155
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34155
pseudo: true
so part of: sequence
location: complement(<52472..52690)
location: region:52472-52690:-1
so has part: feature:52472-52690:-1:exon
subclass of: SO_0000010

70363065
type: Gene
SIO_000068: ncbigene

position:52472:-1
position: 52472
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:52690:-1
position: 52690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52472-52690:-1:exon

AMC88_RS34155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34155
inference: COORDINATES: protein motif:HMM:NF013134.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: FAD binding domain-containing protein
SIO_010081: AMC88_RS34155
subclass of: SO_0000673
so part of: AMC88_RS34155
location: complement(<52472..52690)
location: region:52472-52690:-1
so has part: feature:52472-52690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52472-52690:-1:exon

AMC88_RS34160
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34160
pseudo: true
so part of: sequence
location: complement(<52969..>53049)
location: region:52969-53049:-1
so has part: feature:52969-53049:-1:exon
subclass of: SO_0000010

70363066
type: Gene
SIO_000068: ncbigene

position:52969:-1
position: 52969
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:53049:-1
position: 53049
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52969-53049:-1:exon

AMC88_RS34160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611299.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase domain-containing protein
SIO_010081: AMC88_RS34160
subclass of: SO_0000673
so part of: AMC88_RS34160
location: complement(<52969..>53049)
location: region:52969-53049:-1
so has part: feature:52969-53049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52969-53049:-1:exon

AMC88_RS25520
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25520
old locus tag: AMC88_PC00049
so part of: sequence
location: 53259..53726
location: region:53259-53726:1
so has part: feature:53259-53726:1:exon
subclass of: SO_0000010

45960388
type: Gene
SIO_000068: ncbigene

position:53259:1
position: 53259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53726:1
position: 53726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53259-53726:1:exon

AMC88_RS25520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25520
old locus tag: AMC88_PC00049
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004674376.1
GO function: GO:0009374 - biotin binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: avidin/streptavidin family protein
translation: MIRTNAVAALVFAVATSALAFDASNFKDFSSIASASSSWQNQSGSTMIIQVDSFGNVSGQYVNRAQGTGCQNSPYPLTGRVNGTFIAFSVGWNNSTENCNSATGWTGYAQVNGNNTEIVTSWNLAYEGGSGPAIEQGQDTFQYVPTTENKSLLKD
SIO_010081: AMC88_RS25520
subclass of: SO_0000673
so part of: AMC88_RS25520
location: 53259..53726
location: region:53259-53726:1
so has part: feature:53259-53726:1:exon

WP_004674376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53259-53726:1:exon

AMC88_RS34530
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: tnpB
locus tag: AMC88_RS34530
pseudo: true
so part of: sequence
location: <53944..54171
location: region:53944-54171:1
so has part: feature:53944-54171:1:exon
subclass of: SO_0000010

74309079
type: Gene
SIO_000068: ncbigene

position:53944:1
position: 53944
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:54171:1
position: 54171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53944-54171:1:exon

AMC88_RS34530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: tnpB
locus tag: AMC88_RS34530
inference: COORDINATES: protein motif:HMM:NF017528.2
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
SIO_010081: AMC88_RS34530
subclass of: SO_0000673
so part of: AMC88_RS34530
location: <53944..54171
location: region:53944-54171:1
so has part: feature:53944-54171:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53944-54171:1:exon

AMC88_RS25525
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25525
so part of: sequence
location: 54498..54785
location: region:54498-54785:1
so has part: feature:54498-54785:1:exon
subclass of: SO_0000010

45960389
type: Gene
SIO_000068: ncbigene

position:54498:1
position: 54498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54785:1
position: 54785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54498-54785:1:exon

AMC88_RS25525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534161.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSAVQLAARLDIPVNWIYVQIRRKRLLIDQQSTGAYLFQNSPAVVNAVRDLRNRTIHQLDLRIIQPHQEGHQHALSLEGIDWRARQETWRPSRV
SIO_010081: AMC88_RS25525
subclass of: SO_0000673
so part of: AMC88_RS25525
location: 54498..54785
location: region:54498-54785:1
so has part: feature:54498-54785:1:exon

WP_008534161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54498-54785:1:exon

AMC88_RS32360
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32360
old locus tag: AMC88_PC00050
pseudo: true
so part of: sequence
location: 54833..>55500
location: region:54833-55500:1
so has part: feature:54833-55500:1:exon
subclass of: SO_0000010

45961640
type: Gene
SIO_000068: ncbigene

position:54833:1
position: 54833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55500:1
position: 55500
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54833-55500:1:exon

AMC88_RS32360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32360
old locus tag: AMC88_PC00050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875348.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family transposase zinc-finger binding domain-containing protein
SIO_010081: AMC88_RS32360
subclass of: SO_0000673
so part of: AMC88_RS32360
location: 54833..>55500
location: region:54833-55500:1
so has part: feature:54833-55500:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54833-55500:1:exon

AMC88_RS25535
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25535
old locus tag: AMC88_PC00051
so part of: sequence
location: complement(55578..55970)
location: region:55578-55970:-1
so has part: feature:55578-55970:-1:exon
subclass of: SO_0000010

45960390
type: Gene
SIO_000068: ncbigene

position:55578:-1
position: 55578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55970:-1
position: 55970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55578-55970:-1:exon

AMC88_RS25535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25535
old locus tag: AMC88_PC00051
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003532611.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFTGTWSYRSLINNPDLSVDFNALEFGQGTLVLTELARRKVGGTIGGPGWSLELTGTVRPGDPVELQFTGKGDVAGETWIYSYRGYIVPNWPNGVDQRDAIVGSIVRDVPHSHGVAAAGYVASWYAVRQ
SIO_010081: AMC88_RS25535
subclass of: SO_0000673
so part of: AMC88_RS25535
location: complement(55578..55970)
location: region:55578-55970:-1
so has part: feature:55578-55970:-1:exon

WP_004674379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55578-55970:-1:exon

AMC88_RS25540
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25540
old locus tag: AMC88_PC00052
so part of: sequence
location: complement(55997..57946)
location: region:55997-57946:-1
so has part: feature:55997-57946:-1:exon
subclass of: SO_0000010

45960391
type: Gene
SIO_000068: ncbigene

position:55997:-1
position: 55997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57946:-1
position: 57946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55997-57946:-1:exon

AMC88_RS25540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25540
old locus tag: AMC88_PC00052
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011971066.1
GO function: GO:0005507 - copper ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multicopper oxidase domain-containing protein
translation: MSVSDKIAIFGMASVFSVTHALFAVAQEARAVTNPLAYMLQPITKSQGMLKTFEQSRETFPGEVLLDMNATYLDRQIYNPATARYDHVKLRGYQDARQTGLSGADTPLVGPTIDLRPGQTVRVTLHNLFPQDSTCGIGGGSANTPHCFNGTNLHSHGLWVNPSGNGDNVLISIRPGVSFQYEYNIAVEHPAGTFWYHPHLHGSTALQVSSGMSGALIIRGDRMPTPTETGDIDRLLKQPGGSDIAERVLVLQQIQYACTDNNGDITYDCQPGQVGGIESYDQFGPGSWPASGRFTSVNGQVLGQLASAEAGSVERWRMIHAGVRDTINFEIRRKTGTTAFRTLAAADTDRWIDQNCGKDTIPYGVVAQDGLTMAQVQMRQQAILQPGYRVDALVVLPGAGDYCIIDGAAPAAASVNQEAPSRRLLGIVTAVGGHAVNGEIGTYLQDWLISAAERTMSQNVAGKVIDDLKNEMSLSSFIPHPDIDAGEVTGEQQLVFNIDVKQPGATFFEVDGKPYDPNRIDRTLPLSGVDEWTLRSDFVSHPFHIHVNPFQIIKIVDAAGNDVSALGADDDGDPQYPGLKNVWKDTLWIKNPGTDPSARYTITVRTHYQRYIGEFVLHCHILDHEDQGMMQNIRITLPDGQGGTVSGHH
SIO_010081: AMC88_RS25540
subclass of: SO_0000673
so part of: AMC88_RS25540
location: complement(55997..57946)
location: region:55997-57946:-1
so has part: feature:55997-57946:-1:exon

WP_016737399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55997-57946:-1:exon

AMC88_RS34535
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34535
so part of: sequence
location: complement(58427..58549)
location: region:58427-58549:-1
so has part: feature:58427-58549:-1:exon
subclass of: SO_0000010

74309080
type: Gene
SIO_000068: ncbigene

position:58427:-1
position: 58427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58549:-1
position: 58549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58427-58549:-1:exon

AMC88_RS34535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34535
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEGLPPAVVEMIVEEQGAILLSKQPCFEIIAQRREPEELA
SIO_010081: AMC88_RS34535
subclass of: SO_0000673
so part of: AMC88_RS34535
location: complement(58427..58549)
location: region:58427-58549:-1
so has part: feature:58427-58549:-1:exon

WP_009982859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58427-58549:-1:exon

AMC88_RS25545
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25545
old locus tag: AMC88_PC00053
so part of: sequence
location: complement(58572..59297)
location: region:58572-59297:-1
so has part: feature:58572-59297:-1:exon
subclass of: SO_0000010

45960392
type: Gene
SIO_000068: ncbigene

position:58572:-1
position: 58572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59297:-1
position: 59297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58572-59297:-1:exon

AMC88_RS25545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25545
old locus tag: AMC88_PC00053
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004129756.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RibD family protein
translation: MFVEESNPMPRPYVICHMMSPLDGRLIVNDWAEATGHSVDELVKIYDGLHEKIGADAWLSGRATGEEFADAVDRPYQATGTAARPIHIANPDAGEFAVIVDKDGRLRWDKSDIDGAHLVVLTGSDVDDAYLAGLTQAGVSYIVSEKDGVDLKNALDLLGTEFGVKRLMLEGGAQTNGHFLKAGLVDEVSLVIFPAIGGKSNTPAIFEGGEDGLAGRARLTFISAEAAGLGSVHLRYRVGRP
SIO_010081: AMC88_RS25545
subclass of: SO_0000673
so part of: AMC88_RS25545
location: complement(58572..59297)
location: region:58572-59297:-1
so has part: feature:58572-59297:-1:exon

WP_225884158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58572-59297:-1:exon

AMC88_RS25550
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25550
old locus tag: AMC88_PC00054
so part of: sequence
location: complement(59305..60156)
location: region:59305-60156:-1
so has part: feature:59305-60156:-1:exon
subclass of: SO_0000010

45960393
type: Gene
SIO_000068: ncbigene

position:59305:-1
position: 59305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60156:-1
position: 60156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59305-60156:-1:exon

AMC88_RS25550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25550
old locus tag: AMC88_PC00054
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MSERMNSVVAPGRVAVITGAAKGIGLAIARALAARGMKLALLDLDADALEDVTSTLDTDILIVSGDVSDLSALTRLRDETISRFGDVAVLVNNAGITQGAGPWDNPAKWRRQIDVNFRGVQAAQHVFVPYMIEAGRQSAVVNLGSKEGITTPPGNAAYSVAKAAVKVLTEQLSHELLKETGGRVSAHLLVPGYTWTPMNIALKPQGIAKPDEAWTAEQLVEYFLVRLLDENFYIICPDNAVTSAIDARRIRWAADDMILNRPALSRWHPDWMDKFAAWLKAGH
SIO_010081: AMC88_RS25550
subclass of: SO_0000673
so part of: AMC88_RS25550
location: complement(59305..60156)
location: region:59305-60156:-1
so has part: feature:59305-60156:-1:exon

WP_008534165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59305-60156:-1:exon

AMC88_RS25555
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25555
pseudo: true
so part of: sequence
location: 60624..61401
location: region:60624-61401:1
so has part: feature:60624-61401:1:exon
subclass of: SO_0000010

45960394
type: Gene
SIO_000068: ncbigene

position:60624:1
position: 60624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61401:1
position: 61401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60624-61401:1:exon

AMC88_RS25555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489432.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
SIO_010081: AMC88_RS25555
subclass of: SO_0000673
so part of: AMC88_RS25555
location: 60624..61401
location: region:60624-61401:1
so has part: feature:60624-61401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60624-61401:1:exon

AMC88_RS25560
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25560
old locus tag: AMC88_PC00057
pseudo: true
so part of: sequence
location: 61413..62155
location: region:61413-62155:1
so has part: feature:61413-62155:1:exon
subclass of: SO_0000010

45960395
type: Gene
SIO_000068: ncbigene

position:61413:1
position: 61413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62155:1
position: 62155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61413-62155:1:exon

AMC88_RS25560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25560
old locus tag: AMC88_PC00057
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018328855.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SDR family oxidoreductase
SIO_010081: AMC88_RS25560
subclass of: SO_0000673
so part of: AMC88_RS25560
location: 61413..62155
location: region:61413-62155:1
so has part: feature:61413-62155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61413-62155:1:exon

AMC88_RS25565
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25565
old locus tag: AMC88_PC00058
so part of: sequence
location: 62492..63397
location: region:62492-63397:1
so has part: feature:62492-63397:1:exon
subclass of: SO_0000010

45960396
type: Gene
SIO_000068: ncbigene

position:62492:1
position: 62492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63397:1
position: 63397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62492-63397:1:exon

AMC88_RS25565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25565
old locus tag: AMC88_PC00058
inference: COORDINATES: protein motif:HMM:NF015431.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MVSTRADLADLETFVAIARAGGFRKAAALRGVSGSALSHSIRGLEARLGVRLFHRTSRSISLTAAGEVLLAELEPRFLGIQAAMDLLDSFRSGPTGRVRVTTLRDAAELLIAPRLHSFRKSYPDVEVEVSVEDRFIDMVAEGFDAGIRYGGTVPEGMIASRLTSELEWIVVGSPAYLNERGRPARPEDLLTHECIRIRTGTDHLCKWELGDGDRMVSLDVPGLLTLGDSELSIRMAEEGGGLFYCLQARVEDKLAAGSLEVVLPDWTSTGPGFHAYYVSHRQVPSALRTFLDYLKAPVAGD
SIO_010081: AMC88_RS25565
subclass of: SO_0000673
so part of: AMC88_RS25565
location: 62492..63397
location: region:62492-63397:1
so has part: feature:62492-63397:1:exon

WP_004674388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62492-63397:1:exon

AMC88_RS25570
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25570
old locus tag: AMC88_PC00059
so part of: sequence
location: 63685..64551
location: region:63685-64551:1
so has part: feature:63685-64551:1:exon
subclass of: SO_0000010

45960397
type: Gene
SIO_000068: ncbigene

position:63685:1
position: 63685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64551:1
position: 64551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63685-64551:1:exon

AMC88_RS25570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25570
old locus tag: AMC88_PC00059
inference: COORDINATES: protein motif:HMM:NF033564.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISAs1 family transposase
translation: MPLPYGIAGHGTFSTVFRCLNQVAFEAALPKPLQRAWKAWWRSTARRYEAPPLPLVKVWAAGCGLVIGQQTAPGRNEVQGALDALALLSLEGAIVTADALHCRADTAHAILSAGGDYALALKANQPGLLAQTIARLDDVEPLGVQTAAENDHDRCERRRACIVAVNDIDFPGLQAIGSVEATSRHADGRLTSHVRYFLLSTIMSAAALIEVTRTHWQIENKLHWVLDVQFREDAARNRKDHGPANIALLRKIALNLIRAHPDKASIRRKIKNAGWDDQFLISIIAHMR
SIO_010081: AMC88_RS25570
subclass of: SO_0000673
so part of: AMC88_RS25570
location: 63685..64551
location: region:63685-64551:1
so has part: feature:63685-64551:1:exon

WP_237353186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63685-64551:1:exon

AMC88_RS25580
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25580
old locus tag: AMC88_PC00060
so part of: sequence
location: 65610..68054
location: region:65610-68054:1
so has part: feature:65610-68054:1:exon
subclass of: SO_0000010

45960398
type: Gene
SIO_000068: ncbigene

position:65610:1
position: 65610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68054:1
position: 68054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65610-68054:1:exon

AMC88_RS25580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25580
old locus tag: AMC88_PC00060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489435.1
GO function: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 3 C-terminal domain-containing protein
translation: MIDKKALLDNMTLAEQVSLLSGDTFWSLPPIDRLGIGRLRLTDGPNGARGAGSFVGGVTAAAFPVGIAIGASWNPDLAKEIGSALGDEVLSKGAHVSLAPTVNIQRSVTNGRNFECFSEDPILTAELAVGYIEGLQSTKVGATIKHFVGNESEIERTTISSDIDERTLREVYLIPFETAVKRAKVWAVMSSYNKLNGTYTAESHWLLNEVLRGDWGFNGVVMSDWFGSRSTAPTVNAGLDLEMPGPTRDRGSKLLAAVEGGEVSVETIRACVRNILTLMERTGAINDHREFKEYAIDRPEHRALIRRAGAESAVLLQNDGVLPLAQQGMVAIIGPNAKVAQVMGGGSAQLNPHYVISPWQGLVDALGEENLCYAQGCNNYRFQPLIENPTTFEFFQGRELAGEPVKVVEEPSSLGVWLPPVAEGFVDPLRFSARMRTIFTASEAGIYRVGLTSAGLGRVYVDGRLVVDAWASWIRGTTFFEEGCEEVVGEITLEAGRTYEVVAEYARHDHVNLYIAAIRVGIGRFSAEAEIAEAAAVAAKADHAVVFVGRTGDWDTEGSDLRGIALPGLQNQLVEAVIAANPNTIVVLQTGGPVEMPWLSGARAVLQCWYPGQEAGNAIADVLLGKAEPSGRLAQTFPVRWADNPTHTEDDAVYPGKDGHVRYDEGVFVGYRHYDRHGIKPLFPFGHGLGYSSFAMSDLTVGLPDAAGAVTVTLELTNISERPGSAVVQIYVGDVEASIPRPVKELKAFSKIALEPGEKRRLRFILDARTFAFFDTTERRWRIEAGEFAVMAGFSATDIRLSLTVTQKGAVLAL
SIO_010081: AMC88_RS25580
subclass of: SO_0000673
so part of: AMC88_RS25580
location: 65610..68054
location: region:65610-68054:1
so has part: feature:65610-68054:1:exon

WP_016737400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65610-68054:1:exon

AMC88_RS25585
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: istA
locus tag: AMC88_RS25585
old locus tag: AMC88_PC00061
pseudo: true
so part of: sequence
location: 68508..>70001
location: region:68508-70001:1
so has part: feature:68508-70001:1:exon
subclass of: SO_0000010

45960399
type: Gene
SIO_000068: ncbigene

position:68508:1
position: 68508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70001:1
position: 70001
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68508-70001:1:exon

AMC88_RS25585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: istA
locus tag: AMC88_RS25585
old locus tag: AMC88_PC00061
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006200010.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: AMC88_RS25585
subclass of: SO_0000673
so part of: AMC88_RS25585
location: 68508..>70001
location: region:68508-70001:1
so has part: feature:68508-70001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68508-70001:1:exon

AMC88_RS25590
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: istB
locus tag: AMC88_RS25590
old locus tag: AMC88_PC00062
so part of: sequence
location: 70007..70741
location: region:70007-70741:1
so has part: feature:70007-70741:1:exon
subclass of: SO_0000010

45960400
type: Gene
SIO_000068: ncbigene

position:70007:1
position: 70007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70741:1
position: 70741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70007-70741:1:exon

AMC88_RS25590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: istB
locus tag: AMC88_RS25590
old locus tag: AMC88_PC00062
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330531.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MERTQVLELMSTLKLYGMRGAYDEVMGNGIKRQHEPPRIVGDLLQSEIAEKQARSIRYQLSIAKLPLAKDIDDFDFADTPVNEPLVRELSTGTFVADQRNVVLVGGTGTGKSHLAIAIARALIRNGTRGRFFNVVDLVNRLETETRSGKQGRTADYLNRLDFIILDELGYLPFAQAGGQLLFHLISRLYERTSIIVTTNLAFGEWPTVFGDAKMTTALLDRLTHHCEIVETGNESWRFKNRSQS
SIO_010081: AMC88_RS25590
subclass of: SO_0000673
so part of: AMC88_RS25590
location: 70007..70741
location: region:70007-70741:1
so has part: feature:70007-70741:1:exon

WP_064818141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70007-70741:1:exon

AMC88_RS25595
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25595
old locus tag: AMC88_PC00063
so part of: sequence
location: 71007..71240
location: region:71007-71240:1
so has part: feature:71007-71240:1:exon
subclass of: SO_0000010

45960401
type: Gene
SIO_000068: ncbigene

position:71007:1
position: 71007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71240:1
position: 71240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71007-71240:1:exon

AMC88_RS25595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25595
old locus tag: AMC88_PC00063
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018859771.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTHDKHFRMLSEAVQAWYRYYEVEPDDQASQTLCSAAIEFFNEGARSLEDVTTLLIGTYVGRWATRVNAPTSAAVH
SIO_010081: AMC88_RS25595
subclass of: SO_0000673
so part of: AMC88_RS25595
location: 71007..71240
location: region:71007-71240:1
so has part: feature:71007-71240:1:exon

WP_016737406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71007-71240:1:exon

AMC88_RS32370
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32370
pseudo: true
so part of: sequence
location: <71308..71875
location: region:71308-71875:1
so has part: feature:71308-71875:1:exon
subclass of: SO_0000010

45961641
type: Gene
SIO_000068: ncbigene

position:71308:1
position: 71308
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:71875:1
position: 71875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71308-71875:1:exon

AMC88_RS32370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018445491.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-dependent DNA ligase
SIO_010081: AMC88_RS32370
subclass of: SO_0000673
so part of: AMC88_RS32370
location: <71308..71875
location: region:71308-71875:1
so has part: feature:71308-71875:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71308-71875:1:exon

AMC88_RS33770
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33770
old locus tag: AMC88_PC00065
so part of: sequence
location: 73068..73304
location: region:73068-73304:1
so has part: feature:73068-73304:1:exon
subclass of: SO_0000010

45961810
type: Gene
SIO_000068: ncbigene

position:73068:1
position: 73068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73304:1
position: 73304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73068-73304:1:exon

AMC88_RS33770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33770
old locus tag: AMC88_PC00065
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDALDFSEEPYFSPETTRKVLKLRNAVWGMCFDYLGECGHLGKSTDLLRMDQDLEYVVEKLVIYHLSPQEIEEAEAE
SIO_010081: AMC88_RS33770
subclass of: SO_0000673
so part of: AMC88_RS33770
location: 73068..73304
location: region:73068-73304:1
so has part: feature:73068-73304:1:exon

WP_158464442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73068-73304:1:exon

AMC88_RS25610
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25610
old locus tag: AMC88_PC00066
so part of: sequence
location: complement(73382..74398)
location: region:73382-74398:-1
so has part: feature:73382-74398:-1:exon
subclass of: SO_0000010

45960402
type: Gene
SIO_000068: ncbigene

position:73382:-1
position: 73382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74398:-1
position: 74398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73382-74398:-1:exon

AMC88_RS25610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25610
old locus tag: AMC88_PC00066
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489446.1
GO function: GO:0004673 - protein histidine kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HWE histidine kinase domain-containing protein
translation: MNPISTSSRARERFLEAILQSAIEYAIIALDLDSRVITWNEGARRILGWDETEIVGHPVAVIFTEEDRAAGIPQREMTAALTQGHGDDERWHLRKDGSLFWASGQMMALRSDDGELEGFVKILRDRTEQRENEERQRVLMHELSHRIKNTLAVVQAITNQSFRNAASIEAAEQSISSRIKAYANAHDILLQKNWLSAAVDTIIEATAVNLGVEPSRIKASGPAVSLNPQAALGFALVLHELVTNATKYGALSGDTGTVEIEWSVRKNVGDDRFNLHWQESGGPAVEAPKKKGFGSRLVNTSLSAFGDVSFDYAATGFKLDLEASLQKLQYQNCPDLEV
SIO_010081: AMC88_RS25610
subclass of: SO_0000673
so part of: AMC88_RS25610
location: complement(73382..74398)
location: region:73382-74398:-1
so has part: feature:73382-74398:-1:exon

WP_029532363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73382-74398:-1:exon

AMC88_RS33310
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33310
pseudo: true
so part of: sequence
location: 74602..>75139
location: region:74602-75139:1
so has part: feature:74602-75139:1:exon
subclass of: SO_0000010

45961733
type: Gene
SIO_000068: ncbigene

position:74602:1
position: 74602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75139:1
position: 75139
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74602-75139:1:exon

AMC88_RS33310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018327555.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: PAS domain-containing protein
SIO_010081: AMC88_RS33310
subclass of: SO_0000673
so part of: AMC88_RS33310
location: 74602..>75139
location: region:74602-75139:1
so has part: feature:74602-75139:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74602-75139:1:exon

AMC88_RS25615
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25615
old locus tag: AMC88_PC00067
pseudo: true
so part of: sequence
location: complement(75117..>76077)
location: region:75117-76077:-1
so has part: feature:75117-76077:-1:exon
subclass of: SO_0000010

45960403
type: Gene
SIO_000068: ncbigene

position:75117:-1
position: 75117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76077:-1
position: 76077
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75117-76077:-1:exon

AMC88_RS25615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25615
old locus tag: AMC88_PC00067
inference: COORDINATES: similar to AA sequence:RefSeq:WP_027033250.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ISNCY family transposase
SIO_010081: AMC88_RS25615
subclass of: SO_0000673
so part of: AMC88_RS25615
location: complement(75117..>76077)
location: region:75117-76077:-1
so has part: feature:75117-76077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:75117-76077:-1:exon

AMC88_RS25620
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25620
old locus tag: AMC88_PC00068
so part of: sequence
location: complement(76318..77304)
location: region:76318-77304:-1
so has part: feature:76318-77304:-1:exon
subclass of: SO_0000010

45960404
type: Gene
SIO_000068: ncbigene

position:76318:-1
position: 76318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77304:-1
position: 77304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76318-77304:-1:exon

AMC88_RS25620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25620
old locus tag: AMC88_PC00068
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534187.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRSRLNLLLATGLVILAPMLSGSTPARAAGKSSPFPAWIADYVGDGKGQITRVVLERARRLYLEKVAEGTVKNACYFAMDATRPNDLTVGRFYVICEAKQSFRVISAGHGGGLNLPGVVNFSNGRECAKNFGNALDSNLTAGAYLTSEIKTSFKGYYLAPSNREAVLTRSFVQFDGIGDTANARQRAIGGHAAALVSGICMQKKPESPYADRKGYVPVGKLVTYAGGRSDGCTSWSPEETPEVLSMVKDNPTTLYIYPEARDIAAVGRATTSGKSPVSAGSYWNATCLGEIGSPQFWPKERLEPIIARYKQDHPAPPPRPIPLCQASN
SIO_010081: AMC88_RS25620
subclass of: SO_0000673
so part of: AMC88_RS25620
location: complement(76318..77304)
location: region:76318-77304:-1
so has part: feature:76318-77304:-1:exon

WP_064820003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76318-77304:-1:exon

AMC88_RS25625
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25625
old locus tag: AMC88_PC00069
so part of: sequence
location: complement(77406..78065)
location: region:77406-78065:-1
so has part: feature:77406-78065:-1:exon
subclass of: SO_0000010

45960405
type: Gene
SIO_000068: ncbigene

position:77406:-1
position: 77406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78065:-1
position: 78065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77406-78065:-1:exon

AMC88_RS25625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25625
old locus tag: AMC88_PC00069
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489448.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1007 family protein
translation: MSLANKRRHATMAISLLLLGMPTNTFAHPHIFVDAKFEAVAAPDGSLQELRDTWQFDEVFSSSVLLDYDKNRNNALDPAEVAAVAKTVRESLAQYNYYMNITINGKTLALAKPDILHGTYENGSLTLSFAQKPMAKTPLKGLIVFGVYDPTLYTALDFASDADLKISGEGFSGCTHKVVRPGSKEILSENQAMLTTMFFNDPVGTDYSQIVATRLEVRC
SIO_010081: AMC88_RS25625
subclass of: SO_0000673
so part of: AMC88_RS25625
location: complement(77406..78065)
location: region:77406-78065:-1
so has part: feature:77406-78065:-1:exon

WP_016737409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77406-78065:-1:exon

AMC88_RS33915
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33915
pseudo: true
so part of: sequence
location: complement(78797..79764)
location: region:78797-79764:-1
so has part: feature:78797-79764:-1:exon
subclass of: SO_0000010

63509605
type: Gene
SIO_000068: ncbigene

position:78797:-1
position: 78797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79764:-1
position: 79764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78797-79764:-1:exon

AMC88_RS33915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017271521.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nucleotidyl transferase AbiEii/AbiGii toxin family protein
SIO_010081: AMC88_RS33915
subclass of: SO_0000673
so part of: AMC88_RS33915
location: complement(78797..79764)
location: region:78797-79764:-1
so has part: feature:78797-79764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78797-79764:-1:exon

AMC88_RS25645
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25645
old locus tag: AMC88_PC00072
so part of: sequence
location: complement(79804..80373)
location: region:79804-80373:-1
so has part: feature:79804-80373:-1:exon
subclass of: SO_0000010

45960408
type: Gene
SIO_000068: ncbigene

position:79804:-1
position: 79804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80373:-1
position: 80373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79804-80373:-1:exon

AMC88_RS25645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25645
old locus tag: AMC88_PC00072
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489450.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6088 family protein
translation: MGHAERLPEGSALSAKSFLHLGNRAALDQALSRLAERGELVRAGRGIYMRPVKSRFGSRPPTVEQAVEAVAQQRGEVIVSNGAAAANALGLTSQVPVRSVYLTSGRSRTMTLGQQTVELKHVPRWQLALADRPAGVAVRALAWLGPERADEALSRIKRKLPPEAFGELVAAAPQFPTWLARSVGRAAHR
SIO_010081: AMC88_RS25645
subclass of: SO_0000673
so part of: AMC88_RS25645
location: complement(79804..80373)
location: region:79804-80373:-1
so has part: feature:79804-80373:-1:exon

WP_225884183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79804-80373:-1:exon

AMC88_RS25650
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25650
old locus tag: AMC88_PC00073
so part of: sequence
location: complement(80519..80728)
location: region:80519-80728:-1
so has part: feature:80519-80728:-1:exon
subclass of: SO_0000010

45960409
type: Gene
SIO_000068: ncbigene

position:80519:-1
position: 80519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80728:-1
position: 80728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80519-80728:-1:exon

AMC88_RS25650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25650
old locus tag: AMC88_PC00073
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004672578.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: METVEISSRSDFGLWAIERAREIITSEGTAFAMAARDMDDEALANAAAALGKAISDAMVEVFDGLIDES
SIO_010081: AMC88_RS25650
subclass of: SO_0000673
so part of: AMC88_RS25650
location: complement(80519..80728)
location: region:80519-80728:-1
so has part: feature:80519-80728:-1:exon

WP_064820004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80519-80728:-1:exon

AMC88_RS25655
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25655
old locus tag: AMC88_PC00074
so part of: sequence
location: 81050..83659
location: region:81050-83659:1
so has part: feature:81050-83659:1:exon
subclass of: SO_0000010

45960410
type: Gene
SIO_000068: ncbigene

position:81050:1
position: 81050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83659:1
position: 83659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81050-83659:1:exon

AMC88_RS25655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25655
old locus tag: AMC88_PC00074
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053319.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLERVGSGSKEVETLVVDLGQKDVTGRSASTKTIDAGEIRKIAPSGNGQALDISAARGFVGFTQSKSGATAILVDAKVSTPETDPGNDLKIDLDGLKKVAASEFGSTVPNNITHLFNPTIEAMANQFYGGDSVEVRDRFKADVKALLGPLLDKVGAGEIGIGDLAGNLERLTSRLIAPGGKEVWGYRHAVQTALEGLVMSASLVSKMPANPDWDKNFSPLPSSNLASYSFNDVMAMIMVGTGLAGKEIAANGSGDGRFFAGSGGDAWIAERMFGTKDNGWSKTIQNLDLPYIDSDYLTSSLKKMDLVMSGSDAIEPVVERPIDENDILESKLLRGYAPSTAYEPTLKKLDELKYGILGDAVKDVSRDFVAPDNMDHLDQLTPEQKATLLYDLIEIKQQFNGYMNQYGDSVPDGERVGKDLDARIEKLTADPATQQHLSDIFASGMKEYLQRPANSDLLTNIEDAYLIDIGGGKAIDRALSAGKSFEDALKDYYSELNTLVDLLPQDYIDAHLDAANVTFSNVIKEHYIGDGQGVDLEPLLSGPDDTFVPGATNDAISQLANTFAEDFISKNGPADGGETLKQNLAQDIARDVDGVLRMMRGGMKLDDALASFKDSLDLPRQTRTPAGIDAEVYKAGLMHAVQMLTMSSVLVARGLGVGGKWTPADIAAAVGSATQIVGMTMEGLGKNLDVAGKPFSAFGNQPGSWGKGISMNFSPKTMEAAGKILGAAGGLAMAGLGFYSASRSMKAGDRAKGALEIIGGIAGTGNALIGFSEAMLYLTNAMSRAFSGLGTVAPEVVTIFSSAAKTGLAAAGLVTGLVASAVGLALGLWDMANGVKKLDKMEKQLNEKLERYTGESVHLEFGPDPSFIW
SIO_010081: AMC88_RS25655
subclass of: SO_0000673
so part of: AMC88_RS25655
location: 81050..83659
location: region:81050-83659:1
so has part: feature:81050-83659:1:exon

WP_064820005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81050-83659:1:exon

AMC88_RS34170
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34170
so part of: sequence
location: complement(83868..84158)
location: region:83868-84158:-1
so has part: feature:83868-84158:-1:exon
subclass of: SO_0000010

70363068
type: Gene
SIO_000068: ncbigene

position:83868:-1
position: 83868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84158:-1
position: 84158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83868-84158:-1:exon

AMC88_RS34170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGWIGAVGRDVPFDVAASETNFGLLVCADIEEKIVRAAVVVPSEAKGDAFLTVVLVVLPWLVEFSDFGSELAFSRRNETVSISEDAGAIDDMRSL
SIO_010081: AMC88_RS34170
subclass of: SO_0000673
so part of: AMC88_RS34170
location: complement(83868..84158)
location: region:83868-84158:-1
so has part: feature:83868-84158:-1:exon

WP_004672580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83868-84158:-1:exon

AMC88_RS25660
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25660
old locus tag: AMC88_PC00075
so part of: sequence
location: 84184..86724
location: region:84184-86724:1
so has part: feature:84184-86724:1:exon
subclass of: SO_0000010

45960411
type: Gene
SIO_000068: ncbigene

position:84184:1
position: 84184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86724:1
position: 86724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84184-86724:1:exon

AMC88_RS25660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25660
old locus tag: AMC88_PC00075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534228.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEINQGFMEGLKDKDKSFESIDVVKNPHNYTAEQKLIMYLDLLQTKATFGQYKDSLGDNQRGIYNDQEILKDLDKSIAILGSDPDVNSLMTEKALKAFKLIFSGYRVAPPDTNKDASEIINDTITRDEKMKDLRTKVEDAFERDIVNGGLLNDGLKSGKDVTTILKEYNAALGFYSMVLPDDFVKQRSAIADKTYAEFFDKNVLPTISDPTTALDGLIRMGLAGNKTERELKGLGSILPVMDFDQSLGLGGSLFPDLKIDLDGLKKVAASEFGSTVPNNITHLFNPTIQAMANQFYGSDSPEVRDQFKADVKALLGPLLDKVGAGEIGIGDLAGNLERLTSRLSAPGGKEVLGYRHAVQTALEGLVMGASLVSKLPANAEWDKSVSPLPSSNLASYSFNDVMAAIMIGTGLAGKGIAANGSDGGRFFAGSGGDAWIAERMFATKDNGWSKTIQSLDLPYIDSEYLTSSLKDMGLSMSGLMKTLMPGTDVIDPIIVDGKTAEEAIKKIIAPSLDALAETLFKGNADAMAQYKTNFTTIFTALWATMRPGGSVETIKADLAKLIDKTATAAPAGVDPVKYKAALSSGVMSVLTASRSIYAGLNMTSPTWDSIGIVVLHALGALAHMGSALGSAIKASNFSLLDGISSLVGVSDELARAQRSVLSAFFKNTGTTVGAVAGVAWLPVEYYQFLQGLTSGKGDPVDLIFMGIGTAADTVGAIEGIAGVANMLVNSTFLGRTGATVALVSGGFSLAFAVACAVSWAAWAGFAIYQSIKQEKAFHKQTDMMNDMLKRTVNDTVGIYAKTGPIVGAKGGVAPAPRDPEQRELTPENWDAIIADIEKRRGTAVG
SIO_010081: AMC88_RS25660
subclass of: SO_0000673
so part of: AMC88_RS25660
location: 84184..86724
location: region:84184-86724:1
so has part: feature:84184-86724:1:exon

WP_225884182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84184-86724:1:exon

AMC88_RS25665
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25665
old locus tag: AMC88_PC00076
so part of: sequence
location: 87030..87287
location: region:87030-87287:1
so has part: feature:87030-87287:1:exon
subclass of: SO_0000010

45960412
type: Gene
SIO_000068: ncbigene

position:87030:1
position: 87030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87287:1
position: 87287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87030-87287:1:exon

AMC88_RS25665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25665
old locus tag: AMC88_PC00076
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004672582.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVDSVNSDLNLALANPVSVELTTDKTGSKDTTGSTTKKVDPNSESEILSAAVDAFLPGMISNTLMLNNSLFNFAKEAIDEGSDE
SIO_010081: AMC88_RS25665
subclass of: SO_0000673
so part of: AMC88_RS25665
location: 87030..87287
location: region:87030-87287:1
so has part: feature:87030-87287:1:exon

WP_008534237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87030-87287:1:exon

AMC88_RS25670
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25670
old locus tag: AMC88_PC00077
so part of: sequence
location: 87338..87814
location: region:87338-87814:1
so has part: feature:87338-87814:1:exon
subclass of: SO_0000010

45960413
type: Gene
SIO_000068: ncbigene

position:87338:1
position: 87338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87814:1
position: 87814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87338-87814:1:exon

AMC88_RS25670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25670
old locus tag: AMC88_PC00077
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004672583.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGEELSGRAFTPPVDGVSTGNVLKTSEIVAERIGLQPADFAGLRPTELTSIPNTQGRKIAPESDAVPPSYSPEGNTRPSSILERLSAFFMPVAGSGQPETPLVRFAADKDHSGPKIEDITTSIDRLEKSQQFATGTTLLSSLTQSVMSSSKRLTQGQ
SIO_010081: AMC88_RS25670
subclass of: SO_0000673
so part of: AMC88_RS25670
location: 87338..87814
location: region:87338-87814:1
so has part: feature:87338-87814:1:exon

WP_064820006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87338-87814:1:exon

AMC88_RS25675
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: sctJ
locus tag: AMC88_RS25675
old locus tag: AMC88_PC00078
so part of: sequence
location: 87811..88641
location: region:87811-88641:1
so has part: feature:87811-88641:1:exon
subclass of: SO_0000010

45960414
type: Gene
SIO_000068: ncbigene

position:87811:1
position: 87811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88641:1
position: 88641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87811-88641:1:exon

AMC88_RS25675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: sctJ
locus tag: AMC88_RS25675
old locus tag: AMC88_PC00078
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018247139.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion inner membrane ring lipoprotein SctJ
translation: MNIMISSALARSSISSPARKVLPKAAMLALCLFLAACSQDVLTGLDQRDALDAQVLLERAGISVTMKSEKGGTYAIIAESADHARAIELLAGAGLPRQSFGNVAELFPGNGFLVTPYEQKARMSYAIEQQLAETLSGLDGVATARVHVVLPEENGRGLIKEKARAAAVLQYRPGANLNEIDMKSRSVLVNSIRDLSYEDVSVVVSPWSEVGAPAAPATAAAPAPAAPVTPAPAAAPFSMVQSALSAFKGPNLAVIGAIILAIGACLLLLLPQRKER
SIO_010081: AMC88_RS25675
subclass of: SO_0000673
so part of: AMC88_RS25675
location: 87811..88641
location: region:87811-88641:1
so has part: feature:87811-88641:1:exon

WP_046977177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87811-88641:1:exon

AMC88_RS25680
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25680
old locus tag: AMC88_PC00079
so part of: sequence
location: 88644..89273
location: region:88644-89273:1
so has part: feature:88644-89273:1:exon
subclass of: SO_0000010

45960415
type: Gene
SIO_000068: ncbigene

position:88644:1
position: 88644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89273:1
position: 89273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88644-89273:1:exon

AMC88_RS25680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25680
old locus tag: AMC88_PC00079
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053322.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTPRSDGEAISDAARIRRAALLSADMLPAARWDGTAPLLADGSTLSPRLYRRLFTEIAEAHGDPATFADGARRLISMDAGGRATAALRAGLAYHLAAFCPAVDRPTLARLKAVYGEEAVAFALGHINLSTATPPLDLLSEQARHVVEADGWSMLALLADEYRISAAWRWAGWRDMAENGSASLLKSPALVLATAAVDEVASIQEGAGR
SIO_010081: AMC88_RS25680
subclass of: SO_0000673
so part of: AMC88_RS25680
location: 88644..89273
location: region:88644-89273:1
so has part: feature:88644-89273:1:exon

WP_046977178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88644-89273:1:exon

AMC88_RS25685
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: sctL
locus tag: AMC88_RS25685
old locus tag: AMC88_PC00080
so part of: sequence
location: 89270..89833
location: region:89270-89833:1
so has part: feature:89270-89833:1:exon
subclass of: SO_0000010

45960416
type: Gene
SIO_000068: ncbigene

position:89270:1
position: 89270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89833:1
position: 89833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89270-89833:1:exon

AMC88_RS25685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: sctL
locus tag: AMC88_RS25685
old locus tag: AMC88_PC00080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636029.1
GO component: GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system stator protein SctL
translation: MSSGFARHDRIIPAESFGQIREAAQILEAARHDAAQSQATLAAASEQAAQNGYRDGFEQGVRDAAARLAASLGKAEQEIANLDSWVEAVVLKSVGLILGSMEADERTRRLVRHAISQTAEAQEIALHVAPDDAAMIARAIADIDHRITIETDPLMSAGEIILETSAGRSQIGLKDQLATVIEALVHG
SIO_010081: AMC88_RS25685
subclass of: SO_0000673
so part of: AMC88_RS25685
location: 89270..89833
location: region:89270-89833:1
so has part: feature:89270-89833:1:exon

WP_046977179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89270-89833:1:exon

AMC88_RS25690
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25690
old locus tag: AMC88_PC00081
so part of: sequence
location: 89826..91145
location: region:89826-91145:1
so has part: feature:89826-91145:1:exon
subclass of: SO_0000010

45960417
type: Gene
SIO_000068: ncbigene

position:89826:1
position: 89826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91145:1
position: 91145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89826-91145:1:exon

AMC88_RS25690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25690
old locus tag: AMC88_PC00081
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004672587.1
GO component: GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0046034 - ATP metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FliI/YscN family ATPase
translation: MVDALLRMERRLEQTDVRRQSGRVKSVSGLLVRALIPSVRIGELCELHEPGRGRIGLADVVGIDGETALLSLHGETRGISLRTEIVPTGREPAVSVGNFLLGAIVDAHGNILRPSANPAGEDARFLQPLYGQPVDPLSRRPIRQPFTSGIAALDGLLTCGQGQRIGIFGAPGAGKSTLVSQIVANNKADVIVCALVGERGREVGEFVAGNMPEGVPSNVALVVATSDRPALERFKAVMTATAIAEYFREQGKHVLLVIDSVTRMARALREVGLAAGEPPVRRGFPPSVFAVLPQIFERAGNSANGTMTAFYTVLVEGEEQDDPIAEETRSLLDGHIVLSDKIARAGNFPAIDVLASRSRTMSAVVSESHRQAADRLRALLALYDEVELLIRVGEYRQGRDAAVDEAVAKHGLIQRFLFDGQGKPQPFGVIVEAIEELVR
SIO_010081: AMC88_RS25690
subclass of: SO_0000673
so part of: AMC88_RS25690
location: 89826..91145
location: region:89826-91145:1
so has part: feature:89826-91145:1:exon

WP_046977180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89826-91145:1:exon

AMC88_RS25695
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25695
old locus tag: AMC88_PC00082
so part of: sequence
location: 91142..92161
location: region:91142-92161:1
so has part: feature:91142-92161:1:exon
subclass of: SO_0000010

45960418
type: Gene
SIO_000068: ncbigene

position:91142:1
position: 91142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92161:1
position: 92161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91142-92161:1:exon

AMC88_RS25695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25695
old locus tag: AMC88_PC00082
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489459.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FliM/FliN family flagellar motor switch protein
translation: MNIAATAWPRSSMAESFFSRSDTMMRAAWQIPVREQTLSVRPLSPDIAAARIVDPVGLLCRIGEREQMLIASAGALRLLAERLEPLLLWEKLSPHEQAAVVEHQFVEAFEAIENKIGISLSLLQIGVEPQPDASGNFGFEIGWNGMSLPLSGRFDEAFLNGLVGWASRLPRRTLDALTTTVGIRRGYAVLSVGEIKSLRLGDGIVIDGAAPETVIAITGERYLATCMRSDKGAVLTQPLLSTPTGPMRHFMTNETVDQELQGEPRPSPVDSIPIKLVFDAGRLELPLRTLETIGEGYVFNLDRPLTDAVDIIAQGRVIGRGEIISVDGLSAVRVTMLHD
SIO_010081: AMC88_RS25695
subclass of: SO_0000673
so part of: AMC88_RS25695
location: 91142..92161
location: region:91142-92161:1
so has part: feature:91142-92161:1:exon

WP_046977181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91142-92161:1:exon

AMC88_RS25700
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: sctR
locus tag: AMC88_RS25700
old locus tag: AMC88_PC00083
so part of: sequence
location: 92161..92814
location: region:92161-92814:1
so has part: feature:92161-92814:1:exon
subclass of: SO_0000010

45960419
type: Gene
SIO_000068: ncbigene

position:92814:1
position: 92814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92161-92814:1:exon

AMC88_RS25700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: sctR
locus tag: AMC88_RS25700
old locus tag: AMC88_PC00083
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636018.1
GO component: GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system export apparatus subunit SctR
translation: MEQTFPLAQSLVAMAAISMLPVIAVIATSFTKISVVLLIVRNAIGIQQTPPNLLVFAIAIVLSAFVMNPVLQNSWQLLLAHSGDFATVSGMADGMVKVAAPLKDFMLKFSDAEVRDFFVQASQKIWANAPVSPIASDDITVLTPSFLVSELTRAFEIGFLIYLPFLMIDFAVSAILVALGMQMMSPTVVSTPLKLLLFVSIDGWRRLLEGLVLSYAQ
SIO_010081: AMC88_RS25700
subclass of: SO_0000673
so part of: AMC88_RS25700
location: 92161..92814
location: region:92161-92814:1
so has part: feature:92161-92814:1:exon

WP_046977182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92161-92814:1:exon

AMC88_RS25705
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25705
old locus tag: AMC88_PC00084
so part of: sequence
location: 92880..93149
location: region:92880-93149:1
so has part: feature:92880-93149:1:exon
subclass of: SO_0000010

45960420
type: Gene
SIO_000068: ncbigene

position:92880:1
position: 92880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93149:1
position: 93149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92880-93149:1:exon

AMC88_RS25705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25705
old locus tag: AMC88_PC00084
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015241680.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthetic protein FliQ
translation: MGEDQVAAEIGMSVMATFALAGPILGLAALLGLVIAIFQAATQIQEQTIAQIVKIFVISITLLLFGRVLATPLIEHSVHILNDFPTMVQ
SIO_010081: AMC88_RS25705
subclass of: SO_0000673
so part of: AMC88_RS25705
location: 92880..93149
location: region:92880-93149:1
so has part: feature:92880-93149:1:exon

WP_046977183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92880-93149:1:exon

AMC88_RS25710
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25710
old locus tag: AMC88_PC00085
so part of: sequence
location: 93160..93969
location: region:93160-93969:1
so has part: feature:93160-93969:1:exon
subclass of: SO_0000010

45960421
type: Gene
SIO_000068: ncbigene

position:93160:1
position: 93160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93969:1
position: 93969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93160-93969:1:exon

AMC88_RS25710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25710
old locus tag: AMC88_PC00085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534267.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0006605 - protein targeting [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthetic protein FliR
translation: MGPDHLPLVGIEVAAPAAAMLGAARALGILLIFPIFSLFSIVGILRFGLAIGLSAPSVAFAYSTLALGDTSWFDLAALSMKELCFGALVGMGLGIPFWAAQAAGDMTDVYRGANAANLFDQINALETAPLGSLMMSIALVIFVSAGGIIDLVAIFYKSFEFWPLFKLMPAMPDDPLDMILGVFGRLFKAAGLLAAPFMIVTCALELSLAFVGRSSKQFPLNDSLPAIKNFAVVVILVIYTAFISSYFHDLWIDGFNEVKAMLEVTHGQK
SIO_010081: AMC88_RS25710
subclass of: SO_0000673
so part of: AMC88_RS25710
location: 93160..93969
location: region:93160-93969:1
so has part: feature:93160-93969:1:exon

WP_046977184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93160-93969:1:exon

AMC88_RS25715
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25715
old locus tag: AMC88_PC00086
so part of: sequence
location: 93956..94753
location: region:93956-94753:1
so has part: feature:93956-94753:1:exon
subclass of: SO_0000010

45960422
type: Gene
SIO_000068: ncbigene

position:93956:1
position: 93956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94753:1
position: 94753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93956-94753:1:exon

AMC88_RS25715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25715
old locus tag: AMC88_PC00086
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053325.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscU/YscU/HrcU family type III secretion system export apparatus switch protein
translation: MAKNDDTEEKTLPPSRVKLDRLRREGQVPRSKEIPVAISVLAIAVYVTWGLPDILEDFTRSFDSGLQSAARADLSDAVTVGLSETGVALLDLMWLPLAMGLAATILVSILDGQGFPVSFKHMSFDFTRLNPFEGIKRLFSLASIAEFVKGLVKFVLLAAAGGGAILYFLNSIFWSPLCGEACTLSTTAHLLGSILVIAAGIMVAAAFFDIRISRALFRHEHRMTKTEARREYKDTQGDPKLKSARRQIGAEMRSSPPRRQGPGRQ
SIO_010081: AMC88_RS25715
subclass of: SO_0000673
so part of: AMC88_RS25715
location: 93956..94753
location: region:93956-94753:1
so has part: feature:93956-94753:1:exon

WP_046977185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93956-94753:1:exon

AMC88_RS25720
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25720
old locus tag: AMC88_PC00087
so part of: sequence
location: complement(94814..95728)
location: region:94814-95728:-1
so has part: feature:94814-95728:-1:exon
subclass of: SO_0000010

45960423
type: Gene
SIO_000068: ncbigene

position:94814:-1
position: 94814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95728:-1
position: 95728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94814-95728:-1:exon

AMC88_RS25720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25720
old locus tag: AMC88_PC00087
EC number: 4.2.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489463.1
GO component: GO:0005576 - extracellular region [Evidence IEA]
GO function: GO:0030570 - pectate lyase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pectate lyase
translation: MCGVDGQRPIDFDRTSRFDLESDCLGGSNRADTDFTAIRTRKVSPFEDFSGNPPTLTSYVPKSRETSENGMDSDPKDLLRKHINWQSHSKKVDPSDEKQATTLQTTTEKPDLSKEGSVIVVNEPIVVDGGVFDGKGATYTASSKLGDGGQSETQSPLFILKNGATLKNVDLGENGADGIHVYGGATLENVNWQNVGEDALTVKSAGDVTIIGGSAKGATDKIFQINADTRFYLKDFVADGFTTLVRTNGGKQIDADVTIDGGAFSHGSNVFRTDSSLASVTFLSDITLDDVKNWTRVGDNQSGV
SIO_010081: AMC88_RS25720
subclass of: SO_0000673
so part of: AMC88_RS25720
location: complement(94814..95728)
location: region:94814-95728:-1
so has part: feature:94814-95728:-1:exon

WP_046977186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94814-95728:-1:exon

AMC88_RS25725
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25725
old locus tag: AMC88_PC00088
so part of: sequence
location: complement(95771..97702)
location: region:95771-97702:-1
so has part: feature:95771-97702:-1:exon
subclass of: SO_0000010

45960424
type: Gene
SIO_000068: ncbigene

position:95771:-1
position: 95771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97702:-1
position: 97702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95771-97702:-1:exon

AMC88_RS25725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25725
old locus tag: AMC88_PC00088
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534277.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthesis protein FlhA
translation: MKVRSSAIAMLAQRTDMLLAVFFASVVTMLVLPLPTIVLDVLIAFNLSFAFVVLITTTYLKSVLEIATFPAVILIGTLFRLALTISSTRLVLADADAGEIIMAFGDFVVAGNVVVGLIIFLIVALVQFIVVTKGAERIAEVGARFTLDAMPGKQLAIDSDLRNGHISTEAAQKRRSRLEQESQFFGAMDGAMRFVKGDAVAGLVIVAVNLIGGLAIGIFQKGLSFAEAAHLYTLLSIGDGLVSQIPSILMAVSAGIVVTRVSDDGNGSLGSDIGRELFREPRALAIAAALTICAGFVPGFPTGVLGAIGLCLAGLAFMVHRRRTGPAAAGSANAVESANSYPLDRTKYGDPVVATVSVETLARLEAMRLGEMLDGRIRMAARAVGVSVTVPTFNADPRMAEDLIHLQVENVPAGLVSCGPERTAEQIADDIVRIVRRHIGALFSVDDAAQWLGSLEPRLGKLAIDVATQVPLMLTVAVVRRLLDSGVTLSQPRGLLEVMLHAGTDHAPDALAEMARAALVKQIAFGLLDRRGLLPALVLPAEWDHFIRSYDAAGATEKIEIAERLRLLAEKARQALEDANERGYDPIIIVPGEWRLLTQTLMIHHNCRIPVLAAEEIDRDITIETIGEIGQIRNAAGSKQRPG
SIO_010081: AMC88_RS25725
subclass of: SO_0000673
so part of: AMC88_RS25725
location: complement(95771..97702)
location: region:95771-97702:-1
so has part: feature:95771-97702:-1:exon

WP_064820007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95771-97702:-1:exon

AMC88_RS25730
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25730
old locus tag: AMC88_PC00089
so part of: sequence
location: complement(97726..98694)
location: region:97726-98694:-1
so has part: feature:97726-98694:-1:exon
subclass of: SO_0000010

45960425
type: Gene
SIO_000068: ncbigene

position:97726:-1
position: 97726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98694:-1
position: 98694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97726-98694:-1:exon

AMC88_RS25730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25730
old locus tag: AMC88_PC00089
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737415.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTMDLDPSSPTFRGNAGNTASGSGGPVLRITRAGRSSILPLTAERQVVGGSADCDLIILGAKPEPAFAISLQRSRGSDTVSLTALRDDVAIDGRSIPRDRTMSLTKRQTISFDGTICELEGLGARRVRFEPRRIAAAGLLGLAALLLLAGLYNSDAPAHEAPLVKVSAAPEPAPSSAAIAAEIRQAIRMAQLPQDLSIVATADEIRIGEGSRPLGLPDETKLRSIIASMSRRGSVSIVDLTALSSGLDGFVAAAGYTPVRFIIGSDGRRYEEGDVVASGWRIKEIGKDQMIVSRDSEDDTVNFASAGNAEPKLAEISSSEQE
SIO_010081: AMC88_RS25730
subclass of: SO_0000673
so part of: AMC88_RS25730
location: complement(97726..98694)
location: region:97726-98694:-1
so has part: feature:97726-98694:-1:exon

WP_064820008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97726-98694:-1:exon

AMC88_RS33775
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33775
old locus tag: AMC88_PC00090
so part of: sequence
location: complement(98783..98950)
location: region:98783-98950:-1
so has part: feature:98783-98950:-1:exon
subclass of: SO_0000010

45961811
type: Gene
SIO_000068: ncbigene

position:98783:-1
position: 98783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98950:-1
position: 98950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98783-98950:-1:exon

AMC88_RS33775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33775
old locus tag: AMC88_PC00090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007691372.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATSTSTSTLDAGIGSAISAFKSAQNEATAQSLQVATEITKINGVANAIKKIGPG
SIO_010081: AMC88_RS33775
subclass of: SO_0000673
so part of: AMC88_RS33775
location: complement(98783..98950)
location: region:98783-98950:-1
so has part: feature:98783-98950:-1:exon

WP_007636000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98783-98950:-1:exon

AMC88_RS25735
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25735
old locus tag: AMC88_PC00091
so part of: sequence
location: 99205..99753
location: region:99205-99753:1
so has part: feature:99205-99753:1:exon
subclass of: SO_0000010

45960426
type: Gene
SIO_000068: ncbigene

position:99205:1
position: 99205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99753:1
position: 99753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99205-99753:1:exon

AMC88_RS25735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25735
old locus tag: AMC88_PC00091
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534289.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFARFVYMAAIGLLASFPPPAGASEREVRLDVVSLPLGDVVQTLSFMSGIPVTTVGTLSGKVEHWSVRESGAKAFVKLGDASNLFVAYDGSRIIIAPKQEVSTVVLDRGGRSWKTEQNAIRALFPLLPDDALREDPASGLVLVRGPAVFTKAVEDVLSRQQADSIKVIKGGQLEILTTNNGA
SIO_010081: AMC88_RS25735
subclass of: SO_0000673
so part of: AMC88_RS25735
location: 99205..99753
location: region:99205-99753:1
so has part: feature:99205-99753:1:exon

WP_008534289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99205-99753:1:exon

AMC88_RS25740
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25740
old locus tag: AMC88_PC00092
so part of: sequence
location: 99763..100176
location: region:99763-100176:1
so has part: feature:99763-100176:1:exon
subclass of: SO_0000010

45960427
type: Gene
SIO_000068: ncbigene

position:99763:1
position: 99763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100176:1
position: 100176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99763-100176:1:exon

AMC88_RS25740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25740
old locus tag: AMC88_PC00092
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004672597.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKALKSLRQLLQIRSLRADNLSRSLSEARADAESAREREAKASEALDIAASRAAGNPVVDALRKSDVISAAELQDALMRQSVLRSHEADASLSLAQRKAARRAAQERAEHVAADFSRAQKAVLRTEFSLEAAERIDR
SIO_010081: AMC88_RS25740
subclass of: SO_0000673
so part of: AMC88_RS25740
location: 99763..100176
location: region:99763-100176:1
so has part: feature:99763-100176:1:exon

WP_064830107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99763-100176:1:exon

AMC88_RS25745
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25745
old locus tag: AMC88_PC00093
so part of: sequence
location: complement(100181..100678)
location: region:100181-100678:-1
so has part: feature:100181-100678:-1:exon
subclass of: SO_0000010

45960428
type: Gene
SIO_000068: ncbigene

position:100181:-1
position: 100181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100678:-1
position: 100678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100181-100678:-1:exon

AMC88_RS25745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25745
old locus tag: AMC88_PC00093
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018247142.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MKRYAAAQVRTSRPAQAEQSNLARELVHPVDRHVGQQIRIRRMQSNVSLGDLGAGIGVSLQQVQKYESGKNRVSASMLYELANCLKIPVSRFFEGLPDPETTQGQQIITEIDEKIAYISTAEGRRLIDDVLLLSPRVRSRIVALVSSIVDEEMEEQKPVGSSAGS
SIO_010081: AMC88_RS25745
subclass of: SO_0000673
so part of: AMC88_RS25745
location: complement(100181..100678)
location: region:100181-100678:-1
so has part: feature:100181-100678:-1:exon

WP_064820010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100181-100678:-1:exon

AMC88_RS25750
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25750
old locus tag: AMC88_PC00094
so part of: sequence
location: 101138..101521
location: region:101138-101521:1
so has part: feature:101138-101521:1:exon
subclass of: SO_0000010

45960429
type: Gene
SIO_000068: ncbigene

position:101138:1
position: 101138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101521:1
position: 101521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101138-101521:1:exon

AMC88_RS25750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25750
old locus tag: AMC88_PC00094
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534295.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIEETDDTVTVLLWHLKYSQAVMGRRADDLYLVCGQAQKGVKGTWSLKNLINHLTVRETSHLKGRARFIRGSLNDLATLRKAARRKFIEYRIGIVQPGLNGENIPAEHLALLGATATSYCLSPGVP
SIO_010081: AMC88_RS25750
subclass of: SO_0000673
so part of: AMC88_RS25750
location: 101138..101521
location: region:101138-101521:1
so has part: feature:101138-101521:1:exon

WP_008534295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101138-101521:1:exon

AMC88_RS34175
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34175
pseudo: true
so part of: sequence
location: complement(101980..>102097)
location: region:101980-102097:-1
so has part: feature:101980-102097:-1:exon
subclass of: SO_0000010

70363069
type: Gene
SIO_000068: ncbigene

position:101980:-1
position: 101980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102097:-1
position: 102097
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101980-102097:-1:exon

AMC88_RS34175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019566648.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA polymerase IV
SIO_010081: AMC88_RS34175
subclass of: SO_0000673
so part of: AMC88_RS34175
location: complement(101980..>102097)
location: region:101980-102097:-1
so has part: feature:101980-102097:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101980-102097:-1:exon

AMC88_RS25755
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25755
old locus tag: AMC88_PC00095
so part of: sequence
location: 102079..102651
location: region:102079-102651:1
so has part: feature:102079-102651:1:exon
subclass of: SO_0000010

45960430
type: Gene
SIO_000068: ncbigene

position:102079:1
position: 102079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102651:1
position: 102651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102079-102651:1:exon

AMC88_RS25755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25755
old locus tag: AMC88_PC00095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010031884.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4334 domain-containing protein
translation: MDRQSPIDGASFDGVLEDLGWFGKRFTPDMRADVLLFRAGDRRLVAVDPKWIPLRLTLRFYKIDRTRVASNQVFLSPAPAAGEGPVASLKAMMFGCVKSAAMVYDDQPIVDHFRRIDAERIMGAKFRSAQVRHEPSRRQFLMSSSKGHIMLKYKLYVLVVKADGNLAILAALAMVLTAIWRGVLPIGSFY
SIO_010081: AMC88_RS25755
subclass of: SO_0000673
so part of: AMC88_RS25755
location: 102079..102651
location: region:102079-102651:1
so has part: feature:102079-102651:1:exon

WP_008534298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102079-102651:1:exon

AMC88_RS25760
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25760
old locus tag: AMC88_PC00096
so part of: sequence
location: complement(102721..103470)
location: region:102721-103470:-1
so has part: feature:102721-103470:-1:exon
subclass of: SO_0000010

45960431
type: Gene
SIO_000068: ncbigene

position:102721:-1
position: 102721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103470:-1
position: 103470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102721-103470:-1:exon

AMC88_RS25760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25760
old locus tag: AMC88_PC00096
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004675991.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPIALVDLDDTLFQTKKKIPEIAEADLVLASKSINGSNSYMTKIQAAFVEWLLVSTEAIPVTARGSEALSRVTIAFESYSIVSNGAVILKKDGKPDAEWHEVVARELRPLAGFFDKLLDEGRTKARELGVHIRCWSVMEADLATYVVFKEIDGDGSRLEEIVPIIREKRGWVRHHNGNNLALVPPAISKRVASQFLLKKLRTEHPGRPVIGYGDSVSDFSYLSLCDWWGAPGNSQMTDLVVSAVARER
SIO_010081: AMC88_RS25760
subclass of: SO_0000673
so part of: AMC88_RS25760
location: complement(102721..103470)
location: region:102721-103470:-1
so has part: feature:102721-103470:-1:exon

WP_004675991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102721-103470:-1:exon

AMC88_RS25765
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25765
old locus tag: AMC88_PC00097
so part of: sequence
location: complement(103629..104729)
location: region:103629-104729:-1
so has part: feature:103629-104729:-1:exon
subclass of: SO_0000010

45960432
type: Gene
SIO_000068: ncbigene

position:103629:-1
position: 103629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104729:-1
position: 104729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103629-104729:-1:exon

AMC88_RS25765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25765
old locus tag: AMC88_PC00097
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004675992.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tellurite-like stress resistance cysteine protease StiP
translation: MGDTYDSIASPATLGSYAEYDVTLLLKKVDIQPTDTATREEAIQSGRRHYSEMISAEMAPTREYMELFAKAMATGGPRMGAETARLALAIVQSVEGPITLVSLVRAGVPFGILLKRAIALLGRDVGHYGLSIIRDKGVDDEAMRHILARRPVESIVFVDSSTGKGAIANQLEKSFKDYSDRPARLVVLADPCGCAWLAASGDDWLIPSGMLGCTVSGLISRSILNAALVGPGDFHACVQWDNLAEHDISRSFVDGMWNDVSTVIATEIPSVWSIETRRAHRDAAAAAVAWVMGEDAVTNINRVKPGIAEATRAILRRVPEKVYVSSPTDPELAALMYLIDNKGVPYVVSPRKIAPYRAVTLIRHVS
SIO_010081: AMC88_RS25765
subclass of: SO_0000673
so part of: AMC88_RS25765
location: complement(103629..104729)
location: region:103629-104729:-1
so has part: feature:103629-104729:-1:exon

WP_064830108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103629-104729:-1:exon

AMC88_RS25770
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25770
old locus tag: AMC88_PC00098
so part of: sequence
location: complement(104844..105977)
location: region:104844-105977:-1
so has part: feature:104844-105977:-1:exon
subclass of: SO_0000010

45960433
type: Gene
SIO_000068: ncbigene

position:104844:-1
position: 104844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105977:-1
position: 105977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104844-105977:-1:exon

AMC88_RS25770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25770
old locus tag: AMC88_PC00098
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053330.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosyltransferase domain-containing protein
translation: MVNPSTYSAQLADGTISVHVDRSLVPPIEMFGFGQRINPNRSFLFVSKVLGRFLPIRPSVMGNAFDLLARQIPADIPGPVLFIGIAEAGIGLGAGVHRRFRELTGRGDAIYICSTRHDLKLPLLCEFEEEHSHAPRHLLHEPCEARLRDLVHGATGLVLVDDEASTGKTFANIFAALPAKIRLKLKHTVLLTLTDWSEGAARAEITGTVSEATIVSGRYSWTPRGDFTAATPQVPYCDRPKRPEVCPDVARDWARLGVVDHLQGLNANAADDGITLVLGTGEHVWQPFLLAERLEKEGAEVFYSSVTRSPLSKGHAIGSVLSFSDNYGGTVPHYLYNVDPALYSKIILCSETGPENVCASLMSALGDPIVLSDVEGE
SIO_010081: AMC88_RS25770
subclass of: SO_0000673
so part of: AMC88_RS25770
location: complement(104844..105977)
location: region:104844-105977:-1
so has part: feature:104844-105977:-1:exon

WP_225884181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104844-105977:-1:exon

AMC88_RS34180
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34180
pseudo: true
so part of: sequence
location: complement(106856..>106983)
location: region:106856-106983:-1
so has part: feature:106856-106983:-1:exon
subclass of: SO_0000010

70363070
type: Gene
SIO_000068: ncbigene

position:106856:-1
position: 106856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106983:-1
position: 106983
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106856-106983:-1:exon

AMC88_RS34180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013419362.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS481 family transposase
SIO_010081: AMC88_RS34180
subclass of: SO_0000673
so part of: AMC88_RS34180
location: complement(106856..>106983)
location: region:106856-106983:-1
so has part: feature:106856-106983:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106856-106983:-1:exon

AMC88_RS25780
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25780
pseudo: true
so part of: sequence
location: 107231..108381
location: region:107231-108381:1
so has part: feature:107231-108381:1:exon
subclass of: SO_0000010

45960434
type: Gene
SIO_000068: ncbigene

position:107231:1
position: 107231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108381:1
position: 108381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107231-108381:1:exon

AMC88_RS25780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012330183.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: AMC88_RS25780
subclass of: SO_0000673
so part of: AMC88_RS25780
location: 107231..108381
location: region:107231-108381:1
so has part: feature:107231-108381:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107231-108381:1:exon

AMC88_RS25785
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25785
old locus tag: AMC88_PC00102
so part of: sequence
location: 109148..110659
location: region:109148-110659:1
so has part: feature:109148-110659:1:exon
subclass of: SO_0000010

45960435
type: Gene
SIO_000068: ncbigene

position:109148:1
position: 109148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110659:1
position: 110659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109148-110659:1:exon

AMC88_RS25785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25785
old locus tag: AMC88_PC00102
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004668600.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosinase family protein
translation: MSITRRHVIVQGGVIAAGLLASGLPGTKAFAQIPSIPWRRSLQGLAWNDPIIETYRDAVRLLNALPASDKFNWVNLSKIHGSGDVVKYCPHGNWYFLPWHRAYTAMYERIVRHVTKNNDFAMPFWDWTDNPYLPEVFTMQKTPDGKDNPLYVSSRTWPITQPMPDNIVGPQVLNTILTAKPYEVFGTTRPEGQNSLDPSWVTTSSGTQGTLEYTPHNQVHNNIGGWMPEMSSPRDPIFFMHHCNIDRIWATWNLRNANSTDRLWADMPFTDNFYDVDGNFWSPKVSDLYVPEELGYNYGFRTYFKVAAASAKTLALNDKLTSVIAATATDAAIAGVTTTSTDNSKAATENVPLSLPIKIPAGALQEIVRQPPLPSGMDTMDFGAAQEQAASAPRVLAFLRDVEITSASTTSVRVFLGKNDLKADTPVTDPHYVGSFAVLGHDGDHHRKPSFVLDLTDAIQRVYGGRGQTDGEAIDLQLIPVGSGAGKPGAVEPAKLEIAIVSA
SIO_010081: AMC88_RS25785
subclass of: SO_0000673
so part of: AMC88_RS25785
location: 109148..110659
location: region:109148-110659:1
so has part: feature:109148-110659:1:exon

WP_008534313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109148-110659:1:exon

AMC88_RS32395
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32395
so part of: sequence
location: 110691..111146
location: region:110691-111146:1
so has part: feature:110691-111146:1:exon
subclass of: SO_0000010

45961642
type: Gene
SIO_000068: ncbigene

position:110691:1
position: 110691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111146:1
position: 111146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110691-111146:1:exon

AMC88_RS32395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053334.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRYHRWVLIAIRAAALSMLRIVSPVQANESDMRATTSKPATITISSRAVHSSADTSARVVLTVTGYEPSTSGPVTTVVSLDCGSNVREIGRFGIFPNKAFSVLDGAKPQRFGFPLPDDPSCRQPQTVIIRLEPQTGGGSGASITISDASIE
SIO_010081: AMC88_RS32395
subclass of: SO_0000673
so part of: AMC88_RS32395
location: 110691..111146
location: region:110691-111146:1
so has part: feature:110691-111146:1:exon

WP_004668602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110691-111146:1:exon

AMC88_RS25790
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25790
old locus tag: AMC88_PC00103
so part of: sequence
location: 111629..113158
location: region:111629-113158:1
so has part: feature:111629-113158:1:exon
subclass of: SO_0000010

45960436
type: Gene
SIO_000068: ncbigene

position:111629:1
position: 111629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113158:1
position: 113158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111629-113158:1:exon

AMC88_RS25790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25790
old locus tag: AMC88_PC00103
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004668604.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRRDFSTVGLTALLAGIVFPAFPSTGFSEQRKPSIPALPDQRKLWSWIKRLNSFGPRLTGSPAQARAIDYLAGELRGMGLEVKRDQLTMRRWMPRTTAFKLSNGEVIEVAAPFPYSGLTPPGGISGKMVLFNGRVQAFEKARGKIAVVTVKRRDLAAFLELVTNRRGSLPEGIDFPKAVTTPLITGLLGVPIDKAREAGVLAVVCIFEGVSEVQLKGQVLPFTTPYWGLPAIWVAQSEGERIKAAIKHGLSGRLTLDGTLEDVATDTIYAVLPGCNLLETIIINTHTDGPNACEENGGAGVLALAHYFSSLPKSARNRSLVFVLVTGHFQLAQFGRHGNQATATWLEMHPELWDGKPGHAKAVAGATIEHLGCTEWRDDFAKGHPAPTGKPELDLIYTSNKSMSGVYIAAARGRKKVRALIVAPAAAQVMLGEGQPLYASGIPTISSCPIPDYLCQVLPGGGLDRLDPDYAFQQVETFARTVDLLDRMPRGEIGIVPFNLSTVIGDLL
SIO_010081: AMC88_RS25790
subclass of: SO_0000673
so part of: AMC88_RS25790
location: 111629..113158
location: region:111629-113158:1
so has part: feature:111629-113158:1:exon

WP_004668604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111629-113158:1:exon

AMC88_RS33320
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33320
pseudo: true
so part of: sequence
location: <113224..>113393
location: region:113224-113393:1
so has part: feature:113224-113393:1:exon
subclass of: SO_0000010

45961734
type: Gene
SIO_000068: ncbigene

position:113224:1
position: 113224
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:113393:1
position: 113393
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113224-113393:1:exon

AMC88_RS33320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612363.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: AMC88_RS33320
subclass of: SO_0000673
so part of: AMC88_RS33320
location: <113224..>113393
location: region:113224-113393:1
so has part: feature:113224-113393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113224-113393:1:exon

AMC88_RS25795
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25795
old locus tag: AMC88_PC00104
so part of: sequence
location: 113820..116210
location: region:113820-116210:1
so has part: feature:113820-116210:1:exon
subclass of: SO_0000010

45960437
type: Gene
SIO_000068: ncbigene

position:113820:1
position: 113820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116210:1
position: 116210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113820-116210:1:exon

AMC88_RS25795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25795
old locus tag: AMC88_PC00104
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053336.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3141 domain-containing protein
translation: MADILTSLNPLRWIEAPSTELESQVTQSLFPMFQRLAEAGAETAKILQVALLRRVQVMCDSHSTRQGKLFTEAERLAESLREVHGNGNLGYAWAEYLRDASERAILCMDLLRQRGDIFLEHEAAGCPPVFFCDYETVMDGNDLPLKSNYVLLRMIPPQGVNVDDTKRPFIIICPRAGHSPGVGGHKEDSQVGVAFREGHPVYLVSFRREPEGGQYLSNVTYAEAAFVREVMRLHPLARLPVVVGNCQAGWATLLMVATNLDLAGPIILNGSPVTPTSGNIGENTLRYMAGLFGGAWITMFLSDLGGGIFDGAHLVQNFETLNPERQLFMKYVELFRDVDAASEAFLKAEKWWGGFCLMRGDEIRWIVEHLFVGNRLAHNKAYGEPDRRHFDLKKIRAPIIIFASHGDNVTPPQQALNWIPEIYDNEEEIRLLGQHIIYMVHNDVGHLGTFVSSRVINKEYNEVASTLEAIEALLPGLYEMRITDIQEDAGHKSYSVELIERTFENIREFNDGHDDGGPFAAVARVSELQAQIYHTVARPFVQAAVTDISADASRMFHPKRLERSLLSSQNPIMVGYKSISEQVRNSRANAAAENPFLAAEALYFKAVEQAIVVMRDWRDMGYELAFHMIWNNPWQRYFDNPHEAYRKGTTLDDMRWQPDIANALRRIAIGGLADAIIRMVVLLVSDRGGIRRDRLARWSRVLTEDEPFRSLSADHLAEITRVQTAIVTFEPEQAMETLPLLLTEPRQRQLAYAAACYIPGSRAEMSSSTVAMLQRFADVLGQPSIVDVIEDPLAVT
SIO_010081: AMC88_RS25795
subclass of: SO_0000673
so part of: AMC88_RS25795
location: 113820..116210
location: region:113820-116210:1
so has part: feature:113820-116210:1:exon

WP_011053336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113820-116210:1:exon

AMC88_RS32400
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32400
pseudo: true
so part of: sequence
location: complement(116434..>116759)
location: region:116434-116759:-1
so has part: feature:116434-116759:-1:exon
subclass of: SO_0000010

45961643
type: Gene
SIO_000068: ncbigene

position:116434:-1
position: 116434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116759:-1
position: 116759
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116434-116759:-1:exon

AMC88_RS32400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018855502.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HipA family toxin
SIO_010081: AMC88_RS32400
subclass of: SO_0000673
so part of: AMC88_RS32400
location: complement(116434..>116759)
location: region:116434-116759:-1
so has part: feature:116434-116759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116434-116759:-1:exon

AMC88_RS32405
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32405
so part of: sequence
location: complement(116908..117243)
location: region:116908-117243:-1
so has part: feature:116908-117243:-1:exon
subclass of: SO_0000010

45961644
type: Gene
SIO_000068: ncbigene

position:116908:-1
position: 116908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117243:-1
position: 117243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116908-117243:-1:exon

AMC88_RS32405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007537192.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MPTPHNAPAAVRRALRKLGADIHDARRRRRLPMAVVAERAFTSRSTLQKIEAGDTNVSIGIYAGVLQALGLLDGLSQVADLRNDSVGQSLANAELPKHAHPRRSPGSSRDG
SIO_010081: AMC88_RS32405
subclass of: SO_0000673
so part of: AMC88_RS32405
location: complement(116908..117243)
location: region:116908-117243:-1
so has part: feature:116908-117243:-1:exon

WP_081279418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116908-117243:-1:exon

AMC88_RS25800
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25800
old locus tag: AMC88_PC00105
so part of: sequence
location: 117840..118520
location: region:117840-118520:1
so has part: feature:117840-118520:1:exon
subclass of: SO_0000010

45960438
type: Gene
SIO_000068: ncbigene

position:117840:1
position: 117840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118520:1
position: 118520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117840-118520:1:exon

AMC88_RS25800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25800
old locus tag: AMC88_PC00105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004668612.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MVDVELQVARQNASLRVQVEERLRQAIATGKFKPGQRLVERELCEMIGVGRTSVREALRQLEAEGLITSFPHKGPVVSIITYEEAAQLYTVRALLEGFAGQQFAENGTAEDIATLQDAVREFEASAESGVGHRLIAAKNAFYDCLMDGSKNVFVRQMLTSLHNRINLLRMTSMTQPGRLKHSIAEIKEIAEAIQNRNGPRAAAACKHHIDMAAKVALEYLRNNTSG
SIO_010081: AMC88_RS25800
subclass of: SO_0000673
so part of: AMC88_RS25800
location: 117840..118520
location: region:117840-118520:1
so has part: feature:117840-118520:1:exon

WP_004668612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117840-118520:1:exon

AMC88_RS25805
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25805
old locus tag: AMC88_PC00106
so part of: sequence
location: 118835..119719
location: region:118835-119719:1
so has part: feature:118835-119719:1:exon
subclass of: SO_0000010

45960439
type: Gene
SIO_000068: ncbigene

position:118835:1
position: 118835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119719:1
position: 119719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118835-119719:1:exon

AMC88_RS25805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25805
old locus tag: AMC88_PC00106
EC number: 1.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053340.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent oxidoreductase
translation: MSPRKNLRVAFIGLGAMGGPMAQHLLSAQFEVTGFDLSAEARERFAAVGGVPAETVAEAFNGADVAVTMLPNGKVVQDALFKDGAWQSLSADALVIDMSSSAPNDTRELAERLHQKGLRLVDAPVSGGVKRAVEGSLTIMAGGASDDIDQADPILCAMGGQIFRTGPIGSGHAMKAINNFVSGAGVLAAIEGVLLGRTFGLDPRTIVDILNSSSGKNNATEVKMKQFILSETFGSGFALGLMAKDIRIAADLSKALNLQLPTLAGTADAWDAARHALGPDVDHTKIAQFVKDQA
SIO_010081: AMC88_RS25805
subclass of: SO_0000673
so part of: AMC88_RS25805
location: 118835..119719
location: region:118835-119719:1
so has part: feature:118835-119719:1:exon

WP_004668614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118835-119719:1:exon

AMC88_RS25810
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25810
old locus tag: AMC88_PC00107
so part of: sequence
location: 119797..120225
location: region:119797-120225:1
so has part: feature:119797-120225:1:exon
subclass of: SO_0000010

45960440
type: Gene
SIO_000068: ncbigene

position:119797:1
position: 119797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120225:1
position: 120225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119797-120225:1:exon

AMC88_RS25810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25810
old locus tag: AMC88_PC00107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004668619.1
GO function: GO:0051920 - peroxiredoxin activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxymuconolactone decarboxylase family protein
translation: MATLDRKDKGSKAGERTAPSEQFKRGLATRRQVMGDAYVDAALGKATDFTWPMQELVTEYCWDNIWNRPGLDRRARSILNLGMIAVLNRPHELRGHIRGAINNGVTKQEIQEIFLQVAIYVGVPAGIDSFRHAQEVFTEMGI
SIO_010081: AMC88_RS25810
subclass of: SO_0000673
so part of: AMC88_RS25810
location: 119797..120225
location: region:119797-120225:1
so has part: feature:119797-120225:1:exon

WP_004668619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119797-120225:1:exon

AMC88_RS25815
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25815
old locus tag: AMC88_PC00108
so part of: sequence
location: 120303..120686
location: region:120303-120686:1
so has part: feature:120303-120686:1:exon
subclass of: SO_0000010

45960441
type: Gene
SIO_000068: ncbigene

position:120303:1
position: 120303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120686:1
position: 120686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120303-120686:1:exon

AMC88_RS25815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25815
old locus tag: AMC88_PC00108
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004668622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIDLKKFIEFVREDFEFKRETRYLNGILKCDFPTRSVALHFEDGTLLKVEEAEYDDDKCTIVIRGTGSQWEALLQHKPLPFYQCLQSSNIKHGLYLSSNNETFAYLPALNRMTTLMRNARSEGAAA
SIO_010081: AMC88_RS25815
subclass of: SO_0000673
so part of: AMC88_RS25815
location: 120303..120686
location: region:120303-120686:1
so has part: feature:120303-120686:1:exon

WP_004668622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120303-120686:1:exon

AMC88_RS25820
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25820
old locus tag: AMC88_PC00109
so part of: sequence
location: 120683..121579
location: region:120683-121579:1
so has part: feature:120683-121579:1:exon
subclass of: SO_0000010

45960442
type: Gene
SIO_000068: ncbigene

position:120683:1
position: 120683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121579:1
position: 121579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120683-121579:1:exon

AMC88_RS25820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25820
old locus tag: AMC88_PC00109
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004668623.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MTKFDPIIGRYLYLTVEGIEYRVYYEEAGQGIPLLVGHTAGSDGRQYRHMLCDSDVTKNFRVIAFDLPYHGKSLPPYGVRWWEKEYNMTKKFMMDFQLELSKALDLDRPVYLGSSMGGHLAIDLASNYPDNFRATISVEGALRSAAEYVDVGMAGIRREFDNPNVNRTSIGAAMMLNISPYSPEANVREIQWEYSCGGPGIFAGDLYYYYYDHDVSPEEASKIDTSKCMLYFLTGEYDPNTSPADTKIAADLVKGSKFWTMEKLGHFPVTEDYSEFRKYLLPILEEIQQSSAARSKVA
SIO_010081: AMC88_RS25820
subclass of: SO_0000673
so part of: AMC88_RS25820
location: 120683..121579
location: region:120683-121579:1
so has part: feature:120683-121579:1:exon

WP_004668623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120683-121579:1:exon

AMC88_RS25825
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25825
old locus tag: AMC88_PC00110
so part of: sequence
location: 121605..122771
location: region:121605-122771:1
so has part: feature:121605-122771:1:exon
subclass of: SO_0000010

45960443
type: Gene
SIO_000068: ncbigene

position:121605:1
position: 121605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122771:1
position: 122771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121605-122771:1:exon

AMC88_RS25825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25825
old locus tag: AMC88_PC00110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004668626.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MRCILNVTLGALISVSALATTAYADGVDQLPATEKKIYETVDPQIPLGASAYKDFKPKKGPPWKIGYASSYAGNTWRAAALDAVMSDLLPRSKAAGLVSDVVVTQSDLKDAVQIQQMRQMVDEGVDAIIICCSNVTALNQTIEYAYKAGVPVFSFSGYVTSPYAINGAANHAQGGAEMATWLAEKIGKKGNILLVSGIPGFASSDSFDKAAKEALAKYPDIKIVGEVAGKWTDQVAQVEVQKFLATNPTKIDGILTQGAQENGVLNAMLQSGRDMIPITLGGEASAACYWRKNPEFVDRSFHIWPPRREMQQMWEIMLRTLEGQGPKVQSFLRPVLPYTIDEVRAAIPEDCDLNSTDFVEPKADGWFPAAIAADYFERPANPWKPVSK
SIO_010081: AMC88_RS25825
subclass of: SO_0000673
so part of: AMC88_RS25825
location: 121605..122771
location: region:121605-122771:1
so has part: feature:121605-122771:1:exon

WP_004668626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121605-122771:1:exon

AMC88_RS25830
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25830
old locus tag: AMC88_PC00111
so part of: sequence
location: 122863..124416
location: region:122863-124416:1
so has part: feature:122863-124416:1:exon
subclass of: SO_0000010

45960444
type: Gene
SIO_000068: ncbigene

position:122863:1
position: 122863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124416:1
position: 124416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122863-124416:1:exon

AMC88_RS25830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25830
old locus tag: AMC88_PC00111
EC number: 7.5.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004668627.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter ATP-binding protein
translation: MQNQTTIKLINVAKSFGETKALKKCDFEARAGEVHAIVGENGSGKSTMAKIMSGVLHPDSGSVSVLGEEISTPTDAKRIGLTTIFQEVLVADEASVLENLYVGRDGIFRSQGGSGRRTEAEEILKRLVGKPVDLDQNVGALPLSVKQWIVIARAVLRRPKVLILDESSAALDLDSTIRLHEEIDRLRREGATVLIVTHRIAELVRIADRATILRDGVTIGTLEKHEITEENLLSMMTPADRNASDAKAYESKQVGAAAPAVVAVRDLVTHSAAAPFDFDLPKGAIIGVAGLDGQGQDAFVRAVAGIIQPFGGNVQVWSSSTERMKKVASLEDATKAGISYISGDRKREGIFPQQSIFENLAIGVYRKNLGPLGIINKAGLKPMFKREVDRLRIKIGSPANKITSLSGGNQQKVLIGRAFANEPSVIVLNDPARGVDLGTKRDLYRELRLFTEKGGSVIYLSSEIEEFIGFADRVDVFFAGRLFRSLAGEDIAEEPILAAMFGKSPNASIEFDLERTA
SIO_010081: AMC88_RS25830
subclass of: SO_0000673
so part of: AMC88_RS25830
location: 122863..124416
location: region:122863-124416:1
so has part: feature:122863-124416:1:exon

WP_004668627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122863-124416:1:exon

AMC88_RS25835
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25835
old locus tag: AMC88_PC00112
so part of: sequence
location: 124413..125387
location: region:124413-125387:1
so has part: feature:124413-125387:1:exon
subclass of: SO_0000010

45960445
type: Gene
SIO_000068: ncbigene

position:124413:1
position: 124413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125387:1
position: 125387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124413-125387:1:exon

AMC88_RS25835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25835
old locus tag: AMC88_PC00112
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534336.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MMSGIAFRQITQDRSLFVPAGLFIVLLVAVALRGHGLFTNNGLAGAILVATPLILTALALTPIVMAGRGAVDLSVGPLMGFINVTLITWLVGNGITNPIAVIVWAVGLGAAFQLLQALVIIYVRVAPIIVTLSGFLVLSGLNLMVMSRPGGVAPDWMLSWGAGTDIMSPVLLLLVAAYALWLLLRGTMFYRNLRMTGADERMAYTSGVRVDAVRIIAHVVGGAFAGLAALSYTALISSGDPTQGSTYTLQAVTALVLGGASLSGGRGGALGSTLGAINMFLISYLLSTFNFGTVSGFVTQMAFGLILVGSLLVNVFVISRRAVV
SIO_010081: AMC88_RS25835
subclass of: SO_0000673
so part of: AMC88_RS25835
location: 124413..125387
location: region:124413-125387:1
so has part: feature:124413-125387:1:exon

WP_008534336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124413-125387:1:exon

AMC88_RS25840
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25840
old locus tag: AMC88_PC00113
so part of: sequence
location: 125399..126418
location: region:125399-126418:1
so has part: feature:125399-126418:1:exon
subclass of: SO_0000010

45960446
type: Gene
SIO_000068: ncbigene

position:125399:1
position: 125399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126418:1
position: 126418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125399-126418:1:exon

AMC88_RS25840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25840
old locus tag: AMC88_PC00113
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004668632.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MVATVMNSEIKSAQKSNPLKAHRSIVIGFVLLASLLALGALLVPGFVSSQNARSILLLAAFLGLASIGQTLCALVGALDLSIPYIIGGANILLPSLMVAGIPAPLAMLVVMLLGALVGAANGALSFRLQGQALIMSLGVGFAAVGAVQIYTSLGSAFGGTVFAPVPEWLRNISAFNGKFFGLSLPPVIVIWAIVAIALGWFMYNTWFGRSIYAVGGSRTAAARLGISEFKVWTVIHSVSGAMSAITGMLLLGFSGGGFVGVGDPYLFTTVAAVVIGGTSLLGGAGGYGATVLGVLVLTVLTSLLVGLGLNFPAQQAVVGLLIVPMVAIYARSPHIRNQI
SIO_010081: AMC88_RS25840
subclass of: SO_0000673
so part of: AMC88_RS25840
location: 125399..126418
location: region:125399-126418:1
so has part: feature:125399-126418:1:exon

WP_004668632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125399-126418:1:exon

AMC88_RS25845
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25845
old locus tag: AMC88_PC00114
so part of: sequence
location: 126442..127929
location: region:126442-127929:1
so has part: feature:126442-127929:1:exon
subclass of: SO_0000010

45960447
type: Gene
SIO_000068: ncbigene

position:126442:1
position: 126442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127929:1
position: 127929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126442-127929:1:exon

AMC88_RS25845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25845
old locus tag: AMC88_PC00114
EC number: 1.2.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004668634.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent succinate-semialdehyde dehydrogenase
translation: MAISSTLLGRLKDQTLVREQMLVGGKWSSEGVNGTRINVLNPSTMDVLASLPSAGLAEVRASIDAAKAAQKKWAKVSAKERSLIMRKFYEEVVANAEDLAVILTSEMGKPLAEARGEIAYGASYIEWFGEEAKRVYGDTIPGHQADKRLLVIKQPVGVVAAIAPWNFPSAMVCRKIAPALASGCAIVFKPAAETPLSALALAILAERAGIPDGLFSVLPTDNARMFGEEVCSNPVVKKLTFTGSTEVGRILMAQGAQKIMKLSLELGGNAPFIVFDDADLDQAVEGAMLSKFRNAGQTCVCANRIYVQSGIHDRFVEKLAMRVSALQVLDGFESGATIGPLINDEAVAKLYGHIDDAVTKGATVVVGGDRDARGGTFVQPTLLSGATKDMKVAREETFAPLAPVFKFDTVEEVIELANDTEFGLAAYFFANDLRNVWKVTEALEYGMVGVNTGLISTELAPFGGVKQSGFGREGSKYGMDDFLSMKYVCMGGIGA
SIO_010081: AMC88_RS25845
subclass of: SO_0000673
so part of: AMC88_RS25845
location: 126442..127929
location: region:126442-127929:1
so has part: feature:126442-127929:1:exon

WP_008534338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126442-127929:1:exon

AMC88_RS25850
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25850
old locus tag: AMC88_PC00115
so part of: sequence
location: 128214..128399
location: region:128214-128399:1
so has part: feature:128214-128399:1:exon
subclass of: SO_0000010

45960448
type: Gene
SIO_000068: ncbigene

position:128214:1
position: 128214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128399:1
position: 128399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128214-128399:1:exon

AMC88_RS25850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25850
old locus tag: AMC88_PC00115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004668636.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNELLHRGVVVSTYRSPEQEHDHHPIDARVRPEIDQADDAARASVEGQAKAIRVNQRRVKV
SIO_010081: AMC88_RS25850
subclass of: SO_0000673
so part of: AMC88_RS25850
location: 128214..128399
location: region:128214-128399:1
so has part: feature:128214-128399:1:exon

WP_004668636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128214-128399:1:exon

AMC88_RS32410
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32410
pseudo: true
so part of: sequence
location: complement(<128468..129010)
location: region:128468-129010:-1
so has part: feature:128468-129010:-1:exon
subclass of: SO_0000010

45961645
type: Gene
SIO_000068: ncbigene

position:128468:-1
position: 128468
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:129010:-1
position: 129010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128468-129010:-1:exon

AMC88_RS32410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010847473.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: reverse transcriptase domain-containing protein
SIO_010081: AMC88_RS32410
subclass of: SO_0000673
so part of: AMC88_RS32410
location: complement(<128468..129010)
location: region:128468-129010:-1
so has part: feature:128468-129010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128468-129010:-1:exon

AMC88_RS32415
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32415
pseudo: true
so part of: sequence
location: complement(<129480..129930)
location: region:129480-129930:-1
so has part: feature:129480-129930:-1:exon
subclass of: SO_0000010

45961646
type: Gene
SIO_000068: ncbigene

position:129480:-1
position: 129480
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:129930:-1
position: 129930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129480-129930:-1:exon

AMC88_RS32415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014528241.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AMC88_RS32415
subclass of: SO_0000673
so part of: AMC88_RS32415
location: complement(<129480..129930)
location: region:129480-129930:-1
so has part: feature:129480-129930:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129480-129930:-1:exon

AMC88_RS25865
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25865
old locus tag: AMC88_PC00117
so part of: sequence
location: 130329..132338
location: region:130329-132338:1
so has part: feature:130329-132338:1:exon
subclass of: SO_0000010

45960449
type: Gene
SIO_000068: ncbigene

position:130329:1
position: 130329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132338:1
position: 132338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130329-132338:1:exon

AMC88_RS25865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25865
old locus tag: AMC88_PC00117
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489469.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MPKSIRLALSLIFVLLSLLAAGQGIVSIVKLLSIRSNISEVASNWLPSIDVINRINTITGDYRILQFRLVTNSSDSTSLAHNITTFRQKMEDLANARGEYEPMVTSGEERQAYDAFSALWTQYQEDGERIVKLMQAGKKDEAFALLTSDATTKLYNDSGALLDQDVAVNKRGGVAAVGNTMGAVSSTVLVTILAMALATTTGIIALLYCIRKITDPISRLTTTMGVLADGNLDTEVPFAMRADEIGKMSRAVEVFKQNSIKARDLNAQEAALQAKSADLQSSIAEVVSAAVAGDFTHRITKKYGDAALDRFAGSVNELVTSVDRGIAETRRVISALADGDLTENMCGEFQGAFGELKSNVNATMAALRSVLGEVRSAVDTINGGAGEMRIASGDLSKRTEQQAAALEETSSALEEITVAVKSSTERATEASHMVDEARRSTEQSSAVVKDAVAAMGRIEQASDEIGQIINVIDEIAFQTNLLALNAGVEAARAGDAGKGFAVVAQEVRELAQRSATAAKDIKALINRSGDEVKTGVRLVTATGDALGLIRGHVIKVNEHVHTISTAAREQSTGLAEVSTAVNQMDQTTQQNAAMVEESTAATNRLADEASNLARLIARFRLDGSTFVRRVAHQNGKPAASPARALSQKLAGAFGGRTTAAVATKEWEEF
SIO_010081: AMC88_RS25865
subclass of: SO_0000673
so part of: AMC88_RS25865
location: 130329..132338
location: region:130329-132338:1
so has part: feature:130329-132338:1:exon

WP_004673275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130329-132338:1:exon

AMC88_RS25870
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25870
old locus tag: AMC88_PC00118
so part of: sequence
location: 132860..133045
location: region:132860-133045:1
so has part: feature:132860-133045:1:exon
subclass of: SO_0000010

45960450
type: Gene
SIO_000068: ncbigene

position:132860:1
position: 132860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133045:1
position: 133045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132860-133045:1:exon

AMC88_RS25870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25870
old locus tag: AMC88_PC00118
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004673279.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKVIAINFGQQAKTDTHLESHEDAQSQRLEQERLQMIQITNHLEALYARLLTVCGDRPKN
SIO_010081: AMC88_RS25870
subclass of: SO_0000673
so part of: AMC88_RS25870
location: 132860..133045
location: region:132860-133045:1
so has part: feature:132860-133045:1:exon

WP_004673279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132860-133045:1:exon

AMC88_RS25875
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25875
old locus tag: AMC88_PC00119
so part of: sequence
location: complement(133116..134111)
location: region:133116-134111:-1
so has part: feature:133116-134111:-1:exon
subclass of: SO_0000010

45960451
type: Gene
SIO_000068: ncbigene

position:133116:-1
position: 133116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134111:-1
position: 134111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133116-134111:-1:exon

AMC88_RS25875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25875
old locus tag: AMC88_PC00119
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534360.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MTESLFSKPDEGTLVKDNFIEGSDPERLLPLISSPLASSDLAQHDSRSLNSRCSRISLDGFGVADAHHEGAFSVMIDSPVDVVTVFLPASGNAVFHWSGQQVESPHVANAPLNARQDGIRSQLSLTIDTQSLRDKLSRMLDRTISGNLQIQPTLDLASSAGTLMRELALSAHRGLSAGGALRQCPSAYSSLLDAIEYLLIESCMHRYTDELRRPSPSPTPRHVKRAMEFMEEHMAQPISLNDIAAAAKVSVRTLQHGFRQFRNTSPTMHLRDLRMCAARQELLQNGAKISVSEIALKWGFTHLGRFAAEYKRRYGELPSKTVHMMASPPES
SIO_010081: AMC88_RS25875
subclass of: SO_0000673
so part of: AMC88_RS25875
location: complement(133116..134111)
location: region:133116-134111:-1
so has part: feature:133116-134111:-1:exon

WP_004673281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133116-134111:-1:exon

AMC88_RS25880
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25880
so part of: sequence
location: 135307..136056
location: region:135307-136056:1
so has part: feature:135307-136056:1:exon
subclass of: SO_0000010

45960452
type: Gene
SIO_000068: ncbigene

position:135307:1
position: 135307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136056:1
position: 136056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135307-136056:1:exon

AMC88_RS25880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737426.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MIQASLTHKACHTPSTEVLVERDSDANISPGEKVCVLIGASNPVGLCLARSFIEKGYRVAVGDANPADFASLAEGQGNNFLPVKVNPNRDVYVNSMADQVYLRWRRVDVLVNIVFRRNETTQTVTGSLSSANLGLDAVSNLIRVTGAFSSRLQGAELAVVDVAWFEETTSLEAEAVLQAALRTTTSAIARQYFGSGLRINAVHASDVNSTSSSENDVLRTVIHAVQFLANSELSGKLTGNVLEIDPRCR
SIO_010081: AMC88_RS25880
subclass of: SO_0000673
so part of: AMC88_RS25880
location: 135307..136056
location: region:135307-136056:1
so has part: feature:135307-136056:1:exon

WP_011053351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135307-136056:1:exon

AMC88_RS25885
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25885
old locus tag: AMC88_PC00121
so part of: sequence
location: 136268..138781
location: region:136268-138781:1
so has part: feature:136268-138781:1:exon
subclass of: SO_0000010

45960453
type: Gene
SIO_000068: ncbigene

position:136268:1
position: 136268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138781:1
position: 138781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136268-138781:1:exon

AMC88_RS25885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25885
old locus tag: AMC88_PC00121
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053352.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing methyl-accepting chemotaxis protein
translation: MFVDRLLSTFTIRAKVLLVLVPLILILAAVGGVGLKATGLLQSRLRLSNEVLQTLSGFRSVAESMNRFLAQSSTEYRDEALTSLNGQSATMQSLQEAAAGSGSETGALENSVSAMSVISGSIGRMWSLHNDEESVRSDIVSNLSKIKEVGGALKLAAVDVRSQVRNQENSGKTMLREATRSLDTASVMQHMAEDLVSLPDGAKQPPTVAQQGLVIKKSLKTVKRVVSTADEQAVTKIERTIAKLIANPEFVDPSTRLAGSDLQSFATNLRVDAIQHMIEGTNAIRALDKALTDSEMLVATATTIGQDADSIEIEINNLFRTANAENQQRLVEQLTKLARDTVAVGGVASSISGFDKMQEDLFAQVDSIQENTEKLVKIAEARQAQYSEADKTGQEIWKNLVTFAATQENDARNESNLARLLSTIATVSGVLVALAAGAGLMATLRAPIERIAKRMQELAKGDLRSQIVGRDRRDEIGEMARALEVFRENAVSKMDIETRTEADRKTVEQERMDRERERAQMEEEVATAVTILGEALSRLARGDISQEIDRQFHPNLEPLRRDFNHSLSILRETVSHIDENTNQIQWGTSELFKASDDLSRRTELQAASLEEAAAAVEQVTVTVRKSSENAYETQAFVSVVKEHAEGAATIVTDAINAMGRIEDASHKIGQIIGLIDTIAFQTNLLALNAGVEAARAGDAGKGFAVVAQEVRELAQKSSAAAREIRHLISESSSEVAIGSDYVGKAGEALHNITASILKISDRIDQIVNSSREQAASLAEINNNVNVLDQGTQQNAAMAEQTNAAAKTLSDQTNELSERLASFKLTEDKSTRRVRLVA
SIO_010081: AMC88_RS25885
subclass of: SO_0000673
so part of: AMC88_RS25885
location: 136268..138781
location: region:136268-138781:1
so has part: feature:136268-138781:1:exon

WP_008534365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136268-138781:1:exon

AMC88_RS25890
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25890
old locus tag: AMC88_PC00122
so part of: sequence
location: 138966..140165
location: region:138966-140165:1
so has part: feature:138966-140165:1:exon
subclass of: SO_0000010

45960454
type: Gene
SIO_000068: ncbigene

position:138966:1
position: 138966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140165:1
position: 140165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138966-140165:1:exon

AMC88_RS25890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25890
old locus tag: AMC88_PC00122
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534366.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MLRDTRGIKSVRIREITRAIILITGLVIPSVAAAGGLTELPREERKTYELLDPKLPTGESVFRTFKAQRAPPWKIGYASTYADNSWRASILDEFTNKIVPAFKKAGLVSEFIVTQSNLEDAVQIRQMRQMVDDGVDAIIICCSNLTALNPTIEYAYSKGVPVFSYSGYVTSPFAVNATENNMQGGFEAAKWLAEEIEGSGNVLLVSGISGFASSDSFDVGAKKALEYYPEIKIVGHVDGKWTDKVAQAEVQKFLAANPGRIDGIIVQSGAENGVINAVRQSGRDMIPIVLGGEASAACYWRRNPDFVSKSFHFWPPRSEAGFVWDVMMRTLEGQGPKIQTILRPAIPSTIEDVMAVLPADCDPNSEDWIEPKNTAWWSASAAAKYFDNPADPLSWKPAD
SIO_010081: AMC88_RS25890
subclass of: SO_0000673
so part of: AMC88_RS25890
location: 138966..140165
location: region:138966-140165:1
so has part: feature:138966-140165:1:exon

WP_018247148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138966-140165:1:exon

AMC88_RS25895
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25895
old locus tag: AMC88_PC00123
so part of: sequence
location: 140597..143155
location: region:140597-143155:1
so has part: feature:140597-143155:1:exon
subclass of: SO_0000010

45960455
type: Gene
SIO_000068: ncbigene

position:140597:1
position: 140597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143155:1
position: 143155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140597-143155:1:exon

AMC88_RS25895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25895
old locus tag: AMC88_PC00123
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737428.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MNSTLQPLWQRSFFQKRRNRRRDEALHHDTSADRGALLEALIGVLPLPIFFKDLHGRYVGCNKVFEDLLGRSRDEIIGNTDFDLSSTQLAEIYSIEEKGLLERGGAQVSERKIALANGAILDVVCNKAVFRGHDDEPAGLIGVIIDITEHKLAEQELKNALELAQGIVTAIPDVLFEVDEDGRYLQVWTRNPELLAQQREMLLGRTVDQVLAPDQAAIAMEALRTASSEGVAYGRCISVSLPNGETRWFELSVARRPSADPDAATTLLAFSRDVTERRQAEDAINSVRTQLLSVLQTIPDMVWVKNVDGVHLLCNHAFERLTGKSEAEVVGKTDLELFGAERAHISGKSDEATIEAGGILIDENWVVSPENGQSILLETRKLAVLGAGGEVTGVLGVSRDVTELNASREKIRQMAFYDPVTSLPNRLLFNERLQKVVSDASSQRRRTGVMLIDIDHFKVVNDTMGHPVGDQLLCQVATRLKKSVRDLDTVARLGGDEFAILLPEIQTTDDLDWVACSILERFKESFLLDGKEVYVSCSVGIAISPDDSTDVNDLVKYADSAMYLAKRSGRNSFRFYSKDLTVGVEERMQLESELRRAIEREELELHYQPKVLLDSGVMIGSEALLRWPHPEMGMIPPVRFIPVAEDTGLIVELGRWVLREACKTAKELNADCHHLHKIAVNLSGKQFQCSRLVNEIAAILGETGCRAEWIEIEITESLLLDRKGETLQTLLKLRQMGFSIAIDDFGTGYSALNYLARFPIDTLKIDRSFINSSDKRNEELVKAILSIAQCLGQDVVAEGVETAEQAAFLAANGCGSAQGFFYSKALPKMELIALWVRASATGFVSDRYAASR
SIO_010081: AMC88_RS25895
subclass of: SO_0000673
so part of: AMC88_RS25895
location: 140597..143155
location: region:140597-143155:1
so has part: feature:140597-143155:1:exon

WP_004673285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140597-143155:1:exon

AMC88_RS25900
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25900
old locus tag: AMC88_PC00124
so part of: sequence
location: 143496..144392
location: region:143496-144392:1
so has part: feature:143496-144392:1:exon
subclass of: SO_0000010

45960456
type: Gene
SIO_000068: ncbigene

position:143496:1
position: 143496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144392:1
position: 144392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143496-144392:1:exon

AMC88_RS25900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25900
old locus tag: AMC88_PC00124
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534368.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MSLSMHHLAKLPYFYPFEFGDGKITVLSDGPLELGDPRLNFLGVEPRTVSLMLEDNFLPTNKVVLEQNVPLVEINGRTILFDTGMGSSKAFGPTTGRLLASLREAGRDPTEIDAVVLSHAHIDHIGGLCDANGRLNFPNADIFISERDFTDWTDGSSIDSSFQFQIDNARRNLLPHKDRTFFFKDGEEFLPGVHAISAPGHTLGHHCFMLQSGNDRLCFLGDLTHHHILLMERPMMEFRYDTDPKLSARSRTRVLDMLATDRIAVMSYHFAWPGAGHVVRNGDGFRYIPSPMQLLAHR
SIO_010081: AMC88_RS25900
subclass of: SO_0000673
so part of: AMC88_RS25900
location: 143496..144392
location: region:143496-144392:1
so has part: feature:143496-144392:1:exon

WP_237350508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143496-144392:1:exon

AMC88_RS25905
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25905
old locus tag: AMC88_PC00125
so part of: sequence
location: 144405..145532
location: region:144405-145532:1
so has part: feature:144405-145532:1:exon
subclass of: SO_0000010

45960457
type: Gene
SIO_000068: ncbigene

position:144405:1
position: 144405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145532:1
position: 145532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144405-145532:1:exon

AMC88_RS25905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25905
old locus tag: AMC88_PC00125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004673287.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc-dependent alcohol dehydrogenase family protein
translation: MQMRSVILRESGLPKPYSNSKPLKIELVELTPPGPMEVLVKIKAAGVCHSDLSAINGDRPRPLPVALGHEASGVVAAIGPSVEKVEVGDHVVMSFLPVCGHCSYCAEGRASLCEPGYQANAAGTLLSGGKHIRLRGYEINHHSGVSAFSEYAVVSASSVVKVTKDIDLATAALFGCAVMTGVGAVMNTCGVRPGRSVAVIGLGGVGLSAILGAVASGASDIVAIDLIQAKLDLAKELGATKTFLATSPNIVAQVKGATSGGVDYAIEMAGSKKAFELAYEITRRGGMTATAGLASANSRFEVSPLPLVGEERTIKGSYMGSCVPSRDIPRYIDLYLKGKLPVDKLLSSTGPLDEINEVFDRLDRAEINRHLVLMD
SIO_010081: AMC88_RS25905
subclass of: SO_0000673
so part of: AMC88_RS25905
location: 144405..145532
location: region:144405-145532:1
so has part: feature:144405-145532:1:exon

WP_004673287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144405-145532:1:exon

AMC88_RS25910
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25910
old locus tag: AMC88_PC00126
so part of: sequence
location: 145550..146326
location: region:145550-146326:1
so has part: feature:145550-146326:1:exon
subclass of: SO_0000010

45960458
type: Gene
SIO_000068: ncbigene

position:145550:1
position: 145550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146326:1
position: 146326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145550-146326:1:exon

AMC88_RS25910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25910
old locus tag: AMC88_PC00126
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004673289.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acyl homoserine lactonase family protein
translation: MNEWTVLAIHYGTAQRPVSDLILETNDIHDRPSQIDYFVWLIRLEDRLILVDTGFEAGEGAARGRTLLIHPVAALSSLGIKSSEITDVVVTHLHYDHAGNLPAFPNATFHIQDREMAYGTGRCMCHERMRRPFATEGVVDAVRLVFQSRVRFHDGDGEIVPGCRVHLVGGHSKGLQVVTVATGGALLVIASDALHFQHYLENDGAFPLFADYLEVIEGYNKLRVLAGANGLIIPGHDPEVLQKFSPLAPDLQFARVLL
SIO_010081: AMC88_RS25910
subclass of: SO_0000673
so part of: AMC88_RS25910
location: 145550..146326
location: region:145550-146326:1
so has part: feature:145550-146326:1:exon

WP_004673289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145550-146326:1:exon

AMC88_RS25915
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25915
old locus tag: AMC88_PC00127
so part of: sequence
location: 146447..147136
location: region:146447-147136:1
so has part: feature:146447-147136:1:exon
subclass of: SO_0000010

45960459
type: Gene
SIO_000068: ncbigene

position:146447:1
position: 146447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147136:1
position: 147136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146447-147136:1:exon

AMC88_RS25915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25915
old locus tag: AMC88_PC00127
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737430.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GntR family transcriptional regulator
translation: MGTIDLQIRRQNASLRILVEDKLRQAISSGRFKPGQRLVERELCELIGVGRTSVREALRQLEAEGLITSYPHRGPVVSTISYEEARQLYSVRALLESFAGQEFAENGSNEEIVALLETVEAFEAAAKSGSGTRIIEAKTAFYDCLMTGSKNVFVKQMLTSLHNRVTLLRMTSMTQPGRLQNSVFEIREIAAAIALRDGDRAAALCKRHIEIAAKVALDYLSKNPVETSE
SIO_010081: AMC88_RS25915
subclass of: SO_0000673
so part of: AMC88_RS25915
location: 146447..147136
location: region:146447-147136:1
so has part: feature:146447-147136:1:exon

WP_004673291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146447-147136:1:exon

AMC88_RS25920
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25920
old locus tag: AMC88_PC00128
so part of: sequence
location: 147266..148495
location: region:147266-148495:1
so has part: feature:147266-148495:1:exon
subclass of: SO_0000010

45960460
type: Gene
SIO_000068: ncbigene

position:147266:1
position: 147266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148495:1
position: 148495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147266-148495:1:exon

AMC88_RS25920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25920
old locus tag: AMC88_PC00128
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534369.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta hydrolase
translation: MGAHAELIKRVTLAIEDPELPRLTPGLTTRISLQVGPEKSSLAVGGGIVALDGADENADVILSAPEGAWEKVMQVPPPATYHSFTAFQLANPEFTLSGSPVAIAQARPALERLFEIVVASPPLVAPKVDRNIEQVTGRYKRVEVGGVEHDIFYEEAGAGTPILFLHTAGADGRQFLPQLSDTGFARTNRLISVDLPFHGRSMPPLTWDGSPYQLTTDLYLTWCTAILDQLVGDRAIVVGGSMGAAMCMVLAAERPERLMGVIAVEPPLKSKGRRNPFQHNVNVHGSLHNSAYVRGIMSPLSPQEERRRASWIYSQGAPGVYPGDLSFYSDEFDGAVVGPKIDAKRTPTVLLSGTYDYSATPADGAALAALIPGSRHVVMEGLGHFPMCENPDYFRSFLQDAIRFVEDNG
SIO_010081: AMC88_RS25920
subclass of: SO_0000673
so part of: AMC88_RS25920
location: 147266..148495
location: region:147266-148495:1
so has part: feature:147266-148495:1:exon

WP_008534369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147266-148495:1:exon

AMC88_RS25925
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25925
pseudo: true
so part of: sequence
location: 148685..>149716
location: region:148685-149716:1
so has part: feature:148685-149716:1:exon
subclass of: SO_0000010

45960461
type: Gene
SIO_000068: ncbigene

position:148685:1
position: 148685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149716:1
position: 149716
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148685-149716:1:exon

AMC88_RS25925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558307.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: AMC88_RS25925
subclass of: SO_0000673
so part of: AMC88_RS25925
location: 148685..>149716
location: region:148685-149716:1
so has part: feature:148685-149716:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148685-149716:1:exon

AMC88_RS25930
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25930
old locus tag: AMC88_PC00131
so part of: sequence
location: complement(150208..150975)
location: region:150208-150975:-1
so has part: feature:150208-150975:-1:exon
subclass of: SO_0000010

45960462
type: Gene
SIO_000068: ncbigene

position:150208:-1
position: 150208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150975:-1
position: 150975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150208-150975:-1:exon

AMC88_RS25930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25930
old locus tag: AMC88_PC00131
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004671535.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIGNHLVK
SIO_010081: AMC88_RS25930
subclass of: SO_0000673
so part of: AMC88_RS25930
location: complement(150208..150975)
location: region:150208-150975:-1
so has part: feature:150208-150975:-1:exon

WP_004671535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150208-150975:-1:exon

AMC88_RS25935
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25935
old locus tag: AMC88_PC00132
so part of: sequence
location: 151110..151619
location: region:151110-151619:1
so has part: feature:151110-151619:1:exon
subclass of: SO_0000010

45960463
type: Gene
SIO_000068: ncbigene

position:151110:1
position: 151110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151619:1
position: 151619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151110-151619:1:exon

AMC88_RS25935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25935
old locus tag: AMC88_PC00132
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004671533.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flavin reductase family protein
translation: MADTSTEAQLAFKAAMRRFTSTICLITTELNGVRHGMAATAVQSVTADPPTVLVCINQSASVNQPLKISGKFAVNMLHLSHADLVPLFSGQLKGEERFHYGEWLSLDGMPVLSDAQAAFVCKLKDVVHVGTHDVVLGEVLEARFIESIAPLLYENGQLVRSSSISGSAA
SIO_010081: AMC88_RS25935
subclass of: SO_0000673
so part of: AMC88_RS25935
location: 151110..151619
location: region:151110-151619:1
so has part: feature:151110-151619:1:exon

WP_008534378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151110-151619:1:exon

AMC88_RS25940
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25940
old locus tag: AMC88_PC00133
so part of: sequence
location: 151692..152099
location: region:151692-152099:1
so has part: feature:151692-152099:1:exon
subclass of: SO_0000010

45960464
type: Gene
SIO_000068: ncbigene

position:151692:1
position: 151692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152099:1
position: 152099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151692-152099:1:exon

AMC88_RS25940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25940
old locus tag: AMC88_PC00133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004671531.1
GO function: GO:0051920 - peroxiredoxin activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxymuconolactone decarboxylase family protein
translation: MAPAREIHGREVTERFERGLKTRREVLGGAYVDASVSKATDFNWPMQTLVTEYCWDAIWNRPGLERKQRSILNLGMISALNRPHELKLHVRGAINNGLTKEEIREVFLQVSIYCGVPAAIDSFRVAAEVFDEMGI
SIO_010081: AMC88_RS25940
subclass of: SO_0000673
so part of: AMC88_RS25940
location: 151692..152099
location: region:151692-152099:1
so has part: feature:151692-152099:1:exon

WP_008534380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151692-152099:1:exon

AMC88_RS25945
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25945
old locus tag: AMC88_PC00134
so part of: sequence
location: 152160..153281
location: region:152160-153281:1
so has part: feature:152160-153281:1:exon
subclass of: SO_0000010

45960465
type: Gene
SIO_000068: ncbigene

position:152160:1
position: 152160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153281:1
position: 153281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152160-153281:1:exon

AMC88_RS25945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25945
old locus tag: AMC88_PC00134
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018328913.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LLM class flavin-dependent oxidoreductase
translation: MTAQDDFRAAGNPMFNDNKLKLGVFGTNCSNACAITLAETTFEPTFDHNVEIAKKLEAAGWECMVPIARWRGFGGPSNFNGVNMDTFTWAAALAAVTTKLQFFSTTHIPTLNPIVATKMATTIDHISKGRYGLNLVTGWFTPEMEMFGVPMMEHDTRYEYATEWMDIVETLWKRNGVTFEGEFLKVKDAFSEPKPYNKAGRPLLICAGASGKGLHFTAKFCDFNFGFMQDMESGAAWVKKVKDLARTEYNRDLGTFTACPVIVRETEKEAKEYYDYYVNQKGDWEACENICEVLQVQSQNHSAEMYQKFKERFVAGWGGYPIVGNPEQVADKLVDLSNTGVNGALLTMVDYNEELPFFNDRVMPLLKQAGLRN
SIO_010081: AMC88_RS25945
subclass of: SO_0000673
so part of: AMC88_RS25945
location: 152160..153281
location: region:152160-153281:1
so has part: feature:152160-153281:1:exon

WP_011053356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152160-153281:1:exon

AMC88_RS25950
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25950
old locus tag: AMC88_PC00135
so part of: sequence
location: 153405..154574
location: region:153405-154574:1
so has part: feature:153405-154574:1:exon
subclass of: SO_0000010

45960466
type: Gene
SIO_000068: ncbigene

position:153405:1
position: 153405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154574:1
position: 154574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153405-154574:1:exon

AMC88_RS25950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25950
old locus tag: AMC88_PC00135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737432.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MLKKIVAALFTLSSLYHMNGVAKADGLDSLPPDQKALYENIDPAIPLGGTVYKDFVPKRPPPWKIGYASTYAGNTWRANILDEFTNVLLPKYKEAGLVSDLIVTQSDLKDAVQIQQMRQMVDDGVDAIVICCSNITALNKTIEYAHSKGVPVFSVSGYVTSPYAINATENNTDGGYKAAEWLAKEIGEKGNVLMVSGIPGFASSDSFDIGAKNAFDKFPGIKIVGTIAGKWTDQVAQVEVQKFLATNLAEVNGILVQSASENGVVNAVQQSGRDMMPIVLGGEASAACYWRKNPDFISKSFHFWPPRSDARLVWDVMMRTLEGQGPKIQSILRPALPYTIDDVKEVLKEDCDPNSTDWIEPKNNGWWPADVAANYFERPEDPLAWRPKK
SIO_010081: AMC88_RS25950
subclass of: SO_0000673
so part of: AMC88_RS25950
location: 153405..154574
location: region:153405-154574:1
so has part: feature:153405-154574:1:exon

WP_008534383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153405-154574:1:exon

AMC88_RS25955
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25955
old locus tag: AMC88_PC00136
so part of: sequence
location: 154652..155869
location: region:154652-155869:1
so has part: feature:154652-155869:1:exon
subclass of: SO_0000010

45960467
type: Gene
SIO_000068: ncbigene

position:154652:1
position: 154652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155869:1
position: 155869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154652-155869:1:exon

AMC88_RS25955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25955
old locus tag: AMC88_PC00136
EC number: 2.6.1.83
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053357.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LL-diaminopimelate aminotransferase
translation: MGNSVLDFHRIQRLPPYVFEQVNRLKASARAGGADIIDLGMGNPDLPTPQSIVDKLCEVVQDPRTHRYSSSKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPTYPIHAFGFLMAGGVIRSMSVEPDESFFPPLERAVRHSIPKPLALILNYPSNPTALVATLDFYKDVVAFAKKHDIIVLSDLAYSEIYFDGAPPPSVLEVPGAMDVTVEFTSMSKTFSMPGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATHALNGDGSDIAEVRNVYKRRRDVMVESFGKAGFDVPPPAATMFAWAKIPEKFRHLGSLEFSKLLVEKADVAVAPGIGFGEMGDDYVRLALVENEHRIRQAARNIKRWLSGDEKFEINVMNQ
SIO_010081: AMC88_RS25955
subclass of: SO_0000673
so part of: AMC88_RS25955
location: 154652..155869
location: region:154652-155869:1
so has part: feature:154652-155869:1:exon

WP_026188837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154652-155869:1:exon

AMC88_RS32435
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32435
so part of: sequence
location: 155881..156279
location: region:155881-156279:1
so has part: feature:155881-156279:1:exon
subclass of: SO_0000010

45961647
type: Gene
SIO_000068: ncbigene

position:155881:1
position: 155881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156279:1
position: 156279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155881-156279:1:exon

AMC88_RS32435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009987854.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GFA family protein
translation: MPIFGSCQCKAVTYQVQEIDGPMWNCFCQTCRKSHAADHNTAAKVKSEHFKILTGQDTLHSFESTPGKLRWFCSVCGSHVYAERPASPELKVVRAGTFDTDPGSVPMSNVWVSHAEPWLAHDPSKASSPEFP
SIO_010081: AMC88_RS32435
subclass of: SO_0000673
so part of: AMC88_RS32435
location: 155881..156279
location: region:155881-156279:1
so has part: feature:155881-156279:1:exon

WP_010029274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155881-156279:1:exon

AMC88_RS25960
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25960
old locus tag: AMC88_PC00137
so part of: sequence
location: 156640..157158
location: region:156640-157158:1
so has part: feature:156640-157158:1:exon
subclass of: SO_0000010

45960468
type: Gene
SIO_000068: ncbigene

position:156640:1
position: 156640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157158:1
position: 157158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156640-157158:1:exon

AMC88_RS25960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25960
old locus tag: AMC88_PC00137
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489472.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-dependent oxidoreductase
translation: MKVVVITGNLSRPSKTRAVADFMVDRVRASGNEASCWDLVDLHPHLGATVLPSSAAEIVKAALNDILASDVLVVGSPVYKASYTGLLKHLFDLVDMKALKGRYVIPFATGKASSHKPLVEASMEALFDFFEAQIHSRFIFALDEDFQNDALSENLRALVDRELDAARRAVSP
SIO_010081: AMC88_RS25960
subclass of: SO_0000673
so part of: AMC88_RS25960
location: 156640..157158
location: region:156640-157158:1
so has part: feature:156640-157158:1:exon

WP_004671524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156640-157158:1:exon

AMC88_RS25965
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25965
old locus tag: AMC88_PC00138
so part of: sequence
location: 157175..158455
location: region:157175-158455:1
so has part: feature:157175-158455:1:exon
subclass of: SO_0000010

45960469
type: Gene
SIO_000068: ncbigene

position:157175:1
position: 157175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158455:1
position: 158455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157175-158455:1:exon

AMC88_RS25965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25965
old locus tag: AMC88_PC00138
EC number: 3.5.4.25
EC number: 4.1.99.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004671523.1
GO function: GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
translation: MSFSSIDEAIEAIEAGEMVIVVDDENRENEGDLVVAAEKITAEHIAFMMKYARGLICVPLPAERLDKLEIPLMVTRNSDSLQTAFTVSVDCKHGTTTGISAEDRAATVKSLIDPQTRPEDLSRPGHIFPLRANRLGVLGRPGHTEAAVDLARLAGLAPAGVICEIANDDGTMSRLPDLEKFAIEHGLHIVTIEALIEYCRSRDTRVKRYAQSFMPTRFGDFKAIAYRDSLTGTEHLALTLGELCEKEDVLVRVHSECLTGEAFRSMRCDCGQQLEMALRAVQLAGAGCVIYMRGQEGRGIGLGNKIAAYSLQDHGRDTLEANRELGFASDSREYNAAADIIRDLGIGSVRLLTNNPTKIEALRTSGVIVSSRQSLIAASSASNITYFKTKRDRFGHLLDQDTSAEHVGRSNVFSVFGAQVFSGPLG
SIO_010081: AMC88_RS25965
subclass of: SO_0000673
so part of: AMC88_RS25965
location: 157175..158455
location: region:157175-158455:1
so has part: feature:157175-158455:1:exon

WP_040111783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157175-158455:1:exon

AMC88_RS25970
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25970
old locus tag: AMC88_PC00139
so part of: sequence
location: complement(158692..159798)
location: region:158692-159798:-1
so has part: feature:158692-159798:-1:exon
subclass of: SO_0000010

45960470
type: Gene
SIO_000068: ncbigene

position:158692:-1
position: 158692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159798:-1
position: 159798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158692-159798:-1:exon

AMC88_RS25970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25970
old locus tag: AMC88_PC00139
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489473.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent alcohol dehydrogenase
translation: MKQAYAAVSREKAKPLILECIGIEEPRADEILVRIVASGVCHTDLVVRDQGYDVPQPVVLGHEGSGVVEAVGSAVKDLVPGDHVALSYAYCGKCEKCLSGTPFYCEDFFGRNFRGTRPDGTCPIHDSHGKQISGCFFEQSSFATYAIASERNAVKVAKDVPLELIGPLGCGLQTGAGAVLNCLKPKPGSSIAVFGAGAVGMAATMAAKIAGCATIIVIDLNDERLELSRELGATHTINARKLDSVAAIRKIVPAGVDFSLECTSSPRVFRQAVDCLGTPGTCGLVGSSALGTEGTIDIGNFLFGRTLIGVVEGQSVPSEFVPQLIEYWQQGLFPFDKLVQFYDLDQINEAMADSESGKVIKPILRMKH
SIO_010081: AMC88_RS25970
subclass of: SO_0000673
so part of: AMC88_RS25970
location: complement(158692..159798)
location: region:158692-159798:-1
so has part: feature:158692-159798:-1:exon

WP_004671520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158692-159798:-1:exon

AMC88_RS25975
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25975
old locus tag: AMC88_PC00141
so part of: sequence
location: complement(160163..160792)
location: region:160163-160792:-1
so has part: feature:160163-160792:-1:exon
subclass of: SO_0000010

45960471
type: Gene
SIO_000068: ncbigene

position:160163:-1
position: 160163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160792:-1
position: 160792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160163-160792:-1:exon

AMC88_RS25975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25975
old locus tag: AMC88_PC00141
EC number: 5.4.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489474.1
GO function: GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
translation: MSTLVIVRHGQSEGNARGEFTGTSDVPLTQEGWSESRRAGSLLANLGISFDIAFSSALLRTVDTCRAILNETNGDLLEPIRRTELNERDYGQLTGINKNVARERWGQDVVQVWRRSYSTPPPGGESIRDISARVLPFLISEVFPPLLRGKSVLVVAHGNTIRSLKQGIERLTIQDTLAIESPTAAPTVYRIASDLSIIEKTNVLVGTVC
SIO_010081: AMC88_RS25975
subclass of: SO_0000673
so part of: AMC88_RS25975
location: complement(160163..160792)
location: region:160163-160792:-1
so has part: feature:160163-160792:-1:exon

WP_008534389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160163-160792:-1:exon

AMC88_RS25980
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25980
old locus tag: AMC88_PC00142
so part of: sequence
location: 161048..162136
location: region:161048-162136:1
so has part: feature:161048-162136:1:exon
subclass of: SO_0000010

45960472
type: Gene
SIO_000068: ncbigene

position:161048:1
position: 161048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162136:1
position: 162136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161048-162136:1:exon

AMC88_RS25980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25980
old locus tag: AMC88_PC00142
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018328889.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: substrate-binding domain-containing protein
translation: MKRRTFLQASGAIAVAGTFGMPGILRADDAISLLPDTWPSEGANPIVDAGKFKKSGPWKIGHSHYGLAGSTHTYQTAFEAEYEIKKNKDRIADYQFRSADLNASKQVADIEDLIAQKVDAIIIAPLTTGSAVEGIKKAKAAGIPTVVYLGRVDTEEFTVQVQGDDFYFGRVMAQFLVDKLGNKGKVWVLRGVAGHPIDADRYAGAMEVFSKSGLQITSTQHGSWSYEDSKKIAESLYLSDPDVAGIWTDGANMSLGVLDALQEAGASTIPPITGEALNGWMRRWNDEKLSSIGPICPPALSTAALRAAFALLDGKPIQRNWTNRPKPITDETLSQFYRADLTDAYWAPTEMPNEKLLDYFKA
SIO_010081: AMC88_RS25980
subclass of: SO_0000673
so part of: AMC88_RS25980
location: 161048..162136
location: region:161048-162136:1
so has part: feature:161048-162136:1:exon

WP_004671515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161048-162136:1:exon

AMC88_RS25985
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25985
old locus tag: AMC88_PC00143
so part of: sequence
location: 162192..163721
location: region:162192-163721:1
so has part: feature:162192-163721:1:exon
subclass of: SO_0000010

45960473
type: Gene
SIO_000068: ncbigene

position:162192:1
position: 162192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163721:1
position: 163721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162192-163721:1:exon

AMC88_RS25985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25985
old locus tag: AMC88_PC00143
EC number: 7.5.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737438.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar ABC transporter ATP-binding protein
translation: MSTLVEMVGINKSFGFTKVLSDVRFSLERGSVHALMGENGAGKSTLMRILAGVYQPGAGSVRLRGEEVNFRSPKEARLAGVSTVFQEFTLIPNLTVAENMFLGHEPRRIDGSIDSVEVVKRARALLADVFPQLDATAIVETLTVAQQQAVEIAKGLTSNADVFIFDEPTAALNSTDVAHLFKVIRDLKAQHKAVVYISHRMNEVFELCDTITVMKDGAWVRTARAQDFNLQTLVATMVGRELQNFFPPRSQATGAAMLEVSDLRLDDSSSTVTFVVRKGEIIGLAGLEGQGQREIMRAIVGVESPKAIAVWRAGPDNSMHVVNVGSGFARAVASGIGFIPEDRKQEGLFLRLPIYDNIALGKQLNRNMASVAWRSVSRVREVIKSLRVAAADPNAPVGKLSGGNQQKVLLGRWLLSGVDILVIEEPTRGVDVGAKAEIYRLLRDFSDRGGAVVVSSREHAELIGLCDSILVVHDRKIVGQMSAEGATEERILETALGASASPDPRAAVH
SIO_010081: AMC88_RS25985
subclass of: SO_0000673
so part of: AMC88_RS25985
location: 162192..163721
location: region:162192-163721:1
so has part: feature:162192-163721:1:exon

WP_004671513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162192-163721:1:exon

AMC88_RS25990
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25990
old locus tag: AMC88_PC00144
so part of: sequence
location: 163734..164675
location: region:163734-164675:1
so has part: feature:163734-164675:1:exon
subclass of: SO_0000010

45960474
type: Gene
SIO_000068: ncbigene

position:163734:1
position: 163734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164675:1
position: 164675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163734-164675:1:exon

AMC88_RS25990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25990
old locus tag: AMC88_PC00144
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004671512.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MNSFASRLKLPYRAGAIGLSIGTLLVMVVASVILLPDFMDPENLSNLLAQSTVLVISALGQTFVILTGGLDVSVGSVISLTTTIMTLDLPEITRVLICIAVAMGFGVANGYGVARLNVHPIIMTLTTMGIGQGIALIILPIPGGRVPEWLSGSVAGSIGPVPNSLFWLITASLFASWILYRRPFGLYLFASGGNDFNARMNGVPVERTIIKAYVLSALFACAAGMFLAGRLASGDPKGGASFGIESVTAAALGGVHLAGGIGSIVGTVVGAAILGTVNNVMNLANVSAFLQSVVKGVLLLVLVVSQRRKTIGL
SIO_010081: AMC88_RS25990
subclass of: SO_0000673
so part of: AMC88_RS25990
location: 163734..164675
location: region:163734-164675:1
so has part: feature:163734-164675:1:exon

WP_004671512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163734-164675:1:exon

AMC88_RS25995
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS25995
old locus tag: AMC88_PC00145
so part of: sequence
location: 164822..165679
location: region:164822-165679:1
so has part: feature:164822-165679:1:exon
subclass of: SO_0000010

45960475
type: Gene
SIO_000068: ncbigene

position:164822:1
position: 164822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165679:1
position: 165679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164822-165679:1:exon

AMC88_RS25995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS25995
old locus tag: AMC88_PC00145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018247153.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSATLINPNYWFVILKQSAPLGIAVLAQSLVMRVRSIDLSVSGIFAFAIYLASSGQLNNYPPLMTVLMPVVIGLAVGGVNGILVAYVRASAVISTLSVSAILIGIVQYMSAGRAPGSTPSWLRILTSGNIHGLSYSVVLWIVIAALISIAFRFLIVGRYFRAVGDNPRAAETTGIPLARTIFVSHTLAGALTGIAALVQVSALAVGTIKPGFDTFMNALAATILGGVTFGVDRGGVAGPFVAVVAFSFLFAMLTVFGIQEPGKLIVQGVIIAFAAIIYGARAGRV
SIO_010081: AMC88_RS25995
subclass of: SO_0000673
so part of: AMC88_RS25995
location: 164822..165679
location: region:164822-165679:1
so has part: feature:164822-165679:1:exon

WP_237350509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164822-165679:1:exon

AMC88_RS26000
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26000
old locus tag: AMC88_PC00146
so part of: sequence
location: 165738..166841
location: region:165738-166841:1
so has part: feature:165738-166841:1:exon
subclass of: SO_0000010

45960476
type: Gene
SIO_000068: ncbigene

position:165738:1
position: 165738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166841:1
position: 166841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165738-166841:1:exon

AMC88_RS26000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26000
old locus tag: AMC88_PC00146
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004671507.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent alcohol dehydrogenase
translation: MVKITAAVAVKPKSPLEFRELELADPEGNEILVRTVASGICHTDLLLRDGIFGPPAPVIPGHEGVGVVEAVGPEVQSLKVGDHVALSQSSCGFCADCRRSHPMNCQNYTQYNLTGLRPNGKKALLCDEVGIGSNFVGQSSFATHILATENNAALLPKTDLDLTDAAPLGCGMATGAGTVINAMKPEIGSTIAVFGAGAVGMAAVMAAKVRRCSKIIIIDLNQQRLDMAMGLGATHAINGKDPDVVNQIHALTGGGADFAIDAVGIIPVILNSIKCTRAGGHVVLLGLDALGNDIPIPLDLMVFNRKIQGAILGDQIPQLFIPQMMDLNQAGLFPFQKLITKYPFEKINEAIADAEAGRVIKPVVVFN
SIO_010081: AMC88_RS26000
subclass of: SO_0000673
so part of: AMC88_RS26000
location: 165738..166841
location: region:165738-166841:1
so has part: feature:165738-166841:1:exon

WP_004671507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165738-166841:1:exon

AMC88_RS26005
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26005
old locus tag: AMC88_PC00147
so part of: sequence
location: 166854..167165
location: region:166854-167165:1
so has part: feature:166854-167165:1:exon
subclass of: SO_0000010

45960477
type: Gene
SIO_000068: ncbigene

position:166854:1
position: 166854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167165:1
position: 167165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166854-167165:1:exon

AMC88_RS26005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26005
old locus tag: AMC88_PC00147
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004671505.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antibiotic biosynthesis monooxygenase
translation: MTSKKSEEQHLVVEFKTTSQNRNRVKELLQEFIGPAREESGCLYYDLYQRSDDPNTFIILDGWQNEAAVVGHGEHPNVKRVLEPLLPLLVSPPSINVNTRISD
SIO_010081: AMC88_RS26005
subclass of: SO_0000673
so part of: AMC88_RS26005
location: 166854..167165
location: region:166854-167165:1
so has part: feature:166854-167165:1:exon

WP_004671505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166854-167165:1:exon

AMC88_RS26010
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26010
old locus tag: AMC88_PC00148
so part of: sequence
location: 167229..168494
location: region:167229-168494:1
so has part: feature:167229-168494:1:exon
subclass of: SO_0000010

45960478
type: Gene
SIO_000068: ncbigene

position:167229:1
position: 167229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168494:1
position: 168494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167229-168494:1:exon

AMC88_RS26010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26010
old locus tag: AMC88_PC00148
EC number: 1.6.5.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004671504.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MDTHRVVVVGGGFAGLQLAKDLKCPDTSITIVDRRNHHLFQPLLYQVATTVLATSEIAWPIRALFRGRKDVSTLLGEVVGVDTEARVVSLKDGNAIPYDTLVLATGARHAYFGRDEWEPFAPGLKALEDATTIRRRLLLAFEKAELEADPERRKAMLTFSIIGAGPTGVEMAGIIAQLAQRTLVEEFRSIDTRSARILLIEAGPRVLPVFPEALSRYAEQSLIKMGVEVRTGIPVTACNENGIAIGDEFVSSRTVIWAAGVQASNAAAWVGAEKDRAGRAVVQPDLTVGGKPEIFIIGDTASVKAADGTPVPGVAPAAKQQGKYVASVIEARRLGTPTPSAFRYRHLGNLATIGPNSAVIDFGKIRLKGGIAWWIWGLAHIYFLIGTRSRLAVGLSWLWIFVSGHHSARLITQKETLKDEV
SIO_010081: AMC88_RS26010
subclass of: SO_0000673
so part of: AMC88_RS26010
location: 167229..168494
location: region:167229-168494:1
so has part: feature:167229-168494:1:exon

WP_004671504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167229-168494:1:exon

AMC88_RS26015
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26015
old locus tag: AMC88_PC00149
so part of: sequence
location: 168791..169756
location: region:168791-169756:1
so has part: feature:168791-169756:1:exon
subclass of: SO_0000010

45960479
type: Gene
SIO_000068: ncbigene

position:168791:1
position: 168791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169756:1
position: 169756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168791-169756:1:exon

AMC88_RS26015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26015
old locus tag: AMC88_PC00149
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534397.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MSPSKIDHFSLKGTCSEELAAALSRLSPQSEAHVHGDKTIAYDVHAITNGPIAVIAAHYEGDLTVQHRGPAEANIIMLPLHGRSVVTVDGRQIPSEGTRGVFVNSMSASTTQFIGPRKHLGLRIAHDELTRRLGCRLNTPIRGSLDFSPEIDLSVGFGSLLVQLVPVLYAGLRDGTLLQSPIALHHLTETTMELLIEAAQHRYSSELCRVAESPLPKAVKRAVDYMRANITRPLSLEEIATACGVSRRTLQSGFRNFRNTTPLAFLQHLRLELVHQELMTGEPGLSVTQVALKWGFVHRGRFSADYRKRYGVLPSETLRIS
SIO_010081: AMC88_RS26015
subclass of: SO_0000673
so part of: AMC88_RS26015
location: 168791..169756
location: region:168791-169756:1
so has part: feature:168791-169756:1:exon

WP_008534397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168791-169756:1:exon

AMC88_RS26020
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26020
old locus tag: AMC88_PC00150
so part of: sequence
location: 170049..172310
location: region:170049-172310:1
so has part: feature:170049-172310:1:exon
subclass of: SO_0000010

45960480
type: Gene
SIO_000068: ncbigene

position:170049:1
position: 170049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172310:1
position: 172310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170049-172310:1:exon

AMC88_RS26020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26020
old locus tag: AMC88_PC00150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008534399.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MSRLPLSLLLMILAIIPLTAFVIIGVSTSLGYYREYSTFRSAQTTQRLGREGGFLAQAIAAEAFAGADVRRAKQAASDRAFTAVFSAYDSWKKAFDDPAIERAVQIIRERRDNIDSFRRRVDDGTASEAEGAVALRPAALAGLELVRRTGATVNDLDLARQITGFHALMQITEASLLEIRPGRAYVKNSAMSVDLFSSLLQSKNLKQLYVPAMQEFLPADLVKSYDDFEASAAGKFIAGVRDQMYANQPGVSFPPETLDRWNEITQQRAALLTALIMRTGDELDEMAFQRYADLRNAFIGYSGATLLIMSTVLILCISVVRRISSSIRTLTSRMKALAEGDTSAPVPLTIRRDEIGDMARCLEFFRGAAIQKSNLETSAEAERIRSDQEKLDIQVRAEKEAEERLIRATTALATGLKRMADGDLIYEIEEPLAPQFESLRRDFNASIRQLRDVLVTVGHSVETVTNGSSGVSAASENLSRRTEQQAASLEETAAALEEITVNVASTTKRTAEARGAVQQMRDHAEMSGRVVRDAIGAMNRIENSSKQISQIISVIDAIAFQTNLLALNAGVEAARAGDAGKGFAVVAQEVRELAQRSATAAKEIKDLIGNSALAVDEGVRLVSETGSGLRTIEELVQDVNLHMDAIATASQEQSSGLREINGAVNHMDHATQENASMVAEMNTAGSHLAQESQSLAALLKHFHFKDESGKPQKVTGELGKSFPPGQTMVDRGDYPMRRGNLVLAPSNDDWQAF
SIO_010081: AMC88_RS26020
subclass of: SO_0000673
so part of: AMC88_RS26020
location: 170049..172310
location: region:170049-172310:1
so has part: feature:170049-172310:1:exon

WP_008534399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170049-172310:1:exon

AMC88_RS26025
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26025
old locus tag: AMC88_PC00151
so part of: sequence
location: 172486..175284
location: region:172486-175284:1
so has part: feature:172486-175284:1:exon
subclass of: SO_0000010

45960481
type: Gene
SIO_000068: ncbigene

position:172486:1
position: 172486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175284:1
position: 175284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172486-175284:1:exon

AMC88_RS26025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26025
old locus tag: AMC88_PC00151
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489479.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional diguanylate cyclase/phosphodiesterase
translation: MKHVRQSERTSRPEQPVEVQMPTDAQIDQGRGAFRNAVNASPPLATGTAPPFSEASVVRPSHGHDADVASLKQPFEKAFRANPRNPATNIDLPFNAEEMSSAVVLDAIPLPVFFKNRDGIHLGCNRAFESFSGRSKGDIIGKTVFDLVPAPIAETYAALDEALFANGGVQQYEAKATTENGGVVDLLLSKTAITDIAGNRIGLVGAMLDITERKRAEHDLKEALEFAEGIIAAIPDVLFEVNADGRYLQVWARNQEILAQRKEVLLGKLVRDVLPPDQADIAMLALEEADETGASYGRCVRIALPNGESRWFELSVARRPSSNHSTVTFLVLSRDITERKHAEGTTIEARARLLSVLQTIPDMVWLKDVTGKYLLCNHAFEELVGKAEAEIVGKTDYDLFTPELAQFFRDKDEEAMQAGRILINEERFTAHEDGRSTLLETRKVPVFTGGKLMGILGVARDITELDTSRKKIHQMAFYDSLTGLPNRTLFNERLREMIGDAASAGQRAGVMLIDMDHFKAINDTMGHPVGDELLRQVATRMKKGVRASDTVARLGGDEFAVLLPNVQDNDDLAQIASRMLAAFGERFMLSDREIFVSCSIGISVFPNDGDAPDDLVKYADSAMYLAKRSGRSNFRFYSKDLTIGAEKRLALESDLRLALKHEQLELHYQPKVLLDNGKVIGSEALLRWHHPKMGMIPPGEFIGVAEETGLIIDLGRWVLHEACCTAAVMNADGLPPHKIAINLSPKQFQCPRLSQTVADVLQETGCRAEWIEVEITESLLLHNCEGVSTTLSQLHASGISIAIDDFGTGYSSLSYLANFPIDTLKIDRSFINRSDKRSRELVKAILSIARCLGQNVVAEGVETVDQEKFLAESGCAVAQGFYYSKPIPKSELLAANAVLEFSRGDSHLTPMPAEEGVALMRLPPASVGTRTA
SIO_010081: AMC88_RS26025
subclass of: SO_0000673
so part of: AMC88_RS26025
location: 172486..175284
location: region:172486-175284:1
so has part: feature:172486-175284:1:exon

WP_040111784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172486-175284:1:exon

AMC88_RS34185
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: groEL
locus tag: AMC88_RS34185
pseudo: true
so part of: sequence
location: complement(<176029..>176255)
location: region:176029-176255:-1
so has part: feature:176029-176255:-1:exon
subclass of: SO_0000010

70363071
type: Gene
SIO_000068: ncbigene

position:176029:-1
position: 176029
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:176255:-1
position: 176255
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176029-176255:-1:exon

AMC88_RS34185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: groEL
locus tag: AMC88_RS34185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018493252.1
note: 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: chaperonin GroEL
SIO_010081: AMC88_RS34185
subclass of: SO_0000673
so part of: AMC88_RS34185
location: complement(<176029..>176255)
location: region:176029-176255:-1
so has part: feature:176029-176255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176029-176255:-1:exon

AMC88_RS26035
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26035
old locus tag: AMC88_PC00153
so part of: sequence
location: 176550..177470
location: region:176550-177470:1
so has part: feature:176550-177470:1:exon
subclass of: SO_0000010

45960483
type: Gene
SIO_000068: ncbigene

position:176550:1
position: 176550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177470:1
position: 177470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176550-177470:1:exon

AMC88_RS26035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26035
old locus tag: AMC88_PC00153
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012760297.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MNRQQSNQRSDIYSRITTKIIADLKQGVRPWTKPWTTGGWTAEVSRPLRHNGQPYTGINALLLWSEAIARGFASPRWMTFRQAIELGGAVRRGETGTTVVFASSFIRAETTETGAEIERDIPFLKTYTVFNTDQITGLDGLAHSIAPDQDWMSRIGAAGRFFANTGALIRHGGSAAYYAAARDYIQMPCFDAFRDDASYVAVLSHEMTHWTAAPRRLDRDLSRYAKDRSERAREELIAELGSCFLCADLGIVPELEPRPDHASYLDDWLKVLGSDKRAIFSAAAHAQRAVDYLHDLQPDLNEEEAA
SIO_010081: AMC88_RS26035
subclass of: SO_0000673
so part of: AMC88_RS26035
location: 176550..177470
location: region:176550-177470:1
so has part: feature:176550-177470:1:exon

WP_004673402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176550-177470:1:exon

AMC88_RS26040
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26040
old locus tag: AMC88_PC00154
so part of: sequence
location: complement(178244..178615)
location: region:178244-178615:-1
so has part: feature:178244-178615:-1:exon
subclass of: SO_0000010

45960484
type: Gene
SIO_000068: ncbigene

position:178244:-1
position: 178244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178615:-1
position: 178615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178244-178615:-1:exon

AMC88_RS26040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26040
old locus tag: AMC88_PC00154
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004673403.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSAIKTQWHNLAFSGLILHEILDHPLEDETPQARLKQIGMMTILYTMTQAHQKLTLSNIIEITELTRSGVKETVDLLVKRGMLLETMGKNAMGRGTARQFEISQDLLSKLSSFRASQEAGLN
SIO_010081: AMC88_RS26040
subclass of: SO_0000673
so part of: AMC88_RS26040
location: complement(178244..178615)
location: region:178244-178615:-1
so has part: feature:178244-178615:-1:exon

WP_042120136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178244-178615:-1:exon

AMC88_RS26045
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26045
old locus tag: AMC88_PC00155
so part of: sequence
location: 178714..179250
location: region:178714-179250:1
so has part: feature:178714-179250:1:exon
subclass of: SO_0000010

45960485
type: Gene
SIO_000068: ncbigene

position:178714:1
position: 178714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179250:1
position: 179250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178714-179250:1:exon

AMC88_RS26045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26045
old locus tag: AMC88_PC00155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018446357.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSLLLNSLLTICFVAPPYLIFGSKARAEDWGCQVILCLSNPGGPTQYAECRPPIQKLWRELAEGHSFPTCSGVGFQSSRPGYEPYYCDAGYKLTTDSGRGGRQATCVSTSPQPVSNSLCWDGNDYTSRDNSVLSPHWQRVDGHRQCMGYPISRPNVRSQPHYVDVTIDGAGKQRVWY
SIO_010081: AMC88_RS26045
subclass of: SO_0000673
so part of: AMC88_RS26045
location: 178714..179250
location: region:178714-179250:1
so has part: feature:178714-179250:1:exon

WP_011053366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178714-179250:1:exon

AMC88_RS26050
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26050
old locus tag: AMC88_PC00156
so part of: sequence
location: 179254..179922
location: region:179254-179922:1
so has part: feature:179254-179922:1:exon
subclass of: SO_0000010

45960486
type: Gene
SIO_000068: ncbigene

position:179254:1
position: 179254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179922:1
position: 179922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179254-179922:1:exon

AMC88_RS26050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26050
old locus tag: AMC88_PC00156
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737445.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MGAAFVEIAQTCAPMVQVQTLAGVVSLESRFQPFAIRINSGPPLAAQPASKAEAIEVATSLIADRQDIQIGLGGLGIEHLQKLKLSVADAFDPCRNLKATATLLDGYYRAALRAGDPAQAERVMLQSYYGRDDPSLGAMAKYDEQVRQEAKQLSPTLASLTIGERGDQAGSGGQPQDEVVPARPEPPLQPSQTVEAPSWDVFSSGRQSSVLVFQNDRSEQSE
SIO_010081: AMC88_RS26050
subclass of: SO_0000673
so part of: AMC88_RS26050
location: 179254..179922
location: region:179254-179922:1
so has part: feature:179254-179922:1:exon

WP_064820013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179254-179922:1:exon

AMC88_RS26055
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26055
old locus tag: AMC88_PC00157
so part of: sequence
location: 179919..180218
location: region:179919-180218:1
so has part: feature:179919-180218:1:exon
subclass of: SO_0000010

45960487
type: Gene
SIO_000068: ncbigene

position:179919:1
position: 179919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180218:1
position: 180218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179919-180218:1:exon

AMC88_RS26055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26055
old locus tag: AMC88_PC00157
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016735283.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MISKAPLRPLAASTLMAAAIVICLVEPAFAQAAGIETVLQNIVDMLTGNIARLLAVIAVIIICIAWMFGYMDLRRAGFWIIGIGGIFGATELVNTIVGN
SIO_010081: AMC88_RS26055
subclass of: SO_0000673
so part of: AMC88_RS26055
location: 179919..180218
location: region:179919-180218:1
so has part: feature:179919-180218:1:exon

WP_007636189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179919-180218:1:exon

AMC88_RS26060
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26060
old locus tag: AMC88_PC00158
so part of: sequence
location: 180224..180562
location: region:180224-180562:1
so has part: feature:180224-180562:1:exon
subclass of: SO_0000010

45960488
type: Gene
SIO_000068: ncbigene

position:180224:1
position: 180224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180562:1
position: 180562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180224-180562:1:exon

AMC88_RS26060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26060
old locus tag: AMC88_PC00158
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636187.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB3
translation: MASIPSLEDDTLFLACTRPAMIAGVTMEAMGVNIMLTTILYITAGSIAYALVGIVFHVLFRALVKHDHNMFRILIAWIETRGRSRNTAYWGGATLSPLTLTRRYDERDLSFV
SIO_010081: AMC88_RS26060
subclass of: SO_0000673
so part of: AMC88_RS26060
location: 180224..180562
location: region:180224-180562:1
so has part: feature:180224-180562:1:exon

WP_011053369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180224-180562:1:exon

AMC88_RS26065
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26065
old locus tag: AMC88_PC00159
so part of: sequence
location: 180555..182921
location: region:180555-182921:1
so has part: feature:180555-182921:1:exon
subclass of: SO_0000010

45960489
type: Gene
SIO_000068: ncbigene

position:180555:1
position: 180555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182921:1
position: 182921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180555-182921:1:exon

AMC88_RS26065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26065
old locus tag: AMC88_PC00159
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636185.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4 family type IV secretion system protein
translation: MSNIATLRSRELGPETFIPYVRHVDETTIALESRALMTMIALDGVSFETSDVRDLNGLHRSLNTLYRNIADERLALWTHVVRRRDNAYPDGRFANPFSDGLNARYRERMVNEDLFRNDLYLTLVWHPGRDPAEKAAKLLSRLRKARRSDTELDGQALKHLRDRVADVVAGLKRFEPRLLTLHEQDGILFSEPSEVLHQIVGGRREPIPLTEGRISSAIYSDRVIFGRETVEIRHEADSRYAGMFGFKEYPATTRSGMLDAILTAPFELILTQSFAFTSKADARTIMGRKQNQMVSAGDKAASQIEELGEAMDDLESNRFVLGEHHLALAVFAPSVKELTDHMAKARAYLTSGGAVVAREDLGLEAAWWAQAPGNFRYRARSGAITSRNFAALAPYHSYPAGKKDGNEWGPAVAMLKTASGSPFYFNFHHGDLGNSFVCGPSGAGKTVLLNFMLSQLEKHDPHMVFFDKDRGADLFVRAAGGTYLPLKNGAATGCAPLKALELTAENKVFLTGWIAKLVGSASGELSITELRDIASAIDGVADLPVEHRSIGALRAFLNNTDPEGIASRLRRWERGEQLGWVFDNEADDIGIGAKFIGYDMTDFLDNEEIRTPLMAYLFYRIEQLIDGRRIIIVIDEFWKALQDEGFRDLAQNKLKTIRKQNGLMLFATQSPRDAIVSPIAHTIIEQCPTQIFLPNPRGDRADYVDGFKLTEREFELVSRELSVESRRFIVKQGHNSVVAELNLSGFDDELAILSGRTANVELADAIRSEIGEGPEDWLAVFHQRRKTA
SIO_010081: AMC88_RS26065
subclass of: SO_0000673
so part of: AMC88_RS26065
location: 180555..182921
location: region:180555-182921:1
so has part: feature:180555-182921:1:exon

WP_064830109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180555-182921:1:exon

AMC88_RS26070
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: virB5
locus tag: AMC88_RS26070
old locus tag: AMC88_PC00160
so part of: sequence
location: 182918..183619
location: region:182918-183619:1
so has part: feature:182918-183619:1:exon
subclass of: SO_0000010

45960490
type: Gene
SIO_000068: ncbigene

position:182918:1
position: 182918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183619:1
position: 183619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182918-183619:1:exon

AMC88_RS26070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: virB5
locus tag: AMC88_RS26070
old locus tag: AMC88_PC00160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489487.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer protein VirB5
translation: MIRTGTMRPLFVSAALLASAMLASAQGIPVIDQTSIAKQIESIAQLKSQLDALNQQLQQAQQLYGSLNKITNMADVANLLNDPSIRKALPQDFNAIEGLFKGSGSGVFGSSASKFLQDNSTYRTDADDFYAQELSRIQNQNAGQMSLGRQIYDAATKRIGGIDELRQKISGAADAKDIADLQARLQAETAFLQTDVLRMQGLQMVQQAQVQVDDQRKAEDWRKRMDTMGAALK
SIO_010081: AMC88_RS26070
subclass of: SO_0000673
so part of: AMC88_RS26070
location: 182918..183619
location: region:182918-183619:1
so has part: feature:182918-183619:1:exon

WP_011053371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182918-183619:1:exon

AMC88_RS26075
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26075
old locus tag: AMC88_PC00161
so part of: sequence
location: 183616..183849
location: region:183616-183849:1
so has part: feature:183616-183849:1:exon
subclass of: SO_0000010

45960491
type: Gene
SIO_000068: ncbigene

position:183616:1
position: 183616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183849:1
position: 183849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183616-183849:1:exon

AMC88_RS26075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26075
old locus tag: AMC88_PC00161
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004673415.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EexN family lipoprotein
translation: MKWLLFSAAMLFLAACSPQAEKIYTVDEFMADDALLAKIIGECRNNPGELRDTPNCRNAEAADGKLRLERMGKSLGG
SIO_010081: AMC88_RS26075
subclass of: SO_0000673
so part of: AMC88_RS26075
location: 183616..183849
location: region:183616-183849:1
so has part: feature:183616-183849:1:exon

WP_008537008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183616-183849:1:exon

AMC88_RS26080
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26080
old locus tag: AMC88_PC00162
so part of: sequence
location: 183852..184784
location: region:183852-184784:1
so has part: feature:183852-184784:1:exon
subclass of: SO_0000010

45960492
type: Gene
SIO_000068: ncbigene

position:183852:1
position: 183852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184784:1
position: 184784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183852-184784:1:exon

AMC88_RS26080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26080
old locus tag: AMC88_PC00162
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053372.1
GO process: GO:0030255 - protein secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MYQVFSFVDGQFKAPLEIFISSGTSNIASWVSGPLTAALTLYVVLYGYLVLRGSVQEPILEFAFRAMKLAIIVMLVRNAGEYQTYVTNIFFDALPHEISQALNSGAAPSASTFDSLLDKGQRCAKEIWSRGSWPIDIVTGVGGLLVIGASFLVAAIGYIVSLYARLALAIVLAIGPIFIALAMFQSTRRFTESWIGQLANFVILQVLVVAIGSLLITCIDTTFTAIESYSDVLMRPIALCAICVAALYVFYQLPGIASALAAGGASLTYGYGAARDAHESTLAWATSHTVRAVGRGARSVGRRLTPGRTE
SIO_010081: AMC88_RS26080
subclass of: SO_0000673
so part of: AMC88_RS26080
location: 183852..184784
location: region:183852-184784:1
so has part: feature:183852-184784:1:exon

WP_064820015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183852-184784:1:exon

AMC88_RS34190
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34190
old locus tag: AMC88_PC00163
so part of: sequence
location: 184826..185107
location: region:184826-185107:1
so has part: feature:184826-185107:1:exon
subclass of: SO_0000010

70363072
type: Gene
SIO_000068: ncbigene

position:184826:1
position: 184826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185107:1
position: 185107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184826-185107:1:exon

AMC88_RS34190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34190
old locus tag: AMC88_PC00163
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004673420.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRIVLSFLLTAGLVGCGSISHPLPKCDGYSRRPLNRAMWQWQDSGGEQPATRAVPAEPTSHAAAYVPEPSSATPAAFAHFDVAGSYRPCEGE
SIO_010081: AMC88_RS34190
subclass of: SO_0000673
so part of: AMC88_RS34190
location: 184826..185107
location: region:184826-185107:1
so has part: feature:184826-185107:1:exon

WP_081278376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184826-185107:1:exon

AMC88_RS26085
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26085
old locus tag: AMC88_PC00164
so part of: sequence
location: 185109..185780
location: region:185109-185780:1
so has part: feature:185109-185780:1:exon
subclass of: SO_0000010

45960493
type: Gene
SIO_000068: ncbigene

position:185109:1
position: 185109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185780:1
position: 185780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185109-185780:1:exon

AMC88_RS26085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26085
old locus tag: AMC88_PC00164
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489489.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: virB8 family protein
translation: MVTTNNLKSYFDKARRFDQDRMIQVERSARIAWFVAACAGTLAAVSVFAVAGLTPLKTVEPFVVRVDNSTGIVDVVSALTSAAGTYDEAVTKYFAAKYVRAREGYVWSEGEENFRTVALLSTQPEQTRFAAVYRGSNPDSPQNIYGRSATSRINIVSISLINANVASVRYMRTVTRGDEVRTTHWVTTLTFSYANAPMSSTDRLTNPLGFVVSEYRADPEAIN
SIO_010081: AMC88_RS26085
subclass of: SO_0000673
so part of: AMC88_RS26085
location: 185109..185780
location: region:185109-185780:1
so has part: feature:185109-185780:1:exon

WP_064820016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185109-185780:1:exon

AMC88_RS26090
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: virB9
locus tag: AMC88_RS26090
old locus tag: AMC88_PC00165
so part of: sequence
location: 185777..186634
location: region:185777-186634:1
so has part: feature:185777-186634:1:exon
subclass of: SO_0000010

45960494
type: Gene
SIO_000068: ncbigene

position:185777:1
position: 185777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186634:1
position: 186634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185777-186634:1:exon

AMC88_RS26090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: virB9
locus tag: AMC88_RS26090
old locus tag: AMC88_PC00165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009996879.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein VirB9
translation: MRLHFLLPLILTTGFSSAALALETPRGAAQDNRIRFVDYQPYNITKVVGTLRSSVQIEFAADEEIAHVALGNSVAWEVAPAGNILFLKPRENQPVTNISVVTTRRDGSTRSYQMELTVRDGSVEAGQNTFFYVKYRYPADEAERHRQEAAARAQAAQAGEADRVLALHEAYGPRNWRYSAQGSQALEPQAVYDNGKVTTFAFAGNQEMPAIYMENSDGSESLVSKSVDGNLVLVHAISRKFILRRGGDVLCVFNEAYDRVGINSETNTTSPSVERVVKVPPGAAQ
SIO_010081: AMC88_RS26090
subclass of: SO_0000673
so part of: AMC88_RS26090
location: 185777..186634
location: region:185777-186634:1
so has part: feature:185777-186634:1:exon

WP_064820017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185777-186634:1:exon

AMC88_RS26095
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: virB10
locus tag: AMC88_RS26095
old locus tag: AMC88_PC00166
so part of: sequence
location: 186643..187815
location: region:186643-187815:1
so has part: feature:186643-187815:1:exon
subclass of: SO_0000010

45960495
type: Gene
SIO_000068: ncbigene

position:186643:1
position: 186643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187815:1
position: 187815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186643-187815:1:exon

AMC88_RS26095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: virB10
locus tag: AMC88_RS26095
old locus tag: AMC88_PC00166
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737452.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB10
translation: MAEEEIAQIPGERAETAAGGRLDNNPTLKRGTVALAIVVFVAFALWSMRGQDKPSDGAQPERVVIRQTSDFEPAKEPQPVATPPQFQLPTPVAAEQAPTEDDKLLDAARRAPVIAYGGEKSPATRRQDQGEASDQASNYVPLGANPGGFASQGENEDQRFNRLLTPTQLQGSRAGTLGNRDFIVAMGTSIPCVLETALSSDQPGFTSCVINRDVLSDNGRVVLMEKGTQIVGEYRGGLRRGQKRLFVLWNRAKTPKGVIITLASPATDALGRAGIDGYVDTHWWERFGSAMLLSIVGDASSYASSRLQDSDVEAQNTTSAGQQAAAIAVEQSINIPPTLMKHQGELVSIFVARDLDFSSVYRLRVTEPRNRVYDRAVLGDFSPSSKLVTK
SIO_010081: AMC88_RS26095
subclass of: SO_0000673
so part of: AMC88_RS26095
location: 186643..187815
location: region:186643-187815:1
so has part: feature:186643-187815:1:exon

WP_064820018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186643-187815:1:exon

AMC88_RS26100
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: virB11
locus tag: AMC88_RS26100
old locus tag: AMC88_PC00167
so part of: sequence
location: 187824..188852
location: region:187824-188852:1
so has part: feature:187824-188852:1:exon
subclass of: SO_0000010

45960496
type: Gene
SIO_000068: ncbigene

position:187824:1
position: 187824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188852:1
position: 188852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187824-188852:1:exon

AMC88_RS26100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: virB11
locus tag: AMC88_RS26100
old locus tag: AMC88_PC00167
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636165.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MTEAADSGVVRELLSPLSRFLRDKTLYEVVVNLPGQVVTEGRDGWQTYEMPELSFDRLMRLARAVASFSDQSIDETRPILSATLPDDERIQIVIPPATTKGTVSITIRKPSSVSLTLEDLDHGGLFADVLRVDGDASRSDQRLLEYYRIGAYKAFLREAVFARKNIIISGATGSGKTTLSKALIRHIPHSERIISIEDTPELVVPQPNHVRLLYSKGGQGLAKVGAKDLLESCLRMRPDRILLQELRDGTAFYYIRNVNSGHPGSITTVHADSARLAFEQLTLLVKESEGGGDLERHDIREMLTIAVDIIIQCKRIDGRFRVSEIYYRDAATDLGRSSSDRA
SIO_010081: AMC88_RS26100
subclass of: SO_0000673
so part of: AMC88_RS26100
location: 187824..188852
location: region:187824-188852:1
so has part: feature:187824-188852:1:exon

WP_064820019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187824-188852:1:exon

AMC88_RS26105
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26105
old locus tag: AMC88_PC00168
so part of: sequence
location: complement(188896..189474)
location: region:188896-189474:-1
so has part: feature:188896-189474:-1:exon
subclass of: SO_0000010

45960497
type: Gene
SIO_000068: ncbigene

position:188896:-1
position: 188896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189474:-1
position: 189474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188896-189474:-1:exon

AMC88_RS26105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26105
old locus tag: AMC88_PC00168
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737454.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MASKPPVAVYDACVLYPFHLRNALVQCAFDGLVDARWTDDIHAEWIRNLAIGSPDIPFARLKATRDRIKEVLPDADVGNHRILIPDLSLPDPDDRHVLAAAIAGKASLIVTWNLKDFPAADLRPHGVACVSPDNFLVGLHSTFSSALIDSIRRGRLNLRKTVPAVHEFIDALDHQGLRAFSVVLREKAAQLD
SIO_010081: AMC88_RS26105
subclass of: SO_0000673
so part of: AMC88_RS26105
location: complement(188896..189474)
location: region:188896-189474:-1
so has part: feature:188896-189474:-1:exon

WP_064820020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188896-189474:-1:exon

AMC88_RS26110
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26110
old locus tag: AMC88_PC00169
so part of: sequence
location: complement(189464..189910)
location: region:189464-189910:-1
so has part: feature:189464-189910:-1:exon
subclass of: SO_0000010

45960498
type: Gene
SIO_000068: ncbigene

position:189464:-1
position: 189464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189910:-1
position: 189910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189464-189910:-1:exon

AMC88_RS26110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26110
old locus tag: AMC88_PC00169
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636161.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MTSHVLQFTKLSDRDRKAVAPMPNLAEGDQLELRIRREGGQLQTLSLPASALAPVEALLDHLLRGKRVAVLTEDQELSPTDASTILGISRPLVVLRMDRGDLPFRYVGKHRRAKLKDVLALKDKLDARQKSLDALAEDTEDLIVNHGL
SIO_010081: AMC88_RS26110
subclass of: SO_0000673
so part of: AMC88_RS26110
location: complement(189464..189910)
location: region:189464-189910:-1
so has part: feature:189464-189910:-1:exon

WP_225882822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189464-189910:-1:exon

AMC88_RS26115
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26115
old locus tag: AMC88_PC00171
so part of: sequence
location: complement(190424..191614)
location: region:190424-191614:-1
so has part: feature:190424-191614:-1:exon
subclass of: SO_0000010

45960499
type: Gene
SIO_000068: ncbigene

position:190424:-1
position: 190424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191614:-1
position: 191614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190424-191614:-1:exon

AMC88_RS26115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26115
old locus tag: AMC88_PC00171
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737456.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1173 domain-containing protein
translation: MRQFLIGNQAFDDSSPEFLPQLERAYEQKLRPLCPCRQPPVPMYIARMDGQFLIKRMPLSGRQHDPGCSSYDPPYELSGLGPLIGNAIQIDAATGAATLKLNFSLSKRGGRSTSTSPSEPSETVRSEPKKLSLRAMLHYLWDMGELTEWTSLWAGKRGWGRVRSSLVNAAKQMIVRGGPLSDILFVPEVFHQDDKEGISARRAAMLAGAQLTGPGPRKLMMTVGEVKEFSSARDGQKMLVRHLPFPFMLDEGAWKRLNARYETELELWRSNEGFHLIVIATFGISGAGIASVEEVALMVVNENWIPFETIHEQRLLERLSSLKRRSVKGLRFDLSRDQPIASVTLPEARPAPIAMFIVPTKADEDYDVALNEMIAARAEMTPWIWRVADGEMPRLP
SIO_010081: AMC88_RS26115
subclass of: SO_0000673
so part of: AMC88_RS26115
location: complement(190424..191614)
location: region:190424-191614:-1
so has part: feature:190424-191614:-1:exon

WP_064820021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190424-191614:-1:exon

AMC88_RS34195
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34195
pseudo: true
so part of: sequence
location: <191924..192181
location: region:191924-192181:1
so has part: feature:191924-192181:1:exon
subclass of: SO_0000010

70363073
type: Gene
SIO_000068: ncbigene

position:191924:1
position: 191924
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:192181:1
position: 192181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191924-192181:1:exon

AMC88_RS34195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003571619.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: toprim domain-containing protein
SIO_010081: AMC88_RS34195
subclass of: SO_0000673
so part of: AMC88_RS34195
location: <191924..192181
location: region:191924-192181:1
so has part: feature:191924-192181:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:191924-192181:1:exon

AMC88_RS26125
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26125
pseudo: true
so part of: sequence
location: 192506..193446
location: region:192506-193446:1
so has part: feature:192506-193446:1:exon
subclass of: SO_0000010

45960500
type: Gene
SIO_000068: ncbigene

position:192506:1
position: 192506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193446:1
position: 193446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192506-193446:1:exon

AMC88_RS26125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010967479.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF2493 domain-containing protein
SIO_010081: AMC88_RS26125
subclass of: SO_0000673
so part of: AMC88_RS26125
location: 192506..193446
location: region:192506-193446:1
so has part: feature:192506-193446:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192506-193446:1:exon

AMC88_RS26130
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26130
old locus tag: AMC88_PC00174
so part of: sequence
location: 193531..193797
location: region:193531-193797:1
so has part: feature:193531-193797:1:exon
subclass of: SO_0000010

45960501
type: Gene
SIO_000068: ncbigene

position:193531:1
position: 193531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193797:1
position: 193797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193531-193797:1:exon

AMC88_RS26130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26130
old locus tag: AMC88_PC00174
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013845385.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQSRQQIPSPRRVGVREFRGNLTSFLKQVEDGQRFVLTSHHKVVAEIGPPSAGVVMRKPGALRGKIKVADDFDGLPADVLKSMEDGT
SIO_010081: AMC88_RS26130
subclass of: SO_0000673
so part of: AMC88_RS26130
location: 193531..193797
location: region:193531-193797:1
so has part: feature:193531-193797:1:exon

WP_004676093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193531-193797:1:exon

AMC88_RS26135
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26135
old locus tag: AMC88_PC00175
so part of: sequence
location: 193794..194192
location: region:193794-194192:1
so has part: feature:193794-194192:1:exon
subclass of: SO_0000010

45960502
type: Gene
SIO_000068: ncbigene

position:193794:1
position: 193794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194192:1
position: 194192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193794-194192:1:exon

AMC88_RS26135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26135
old locus tag: AMC88_PC00175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007823649.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MRLLLDTHALLWWLNDDEKLGNHARRLIGDPENDVLVSAVSLWEITVKLRIGKLDADIEEIVAILPDQGFDRLDISDAHLIALAALPLHHRDPFDHLLMAQAVAEGAYLVSDDQNVALYGIPFVTCSDPVAL
SIO_010081: AMC88_RS26135
subclass of: SO_0000673
so part of: AMC88_RS26135
location: 193794..194192
location: region:193794-194192:1
so has part: feature:193794-194192:1:exon

WP_008536014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193794-194192:1:exon

AMC88_RS26140
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26140
old locus tag: AMC88_PC00176
so part of: sequence
location: 194799..195122
location: region:194799-195122:1
so has part: feature:194799-195122:1:exon
subclass of: SO_0000010

45960503
type: Gene
SIO_000068: ncbigene

position:194799:1
position: 194799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195122:1
position: 195122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194799-195122:1:exon

AMC88_RS26140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26140
old locus tag: AMC88_PC00176
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003535142.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF736 family protein
translation: MATTIATLTQKTDGILEGVFATIRVNAPIAIVPNASKASEEAPDYRVIHRKTGFEIGAAWNRIARQTGEEYLSVKLEAPEIGVIFGNLAPAPGGDPSKKVILWNSPN
SIO_010081: AMC88_RS26140
subclass of: SO_0000673
so part of: AMC88_RS26140
location: 194799..195122
location: region:194799-195122:1
so has part: feature:194799-195122:1:exon

WP_004676095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194799-195122:1:exon

AMC88_RS33785
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33785
old locus tag: AMC88_PC00177
so part of: sequence
location: 195468..195635
location: region:195468-195635:1
so has part: feature:195468-195635:1:exon
subclass of: SO_0000010

45961813
type: Gene
SIO_000068: ncbigene

position:195468:1
position: 195468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195635:1
position: 195635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195468-195635:1:exon

AMC88_RS33785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33785
old locus tag: AMC88_PC00177
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004676096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIALEIQVEELRAELRNADPAERRQIEAELEIARAELRVAIAEQEGAIDAAPPF
SIO_010081: AMC88_RS33785
subclass of: SO_0000673
so part of: AMC88_RS33785
location: 195468..195635
location: region:195468-195635:1
so has part: feature:195468-195635:1:exon

WP_004676096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195468-195635:1:exon

AMC88_RS26145
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26145
old locus tag: AMC88_PC00178
so part of: sequence
location: complement(195716..195967)
location: region:195716-195967:-1
so has part: feature:195716-195967:-1:exon
subclass of: SO_0000010

45960504
type: Gene
SIO_000068: ncbigene

position:195716:-1
position: 195716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195967:-1
position: 195967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195716-195967:-1:exon

AMC88_RS26145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26145
old locus tag: AMC88_PC00178
inference: COORDINATES: protein motif:HMM:NF017243.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WGR domain-containing protein
translation: MARFYALAIEPTLFGTPCLTRRWGRIGTIGQAMVHHFDREEDAVRMFLELLRSKRARGYRPNTNVGREPMVRAVRGSLPGPCR
SIO_010081: AMC88_RS26145
subclass of: SO_0000673
so part of: AMC88_RS26145
location: complement(195716..195967)
location: region:195716-195967:-1
so has part: feature:195716-195967:-1:exon

WP_237353191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195716-195967:-1:exon

AMC88_RS26150
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26150
old locus tag: AMC88_PC00179
so part of: sequence
location: 196524..197006
location: region:196524-197006:1
so has part: feature:196524-197006:1:exon
subclass of: SO_0000010

45960505
type: Gene
SIO_000068: ncbigene

position:196524:1
position: 196524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197006:1
position: 197006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196524-197006:1:exon

AMC88_RS26150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26150
old locus tag: AMC88_PC00179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010066437.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTDQNLILYTKFAGFRLVVLANRFGCDSDFSRELHDRLVEGLDAAIDRISVIMELERSVLIGEDEFAEYQLEGEIEIFGRFTINLLDELEIDYDTHEFRVNGGDWMSAWAADDTGVDINYPELVALIADELGSLAPIIKDITLATRIPVYAGRVVWSWW
SIO_010081: AMC88_RS26150
subclass of: SO_0000673
so part of: AMC88_RS26150
location: 196524..197006
location: region:196524-197006:1
so has part: feature:196524-197006:1:exon

WP_004676098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196524-197006:1:exon

AMC88_RS26155
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26155
old locus tag: AMC88_PC00180
so part of: sequence
location: 197161..197430
location: region:197161-197430:1
so has part: feature:197161-197430:1:exon
subclass of: SO_0000010

45960506
type: Gene
SIO_000068: ncbigene

position:197161:1
position: 197161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197430:1
position: 197430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197161-197430:1:exon

AMC88_RS26155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26155
old locus tag: AMC88_PC00180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053387.1
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
translation: MPKPSGTYSTSDLSRKSGDIIAEALRHPVTITQRNKPRLVLLNIEDYQQLIRQADRRTVGTIETMPDELFAELENAVDAYAGEDEVGRS
SIO_010081: AMC88_RS26155
subclass of: SO_0000673
so part of: AMC88_RS26155
location: 197161..197430
location: region:197161-197430:1
so has part: feature:197161-197430:1:exon

WP_008536018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197161-197430:1:exon

AMC88_RS26160
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: traG
locus tag: AMC88_RS26160
old locus tag: AMC88_PC00181
so part of: sequence
location: complement(197439..199358)
location: region:197439-199358:-1
so has part: feature:197439-199358:-1:exon
subclass of: SO_0000010

45960507
type: Gene
SIO_000068: ncbigene

position:197439:-1
position: 197439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199358:-1
position: 199358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197439-199358:-1:exon

AMC88_RS26160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: traG
locus tag: AMC88_RS26160
old locus tag: AMC88_PC00181
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489500.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer system protein TraG
translation: MGLRGKPHPSLLLVLAPIAVTTITIYIVGWRWPGLAVGMSGRMEYWFLRAAPVLPLMFGPLAGLLTVWALPLHRRRPVAMASLLCFLGIAAYYALREFGRLAPTVQARVVPWDRALSYLDMVAVIAAVAGFMAVAVSARISVVVPDEIKRARRGIFGDADWLPMAAAGKLFPPDGEIVVGERYRVDKEIIHALPFDVNDRSTWGQGGKAPLLTYRQDFDSTHMLFFAGSGGYKTTSNVVPTALIYTGPMICLDPSTEVAPMVVEHRTNALGREVMVLDPTNPIMGFNVLDGIEASKQKEEDIVGIAHMLLSESLRFESSTGSYFQNQAHNLLTGLLAHVMLSPEYEGRRSLRSLRQIVSEPEPSVLAMLRDIQEHSGSAFIRETLGVFTNMTEQTFSGVYSTASKDTQWLSLDSYAALVCGNAFKSSDIVSGKKDVFLNISASILRSYPGIARVIIGSLINAMVQADGAFQRRALFMLDEVDLLGYMRVLEEARDRGRKYGISMMLMYQSVGQLERHFGKDGATSWIDGCAFASYAAIKALDTARNLSAQCGEMTVEVKGSSRNIGWDTKNNASRRSENVNFQRRPLIMPHEITQSMRKDEQIIIVQGHSPIRCGRAIYFRRKEMDQAAKVNRFVKPVL
SIO_010081: AMC88_RS26160
subclass of: SO_0000673
so part of: AMC88_RS26160
location: complement(197439..199358)
location: region:197439-199358:-1
so has part: feature:197439-199358:-1:exon

WP_046977192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197439-199358:-1:exon

AMC88_RS26165
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26165
old locus tag: AMC88_PC00182
so part of: sequence
location: complement(199349..199588)
location: region:199349-199588:-1
so has part: feature:199349-199588:-1:exon
subclass of: SO_0000010

45960508
type: Gene
SIO_000068: ncbigene

position:199349:-1
position: 199349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199588:-1
position: 199588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199349-199588:-1:exon

AMC88_RS26165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26165
old locus tag: AMC88_PC00182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004676101.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
translation: MTAERKRDAREKFLLGGIVVRAGLSKADRAFLLGGLIELAKLAPGSIEHRRLRDIGEEAFKAPSLADVSSHLKETAEWA
SIO_010081: AMC88_RS26165
subclass of: SO_0000673
so part of: AMC88_RS26165
location: complement(199349..199588)
location: region:199349-199588:-1
so has part: feature:199349-199588:-1:exon

WP_011053389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199349-199588:-1:exon

AMC88_RS26170
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26170
old locus tag: AMC88_PC00183
so part of: sequence
location: complement(199578..199865)
location: region:199578-199865:-1
so has part: feature:199578-199865:-1:exon
subclass of: SO_0000010

45960509
type: Gene
SIO_000068: ncbigene

position:199578:-1
position: 199578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199865:-1
position: 199865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199578-199865:-1:exon

AMC88_RS26170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26170
old locus tag: AMC88_PC00183
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636139.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraC family protein
translation: MATKSSISDLDAQIEKLRERKRLLIVKSAERFARAATRTGLAEMEIADEEVDRIIEEIAARFRKGERKIAAGPAPQARRSGDSGAGAQGQAPNDG
SIO_010081: AMC88_RS26170
subclass of: SO_0000673
so part of: AMC88_RS26170
location: complement(199578..199865)
location: region:199578-199865:-1
so has part: feature:199578-199865:-1:exon

WP_016737548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199578-199865:-1:exon

AMC88_RS26175
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: traA
locus tag: AMC88_RS26175
old locus tag: AMC88_PC00184
so part of: sequence
location: 200039..204721
location: region:200039-204721:1
so has part: feature:200039-204721:1:exon
subclass of: SO_0000010

45960510
type: Gene
SIO_000068: ncbigene

position:200039:1
position: 200039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204721:1
position: 204721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200039-204721:1:exon

AMC88_RS26175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: traA
locus tag: AMC88_RS26175
old locus tag: AMC88_PC00184
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053391.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
translation: MAIMFVRAQVISRGSGRSIVSAAAYRHRARMMDEQAGTSFSYRGGAGELMYEELALPDEIPDWLRSAISGQSVSKASEVFWNAVDAFETRADAQLARELIIALPEELTRAENITLVREFVRDNLTSKGMIADWVYHDKDGNPHIHLMTTLRPLTEEGFGAKKVPVLGEDGKPLRVVTPDRPNGKIVYKVWAGDKETMKAWKIAWAETANRHLALAGHDIRLDGRSYAEQGLDGIAQKHLGPEKAALARKGRELHFAPADLARRQEMADRLLSEPELLLKQLGNERSTFDEREIAKALHRYVDDPVDFANIRVRLMASDQLVILKPQEIEAETGKVSEPAMFTTREMLRIEYDMAQSARVLSERRGFGVSERNVKVAIESVESGDPKTPFRLDAEQVDAVRHVTGDSGIAAVVGLAGAGKSTLLAAARLAWEGEGHRVIGAALAGKAAEGLQDSSGIKSRTLASWELAWANGRDTLHRGDVLVIDEAGMVASQQMARVLKIAEEAEVKVVLVGDAMQLQPIQAGAAFRAITERIGFAELAGVRRQREAWARNASRLFARGEVEKGLDAYAQQGHLVEAGTREETIDRIVVDWTEARKHAIGRSISEGRDGRLRGDELLVLAHTNDDVRKLNEALREVMAGDNALGESRSFRTERGARKFAAGDRIIFLENARFLEPRAKHSGPQYVKNGMLGTVVSTGDKRGGPLLSVLLDNGNKVVFGEDSYRNVDHGYAATIHKSQGATVDRTFVLATGMMDQHLTYVSMTRHRDRVDLYAAIEDFEAKPEWGRKAGVDHAAGVTGELVETGEAKFRPDDEDADDSPYADIRTDGGAVHRLWGVSLPKALEEASIMEGDTVTLRKDGVERVKVQIAVVDEKTGHKHYEEREVDRNVWTASQVETASARQERIERESHRPELFNLLVERLSRSGAKTTTLDFESEASYRAHANDFARRRGLDHLSLAAAEMEESLTRRWAWIAAKREQVEKLWERASVALGFAIERERRVAYNEERSQTMVEATSSDARTASHSVSGASADETRYLIPPATSFVSSVEEDARLAQLASPAWTEREVILRPLLEKIYRDPDAALVSLNALASDIGVAARRLADDLAAAPGRLGRLRGSELIVDGRAAREERNLAVAAVKELLPMARAHATEFRRNAERFDLREQTRRAHMSLSIPALSERAMARLMEIEAVRRQGGDDAYKSAFALAAEDRSVVQEIKAVSEALTARFGWSAFSAKADAIAERNIVERMPEDLTDERRGKLTRLFEAVRRFAEEQHLAERRDRSKVVAGASVDLETEKGVGKENVPIPPMLAAVTEFKVPVDDEARSRALSAPLYRQQRVALANAATTIWRDPAEVVGKIEELLQKGFAADRIGAAVANDPAAYAALRGSDRLVDRMLASGRERKEAVAAVPEAAARLRALGAAYANALNSERQAITEERRRMGVAIPALSKAAEEALARLTAEARKDSRGLRVSAVPLDPGIGREFAAVSRALDERFGRNAIVRGEKDLVSRLPPAQRRAFEAMQERLKVLQQTVRLQSSEQITAERRQRAASRARGINL
SIO_010081: AMC88_RS26175
subclass of: SO_0000673
so part of: AMC88_RS26175
location: 200039..204721
location: region:200039-204721:1
so has part: feature:200039-204721:1:exon

WP_046977193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200039-204721:1:exon

AMC88_RS26180
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26180
old locus tag: AMC88_PC00185
so part of: sequence
location: complement(204761..205231)
location: region:204761-205231:-1
so has part: feature:204761-205231:-1:exon
subclass of: SO_0000010

45960511
type: Gene
SIO_000068: ncbigene

position:204761:-1
position: 204761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205231:-1
position: 205231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204761-205231:-1:exon

AMC88_RS26180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26180
old locus tag: AMC88_PC00185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737463.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKSIGEVRHFVDLGPPGNAHLILPRAPSIAGEEDVSKCVHVAEACVALSRTQHVADKICTQIEDFYQSHVSVGPDRFLAFEGGGAIIRPTSESLFFRVSARDLVTFCGIRALLEAGLFLATSVSEGAIEWLHADGTRSGETCNRLYNDRCGTDEQ
SIO_010081: AMC88_RS26180
subclass of: SO_0000673
so part of: AMC88_RS26180
location: complement(204761..205231)
location: region:204761-205231:-1
so has part: feature:204761-205231:-1:exon

WP_016737463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204761-205231:-1:exon

AMC88_RS26185
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26185
old locus tag: AMC88_PC00186
so part of: sequence
location: complement(205393..206406)
location: region:205393-206406:-1
so has part: feature:205393-206406:-1:exon
subclass of: SO_0000010

45960512
type: Gene
SIO_000068: ncbigene

position:205393:-1
position: 205393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206406:-1
position: 206406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205393-206406:-1:exon

AMC88_RS26185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26185
old locus tag: AMC88_PC00186
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737465.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MREFADFIEECDRAPRLNELTEFFSTTASGEAGMPIRPPELDRRLFPLDMTFRRFSALHPLRQGPFDKHYLSSIPYRLEEECRIGSAILKYARARKGQLQLYTLGTAEGTMARVIGELGNGRIETLSCSPNVENLRSFYAYGVPPHAMFFHGPFHHLTSQRIQEDVELRKFGSGFDIILEDTTFQMYSPNRFDQIRFVSQHLKTDGLFMFVEKFRHEDDEEYRRRERQKDHSFKARFFSASDIRAKEETVLTRMDRNEVTLTKMSETLRRFFEHSFVTWNSGNFYTLVSSNSRENLDLFLSKLSAPAIPAEYVYADLPCRLYPESEARRLSGRSWTL
SIO_010081: AMC88_RS26185
subclass of: SO_0000673
so part of: AMC88_RS26185
location: complement(205393..206406)
location: region:205393-206406:-1
so has part: feature:205393-206406:-1:exon

WP_016737465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205393-206406:-1:exon

AMC88_RS26190
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26190
old locus tag: AMC88_PC00187
so part of: sequence
location: 206663..207547
location: region:206663-207547:1
so has part: feature:206663-207547:1:exon
subclass of: SO_0000010

45960513
type: Gene
SIO_000068: ncbigene

position:206663:1
position: 206663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207547:1
position: 207547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206663-207547:1:exon

AMC88_RS26190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26190
old locus tag: AMC88_PC00187
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636126.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MGIIPSIHPDRMKKSQGEIILHQQGLWSHARADVVRRRSLGRQVIDVVADDHLIFLNIRGTAASGENFVDGRRVEFSPRPDGSLVYIPPGCHWSGWDEGDAEGCYLMITVTQDFFSNLTTKLPRVGTLRPELGFRDLPIQCLARQIAGELSHDDSVGSLIVEGHLAAIFGLLQRRSGTSGRLSRGGLSPTVLKRVIGRIEAHIDRPPSVRALAEEAGLTYEHFSRAFKQSQGSTPYGFYNQRRLERVTDLLRTTAISVTEIAIACGYSSGSHLSTRFRRETGFSPAEYRALWKE
SIO_010081: AMC88_RS26190
subclass of: SO_0000673
so part of: AMC88_RS26190
location: 206663..207547
location: region:206663-207547:1
so has part: feature:206663-207547:1:exon

WP_064820022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206663-207547:1:exon

AMC88_RS26195
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26195
old locus tag: AMC88_PC00188
so part of: sequence
location: 207618..208874
location: region:207618-208874:1
so has part: feature:207618-208874:1:exon
subclass of: SO_0000010

45960514
type: Gene
SIO_000068: ncbigene

position:207618:1
position: 207618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208874:1
position: 208874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207618-208874:1:exon

AMC88_RS26195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26195
old locus tag: AMC88_PC00188
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737466.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MNLPVGSVDEVGATESSGIGYYASRGIYLFCVLASATGRNVYFVLAAWVATDVSKSTSALAILLALGSAAELLTSNVGGVLVDRFDRRFVCIACDLSRLILIFSTGIGLSFGDPLGVLCLSWTIFAFIDRTYSTALQAIIPDIVRPKNLTSFNSASYIAMQAGNLIAAIVTGYSLNAIGMNLTSVLPGAFFALSLLGLLALLGRQPPSRSRSNLQAKSIRRMDLLPTTFVVHPLKTIAVMYALTYAMGMLVSVLGAAYVTRELKGSALEFGYLEAGWALGSIAGCSTLLLRRARSRRQSILFQSALAGIVLLGFPVFQSFFSGLVQLVLLGFCYNVTRILIDVRVQSTVSIDMLGRARSQIHTICVSIGLLAYGIIGTIGDAIPPSGIFGLFGALMMTVALFFYFDMDRGAPAESRFV
SIO_010081: AMC88_RS26195
subclass of: SO_0000673
so part of: AMC88_RS26195
location: 207618..208874
location: region:207618-208874:1
so has part: feature:207618-208874:1:exon

WP_016737466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207618-208874:1:exon

AMC88_RS26200
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26200
old locus tag: AMC88_PC00189
so part of: sequence
location: 208919..210283
location: region:208919-210283:1
so has part: feature:208919-210283:1:exon
subclass of: SO_0000010

45960515
type: Gene
SIO_000068: ncbigene

position:208919:1
position: 208919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210283:1
position: 210283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208919-210283:1:exon

AMC88_RS26200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26200
old locus tag: AMC88_PC00189
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489507.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTLIFELFPWLRQFEQASLNDYAKAAFSVGSDQSGCVARSQAMSLLRSRVAAVAQRQGYSAGAVTRFQTEIEVAPVLQCGPHLHLLIEPDAFYTHLFSLMGLRAHGRTSYISYACSTVKFVERGRKGPAWLHVDGDAVNVFGLSRSKMIPYSILGRNGCYRFHLQNVDRPGHDSEAISCLRDLLPLGEFQSAAEAIKAANLCLWKRYSDSQVDFLQLDDSDVADLVADHLSDGRSWLRASLIEDRAFAMRLIHCIDQLADTAWRGWLKNSTHFFWGCIEGRLFPLWLDGRVLRSKETDDVCVEFSPPSLVEALRTGRIVPNLLLMFIVTSILPGVRVLGGSRHTIYYPLMRWAFCEALRNNHRDTQLLNALSKDERPGVWGHRIISSPCEPFSLLNAVSRGGIATLLEQFGKMSIIDACGPFSSFTQDPLWAELAVAYSSRRVGRHSSQWAFR
SIO_010081: AMC88_RS26200
subclass of: SO_0000673
so part of: AMC88_RS26200
location: 208919..210283
location: region:208919-210283:1
so has part: feature:208919-210283:1:exon

WP_237353192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208919-210283:1:exon

AMC88_RS26205
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26205
old locus tag: AMC88_PC00190
so part of: sequence
location: 210663..211148
location: region:210663-211148:1
so has part: feature:210663-211148:1:exon
subclass of: SO_0000010

45960516
type: Gene
SIO_000068: ncbigene

position:210663:1
position: 210663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211148:1
position: 211148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210663-211148:1:exon

AMC88_RS26205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26205
old locus tag: AMC88_PC00190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018247165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MKRYVAAQVRTSRPAQAKQSDVARESVHPVDRHVGQQIRIRRMQSNVSLGDLGAGIGVSLQQVQKYESGKNRVSASMLYELANCLKIPVSRFFEGLPDPETTQGQQFITEIDGKIAYISTAEGRRLIDDVLLLSPRVRSRVVALVSSIVDEEMEEHKDVSP
SIO_010081: AMC88_RS26205
subclass of: SO_0000673
so part of: AMC88_RS26205
location: 210663..211148
location: region:210663-211148:1
so has part: feature:210663-211148:1:exon

WP_018247165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210663-211148:1:exon

AMC88_RS26210
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26210
old locus tag: AMC88_PC00191
so part of: sequence
location: complement(211220..212455)
location: region:211220-212455:-1
so has part: feature:211220-212455:-1:exon
subclass of: SO_0000010

45960517
type: Gene
SIO_000068: ncbigene

position:211220:-1
position: 211220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212455:-1
position: 212455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211220-212455:-1:exon

AMC88_RS26210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26210
old locus tag: AMC88_PC00191
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636118.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CapA family protein
translation: MSAPFSIAVTGQSLIRHDLRTIGDPRLAEIAEILKASDVAFTNLETTIYGRHGGWPLKGSYFGAAAPDVLAALKELGFNSLALANNHAFDLGPPGILSTLEEVAAHNFLHAGIGHNKHHASTAQKMTFGSRNVALIAMDAGPGPSFMYAEDATEGRIARPGINSLKVSRVFDLEAGTFNLLRSIQERLLSSPLERANYAQPEDPPDLHGQDEIDFYGTVFRRSDETARRIVMDRHSARAHLSAIAEEAGRDTLVIVYLHHHHWEPNWQQVPVWVREFAHDCVNAGAGLFVSHGAPVLQGVEIYRNTPIFYGLGNFLFHTEKDEQEWSPPEVWRSVIATCNFGSSGQLENVRLRPIVIGGTEALSNPARDRLPFPVLADGRMAADILDDLADRSAGFGTVLDREKNVGQIAF
SIO_010081: AMC88_RS26210
subclass of: SO_0000673
so part of: AMC88_RS26210
location: complement(211220..212455)
location: region:211220-212455:-1
so has part: feature:211220-212455:-1:exon

WP_004668595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211220-212455:-1:exon

AMC88_RS26215
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26215
old locus tag: AMC88_PC00192
so part of: sequence
location: complement(212537..213379)
location: region:212537-213379:-1
so has part: feature:212537-213379:-1:exon
subclass of: SO_0000010

45960518
type: Gene
SIO_000068: ncbigene

position:212537:-1
position: 212537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213379:-1
position: 213379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212537-213379:-1:exon

AMC88_RS26215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26215
old locus tag: AMC88_PC00192
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636116.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transporter substrate-binding domain-containing protein
translation: MKRTLLLALSLVVCANNAGAMDRKTLTIASEGASPPWNAITPQGELAGFDIDVGRDLCRRMKFECTFVPQDWDGIIPALTVGKFDAIMSGMAITEKRKKSIAFSKPYAGGFNQVVIRKDLNLPPTDTLAELDLTTIDPEKQAKIEELRAALNGRTLGVLRSSNSEAVLNELFGKVATIRSYDSQDNMHLDLVAERIDGGLADYFTWKAFLDSTDGGIATLYGPRLSGGLWGPGVGVGLRQDDGELVAAFDSAIEAATSDGTLKRLSEQWFKIDVSPQTSN
SIO_010081: AMC88_RS26215
subclass of: SO_0000673
so part of: AMC88_RS26215
location: complement(212537..213379)
location: region:212537-213379:-1
so has part: feature:212537-213379:-1:exon

WP_011053397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212537-213379:-1:exon

AMC88_RS26220
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26220
old locus tag: AMC88_PC00193
so part of: sequence
location: complement(213437..214186)
location: region:213437-214186:-1
so has part: feature:213437-214186:-1:exon
subclass of: SO_0000010

45960519
type: Gene
SIO_000068: ncbigene

position:213437:-1
position: 213437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214186:-1
position: 214186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213437-214186:-1:exon

AMC88_RS26220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26220
old locus tag: AMC88_PC00193
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008536029.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSMTIALEAFLTLPRGLLLTLVLTFASLAAGFAVSVPLAFLRASSNPWASAPVLAYTYAFRGTPLLVQLFLIYYGIGQLPLVRQSFLWAVMREPFWCAFIAFTLNSAAHTTEVLRGGIQAVPRGQIEAAKALGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTITLLEVTGLARQLVSETFAPYEVFIAAGAFYLLLTLLITQGFQMLETRWTPTANRPPPAQPVPRRANGKPPLASAET
SIO_010081: AMC88_RS26220
subclass of: SO_0000673
so part of: AMC88_RS26220
location: complement(213437..214186)
location: region:213437-214186:-1
so has part: feature:213437-214186:-1:exon

WP_016737468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213437-214186:-1:exon

AMC88_RS26225
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26225
old locus tag: AMC88_PC00194
so part of: sequence
location: complement(214191..214856)
location: region:214191-214856:-1
so has part: feature:214191-214856:-1:exon
subclass of: SO_0000010

45960520
type: Gene
SIO_000068: ncbigene

position:214191:-1
position: 214191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214856:-1
position: 214856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214191-214856:-1:exon

AMC88_RS26225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26225
old locus tag: AMC88_PC00194
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737469.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO process: GO:0015837 - amine transport [Evidence IEA]
note: The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease subunit
translation: MYAFVDQFLSGLKNTLLVFALSCAFGTLLGLLIAVLRNSTRKSVSSCMRAYTGIIRGVPELLIILLTYFGGTALLSAIAGGYIEINAFAAGVAALTVVFSGYAAEIFRGAINAVAPGQREAAAALGLSNAQIWFLIIIPQMIPIALPAFCNLCISLIKDTSLISVVGLTDVMRVAYIGAGSLRAPLPFYLAASAIYLALTSLSLLSFRLLERRYSLPAMKG
SIO_010081: AMC88_RS26225
subclass of: SO_0000673
so part of: AMC88_RS26225
location: complement(214191..214856)
location: region:214191-214856:-1
so has part: feature:214191-214856:-1:exon

WP_016737469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214191-214856:-1:exon

AMC88_RS26230
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26230
old locus tag: AMC88_PC00195
so part of: sequence
location: 215099..216010
location: region:215099-216010:1
so has part: feature:215099-216010:1:exon
subclass of: SO_0000010

45960521
type: Gene
SIO_000068: ncbigene

position:215099:1
position: 215099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216010:1
position: 216010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215099-216010:1:exon

AMC88_RS26230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26230
old locus tag: AMC88_PC00195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MDVTDSGVKIRHLQILREVMRAGSERLAAQMLRITQPAVSQNIKQLEETVGFALFRRENNRLVPTVKAWEFLRTIDAAFAGLDRIGPSIDFLRNNDTRMIGIAAPSAFSFATLPKVVKRIRERSRSYAVQVKSGTYEQIADHVLNGRSDLGISRLPLDERILDWVPVGSATNVCLFPANHRFAAQQLVTAEDLASEAIIDIDPQIASHQMSVNALRYMGTAPDIAVEYDANGHDIGYVMAGIGVSITNEIIASEYAEFDVAFREFQPGATYHYVVVWQKDRKLSDSLRFALEEIVAALTDRAA
SIO_010081: AMC88_RS26230
subclass of: SO_0000673
so part of: AMC88_RS26230
location: 215099..216010
location: region:215099-216010:1
so has part: feature:215099-216010:1:exon

WP_042120104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215099-216010:1:exon

AMC88_RS34200
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34200
pseudo: true
so part of: sequence
location: 216184..>216361
location: region:216184-216361:1
so has part: feature:216184-216361:1:exon
subclass of: SO_0000010

70363074
type: Gene
SIO_000068: ncbigene

position:216184:1
position: 216184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216361:1
position: 216361
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216184-216361:1:exon

AMC88_RS34200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011970797.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: AMC88_RS34200
subclass of: SO_0000673
so part of: AMC88_RS34200
location: 216184..>216361
location: region:216184-216361:1
so has part: feature:216184-216361:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:216184-216361:1:exon

AMC88_RS33345
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33345
pseudo: true
so part of: sequence
location: complement(216571..>216681)
location: region:216571-216681:-1
so has part: feature:216571-216681:-1:exon
subclass of: SO_0000010

45961735
type: Gene
SIO_000068: ncbigene

position:216571:-1
position: 216571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216681:-1
position: 216681
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216571-216681:-1:exon

AMC88_RS33345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611363.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: AMC88_RS33345
subclass of: SO_0000673
so part of: AMC88_RS33345
location: complement(216571..>216681)
location: region:216571-216681:-1
so has part: feature:216571-216681:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:216571-216681:-1:exon

AMC88_RS32465
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32465
old locus tag: AMC88_PC00196
so part of: sequence
location: complement(216740..216934)
location: region:216740-216934:-1
so has part: feature:216740-216934:-1:exon
subclass of: SO_0000010

45961650
type: Gene
SIO_000068: ncbigene

position:216740:-1
position: 216740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216934:-1
position: 216934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216740-216934:-1:exon

AMC88_RS32465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32465
old locus tag: AMC88_PC00196
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010068053.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDQFATADNTSAAARRREARIAKGYSLEDLAIATGLTVEEIAAAEEPLQIVPQHHLERIEHVIS
SIO_010081: AMC88_RS32465
subclass of: SO_0000673
so part of: AMC88_RS32465
location: complement(216740..216934)
location: region:216740-216934:-1
so has part: feature:216740-216934:-1:exon

WP_010068053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216740-216934:-1:exon

AMC88_RS26240
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26240
old locus tag: AMC88_PC00197
so part of: sequence
location: 217409..217585
location: region:217409-217585:1
so has part: feature:217409-217585:1:exon
subclass of: SO_0000010

45960522
type: Gene
SIO_000068: ncbigene

position:217409:1
position: 217409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217585:1
position: 217585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217409-217585:1:exon

AMC88_RS26240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26240
old locus tag: AMC88_PC00197
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008536033.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3606 domain-containing protein
translation: MATTSKARSQDRARVAGGQDHEVKYEARKEGISKEAVKKTVKNVGNSRKKVEAELDRH
SIO_010081: AMC88_RS26240
subclass of: SO_0000673
so part of: AMC88_RS26240
location: 217409..217585
location: region:217409-217585:1
so has part: feature:217409-217585:1:exon

WP_004668584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217409-217585:1:exon

AMC88_RS34205
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34205
pseudo: true
so part of: sequence
location: 218470..>218703
location: region:218470-218703:1
so has part: feature:218470-218703:1:exon
subclass of: SO_0000010

70363075
type: Gene
SIO_000068: ncbigene

position:218470:1
position: 218470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218703:1
position: 218703
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218470-218703:1:exon

AMC88_RS34205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34205
inference: COORDINATES: protein motif:HMM:NF036442.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DUF5372 family protein
SIO_010081: AMC88_RS34205
subclass of: SO_0000673
so part of: AMC88_RS34205
location: 218470..>218703
location: region:218470-218703:1
so has part: feature:218470-218703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218470-218703:1:exon

AMC88_RS26245
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26245
old locus tag: AMC88_PC00198
so part of: sequence
location: 218778..219269
location: region:218778-219269:1
so has part: feature:218778-219269:1:exon
subclass of: SO_0000010

45960523
type: Gene
SIO_000068: ncbigene

position:218778:1
position: 218778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219269:1
position: 219269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218778-219269:1:exon

AMC88_RS26245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26245
old locus tag: AMC88_PC00198
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MPDYSVAVAAVADCTFNTPGKAAQRYVCRGTFGAMAVGNCIGFGGMRVDRAVAQEVLERLQPLGIEAALRAMEAHTQRHSDNQQQLENLIKQAQYEAARARRQYDAVDPGNRLVAGELERRWNEKLILLRDLEVQFEMLSTDRNTPALSADDRTRLMMLGSDL
SIO_010081: AMC88_RS26245
subclass of: SO_0000673
so part of: AMC88_RS26245
location: 218778..219269
location: region:218778-219269:1
so has part: feature:218778-219269:1:exon

WP_185185232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218778-219269:1:exon

AMC88_RS26250
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26250
old locus tag: AMC88_PC00199
so part of: sequence
location: 219368..219865
location: region:219368-219865:1
so has part: feature:219368-219865:1:exon
subclass of: SO_0000010

45960524
type: Gene
SIO_000068: ncbigene

position:219368:1
position: 219368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219865:1
position: 219865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219368-219865:1:exon

AMC88_RS26250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26250
old locus tag: AMC88_PC00199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489515.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MALVIHWQGGDHTRMTVKKNKIGQTRWAVKADVVDLVRNLARQLPDLSIAAILNRSGKRTGHGASWTRSHVCSLRNIHGISVYREGERAERGERTLDEAADILKVSRATAYRMVSSGVLPARQLCTGAPWIIQLSDLQHETVRREADARRSRRPISQDPVQNPLL
SIO_010081: AMC88_RS26250
subclass of: SO_0000673
so part of: AMC88_RS26250
location: 219368..219865
location: region:219368-219865:1
so has part: feature:219368-219865:1:exon

WP_010005427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219368-219865:1:exon

AMC88_RS33350
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33350
pseudo: true
so part of: sequence
location: complement(219847..>220036)
location: region:219847-220036:-1
so has part: feature:219847-220036:-1:exon
subclass of: SO_0000010

45961736
type: Gene
SIO_000068: ncbigene

position:219847:-1
position: 219847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220036:-1
position: 220036
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219847-220036:-1:exon

AMC88_RS33350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017270940.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AMC88_RS33350
subclass of: SO_0000673
so part of: AMC88_RS33350
location: complement(219847..>220036)
location: region:219847-220036:-1
so has part: feature:219847-220036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219847-220036:-1:exon

AMC88_RS26255
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26255
old locus tag: AMC88_PC00200
so part of: sequence
location: 220499..220954
location: region:220499-220954:1
so has part: feature:220499-220954:1:exon
subclass of: SO_0000010

45960525
type: Gene
SIO_000068: ncbigene

position:220499:1
position: 220499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220954:1
position: 220954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220499-220954:1:exon

AMC88_RS26255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26255
old locus tag: AMC88_PC00200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010024976.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phasin
translation: MTKISERSFETIENPGSSSLKVPDQFGASVEKGNKKVTEAFLKFASGAEATQKMLPPILETTSLFGNELWWKTIAALQADAEASFSHLQALLGANSPSQILEQQSTFFRKRVETSLQHAKEVRVLSSRAVEEISKPVKDAFDKVLTDLKAT
SIO_010081: AMC88_RS26255
subclass of: SO_0000673
so part of: AMC88_RS26255
location: 220499..220954
location: region:220499-220954:1
so has part: feature:220499-220954:1:exon

WP_010024976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220499-220954:1:exon

AMC88_RS26260
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26260
so part of: sequence
location: 221218..221517
location: region:221218-221517:1
so has part: feature:221218-221517:1:exon
subclass of: SO_0000010

45960526
type: Gene
SIO_000068: ncbigene

position:221218:1
position: 221218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221517:1
position: 221517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221218-221517:1:exon

AMC88_RS26260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004680434.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDSRRDIAERVIARWKARGIRIDEDPGFMELVALWTAGSIASGEMRRRYSALQRERSLSRSNPLDVYPCDEGAEVDHRSIAIPDDEPDERGGLGLPAQG
SIO_010081: AMC88_RS26260
subclass of: SO_0000673
so part of: AMC88_RS26260
location: 221218..221517
location: region:221218-221517:1
so has part: feature:221218-221517:1:exon

WP_016737472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221218-221517:1:exon

AMC88_RS26265
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26265
old locus tag: AMC88_PC00202
pseudo: true
so part of: sequence
location: complement(<221904..>222107)
location: region:221904-222107:-1
so has part: feature:221904-222107:-1:exon
subclass of: SO_0000010

45960527
type: Gene
SIO_000068: ncbigene

position:221904:-1
position: 221904
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:222107:-1
position: 222107
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221904-222107:-1:exon

AMC88_RS26265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26265
old locus tag: AMC88_PC00202
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018010297.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AMC88_RS26265
subclass of: SO_0000673
so part of: AMC88_RS26265
location: complement(<221904..>222107)
location: region:221904-222107:-1
so has part: feature:221904-222107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221904-222107:-1:exon

AMC88_RS26270
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26270
old locus tag: AMC88_PC00203
so part of: sequence
location: complement(222146..222451)
location: region:222146-222451:-1
so has part: feature:222146-222451:-1:exon
subclass of: SO_0000010

45960528
type: Gene
SIO_000068: ncbigene

position:222146:-1
position: 222146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222451:-1
position: 222451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222146-222451:-1:exon

AMC88_RS26270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26270
old locus tag: AMC88_PC00203
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004680432.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDEKNSPIVCISGVDERKLGAALIAVQSAFSVAIAELSKLHKGNSPQWFEDLEEVVIANAKGTVTEGISLDVEVESLKFGIDVLRAILDVSRVELGFAAKE
SIO_010081: AMC88_RS26270
subclass of: SO_0000673
so part of: AMC88_RS26270
location: complement(222146..222451)
location: region:222146-222451:-1
so has part: feature:222146-222451:-1:exon

WP_004680432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222146-222451:-1:exon

AMC88_RS26275
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26275
old locus tag: AMC88_PC00204
so part of: sequence
location: complement(222978..223949)
location: region:222978-223949:-1
so has part: feature:222978-223949:-1:exon
subclass of: SO_0000010

45960529
type: Gene
SIO_000068: ncbigene

position:222978:-1
position: 222978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223949:-1
position: 223949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222978-223949:-1:exon

AMC88_RS26275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26275
old locus tag: AMC88_PC00204
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737474.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYGRRQGGVGNSSEQGGEDTFNWVEGLTGSSSGEAALKEILLAWAEDGQQEQDEDRHEAMARIEAWTETRNFRAPLNLTSLSLTALPPTLPAGLQRLNANDNRLGRLPNNLPPGLRKLSACDNQLTTLPEVLPDMLETLYVDGNRLTRLPNELPSGLKYLYVNHNRLTSLPDNLPPELRELHVTRNEIAHLPENLPLELTDLRAELNNIIRLPERLPAKLTRLEVPHNELTSLPEDLPATLKWLSTDSNELTHLPPNLPRGLEELSVRGNNLRGLGDGRTALPYILSQLPPHCKVYLNNNPLPDRLRAHLSAQSGTSLPQIFL
SIO_010081: AMC88_RS26275
subclass of: SO_0000673
so part of: AMC88_RS26275
location: complement(222978..223949)
location: region:222978-223949:-1
so has part: feature:222978-223949:-1:exon

WP_004680431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:222978-223949:-1:exon

AMC88_RS34540
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34540
old locus tag: AMC88_PC00205
so part of: sequence
location: 224080..224208
location: region:224080-224208:1
so has part: feature:224080-224208:1:exon
subclass of: SO_0000010

74309081
type: Gene
SIO_000068: ncbigene

position:224080:1
position: 224080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224208:1
position: 224208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224080-224208:1:exon

AMC88_RS34540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34540
old locus tag: AMC88_PC00205
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIFIATLNNPTIDMLRKLGLTGMASAYQELETQIEARHLRAW
SIO_010081: AMC88_RS34540
subclass of: SO_0000673
so part of: AMC88_RS34540
location: 224080..224208
location: region:224080-224208:1
so has part: feature:224080-224208:1:exon

WP_010068000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224080-224208:1:exon

AMC88_RS26280
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: tssI
locus tag: AMC88_RS26280
old locus tag: AMC88_PC00206
so part of: sequence
location: complement(224665..226692)
location: region:224665-226692:-1
so has part: feature:224665-226692:-1:exon
subclass of: SO_0000010

45960530
type: Gene
SIO_000068: ncbigene

position:224665:-1
position: 224665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226692:-1
position: 226692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224665-226692:-1:exon

AMC88_RS26280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: tssI
locus tag: AMC88_RS26280
old locus tag: AMC88_PC00206
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004680430.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system tip protein TssI/VgrG
translation: MVESRIESLLRHNRFVAVTSAASELNEISLRRLSGTERLGEPFLYEVKLASRNPVQNFATIPGQNLTIGLKLKDSQTRFFNGVVTRFQYLGLDDTEHLNYVAQVRPWISLLEHRSNSRVFQNKTSIEIITTIFREHKGNFKNQTARRFPQRPYCVQYDETDLAFVSRLMEQDGIYYYFEHAEDQHDLVLVDNAASHMACTPEIVETHHNLRPARSLYQEDVILHWDEVVSLQPNKVVLRDYDHEKPMAELTSVARVPPVRTGGIPPCKLTGSAITRPRESVAVRTGETSSASSGCTAMREVFEYPGQYTKKSDGDFYATIRAEELACNAYRARIESTARQITTGSLFKAANPFYYGQVGSRPKPTDRFLAVGQDFTVIGEVGDDLTADTVGGKGERFLYHSNVEIIPATTQYRPRRRTPARLIHGPQTAVVVGPEGESIATDKYGRVKVQFFWDREGGKNENSSCWIRVAQNFAGKGFGNLVVPRIGHEVVVDFIHGNPDTPLVTGVVYNGSNLPPETLPTDKTRSTFRTHTDGGAANAYNELRFEDKQGREEVYLKAQKNHTVEVGNIYSIDVKRHFLLTSGGAAPDSPAAAALGSRVEVTPDKIRLVVSGRTGPQAIEISGDGIAIIGTMIGVMATPPRLGSIVSMPPPTPGPPTPSIMKLIATLGLPPVTPE
SIO_010081: AMC88_RS26280
subclass of: SO_0000673
so part of: AMC88_RS26280
location: complement(224665..226692)
location: region:224665-226692:-1
so has part: feature:224665-226692:-1:exon

WP_004680430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224665-226692:-1:exon

AMC88_RS26285
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: tssG
locus tag: AMC88_RS26285
old locus tag: AMC88_PC00207
so part of: sequence
location: complement(227230..228456)
location: region:227230-228456:-1
so has part: feature:227230-228456:-1:exon
subclass of: SO_0000010

45960531
type: Gene
SIO_000068: ncbigene

position:227230:-1
position: 227230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228456:-1
position: 228456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227230-228456:-1:exon

AMC88_RS26285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: tssG
locus tag: AMC88_RS26285
old locus tag: AMC88_PC00207
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004680429.1
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system baseplate subunit TssG
translation: MADDGRPPGDPLISGALGDFLSSLRAEPHACDFFQALRRIDAICSDRPRLGESSGPSLDRVRIAQQPSLAFPTRSIAGVTAHEENDPVISTYAFGLFGPHGPLPLHLTEYALLRQHNAADETLIRFADTFHHRMASFFFRAWAEGEPTVSYDRPQEDRFALQLGALAGFGMTSLRARDAMPDLAKLHFTGRLASHTRNAEGLAAILASFVEAPVDIREFVPKWVDLPRISLCLLGRDPATGTLNSNAIAGARVRVWHHRFRLIVGPLSLAHYESLLPAAPGLKSIAEIICNYLGDELDWEINLVLRQEQVPEVQLGRCGRLGWSSWMGKRKTRQHADDLTTTPTDRGPPAAAWHSPETDIHDAAGPLDLLFGRGEDLLGEIDLERVNGPRNLDTKCGGTAGGGLEGPL
SIO_010081: AMC88_RS26285
subclass of: SO_0000673
so part of: AMC88_RS26285
location: complement(227230..228456)
location: region:227230-228456:-1
so has part: feature:227230-228456:-1:exon

WP_008536038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227230-228456:-1:exon

AMC88_RS26290
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: tssF
locus tag: AMC88_RS26290
old locus tag: AMC88_PC00208
so part of: sequence
location: complement(228420..230306)
location: region:228420-230306:-1
so has part: feature:228420-230306:-1:exon
subclass of: SO_0000010

45960532
type: Gene
SIO_000068: ncbigene

position:228420:-1
position: 228420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230306:-1
position: 230306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228420-230306:-1:exon

AMC88_RS26290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: tssF
locus tag: AMC88_RS26290
old locus tag: AMC88_PC00208
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004680428.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system baseplate subunit TssF
translation: MDPRLLRLYNDELAYMREIGAEFARAFPKVAARLGMESAEVADPYVERLLEGFAFMAARVQLKLQSRFPEFTQHLLEMVYPHFLPPLPSMTIVRFEPDQDAGRLENGYLVPRGTKLLGRLAPGAVTHCEFRTAHDVHLWPIVVSAADYFSTPGQIAALDLPARQDAKAALRLRLRTTNGMPFNKLGLEALTLHLTGPGGIGAALAEQLLGDACNIIARPVGRPIPWQEKIPVHALQQRGLEPSCALLPEVPRSFDGYRLLQEYFALAERTLFVEVSGLADAVALSTAETLEIVFALRRVEPRLERQLGPQNIVLFATPAINLFERQADLVHVSDKNTEHHVIVDRMRPLDFEVHSILEMSGDGAKNEAAPVRFYPFYSISAHGQEEQHSRYYAIRREQRLMSEHQRLNGARTGYIGSETFVSLVDRQAAPYSAELRHLSVNCLCSNRDLALLLPIGRDETDFTLEIGAPVTATRCVSPPSRPRHSFANGDITWRLISHLSLNYLSISNSDRNDHRGAEALRELLRLYVDPVNAFASRQIDGIREIRSRPAVRRLSSGGQAAVARGIEVGIILDEAAFEGVGIFPLASVLNQFFAKYVSINSFTEMVVSTLQRGEVMRWPTMAGRRAIL
SIO_010081: AMC88_RS26290
subclass of: SO_0000673
so part of: AMC88_RS26290
location: complement(228420..230306)
location: region:228420-230306:-1
so has part: feature:228420-230306:-1:exon

WP_064830110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228420-230306:-1:exon

AMC88_RS26295
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: tssE
locus tag: AMC88_RS26295
old locus tag: AMC88_PC00209
so part of: sequence
location: complement(230306..230809)
location: region:230306-230809:-1
so has part: feature:230306-230809:-1:exon
subclass of: SO_0000010

45960533
type: Gene
SIO_000068: ncbigene

position:230809:-1
position: 230809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230306-230809:-1:exon

AMC88_RS26295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: tssE
locus tag: AMC88_RS26295
old locus tag: AMC88_PC00209
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004680427.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system baseplate subunit TssE
translation: MGRDVKRDLVQPSLLDRLTDDEPRSSCEAQDKRSFSVRQLEEVILRDVSWLLNTNQLGATVDLQAYPHVAASALNYGAWPLSGQIREGMDKSALREAIIESLQRFEPRLLPDTLKVTVLDDGQGCGTFRFRIEADLWAQPLPVRMVMRTEVDSELESARVHLGTEIS
SIO_010081: AMC88_RS26295
subclass of: SO_0000673
so part of: AMC88_RS26295
location: complement(230306..230809)
location: region:230306-230809:-1
so has part: feature:230306-230809:-1:exon

WP_004680427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230306-230809:-1:exon

AMC88_RS26300
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26300
old locus tag: AMC88_PC00210
so part of: sequence
location: complement(230896..231429)
location: region:230896-231429:-1
so has part: feature:230896-231429:-1:exon
subclass of: SO_0000010

45960534
type: Gene
SIO_000068: ncbigene

position:230896:-1
position: 230896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231429:-1
position: 231429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230896-231429:-1:exon

AMC88_RS26300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26300
old locus tag: AMC88_PC00210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636660.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system tube protein Hcp
translation: MAFDAVIKFTQASKDGILPKGESIILKDGITLADEWSFSLENKLNIGPHTAGAGAGKAEFEVFTIKKQVDTSSPSLYVACGRGAHFNSVELKLFKATGSGQATSESNLFLHWSFNMLVVEKVEWSYAEEAPEETITFRFGACKVIYYRQDEKGALTKAGEGIWNQIANSTDFNRLVG
SIO_010081: AMC88_RS26300
subclass of: SO_0000673
so part of: AMC88_RS26300
location: complement(230896..231429)
location: region:230896-231429:-1
so has part: feature:230896-231429:-1:exon

WP_004680426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230896-231429:-1:exon

AMC88_RS26305
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: tssC
locus tag: AMC88_RS26305
old locus tag: AMC88_PC00211
so part of: sequence
location: complement(231545..233032)
location: region:231545-233032:-1
so has part: feature:231545-233032:-1:exon
subclass of: SO_0000010

45960535
type: Gene
SIO_000068: ncbigene

position:231545:-1
position: 231545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233032:-1
position: 233032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231545-233032:-1:exon

AMC88_RS26305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: tssC
locus tag: AMC88_RS26305
old locus tag: AMC88_PC00211
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004680425.1
GO component: GO:0033104 - type VI protein secretion system complex [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system contractile sheath large subunit
translation: MMPADATDVQVATVDLGDFTRMLRFEFKIRSDHSRDLVESAVRTLAEQALQNTSLISDDVVTTIQAMIASIDQKLSAQLNEILHHENFQRVESAWRGLHHLAINTETDETLKIRVLPVSKVEMSRTLRKYKGVTWDQSPLFKKIYEDEYGQIGGEPYGCLIADYYFDHTPPDVELLSGLAQIAAASHSPLISAVSPHLLQMDSWRELANPRDITKIFLTPEHAPWRAFRESENSRYVALTLPRTLGRLPYGAKTNPVDEFAFEEDTDGGDSEKYLWTNAAYAMGVNITRSFKLYGWLSRIRGVESGGLVEGLPVHTFRSDDGGVDLKCPTEIAISDRREAELSKNGLLPLLHRKNTDLGVFIGAQTINKPVKYEDPDASANAELSARLPYIFATCRFAHYLKCMVRDKIGTFKERHEVEEWLNQWIQGYVHPSPELGSEESKAQQPLSSAEVKVEEVEDNPGYYVARFYMRPHYQLEGLTISLRLVSRLPSARKD
SIO_010081: AMC88_RS26305
subclass of: SO_0000673
so part of: AMC88_RS26305
location: complement(231545..233032)
location: region:231545-233032:-1
so has part: feature:231545-233032:-1:exon

WP_004680425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231545-233032:-1:exon

AMC88_RS26310
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: tssB
locus tag: AMC88_RS26310
old locus tag: AMC88_PC00212
so part of: sequence
location: complement(233035..233589)
location: region:233035-233589:-1
so has part: feature:233035-233589:-1:exon
subclass of: SO_0000010

45960536
type: Gene
SIO_000068: ncbigene

position:233035:-1
position: 233035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233589:-1
position: 233589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233035-233589:-1:exon

AMC88_RS26310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: tssB
locus tag: AMC88_RS26310
old locus tag: AMC88_PC00212
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737476.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system contractile sheath small subunit
translation: MTKASSQKFIARVRPPRVQIEYDVETYGSQKKVQLPFVVGVMSDLAGNAAEPLAPVAERKMMEIDIDNFDDRLRSLRPRVVMRVPNLLTGEGQLAVDLTFERLEDFSPAAVARKVDSLSRLLEARTELSNLLAYMDGKNGAEELLTHFLADSALLSALGNGIETEKPDALVAAPPLPSPDTEEN
SIO_010081: AMC88_RS26310
subclass of: SO_0000673
so part of: AMC88_RS26310
location: complement(233035..233589)
location: region:233035-233589:-1
so has part: feature:233035-233589:-1:exon

WP_016737476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233035-233589:-1:exon

AMC88_RS26315
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: tssA
locus tag: AMC88_RS26315
old locus tag: AMC88_PC00213
so part of: sequence
location: complement(233625..234617)
location: region:233625-234617:-1
so has part: feature:233625-234617:-1:exon
subclass of: SO_0000010

45960537
type: Gene
SIO_000068: ncbigene

position:233625:-1
position: 233625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234617:-1
position: 234617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233625-234617:-1:exon

AMC88_RS26315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: tssA
locus tag: AMC88_RS26315
old locus tag: AMC88_PC00213
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004680423.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system protein TssA
translation: MLDADHLLKPISDGNACGDALDYDLSFLELEIASHGKPHQQIGDSIATEEAPDWTEVWRLGLDLSARTKDLRVGILLTRSALSQFGFSGLSRGLELLAAYVELYWSELHPRPDPEDDEDQTVRLNALASLCDLSGLLAEIRQVPLTSSRQFGTFTLRDWAGALRSQSTEIDRSTIEHAFIDTDPLQLEQISTGLHASLAAATHLDASVRQHVASDEAVRFDPLIVLLTQAKDLVDAHRKRAQPAAPASPLPDSSKASYPEVIRNRDDVVEILGRICHWYQVNEPASPLPALLERAQRLVSKDFMALIKELAPEGVAQYRSIAGLAVGEGT
SIO_010081: AMC88_RS26315
subclass of: SO_0000673
so part of: AMC88_RS26315
location: complement(233625..234617)
location: region:233625-234617:-1
so has part: feature:233625-234617:-1:exon

WP_004680423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233625-234617:-1:exon

AMC88_RS33355
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33355
pseudo: true
so part of: sequence
location: <234744..>235134
location: region:234744-235134:1
so has part: feature:234744-235134:1:exon
subclass of: SO_0000010

45961737
type: Gene
SIO_000068: ncbigene

position:234744:1
position: 234744
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:235134:1
position: 235134
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234744-235134:1:exon

AMC88_RS33355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611552.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: AMC88_RS33355
subclass of: SO_0000673
so part of: AMC88_RS33355
location: <234744..>235134
location: region:234744-235134:1
so has part: feature:234744-235134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:234744-235134:1:exon

AMC88_RS26320
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26320
old locus tag: AMC88_PC00214
so part of: sequence
location: complement(236316..238595)
location: region:236316-238595:-1
so has part: feature:236316-238595:-1:exon
subclass of: SO_0000010

45960538
type: Gene
SIO_000068: ncbigene

position:236316:-1
position: 236316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238595:-1
position: 238595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236316-238595:-1:exon

AMC88_RS26320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26320
old locus tag: AMC88_PC00214
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489520.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGASTGDLVNRAAFRTVSAQDQARLDEIARQTPRQSRQSKGAWADALKAAHPNLSAADAAVIVGVVKRVIARRAAYRTVSAQDRARLDEIKAATPQLPGQSKGAWADALKAAHPDLSAADAAITVGSFKDDIARRTAFRTVSAQDQARLDEIARQTPQLPGQSKGAWADALKAAHPDLSAADAAIIVGAVKQDIAKRAAFQTVSAQDQARLDEIAAVTPRLPGQSKGAWADALKAAHPDLSAADAAIIVNAVKQDIAKRTAFQTVSAQDHARLDEIARQTPQLQGQSKGAWADALKAAHPDLSAADAAAIVGAVKRVIARRAAFQTVSAQDQARLDEIARQTPRLPGQSKGAWADALKAAHPDLSAADAAIIVGSVKHNIVKRAAFRTVSAQDQARLDEIARQTPRQSRQSKGAWADALKAAHPDLSAADAATIVGALKDDIAVRAAFRTVSAQDQARLDEIAAVTPRQGRSNAAWADALKAAHPDLSAADAATIVGAAKDEIARRAAFRTVSAQDQARLDELARQTPQLPGQSNAAWADALKAAHPNLSAADAAVIVGAIKQDIAKRAAFRTVSAQDQARLDEIAAATPRQGGSNAAWADALKAAHPDLSAADAATILGTFRDDIARRAAFRTVSAQDQARLDEIKAATPQLPGQSKGAWADALKAAHPDLSAADAAIVVGAVRRDIAVRTAFQTVSAQDQARLDEIARQTPQLPGQSKGAWADALKAAHPDLSAADAAIIVGASKKRIARRAAFKVI
SIO_010081: AMC88_RS26320
subclass of: SO_0000673
so part of: AMC88_RS26320
location: complement(236316..238595)
location: region:236316-238595:-1
so has part: feature:236316-238595:-1:exon

WP_064820044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236316-238595:-1:exon

AMC88_RS32505
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32505
pseudo: true
so part of: sequence
location: complement(239951..>240510)
location: region:239951-240510:-1
so has part: feature:239951-240510:-1:exon
subclass of: SO_0000010

45961653
type: Gene
SIO_000068: ncbigene

position:239951:-1
position: 239951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240510:-1
position: 240510
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239951-240510:-1:exon

AMC88_RS32505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477253.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AMC88_RS32505
subclass of: SO_0000673
so part of: AMC88_RS32505
location: complement(239951..>240510)
location: region:239951-240510:-1
so has part: feature:239951-240510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239951-240510:-1:exon

AMC88_RS26330
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: tssK
locus tag: AMC88_RS26330
old locus tag: AMC88_PC00216
so part of: sequence
location: 241152..242507
location: region:241152-242507:1
so has part: feature:241152-242507:1:exon
subclass of: SO_0000010

45960539
type: Gene
SIO_000068: ncbigene

position:241152:1
position: 241152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242507:1
position: 242507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241152-242507:1:exon

AMC88_RS26330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: tssK
locus tag: AMC88_RS26330
old locus tag: AMC88_PC00216
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010069402.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system baseplate subunit TssK
translation: MSWNNRVVWSEGLFLRPQHFQQADRHVEQLVRSRTAVLHGYGWGISELRLNRELLGLGKIAIEAARGVLEDGMPFSIPDEANQPTPYDVPPDFRDSLIHLAVPFYQPGALETDAQAGIDVPIRFAVSTEDVVDTNAGERGSASIDVARLDFRLLPDAADRSGYTCIPIARIIEVRADRQIILDETHVPPTPDCASSRVLSNYITEITGLLHHRGEALATRVSQSGTNRVAELADFLLLQAINRYEPYFCHLSKAAVVNPESLYVLMLQLAGELATFARVDKRAPTLGVYKHDSLAEAFLPVIQSIRASLGAVIEQTAVPVPLQRQKYGVHVAEVADRSLFTTSSFVLAARADIEVERLRREFPSQIKIGPAEKITELVNVALPGIIINPLPVAPRQIPFHVGFSYFEIDQNSRFWKDMPQSAGLALHVAGDFPNLEMALWAIRAGQNPHLS
SIO_010081: AMC88_RS26330
subclass of: SO_0000673
so part of: AMC88_RS26330
location: 241152..242507
location: region:241152-242507:1
so has part: feature:241152-242507:1:exon

WP_016737477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241152-242507:1:exon

AMC88_RS26335
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26335
old locus tag: AMC88_PC00217
so part of: sequence
location: 242515..243735
location: region:242515-243735:1
so has part: feature:242515-243735:1:exon
subclass of: SO_0000010

45960540
type: Gene
SIO_000068: ncbigene

position:242515:1
position: 242515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243735:1
position: 243735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242515-243735:1:exon

AMC88_RS26335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26335
old locus tag: AMC88_PC00217
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489523.1
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FHA domain-containing protein
translation: MPLTLRVHSNRCSFPEYLVPGDAAGGLTTSRAGNSLVLPDDQQMVSKSHCSIECMARRYVLIDRGRDDTCQNDEAVPLPSEAPVARKTSDVIQIGAYMTDVVAVSPSISIAESAAEPEGQLAATSEELSLLGPLETASSLLAGNCTRGEEALLDLRDGEFLPLPFLGTRLDALAGMMRSPWDIYADSVPDRAPILTQPKVEQSSRQESSSGGHGFPCRLRLIIGRCPECRHRKRAGSCRENASVFRRAAQHTLRARAGEQLFRNKSSDEKTLSLVPDVGEALRAVLCNDSSGSLRGDLAVEQAFTDRGTHDVSFAAVQKALSSVRARLSLAGIEKAMGRPRSLLHRNHKARNRSAYVRVFNDVVSSIETDLLRSFGADFARPVRERSRPARRSHDESVRSEGKWAG
SIO_010081: AMC88_RS26335
subclass of: SO_0000673
so part of: AMC88_RS26335
location: 242515..243735
location: region:242515-243735:1
so has part: feature:242515-243735:1:exon

WP_210256236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242515-243735:1:exon

AMC88_RS26340
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: icmH
locus tag: AMC88_RS26340
old locus tag: AMC88_PC00218
so part of: sequence
location: 243735..245024
location: region:243735-245024:1
so has part: feature:243735-245024:1:exon
subclass of: SO_0000010

45960541
type: Gene
SIO_000068: ncbigene

position:245024:1
position: 245024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243735-245024:1:exon

AMC88_RS26340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: icmH
locus tag: AMC88_RS26340
old locus tag: AMC88_PC00218
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489524.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IVB secretion system protein IcmH/DotU
translation: MVVIEETMPKSQPLVLLHAEEQLAVPSPSSPVADELTWEMLALDRLNPLVAAAAALLGLSAQLKSSASHIDVEALRLRVLREIDAFERRITPLGLPSRAIKVCKYALCATIDDIVLNTAWGSNSVWTTRSLVGSLFSDTWGGERFFDLLTQLKNEPAINIELLELLYYCMRLGFEGRYRVTAGGAAELSVLCEDVYRLIRAARGDFERELSPHWRRNSNNPKPRRTIVPIWAVVAFGAGLLLSIYTGLLHALNARADAVFNDIATLPPNGVVRSARIALPPKVVMSSDRLRNFLEPEIREGLVTVSEDPQQIVVIIRASGMFDSASPEVKKMFLPLLLRIGRSLNGESGSVLLTGHTDAIPVQSLAFPSNDSLSLARASAAAEIIKSMMDDPGRVREEGRGSGEPVASNHTPEGRARNRRIQIIITKTQ
SIO_010081: AMC88_RS26340
subclass of: SO_0000673
so part of: AMC88_RS26340
location: 243735..245024
location: region:243735-245024:1
so has part: feature:243735-245024:1:exon

WP_008536065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243735-245024:1:exon

AMC88_RS26345
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: tssM
locus tag: AMC88_RS26345
old locus tag: AMC88_PC00219
so part of: sequence
location: 245034..248639
location: region:245034-248639:1
so has part: feature:245034-248639:1:exon
subclass of: SO_0000010

45960542
type: Gene
SIO_000068: ncbigene

position:245034:1
position: 245034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248639:1
position: 248639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245034-248639:1:exon

AMC88_RS26345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: tssM
locus tag: AMC88_RS26345
old locus tag: AMC88_PC00219
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489525.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion system membrane subunit TssM
translation: MQSIKKALRWQWLRVGGAAIVCALIFTLGPHISVGGFAPLDSLRSQIAASMLIPVGYTVIYLIQSQLYKVQAYFEDLVQSRVSGALDAGGAEQKKGDPRPSDRSVGQASTLAERELEAIRHRFRETLTTLKGRRYAGGISRRWLYQRPWYVMIGPPNSGKTTAIVNSGLSFPMAARSGLRAAGGLAGTENCDWWITDDAVFVDTAGRYTVQEGDADRDKAVWRGLLRMLRRSRPRQPLNGVLVTIAISELNSTSEEVLADRARCIRERLLEVYRELRLQLPIYVLFTKSDLLAGFVEFFDDLGREGREAVWGFTFAQEASEDEGDPMAFAAAYDALVGRLNERLLERMQHESNLQRRALMFGFPQQVASLKHLTQQFLKEAFGGNSFQEPLMLRGVYFLSGTQIGMPFDRVANARSQTFEIAQPPCTALRGPGRNYFISRLLREVVFAEAGLVDANHRFDRRQRRIRYGAYTMIAAVIVTASVLWTFSYIRNVQLIESVRLMAGSYARGAEKLKLDRVESGDLRPILPLLQRLRDANGDSAGGRLSSSGLDQSKKIKVQTLAAYRRAVNTILLPRLMFRLETLLVERHDDDQFVYQALKVYLMLGQQGPLQRAVVKNWMAADWRVMFPAEADAGLRSALADHLDALMEGPLPHSELNGELIERSRAKLQTVSMARRVLDIIATSPEASRAPTWRLADHAGPLAQGVLARKSGQPLSEGVPGIYTRAGFYGTFLRLLPQVADAVAAEGWVLDSQVVAPIAAGDVSQKLRRSAADLYAQEFALRWDQLIGDMSIRPSGGIDDALRTLNTLSAPTSPMRLFLFAAAQELKLKQPPAPEDGLTKGDSVPQGEVLPSELEALFRSQPAADTPEAHVQLYMGDHFRWLHQLVEVPSNSQAGAQAPIDSALRDLGELYRSLSQAQGLAGSNILEHNGQAGVAIQQIEAGAADLPEPIRQWILGLSRHSSDLTVSGMRRGLASGWAGGPGDLCRRATEGRYPFASGSRRDIPLSDFARLFGRKAEIDTFFAENLSPFVDKSKGSWQFRPTSGVDFPIGRNTLAQFQRAATIRDTMFDDAGQVSVGFLLTVAETDPLTDQVVVDIDGQRLEHRRGTAAAAMHFHWPTAGGVGGASVAFIGFQGATLSKSGHWALFRLLNEADKQPLGGGDLIQVRLVSGRHWAVFNLQPDSVMSPLSRNLLSEFRCPDFL
SIO_010081: AMC88_RS26345
subclass of: SO_0000673
so part of: AMC88_RS26345
location: 245034..248639
location: region:245034-248639:1
so has part: feature:245034-248639:1:exon

WP_012489525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245034-248639:1:exon

AMC88_RS26355
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26355
old locus tag: AMC88_PC00221
so part of: sequence
location: 248936..250552
location: region:248936-250552:1
so has part: feature:248936-250552:1:exon
subclass of: SO_0000010

45960544
type: Gene
SIO_000068: ncbigene

position:248936:1
position: 248936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250552:1
position: 250552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248936-250552:1:exon

AMC88_RS26355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26355
old locus tag: AMC88_PC00221
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489526.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGMKHNRTRAKKFLQLIDQTKNRADLEFCFAVGTVGDLRKPAVLVSKKKLNGLAQTLKNMPFEDDEDSSKENFSLLRRGTGRMNENGVILVKLADGGKAGFPQVQKVMKKYFVNFRMRLPDMQEAGILTEEDIQQFEMNAEENSQFLPPDDSEEFNRPMTALDSAEGNSAGSVEETEERSKREGGAELLEQLLPEVKEGIAAAAATISNHAVSLSAQIGAGQTAELSHLTTKIADWLQRVLAATPPEEQEATLHNFAGRLLLMLAYPENLRNLQYVDDMPDGAGQGETNGDRREEVVVNGIDLNRVPTGALDQDEVVESLFRLIKAKAQERQLSYPLENANSERIAKIVSSQWPKELGDAARRRAVVERLIAAVVPRLGNDDQLLVLLGIADQPERTKSIENSVESIIAIWQAHLDTALTLRDEVKSKINQMVDVEARGGTWRYVDDIFLQFGGELSDQLSAITERNGEALSSATERVRTTVQKKLDYLNGSDIVAMLDNPPIDIGPGTIGQTLREGLAAITDGLKRIETSRAAPAA
SIO_010081: AMC88_RS26355
subclass of: SO_0000673
so part of: AMC88_RS26355
location: 248936..250552
location: region:248936-250552:1
so has part: feature:248936-250552:1:exon

WP_012489526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248936-250552:1:exon

AMC88_RS26360
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26360
so part of: sequence
location: 250648..250890
location: region:250648-250890:1
so has part: feature:250648-250890:1:exon
subclass of: SO_0000010

45960545
type: Gene
SIO_000068: ncbigene

position:250648:1
position: 250648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250890:1
position: 250890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250648-250890:1:exon

AMC88_RS26360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008536071.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIR2 family protein
translation: MGQRSGEGAAHQQRLFFIGCRFNDQMLRTYARRIMTRSNAPRFAVLDAAAPTNNQRRFLAASPITLIDVPTGEAAARFIG
SIO_010081: AMC88_RS26360
subclass of: SO_0000673
so part of: AMC88_RS26360
location: 250648..250890
location: region:250648-250890:1
so has part: feature:250648-250890:1:exon

WP_008536071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250648-250890:1:exon

AMC88_RS33360
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33360
pseudo: true
so part of: sequence
location: 251714..>251992
location: region:251714-251992:1
so has part: feature:251714-251992:1:exon
subclass of: SO_0000010

45961738
type: Gene
SIO_000068: ncbigene

position:251714:1
position: 251714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251992:1
position: 251992
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251714-251992:1:exon

AMC88_RS33360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010875360.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: carbamoyltransferase N-terminal domain-containing protein
SIO_010081: AMC88_RS33360
subclass of: SO_0000673
so part of: AMC88_RS33360
location: 251714..>251992
location: region:251714-251992:1
so has part: feature:251714-251992:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251714-251992:1:exon

AMC88_RS26365
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26365
old locus tag: AMC88_PC00224
so part of: sequence
location: 252232..253242
location: region:252232-253242:1
so has part: feature:252232-253242:1:exon
subclass of: SO_0000010

45960546
type: Gene
SIO_000068: ncbigene

position:252232:1
position: 252232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253242:1
position: 253242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252232-253242:1:exon

AMC88_RS26365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26365
old locus tag: AMC88_PC00224
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018247171.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR substrate-binding domain-containing protein
translation: MNVMKRYVEKEVTDQLAYRRKMLQDWRGERLTGHQINLASIDLNLLVALEALLEYRNVTHAGQHIGRSQPAMSRALGRLRGMFNDDLLVRSSTGLIPTPQGEHLAQRLPSALRTIREMVTSRSVISKEWGRGATLAIPDHQALAVLPRLLPWLRERAPHLDTLACLPFDRAVRGLEQGDIDLAVGHIDVQLPGYFRRSLYTDRFACLLRHDHPALAQEWTIDNFATLRHAAISTDSPDHFGPIYDHLPNLREDRSPILFSSVLTAAVVASGTDLVLLVPRRVATQVSAMLPLRVVDPPLEPAPYKVMLIWHERCHHDPQHKWLRKEVAAALETGAD
SIO_010081: AMC88_RS26365
subclass of: SO_0000673
so part of: AMC88_RS26365
location: 252232..253242
location: region:252232-253242:1
so has part: feature:252232-253242:1:exon

WP_012489527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252232-253242:1:exon

AMC88_RS32520
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32520
old locus tag: AMC88_PC00225
pseudo: true
so part of: sequence
location: complement(<253452..254009)
location: region:253452-254009:-1
so has part: feature:253452-254009:-1:exon
subclass of: SO_0000010

45961654
type: Gene
SIO_000068: ncbigene

position:253452:-1
position: 253452
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:254009:-1
position: 254009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253452-254009:-1:exon

AMC88_RS32520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32520
old locus tag: AMC88_PC00225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053432.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: radical SAM protein
SIO_010081: AMC88_RS32520
subclass of: SO_0000673
so part of: AMC88_RS32520
location: complement(<253452..254009)
location: region:253452-254009:-1
so has part: feature:253452-254009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253452-254009:-1:exon

AMC88_RS34210
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34210
pseudo: true
so part of: sequence
location: 254786..255423
location: region:254786-255423:1
so has part: feature:254786-255423:1:exon
subclass of: SO_0000010

70363076
type: Gene
SIO_000068: ncbigene

position:254786:1
position: 254786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255423:1
position: 255423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254786-255423:1:exon

AMC88_RS34210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013897121.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nuclear transport factor 2 family protein
SIO_010081: AMC88_RS34210
subclass of: SO_0000673
so part of: AMC88_RS34210
location: 254786..255423
location: region:254786-255423:1
so has part: feature:254786-255423:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254786-255423:1:exon

AMC88_RS34215
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34215
pseudo: true
so part of: sequence
location: <255879..>256143
location: region:255879-256143:1
so has part: feature:255879-256143:1:exon
subclass of: SO_0000010

70363077
type: Gene
SIO_000068: ncbigene

position:255879:1
position: 255879
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:256143:1
position: 256143
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255879-256143:1:exon

AMC88_RS34215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014531025.1
GO function: GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: LLM class flavin-dependent oxidoreductase
SIO_010081: AMC88_RS34215
subclass of: SO_0000673
so part of: AMC88_RS34215
location: <255879..>256143
location: region:255879-256143:1
so has part: feature:255879-256143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255879-256143:1:exon

AMC88_RS26380
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26380
old locus tag: AMC88_PC00227
so part of: sequence
location: complement(256261..257148)
location: region:256261-257148:-1
so has part: feature:256261-257148:-1:exon
subclass of: SO_0000010

45960548
type: Gene
SIO_000068: ncbigene

position:256261:-1
position: 256261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257148:-1
position: 257148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256261-257148:-1:exon

AMC88_RS26380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26380
old locus tag: AMC88_PC00227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008536079.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDNSERSLRYNISEEDDRTRAMAGWIENMTGAQTLTGMPSRSTPDPHALSPSSPTRPYSLSSEPPIKVLDRSTFARKVREFYGDEIKHISVNPQEYSPFVSSKALRTATIARLYGGTDNDTPSARYFSYDLGERSVGLLRTEDGFSIENEPWRELFPGRRRITSIVDLRVTHPLVENAGDILLEHQLQLDGEQPLIMSRPATPEMGTRLEQMGFVNVGENRWVLDPTQHPDKWTKNSKGGWQRADKPWSYLSKTVEYLSDDEAGVEEHSSDASVETDSSDDDPSWYFEHLNLNRG
SIO_010081: AMC88_RS26380
subclass of: SO_0000673
so part of: AMC88_RS26380
location: complement(256261..257148)
location: region:256261-257148:-1
so has part: feature:256261-257148:-1:exon

WP_008536079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256261-257148:-1:exon

AMC88_RS32540
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32540
pseudo: true
so part of: sequence
location: 257672..>258182
location: region:257672-258182:1
so has part: feature:257672-258182:1:exon
subclass of: SO_0000010

45961655
type: Gene
SIO_000068: ncbigene

position:257672:1
position: 257672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258182:1
position: 258182
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257672-258182:1:exon

AMC88_RS32540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611470.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AMC88_RS32540
subclass of: SO_0000673
so part of: AMC88_RS32540
location: 257672..>258182
location: region:257672-258182:1
so has part: feature:257672-258182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257672-258182:1:exon

AMC88_RS26395
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: istB
locus tag: AMC88_RS26395
old locus tag: AMC88_PC00229
so part of: sequence
location: complement(258509..259243)
location: region:258509-259243:-1
so has part: feature:258509-259243:-1:exon
subclass of: SO_0000010

45960549
type: Gene
SIO_000068: ncbigene

position:258509:-1
position: 258509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259243:-1
position: 259243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258509-259243:-1:exon

AMC88_RS26395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: istB
locus tag: AMC88_RS26395
old locus tag: AMC88_PC00229
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330531.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MERTQVLELMSTLKLYGMRGAYDEVMGNGIKRQHEPPRIVGDLLQSEIAEKQARSIRYQLSIAKLPLAKDIDDFDFADTPVNEPLVRELSTGTFVADQRNVVLVGGTGTGKSHLAIAIARALIRNGTRGRFFNVVDLVNRLETETRSGKQGRTADYLNRLDFIILDELGYLPFAQAGGQLLFHLISRLYERTSIIVTTNLAFGEWPTVFGDAKMTTALLDRLTHHCEIVETGNESWRFKNRSQS
SIO_010081: AMC88_RS26395
subclass of: SO_0000673
so part of: AMC88_RS26395
location: complement(258509..259243)
location: region:258509-259243:-1
so has part: feature:258509-259243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:258509-259243:-1:exon

AMC88_RS26400
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: istA
locus tag: AMC88_RS26400
old locus tag: AMC88_PC00230
pseudo: true
so part of: sequence
location: complement(<259249..260742)
location: region:259249-260742:-1
so has part: feature:259249-260742:-1:exon
subclass of: SO_0000010

45960550
type: Gene
SIO_000068: ncbigene

position:259249:-1
position: 259249
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:260742:-1
position: 260742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259249-260742:-1:exon

AMC88_RS26400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: istA
locus tag: AMC88_RS26400
old locus tag: AMC88_PC00230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006200010.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: AMC88_RS26400
subclass of: SO_0000673
so part of: AMC88_RS26400
location: complement(<259249..260742)
location: region:259249-260742:-1
so has part: feature:259249-260742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259249-260742:-1:exon

AMC88_RS26405
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26405
old locus tag: AMC88_PC00231
so part of: sequence
location: 260803..264012
location: region:260803-264012:1
so has part: feature:260803-264012:1:exon
subclass of: SO_0000010

45960551
type: Gene
SIO_000068: ncbigene

position:260803:1
position: 260803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264012:1
position: 264012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260803-264012:1:exon

AMC88_RS26405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26405
old locus tag: AMC88_PC00231
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489536.1
GO function: GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ulp1 family isopeptidase
translation: MDADYPAKGVKFARRNTDLRLGSHDSDAGDRVPRRRSVGGSMRVTPQSLAPENSLSGARHSIDVSRAGSSSLRFGGSGSKTSSNMAEAGEVAAAPQGKRRGFTSRMASGFKKAFGLSSGKTSSRSSGQQDVDAATETHVASTKVRVGAKRGRPADRDMHPDDETRINQFAEAVRGYEILPDGSIGRGDGRVPEATVENNLGILRRFARWLRAANRDSMASRFLNDPDSLAVDIADYWASGEDDQNRLNSALSHFRRLGPEGQELQAVGAGPRLMGRRIHDPYPDDARVIDSLAKEELSKFGPVSISQKNASNQRKFSDWLKREGRGSIVSRLTGTDQQQRSLQEDFRKFTEAEGKVVVSLDRLRQYLGAESQLKQHNPYPDDALMIDGLANEELSKLGPDSTSKRKVVQNMAINQRRFSDWLQKNGRGSISSRLTGSDEQQRSLKDDFREFTTNVEVKISVGFDRLRQYLGAESQLKQHDPYPDDTRMIDGFANEELSKLGPDSTSKRKGVLNLASNQRRFSNWLRKNGRGSISSRLTGSDEQQRSLKDDFREFTTNVEVKINVSLDRLRQYLGAESQLKQHHPYPDDALMIDALANEELSKLGSASTSKRRVVWRLASNQRKFSDWLQTRGRESIASRLNGSDQQQWSLKKDYQDFTEDMGKHTISFKRLRQYQQVVEANAASGLSPEPASGREPAGLDGRSDSRAEFRSTSPLQQVDPSIEGRSGLSLDHIEWLGDQHIQTDYELLMQDLQRNDPDLAARTRLIDPLIAHYHLRLGDESTALSAFQRIVNDQNGRDTADFLFLPVSDASASDPDHRGTHWSLLLVDRRNREGPAAYHYDSFRGQNNEFAAMLAQRLGTRLEPVRMTQQRNDYDCGVFVVDGTRALVRRLARRGRPAVLHLDNLVADREQLQRRLSPAPNSARAGAAAAEPESSTQIADPAEFWHGVAQPGQLPDSWNTATFRQDLPSAAYSPVQSVNPPDAPWEQSLGASIFGTPQYTLPVDDLGGFVPPSWQHGNQPVPDDLLPAMYLFDLLPSADKPTNFSIHGVPYTATLGPSGMENDIYLFLQ
SIO_010081: AMC88_RS26405
subclass of: SO_0000673
so part of: AMC88_RS26405
location: 260803..264012
location: region:260803-264012:1
so has part: feature:260803-264012:1:exon

WP_237353182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260803-264012:1:exon

AMC88_RS26410
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26410
old locus tag: AMC88_PC00232
so part of: sequence
location: 264358..267453
location: region:264358-267453:1
so has part: feature:264358-267453:1:exon
subclass of: SO_0000010

45960552
type: Gene
SIO_000068: ncbigene

position:264358:1
position: 264358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267453:1
position: 267453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264358-267453:1:exon

AMC88_RS26410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26410
old locus tag: AMC88_PC00232
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489534.1
GO function: GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ulp1 family isopeptidase
translation: MYPRRNQPRDDDSREVSGWIEGVTGAFDTDAWIEDCYPESREMEQDPTDLRLGSHDSDAGDRVPRRSSVGGSMRVTPQSLAPERGSGQQDVDAATETHVVSTKARVGAKRGRPADRDMHPDDETRINQFAEAVRNYEILPDGSVGRGDGRVPEATVENNLGILRRFARWLRAENRDSMASRFLNDPDSLAGDIADYWANGGDDRKRLNSALSHFRRLSPEGQELQAVGPGPRLMGRRIHVPYPDDALIIDALANEERSKLRPVSTSKRNVVWNMASNQRRFSDWLQREGRESIASRLTGSDQQQQSLKDDYSNFTNAEGKKISVSFDRLRQYLGAESQLKQHDPHPDDALIIDALANEERSKLRPAATSRKNASNQRKFSAWLKREGRESIVSRLTGTDEQQRSLQEDFRAFTKEEGKKVVVSLDRLRQYLGAESQLKQHNPYPDDALMIDSFTKEELSKLGSDSSSKRKSVLNLASNKRRFSDWLRKKGRGSIASRLTGSDQQQRSLKDDLRAFTKAEGKRINVSLDRLRQYLGAESQLKQHNPYPDDALMIDSFANEELSKLGSDSTSQRIVVSKLVSNQRKFGDWLQTRGRESIASRLNGSDQQQWSLKKDYQDFTEDMGKHTISFKRLRQYQQVVEANAASGLSPEPASGREPAGLDGRSDSRAEFRSTSPLQQVDPSIEGRSGLSLDHIEWLGDQHIQTDYELLMQDLQRNDPDLAARTRLIDPLIAHYHLRLGDESTALSAFQRIVNDQNGRDTADFLFLPVSDASASDPDHRGTHWSLLLVDRRNREGPAAYHYDSFRGQNDEFAAMLAQRLGTRLEPVRMTQQRNGYDCGVFVVDGTRALVRRLARRDRPAVLHLDNLVADREQLQRRLSTATNSARAGAAAAEPESSTQIADPAEFWHGVGQPGQLPDSWNTATFRQDLPSAAYSPVQSVNPPDAPWEQSLGASIFGTPQYTLPVDDLGGFVPPSWQHGNQPVPDDLLPAMYLFDLLPSADKPQTSITIHGVPYTATLGPSGMQSDIYLFLQ
SIO_010081: AMC88_RS26410
subclass of: SO_0000673
so part of: AMC88_RS26410
location: 264358..267453
location: region:264358-267453:1
so has part: feature:264358-267453:1:exon

WP_064830112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264358-267453:1:exon

AMC88_RS26415
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26415
old locus tag: AMC88_PC00233
so part of: sequence
location: 268594..271617
location: region:268594-271617:1
so has part: feature:268594-271617:1:exon
subclass of: SO_0000010

45960553
type: Gene
SIO_000068: ncbigene

position:268594:1
position: 268594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271617:1
position: 271617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268594-271617:1:exon

AMC88_RS26415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26415
old locus tag: AMC88_PC00233
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489536.1
GO function: GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ulp1 family isopeptidase
translation: MTGAFDTDAWIEDYYSESRDMEQDPSDLRLGSHDSDAGDRVPRRRSVGGSMRVTPQSLAPERGSGQQDVDAATETHVASTKVRVGAKRGRPADRDMHPDDETRINQFAEAVRGYEILPDGSIGRGDGRVPEATVENNLGILRRFARWLRAANRDSMASRFLNDPDSLAVDIADYWASGEDDQNRLNSALSHFRRLGPEGQELQAVGAGPRLMGRRIHDPYPDDARVIDSLAKEELSKFGPVSISQKNASNQRKFSDWLKREGRGSIVSRLTGTDQQQRSLQEDFRKFTEAEGKVVVSLDRLRQYLGAESQLKQHNPYPDDALMIDGLANEELSKLGPDSTSKRKVVQNMAINQRRFSDWLQKNGRGSISSRLTGSDEQQRSLKDDFREFTTNVEVKISVGFDRLRQYLGAESQLKQHDPYPDDTRMIDGFANEELSKLGPDSTSKRKGVLNLASNQRRFSNWLRKNGRGSISSRLTGSDEQQRSLKDDFREFTTNVEVKINVSLDRLRQYLGAESQLKQHHPYPDDALMIDALANEELSKLGSASTSKRRVVWRLASNQRKFSDWLQTRGRESIASRLNGSDQQQWSLKKDYQDFTEDMGKHTISFKRLRQYQQVVEANAASGLSPEPASGREPAGLDGRSDSRAEFRSTSPLQQVDPSIEGRSGLSLDHIEWLGDQHIQTDYELLMQDLQRNDPDLAARTRLIDPLIAHYHLRLGDESTALSAFQRIVNDQNGRDTADFLFLPVSDASASDPDHRGTHWSLLLVDRRNREGPAAYHYDSFRGQNDEFAAMLAQRLGTRLEPVRMTQQRNGYDCGVFVVDGTRALVRRLARRDRPAVLHLDNLVADREQLQRRLSTATNSARAGAAAAEPESSTQIADPAEFWHGVGQPGQLPDSWNTATFRQDLPSAAYSPVQSVNPPDAPWEQSLGASIFGTPQYTLPVDDLGGFVPPSWQHGNQPVPDDLLPAMYLFDLLPSADKPTNFSIHGVPYTATLGPSGMQSDIYLFLQ
SIO_010081: AMC88_RS26415
subclass of: SO_0000673
so part of: AMC88_RS26415
location: 268594..271617
location: region:268594-271617:1
so has part: feature:268594-271617:1:exon

WP_237353183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268594-271617:1:exon

AMC88_RS26420
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26420
pseudo: true
so part of: sequence
location: complement(271847..273153)
location: region:271847-273153:-1
so has part: feature:271847-273153:-1:exon
subclass of: SO_0000010

45960554
type: Gene
SIO_000068: ncbigene

position:271847:-1
position: 271847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273153:-1
position: 273153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271847-273153:-1:exon

AMC88_RS26420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011427422.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: AMC88_RS26420
subclass of: SO_0000673
so part of: AMC88_RS26420
location: complement(271847..273153)
location: region:271847-273153:-1
so has part: feature:271847-273153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271847-273153:-1:exon

AMC88_RS26425
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26425
old locus tag: AMC88_PC00236
pseudo: true
so part of: sequence
location: 273465..274200
location: region:273465-274200:1
so has part: feature:273465-274200:1:exon
subclass of: SO_0000010

45960555
type: Gene
SIO_000068: ncbigene

position:273465:1
position: 273465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274200:1
position: 274200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273465-274200:1:exon

AMC88_RS26425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26425
old locus tag: AMC88_PC00236
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007827581.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AMC88_RS26425
subclass of: SO_0000673
so part of: AMC88_RS26425
location: 273465..274200
location: region:273465-274200:1
so has part: feature:273465-274200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273465-274200:1:exon

AMC88_RS26430
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26430
old locus tag: AMC88_PC00237
so part of: sequence
location: complement(274207..275628)
location: region:274207-275628:-1
so has part: feature:274207-275628:-1:exon
subclass of: SO_0000010

45960556
type: Gene
SIO_000068: ncbigene

position:274207:-1
position: 274207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275628:-1
position: 275628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274207-275628:-1:exon

AMC88_RS26430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26430
old locus tag: AMC88_PC00237
inference: COORDINATES: similar to AA sequence:RefSeq:WP_041684032.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ISNCY-like element ISRel10 family transposase
translation: MSFMITMSQKELHRLELIQKIRDERLSVVQAAERLDLSRSQVHRLLQAYDRDGPAGLVSKKRSRPSNRRHSEEFRNAALNVIRERYLDFGPTLAREKLIELHRISVAKETLRQWMTEAGIWVSRRERKKRVFQPRGRRDCFGELVQIDGSHHWWFENRGPKCGLLVYIDDATGKLLHLRFAGSENTFDYLHATKAYLQQWGKPLAFYSDKHGVFRSTHASEKDRTSGLTQFGRALYELNIDIICANTPQAKGRVERANQTLQDRLVKEMRLRGIDTIEEANAYAPEFIADFNARFGKQPRNPKDMHRPLADHENLDGAMCRKEVRTLSQALTLRYDKVLFILDPTDLSRSLAGKKVVVCDYPDGRLEIMHESFALPYRTFDTLRSVHRAEVVDNKRLDDMLSVVAELQAGREQQRSKGGPRRTGQTDHMFGIRDGSTGNGYQKRGRKPRTDYMNDPAVIARREKALLRQPAAE
SIO_010081: AMC88_RS26430
subclass of: SO_0000673
so part of: AMC88_RS26430
location: complement(274207..275628)
location: region:274207-275628:-1
so has part: feature:274207-275628:-1:exon

WP_064820024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:274207-275628:-1:exon

AMC88_RS26435
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26435
old locus tag: AMC88_PC00238
pseudo: true
so part of: sequence
location: complement(275802..>276044)
location: region:275802-276044:-1
so has part: feature:275802-276044:-1:exon
subclass of: SO_0000010

45960557
type: Gene
SIO_000068: ncbigene

position:275802:-1
position: 275802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276044:-1
position: 276044
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275802-276044:-1:exon

AMC88_RS26435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26435
old locus tag: AMC88_PC00238
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004674717.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AMC88_RS26435
subclass of: SO_0000673
so part of: AMC88_RS26435
location: complement(275802..>276044)
location: region:275802-276044:-1
so has part: feature:275802-276044:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275802-276044:-1:exon

AMC88_RS26440
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26440
old locus tag: AMC88_PC00239
so part of: sequence
location: 276749..277399
location: region:276749-277399:1
so has part: feature:276749-277399:1:exon
subclass of: SO_0000010

45960558
type: Gene
SIO_000068: ncbigene

position:276749:1
position: 276749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277399:1
position: 277399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276749-277399:1:exon

AMC88_RS26440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26440
old locus tag: AMC88_PC00239
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489539.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbonic anhydrase
translation: MTAGFDMTMPAFASNAPALLPDEALAKLQEGNKKFVTDTEACAANISKRRQDVAKSQAPWAIVLTCSDSRVVPELVFGGVTLGELFVARNAGNVVDTDVLGTIEYGTEHLHAPLIVVMGHKRCGAVSAACEVVSKGTKLDGSIGKMTQPILPVALAETDRGDNFVDKTVHANAFNGAERILTESAIVSRLVEEGKVKIVPAYYDLDTGVVDFLHKV
SIO_010081: AMC88_RS26440
subclass of: SO_0000673
so part of: AMC88_RS26440
location: 276749..277399
location: region:276749-277399:1
so has part: feature:276749-277399:1:exon

WP_012489539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276749-277399:1:exon

AMC88_RS34220
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: tnpB
locus tag: AMC88_RS34220
so part of: sequence
location: 278090..278716
location: region:278090-278716:1
so has part: feature:278090-278716:1:exon
subclass of: SO_0000010

70363078
type: Gene
SIO_000068: ncbigene

position:278090:1
position: 278090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278716:1
position: 278716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278090-278716:1:exon

AMC88_RS34220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: tnpB
locus tag: AMC88_RS34220
inference: COORDINATES: protein motif:HMM:NF017528.2
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MILKRGLWLRQWSPAQASQPLRIASAYIPRSYLAGVVMLVTDNDLPRKSGWSDGDWDDWHTCDDRAYHRRRRYPGRRRYRRSTPAAGDPSGAVGMIPSGVKVFLASHPIDFRKGPDSLLSLVRDAGSDPFNGALYVFRAKRADRVKIVWWDGSGVCLYAKRLEKAQFCWPRIGHHRVQLNHAQLLALVDGMDWKRVRSTPVKPPEIVG
SIO_010081: AMC88_RS34220
subclass of: SO_0000673
so part of: AMC88_RS34220
location: 278090..278716
location: region:278090-278716:1
so has part: feature:278090-278716:1:exon

WP_237353184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278090-278716:1:exon

AMC88_RS26455
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26455
old locus tag: AMC88_PC00241
so part of: sequence
location: 278791..280383
location: region:278791-280383:1
so has part: feature:278791-280383:1:exon
subclass of: SO_0000010

45960561
type: Gene
SIO_000068: ncbigene

position:278791:1
position: 278791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280383:1
position: 280383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278791-280383:1:exon

AMC88_RS26455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26455
old locus tag: AMC88_PC00241
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011654537.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66-like element ISRle3 family transposase
translation: MTRPEIELPDDVEALKAMVLAMAAKAARVEALEKQVDDLEARNADADERIERLTQILKAFDRARFGRRSERLASSTVDDEQHAFVFEEIETGIATIKAQVTKGRGSADSKRAPRPRKGFAPHLERVEVVIEPEELPEHAGKTKILIGEDVSERLDVVAAKFRVIVTRRPKYAFRNEDGVVQAAAPAHIIEGGIPTEALLAQIAVSKYADGLPLYRQEAIYARDKVELDRKLMAQWMGKLGFELNILADYILDEIKKAERIFADETTLPTLAPGSGSAKTAWLWAYARDDRTFGGSGPPMVAYRFEDSRATECVARHLSGYRGILQVDGYAAYNKLVRKDGGNDSAILAGCWSHSRRKFYELHVAKSSKVATDTVERMARLWEIEERVRGQSPEARVAARQEISAAIVRDLFTLWQATLPRVSGKSKLAEALRYAISRRDIFERFLTDGRIELDSNIVERAIRPQAITRKNSLFAGSDGGGRTWATIATLLQTAKMNAVDPQAWLTQTLERLANGWPSSEIDALMPWNYAA
SIO_010081: AMC88_RS26455
subclass of: SO_0000673
so part of: AMC88_RS26455
location: 278791..280383
location: region:278791-280383:1
so has part: feature:278791-280383:1:exon

WP_016737534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278791-280383:1:exon

AMC88_RS26460
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26460
old locus tag: AMC88_PC00242
so part of: sequence
location: complement(280514..281446)
location: region:280514-281446:-1
so has part: feature:280514-281446:-1:exon
subclass of: SO_0000010

45960562
type: Gene
SIO_000068: ncbigene

position:280514:-1
position: 280514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281446:-1
position: 281446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280514-281446:-1:exon

AMC88_RS26460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26460
old locus tag: AMC88_PC00242
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008536567.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation transporter
translation: MNFMRTEQGLLCVSIAVTILLACIGILFGIISGSFAIIFDGVYALTDAAMTVVALLVTKLIASSEAPSSKGKLIEHFTMGFWHLEPIVLALNGILITGSAVYALVNAIGSILHGGRPLNFSQAIVYSVVTLGVTATMGVIGDRANRKIKSDFVALDTKAWLMSAGLTIGLLVAFAIGYFIQGSSYEWISPFIDPVALALICIVIIPIPAGTVRRALADILLVTPLDLKQQVDAVAKTIIERHGFISHRAYVARVGRGRQIELHFVVSEDLPARKLQEWDKIRDEIGLAIGNEGPSRRLTIAFTTDPEWAD
SIO_010081: AMC88_RS26460
subclass of: SO_0000673
so part of: AMC88_RS26460
location: complement(280514..281446)
location: region:280514-281446:-1
so has part: feature:280514-281446:-1:exon

WP_012489540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280514-281446:-1:exon

AMC88_RS34225
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34225
so part of: sequence
location: complement(281668..281754)
location: region:281668-281754:-1
so has part: feature:281668-281754:-1:exon
subclass of: SO_0000010

70363079
type: Gene
SIO_000068: ncbigene

position:281668:-1
position: 281668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281754:-1
position: 281754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281668-281754:-1:exon

AMC88_RS34225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34225
inference: COORDINATES: protein motif:HMM:NF024406.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDYVHASFRVVHHVQPRFTCKAKLALV
SIO_010081: AMC88_RS34225
subclass of: SO_0000673
so part of: AMC88_RS34225
location: complement(281668..281754)
location: region:281668-281754:-1
so has part: feature:281668-281754:-1:exon

WP_237350514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281668-281754:-1:exon

AMC88_RS26470
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26470
old locus tag: AMC88_PC00244
so part of: sequence
location: complement(282486..282974)
location: region:282486-282974:-1
so has part: feature:282486-282974:-1:exon
subclass of: SO_0000010

45960564
type: Gene
SIO_000068: ncbigene

position:282486:-1
position: 282486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282974:-1
position: 282974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282486-282974:-1:exon

AMC88_RS26470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26470
old locus tag: AMC88_PC00244
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009991126.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NifX-associated nitrogen fixation protein
translation: MGTLTGSTDGPAVNEDGDLATPFLRCLIRLIRAQDAHGAWEGKSDTDLLADFILTKEQRRKIPIIGDPDPYVLWRLQNFYSCVGLVIEECTGLLASPIMTIGHEGFGRLLLTTGRLVVLSKTLRDVHRFGFETLGKLAETGTKMVDDAIEVIETYPDVARAS
SIO_010081: AMC88_RS26470
subclass of: SO_0000673
so part of: AMC88_RS26470
location: complement(282486..282974)
location: region:282486-282974:-1
so has part: feature:282486-282974:-1:exon

WP_037145513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282486-282974:-1:exon

AMC88_RS26475
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifX
locus tag: AMC88_RS26475
old locus tag: AMC88_PC00245
so part of: sequence
location: complement(282978..283472)
location: region:282978-283472:-1
so has part: feature:282978-283472:-1:exon
subclass of: SO_0000010

45960565
type: Gene
SIO_000068: ncbigene

position:282978:-1
position: 282978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283472:-1
position: 283472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282978-283472:-1:exon

AMC88_RS26475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifX
locus tag: AMC88_RS26475
old locus tag: AMC88_PC00245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737533.1
GO function: GO:0051540 - metal cluster binding [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogen fixation protein NifX
translation: MIAARRLSLVPDGVHSSAPKRKAGALRVAIATQDMKSLDAHFGSAKRFVVYDVSPDDWKLVEVLDFEDVSDQSGKHRNEDVDRINPKVKALEGCHLLFCLAIGGPSAARVVSAKIHPIKVSDPQLIEDVLSRTRAMLRTTPPPWLRKVLTEAGAIEKKPFDEED
SIO_010081: AMC88_RS26475
subclass of: SO_0000673
so part of: AMC88_RS26475
location: complement(282978..283472)
location: region:282978-283472:-1
so has part: feature:282978-283472:-1:exon

WP_008536565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282978-283472:-1:exon

AMC88_RS26480
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifN
locus tag: AMC88_RS26480
old locus tag: AMC88_PC00246
so part of: sequence
location: complement(283469..284824)
location: region:283469-284824:-1
so has part: feature:283469-284824:-1:exon
subclass of: SO_0000010

45960566
type: Gene
SIO_000068: ncbigene

position:283469:-1
position: 283469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284824:-1
position: 284824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283469-284824:-1:exon

AMC88_RS26480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifN
locus tag: AMC88_RS26480
old locus tag: AMC88_PC00246
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004672660.1
GO function: GO:0005488 - binding [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase iron-molybdenum cofactor biosynthesis protein NifN
translation: MVQVFPQTKSAAVNPLKSSQPLGAALAFLGVERAVPLFHGSQGCTSLALVLLVRHFKEAIPLQTTALDAVATILGGAGNLEEAILNLKRRAKPKLIGICTTALVETRGEDFAGDLANIKRDRADELAGTEVVLANTPDFEGAIEEGWAKAVISMVERITTPGEQSRHQKKIAILPGWHLTVADIELLRETVESFGLKPVILPDISGSLDGTVPGDRWVPTTYGGTPVDEIQELGTAAQCIAIGEHMRRPAELLRTRTGVPYALFQSLTGLKRADRFVSFLSEISGAPVPANIRRRRAQLQDALLDGHFHFGGKKIAIAVEPDQLYQFATFFTGMGAEIAAAVTTTGTSKILAEMPAESLQVGDLGDLEELAVGADLLVTHSHGRQAAERLGIPLMRVGFPIYDRLGSQHKLTSLYQGTRDLIFDVSNIFQANQRAPCPGSLDPSRKGELPR
SIO_010081: AMC88_RS26480
subclass of: SO_0000673
so part of: AMC88_RS26480
location: complement(283469..284824)
location: region:283469-284824:-1
so has part: feature:283469-284824:-1:exon

WP_012489543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283469-284824:-1:exon

AMC88_RS26485
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifE
locus tag: AMC88_RS26485
old locus tag: AMC88_PC00247
so part of: sequence
location: complement(284834..286324)
location: region:284834-286324:-1
so has part: feature:284834-286324:-1:exon
subclass of: SO_0000010

45960567
type: Gene
SIO_000068: ncbigene

position:284834:-1
position: 284834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286324:-1
position: 286324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284834-286324:-1:exon

AMC88_RS26485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifE
locus tag: AMC88_RS26485
old locus tag: AMC88_PC00247
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053415.1
GO function: GO:0005488 - binding [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
translation: MPLLNAKVQDVFDEPACEKNRSKDSKARKNGCSKPLIPGAAAGGCAFDGAKIVLQPITDVAHLIHGPLGCEGNSWDNRGSASSGPTLWRTSFTTDLTETEVVMGHGERKLFKAIREIKEAYAPPAIFVYSTCVTALIGDDIEAVCKRAAEKFGLPVVPVNAPGFAGSKNLGNKLAGEALLDHVIGSVEPNDVTAYDINIIGEFNLSGEFWLVKPLLDRLGIRVRACIPGDARYLDIASAHRAKASMLVCSTALINLARKMEELWDIPFFEGSFYGITDTSEALRQIAKLLVMQGADPEILERTEALIAEEEAIAWMKLAAYRPRLEGKRVLLNTGGVKSWSVVHALMEVGIEIVGTSVKKSTPEDKERIKQLLKDEKHLFESMAPRELYNMLADGKADIMLSGGRTQFIALKAKTPWLDINQERHHPYAGYDGMVELVRQIDLAIHNPIWMEVREPAPWECQHAVEEELTNTKSENETGYVLQNFVGAVAGSFGKR
SIO_010081: AMC88_RS26485
subclass of: SO_0000673
so part of: AMC88_RS26485
location: complement(284834..286324)
location: region:284834-286324:-1
so has part: feature:284834-286324:-1:exon

WP_012489544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284834-286324:-1:exon

AMC88_RS26490
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifK
locus tag: AMC88_RS26490
old locus tag: AMC88_PC00248
so part of: sequence
location: complement(286383..287924)
location: region:286383-287924:-1
so has part: feature:286383-287924:-1:exon
subclass of: SO_0000010

45960568
type: Gene
SIO_000068: ncbigene

position:286383:-1
position: 286383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287924:-1
position: 287924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286383-287924:-1:exon

AMC88_RS26490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifK
locus tag: AMC88_RS26490
old locus tag: AMC88_PC00248
EC number: 1.18.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006331758.1
GO component: GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase molybdenum-iron protein subunit beta
translation: MPQSAEKVLDHAPLFREPEYRQMLAEKKANFECPHPDQVVADQNDFTKTWEYREKNLGREALVVNPAKACQPLGAVFAAAGFEQTMSFVHGSQGCVAYYRSHLSRHFKEPSSAVSSSMTEDAAVFGGLKNMVDGLANTYKLYDPKMIAVSTTCMAEVIGDDLHGFIENAKNEGSVPHDFDVPFAHTPAFVGSHVDGYDGMIKGILENFWKGNERKEVAQAINIIPGFDGFCVGNNRELKRLLDMMGVSYIFIQDASDQFDTPSDGTYRMYDGGTKIEDLKTALNAEATLSLQHYNTRKTLEYCKEVGQVTASFHYPLGVQATDEFLMKVSEITGKEIPPTIGLERGRLVDAMADSQAWLHGKKYAIYGDPDFVYAVARFVLETGGEPTHCLATNGTSAWEAEMKALLASSPFGKDAQVWAGKDLWALRSLLFTEPVDLMIGNSYGKYLERDTGTPLIRLTFPIFDRHHHHRFPLMGYQGGLRVLTTILDKIFDKLDRETSEPGVTDYSYDLTR
SIO_010081: AMC88_RS26490
subclass of: SO_0000673
so part of: AMC88_RS26490
location: complement(286383..287924)
location: region:286383-287924:-1
so has part: feature:286383-287924:-1:exon

WP_018247184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286383-287924:-1:exon

AMC88_RS26495
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifD
locus tag: AMC88_RS26495
old locus tag: AMC88_PC00249
so part of: sequence
location: complement(288048..289550)
location: region:288048-289550:-1
so has part: feature:288048-289550:-1:exon
subclass of: SO_0000010

45960569
type: Gene
SIO_000068: ncbigene

position:288048:-1
position: 288048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289550:-1
position: 289550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288048-289550:-1:exon

AMC88_RS26495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifD
locus tag: AMC88_RS26495
old locus tag: AMC88_PC00249
EC number: 1.18.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003532774.1
GO component: GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase molybdenum-iron protein alpha chain
translation: MSLDYENDSVLHEKLIAEVLAQYPDKAAKRRKKHLSVATSRDEPGDEPKALSECDVKSNIKSIPGVMTIRGCAYAGSKGVVWGPVKDMVHISHGPVGCGHYSWSQRRNYYVGLTGIDTFVTLQFTSDFQEKDIVFGGDKKLEQVIDEIEELFPLNNGISVQSECPIGLIGDDIEAVSRKKAKEHEKTIVPVRCEGFRGVSQSLGHHIANDAIRDWVFDKNEVEFETGPYDVNVVGDYNIGGDAWATRILLEEVGLRVVGNWSGDATLAEVERAPKAKLNLIHCYRSMNYICRHMEEKYGIPWMEYNFFGPSQIETSLREIAKHFGPEIVDKTEAVITKYRPLVDAVVDKYRPRLEGKTVMLYVGGLRPRHVITAYEDLGMRIVGTGYEFAHNDDYQRTGHYVNKGTLIYDDVTGYELEKFIEGIRPDLVGSGIKEKYPVQKMGIPFRQMHSWDYSGPYHGYDGFAIFARDMDLAINNPVWDLYDVPWKKEAAPAEAVAAE
SIO_010081: AMC88_RS26495
subclass of: SO_0000673
so part of: AMC88_RS26495
location: complement(288048..289550)
location: region:288048-289550:-1
so has part: feature:288048-289550:-1:exon

WP_064820025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288048-289550:-1:exon

AMC88_RS26500
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifH
locus tag: AMC88_RS26500
old locus tag: AMC88_PC00250
so part of: sequence
location: complement(289658..290551)
location: region:289658-290551:-1
so has part: feature:289658-290551:-1:exon
subclass of: SO_0000010

45960570
type: Gene
SIO_000068: ncbigene

position:289658:-1
position: 289658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290551:-1
position: 290551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289658-290551:-1:exon

AMC88_RS26500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifH
locus tag: AMC88_RS26500
old locus tag: AMC88_PC00250
EC number: 1.18.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004675840.1
GO component: GO:0016611 - iron-iron nitrogenase complex [Evidence IEA]; GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]; GO:0016613 - vanadium-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase iron protein
translation: MVDLRQIAFYGKGGIGKSTTSQNTLAALVDLGQKILIVGCDPKADSTRLILNAKAQDTVLHLAAQEGSVEDLELEDVLKAGYKGIKCVESGGPEPGVGCAGRGVITSINFLEENGAYDDVDYVSYDVLGDVVCGGFAMPIRENKAQEIYIVMSGEMMALYAANNIAKGILKYAHSGGVRLGGLICNERQTDRELDLSEALAARLNSKLIHFVPRDNIVQHAELRKMTVIQYAPDSKQAGEYRALAEKIHANSGQGTIPTPITMEELEDMLLDFGIMKSDEQMLAELQAKESAVVAAQ
SIO_010081: AMC88_RS26500
subclass of: SO_0000673
so part of: AMC88_RS26500
location: complement(289658..290551)
location: region:289658-290551:-1
so has part: feature:289658-290551:-1:exon

WP_040111861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289658-290551:-1:exon

AMC88_RS33790
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33790
old locus tag: AMC88_PC00251
so part of: sequence
location: 290616..291044
location: region:290616-291044:1
so has part: feature:290616-291044:1:exon
subclass of: SO_0000010

45961814
type: Gene
SIO_000068: ncbigene

position:290616:1
position: 290616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291044:1
position: 291044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290616-291044:1:exon

AMC88_RS33790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33790
old locus tag: AMC88_PC00251
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIFKTRAMWADRAEGKIFLVGFQKVTPNHHRKLPNKPNVADQTKPTDGVVMASLAPLGRPRLSAGQRIRKLETIAPSSQSKNVEAFDPDLPLTAIRASAVLNRSQTLDHRMLEFSGFIQGGGLVAPPEFTNEIGALLPIAP
SIO_010081: AMC88_RS33790
subclass of: SO_0000673
so part of: AMC88_RS33790
location: 290616..291044
location: region:290616-291044:1
so has part: feature:290616-291044:1:exon

WP_064820026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290616-291044:1:exon

AMC88_RS32555
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32555
pseudo: true
so part of: sequence
location: complement(290972..>291184)
location: region:290972-291184:-1
so has part: feature:290972-291184:-1:exon
subclass of: SO_0000010

45961658
type: Gene
SIO_000068: ncbigene

position:290972:-1
position: 290972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291184:-1
position: 291184
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290972-291184:-1:exon

AMC88_RS32555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611444.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AMC88_RS32555
subclass of: SO_0000673
so part of: AMC88_RS32555
location: complement(290972..>291184)
location: region:290972-291184:-1
so has part: feature:290972-291184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290972-291184:-1:exon

AMC88_RS26510
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26510
old locus tag: AMC88_PC00252
pseudo: true
so part of: sequence
location: complement(<291186..291428)
location: region:291186-291428:-1
so has part: feature:291186-291428:-1:exon
subclass of: SO_0000010

45960571
type: Gene
SIO_000068: ncbigene

position:291186:-1
position: 291186
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:291428:-1
position: 291428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291186-291428:-1:exon

AMC88_RS26510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26510
old locus tag: AMC88_PC00252
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636855.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nuclear transport factor 2 family protein
SIO_010081: AMC88_RS26510
subclass of: SO_0000673
so part of: AMC88_RS26510
location: complement(<291186..291428)
location: region:291186-291428:-1
so has part: feature:291186-291428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291186-291428:-1:exon

AMC88_RS26515
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26515
old locus tag: AMC88_PC00253
so part of: sequence
location: complement(291633..291875)
location: region:291633-291875:-1
so has part: feature:291633-291875:-1:exon
subclass of: SO_0000010

45960572
type: Gene
SIO_000068: ncbigene

position:291633:-1
position: 291633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291875:-1
position: 291875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291633-291875:-1:exon

AMC88_RS26515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26515
old locus tag: AMC88_PC00253
inference: COORDINATES: protein motif:HMM:NF018595.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin
translation: MRVIVHTSKCQGHARCWAQAPEIFNLDDEGYILPGAIDVEERDELFASRGARSCPERALEIDCVSDALLDRLLFNQHCGG
SIO_010081: AMC88_RS26515
subclass of: SO_0000673
so part of: AMC88_RS26515
location: complement(291633..291875)
location: region:291633-291875:-1
so has part: feature:291633-291875:-1:exon

WP_026188841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291633-291875:-1:exon

AMC88_RS26520
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26520
old locus tag: AMC88_PC00254
so part of: sequence
location: complement(291908..293086)
location: region:291908-293086:-1
so has part: feature:291908-293086:-1:exon
subclass of: SO_0000010

45960573
type: Gene
SIO_000068: ncbigene

position:291908:-1
position: 291908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293086:-1
position: 293086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291908-293086:-1:exon

AMC88_RS26520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26520
old locus tag: AMC88_PC00254
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008536557.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome P450
translation: MVKDFSLFTSPGMERMPNGDPHAAVACLHNGPRIFYSPCNTRDGRGTWVIVRAQDQRKLLQDTGTFSSHRSLFASALGENWPLIPLELDPPAHSVFRSLLNPLLSPRRIMELEPAVRDRAIALISKISASSTSCDILTDFAFPFAVSIFLRLLGLSDERLNTFVGWGKDLLHGDGIRRTAAARTILAFIDELAAMRRKEPADDFMTFVVQAKVDGRLLRDQEIHGIGVLLFVAGLDTVATAIGFDLAYLARNPTEQELLRSKPDRIVLAAEELLRAYSTVQMIRVATKDINFEGAPIRKGDYISCATMIANRDPVEFENPNTIDLAREDNRHTAFAYGPHRCLGSHLARREIVIGLEEWLSRIPDFRIKDGTAPITYGGHVFGMENLILDWS
SIO_010081: AMC88_RS26520
subclass of: SO_0000673
so part of: AMC88_RS26520
location: complement(291908..293086)
location: region:291908-293086:-1
so has part: feature:291908-293086:-1:exon

WP_010009913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291908-293086:-1:exon

AMC88_RS33795
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33795
old locus tag: AMC88_PC00255
so part of: sequence
location: 293393..293566
location: region:293393-293566:1
so has part: feature:293393-293566:1:exon
subclass of: SO_0000010

45961815
type: Gene
SIO_000068: ncbigene

position:293393:1
position: 293393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293566:1
position: 293566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293393-293566:1:exon

AMC88_RS33795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33795
old locus tag: AMC88_PC00255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHFDFLRSMAVTKETGRQSLPPRKKNFKVHANLIDLAGKKFFNCLSALWLKAELKIG
SIO_010081: AMC88_RS33795
subclass of: SO_0000673
so part of: AMC88_RS33795
location: 293393..293566
location: region:293393-293566:1
so has part: feature:293393-293566:1:exon

WP_010009909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293393-293566:1:exon

AMC88_RS26525
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26525
old locus tag: AMC88_PC00256
so part of: sequence
location: 294163..294879
location: region:294163-294879:1
so has part: feature:294163-294879:1:exon
subclass of: SO_0000010

45960574
type: Gene
SIO_000068: ncbigene

position:294163:1
position: 294163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294879:1
position: 294879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294163-294879:1:exon

AMC88_RS26525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26525
old locus tag: AMC88_PC00256
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010009905.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MDVARSEVLVIGTSVACRSCQARHGVVCGALSAGQLSELGRHSLRRKVDAGCEIIAQGSENSFYSNITRGVVKLCKVMSDGRQQIVGLQFAPDFVGRPFVRESTLSAEAATDAEICVFPRNLLERMILETRELQRSLHAQALNELDAAREWMLTLGRRTAEEKVASLLHLIAAHAETATSTAFDLPLSRAEIADFLGLTIETVSRQLTRLRKEGVIRIENIRHITVPDMDALAKKISG
SIO_010081: AMC88_RS26525
subclass of: SO_0000673
so part of: AMC88_RS26525
location: 294163..294879
location: region:294163-294879:1
so has part: feature:294163-294879:1:exon

WP_010009905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294163-294879:1:exon

AMC88_RS33375
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33375
pseudo: true
so part of: sequence
location: complement(294869..>294958)
location: region:294869-294958:-1
so has part: feature:294869-294958:-1:exon
subclass of: SO_0000010

45961740
type: Gene
SIO_000068: ncbigene

position:294869:-1
position: 294869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294958:-1
position: 294958
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294869-294958:-1:exon

AMC88_RS33375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017964666.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: L,D-transpeptidase
SIO_010081: AMC88_RS33375
subclass of: SO_0000673
so part of: AMC88_RS33375
location: complement(294869..>294958)
location: region:294869-294958:-1
so has part: feature:294869-294958:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294869-294958:-1:exon

AMC88_RS34230
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34230
pseudo: true
so part of: sequence
location: complement(<295016..>295234)
location: region:295016-295234:-1
so has part: feature:295016-295234:-1:exon
subclass of: SO_0000010

70363080
type: Gene
SIO_000068: ncbigene

position:295016:-1
position: 295016
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:295234:-1
position: 295234
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295016-295234:-1:exon

AMC88_RS34230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007629624.1
note: responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cobyrinic acid a,c-diamide synthase
SIO_010081: AMC88_RS34230
subclass of: SO_0000673
so part of: AMC88_RS34230
location: complement(<295016..>295234)
location: region:295016-295234:-1
so has part: feature:295016-295234:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295016-295234:-1:exon

AMC88_RS26530
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26530
old locus tag: AMC88_PC00257
so part of: sequence
location: 295762..296301
location: region:295762-296301:1
so has part: feature:295762-296301:1:exon
subclass of: SO_0000010

45960575
type: Gene
SIO_000068: ncbigene

position:295762:1
position: 295762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296301:1
position: 296301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295762-296301:1:exon

AMC88_RS26530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26530
old locus tag: AMC88_PC00257
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004678566.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxiredoxin
translation: MTMEKQVPIVTFRTRVRDESISGPNPYRWEDKTTDDYFSGKRVILFSLPGAFTPICSTFQLPDFESLYVEFKKNGIDDIYCLSVNDAFVMNAWGKSQGLKNVKLIPDGSGEFTRKMGMLVAKDNLGFGLRSWRYAAVINNGVVEGWFEEEGFGDNCATDPYGVSSPQNILKCLKAPAFV
SIO_010081: AMC88_RS26530
subclass of: SO_0000673
so part of: AMC88_RS26530
location: 295762..296301
location: region:295762-296301:1
so has part: feature:295762-296301:1:exon

WP_004678566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295762-296301:1:exon

AMC88_RS26535
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: rpoN
locus tag: AMC88_RS26535
old locus tag: AMC88_PC00258
so part of: sequence
location: 296377..297828
location: region:296377-297828:1
so has part: feature:296377-297828:1:exon
subclass of: SO_0000010

45960576
type: Gene
SIO_000068: ncbigene

position:296377:1
position: 296377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297828:1
position: 297828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296377-297828:1:exon

AMC88_RS26535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: rpoN
locus tag: AMC88_RS26535
old locus tag: AMC88_PC00258
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004678547.1
GO function: GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase factor sigma-54
translation: MKSFTSLHQRQQQSLVITPQLIASIRLLQLAHTELNQFVEQEIEKNPFLDLASNDGGASGVSPTAADDPNISAREDHVDGPARTDMPELSSPWKSIRDTGNLSPGERPSLDEFAASTETLHEHVAHQIALTAFTPQERLIAGALADHLDDTGYLQVNLLELAERLNSPEAGVKRVLEALQLFDPPGIFARSLGECLEIQLRQRDRFDPAMAALVANLELLARRDFRALKRRCRVDEDDLLDMLNEIRALDPKPGNQFQSARSESIIPDVFVLPSPGGGWHVELNREILPKVLINQTYFAQVTRLTAQSSKDQSFLNECFQSASWLVRSLDQRATTILKVATEIVRHQDVFLEDGIAHLRPLNLKTIADAIDMHESTVSRVTSNKYILTPRGVFELKYFFTVAIPSSQGGDAHSAEAVRHQIRALIAAETLHDVLSDDGIVAKLKETGVDIARRTVAKYREAMNIPSSAQRRREKRFVLAAAEG
SIO_010081: AMC88_RS26535
subclass of: SO_0000673
so part of: AMC88_RS26535
location: 296377..297828
location: region:296377-297828:1
so has part: feature:296377-297828:1:exon

WP_011053429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296377-297828:1:exon

AMC88_RS26540
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26540
old locus tag: AMC88_PC00259
so part of: sequence
location: 298358..298675
location: region:298358-298675:1
so has part: feature:298358-298675:1:exon
subclass of: SO_0000010

45960577
type: Gene
SIO_000068: ncbigene

position:298358:1
position: 298358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298675:1
position: 298675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298358-298675:1:exon

AMC88_RS26540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26540
old locus tag: AMC88_PC00259
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004678546.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-sulfur cluster assembly accessory protein
translation: MIKLTENAAAIMNVTLSRAEQAEGFRIAVEAGGCAGYKYLVGLESVQGQGDAVIETNGVKVFVDADSQAHINGMTIDFVTGPETSGFVFDNPNAHQNCTCGKSFG
SIO_010081: AMC88_RS26540
subclass of: SO_0000673
so part of: AMC88_RS26540
location: 298358..298675
location: region:298358-298675:1
so has part: feature:298358-298675:1:exon

WP_009995752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298358-298675:1:exon

AMC88_RS26545
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifS
locus tag: AMC88_RS26545
old locus tag: AMC88_PC00261
so part of: sequence
location: 299645..300841
location: region:299645-300841:1
so has part: feature:299645-300841:1:exon
subclass of: SO_0000010

45960578
type: Gene
SIO_000068: ncbigene

position:299645:1
position: 299645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300841:1
position: 300841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299645-300841:1:exon

AMC88_RS26545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifS
locus tag: AMC88_RS26545
old locus tag: AMC88_PC00261
EC number: 2.8.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636873.1
GO function: GO:0031071 - cysteine desulfurase activity [Evidence IEA]
GO process: GO:0006520 - amino acid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine desulfurase NifS
translation: MRAIYLDNNATTRVDPEVVEAMLPFFADQFGNPSSTHAFGSSIREAVRKARRQLQALIGAEFDHEIVFTSGGTESDNAAILSALEVMPERTEIVTSAVEHSAVLTLCGHLEKTRGIKVHRIPVDRHGRLDLDAYETALTHRVAIASIMWANNETGTIFPVAKLAEMAKRIGALFHTDAVQAVGKVPMDLQPTAIDMLSLSGHKFHGPKGIGALYLRRGLSFSSLIKGGHQERDRRAGTENTAGIVGLGKAAELALKSIDDESTRLKSLRDRLENGIVQRVPGAFVTGDRLKRLPNTANIAFQRVEGDSMLLLLNRYGIACSSGSACSSGSLEPSHVLRAMDIPHAMAHGTIRFSFSRDNCDEDVDRVLEVLPGIVERLRSQCRSGHVADTSSRVRSGE
SIO_010081: AMC88_RS26545
subclass of: SO_0000673
so part of: AMC88_RS26545
location: 299645..300841
location: region:299645-300841:1
so has part: feature:299645-300841:1:exon

WP_012489549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299645-300841:1:exon

AMC88_RS26550
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifW
locus tag: AMC88_RS26550
old locus tag: AMC88_PC00262
so part of: sequence
location: 301181..301564
location: region:301181-301564:1
so has part: feature:301181-301564:1:exon
subclass of: SO_0000010

45960579
type: Gene
SIO_000068: ncbigene

position:301181:1
position: 301181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301564:1
position: 301564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301181-301564:1:exon

AMC88_RS26550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifW
locus tag: AMC88_RS26550
old locus tag: AMC88_PC00262
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008536550.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase stabilizing/protective protein NifW
translation: MCRCSADSSPVDVKDILNRLKSLSAAEEFFAALGVPYDPKVLDVSRLHIMKRMGQYLAAEDFSHLPDRVIAARARAILERAYCDFATSAPLSHRVFKVLKDHNPNRPVTPGRTVVPLDSFLKPFEKK
SIO_010081: AMC88_RS26550
subclass of: SO_0000673
so part of: AMC88_RS26550
location: 301181..301564
location: region:301181-301564:1
so has part: feature:301181-301564:1:exon

WP_008536550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301181-301564:1:exon

AMC88_RS26555
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26555
old locus tag: AMC88_PC00263
so part of: sequence
location: 301741..302589
location: region:301741-302589:1
so has part: feature:301741-302589:1:exon
subclass of: SO_0000010

45960580
type: Gene
SIO_000068: ncbigene

position:301741:1
position: 301741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302589:1
position: 302589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301741-302589:1:exon

AMC88_RS26555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26555
old locus tag: AMC88_PC00263
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004678528.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: electron transfer flavoprotein subunit beta/FixA family protein
translation: MHIVICIKQVPDSAQIRVHPVTNTIMRQGVPTIINPYDLFALEEALQLRDRHGGEVTVLTMGPPMAEDALRKALTYGADRAVLLTDRHFAGSDTLATSFALSRAIAKIGEAFGTPDIVFTGKQTIDGDTAQVGPGIAKRLDLLQLTYVAKIVSVDINGREITVERRSEGGTQTLMSKLPCLITMLEGTNEIRRGSLDDALRAARSQIVKWNAADAGIEDLTKCGLRGSPTVVKRVFAPPERAEKAEQIDTAEKTPRDLAEELIAGIFLRQPALESELAFDGE
SIO_010081: AMC88_RS26555
subclass of: SO_0000673
so part of: AMC88_RS26555
location: 301741..302589
location: region:301741-302589:1
so has part: feature:301741-302589:1:exon

WP_004678528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301741-302589:1:exon

AMC88_RS26560
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26560
old locus tag: AMC88_PC00264
so part of: sequence
location: 302605..303714
location: region:302605-303714:1
so has part: feature:302605-303714:1:exon
subclass of: SO_0000010

45960581
type: Gene
SIO_000068: ncbigene

position:302605:1
position: 302605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303714:1
position: 303714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302605-303714:1:exon

AMC88_RS26560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26560
old locus tag: AMC88_PC00264
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008536549.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: electron transfer flavoprotein subunit alpha/FixB family protein
translation: MLSTNRESPPPAAGRAAMKKELPDQFKDHRHVWVFMELERDQVHPVSFELLGEGRKLADKLGVQLAGVVLGPPGEATWFAIAEAFAYGADLAYLVEAPLLADYRNEPFTKALTDLVTNYKPEILLLGATTLGRDLAGSVATTLLTGLTADCTELDVDADGSLAATRPTFGGSLLCTIYTLNCRPQMATVRPRVMAMPPRGNNKIGRVIQHKVSMIEEEIVTKVLGFLSDGQSATANLAYADVVVAGGLGLGAVENVKLMKKLARTIGADYGCSRPLVQKGWMPADRQIGQTGKTIRPKLYIAAGISGAIQHRVGVEGADLILAINTDPNAPIFDFAHLGVVTDAIRLLPSLTELFTHRLSPHSRDKLAN
SIO_010081: AMC88_RS26560
subclass of: SO_0000673
so part of: AMC88_RS26560
location: 302605..303714
location: region:302605-303714:1
so has part: feature:302605-303714:1:exon

WP_008536549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302605-303714:1:exon

AMC88_RS26565
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26565
old locus tag: AMC88_PC00265
so part of: sequence
location: 303724..305031
location: region:303724-305031:1
so has part: feature:303724-305031:1:exon
subclass of: SO_0000010

45960582
type: Gene
SIO_000068: ncbigene

position:303724:1
position: 303724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305031:1
position: 305031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303724-305031:1:exon

AMC88_RS26565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26565
old locus tag: AMC88_PC00265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008536548.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-binding protein
translation: MTEENFDAIVIGAGMAGNAAAYTMSNRGMKVLQLERGEYPGSKNVQGAIMYADMLEKILPDFRDDAPLERHLVEQRFWMMDDSSHIGMQYRSDDFNESRHNRYTVIRAQFDKWFSRKVREAGATLLCETTVTELVRDPKGKVIGVRTDRAGDVILADVVVLAEGVNGLLGTRAGLRDTPKPETVALAVKEMHFLAEEVIDQRFGLQANEGCVIEAVGTISRNMAGLAFLYTNKESISIGIGCLVSEFAATMESPYDLLEKFKSHPSVKPLIAGAEVKEYAAHLIPEGGYKAIPQLFGDGWVVVGDAAQLNNAVHREGSNLAMTSGRIAGEAIVQIKNRKKPMVKENLSLYKSMLEKSFVIKDLRKYKDMPALLHTNSRNFFTTYPRLLSQAAQNFVRVDGTPKIDKERATTGTFIKARSRWGLFGDAVRLARAWR
SIO_010081: AMC88_RS26565
subclass of: SO_0000673
so part of: AMC88_RS26565
location: 303724..305031
location: region:303724-305031:1
so has part: feature:303724-305031:1:exon

WP_008536548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303724-305031:1:exon

AMC88_RS26570
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26570
old locus tag: AMC88_PC00266
so part of: sequence
location: 305044..305343
location: region:305044-305343:1
so has part: feature:305044-305343:1:exon
subclass of: SO_0000010

45960583
type: Gene
SIO_000068: ncbigene

position:305044:1
position: 305044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305343:1
position: 305343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305044-305343:1:exon

AMC88_RS26570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26570
old locus tag: AMC88_PC00266
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011970923.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin family protein
translation: MTVAVTNIRVEDKLYQNRYVVDAGRPHIRVRPHDWPSVNLYALTSVCPAKCYELNDQGQVEVIADGCMECGTCRVLCEASGDIEWNYPRGGFGVLFKFG
SIO_010081: AMC88_RS26570
subclass of: SO_0000673
so part of: AMC88_RS26570
location: 305044..305343
location: region:305044-305343:1
so has part: feature:305044-305343:1:exon

WP_004678523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305044-305343:1:exon

AMC88_RS26575
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifA
locus tag: AMC88_RS26575
old locus tag: AMC88_PC00267
so part of: sequence
location: 305564..307252
location: region:305564-307252:1
so has part: feature:305564-307252:1:exon
subclass of: SO_0000010

45960584
type: Gene
SIO_000068: ncbigene

position:305564:1
position: 305564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307252:1
position: 307252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305564-307252:1:exon

AMC88_RS26575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifA
locus tag: AMC88_RS26575
old locus tag: AMC88_PC00267
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018247198.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nif-specific transcriptional activator NifA
translation: MRQAGTQRSGIYEISKVLTAPARLEITLANVVNVLSSFLQIRCGAIVVLDAEGQPEIAATGDIPPSSQSAARGVIPKAVIDHIATTGMPLIVKDVSKSELFQAEPQPPWSSGTVPISFIGVPVKADNKILGTISIDRVRNDAAPFPADEDVRFLTMVANLVSRTIRLHRFLNLEGRRPIGEQERPEKPIIAQRGAPGRHPPVKIDGIIGDSPALQQVVETVSVVARTNSTVLLRGESGTGKEFFAQAIHELSPRKNKPFVKLNCAALPEGVLESELFGHEKGAFTGAIAQRAGRFELANGGTLLLDEIGEISPAFQAKLLRVLQEGELERVGGTKTLAVDVRLICATNKNLEMAVANAEFRADLYYRISVVPIVLPPLRERPGDIPRLANALLDRFNKENQRELTFSSSAIEVMSQCYFPGNVRELENCVRRTATLARSSSIVSSDFACKNSQCLSSLLWKTDGSPGGITVDGHARSNVMPTSSPRSGGSIGASDEVSSVKACDPHGSGCPAMESRLTQRDRLIEAMEKAGWVQAKAARILGLTPRQVGYALRQHRIEVKKL
SIO_010081: AMC88_RS26575
subclass of: SO_0000673
so part of: AMC88_RS26575
location: 305564..307252
location: region:305564-307252:1
so has part: feature:305564-307252:1:exon

WP_011053431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305564-307252:1:exon

AMC88_RS26580
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifB
locus tag: AMC88_RS26580
old locus tag: AMC88_PC00268
so part of: sequence
location: 307466..308944
location: region:307466-308944:1
so has part: feature:307466-308944:1:exon
subclass of: SO_0000010

45960585
type: Gene
SIO_000068: ncbigene

position:307466:1
position: 307466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308944:1
position: 308944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307466-308944:1:exon

AMC88_RS26580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifB
locus tag: AMC88_RS26580
old locus tag: AMC88_PC00268
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053432.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase cofactor biosynthesis protein NifB
translation: MSAPMISLESATSTTSLYQLLATAKPSGCTSSSCGVSTKPADVDQAIWAKIKNHPCYSEEAHHYFARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPDQALRKVIAVANEVPQLSVLGVAGPGDACYDWKKTKETFERVAGEIHDIKLCISTNGLALPDHVAELVDMNVDHVTITINMVDPEIGAKIYPWIFYRNRRYTGIEAARILHERQMVGLEMLTACGIITKVNSVMIPGVNDEHLVEVNKWVKERGAFLHNVMPLISDPAHGTYYGLTGQRGPRALELKALQDRLEGGAKLMRHCRQCRADAVGLLGDDRGQEFALDQLPGEITYDARKREAYREVIARERGDHATAKSEAIETVKAAGDGSLHVAVATKGGGRINEHFGHAKEFQVYEASSRGITYVGHRKIEQYCLGGRGEEATLDGIITALVGIDVVLCAKIGECPKTKLMEAGVRATDAYCYDYIETAIGTLYAAKFGVEPQAATA
SIO_010081: AMC88_RS26580
subclass of: SO_0000673
so part of: AMC88_RS26580
location: 307466..308944
location: region:307466-308944:1
so has part: feature:307466-308944:1:exon

WP_012489550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307466-308944:1:exon

AMC88_RS26585
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26585
old locus tag: AMC88_PC00269
so part of: sequence
location: 308979..309185
location: region:308979-309185:1
so has part: feature:308979-309185:1:exon
subclass of: SO_0000010

45960586
type: Gene
SIO_000068: ncbigene

position:308979:1
position: 308979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309185:1
position: 309185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308979-309185:1:exon

AMC88_RS26585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26585
old locus tag: AMC88_PC00269
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008536545.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S binding protein
translation: MAFRIIASQCTQCGACEFECPSGAIRFKGEIYVIDPEKCTECKGTFETQQCAEVCPVPKTCVLAAPAI
SIO_010081: AMC88_RS26585
subclass of: SO_0000673
so part of: AMC88_RS26585
location: 308979..309185
location: region:308979-309185:1
so has part: feature:308979-309185:1:exon

WP_012489551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308979-309185:1:exon

AMC88_RS26590
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26590
old locus tag: AMC88_PC00270
so part of: sequence
location: 309250..309567
location: region:309250-309567:1
so has part: feature:309250-309567:1:exon
subclass of: SO_0000010

45960587
type: Gene
SIO_000068: ncbigene

position:309250:1
position: 309250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309567:1
position: 309567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309250-309567:1:exon

AMC88_RS26590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26590
old locus tag: AMC88_PC00270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008536544.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogen fixation protein NifZ
translation: MGLGREQEVEIHRPPRFTPGERVRARLHVKNDGTYAGKKIGESLVRKGDEGYVRDIGTFLQQFYIYAVEWVERGTIVGMRARELTSLDNAAACGAAEIAGPPTKE
SIO_010081: AMC88_RS26590
subclass of: SO_0000673
so part of: AMC88_RS26590
location: 309250..309567
location: region:309250-309567:1
so has part: feature:309250-309567:1:exon

WP_012489552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309250-309567:1:exon

AMC88_RS26595
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifT
locus tag: AMC88_RS26595
old locus tag: AMC88_PC00271
so part of: sequence
location: 309572..309784
location: region:309572-309784:1
so has part: feature:309572-309784:1:exon
subclass of: SO_0000010

45960588
type: Gene
SIO_000068: ncbigene

position:309572:1
position: 309572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309784:1
position: 309784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309572-309784:1:exon

AMC88_RS26595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifT
locus tag: AMC88_RS26595
old locus tag: AMC88_PC00271
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636888.1
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative nitrogen fixation protein NifT
translation: MKIMIRRTSAGLSAYVPKKDLEEPIVDVEADDMWGGTITLRNGWRLVLPKLSRDTPLPITVHARKIPDED
SIO_010081: AMC88_RS26595
subclass of: SO_0000673
so part of: AMC88_RS26595
location: 309572..309784
location: region:309572-309784:1
so has part: feature:309572-309784:1:exon

WP_004678514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309572-309784:1:exon

AMC88_RS26600
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26600
old locus tag: AMC88_PC00272
so part of: sequence
location: 309815..310753
location: region:309815-310753:1
so has part: feature:309815-310753:1:exon
subclass of: SO_0000010

45960589
type: Gene
SIO_000068: ncbigene

position:309815:1
position: 309815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310753:1
position: 310753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309815-310753:1:exon

AMC88_RS26600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26600
old locus tag: AMC88_PC00272
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004678511.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIR2 family protein
translation: MNKILTSDRLLIIRNGDAEERLRLLQEALAADRIVPYLGPDLLRLQSTEPPVPDTPEAVSAALNERTPAPSRIRSNMWSVAQFIEQRRHRRTLQAWMAEIFGAPVAPTALHDWLATLPLSLIVDGWYDGTMRAAFAKTGRTDVVEIQGVTRANGGGDIWTKTYDLSGRDVECVAAPKTVLYAPYGSVIPASNFLVSDSDYVEVLTEIDIQTPIPGMVKERRIDRGFLFIGCRFNDQMLRIYARQIIKRSHGPHFAVLDAEGLTKNERRFLAASGITVVDLPIGEAAALLVPFGSKADGDHGRTAPASNLCSG
SIO_010081: AMC88_RS26600
subclass of: SO_0000673
so part of: AMC88_RS26600
location: 309815..310753
location: region:309815-310753:1
so has part: feature:309815-310753:1:exon

WP_012489553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309815-310753:1:exon

AMC88_RS26605
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: hisC
locus tag: AMC88_RS26605
old locus tag: AMC88_PC00273
so part of: sequence
location: complement(311198..312301)
location: region:311198-312301:-1
so has part: feature:311198-312301:-1:exon
subclass of: SO_0000010

45960590
type: Gene
SIO_000068: ncbigene

position:311198:-1
position: 311198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312301:-1
position: 312301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311198-312301:-1:exon

AMC88_RS26605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: hisC
locus tag: AMC88_RS26605
old locus tag: AMC88_PC00273
EC number: 2.6.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004671991.1
GO function: GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidinol-phosphate transaminase
translation: MADAKLQAVLSALSPMARQLNALPSNQPGRDANCVKLNTNENPFPLPMMVLQSALAALERHYLYPEDDNLSLRDAAASAYGLSQDQVVAGNGSSELLGLIYRAFLDPGDSVAMISPGFSFNRKLAKLQGARFLEIEWGESYSLPIEQLLLGPAKDAKFILLANPNNPTGTFVPVAEIDRLVAQSDQLIVVDEAYVDFAPDDALRLVDRHPNLLVLRTLSKGFAAAGIRVGFGFGHPELIGRLRNLQNVFNMNVIGHAVGISILSHRADYDENHRYIKHERHRTTTALSQLGFSVIPSHTNFLLARVPPGRDGKWWQASLDRQNILVAVFPDAGLENFIRVSIGTRTQMDAFLSAARDIISGSMKTQS
SIO_010081: AMC88_RS26605
subclass of: SO_0000673
so part of: AMC88_RS26605
location: complement(311198..312301)
location: region:311198-312301:-1
so has part: feature:311198-312301:-1:exon

WP_008536542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311198-312301:-1:exon

AMC88_RS34565
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34565
so part of: sequence
location: complement(312460..312798)
location: region:312460-312798:-1
so has part: feature:312460-312798:-1:exon
subclass of: SO_0000010

77169032
type: Gene
SIO_000068: ncbigene

position:312460:-1
position: 312460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312798:-1
position: 312798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312460-312798:-1:exon

AMC88_RS34565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34565
EC number: 2.7.1.25
inference: COORDINATES: protein motif:HMM:NF013730.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylyl-sulfate kinase
translation: MATWLQSTRSRREHPPRCRGRRADGGGELIEILVDTPLEECARRDPKGLYRKALAGKIANFTGVSSPYEIPEGAELHLETVGHDPAALAFEIEQFLERRMEQVTHECESGEA
SIO_010081: AMC88_RS34565
subclass of: SO_0000673
so part of: AMC88_RS34565
location: complement(312460..312798)
location: region:312460-312798:-1
so has part: feature:312460-312798:-1:exon

WP_269465933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312460-312798:-1:exon

AMC88_RS34570
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34570
old locus tag: AMC88_PC00274
so part of: sequence
location: complement(312728..312946)
location: region:312728-312946:-1
so has part: feature:312728-312946:-1:exon
subclass of: SO_0000010

77169033
type: Gene
SIO_000068: ncbigene

position:312728:-1
position: 312728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312946:-1
position: 312946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312728-312946:-1:exon

AMC88_RS34570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34570
old locus tag: AMC88_PC00274
EC number: 2.7.1.25
inference: COORDINATES: protein motif:HMM:NF013730.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylyl-sulfate kinase
translation: MKSQQPAVLLFTGLSGSGKSTIANALDRLLHAHGKHTYILDGDNVRHGLNRDLASINPIASRTSAALPRSPS
SIO_010081: AMC88_RS34570
subclass of: SO_0000673
so part of: AMC88_RS34570
location: complement(312728..312946)
location: region:312728-312946:-1
so has part: feature:312728-312946:-1:exon

WP_029532461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312728-312946:-1:exon

AMC88_RS34235
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34235
pseudo: true
so part of: sequence
location: complement(<313005..313142)
location: region:313005-313142:-1
so has part: feature:313005-313142:-1:exon
subclass of: SO_0000010

70363081
type: Gene
SIO_000068: ncbigene

position:313005:-1
position: 313005
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:313142:-1
position: 313142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313005-313142:-1:exon

AMC88_RS34235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004125955.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: adenylyl-sulfate kinase
SIO_010081: AMC88_RS34235
subclass of: SO_0000673
so part of: AMC88_RS34235
location: complement(<313005..313142)
location: region:313005-313142:-1
so has part: feature:313005-313142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313005-313142:-1:exon

AMC88_RS32575
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32575
old locus tag: AMC88_PC00276
so part of: sequence
location: complement(313619..314125)
location: region:313619-314125:-1
so has part: feature:313619-314125:-1:exon
subclass of: SO_0000010

45961660
type: Gene
SIO_000068: ncbigene

position:313619:-1
position: 313619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314125:-1
position: 314125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313619-314125:-1:exon

AMC88_RS32575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32575
old locus tag: AMC88_PC00276
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004671987.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MKQWINELGLQQVDDPGIDKPVYRKPFDGRIALSAELENLISISLREARDKRKLPRSKLAPLLGITKQVYGRYENGVSRLTVSRLIHLCEVLDATPEEIIAPAAPYLWGETETKAVLLLATIVKLRTFDEEILQDIFSLLSRIDETGSDSGDRAMKVASTSATADDRE
SIO_010081: AMC88_RS32575
subclass of: SO_0000673
so part of: AMC88_RS32575
location: complement(313619..314125)
location: region:313619-314125:-1
so has part: feature:313619-314125:-1:exon

WP_004671987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313619-314125:-1:exon

AMC88_RS26620
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26620
old locus tag: AMC88_PC00277
pseudo: true
so part of: sequence
location: 314568..315511
location: region:314568-315511:1
so has part: feature:314568-315511:1:exon
subclass of: SO_0000010

45960591
type: Gene
SIO_000068: ncbigene

position:314568:1
position: 314568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315511:1
position: 315511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314568-315511:1:exon

AMC88_RS26620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26620
old locus tag: AMC88_PC00277
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007635327.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS481 family transposase
SIO_010081: AMC88_RS26620
subclass of: SO_0000673
so part of: AMC88_RS26620
location: 314568..315511
location: region:314568-315511:1
so has part: feature:314568-315511:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314568-315511:1:exon

AMC88_RS26625
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26625
old locus tag: AMC88_PC00278
so part of: sequence
location: complement(316029..316532)
location: region:316029-316532:-1
so has part: feature:316029-316532:-1:exon
subclass of: SO_0000010

45960592
type: Gene
SIO_000068: ncbigene

position:316029:-1
position: 316029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316532:-1
position: 316532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316029-316532:-1:exon

AMC88_RS26625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26625
old locus tag: AMC88_PC00278
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018247203.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MTEDLASYRSSRGLVSTADPEVDKAIYRKPGFGGEITSLGHMEELISAFLKKTREAQGLSRADVAPMLGLSIPVYGRYERAFSKMTVTRMIHLCEILGFMPIDMIFEAAPHLWGRTSEEAEDCLTLARILRRLPNGTTRDLIRLLQRMIPDDDESDRGISDVAEPVK
SIO_010081: AMC88_RS26625
subclass of: SO_0000673
so part of: AMC88_RS26625
location: complement(316029..316532)
location: region:316029-316532:-1
so has part: feature:316029-316532:-1:exon

WP_010069248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316029-316532:-1:exon

AMC88_RS33930
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33930
so part of: sequence
location: 318076..318267
location: region:318076-318267:1
so has part: feature:318076-318267:1:exon
subclass of: SO_0000010

63509608
type: Gene
SIO_000068: ncbigene

position:318076:1
position: 318076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318267:1
position: 318267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318076-318267:1:exon

AMC88_RS33930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33930
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRRIFGFRRPQAFIQEDHHGNLGGITAAKGMAALHLSRKVNVQYKSIHPAKAAALMISARLP
SIO_010081: AMC88_RS33930
subclass of: SO_0000673
so part of: AMC88_RS33930
location: 318076..318267
location: region:318076-318267:1
so has part: feature:318076-318267:1:exon

WP_170965075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318076-318267:1:exon

AMC88_RS26635
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26635
old locus tag: AMC88_PC00279
pseudo: true
so part of: sequence
location: complement(318242..318542)
location: region:318242-318542:-1
so has part: feature:318242-318542:-1:exon
subclass of: SO_0000010

45960594
type: Gene
SIO_000068: ncbigene

position:318242:-1
position: 318242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318542:-1
position: 318542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318242-318542:-1:exon

AMC88_RS26635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26635
old locus tag: AMC88_PC00279
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636760.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AMC88_RS26635
subclass of: SO_0000673
so part of: AMC88_RS26635
location: complement(318242..318542)
location: region:318242-318542:-1
so has part: feature:318242-318542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318242-318542:-1:exon

AMC88_RS32585
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32585
old locus tag: AMC88_PC00280
pseudo: true
so part of: sequence
location: complement(318542..>318769)
location: region:318542-318769:-1
so has part: feature:318542-318769:-1:exon
subclass of: SO_0000010

45961661
type: Gene
SIO_000068: ncbigene

position:318769:-1
position: 318769
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318542-318769:-1:exon

AMC88_RS32585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32585
old locus tag: AMC88_PC00280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009803580.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase domain-containing protein
SIO_010081: AMC88_RS32585
subclass of: SO_0000673
so part of: AMC88_RS32585
location: complement(318542..>318769)
location: region:318542-318769:-1
so has part: feature:318542-318769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318542-318769:-1:exon

AMC88_RS32590
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32590
so part of: sequence
location: 318745..319152
location: region:318745-319152:1
so has part: feature:318745-319152:1:exon
subclass of: SO_0000010

45961662
type: Gene
SIO_000068: ncbigene

position:318745:1
position: 318745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319152:1
position: 319152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318745-319152:1:exon

AMC88_RS32590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053436.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPFFREQCPVHSAHVGDEVEVHYCWHPYFGQKVSIRRVEERATGRFLKVLGPTGVVIAISGWMIDPVVCRGMTMGTPRVDLATLIELNRLVSGGSKAAPFRSGRRITQEDHDEISQYAGAGVGPAARPDIRGAQR
SIO_010081: AMC88_RS32590
subclass of: SO_0000673
so part of: AMC88_RS32590
location: 318745..319152
location: region:318745-319152:1
so has part: feature:318745-319152:1:exon

WP_012489556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318745-319152:1:exon

AMC88_RS34240
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34240
pseudo: true
so part of: sequence
location: 319149..>320018
location: region:319149-320018:1
so has part: feature:319149-320018:1:exon
subclass of: SO_0000010

70363082
type: Gene
SIO_000068: ncbigene

position:319149:1
position: 319149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320018:1
position: 320018
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319149-320018:1:exon

AMC88_RS34240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34240
inference: COORDINATES: protein motif:HMM:NF012464.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: AMC88_RS34240
subclass of: SO_0000673
so part of: AMC88_RS34240
location: 319149..>320018
location: region:319149-320018:1
so has part: feature:319149-320018:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319149-320018:1:exon

AMC88_RS32600
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32600
so part of: sequence
location: complement(320967..322657)
location: region:320967-322657:-1
so has part: feature:320967-322657:-1:exon
subclass of: SO_0000010

45961664
type: Gene
SIO_000068: ncbigene

position:320967:-1
position: 320967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322657:-1
position: 322657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320967-322657:-1:exon

AMC88_RS32600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020819796.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MDDAASEIARLRAALAASEARAASAEADLAQVRAVVTTSEAMIRHLKLEIAKIRREQYGQSSERRARLIEQMELQLEELEADATEDEIAAERVATRITNVSAFERRRPARKPFPEHLPRERLVIDAPSTCTCCGSHRIVKMGEDITETLEIIPRQWKVIQTVREKFTCRDCEKISQPPAPFHATPRGWAGPHLLATILFEKFGQHQPLNRQAERYAREGVALSLSTLADQVGACTTALQPIHDLIRAHVLAAERLHGDDTTVPLLARGATKQARLWTYVRDDRPFAGGAPPAALFHFSPDREKTHPNTHLAGWHGTLQADAYGGYNDLYRADRRPALVISALCWSHARRKFFELADIAGNVRKGKPAHEISPVALEAVARIDALFDIERGINGMPAEDRLAARLQHARPLVEELHDWLMAQRGQMSKHNPVAEPINYMFEKEGRWEAFARFLDDGRLCLTNNAAERALRGVAVPESLCTPSLSICKHWKRLGVSNATRAALSGYRGLDGCRSQIAGPDLIRRAGNHLLGRQHVRLDQVAYSVVGHAQNRRRLCHGQPFALFIG
SIO_010081: AMC88_RS32600
subclass of: SO_0000673
so part of: AMC88_RS32600
location: complement(join(320967..322105,322105..322657))
location: region:320967-322657:-1
so has part: feature:322105-322657:-1:exon
so has part: feature:320967-322105:-1:exon

WP_237353185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322105-322657:-1:exon

position:322105:-1
position: 322105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320967-322105:-1:exon

AMC88_RS26655
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: tnpB
locus tag: AMC88_RS26655
old locus tag: AMC88_PC00283
so part of: sequence
location: complement(322717..323067)
location: region:322717-323067:-1
so has part: feature:322717-323067:-1:exon
subclass of: SO_0000010

45960595
type: Gene
SIO_000068: ncbigene

position:322717:-1
position: 322717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323067:-1
position: 323067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322717-323067:-1:exon

AMC88_RS26655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: tnpB
locus tag: AMC88_RS26655
old locus tag: AMC88_PC00283
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012976042.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIAFPAGVKVWIAGGVTDMRCGMNSLALKVQQGLGRDPHGGEVFCFRGRKGDLIKVLWHDGVGMSLYLKRLEAGKFIWPVSQNGSAVPVSSAQLGYLLEGIDWRNPRWTQRPSKAG
SIO_010081: AMC88_RS26655
subclass of: SO_0000673
so part of: AMC88_RS26655
location: complement(322717..323067)
location: region:322717-323067:-1
so has part: feature:322717-323067:-1:exon

WP_016737501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322717-323067:-1:exon

AMC88_RS34245
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34245
pseudo: true
so part of: sequence
location: complement(<323286..323492)
location: region:323286-323492:-1
so has part: feature:323286-323492:-1:exon
subclass of: SO_0000010

70363083
type: Gene
SIO_000068: ncbigene

position:323286:-1
position: 323286
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:323492:-1
position: 323492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323286-323492:-1:exon

AMC88_RS34245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611357.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AMC88_RS34245
subclass of: SO_0000673
so part of: AMC88_RS34245
location: complement(<323286..323492)
location: region:323286-323492:-1
so has part: feature:323286-323492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323286-323492:-1:exon

AMC88_RS26665
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26665
old locus tag: AMC88_PC00284
so part of: sequence
location: 323443..323733
location: region:323443-323733:1
so has part: feature:323443-323733:1:exon
subclass of: SO_0000010

45960596
type: Gene
SIO_000068: ncbigene

position:323443:1
position: 323443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323733:1
position: 323733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323443-323733:1:exon

AMC88_RS26665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26665
old locus tag: AMC88_PC00284
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGEMIVAHDIRHGLKANQQVRTDGLRRMGTYKTAYFLLQKLREAADLRRDAIKLHGTVQIDGKYVGGVLRKVTRRKSARTGARRKIRTASVCEFWR
SIO_010081: AMC88_RS26665
subclass of: SO_0000673
so part of: AMC88_RS26665
location: 323443..323733
location: region:323443-323733:1
so has part: feature:323443-323733:1:exon

WP_008536527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323443-323733:1:exon

AMC88_RS33380
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33380
so part of: sequence
location: 323766..323882
location: region:323766-323882:1
so has part: feature:323766-323882:1:exon
subclass of: SO_0000010

45961741
type: Gene
SIO_000068: ncbigene

position:323766:1
position: 323766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323882:1
position: 323882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323766-323882:1:exon

AMC88_RS33380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33380
inference: COORDINATES: protein motif:HMM:NF024172.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTRVILDENGKDAWAAVAKHVEPKALLIADEHKAQPGL
SIO_010081: AMC88_RS33380
subclass of: SO_0000673
so part of: AMC88_RS33380
location: 323766..323882
location: region:323766-323882:1
so has part: feature:323766-323882:1:exon

WP_008536526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323766-323882:1:exon

AMC88_RS34250
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34250
pseudo: true
so part of: sequence
location: complement(<324486..>324695)
location: region:324486-324695:-1
so has part: feature:324486-324695:-1:exon
subclass of: SO_0000010

70363084
type: Gene
SIO_000068: ncbigene

position:324486:-1
position: 324486
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:324695:-1
position: 324695
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324486-324695:-1:exon

AMC88_RS34250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011084489.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: AMC88_RS34250
subclass of: SO_0000673
so part of: AMC88_RS34250
location: complement(<324486..>324695)
location: region:324486-324695:-1
so has part: feature:324486-324695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324486-324695:-1:exon

AMC88_RS26675
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26675
old locus tag: AMC88_PC00285
so part of: sequence
location: 324947..325876
location: region:324947-325876:1
so has part: feature:324947-325876:1:exon
subclass of: SO_0000010

45960597
type: Gene
SIO_000068: ncbigene

position:324947:1
position: 324947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325876:1
position: 325876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324947-325876:1:exon

AMC88_RS26675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26675
old locus tag: AMC88_PC00285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636915.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyprenyl synthetase family protein
translation: MISNHQADVVGDSDKLIEQALRAAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKDPELATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYLSLQAALTPELGARMIEVVAEAVGPSHGLIAGQSMEAMTHVPIDRYHHYKTGSLFVAAATCGALASGADPAPWSKVGELLGHAYQIADDIADTVGRAEVLGKLPAVDTQLNRPSIVRGQGLDSAAARFYAYLEQIGDTIPASPQKRSFVDWLNHALCKGVAGPGKAGLIQQTALDCAPL
SIO_010081: AMC88_RS26675
subclass of: SO_0000673
so part of: AMC88_RS26675
location: 324947..325876
location: region:324947-325876:1
so has part: feature:324947-325876:1:exon

WP_008536525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324947-325876:1:exon

AMC88_RS26680
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: fni
locus tag: AMC88_RS26680
old locus tag: AMC88_PC00286
so part of: sequence
location: complement(326065..327231)
location: region:326065-327231:-1
so has part: feature:326065-327231:-1:exon
subclass of: SO_0000010

45960598
type: Gene
SIO_000068: ncbigene

position:326065:-1
position: 326065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327231:-1
position: 327231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326065-327231:-1:exon

AMC88_RS26680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: fni
locus tag: AMC88_RS26680
old locus tag: AMC88_PC00286
EC number: 5.3.3.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018247206.1
GO function: GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
GO process: GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type 2 isopentenyl-diphosphate Delta-isomerase
translation: MRRRERAGGGGVRAAPSVRSDATPTPNTADRASGCDDALTRRKDDHLDLVLDRRTAPATVAAGWEQIRFEHCALPELDLTQIELRTSLLGKPIRAPLLISSMTGGMPRAKAINRHLSEAAQALGIAMCVGSQRVSLQSRNSQGLTRALRRLAPDIPLLANIGAAQLREADGLDLARRAVDALEADGLIVHLNPLQEVLQPDGDRDWHGVLAQVARAARSVGVPIVAKEVGWGLSASVACALVEAGVEVIDVAGAGGTSWAAVEGERARDAAGRAVAMAFADWGIPTPASLQAVRRALPTVKLIASGGIRDGVDVAKAIRLGADIAGQAAGVLPAATVSTEAVVAHFEVVIRQLAVACFCTGSPDLATLRQARLLPSAHLLPSAHPPVG
SIO_010081: AMC88_RS26680
subclass of: SO_0000673
so part of: AMC88_RS26680
location: complement(326065..327231)
location: region:326065-327231:-1
so has part: feature:326065-327231:-1:exon

WP_016737499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326065-327231:-1:exon

AMC88_RS26685
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26685
old locus tag: AMC88_PC00287
so part of: sequence
location: complement(327218..328120)
location: region:327218-328120:-1
so has part: feature:327218-328120:-1:exon
subclass of: SO_0000010

45960599
type: Gene
SIO_000068: ncbigene

position:327218:-1
position: 327218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328120:-1
position: 328120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327218-328120:-1:exon

AMC88_RS26685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26685
old locus tag: AMC88_PC00287
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011084944.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIPTESALQQVLEWGRSLTGFADEHAVEAVRGGQYILQCIQPSLHDISARTGRDPQDEKLIVAFYRELALLFWLDDCNDLGLIAPEQLAAVEQALGQGVPCAVPGFEGCAVLRASLAALAYDRRDYTELLNDTRCYCAALRAGPAQAAGAERWSYAEYLHNSIDSIAYANVFCCLSLLWGLDMATLRARPAFRQVLRLISTIGRLQNDLHGCAKDRAAGEADNAAILLLQRYPAMPVEDFLNDELVGHARMLHRVMVKERFPAPWGPLIEAMAVIRAKYYQTSISRYGNDAAGGGQRAPA
SIO_010081: AMC88_RS26685
subclass of: SO_0000673
so part of: AMC88_RS26685
location: complement(327218..328120)
location: region:327218-328120:-1
so has part: feature:327218-328120:-1:exon

WP_008536520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327218-328120:-1:exon

AMC88_RS26690
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26690
old locus tag: AMC88_PC00288
so part of: sequence
location: complement(328117..329670)
location: region:328117-329670:-1
so has part: feature:328117-329670:-1:exon
subclass of: SO_0000010

45960600
type: Gene
SIO_000068: ncbigene

position:328117:-1
position: 328117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329670:-1
position: 329670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328117-329670:-1:exon

AMC88_RS26690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26690
old locus tag: AMC88_PC00288
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737498.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSALSEQILSELRHLLNETRDGGSVSPSVYDTARVLQFSGNVTGRQNGYAWLMAQQQADGGWGSADFPLFRHVPTWAALLALRRADPLPGAADAVQAATRFLERQPDPYADAVPEDAPVGAELILPQISGEATSLVGDVVFPRYPALLPLRQACLVKLGTVGPLPSGHPLLHSWEAWGTSPTTACLDDDGSIGISPAATAAWRAHALTQASAPQVERADRYLQAASRAARSGIEGVVPSVWPINVFEPCWSLYTLHLAGLFSHPALAEAVRVIVAQLDACLGVRGLGPALHFAADADDTAVALCILHLAGRNPAANALRHFEIGGLFVTFPGERNASVSTNIHALHAFRLLGKPTAGTSAYLEANRNADGLWDNDKWHVSWLYPTAHAIAALAQGAPQWRDERALAALLQAQRDDGGWGAGRASTFEETAYALFALHVMDGREEPTGRARIALAVARALEWMLARHEAHELPQTPLWIGKELYCPTRVVRVIELAGLWLALRWGRRIPTEGAGGMAQ
SIO_010081: AMC88_RS26690
subclass of: SO_0000673
so part of: AMC88_RS26690
location: complement(328117..329670)
location: region:328117-329670:-1
so has part: feature:328117-329670:-1:exon

WP_012489559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328117-329670:-1:exon

AMC88_RS26700
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26700
old locus tag: AMC88_PC00289
so part of: sequence
location: complement(330444..331787)
location: region:330444-331787:-1
so has part: feature:330444-331787:-1:exon
subclass of: SO_0000010

45960602
type: Gene
SIO_000068: ncbigene

position:330444:-1
position: 330444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331787:-1
position: 331787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330444-331787:-1:exon

AMC88_RS26700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26700
old locus tag: AMC88_PC00289
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008838317.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome P450
translation: MDMLLNPLNRWRRLRDDIPVMPGAFPLVGHLPAIVCDLPRLLRRAERTLGSHFWLDFGPAGHLMTCLDPDALALLRHKEVSSALIEEIAPDILGGTLVTLDGSAHRQARDGIKAAFLPRGLTEAGIGELFEPIIRAQVKAWRDRGEVAILPDTRNLMLKLTFSLMGIPAQDLSEWHRKYRQLLQLMVAPPIDLPGMPLRRGRAARDWIDAQSRQFIRDARARAARTGLINDMVSAFDCSDGALSDDVLVANIRLLLLAGHETSASTIAWMVIELAQHPELWDALVEEAQRVGAVPTGHEDLAQCPVAEALFRETLRMHPASSLVPRRAMQELQLGQRRIPSGTHLCIPLLHFSTSPLLHEAPDQFRLGRWLQRTEPIRPVDMLQFGAGPHVCMGYHLVWLELVQFSIALALTMQEAGVRPRLMSGVEKGRRYYPTAHPSMTVRIGFS
SIO_010081: AMC88_RS26700
subclass of: SO_0000673
so part of: AMC88_RS26700
location: complement(330444..331787)
location: region:330444-331787:-1
so has part: feature:330444-331787:-1:exon

WP_029875527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330444-331787:-1:exon

AMC88_RS26705
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26705
old locus tag: AMC88_PC00290
so part of: sequence
location: complement(331787..332629)
location: region:331787-332629:-1
so has part: feature:331787-332629:-1:exon
subclass of: SO_0000010

45960603
type: Gene
SIO_000068: ncbigene

position:332629:-1
position: 332629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331787-332629:-1:exon

AMC88_RS26705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26705
old locus tag: AMC88_PC00290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053443.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MERFKGKVAVVTGAGAGIGKACALAIAREGGRVVVADIDGPAAIACTAQIAAEAGQALAVAMDIADAQAVAELFKTAKRRFGGVDVLVNNASAMHLTPHDRAILDLDVAVWDQTMATNLRGTLLCCRQAIPQMIGRGGGAIVNMSSCQGLSGDTALTSYAASKAAMNMLSASLATQYGHAKIRCNAVAPGLVMTERLFAKLDECMQRHLHRHQLLPHVGRPEDVAALVAFLLSEEAAFITGQVVCIDGGMLAHVPTYADGGNSAARPAGDAAEAAAASHW
SIO_010081: AMC88_RS26705
subclass of: SO_0000673
so part of: AMC88_RS26705
location: complement(331787..332629)
location: region:331787-332629:-1
so has part: feature:331787-332629:-1:exon

WP_008536513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331787-332629:-1:exon

AMC88_RS26710
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26710
old locus tag: AMC88_PC00291
so part of: sequence
location: complement(332616..334217)
location: region:332616-334217:-1
so has part: feature:332616-334217:-1:exon
subclass of: SO_0000010

45960604
type: Gene
SIO_000068: ncbigene

position:332616:-1
position: 332616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334217:-1
position: 334217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332616-334217:-1:exon

AMC88_RS26710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26710
old locus tag: AMC88_PC00291
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004673819.1
GO function: GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome P450
translation: MDVQDTTAACHDAFAELASPACIQDPYPFMRWLREHDPVHRAASGLFLLSRHADIYWAFKATGDAFRGPAPSELARYFPRAASSLSLNLLASTLAMKEPPTHTRLRRLISRDFTVGQIDNLRPSIARIVAARLDGMAPALERGEAVDLHREFALALPMLVFAELFGMPQDDVFELSAIVSAILEGLSPHASDPQLAAADVASARVKAYFGDLILRKRADPRRDIVSTLVGAHTDDADTLSDAELISMLWGMLLGGFATTAATIDHAVLAMLAYPEERHWLQGDAAGVEAFVEEVLRCEAPAMFSSIPRIAQRDIELHGVVIPKDADVRVLIAAGNRDPDAFADPDRFDPVRFYGTRPGMSSDGKIMLSFGHGIHFCLGAQLARVQLAESLPQIQARFPTLALAEQPTREPSAFLRTFRALPVRLHAQAAAEVRAVVDQDLCGTTGQCVLTLPGTFRQREPDGVAEVCMATVPQALHAAVRLAASQCPVAAIRVIESEAGDDHCTNPGPTPSPADAERHAAKDLRNPGEHDGTI
SIO_010081: AMC88_RS26710
subclass of: SO_0000673
so part of: AMC88_RS26710
location: complement(332616..334217)
location: region:332616-334217:-1
so has part: feature:332616-334217:-1:exon

WP_064820029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332616-334217:-1:exon

AMC88_RS26715
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26715
old locus tag: AMC88_PC00292
so part of: sequence
location: complement(334223..335503)
location: region:334223-335503:-1
so has part: feature:334223-335503:-1:exon
subclass of: SO_0000010

45960605
type: Gene
SIO_000068: ncbigene

position:334223:-1
position: 334223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335503:-1
position: 335503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334223-335503:-1:exon

AMC88_RS26715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26715
old locus tag: AMC88_PC00292
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489562.1
GO function: GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome P450
translation: MSEQSLPTLPMWRVDHIEPSPEMLALRAKGPIHRVRLPSGHECWWVTGYDEAKAVLSDAAFLPAGMPPADFTPDSVILGSPGWLVSHEGDEHARLRTIVAPAFSNSRVKLLTQQVEAITVQLFDTLAVQPQPADLRRHLSFPLPAKVISALMGVPFEEHAFFAGLSDEVMTHQHESGPRSASGLAWEELRAYIHGKIRGKRQDPGDNLLTDLLAAVDQGKATEEEAIGLAAGVLVAGHESTVAQIEFGLLAMFRHPQQRERLVRDPSLVDKAVEEILRMYSPGAGWDGIMRYPRTDVTIAGVHIPAESKVLVGLPATSFDPCHFKDPEVFDIGRDANPHLAFSYGQHNCIGAALARLELKAIFGSIFQRFPALRLAVAPEELKLRKEIITGGFEEMPVLWCGRPPASQSSHLAAPGAHRSDQPLDR
SIO_010081: AMC88_RS26715
subclass of: SO_0000673
so part of: AMC88_RS26715
location: complement(334223..335503)
location: region:334223-335503:-1
so has part: feature:334223-335503:-1:exon

WP_011053445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334223-335503:-1:exon

AMC88_RS26720
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26720
old locus tag: AMC88_PC00293
pseudo: true
so part of: sequence
location: complement(335572..>335748)
location: region:335572-335748:-1
so has part: feature:335572-335748:-1:exon
subclass of: SO_0000010

45960606
type: Gene
SIO_000068: ncbigene

position:335572:-1
position: 335572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335748:-1
position: 335748
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335572-335748:-1:exon

AMC88_RS26720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26720
old locus tag: AMC88_PC00293
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014501321.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: cytochrome
SIO_010081: AMC88_RS26720
subclass of: SO_0000673
so part of: AMC88_RS26720
location: complement(335572..>335748)
location: region:335572-335748:-1
so has part: feature:335572-335748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335572-335748:-1:exon

AMC88_RS26730
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26730
pseudo: true
so part of: sequence
location: 336976..338165
location: region:336976-338165:1
so has part: feature:336976-338165:1:exon
subclass of: SO_0000010

45960607
type: Gene
SIO_000068: ncbigene

position:336976:1
position: 336976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338165:1
position: 338165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336976-338165:1:exon

AMC88_RS26730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611472.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: AMC88_RS26730
subclass of: SO_0000673
so part of: AMC88_RS26730
location: 336976..338165
location: region:336976-338165:1
so has part: feature:336976-338165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:336976-338165:1:exon

AMC88_RS26740
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26740
old locus tag: AMC88_PC00297
so part of: sequence
location: 339430..340026
location: region:339430-340026:1
so has part: feature:339430-340026:1:exon
subclass of: SO_0000010

45960609
type: Gene
SIO_000068: ncbigene

position:339430:1
position: 339430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340026:1
position: 340026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339430-340026:1:exon

AMC88_RS26740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26740
old locus tag: AMC88_PC00297
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489566.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRTELAQDHLHSTLKSAYCRALSLSQVDARVAFAPVKSSWARALFKNLEGKDMENFVYLLEPESAIFRAAELPDRNSIASIAGLIGSDLIQMIRFDDMHSLFVGEEALRVGLTAFTIFDGYPIPLAGQIALLGGDGSKPYRSPSITMTEAARRFECCRPVLDPVFVPMDRVANKGLIVAGALEGLQVRIDRRSPVLL
SIO_010081: AMC88_RS26740
subclass of: SO_0000673
so part of: AMC88_RS26740
location: 339430..340026
location: region:339430-340026:1
so has part: feature:339430-340026:1:exon

WP_011053448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339430-340026:1:exon

AMC88_RS26750
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26750
old locus tag: AMC88_PC00299
so part of: sequence
location: 340544..341254
location: region:340544-341254:1
so has part: feature:340544-341254:1:exon
subclass of: SO_0000010

45960610
type: Gene
SIO_000068: ncbigene

position:340544:1
position: 340544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341254:1
position: 341254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340544-341254:1:exon

AMC88_RS26750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26750
old locus tag: AMC88_PC00299
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010009888.1
GO function: GO:0030151 - molybdenum ion binding [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogen fixation protein NifQ
translation: MPNVHHIGVSTVAVPAADAARQTGIAVDHCDDCQTRYFSRPCQMGLKLYFDDYVLFRVFSRALEEIEMGIATATEATGLSLRELRDIPARSFPARLIRAFALQEASDCVPDAEEQLLRDMLLGHVRPGDPEGVRFAKIIARRSMREDHLWRDLGLLDKAELRRLLFAHFPALVAGNTNNMRWKKYFYRKICEAEGFSLCSAPSCKECGDFNECFLPEESGSLSGAAEFVGREILKT
SIO_010081: AMC88_RS26750
subclass of: SO_0000673
so part of: AMC88_RS26750
location: 340544..341254
location: region:340544-341254:1
so has part: feature:340544-341254:1:exon

WP_008536495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340544-341254:1:exon

AMC88_RS26755
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifH
locus tag: AMC88_RS26755
old locus tag: AMC88_PC00300
so part of: sequence
location: 342141..343034
location: region:342141-343034:1
so has part: feature:342141-343034:1:exon
subclass of: SO_0000010

45960611
type: Gene
SIO_000068: ncbigene

position:342141:1
position: 342141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343034:1
position: 343034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342141-343034:1:exon

AMC88_RS26755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifH
locus tag: AMC88_RS26755
old locus tag: AMC88_PC00300
EC number: 1.18.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004675840.1
GO component: GO:0016611 - iron-iron nitrogenase complex [Evidence IEA]; GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]; GO:0016613 - vanadium-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase iron protein
translation: MSDLRQIAFYGKGGIGKSTTSQNTLAALVDLGQKILIVGCDPKADSTRLILNAKAQDTVLHLAAQEGSVEDLELEDVLKAGYKGIKCVESGGPEPGVGCAGRGVITSINFLEENGAYDDVDYVSYDVLGDVVCGGFAMPIRENKAQEIYIVMSGEMMALYAANNIAKGILKYAHSGGVRLGGLICNERQTDRELDLSEALAARLNSKLIHFVPRDNIVQHAELRKMTVIQYAPDSKQAGEYRALAEKIHANSGQGTIPTPITMEELEDMLLDFGIMKSDEQMLAELQAKESAVVAAQ
SIO_010081: AMC88_RS26755
subclass of: SO_0000673
so part of: AMC88_RS26755
location: 342141..343034
location: region:342141-343034:1
so has part: feature:342141-343034:1:exon

WP_004675840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342141-343034:1:exon

AMC88_RS26760
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26760
old locus tag: AMC88_PC00301
pseudo: true
so part of: sequence
location: 343142..>343339
location: region:343142-343339:1
so has part: feature:343142-343339:1:exon
subclass of: SO_0000010

45960612
type: Gene
SIO_000068: ncbigene

position:343142:1
position: 343142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343339:1
position: 343339
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343142-343339:1:exon

AMC88_RS26760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26760
old locus tag: AMC88_PC00301
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018247185.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AMC88_RS26760
subclass of: SO_0000673
so part of: AMC88_RS26760
location: 343142..>343339
location: region:343142-343339:1
so has part: feature:343142-343339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:343142-343339:1:exon

AMC88_RS26765
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: hemN
locus tag: AMC88_RS26765
old locus tag: AMC88_PC00302
so part of: sequence
location: 343428..344774
location: region:343428-344774:1
so has part: feature:343428-344774:1:exon
subclass of: SO_0000010

45960613
type: Gene
SIO_000068: ncbigene

position:343428:1
position: 343428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344774:1
position: 344774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343428-344774:1:exon

AMC88_RS26765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: hemN
locus tag: AMC88_RS26765
old locus tag: AMC88_PC00302
EC number: 1.3.98.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018247211.1
GO function: GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxygen-independent coproporphyrinogen III oxidase
translation: MRAPSSIFVPNTNSGAQLPWYTIYPTIQEFSPEIGAHTYEQWLRSQGTDDAVSLYLHIPFCRSMCWYCGFPTSITRRDTLITDYLAMLREEIRLVAEQVPQALSVGDVHFGGGSPTIMPSADFLSLMELLRGRFALERGATIAVEVDPRTFTTDMAEALERTGVNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLYGVRRINFDLMFGLPNQTVQSCLESAMLAIAMRPDRLAVFGYSHVPSFRKNQRLIDTAALPDIAARAEQASAMADTLVAAGYLQIGLDHFALPDDELAIAQRAGRLRRNSLGYSAETCSTVIGLGASAIGRCGDGYVQNDLTQSCYNRHIASGRLAISRGYRLATEDRVRAAIIEQLMCYLEADISAICTAQGFDQTHLVSSAKQLEILAEDGIVEFDNGLVSVRHERRSALRHVAAAFDAYLGRQPI
SIO_010081: AMC88_RS26765
subclass of: SO_0000673
so part of: AMC88_RS26765
location: 343428..344774
location: region:343428-344774:1
so has part: feature:343428-344774:1:exon

WP_080712026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343428-344774:1:exon

AMC88_RS26770
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26770
old locus tag: AMC88_PC00303
so part of: sequence
location: complement(345325..345864)
location: region:345325-345864:-1
so has part: feature:345325-345864:-1:exon
subclass of: SO_0000010

45960614
type: Gene
SIO_000068: ncbigene

position:345325:-1
position: 345325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345864:-1
position: 345864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345325-345864:-1:exon

AMC88_RS26770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26770
old locus tag: AMC88_PC00303
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004679185.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASPWKLLARLISPGREQKRENGSDQKVTPDTLAIAGPTETPAEKSLISAVRPASEGPPRHGHSPAISTEFVVSKEVGIGGHDQVEGQDAKNVEAADPPPFGGLSTDIAAGHDATRLERTLEVAPRKKASAAIANAAPAVHTADQMSLDEDIRVLRRQLARKLRLQNAQLRTMLERFER
SIO_010081: AMC88_RS26770
subclass of: SO_0000673
so part of: AMC88_RS26770
location: complement(345325..345864)
location: region:345325-345864:-1
so has part: feature:345325-345864:-1:exon

WP_004679185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345325-345864:-1:exon

AMC88_RS26775
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26775
so part of: sequence
location: complement(345993..346667)
location: region:345993-346667:-1
so has part: feature:345993-346667:-1:exon
subclass of: SO_0000010

45960615
type: Gene
SIO_000068: ncbigene

position:345993:-1
position: 345993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346667:-1
position: 346667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345993-346667:-1:exon

AMC88_RS26775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26775
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489415.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MKKVQRSFAVEYKNGRRKLDARSNSIWGNVDLKSVARDLEEEALPFLSGSSQSGKPDSEMSLPEQDQAEQLLTAPLGPSTTASDTQEMSMADETNTTTKVDGQTVVETPNAPKKQRKPRAKKVAALETALADATAEPAAALAGDGGVKRRGRKTKAIEATASAKRAPVRRAPKAVQAAPAAPMTASDEMADLLQLEEENQRLRKLLAGKLRAENEDLRKRLKLD
SIO_010081: AMC88_RS26775
subclass of: SO_0000673
so part of: AMC88_RS26775
location: complement(345993..346667)
location: region:345993-346667:-1
so has part: feature:345993-346667:-1:exon

WP_029875595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345993-346667:-1:exon

AMC88_RS32615
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32615
so part of: sequence
location: 346843..347259
location: region:346843-347259:1
so has part: feature:346843-347259:1:exon
subclass of: SO_0000010

45961666
type: Gene
SIO_000068: ncbigene

position:346843:1
position: 346843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347259:1
position: 347259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346843-347259:1:exon

AMC88_RS32615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053452.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKEPRTNPGFSFVGWRFKDQMLRTYAGENVEALGPRFAALAAAVLTKTERSFLAASAAIRLIDVPRRTCGLALSAETRVAKECCFYDKTRGVCRSNVTGGSALHTAAIERRMGSPLASLLSHAIVFVNAFHPNNRFY
SIO_010081: AMC88_RS32615
subclass of: SO_0000673
so part of: AMC88_RS32615
location: 346843..347259
location: region:346843-347259:1
so has part: feature:346843-347259:1:exon

WP_011053452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346843-347259:1:exon

AMC88_RS26785
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26785
old locus tag: AMC88_PC00305
so part of: sequence
location: 348020..350077
location: region:348020-350077:1
so has part: feature:348020-350077:1:exon
subclass of: SO_0000010

45960616
type: Gene
SIO_000068: ncbigene

position:348020:1
position: 348020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350077:1
position: 350077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348020-350077:1:exon

AMC88_RS26785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26785
old locus tag: AMC88_PC00305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053454.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbamoyltransferase
translation: MLCLGLSGGLSRVYENSFDLPNTFMHDGAAVLVRDGRVIAAVEEERLNRIKHSNKLPTRSIQYCLASAGVHLSDIDRIAYYATEAYCNAVLERVRLSHPSTPIPDARLLLCGLLGQEFGAEIDPSRVSFVSHHMSHAVSSFFMSGFERSLVLSIDGGGDFLSGLLAIGSSTEIEPLVTFPENDSLGLLYLETIRYLGYGAFDEYKIMGLAPYGNPASYREIFEQFYELLDDGGYRVHLDRVGPTLLSNIQIRQKGMPFTQQHKDVSASLQEALERIVFHVLRHYTKVTGIERLCLAGGVAHNCTLNGKLLYSGMFDDIFVQPAAHDAGCALGAALMASHDLGHPAPRERLQNVYWGPDLESEGSVEEELFAWGQHLEIERSDDVTGKAAEWIADGAVIAWVQGRSEFGPRALGNRSILADPRPASNKDRINMMVKKREGYRPFAPSVLEEDAVEFFDLPGTLRKFPFMNFVVSVREPKRSSLGAITHVDGTARLQTVSRETNPAYWELINAFGKRTGVPILLNTSFNNNAEPVVDSVRDAVTTFLTTDLDALVIGPFLVKKRISTMEEWNKLAVSLPPYASLHQARAYSTLDRQETVCEIRTGASSLQAVRISPELFEQLIRIEGEALVGDILDGIAPVSGSRETFLNELRQIWEQRCICLSPVRGRKSQVSVPAEASVTSGLSA
SIO_010081: AMC88_RS26785
subclass of: SO_0000673
so part of: AMC88_RS26785
location: 348020..350077
location: region:348020-350077:1
so has part: feature:348020-350077:1:exon

WP_011053454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348020-350077:1:exon

AMC88_RS26790
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26790
old locus tag: AMC88_PC00306
so part of: sequence
location: 350272..350667
location: region:350272-350667:1
so has part: feature:350272-350667:1:exon
subclass of: SO_0000010

45960617
type: Gene
SIO_000068: ncbigene

position:350272:1
position: 350272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350667:1
position: 350667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350272-350667:1:exon

AMC88_RS26790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26790
old locus tag: AMC88_PC00306
inference: COORDINATES: protein motif:HMM:TIGR01444.1
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FkbM family methyltransferase
translation: MDPVCELNVHRQIVSLLDKPNPVIFDIGCNDGSDAQRFLRLLPSAQLYCFEPDPRAAARFKEKMGSDRDRMRLSEVAISDRNGMIEFHPSNGNDSAKEWDLSGSIRRPKNHLSEYEWVRFDPPISVETRSC
SIO_010081: AMC88_RS26790
subclass of: SO_0000673
so part of: AMC88_RS26790
location: 350272..350667
location: region:350272-350667:1
so has part: feature:350272-350667:1:exon

WP_011053455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350272-350667:1:exon

AMC88_RS34255
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34255
old locus tag: AMC88_PC00307
so part of: sequence
location: 350727..351158
location: region:350727-351158:1
so has part: feature:350727-351158:1:exon
subclass of: SO_0000010

70363085
type: Gene
SIO_000068: ncbigene

position:350727:1
position: 350727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351158:1
position: 351158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350727-351158:1:exon

AMC88_RS34255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34255
old locus tag: AMC88_PC00307
inference: COORDINATES: protein motif:HMM:NF033580.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MARGDLSDEEWRIVEPLLPTERGRKSRPSHDNRRFFNGMLHVLRVGCPWRDMHERYGKWNSVYVRFRSWAEQGVWDALLETLVELGLTDDWQHMIDSTTVRGHSQAAGAKGGLIRRVLVDHAAALRQKSMPAQTVRDVLSALS
SIO_010081: AMC88_RS34255
subclass of: SO_0000673
so part of: AMC88_RS34255
location: 350727..351158
location: region:350727-351158:1
so has part: feature:350727-351158:1:exon

WP_064820031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350727-351158:1:exon

AMC88_RS34260
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34260
so part of: sequence
location: 351162..351512
location: region:351162-351512:1
so has part: feature:351162-351512:1:exon
subclass of: SO_0000010

70363086
type: Gene
SIO_000068: ncbigene

position:351162:1
position: 351162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351512:1
position: 351512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351162-351512:1:exon

AMC88_RS34260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34260
inference: COORDINATES: protein motif:HMM:NF024975.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
translation: MARLLIIASAVPALLTIPVGKPKSFLADKGYDGDSAREELLIHGIRPVIPPKANRKDPPSCDFKVYKDRNRIERMFNRLKQFRRIATRYDKTRTSFEAFLLLAAAKIWLPHFMERL
SIO_010081: AMC88_RS34260
subclass of: SO_0000673
so part of: AMC88_RS34260
location: 351162..351512
location: region:351162-351512:1
so has part: feature:351162-351512:1:exon

WP_011053457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351162-351512:1:exon

AMC88_RS33390
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33390
pseudo: true
so part of: sequence
location: 352000..>352294
location: region:352000-352294:1
so has part: feature:352000-352294:1:exon
subclass of: SO_0000010

45961743
type: Gene
SIO_000068: ncbigene

position:352000:1
position: 352000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352294:1
position: 352294
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352000-352294:1:exon

AMC88_RS33390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611958.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AMC88_RS33390
subclass of: SO_0000673
so part of: AMC88_RS33390
location: 352000..>352294
location: region:352000-352294:1
so has part: feature:352000-352294:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352000-352294:1:exon

AMC88_RS26810
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: istB
locus tag: AMC88_RS26810
pseudo: true
so part of: sequence
location: <352308..352977
location: region:352308-352977:1
so has part: feature:352308-352977:1:exon
subclass of: SO_0000010

45960618
type: Gene
SIO_000068: ncbigene

position:352308:1
position: 352308
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:352977:1
position: 352977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352308-352977:1:exon

AMC88_RS26810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: istB
locus tag: AMC88_RS26810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017996660.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
SIO_010081: AMC88_RS26810
subclass of: SO_0000673
so part of: AMC88_RS26810
location: <352308..352977
location: region:352308-352977:1
so has part: feature:352308-352977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352308-352977:1:exon

AMC88_RS26815
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nolE
locus tag: AMC88_RS26815
old locus tag: AMC88_PC00310
so part of: sequence
location: 353366..353698
location: region:353366-353698:1
so has part: feature:353366-353698:1:exon
subclass of: SO_0000010

45960619
type: Gene
SIO_000068: ncbigene

position:353366:1
position: 353366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353698:1
position: 353698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353366-353698:1:exon

AMC88_RS26815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nolE
locus tag: AMC88_RS26815
old locus tag: AMC88_PC00310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018247213.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NolE
translation: MKVIGYYVIVAALLALTLRAGPSLAADDRNQDCGPAASDPRANLNGADKAHSAEHTQDFNCQDTPAEEGECYECVLPPQVHIEGAEVIDVADRNLYPRKTLLLARMIRHH
SIO_010081: AMC88_RS26815
subclass of: SO_0000673
so part of: AMC88_RS26815
location: 353366..353698
location: region:353366-353698:1
so has part: feature:353366-353698:1:exon

WP_064820032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353366-353698:1:exon

AMC88_RS26820
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nodD1
locus tag: AMC88_RS26820
old locus tag: AMC88_PC00311
so part of: sequence
location: 353867..354805
location: region:353867-354805:1
so has part: feature:353867-354805:1:exon
subclass of: SO_0000010

45960620
type: Gene
SIO_000068: ncbigene

position:353867:1
position: 353867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354805:1
position: 354805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353867-354805:1:exon

AMC88_RS26820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nodD1
locus tag: AMC88_RS26820
old locus tag: AMC88_PC00311
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018247214.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator NodD1
translation: MRFKGLDLNLLVALDALMTERNLTAAARSINLSQPAMSAAVGRLRTYFNDDLFTMVGRELVPTPRAERLAPSVREALLHIQVSIISWDPFCPAQSDRCFRVILSDYAALVFFEKVVTRVAREAPAVSFELLPIADNYDDYLRRGDADFLIFPELLMSRAHPKVALFEETLVCVGCRSNKLLSEQLTLERYMSMGHVVVKFGNAASIEEWCLLGHGLKRHVEVVVQGFSMVPFMLSGTERIATMPLRLVKQLEKTIPLRIADLPLPLPAFTQALQWPALHNSDQASLWMRDVLCQEASRMPSPHEVMRRLRIS
SIO_010081: AMC88_RS26820
subclass of: SO_0000673
so part of: AMC88_RS26820
location: 353867..354805
location: region:353867-354805:1
so has part: feature:353867-354805:1:exon

WP_029532439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353867-354805:1:exon

AMC88_RS26825
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26825
old locus tag: AMC88_PC00312
so part of: sequence
location: complement(355158..355574)
location: region:355158-355574:-1
so has part: feature:355158-355574:-1:exon
subclass of: SO_0000010

45960621
type: Gene
SIO_000068: ncbigene

position:355158:-1
position: 355158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355574:-1
position: 355574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355158-355574:-1:exon

AMC88_RS26825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26825
old locus tag: AMC88_PC00312
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008536490.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MKVISIATALFALACPANAFENKAVAATLILRTDRTIAGQPIIVPRKDVEVIASIYEIAPGATLPIHQHRYQRYGYVLSGEITVTNTESGKESIFTAGDFIVESWGIWHKGANNGTEPVKLLVIDQVEKGSENVLPQK
SIO_010081: AMC88_RS26825
subclass of: SO_0000673
so part of: AMC88_RS26825
location: complement(355158..355574)
location: region:355158-355574:-1
so has part: feature:355158-355574:-1:exon

WP_010020624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355158-355574:-1:exon

AMC88_RS26830
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26830
old locus tag: AMC88_PC00313
so part of: sequence
location: complement(355781..356569)
location: region:355781-356569:-1
so has part: feature:355781-356569:-1:exon
subclass of: SO_0000010

45960622
type: Gene
SIO_000068: ncbigene

position:355781:-1
position: 355781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356569:-1
position: 356569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355781-356569:-1:exon

AMC88_RS26830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26830
old locus tag: AMC88_PC00313
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008536489.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MDEGCAAALPANAFNWIAIWRRNYLAWKKVALASIVGSLADPMIYLFGLGLGLGIIVGRVDGTTYVAFLAGGMVATSAMTSATFETIYAAFTRMHAQRTWEAMLYTQMTLGDIILGELAWAASKAFLAGTGIIIVATVLGYATWPSVVYVLPIIMLTGFAFASLAMVVTALAPSYEYFIFYQTLVLTPMLFLCGAVFPITQLPQTFQQVAQFLPLAHAIDLIRPAMLGRPASSMGLHIGALCIYALLPFFLSAALLRRRLMS
SIO_010081: AMC88_RS26830
subclass of: SO_0000673
so part of: AMC88_RS26830
location: complement(355781..356569)
location: region:355781-356569:-1
so has part: feature:355781-356569:-1:exon

WP_011053461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355781-356569:-1:exon

AMC88_RS26835
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nodI
locus tag: AMC88_RS26835
old locus tag: AMC88_PC00314
so part of: sequence
location: complement(356573..357523)
location: region:356573-357523:-1
so has part: feature:356573-357523:-1:exon
subclass of: SO_0000010

45960623
type: Gene
SIO_000068: ncbigene

position:356573:-1
position: 356573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357523:-1
position: 357523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356573-357523:-1:exon

AMC88_RS26835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nodI
locus tag: AMC88_RS26835
old locus tag: AMC88_PC00314
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737487.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation factor ABC transporter ATP-binding protein NodI
translation: MPVNGARRSDERMFMTAIDFSDVSKTYGDKAVVSALSFRVSPGECFGLLGPNGAGKSTIARMILGMTAPDAGKITVLGVPVPAQARLARKGIGVVPQFDNLEPEFTVRENLLVYSRYFGMNTRKVEAVMSSLLEFARLESKVNARVSELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRSLLTRGKTIILTTHFMEEAERLCDRLCVLEGGRSIAEGRPHDLIDELIGCEVIEIYGGDPHELESLVGPYADRIEISGETLFCYVSDPEQVRVRLRQRAGLRILQRPPNLEDVFLRLTGREMEK
SIO_010081: AMC88_RS26835
subclass of: SO_0000673
so part of: AMC88_RS26835
location: complement(356573..357523)
location: region:356573-357523:-1
so has part: feature:356573-357523:-1:exon

WP_016737487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356573-357523:-1:exon

AMC88_RS34265
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34265
pseudo: true
so part of: sequence
location: complement(<357587..>357874)
location: region:357587-357874:-1
so has part: feature:357587-357874:-1:exon
subclass of: SO_0000010

70363087
type: Gene
SIO_000068: ncbigene

position:357587:-1
position: 357587
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:357874:-1
position: 357874
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357587-357874:-1:exon

AMC88_RS34265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004125972.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: carbamoyltransferase C-terminal domain-containing protein
SIO_010081: AMC88_RS34265
subclass of: SO_0000673
so part of: AMC88_RS34265
location: complement(<357587..>357874)
location: region:357587-357874:-1
so has part: feature:357587-357874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:357587-357874:-1:exon

AMC88_RS26840
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26840
old locus tag: AMC88_PC00315
pseudo: true
so part of: sequence
location: complement(<358004..358207)
location: region:358004-358207:-1
so has part: feature:358004-358207:-1:exon
subclass of: SO_0000010

45960624
type: Gene
SIO_000068: ncbigene

position:358004:-1
position: 358004
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:358207:-1
position: 358207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358004-358207:-1:exon

AMC88_RS26840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26840
old locus tag: AMC88_PC00315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004125972.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: carbamoyltransferase N-terminal domain-containing protein
SIO_010081: AMC88_RS26840
subclass of: SO_0000673
so part of: AMC88_RS26840
location: complement(<358004..358207)
location: region:358004-358207:-1
so has part: feature:358004-358207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358004-358207:-1:exon

AMC88_RS26845
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26845
old locus tag: AMC88_PC00316
so part of: sequence
location: complement(358243..358860)
location: region:358243-358860:-1
so has part: feature:358243-358860:-1:exon
subclass of: SO_0000010

45960625
type: Gene
SIO_000068: ncbigene

position:358243:-1
position: 358243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358860:-1
position: 358860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358243-358860:-1:exon

AMC88_RS26845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26845
old locus tag: AMC88_PC00316
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489576.1
GO function: GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0009877 - nodulation [Evidence IEA]; GO:0009312 - oligosaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation methyltransferase NodS
translation: MNELTQSDNYQLLNRELAAPDPWGLDANPFERERHTQMLRLALAQGSISSALEVGCAAGAFTVQLAPHCKRLTVIDVVPQAIERSRRRIRGSPHISWIVSDVQQFSPDERFDLIVVAEVLYYIGGIAEMRGAVRNLVRMLAPDGYLVFGSARDANCRRWGHVAGAETILGMLNETLLEVERLECRGESVNEDCLLACFRNPFSAS
SIO_010081: AMC88_RS26845
subclass of: SO_0000673
so part of: AMC88_RS26845
location: complement(358243..358860)
location: region:358243-358860:-1
so has part: feature:358243-358860:-1:exon

WP_011053463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358243-358860:-1:exon

AMC88_RS26850
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nodC
locus tag: AMC88_RS26850
old locus tag: AMC88_PC00317
so part of: sequence
location: complement(358876..360207)
location: region:358876-360207:-1
so has part: feature:358876-360207:-1:exon
subclass of: SO_0000010

45960626
type: Gene
SIO_000068: ncbigene

position:358876:-1
position: 358876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360207:-1
position: 360207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358876-360207:-1:exon

AMC88_RS26850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nodC
locus tag: AMC88_RS26850
old locus tag: AMC88_PC00317
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636999.1
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
GO process: GO:0009877 - nodulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chitooligosaccharide synthase NodC
translation: MDMLDTTSTVAVSLYALLSTAYKSMQAVYSLPTDVSLASHGLGGFDELPSVDVIVPSFNEDPRTLSECLASIAGQEYGGRLQVYLVDDGSENREALRLVHEAFARDPRFNILLLPQNVGKRKAQIAAIRRSAGDMVLNVDSDTILASDVIRKLVPKMQDAAVGAAMGQLTARNRNDSWLTRLIDMEYWLACNEERAAQARFGAVMCCCGPCVMYRRSALASLLDQYESQYFRGKPSDFGEDRHLTILMLKAGFRTEYVPSAIAATVVPNKLGPYLRQQLRWARSTFRDTLLGLRLLPTLNRFLTLDVVGQNLGPLLLALSVLTGLAQLALTGTAPWLAALMIVAMTMIRCSVVALRARQLRFLGFSLHTFINIFLLLPLKAYALCTLSNSDWLSRSSAGNSNQHPTADARTTECSGHATAPRRLKPARHPARRTTSDCMCSDE
SIO_010081: AMC88_RS26850
subclass of: SO_0000673
so part of: AMC88_RS26850
location: complement(358876..360207)
location: region:358876-360207:-1
so has part: feature:358876-360207:-1:exon

WP_029875592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358876-360207:-1:exon

AMC88_RS26855
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nodB
locus tag: AMC88_RS26855
old locus tag: AMC88_PC00318
so part of: sequence
location: complement(360215..360874)
location: region:360215-360874:-1
so has part: feature:360215-360874:-1:exon
subclass of: SO_0000010

45960627
type: Gene
SIO_000068: ncbigene

position:360215:-1
position: 360215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360874:-1
position: 360874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360215-360874:-1:exon

AMC88_RS26855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nodB
locus tag: AMC88_RS26855
old locus tag: AMC88_PC00318
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004679213.1
GO function: GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO process: GO:0009877 - nodulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chitooligosaccharide deacetylase NodB
translation: MTHLDCSCEVHGERDDGTGRHSVYLTFDDGPHPFCTPEILDILAEHRVPATFFVIGEFLADQSKLIQRMIAEGHEVANHTMTHPDLSDCEPDEVQRQILETNRAIKMASPQAVVRHIRAPYGIWTEEVLKASANAELTAVHWSVDPRDWSLPGADAIVNDVLQSVRPGSIVLLHDGCPSSEMQQGADHSLRHQTIMALSSIIPALHDRGFVFRSLPREF
SIO_010081: AMC88_RS26855
subclass of: SO_0000673
so part of: AMC88_RS26855
location: complement(360215..360874)
location: region:360215-360874:-1
so has part: feature:360215-360874:-1:exon

WP_011053465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360215-360874:-1:exon

AMC88_RS26860
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26860
old locus tag: AMC88_PC00319
so part of: sequence
location: 362502..363488
location: region:362502-363488:1
so has part: feature:362502-363488:1:exon
subclass of: SO_0000010

45960628
type: Gene
SIO_000068: ncbigene

position:362502:1
position: 362502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363488:1
position: 363488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362502-363488:1:exon

AMC88_RS26860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26860
old locus tag: AMC88_PC00319
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010025697.1
GO function: GO:0016758 - hexosyltransferase activity [Evidence IEA]
GO process: GO:0009877 - nodulation [Evidence IEA]; GO:0009312 - oligosaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NodZ
translation: MLAGDLKRDRYVVSRRRTGFGDCLWSLAAAWRYAQRTGRTLAIDWRGSCYLNQPFTNAFTVFFEPIQDIAGVRVICDDQINQFSFPGPFFPSWWNKPSIESVYRPDEQIFRERDELTELLQAQDDTDANTVVCDACLMWRCDQAAERQIFQSLNLRPEIQARIHAIYQEHFKGRSIIGVHVRHGNGEDIMDHTPYWADPELALRQVCTAIEKAKALPHRRPVMVFLCTDSAQVRDHLLGVFPDLITIPKCFQAAQAGPLHSASLGVDGGISALTEMYLLARCDTVIRFPPTSAFTRYARLFVPRVIEFDLKNPTRLILTDESSEHEPA
SIO_010081: AMC88_RS26860
subclass of: SO_0000673
so part of: AMC88_RS26860
location: 362502..363488
location: region:362502-363488:1
so has part: feature:362502-363488:1:exon

WP_010025697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362502-363488:1:exon

AMC88_RS26865
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26865
pseudo: true
so part of: sequence
location: 364177..>364362
location: region:364177-364362:1
so has part: feature:364177-364362:1:exon
subclass of: SO_0000010

45960629
type: Gene
SIO_000068: ncbigene

position:364177:1
position: 364177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364362:1
position: 364362
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364177-364362:1:exon

AMC88_RS26865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004674430.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AMC88_RS26865
subclass of: SO_0000673
so part of: AMC88_RS26865
location: 364177..>364362
location: region:364177-364362:1
so has part: feature:364177-364362:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364177-364362:1:exon

AMC88_RS26870
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26870
old locus tag: AMC88_PC00321
so part of: sequence
location: complement(364638..365303)
location: region:364638-365303:-1
so has part: feature:364638-365303:-1:exon
subclass of: SO_0000010

45960630
type: Gene
SIO_000068: ncbigene

position:364638:-1
position: 364638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365303:-1
position: 365303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364638-365303:-1:exon

AMC88_RS26870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26870
old locus tag: AMC88_PC00321
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004674428.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MLSRHPILLRSDLFHGLDKARIEELADAAQFQIFAPDERIIAEGQQASFVYCVMRGFVRLSKSESAGRQADICICEPGETFGEYLLSAGGSYTYSAWSADGAEVALFDLVELRALADRDPVMRRNVMRIMARHLLGAMDCIAGDRLHTAAQRVANYLVSRCPASASQATFRLPYRKRILAGKLGVAPEALSRAFAALGPAGVEVRGRVVVVDSVDLLRKAC
SIO_010081: AMC88_RS26870
subclass of: SO_0000673
so part of: AMC88_RS26870
location: complement(364638..365303)
location: region:364638-365303:-1
so has part: feature:364638-365303:-1:exon

WP_064820033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364638-365303:-1:exon

AMC88_RS26875
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: ccoS
locus tag: AMC88_RS26875
old locus tag: AMC88_PC00322
so part of: sequence
location: complement(365335..365493)
location: region:365335-365493:-1
so has part: feature:365335-365493:-1:exon
subclass of: SO_0000010

45960631
type: Gene
SIO_000068: ncbigene

position:365335:-1
position: 365335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365493:-1
position: 365493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365335-365493:-1:exon

AMC88_RS26875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: ccoS
locus tag: AMC88_RS26875
old locus tag: AMC88_PC00322
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003549679.1
GO process: GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cbb3-type cytochrome oxidase assembly protein CcoS
translation: MNMLIYLMPIALLMGGMGLLAFLWSLTSRQYEDLEGAAWRILVEDETDCKRP
SIO_010081: AMC88_RS26875
subclass of: SO_0000673
so part of: AMC88_RS26875
location: complement(365335..365493)
location: region:365335-365493:-1
so has part: feature:365335-365493:-1:exon

WP_011053470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365335-365493:-1:exon

AMC88_RS26880
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26880
old locus tag: AMC88_PC00323
so part of: sequence
location: complement(365490..367760)
location: region:365490-367760:-1
so has part: feature:365490-367760:-1:exon
subclass of: SO_0000010

45960632
type: Gene
SIO_000068: ncbigene

position:365490:-1
position: 365490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367760:-1
position: 367760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365490-367760:-1:exon

AMC88_RS26880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26880
old locus tag: AMC88_PC00323
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003568511.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation-translocating P-type ATPase
translation: MTCCSMDAESVLGLSATSASAEEVCLASHPLGAGLRQVDLSVPDVHCGDCILTLEKALSALAFVRKARVNLTARRVTCVYQEEIEAKATDPSEILAAITLAGYRAHLITSTAPETDRIRNQLLLAIGVSGFAAANIMMLSVSVWSGADAATRDMFHWISAMIAAPALVYGGRFFFKSAWSGLKRRRTNMDVPISLAVTLSYAVSLWETMHHGEHAWFDASVSLLFFLLIGRTLDHVMREKARAAINGLARLAPRGAQLMMPDGSRHYIPVEEIAVGDNIAIAAGQRIPVDGMIVSGESDVDLSIVTGESSTVAVAAGSALNSGAMNLTGSLVLRATKVARDSLLSEIIGLMEAAEGGRARYRRVADRAAALYSPAVHLLALASFLAWGLLGGDWKQAMLVAVAVLIITCPCALGLAVPVVQVVAAGELFRRGIVVKDGSALERLADADIVAFDKTGTLTMGRPRLVRIDSIAGNRAIVCAMAAHSRHPLSQGLVRDIDISYPFAFDRVTEIAGGGLEAWQGADFYRLGNRAFACGTGLTPAGDTPFSEVVLSKNGVDLARFLFDDTLRPGAAETFRQLAAAGIETLIVSGDRQAVVDNTARALGIGKALGDLGPKQKVEELQRLGAEGYRVLMVGDGINDAPALAAAQVSMAPATASDIGRQAADLIFFNDRLDAVPEAIAVARRSASLIRQNFALAIGYNVLAVPIAIAGLATPLIAAVAMSTSSIIVVTNALRLNAFGLRSEPLAGGRAEVETA
SIO_010081: AMC88_RS26880
subclass of: SO_0000673
so part of: AMC88_RS26880
location: complement(365490..367760)
location: region:365490-367760:-1
so has part: feature:365490-367760:-1:exon

WP_064830114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365490-367760:-1:exon

AMC88_RS26885
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26885
old locus tag: AMC88_PC00324
so part of: sequence
location: complement(367757..368242)
location: region:367757-368242:-1
so has part: feature:367757-368242:-1:exon
subclass of: SO_0000010

45960633
type: Gene
SIO_000068: ncbigene

position:367757:-1
position: 367757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368242:-1
position: 368242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367757-368242:-1:exon

AMC88_RS26885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26885
old locus tag: AMC88_PC00324
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053472.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FixH family protein
translation: MKTSTQGFTGLHVLLATSAFFAVVIAVNATMAFYAASSWSGIVVENTYVASQEFNTRAAAMKAMAASGVEGALVVKGSQIRYDIHDQAGTPAIIDDVTLNFKRPVGDHEDFRVTLRKTGEGRFEADHQVVAGDWIVEAISRMNGAVVMHEAKRFDTAEFRQ
SIO_010081: AMC88_RS26885
subclass of: SO_0000673
so part of: AMC88_RS26885
location: complement(367757..368242)
location: region:367757-368242:-1
so has part: feature:367757-368242:-1:exon

WP_011053472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367757-368242:-1:exon

AMC88_RS26890
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: ccoG
locus tag: AMC88_RS26890
old locus tag: AMC88_PC00325
so part of: sequence
location: complement(368239..369813)
location: region:368239-369813:-1
so has part: feature:368239-369813:-1:exon
subclass of: SO_0000010

45960634
type: Gene
SIO_000068: ncbigene

position:368239:-1
position: 368239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369813:-1
position: 369813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368239-369813:-1:exon

AMC88_RS26890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: ccoG
locus tag: AMC88_RS26890
old locus tag: AMC88_PC00325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011654242.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase accessory protein CcoG
translation: MNLYTRPNLNDIDHVRVEPVNARRNRQPLYAPRKKIFPKRAEGPFRRFKWVLMLLTLGTYYLAPWIRWDRGPYAPNQAILVDLASRRFFFFFIEIWPQEFYYVAGLLVMAGFGLFLLTAAVGRAWCGYACPQTVWVDLFLVVERAVEGDRNARMKLDADPFTFDKLRKRVIKHAIWLLIAIATGGAWIFYFADAPSLAASLFDGSAPAAAYATIATLTATTYVLGGLMREQTCTYMCPWPRIQGAMLDENSLVVTYNDWRGEQRSRHGKKAQGLPVGDCVDCNACVAVCPMGIDIRDGQQMECITCALCIDACGGVMDKLGKPHGLIAYATLKEYSSNMSLATDGGRTAIQPSNVRNDDGSFMPAVRNFDWRIIFRRRIVFYGVVWASIGVAMVVHLALRDRLRLNVIHDRNPQYVLESDGSIRNGYTLHVLNMVPKPRDVTITLVGLEGGTMRIPEFGGQDARSFTAHVEPDAATTLKVFVTRAPDGAEINEFLFVIEDIGQDAGQADRASYRAAFNAPGDVK
SIO_010081: AMC88_RS26890
subclass of: SO_0000673
so part of: AMC88_RS26890
location: complement(368239..369813)
location: region:368239-369813:-1
so has part: feature:368239-369813:-1:exon

WP_011053473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368239-369813:-1:exon

AMC88_RS34270
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34270
old locus tag: AMC88_PC00326
so part of: sequence
location: complement(369981..370166)
location: region:369981-370166:-1
so has part: feature:369981-370166:-1:exon
subclass of: SO_0000010

70363088
type: Gene
SIO_000068: ncbigene

position:369981:-1
position: 369981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370166:-1
position: 370166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369981-370166:-1:exon

AMC88_RS34270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34270
old locus tag: AMC88_PC00326
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003590892.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAHDRNPILPLYGAPRAVIRSRVSARAQQMPASSEQDDPAKIGNSMVSLICLKDHKQTSR
SIO_010081: AMC88_RS34270
subclass of: SO_0000673
so part of: AMC88_RS34270
location: complement(369981..370166)
location: region:369981-370166:-1
so has part: feature:369981-370166:-1:exon

WP_004674416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369981-370166:-1:exon

AMC88_RS26900
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: ccoP
locus tag: AMC88_RS26900
old locus tag: AMC88_PC00327
so part of: sequence
location: complement(370178..371041)
location: region:370178-371041:-1
so has part: feature:370178-371041:-1:exon
subclass of: SO_0000010

45960636
type: Gene
SIO_000068: ncbigene

position:370178:-1
position: 370178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371041:-1
position: 371041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370178-371041:-1:exon

AMC88_RS26900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: ccoP
locus tag: AMC88_RS26900
old locus tag: AMC88_PC00327
EC number: 7.1.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020048100.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome-c oxidase, cbb3-type subunit III
translation: MSQKHIDELSGVETTGHEWDGIQELNNPMPRWWIWTFYVTILWAIGYAIAYPAIPMITSATNGYLGYSTRAELQQDLNLAKSSQTEFHDLIAAKTVEEIDADPALRKFAIAGGASAFKVNCAPCHGSGASGGPGFPNLNDDDWLWGGDLNAIQATISHGIRFDGDTDSHSSEMPPFAGVLEPIQMKQVAAFVWGLTNTPSDVGLAAAGKQVFFDNCAPCHGEDAKGKVEMGAPDLADAIWLKSRGEDAILRQVASPKHGVMPAWAARLGDTTVNELTIFVHALGGGT
SIO_010081: AMC88_RS26900
subclass of: SO_0000673
so part of: AMC88_RS26900
location: complement(370178..371041)
location: region:370178-371041:-1
so has part: feature:370178-371041:-1:exon

WP_004674413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370178-371041:-1:exon

AMC88_RS26905
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26905
old locus tag: AMC88_PC00328
so part of: sequence
location: complement(371043..371195)
location: region:371043-371195:-1
so has part: feature:371043-371195:-1:exon
subclass of: SO_0000010

45960637
type: Gene
SIO_000068: ncbigene

position:371043:-1
position: 371043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371195:-1
position: 371195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371043-371195:-1:exon

AMC88_RS26905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26905
old locus tag: AMC88_PC00328
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007795252.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cbb3-type cytochrome c oxidase subunit 3
translation: METYTAMRHFSDSWGLLAMAAFFVGAVMLTLRPGSKQTAKDAADIPLKDD
SIO_010081: AMC88_RS26905
subclass of: SO_0000673
so part of: AMC88_RS26905
location: complement(371043..371195)
location: region:371043-371195:-1
so has part: feature:371043-371195:-1:exon

WP_004674411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371043-371195:-1:exon

AMC88_RS26910
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: ccoO
locus tag: AMC88_RS26910
old locus tag: AMC88_PC00329
so part of: sequence
location: complement(371204..371938)
location: region:371204-371938:-1
so has part: feature:371204-371938:-1:exon
subclass of: SO_0000010

45960638
type: Gene
SIO_000068: ncbigene

position:371204:-1
position: 371204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371938:-1
position: 371938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371204-371938:-1:exon

AMC88_RS26910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: ccoO
locus tag: AMC88_RS26910
old locus tag: AMC88_PC00329
EC number: 7.1.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737483.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome-c oxidase, cbb3-type subunit II
translation: MASLLDKHKTLEKNATLLLVGSLLVVSIGGIVEIAPLFYLQNTIEKVEGMRPYTPLELAGRNIYIREGCYLCHSQMIRPFRDEVERYGHYSLAAESMYDHPFQWGSKRTGPDLARVGGRYSNEWHVQHLANPRAVVPESIMPSYAFLEEKEVTVRSIGEDLKANEDVGVPYSDDMLANAEADMRAQADPNADTAALLKRYPNANVGDLDGDPTRLTEMDALVSYLQMLGTLVNFSTYDDATGYR
SIO_010081: AMC88_RS26910
subclass of: SO_0000673
so part of: AMC88_RS26910
location: complement(371204..371938)
location: region:371204-371938:-1
so has part: feature:371204-371938:-1:exon

WP_004674404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371204-371938:-1:exon

AMC88_RS26915
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: ccoN
locus tag: AMC88_RS26915
old locus tag: AMC88_PC00330
so part of: sequence
location: complement(371947..373569)
location: region:371947-373569:-1
so has part: feature:371947-373569:-1:exon
subclass of: SO_0000010

45960639
type: Gene
SIO_000068: ncbigene

position:371947:-1
position: 371947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373569:-1
position: 373569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371947-373569:-1:exon

AMC88_RS26915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: ccoN
locus tag: AMC88_RS26915
old locus tag: AMC88_PC00330
EC number: 7.1.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003549660.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome-c oxidase, cbb3-type subunit I
translation: MNYTTETMVIAVAAFLALLAAAFAHDHLFAVHMGILCLCLVAGTLLLVRNAEFSPTGQQRKTELTGYCDEVIRYGLIATVFWGVVGFLVGVIIALQLAFPDLNIAPYWNFGRLRPVHTSAVIFAFGGNALIMTSFYVVQRTCRARLFGGTLAWFVFWGYQLFIVMAATGYVIGINQSREYAEPEWYVDLWLTIVWVAYLAVYLGTILKRKEPHIYVANWFYLSFIVTIAMLHVVNNLAVPASFLGSKSYSLFSGVQDALTQWWYGHNAVGFFLTAGFLGMMYYFVPKQANRPVYSYRLSIIHFWALIFMYIWAGPHHLHYTALPDWAQTLGMVFSVMLWMPSWGGMINGLMTLSGAWDKIRTDPIIRMMIVAIAFYGMSTFEGPMMSIKAVNSLSHYTEWTIGHVHSGALGWVGMITFGAIYYLTPKLWGRERLYSLRMVNWHFWLATLGIVIYAAVLWVAGIQQGLMWREYNSQGFLVYSFAETVAAMIPYYVLRAVGGALYLAGGLVMAWNVFMTIRGHLRDEAPIPTSLVPQAQPAE
SIO_010081: AMC88_RS26915
subclass of: SO_0000673
so part of: AMC88_RS26915
location: complement(371947..373569)
location: region:371947-373569:-1
so has part: feature:371947-373569:-1:exon

WP_004674403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371947-373569:-1:exon

AMC88_RS33800
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33800
pseudo: true
so part of: sequence
location: 373811..>374527
location: region:373811-374527:1
so has part: feature:373811-374527:1:exon
subclass of: SO_0000010

45961816
type: Gene
SIO_000068: ncbigene

position:373811:1
position: 373811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374527:1
position: 374527
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373811-374527:1:exon

AMC88_RS33800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003581460.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: AMC88_RS33800
subclass of: SO_0000673
so part of: AMC88_RS33800
location: 373811..>374527
location: region:373811-374527:1
so has part: feature:373811-374527:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:373811-374527:1:exon

AMC88_RS26925
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26925
old locus tag: AMC88_PC00332
so part of: sequence
location: 374834..375277
location: region:374834-375277:1
so has part: feature:374834-375277:1:exon
subclass of: SO_0000010

45960640
type: Gene
SIO_000068: ncbigene

position:374834:1
position: 374834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375277:1
position: 375277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374834-375277:1:exon

AMC88_RS26925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26925
old locus tag: AMC88_PC00332
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737107.1
GO function: GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pseudoazurin
translation: MRLKFGLIAAAAALIVSAAPLMAADHQVRMLNKGTEGAMVFEPGFLKIAPGDTVTFIPTDKGHNVETFKGLIPDGVADFKSKPNELYRAKFDVPGVYVLKCTPHSGMGMVALIQVGDSPPNLEAIKTAKVPNMVRKRLDADLTNITQ
SIO_010081: AMC88_RS26925
subclass of: SO_0000673
so part of: AMC88_RS26925
location: 374834..375277
location: region:374834-375277:1
so has part: feature:374834-375277:1:exon

WP_004674399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374834-375277:1:exon

AMC88_RS26930
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: hemN
locus tag: AMC88_RS26930
old locus tag: AMC88_PC00333
so part of: sequence
location: complement(376243..377595)
location: region:376243-377595:-1
so has part: feature:376243-377595:-1:exon
subclass of: SO_0000010

45960641
type: Gene
SIO_000068: ncbigene

position:376243:-1
position: 376243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377595:-1
position: 377595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376243-377595:-1:exon

AMC88_RS26930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: hemN
locus tag: AMC88_RS26930
old locus tag: AMC88_PC00333
EC number: 1.3.98.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053474.1
GO function: GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxygen-independent coproporphyrinogen III oxidase
translation: MSDDLIAKYGDARVPRYTSYPTAAAFSAAVGPDEYAGNLAHIAAAGPVSVYLHVPFCRSICWYCGCHTTITRQDAPVADYLDVMKEEIELVSFAAGNDVPVKYVHFGGGTPSVMKPQEFSALMAKLRSAFTFEAKAGVAVEIDPRTLVAPMIDALAENGVDRASLGVQSFDPIVQAGIKRLQSFEQTERAVAGLRSAGVSSINFDLIYGLPKQTVQSCIETVRLAAELRPERFAVFGYAHIPAFKKNQRLIDEASLPDAKQRNEQAEVIAEELQKAGYLRIGLDHFALPNDQLALAARNRTLRRNFQGYTTDDCDSLIGLGASAIGRLPAGYMQNHVPLGLYAERIAFGVLPTAKGYLLSEEDKLRARVIERLMCDFEADLGQLSSGSGFDTGFLVERNDRLGELMADGVVTISGERIVVCEEARFMVRAVAAAFDAYFSSHGHTHSKAA
SIO_010081: AMC88_RS26930
subclass of: SO_0000673
so part of: AMC88_RS26930
location: complement(376243..377595)
location: region:376243-377595:-1
so has part: feature:376243-377595:-1:exon

WP_064820035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376243-377595:-1:exon

AMC88_RS32660
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32660
so part of: sequence
location: 378074..378304
location: region:378074-378304:1
so has part: feature:378074-378304:1:exon
subclass of: SO_0000010

45961667
type: Gene
SIO_000068: ncbigene

position:378074:1
position: 378074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378304:1
position: 378304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378074-378304:1:exon

AMC88_RS32660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32660
inference: COORDINATES: protein motif:HMM:NF017072.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P) transhydrogenase subunit alpha
translation: MLSPEKTLIAFFYPAANNELLKRALHSGANISAIDMVPRISRAQKMNGKDRGYRAVIEASANFRCFFTGQITARYF
SIO_010081: AMC88_RS32660
subclass of: SO_0000673
so part of: AMC88_RS32660
location: 378074..378304
location: region:378074-378304:1
so has part: feature:378074-378304:1:exon

WP_225880318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378074-378304:1:exon

AMC88_RS26935
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26935
old locus tag: AMC88_PC00334
so part of: sequence
location: complement(378318..378773)
location: region:378318-378773:-1
so has part: feature:378318-378773:-1:exon
subclass of: SO_0000010

45960642
type: Gene
SIO_000068: ncbigene

position:378318:-1
position: 378318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378773:-1
position: 378773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378318-378773:-1:exon

AMC88_RS26935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26935
old locus tag: AMC88_PC00334
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010024976.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phasin
translation: MTKISERSFETIENPGSSSLKVPDQFGASVEKGNKKVTEAFLKFASGAEATQKMLPPILETTSLFGNELWWKTIAALQADAEASFSHLQALLGANSPSQILEQQSTFFRKRVETSLQHAKEVRVLSSRAVEEISKPVKDAFDKVLTDLKAT
SIO_010081: AMC88_RS26935
subclass of: SO_0000673
so part of: AMC88_RS26935
location: complement(378318..378773)
location: region:378318-378773:-1
so has part: feature:378318-378773:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:378318-378773:-1:exon

AMC88_RS26940
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: fdxB
locus tag: AMC88_RS26940
old locus tag: AMC88_PC00335
so part of: sequence
location: complement(379648..379965)
location: region:379648-379965:-1
so has part: feature:379648-379965:-1:exon
subclass of: SO_0000010

45960643
type: Gene
SIO_000068: ncbigene

position:379648:-1
position: 379648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379965:-1
position: 379965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379648-379965:-1:exon

AMC88_RS26940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: fdxB
locus tag: AMC88_RS26940
old locus tag: AMC88_PC00335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004677870.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin III, nif-specific
translation: MTGPFVTRDGSSWVPEYLTCIDATTCIGCGRCFKACSREVMHLYGVGEAGEILGICDDEEEDFDGELNRMIMVVDEAGRCIGCGACARVCPKNCQTHVAADKVTA
SIO_010081: AMC88_RS26940
subclass of: SO_0000673
so part of: AMC88_RS26940
location: complement(379648..379965)
location: region:379648-379965:-1
so has part: feature:379648-379965:-1:exon

WP_004677870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379648-379965:-1:exon

AMC88_RS26945
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26945
old locus tag: AMC88_PC00336
so part of: sequence
location: complement(379962..380165)
location: region:379962-380165:-1
so has part: feature:379962-380165:-1:exon
subclass of: SO_0000010

45960644
type: Gene
SIO_000068: ncbigene

position:379962:-1
position: 379962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380165:-1
position: 380165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379962-380165:-1:exon

AMC88_RS26945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26945
old locus tag: AMC88_PC00336
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009991124.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CCE_0567 family metalloprotein
translation: MSDIVEQLKKVRKLQSRAAAAKMELHDLAEDLPINWARIKTIAGETFDAFAELNAAKEELAALENSR
SIO_010081: AMC88_RS26945
subclass of: SO_0000673
so part of: AMC88_RS26945
location: complement(379962..380165)
location: region:379962-380165:-1
so has part: feature:379962-380165:-1:exon

WP_009991124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379962-380165:-1:exon

AMC88_RS26950
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26950
old locus tag: AMC88_PC00337
so part of: sequence
location: complement(380190..380678)
location: region:380190-380678:-1
so has part: feature:380190-380678:-1:exon
subclass of: SO_0000010

45960645
type: Gene
SIO_000068: ncbigene

position:380190:-1
position: 380190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380678:-1
position: 380678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380190-380678:-1:exon

AMC88_RS26950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26950
old locus tag: AMC88_PC00337
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009991126.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NifX-associated nitrogen fixation protein
translation: MGTLTGSTNGPAVNEDGDLATPFLRCLIRLIRAQDAHGAWEGKSDTDLLADFILTKEQRRKIPIIGDPDPDVLWRLQNFYSCVGLVIEECTGLLASPIMTIGHEGFGRLLLTTGRLVVLSKTLRDVHRFGFETLGKLAETGTKMVDDAIEVIETYPDVARAS
SIO_010081: AMC88_RS26950
subclass of: SO_0000673
so part of: AMC88_RS26950
location: complement(380190..380678)
location: region:380190-380678:-1
so has part: feature:380190-380678:-1:exon

WP_009991126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380190-380678:-1:exon

AMC88_RS26955
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26955
old locus tag: AMC88_PC00338
pseudo: true
so part of: sequence
location: complement(<380724..381014)
location: region:380724-381014:-1
so has part: feature:380724-381014:-1:exon
subclass of: SO_0000010

45960646
type: Gene
SIO_000068: ncbigene

position:380724:-1
position: 380724
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:381014:-1
position: 381014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380724-381014:-1:exon

AMC88_RS26955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26955
old locus tag: AMC88_PC00338
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007539040.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nitrogenase component 1
SIO_010081: AMC88_RS26955
subclass of: SO_0000673
so part of: AMC88_RS26955
location: complement(<380724..381014)
location: region:380724-381014:-1
so has part: feature:380724-381014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380724-381014:-1:exon

AMC88_RS26960
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifK
locus tag: AMC88_RS26960
old locus tag: AMC88_PC00339
so part of: sequence
location: complement(381073..382614)
location: region:381073-382614:-1
so has part: feature:381073-382614:-1:exon
subclass of: SO_0000010

45960647
type: Gene
SIO_000068: ncbigene

position:381073:-1
position: 381073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382614:-1
position: 382614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381073-382614:-1:exon

AMC88_RS26960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifK
locus tag: AMC88_RS26960
old locus tag: AMC88_PC00339
EC number: 1.18.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006331758.1
GO component: GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase molybdenum-iron protein subunit beta
translation: MPQSAEKVLDHAPLFREPEYRQMLAEKKANFECPHPDQVVADQNDFTKTWEYREKNLGREALVVNPAKACQPLGAVFAAAGFEQTMSFVHGSQGCVAYYRSHLSRHFKEPSSAVSSSMTEDAAVFGGLKNMVDGLANTYKLYDPKMIAVSTTCMAEVIGDDLHGFIENAKNEGSVPHDFDVPFAHTPAFVGSHVDGYDGMIKGILENFWKGNERKEVAQAINIIPGFDGFCVGNNRELKRLLDMMGVSYIFIQDASDQFDTPSDGTYRMYDGGTKIEDLKTALNAEATLSLQHYNTRKTLEYCKEVGQVTASFHYPLGVQATDEFLMKVSEITGKEIPPTIGLERGRLVDAMADSQAWLHGKKYAIYGDPDFVYAVARFVLETGGEPTHCLATNGTSAWEAEMKALLASSPFGKDAQVWAGKDLWALRSLLFTEPVDLMIGNSYGKYLERDTGTPLIRLTFPIFDRHHHHRFPLMGYQGGLRVLTTILDKIFDKLDRETSEPGVTDYSYDLTR
SIO_010081: AMC88_RS26960
subclass of: SO_0000673
so part of: AMC88_RS26960
location: complement(381073..382614)
location: region:381073-382614:-1
so has part: feature:381073-382614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381073-382614:-1:exon

AMC88_RS26965
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifD
locus tag: AMC88_RS26965
old locus tag: AMC88_PC00340
so part of: sequence
location: complement(382738..384240)
location: region:382738-384240:-1
so has part: feature:382738-384240:-1:exon
subclass of: SO_0000010

45960648
type: Gene
SIO_000068: ncbigene

position:382738:-1
position: 382738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384240:-1
position: 384240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382738-384240:-1:exon

AMC88_RS26965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifD
locus tag: AMC88_RS26965
old locus tag: AMC88_PC00340
EC number: 1.18.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003532774.1
GO component: GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase molybdenum-iron protein alpha chain
translation: MSLDYENDSVLHEKLIAEVLAQYPDKAAKRRKKHLSVATSRDEPGDEPKALSECDVKSNIKSIPGVMTIRGCAYAGSKGVVWGPVKDMVHISHGPVGCGHYSWSQRRNYYVGLTGIDTFVTLQFTSDFQEKDIVFGGDKKLEQVIDEIEELFPLNNGISVQSECPIGLIGDDIEAVSRKKAKEHEKTIVPVRCEGFRGVSQSLGHHIANDAIRDWVFDKNEVEFETGPYDVNVVGDYNIGGDAWATRILLEEVGLRVVGNWSGDATLAEVERAPKAKLNLIHCYRSMNYICRHMEEKYGIPWMEYNFFGPSQIETSLREIAKHFGPEIVDKTEAVITKYRPLVDAVVDKYRPRLEGKTVMLYVGGLRPRHVITAYEDLGMRIVGTGYEFAHNDDYQRTGHYVNKGTLIYDDVTGYELEKFIEGIRPDLVGSGIKEKYPVQKMGIPFRQMHSWDYSGPYHGYDGFAIFARDMDLAINNPVWDLYDVPWKKEAAPAEAVAAE
SIO_010081: AMC88_RS26965
subclass of: SO_0000673
so part of: AMC88_RS26965
location: complement(382738..384240)
location: region:382738-384240:-1
so has part: feature:382738-384240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:382738-384240:-1:exon

AMC88_RS26970
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifH
locus tag: AMC88_RS26970
old locus tag: AMC88_PC00341
so part of: sequence
location: complement(384348..385241)
location: region:384348-385241:-1
so has part: feature:384348-385241:-1:exon
subclass of: SO_0000010

45960649
type: Gene
SIO_000068: ncbigene

position:384348:-1
position: 384348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385241:-1
position: 385241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384348-385241:-1:exon

AMC88_RS26970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifH
locus tag: AMC88_RS26970
old locus tag: AMC88_PC00341
EC number: 1.18.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004675840.1
GO component: GO:0016611 - iron-iron nitrogenase complex [Evidence IEA]; GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]; GO:0016613 - vanadium-iron nitrogenase complex [Evidence IEA]
GO function: GO:0016163 - nitrogenase activity [Evidence IEA]
GO process: GO:0009399 - nitrogen fixation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrogenase iron protein
translation: MSDLRQIAFYGKGGIGKSTTSQNTLAALVDLGQKILIVGCDPKADSTRLILNAKAQDTVLHLAAQEGSVEDLELEDVLKAGYKGIKCVESGGPEPGVGCAGRGVITSINFLEENGAYDDVDYVSYDVLGDVVCGGFAMPIRENKAQEIYIVMSGEMMALYAANNIAKGILKYAHSGGVRLGGLICNERQTDRELDLSEALAARLNSKLIHFVPRDNIVQHAELRKMTVIQYAPDSKQAGEYRALAEKIHANSGQGTIPTPITMEELEDMLLDFGIMKSDEQMLAELQAKESAVVAAQ
SIO_010081: AMC88_RS26970
subclass of: SO_0000673
so part of: AMC88_RS26970
location: complement(384348..385241)
location: region:384348-385241:-1
so has part: feature:384348-385241:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:384348-385241:-1:exon

AMC88_RS32675
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32675
pseudo: true
so part of: sequence
location: complement(385492..386435)
location: region:385492-386435:-1
so has part: feature:385492-386435:-1:exon
subclass of: SO_0000010

45961668
type: Gene
SIO_000068: ncbigene

position:385492:-1
position: 385492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386435:-1
position: 386435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385492-386435:-1:exon

AMC88_RS32675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611363.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS630 family transposase
SIO_010081: AMC88_RS32675
subclass of: SO_0000673
so part of: AMC88_RS32675
location: complement(385492..386435)
location: region:385492-386435:-1
so has part: feature:385492-386435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:385492-386435:-1:exon

AMC88_RS33805
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33805
pseudo: true
so part of: sequence
location: 386666..387124
location: region:386666-387124:1
so has part: feature:386666-387124:1:exon
subclass of: SO_0000010

45961817
type: Gene
SIO_000068: ncbigene

position:386666:1
position: 386666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387124:1
position: 387124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386666-387124:1:exon

AMC88_RS33805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012556676.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: GDP-mannose 4,6-dehydratase
SIO_010081: AMC88_RS33805
subclass of: SO_0000673
so part of: AMC88_RS33805
location: 386666..387124
location: region:386666-387124:1
so has part: feature:386666-387124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386666-387124:1:exon

AMC88_RS26990
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nodA
locus tag: AMC88_RS26990
old locus tag: AMC88_PC00345
so part of: sequence
location: complement(387535..388122)
location: region:387535-388122:-1
so has part: feature:387535-388122:-1:exon
subclass of: SO_0000010

45960650
type: Gene
SIO_000068: ncbigene

position:387535:-1
position: 387535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388122:-1
position: 388122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387535-388122:-1:exon

AMC88_RS26990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nodA
locus tag: AMC88_RS26990
old locus tag: AMC88_PC00345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004679687.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation N-acyltransferase NodA
translation: MSPQVRWKVCWENELELSDHTELADFFRKTYGPTGAYNALPFEGARSWSGARPELRVIGYDAHGVAAHMGLLRRFVRVGEVDLLVCELGLWGVRPDLEGYGINSMRIVYPVLQQLGVRFAFGGVRQALRNLVLRLCRNGLATVLEGVRVRSTLADVYLNLPPTRCENVILVVFPIGCSMSDWPSGTLIERNGPEL
SIO_010081: AMC88_RS26990
subclass of: SO_0000673
so part of: AMC88_RS26990
location: complement(387535..388122)
location: region:387535-388122:-1
so has part: feature:387535-388122:-1:exon

WP_004679687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387535-388122:-1:exon

AMC88_RS34275
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34275
pseudo: true
so part of: sequence
location: 388787..>388995
location: region:388787-388995:1
so has part: feature:388787-388995:1:exon
subclass of: SO_0000010

70363089
type: Gene
SIO_000068: ncbigene

position:388787:1
position: 388787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388995:1
position: 388995
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388787-388995:1:exon

AMC88_RS34275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018098906.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: insulinase family protein
SIO_010081: AMC88_RS34275
subclass of: SO_0000673
so part of: AMC88_RS34275
location: 388787..>388995
location: region:388787-388995:1
so has part: feature:388787-388995:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:388787-388995:1:exon

AMC88_RS26995
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS26995
so part of: sequence
location: 389060..389974
location: region:389060-389974:1
so has part: feature:389060-389974:1:exon
subclass of: SO_0000010

45960651
type: Gene
SIO_000068: ncbigene

position:389060:1
position: 389060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389974:1
position: 389974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389060-389974:1:exon

AMC88_RS26995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS26995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010034735.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMDVCSMGMVLCGGYLLAASAGRLGGAENVLSDSPLSAADVSSFETFIVRSPPTSLNLDPFYAKYADAAGIPIISSNKVPDTALLISRDIVLYMLSERRDVRDALIQAGARVGVMAIDETTTDIPEQRDWKKPLPDDPRLTPDERRDYANTIGKMTARDYWAQRARGMGGLYTTGAVENLMGVPGTRYYGGNILVHEFSHNIFNALRTVDPDLVARVERAYSHAYEKGLWACSYMENNVDEYWAEGTRFWFNTNLAYSRGNLTIATSEDFEAHDPSLYNIMAEVYRHDHHILADVYYRHSAKSQ
SIO_010081: AMC88_RS26995
subclass of: SO_0000673
so part of: AMC88_RS26995
location: 389060..389974
location: region:389060-389974:1
so has part: feature:389060-389974:1:exon

WP_010034735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389060-389974:1:exon

AMC88_RS27000
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27000
old locus tag: AMC88_PC00347
pseudo: true
so part of: sequence
location: complement(390275..>390934)
location: region:390275-390934:-1
so has part: feature:390275-390934:-1:exon
subclass of: SO_0000010

45960652
type: Gene
SIO_000068: ncbigene

position:390275:-1
position: 390275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390934:-1
position: 390934
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390275-390934:-1:exon

AMC88_RS27000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27000
old locus tag: AMC88_PC00347
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611444.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3-like element ISRel21 family transposase
SIO_010081: AMC88_RS27000
subclass of: SO_0000673
so part of: AMC88_RS27000
location: complement(390275..>390934)
location: region:390275-390934:-1
so has part: feature:390275-390934:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:390275-390934:-1:exon

AMC88_RS27005
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27005
old locus tag: AMC88_PC00348
so part of: sequence
location: 391014..391424
location: region:391014-391424:1
so has part: feature:391014-391424:1:exon
subclass of: SO_0000010

45960653
type: Gene
SIO_000068: ncbigene

position:391014:1
position: 391014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391424:1
position: 391424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391014-391424:1:exon

AMC88_RS27005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27005
old locus tag: AMC88_PC00348
inference: COORDINATES: protein motif:HMM:NF013677.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTKHPIEVITSVERRRRWSREDKERLVAACFEPDAVLSEIARAAGIHVSQLFRWRKELCQIEEPKTETASTLVPVILSEAAPPATPIPSGPPAPSQSRRKRSDVTIELGRGRRIRVDSDIDTEALGRILDVVLERR
SIO_010081: AMC88_RS27005
subclass of: SO_0000673
so part of: AMC88_RS27005
location: 391014..391424
location: region:391014-391424:1
so has part: feature:391014-391424:1:exon

WP_029875829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391014-391424:1:exon

AMC88_RS27010
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: tnpB
locus tag: AMC88_RS27010
old locus tag: AMC88_PC00349
so part of: sequence
location: 391421..391768
location: region:391421-391768:1
so has part: feature:391421-391768:1:exon
subclass of: SO_0000010

45960654
type: Gene
SIO_000068: ncbigene

position:391421:1
position: 391421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391768:1
position: 391768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391421-391768:1:exon

AMC88_RS27010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: tnpB
locus tag: AMC88_RS27010
old locus tag: AMC88_PC00349
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIPVPSGVKVWLATGHTDMRKGFPGLSLMVQETLKRDPMCGHLFVFRGRGGGLIKVIWHDGQGACLFTKKLERGRFVWPSAADGSVVITPAQLGYLLEGIDWRMPQKTWRPTSAG
SIO_010081: AMC88_RS27010
subclass of: SO_0000673
so part of: AMC88_RS27010
location: 391421..391768
location: region:391421-391768:1
so has part: feature:391421-391768:1:exon

WP_008536947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391421-391768:1:exon

AMC88_RS27015
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27015
old locus tag: AMC88_PC00350
so part of: sequence
location: 391814..393448
location: region:391814-393448:1
so has part: feature:391814-393448:1:exon
subclass of: SO_0000010

45960655
type: Gene
SIO_000068: ncbigene

position:391814:1
position: 391814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393448:1
position: 393448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391814-393448:1:exon

AMC88_RS27015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27015
old locus tag: AMC88_PC00350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_046205714.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MNDAAEQLPDDLASALALLAQERAWRMKAEAEAASAKALVSHSEALIARLKLEIEKVRRELYGSRSERKARLLEQMELQLEELEADAGEDELAAEIAAKASTVRAFERKRPSRKPFPEHLPRERVVIAAPTSCRCCGSARLSKLGEDITETLEVIPRQWKVIQTVREKFSCRECEKITQPPAPFHVTPRGFAGPNLLAMILFEKFAQHQPLNRQSERYGREGIDLSLSTLADQVGACAAALKPIHSLIEAHVLAAERLHGDDTTVPILAKGKTDTGRIWTYVRDDRPFSGQSPPAALYYASRDRRQEHPERHLKTFTGILQADAYGGYNPLFKVDRDPDPLTQALCWAHSRRKFFVLADIATNAKRGSRAMPISPLALEAVKRIDALFDIEREINGLAADERLQRRRIDSLSLVKELEDWMRTERAKLSRSSPVAEAIDYMLKRWDGFTSFLEDGRICLTNNAAERALRGFALGRKSWLFAGSDRGADRAAFMATLIMSAKLNDIDPQAWLADVLANIADTPTSKLEQLLPWNWTPTALDAQAA
SIO_010081: AMC88_RS27015
subclass of: SO_0000673
so part of: AMC88_RS27015
location: 391814..393448
location: region:391814-393448:1
so has part: feature:391814-393448:1:exon

WP_029875830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391814-393448:1:exon

AMC88_RS32690
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32690
pseudo: true
so part of: sequence
location: complement(<393475..393923)
location: region:393475-393923:-1
so has part: feature:393475-393923:-1:exon
subclass of: SO_0000010

45961669
type: Gene
SIO_000068: ncbigene

position:393475:-1
position: 393475
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:393923:-1
position: 393923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393475-393923:-1:exon

AMC88_RS32690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611442.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3-like element ISRel21 family transposase
SIO_010081: AMC88_RS32690
subclass of: SO_0000673
so part of: AMC88_RS32690
location: complement(<393475..393923)
location: region:393475-393923:-1
so has part: feature:393475-393923:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:393475-393923:-1:exon

AMC88_RS27025
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27025
old locus tag: AMC88_PC00352
so part of: sequence
location: 394687..395973
location: region:394687-395973:1
so has part: feature:394687-395973:1:exon
subclass of: SO_0000010

45960656
type: Gene
SIO_000068: ncbigene

position:394687:1
position: 394687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395973:1
position: 395973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394687-395973:1:exon

AMC88_RS27025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27025
old locus tag: AMC88_PC00352
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004677776.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SidA/IucD/PvdA family monooxygenase
translation: MQVLDLIGIGIGPFNLSLAALACPTPLRTAFFEKESGFDWHPGLLLPNSRLQVSPLKDCVTLADPTSPFSFLNYLAVHGRLYSFVNRCDATTSRREFTQYFQWVAHQLPQLRFGEEVTDVTRLDEGYRVTTTRDHYHARSVAIGVGVVATIPECAKPWLGEKVYHVASYLDRPQIDIGERVLVVGGGQSGAEVVEHLLGSPGIGKITWVTSRGNLFTRDDSSFINVSYTPSYSQRFHSLPLKKRRTIVDDEKLTSDGISAELSNRIYETIYHRSATGNIDDVIQLLPAVVMKELSPHADGWHALLASHGTCQRPTVVADRVVLATGFEPRPLAFIDRLLASASMEGGLPVVKDDYSVQFEDNAPGQVYLQNRSPVQSGLQSVNLSLVAYRNGRIINSLLRREYYLNVPDRPILGCLGLLPAQETQNAR
SIO_010081: AMC88_RS27025
subclass of: SO_0000673
so part of: AMC88_RS27025
location: 394687..395973
location: region:394687-395973:1
so has part: feature:394687-395973:1:exon

WP_010009012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394687-395973:1:exon

AMC88_RS27030
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27030
old locus tag: AMC88_PC00353
so part of: sequence
location: 396055..396834
location: region:396055-396834:1
so has part: feature:396055-396834:1:exon
subclass of: SO_0000010

45960657
type: Gene
SIO_000068: ncbigene

position:396055:1
position: 396055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396834:1
position: 396834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396055-396834:1:exon

AMC88_RS27030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27030
old locus tag: AMC88_PC00353
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016737344.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phytanoyl-CoA dioxygenase family protein
translation: MLTKEQKSTWDDVGYIRIESFLDLESRDKLSALVADVSCWETSEDKWLIWFEKTTVGRRIISKVENFLEFNAPVRDLLLADHRIESIVEELLGEDARMLKELLIFKYSDSGGYRPHQDIYHIPHKLPDRMVHAIVAIGIDDSGPDNGGLFFSPGNHKKGVFPMDAGGVMYPEVADRLAWEPVTWKAGDIFIFDDYAPHYSKPNKSENSRRVIYLVFQRASTGGPTRAEYNKLKRAYNPPEGKVSNIDELKPPNGIFYRD
SIO_010081: AMC88_RS27030
subclass of: SO_0000673
so part of: AMC88_RS27030
location: 396055..396834
location: region:396055-396834:1
so has part: feature:396055-396834:1:exon

WP_029875810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396055-396834:1:exon

AMC88_RS27035
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27035
old locus tag: AMC88_PC00354
so part of: sequence
location: 396856..397185
location: region:396856-397185:1
so has part: feature:396856-397185:1:exon
subclass of: SO_0000010

45960658
type: Gene
SIO_000068: ncbigene

position:396856:1
position: 396856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397185:1
position: 397185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396856-397185:1:exon

AMC88_RS27035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27035
old locus tag: AMC88_PC00354
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004677772.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MYTKQIDRSIMRQEYGVLVCRLLEHLPQAVATAFGTSIVEVVPGDAVDLHSHPEHELWVLISGSGVFQSDGETSAVSGDTMVYIAPHQKHAIKNSSPQTSLKFLSIWWD
SIO_010081: AMC88_RS27035
subclass of: SO_0000673
so part of: AMC88_RS27035
location: 396856..397185
location: region:396856-397185:1
so has part: feature:396856-397185:1:exon

WP_004677772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396856-397185:1:exon

AMC88_RS27040
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27040
old locus tag: AMC88_PC00355
so part of: sequence
location: 397187..398776
location: region:397187-398776:1
so has part: feature:397187-398776:1:exon
subclass of: SO_0000010

45960659
type: Gene
SIO_000068: ncbigene

position:397187:1
position: 397187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398776:1
position: 398776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397187-398776:1:exon

AMC88_RS27040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27040
old locus tag: AMC88_PC00355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053481.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I tRNA ligase family protein
translation: MRANQHTFFACSAPPCPNGKLHLGHIGGVYLLADVFVRYHRMVGNAAYHVTGADEHGTYTLVKARKLGRPVDDVAHMHIEEILQCLRSVDIEPDVFVRTSSEDHKDRSLAIYDQLRASGYVELRDGEQLYCGTCEEFAADSLAVGECPACNAPTDSNLCEDCGSALQHNLLRNPIHTTCGQSLILRPIRQVHFELEKFAPGLDHAIEASGWPESIKRKELDWLRSKLMALPMSRHFDRGVTLNSPVEVAGQTLMTWFEGLWCYETGIERLCKQNGADLDDTMRNASTRLVFFMGQDNRFYYTIGVTASLFSRGYAIPYNHAIQDFYKLEGAKFSTSRDHAVWADEVAADIDTNVLRYYLASIAKPFGANDNDFLIEGLLQTAARIRAFETALRKYAGCNETLTADKLTVEQNHNVKRYSEAVQDLRVWDAMDAIDAFFDVASFSRADTSVSAAEVSVFLSLLNPVTPMLAARYGAFFFGAGWRPGLDGGTIRPSTGLRKPVDFPLFSDPIPEAFIEAYERRFRQVRPNS
SIO_010081: AMC88_RS27040
subclass of: SO_0000673
so part of: AMC88_RS27040
location: 397187..398776
location: region:397187-398776:1
so has part: feature:397187-398776:1:exon

WP_011053481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397187-398776:1:exon

AMC88_RS33400
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33400
pseudo: true
so part of: sequence
location: complement(<398888..>399057)
location: region:398888-399057:-1
so has part: feature:398888-399057:-1:exon
subclass of: SO_0000010

45961744
type: Gene
SIO_000068: ncbigene

position:398888:-1
position: 398888
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:399057:-1
position: 399057
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398888-399057:-1:exon

AMC88_RS33400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611472.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: AMC88_RS33400
subclass of: SO_0000673
so part of: AMC88_RS33400
location: complement(<398888..>399057)
location: region:398888-399057:-1
so has part: feature:398888-399057:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:398888-399057:-1:exon

AMC88_RS27050
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nodD2
locus tag: AMC88_RS27050
old locus tag: AMC88_PC00356
so part of: sequence
location: 399442..400398
location: region:399442-400398:1
so has part: feature:399442-400398:1:exon
subclass of: SO_0000010

45960660
type: Gene
SIO_000068: ncbigene

position:399442:1
position: 399442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400398:1
position: 400398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399442-400398:1:exon

AMC88_RS27050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nodD2
locus tag: AMC88_RS27050
old locus tag: AMC88_PC00356
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004677768.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator NodD2
translation: MRFKGLDLNLLVALDALTTERNLTAAARSINLSQPAMSAAIGRLRDYFRDELFTMNGRELRLTPRAEGLASAVRETLLQVQCSIISWEPFNPSKSDRCFRIVLSDFMMLIYFNKIIERVAREAPAVSFELLPLDSDPYEMLSRGDVDFLIVPEFFLSGAHPSAKLFTEKFVCVACSTNVDLPSALTIEQYVSTGHVAAAFGRFLKPSVEGWFLLENGIQRRVEVVVQGFSLIPPVLRGTNRIANLPLRLVEHYESTFPLRIINLPLPLPVFTEAVQWPALHNADPGSIWFREILVEEASRMMSSNAPKIHGLLQQSGS
SIO_010081: AMC88_RS27050
subclass of: SO_0000673
so part of: AMC88_RS27050
location: 399442..400398
location: region:399442-400398:1
so has part: feature:399442-400398:1:exon

WP_004677768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399442-400398:1:exon

AMC88_RS27055
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nodD3
locus tag: AMC88_RS27055
old locus tag: AMC88_PC00357
so part of: sequence
location: complement(400806..401714)
location: region:400806-401714:-1
so has part: feature:400806-401714:-1:exon
subclass of: SO_0000010

45960661
type: Gene
SIO_000068: ncbigene

position:400806:-1
position: 400806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401714:-1
position: 401714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400806-401714:-1:exon

AMC88_RS27055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nodD3
locus tag: AMC88_RS27055
old locus tag: AMC88_PC00357
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004677763.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator NodD3
translation: MRFKGLDLNLLVALDALMIERNLTAAARSINLSQPAMSAAVRRLRSYFRDELFTMRGREFVPTPRAEDLAPAIREALQHIRLNIIPWDKFTPDQSDRHFRVSLCDFVTVVLFQKILERLAREAPGISFDLLPLTDNPDELLRRGDVDFLISPPLFMSSAHPKIDLFQERLTCVGCSNNKQLEEALTAEEYSSMGHAVVRFGRTQQPTIEDCFLQEHGLKRRVEVVVSSFSMIPAALMGTDRIATVPLRLVGLFEDTIPLRMTAPPIALPTFTEAVQWPVLHDKDPANIWMRDIMVQEAARLP
SIO_010081: AMC88_RS27055
subclass of: SO_0000673
so part of: AMC88_RS27055
location: complement(400806..401714)
location: region:400806-401714:-1
so has part: feature:400806-401714:-1:exon

WP_004677763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400806-401714:-1:exon

AMC88_RS27060
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27060
old locus tag: AMC88_PC00358
so part of: sequence
location: complement(401866..402891)
location: region:401866-402891:-1
so has part: feature:401866-402891:-1:exon
subclass of: SO_0000010

45960662
type: Gene
SIO_000068: ncbigene

position:401866:-1
position: 401866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402891:-1
position: 402891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401866-402891:-1:exon

AMC88_RS27060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27060
old locus tag: AMC88_PC00358
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053483.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LLM class flavin-dependent oxidoreductase
translation: MTNSLPAKLMVGIFDHLDEDGREIGRQYEDRMKLAEVCDRLGFYGYHVAEHHCTPHGRGPSPNLFLASVAQRTQHLRLGPLVMLLNLYHPLRAFEEICMLDHLSGGRLELGMGRGSLPIEWSFFGIDEEVATSRYLEASEIVIQAMKEGAQALSYKGDHFELDKVPLMLRPHQRPQPPRWITTSRPEVARWAAENDTNLACGGPASAVRQITDAYRAHERRTAGGRKRAPFLGLVRMVVAGSTTKHAISLAAPAYQRWLRSFRFLYEINGIQTPQNLPPDFDAAVDCQLCVVGTAASVRQDLLDHVEEAGANYLLCQLAFGDLPLEASYYTATSVHSGVMA
SIO_010081: AMC88_RS27060
subclass of: SO_0000673
so part of: AMC88_RS27060
location: complement(401866..402891)
location: region:401866-402891:-1
so has part: feature:401866-402891:-1:exon

WP_011053483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401866-402891:-1:exon

AMC88_RS32705
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS32705
pseudo: true
so part of: sequence
location: 403792..>404536
location: region:403792-404536:1
so has part: feature:403792-404536:1:exon
subclass of: SO_0000010

45961671
type: Gene
SIO_000068: ncbigene

position:403792:1
position: 403792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404536:1
position: 404536
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403792-404536:1:exon

AMC88_RS32705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS32705
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611444.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AMC88_RS32705
subclass of: SO_0000673
so part of: AMC88_RS32705
location: 403792..>404536
location: region:403792-404536:1
so has part: feature:403792-404536:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:403792-404536:1:exon

AMC88_RS27075
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27075
so part of: sequence
location: complement(404692..405213)
location: region:404692-405213:-1
so has part: feature:404692-405213:-1:exon
subclass of: SO_0000010

45960663
type: Gene
SIO_000068: ncbigene

position:404692:-1
position: 404692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405213:-1
position: 405213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404692-405213:-1:exon

AMC88_RS27075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004677747.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YbaK/EbsC family protein
translation: MLDVHPNVLAELHQIGASTVRLWRYSEFATPITSPSDLASAIGVPVGRVAKTMIIAEQKANDVMRRSHPARHLCAVLLPSPSKIDMKAVAGTYGWKRAELAQKEQVLDLFGYPSGSVSPFGLQKIAVLIDTALFSYPTVVTGAGKVGVELEIDTSMLWKIGQPLQTRGRASQT
SIO_010081: AMC88_RS27075
subclass of: SO_0000673
so part of: AMC88_RS27075
location: complement(404692..405213)
location: region:404692-405213:-1
so has part: feature:404692-405213:-1:exon

WP_004677747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404692-405213:-1:exon

AMC88_RS27080
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27080
old locus tag: AMC88_PC00361
so part of: sequence
location: complement(405299..405994)
location: region:405299-405994:-1
so has part: feature:405299-405994:-1:exon
subclass of: SO_0000010

45960664
type: Gene
SIO_000068: ncbigene

position:405299:-1
position: 405299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405994:-1
position: 405994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405299-405994:-1:exon

AMC88_RS27080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27080
old locus tag: AMC88_PC00361
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004677746.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKEIWKDYSQPFGTIGPLMTVGEILEKNIDAGYNAYDEYANAALQKFARYASEFLSNPHPHLGRDGSVCPFVPEALTKGLLRVAASQAVAVDEIENDLARMLAVFSQMKPVKSFNDRTGDWIYKAIIIALPGIQDEGEIIRIGQLQKRLKPDFIQEGFMIGEFYPGCPEPGLHNRMFRPLDTTVPALAIRHITKYDAPFMLDSDKCLEAYFSIFGNEGRRRIRQLLERTA
SIO_010081: AMC88_RS27080
subclass of: SO_0000673
so part of: AMC88_RS27080
location: complement(405299..405994)
location: region:405299-405994:-1
so has part: feature:405299-405994:-1:exon

WP_004677746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405299-405994:-1:exon

AMC88_RS33810
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS33810
so part of: sequence
location: 406349..406891
location: region:406349-406891:1
so has part: feature:406349-406891:1:exon
subclass of: SO_0000010

45961818
type: Gene
SIO_000068: ncbigene

position:406349:1
position: 406349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406891:1
position: 406891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406349-406891:1:exon

AMC88_RS33810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS33810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012489593.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKTTRRKIYTPEQIDVGVKHKLEKIDSFLSDLFSENSEEKLFLRNILGLMLKVYHMDANNKPMTKMQACRYLPFKNQTVCQKYVEAAHLRGFIDITRDKTDKRRLIVVPKEPLVVYVNEYIADFLDDCRRAIDSAAQVATLPEEGMATASSSSIDKSPASSGAPVGSSQKRVDRKARKF
SIO_010081: AMC88_RS33810
subclass of: SO_0000673
so part of: AMC88_RS33810
location: 406349..406891
location: region:406349-406891:1
so has part: feature:406349-406891:1:exon

WP_029875808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406349-406891:1:exon

AMC88_RS27090
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27090
old locus tag: AMC88_PC00362
so part of: sequence
location: complement(407289..408391)
location: region:407289-408391:-1
so has part: feature:407289-408391:-1:exon
subclass of: SO_0000010

45960665
type: Gene
SIO_000068: ncbigene

position:407289:-1
position: 407289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408391:-1
position: 408391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407289-408391:-1:exon

AMC88_RS27090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27090
old locus tag: AMC88_PC00362
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611444.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3-like element ISRel21 family transposase
translation: MKASQFSDAQKAFILKQGDEGVSVAEICRKAGISQATYFNWKKKYAGMLPPEMKRLKQLEDENSRLKKIVADLTLDREMLQDVIRRKPLRPARKREMVKGMCCDWAISIRRACGALNFDRSTHHYTSRRADQAGLERRIREICEIRVRYGYRRVHVLLEREGWGTNIKRTYRIYRDLGLQLRNKTPKRGVKAKLREDRHMAVGPNDVWAMDFVHDQLATGKKLRVLTVVDTFSRYVPVLDPRHSYRGEDVVQTLERVCQKAGYPKTIRVDQGTEFVSRDLDLWAYSKGVTLDFSRPGKPTDNAFIEAFNGRFRAECLNQHWFLTLADAREKMEDWRRYYNEERPHGAIGNKVPISLVNSGGATSPPP
SIO_010081: AMC88_RS27090
subclass of: SO_0000673
so part of: AMC88_RS27090
location: complement(join(407289..408130,408130..408391))
location: region:407289-408391:-1
so has part: feature:408130-408391:-1:exon
so has part: feature:407289-408130:-1:exon

WP_085994809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408130-408391:-1:exon

position:408130:-1
position: 408130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:407289-408130:-1:exon

AMC88_RS34280
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34280
pseudo: true
so part of: sequence
location: <409217..>409479
location: region:409217-409479:1
so has part: feature:409217-409479:1:exon
subclass of: SO_0000010

70363090
type: Gene
SIO_000068: ncbigene

position:409217:1
position: 409217
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:409479:1
position: 409479
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409217-409479:1:exon

AMC88_RS34280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558111.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: AMC88_RS34280
subclass of: SO_0000673
so part of: AMC88_RS34280
location: <409217..>409479
location: region:409217-409479:1
so has part: feature:409217-409479:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:409217-409479:1:exon

AMC88_RS34545
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34545
so part of: sequence
location: 409942..410067
location: region:409942-410067:1
so has part: feature:409942-410067:1:exon
subclass of: SO_0000010

74309082
type: Gene
SIO_000068: ncbigene

position:409942:1
position: 409942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410067:1
position: 410067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409942-410067:1:exon

AMC88_RS34545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34545
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMNNMAAYRVTELTPQEAAETSGGWYFWVYLFLRRYGHLFG
SIO_010081: AMC88_RS34545
subclass of: SO_0000673
so part of: AMC88_RS34545
location: 409942..410067
location: region:409942-410067:1
so has part: feature:409942-410067:1:exon

WP_004676277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409942-410067:1:exon

AMC88_RS27105
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27105
old locus tag: AMC88_PC00365
so part of: sequence
location: 410182..411267
location: region:410182-411267:1
so has part: feature:410182-411267:1:exon
subclass of: SO_0000010

45960666
type: Gene
SIO_000068: ncbigene

position:410182:1
position: 410182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411267:1
position: 411267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410182-411267:1:exon

AMC88_RS27105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27105
old locus tag: AMC88_PC00365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008533948.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HlyD family efflux transporter periplasmic adaptor subunit
translation: MSIYRAILLFVAAAFGSLPLVTIPVSMQSVGTIRPIVEKTPLIAPVSGRISRVLAFENDVVAKGKEIIAFDDHVIEEKLSGVLADIHAKSDLAHDFQTLISSGARLSVSPPLQTESATAERVHFLNLLRENQNARSNAAAELDRAKRLVSAAAAPAKTVDEKAFALQNIEVQGEILVRRKTADWNQKLLDANLRLKELTATLHQLEHERDLHRIRAPVSGALEQFSGLAHGSYVQSGQTVGWISPNDDLVAEIYVSPNDIGFVQPGQPVRLQVDAFNYNQWGVIKARVVEVAQDFTLHDGNPVFKVQCALSRSELALKSGAIGHLKKGMTVRARFLLANRTLLQLLYDEADDWLNPMLAGR
SIO_010081: AMC88_RS27105
subclass of: SO_0000673
so part of: AMC88_RS27105
location: 410182..411267
location: region:410182-411267:1
so has part: feature:410182-411267:1:exon

WP_008533948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410182-411267:1:exon

AMC88_RS27110
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27110
old locus tag: AMC88_PC00366
so part of: sequence
location: 411295..413442
location: region:411295-413442:1
so has part: feature:411295-413442:1:exon
subclass of: SO_0000010

45960667
type: Gene
SIO_000068: ncbigene

position:411295:1
position: 411295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413442:1
position: 413442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411295-413442:1:exon

AMC88_RS27110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27110
old locus tag: AMC88_PC00366
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004676279.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidase domain-containing ABC transporter
translation: MSSKAIKFKQRDITDCGAASLASVAAFYGYKLPLARIRQYASTDRSGTSVLGLTEAAQKLGFIAKGVKGGFDSLYKIPKPAIAHVVKEDLHHFVVVHAIDAKWVIVMDPALGEICKVPHQEFMEQWTGVLVLLVPADTFNRRDETTSPLARFARLLAPHRTVMAQALVGALVTTVLSLSTAIYVQKIVDHVIPAGNRNLLNLMSIAMLLILAIQILINLLRGRLVLQTGQKIDVCLILGYYNHILALPQKFFDSMRMGEIVSRMNDAVKIRSFLNDVSINMFVDILMILFSFGMMFIYSWNIALIVALAIPMYILVYWAINRMNRNLQRVIMENDAKLEAQLVESLGAVSTIKTSGVESFANFKMETRFVKMLHSVYSSGLISICGDNASTLLSVLFTIVLMWFGTTLALEQAVTPGELLSCYTLLGYITRPVARLIQTNRIVQDAFIAADRLFEIFELESASSSGIDATKTDLGDIRLENVTFRYGAQAEVFSDLSVSFRQGELTAVVGESGSGKSTLAALLQNVYQLEDGCIRIGQYALQDFSSASLHKVMAAVPQSIDVFSGSVIENIALGEFEPEFDKIVRICDRIGLRECIERWPGRFQAHLGENGVRLSGGEKQRLALARALYRDPDVLILDEATSSLDSAAEEFVLRVVEDLSRAGKTIIVITHRLSTVRGADNIVVLDRGRVIEEGKHADLVRTDGPYARLWRAPRS
SIO_010081: AMC88_RS27110
subclass of: SO_0000673
so part of: AMC88_RS27110
location: 411295..413442
location: region:411295-413442:1
so has part: feature:411295-413442:1:exon

WP_064820040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411295-413442:1:exon

AMC88_RS27115
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27115
old locus tag: AMC88_PC00367
pseudo: true
so part of: sequence
location: <413551..414033
location: region:413551-414033:1
so has part: feature:413551-414033:1:exon
subclass of: SO_0000010

45960668
type: Gene
SIO_000068: ncbigene

position:413551:1
position: 413551
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:414033:1
position: 414033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413551-414033:1:exon

AMC88_RS27115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27115
old locus tag: AMC88_PC00367
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611444.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3-like element ISRel21 family transposase
SIO_010081: AMC88_RS27115
subclass of: SO_0000673
so part of: AMC88_RS27115
location: <413551..414033
location: region:413551-414033:1
so has part: feature:413551-414033:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:413551-414033:1:exon

AMC88_RS27120
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27120
old locus tag: AMC88_PC00368
so part of: sequence
location: 414489..414875
location: region:414489-414875:1
so has part: feature:414489-414875:1:exon
subclass of: SO_0000010

45960669
type: Gene
SIO_000068: ncbigene

position:414489:1
position: 414489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414875:1
position: 414875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414489-414875:1:exon

AMC88_RS27120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27120
old locus tag: AMC88_PC00368
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009820057.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: METTIEFLTTKKSGRDMHRHWPDEVKAQIVSESLRPGAMVNEVAERHGLKPNHLSTWRTMARQGKLVLPAPEDAVEFAAVIVDPPVSEPPIKKASRPEIIVGAVTIRLEEGASATRIAAVARALAVPA
SIO_010081: AMC88_RS27120
subclass of: SO_0000673
so part of: AMC88_RS27120
location: 414489..414875
location: region:414489-414875:1
so has part: feature:414489-414875:1:exon

WP_037174792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414489-414875:1:exon

AMC88_RS27125
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: tnpB
locus tag: AMC88_RS27125
old locus tag: AMC88_PC00369
so part of: sequence
location: 414872..415225
location: region:414872-415225:1
so has part: feature:414872-415225:1:exon
subclass of: SO_0000010

45960670
type: Gene
SIO_000068: ncbigene

position:414872:1
position: 414872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415225:1
position: 415225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414872-415225:1:exon

AMC88_RS27125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: tnpB
locus tag: AMC88_RS27125
old locus tag: AMC88_PC00369
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011970376.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIFPSNRVRIMVATKPVDFRKGHDGLAALVKNELHKDPFTGTVFVFRSRKVDRLKLIYWDGSGLVMAYKRLEEHTFTWPDIRDGLMTLGPAQFEALFAGLDWRRVRSIEARAPNAIE
SIO_010081: AMC88_RS27125
subclass of: SO_0000673
so part of: AMC88_RS27125
location: 414872..415225
location: region:414872-415225:1
so has part: feature:414872-415225:1:exon

WP_009987304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414872-415225:1:exon

AMC88_RS27130
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27130
old locus tag: AMC88_PC00370
so part of: sequence
location: 415294..416823
location: region:415294-416823:1
so has part: feature:415294-416823:1:exon
subclass of: SO_0000010

45960671
type: Gene
SIO_000068: ncbigene

position:415294:1
position: 415294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416823:1
position: 416823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415294-416823:1:exon

AMC88_RS27130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27130
old locus tag: AMC88_PC00370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612405.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MLDAADLPDDIAALKAMLIAAQAREVRKDDRIERLEKLVAAFKQVAFGRKSEKADPEQFDLALEDLETAIAAVHAEDEADSPSGNPHPKPRAANRGSLPAHLPRVEEIIEPESLICPCGGGLHCIGEDVSERLDVVPAQYHVIVTRRPKYACRSCSDGVSQVPAPARLIHAGLPTEATIAHVLVSKYADHLPLYRQAQIMSRQGIDLDRSTLADWVGRAAFELRPVFDALIADLKRSTKLFMDETRAPVLDPGSRKTKTGYFWALARDDRPWGGGAPPGVAFTYAPSRGGLHAERILQGFTGILQVDGYAGYNRLIAPDRVGPDIRLAYCWAHARRKLVEITRTGSAPIAEEGVRRIGELYRIEAELRGLPAEARLAGRQERSAPLIADMRSWLTQHRVAGKSPLGEALAYIAKYWDGLCRFLADGRIEIDNNSVERTIRPIALNRKNALFAGHDAGAENWATIASLIETCKLNAVDPFAYLTNTLTAIVNGHKQRQIESILPWNHPAG
SIO_010081: AMC88_RS27130
subclass of: SO_0000673
so part of: AMC88_RS27130
location: 415294..416823
location: region:415294-416823:1
so has part: feature:415294-416823:1:exon

WP_008533971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415294-416823:1:exon

AMC88_RS27135
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27135
so part of: sequence
location: 416902..417366
location: region:416902-417366:1
so has part: feature:416902-417366:1:exon
subclass of: SO_0000010

45960672
type: Gene
SIO_000068: ncbigene

position:416902:1
position: 416902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417366:1
position: 417366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416902-417366:1:exon

AMC88_RS27135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017990650.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Imm26 family immunity protein
translation: MVRGRKQKRGDIVRIDIGNGKRFHAVALTHPLFAFLDGVFESEEPVQDVRDRAVLFKLWVMDSAAKSGRWPIVGKVDPPTVSALDGAVFFKQDRISGRISAYDAIENAESPLSFEEADRLECAAVWSPEHVEDRLRDHLNGISNKWWASMRPRK
SIO_010081: AMC88_RS27135
subclass of: SO_0000673
so part of: AMC88_RS27135
location: 416902..417366
location: region:416902-417366:1
so has part: feature:416902-417366:1:exon

WP_008533972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416902-417366:1:exon

AMC88_RS27140
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27140
old locus tag: AMC88_PC00371
so part of: sequence
location: complement(417482..417967)
location: region:417482-417967:-1
so has part: feature:417482-417967:-1:exon
subclass of: SO_0000010

45960673
type: Gene
SIO_000068: ncbigene

position:417482:-1
position: 417482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417967:-1
position: 417967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417482-417967:-1:exon

AMC88_RS27140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27140
old locus tag: AMC88_PC00371
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007635973.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NifX-associated nitrogen fixation protein
translation: MSNVTPVPNNARLDEKDALATPFIKCLLRLMRAQDTFELWQEKSDTDLLCDFIVTRQQRRAIPLIGGPDLEVQWRLEIFYAAVALAIEEQSGLMASPVLTVNHEGFGRILLTAGRLVVLSKTLRDVHRFGFDNLQKLAEAGTGLVDNGLTTIKTYSDVARV
SIO_010081: AMC88_RS27140
subclass of: SO_0000673
so part of: AMC88_RS27140
location: complement(417482..417967)
location: region:417482-417967:-1
so has part: feature:417482-417967:-1:exon

WP_004677039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417482-417967:-1:exon

AMC88_RS34285
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: nifH
locus tag: AMC88_RS34285
pseudo: true
so part of: sequence
location: complement(<418249..418394)
location: region:418249-418394:-1
so has part: feature:418249-418394:-1:exon
subclass of: SO_0000010

70363091
type: Gene
SIO_000068: ncbigene

position:418249:-1
position: 418249
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:418394:-1
position: 418394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418249-418394:-1:exon

AMC88_RS34285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: nifH
locus tag: AMC88_RS34285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007636849.1
note: nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nitrogenase reductase
SIO_010081: AMC88_RS34285
subclass of: SO_0000673
so part of: AMC88_RS34285
location: complement(<418249..418394)
location: region:418249-418394:-1
so has part: feature:418249-418394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:418249-418394:-1:exon

AMC88_RS27145
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27145
old locus tag: AMC88_PC00373
so part of: sequence
location: complement(419646..420824)
location: region:419646-420824:-1
so has part: feature:419646-420824:-1:exon
subclass of: SO_0000010

45960674
type: Gene
SIO_000068: ncbigene

position:419646:-1
position: 419646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420824:-1
position: 420824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419646-420824:-1:exon

AMC88_RS27145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27145
old locus tag: AMC88_PC00373
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018247121.1
GO function: GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase family protein
translation: MMNERLENAAFKGSRRHREMLRMRARIVGGKTVPEAPEADDRDLALDFAKGILIVLVIFGHLIQYIFYEGDGFWDSACFKSIYMFHMPLFMAISGYLSRSGLLGKSFRQAIGDRALQLLVPTLFWCTLLEAVKLLMFPRPPDAPGNLLQFMHDFVGTYWFIWAAFASFLLVKLISIFNSGSARSLLVSSILVAVAPVTFSIFPLIKYTYPFFCMGFSFAQSRDWWTSIMRYHKPLLMMSASIAASLCFMAWREDTYVYNNLALIQDLQSAKDILLMFFGSTVASAVMIEILLQSWKIGRSNRVVRFIAVEVGQSTLVLYLVQATVFRLMDLIQYGEQWAPTMRSGAAGILGTMIIAVALAVRWSVRDIPYLSQLMLGTPPRLVRLPSNPANN
SIO_010081: AMC88_RS27145
subclass of: SO_0000673
so part of: AMC88_RS27145
location: complement(419646..420824)
location: region:419646-420824:-1
so has part: feature:419646-420824:-1:exon

WP_011053494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419646-420824:-1:exon

AMC88_RS27150
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27150
old locus tag: AMC88_PC00374
so part of: sequence
location: complement(421632..422405)
location: region:421632-422405:-1
so has part: feature:421632-422405:-1:exon
subclass of: SO_0000010

45960675
type: Gene
SIO_000068: ncbigene

position:421632:-1
position: 421632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422405:-1
position: 422405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421632-422405:-1:exon

AMC88_RS27150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27150
old locus tag: AMC88_PC00374
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006206776.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015267 - channel activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aquaporin
translation: MKKYVCEFFGTFTLVFLGCGTLLYMRQEVGLLGVALAFGTTVVAMAYTIGPVSGAHLNPAVSLGFLVSRRLRVWDFLAYVSAQCAGAIAAAGTLYLIAMNKVGGYDITLEGFAQTGWVVYGWRAAFLFEFIATFLFVTVFLKCTAGRGAVARLAIGLALVAIHLGGITVSGSSVNPARSIGPALFAGGAALSQLWLYICAPMLGAIAAGLLQLRGIVASSEPQSLRQFESREMTSDISSPVSFFRHRRRGIPKRESH
SIO_010081: AMC88_RS27150
subclass of: SO_0000673
so part of: AMC88_RS27150
location: complement(421632..422405)
location: region:421632-422405:-1
so has part: feature:421632-422405:-1:exon

WP_004677031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421632-422405:-1:exon

AMC88_RS27155
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27155
old locus tag: AMC88_PC00375
so part of: sequence
location: 423301..423756
location: region:423301-423756:1
so has part: feature:423301-423756:1:exon
subclass of: SO_0000010

45960676
type: Gene
SIO_000068: ncbigene

position:423301:1
position: 423301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423756:1
position: 423756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423301-423756:1:exon

AMC88_RS27155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27155
old locus tag: AMC88_PC00375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010024976.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phasin
translation: MTKISERSFETIENPGSSSLKVPDQFGASVEKGNKQVTEALLKFASGAEATQKMLPPILETTSLFGNELWWKTIAALQADAEAGFSHLQALLGANSPSQILEQQSTFFRKRVETSLQHAKEVRELSSRAVEEISKPVKDAFDKVLTNPKAT
SIO_010081: AMC88_RS27155
subclass of: SO_0000673
so part of: AMC88_RS27155
location: 423301..423756
location: region:423301-423756:1
so has part: feature:423301-423756:1:exon

WP_010029250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423301-423756:1:exon

AMC88_RS27160
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27160
old locus tag: AMC88_PC00376
so part of: sequence
location: 424043..424597
location: region:424043-424597:1
so has part: feature:424043-424597:1:exon
subclass of: SO_0000010

45960677
type: Gene
SIO_000068: ncbigene

position:424043:1
position: 424043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424597:1
position: 424597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424043-424597:1:exon

AMC88_RS27160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27160
old locus tag: AMC88_PC00376
EC number: 2.4.2.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004672710.1
GO function: GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenine phosphoribosyltransferase
translation: MIVAVPNSGASRINQSGVEALREFPNFPIGGILFKDIAPMLAGRGALGEVVSTVASQVSGTEIDAILAVDARGFILGASLADRLGCGFIMVRKPGKLPGDVLSFEYSCEYCSGTLEVTAGLIGDGLRCLIADDLLATGGTARATGNFVKSQGGEIAGYAFILEIEVLKGRRQLDDAPVISAMTC
SIO_010081: AMC88_RS27160
subclass of: SO_0000673
so part of: AMC88_RS27160
location: 424043..424597
location: region:424043-424597:1
so has part: feature:424043-424597:1:exon

WP_004672710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424043-424597:1:exon

AMC88_RS27165
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27165
old locus tag: AMC88_PC00377
so part of: sequence
location: 424629..425897
location: region:424629-425897:1
so has part: feature:424629-425897:1:exon
subclass of: SO_0000010

45960678
type: Gene
SIO_000068: ncbigene

position:424629:1
position: 424629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425897:1
position: 425897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424629-425897:1:exon

AMC88_RS27165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27165
old locus tag: AMC88_PC00377
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004672712.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM protein
translation: MNTPDWLSTPQDVHVASQTLQALVTSELSKRVVSENEIKTIYLFLTRKCNLGCHHCYIAGVGPKAKGIDFNLEAIQGLIEQALPNGLRKVKVSGGEPMVHKEFMAVMEYLASCGLKELVFETNGTLFDEFTIEQLSRLPNLTVFISLDHFDPEAHDAFRAKSGAFAKTAIVLQRLGKTDISTVVTTTAYRNNYDKVISIIDLVLGWGIKKHRTLLNIHPMGNARSHEDNAISLEECKLLIGDLLKSPHFESGAAYMTLPPALMPLKYLNGVHTCGWGDNVLGILSNGQVSMCSASYDDPEMIAGNAFEMPLMEIWRNSPFFHELREVVSGEVKGVCGNCVFYPVCRGVCKMSSWSHYGEKDAPYPLCQELYNNGGFPEYALVDPTKDSTYRRGVIAKERRPAAEAPVYNFSEEIAAAAQHTH
SIO_010081: AMC88_RS27165
subclass of: SO_0000673
so part of: AMC88_RS27165
location: 424629..425897
location: region:424629-425897:1
so has part: feature:424629-425897:1:exon

WP_004672712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424629-425897:1:exon

AMC88_RS27170
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27170
old locus tag: AMC88_PC00378
so part of: sequence
location: 425978..426472
location: region:425978-426472:1
so has part: feature:425978-426472:1:exon
subclass of: SO_0000010

45960679
type: Gene
SIO_000068: ncbigene

position:425978:1
position: 425978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426472:1
position: 426472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425978-426472:1:exon

AMC88_RS27170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27170
old locus tag: AMC88_PC00378
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004672713.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRAFRGAAGVAHTLANNAIRSGNKAAAQQAQVISRLAEGLARLQAGLDDQAQQLTAGLVKLEQSLKVSRRSQRSKSGSLAANGELQDYYVDITASKKFGKANWPRAADSGLVGRRIGRGPVRMTGSDTQSAKAVTAAFAKLLSAQAQLLQIRSEVEDLKKVQR
SIO_010081: AMC88_RS27170
subclass of: SO_0000673
so part of: AMC88_RS27170
location: 425978..426472
location: region:425978-426472:1
so has part: feature:425978-426472:1:exon

WP_004672713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425978-426472:1:exon

AMC88_RS27175
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27175
old locus tag: AMC88_PC00379
so part of: sequence
location: 426478..426807
location: region:426478-426807:1
so has part: feature:426478-426807:1:exon
subclass of: SO_0000010

45960680
type: Gene
SIO_000068: ncbigene

position:426478:1
position: 426478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426807:1
position: 426807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426478-426807:1:exon

AMC88_RS27175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27175
old locus tag: AMC88_PC00379
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004672714.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASSRLFGYAVDEEDGKLVIVIDGLLAESCIRQIRDSAQTGRGGELLSRLLPVSSVYKLMSGQEERAEETLSLEQLLGQNVDQSFASFEQQFADLRQTLAEFGSPESSK
SIO_010081: AMC88_RS27175
subclass of: SO_0000673
so part of: AMC88_RS27175
location: 426478..426807
location: region:426478-426807:1
so has part: feature:426478-426807:1:exon

WP_004672714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426478-426807:1:exon

AMC88_RS27180
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS27180
old locus tag: AMC88_PC00380
so part of: sequence
location: 426837..427952
location: region:426837-427952:1
so has part: feature:426837-427952:1:exon
subclass of: SO_0000010

45960681
type: Gene
SIO_000068: ncbigene

position:426837:1
position: 426837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427952:1
position: 427952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426837-427952:1:exon

AMC88_RS27180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS27180
old locus tag: AMC88_PC00380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004672715.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase family protein
translation: MLRLSPEDSILLITCRAYLRPEDEERLVRLCKEPVNWPYVVWRAEHNRTVPLLENHLRRLDLLTLLPTEAAHYVQCWTVMSKVRSALEFRNLPEIMDALDRAGIAWFLVKGPDLALLHYPDPLLRPMTDLDIMVKPADAQRVQRLMFDLGYRHGIFDPSNGNWHPERKELDDETFRESYSLPVFVRIESVESPFPGPAVPRQLRYRHVKGYIDSAKKLHMPIFIDMHVNLSVGIDVEDIWSGVRLANGLGRILQVQSATGAVWFLSARLYHEAFLYNSLRLLMFGDLHAVLHKEMANISWAEVAAIGYKYEMRPALYFVLTQMKRICGIDIPSEFLELIRPDQTEVPLQHDWGDVLPKLLSIPTVNDLELA
SIO_010081: AMC88_RS27180
subclass of: SO_0000673
so part of: AMC88_RS27180
location: 426837..427952
location: region:426837-427952:1
so has part: feature:426837-427952:1:exon

WP_004672715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426837-427952:1:exon

AMC88_RS27185
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: prs
locus tag: AMC88_RS27185
old locus tag: AMC88_PC00381
so part of: sequence
location: 427955..428896
location: region:427955-428896:1
so has part: feature:427955-428896:1:exon
subclass of: SO_0000010

45960682
type: Gene
SIO_000068: ncbigene

position:427955:1
position: 427955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428896:1
position: 428896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427955-428896:1:exon

AMC88_RS27185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: prs
locus tag: AMC88_RS27185
old locus tag: AMC88_PC00381
EC number: 2.7.6.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053499.1
GO function: GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribose-phosphate diphosphokinase
translation: MTPESPYRTDPAANDLRIAATETSAKFASTVHRALTRSGITILNTQVFSNGQMAVTPRDGRLGGDVVVVQTFPDSVHDRLFELFLALGAVRARGPRTITAVLPYLPYSRSDRPAFDGGPVPVRILAGIIETLGIDRLITFELHVPQLCAAFACPVVNLQFAPALVRHLGSAAVDGDMVVSPDFGGAKRAEHLAALLGCPFAVMRKHRRDDDDFRESVEILGDVAGRTIILIDDEINSGQTAFSAAAHLKAAGARKITLAAAHAIFTPSLNENWGRSQIDRIVVTDSVGRTDNFPDSVEVVSIGNEIAGALQAR
SIO_010081: AMC88_RS27185
subclass of: SO_0000673
so part of: AMC88_RS27185
location: 427955..428896
location: region:427955-428896:1
so has part: feature:427955-428896:1:exon

WP_081279176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427955-428896:1:exon

AMC88_RS34550
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34550
old locus tag: AMC88_PC00382
so part of: sequence
location: complement(428903..429937)
location: region:428903-429937:-1
so has part: feature:428903-429937:-1:exon
subclass of: SO_0000010

74309083
type: Gene
SIO_000068: ncbigene

position:428903:-1
position: 428903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429937:-1
position: 429937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428903-429937:-1:exon

AMC88_RS34550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34550
old locus tag: AMC88_PC00382
inference: COORDINATES: protein motif:HMM:NF019845.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: medium chain dehydrogenase/reductase family protein
translation: MEVRGLVITCPRKVEEWTLSVPLAVSSEVGVRIELCGLCTPEQRVYRGAKPTYPYWGGHELSGTIASLPDDVPDGLRVGDRVAVLLMRRCGQCRACRLGLDNHCAYLNPKARGGVPQGPGGLANFVGVPAYQVFSVPSFLAPERAALVEPVACVARGINRARAKAGDTVAVIGGGTMGLLHSILLTTKGCDVYLFDDDVATHGPVMSTGAHATGSVHSLSDPKLVEKLTDGWGFDCIFCTRFGVRGIQGAIAAASRGARIVLYQSIPTSDLLSVGANFLHYREIELIGTIAQSADDVRNAIRTIVEHAARFDVLQVNLWPSSNAQEAFEQALDPRVNRVMLDFR
SIO_010081: AMC88_RS34550
subclass of: SO_0000673
so part of: AMC88_RS34550
location: complement(428903..429937)
location: region:428903-429937:-1
so has part: feature:428903-429937:-1:exon

WP_080771779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428903-429937:-1:exon

AMC88_RS34300
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34300
pseudo: true
so part of: sequence
location: complement(430452..>430594)
location: region:430452-430594:-1
so has part: feature:430452-430594:-1:exon
subclass of: SO_0000010

70363094
type: Gene
SIO_000068: ncbigene

position:430452:-1
position: 430452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430594:-1
position: 430594
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430452-430594:-1:exon

AMC88_RS34300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004129936.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: conjugal transfer protein TrbB
SIO_010081: AMC88_RS34300
subclass of: SO_0000673
so part of: AMC88_RS34300
location: complement(430452..>430594)
location: region:430452-430594:-1
so has part: feature:430452-430594:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430452-430594:-1:exon

AMC88_RS34305
type: Gene
subclass of: SO_0000704
RO_0002162: 396
locus tag: AMC88_RS34305
so part of: sequence
location: complement(431002..431091)
location: region:431002-431091:-1
so has part: feature:431002-431091:-1:exon
subclass of: SO_0000010

70363095
type: Gene
SIO_000068: ncbigene

position:431002:-1
position: 431002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431091:-1
position: 431091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431002-431091:-1:exon

AMC88_RS34305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
locus tag: AMC88_RS34305
inference: COORDINATES: protein motif:HMM:NF012967.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAMGPTMLVDVFPSLFPKGRLNANPLMV
SIO_010081: AMC88_RS34305
subclass of: SO_0000673
so part of: AMC88_RS34305
location: complement(431002..431091)
location: region:431002-431091:-1
so has part: feature:431002-431091:-1:exon

WP_225884159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431002-431091:-1:exon

AMC88_RS27200
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: repA
locus tag: AMC88_RS27200
old locus tag: AMC88_PC00383
so part of: sequence
location: 431686..432900
location: region:431686-432900:1
so has part: feature:431686-432900:1:exon
subclass of: SO_0000010

45960683
type: Gene
SIO_000068: ncbigene

position:431686:1
position: 431686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432900:1
position: 432900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431686-432900:1:exon

AMC88_RS27200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: repA
locus tag: AMC88_RS27200
old locus tag: AMC88_PC00383
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007538730.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepA
translation: MAKTAAKTAPVVEGLTALMERHADALSSQLQAHHLKVFPPTSEKGIRSFAPSEASKLLGIGESYLRQTASEMPELHVSMSPGGRRTFTIEDIHSIRKHLDLIGRGNRRYLPHRRTGEQLQVVSVMNFKGGSGKTTTAAHLAQYLAMRGYRILAIDLDPQASLSALFGSQPETDVGPNETLYGAIRYDDEQVPIEQVVRGTYIPDLHLIPGNLELMEFEHDTPRALMNRKEGDTLFYGRISQVIEDIADNYDVVVIDCPPQLGYLTLSALTAATSILVTVHPQMLDVMSMNQFLAMTSNLLREIENAGAQFKFNWMRYLVTRFEPSDGPQNQMVGYLRSIFGENVLNFPMLKTTAVSDAGLTNQTLFEVERGQFTRSTYDRALEAMNAVNDEIETLIKKAWGRTT
SIO_010081: AMC88_RS27200
subclass of: SO_0000673
so part of: AMC88_RS27200
location: 431686..432900
location: region:431686-432900:1
so has part: feature:431686-432900:1:exon

WP_008534005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431686-432900:1:exon

AMC88_RS27205
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: repB
locus tag: AMC88_RS27205
old locus tag: AMC88_PC00384
so part of: sequence
location: 432897..433922
location: region:432897-433922:1
so has part: feature:432897-433922:1:exon
subclass of: SO_0000010

45960684
type: Gene
SIO_000068: ncbigene

position:432897:1
position: 432897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433922:1
position: 433922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432897-433922:1:exon

AMC88_RS27205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: repB
locus tag: AMC88_RS27205
old locus tag: AMC88_PC00384
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004672729.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partitioning protein RepB
translation: MSRKHLLDVTTDAPDSSSAAEHRAAKTRSMPLLGVTRKERDPATKLTANIGNALREQNDRLGRAEEIERRLAEGQAVVELNASSIEPSFVQDRMQGDIEGLLASIREQGQQVPILVRPHPVKPARYQVAFGHRRLRAVSELGLPVKAVVRDLTDEQLVVAQGQENNEREDLTFIEKARFAHKLNKQFPREIVIAAMSIDKSNLSKMLLLVDALPSELIDAIGAAPGVGRPSWQQLAELVEKASPPAGAAKYAASEEVQALPSSERFKAVIDHLKPRRTARGLPDVLSTPDGDRLAQVTQSKSKLEITIDRKATPDFAAFVLEHLPALYQEHRAKHQRKQGV
SIO_010081: AMC88_RS27205
subclass of: SO_0000673
so part of: AMC88_RS27205
location: 432897..433922
location: region:432897-433922:1
so has part: feature:432897-433922:1:exon

WP_040111913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432897-433922:1:exon

AMC88_RS27210
type: Gene
subclass of: SO_0000704
RO_0002162: 396
gene: repC
locus tag: AMC88_RS27210
old locus tag: AMC88_PC00386
so part of: sequence
location: 434078..435286
location: region:434078-435286:1
so has part: feature:434078-435286:1:exon
subclass of: SO_0000010

45960685
type: Gene
SIO_000068: ncbigene

position:434078:1
position: 434078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434078-435286:1:exon

AMC88_RS27210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 396
gene: repC
locus tag: AMC88_RS27210
old locus tag: AMC88_PC00386
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004672730.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: MQSGNVATPFGRRPMTLALVRRQAAMEIKHGKAADKWKVLRDASAAMELLGIQSNSLAVLDALLSFYPDNELRQDAQLIVFPSNAQLALRAHAMAGATLRRHIAILVESGLIVRKDSANGKRFARKGDDGQIENAFGFDLSPLLARSEELAMLAQRVAAERASLRKAKESLTICRRDVRKLITAAMVEGADGDWKTTEDIYVALVSRIPRVPTLEGVTSVLNEMVMLREEVLNRLESLENAEKISTNAAHIEQHIQNSKPESINESEPRSEKEQGAKASLSHQPKNESQRAFPLGLVLKACPMISDYAPRGVGSWRDLMSAAVVVRSMLGVSPSAYQDACEALGPENAAVAIACILERANLINSPGGYLRDLTRRSERGEFSLGPMIMALLKANGQGGLRAG
SIO_010081: AMC88_RS27210
subclass of: SO_0000673
so part of: AMC88_RS27210
location: 434078..435286
location: region:434078-435286:1
so has part: feature:434078-435286:1:exon

WP_040111914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434078-435286:1:exon