Aquincola tertiaricarbonis strain RN12 plasmid A, complete sequence.
type: Entry
definition: Aquincola tertiaricarbonis strain RN12 plasmid A, complete sequence.
sequence version: NZ_CP097637.1
sequence date: 2022-09-04
sequence: sequence
division: CON
label: NZ_CP097637.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN27545081
keyword: RefSeq
source: Aquincola tertiaricarbonis
organism: Aquincola tertiaricarbonis
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Sphaerotilaceae; Aquincola.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP097637.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SOAPdenovo v. v.2.21\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 09/04/2022 14:37:31\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 6,604\nCDSs (total) :: 6,540\nGenes (coding) :: 6,400\nCDSs (with protein) :: 6,400\nGenes (RNA) :: 64\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 3\nPseudo Genes (total) :: 140\nCDSs (without protein) :: 140\nPseudo Genes (ambiguous residues) :: 0 of 140\nPseudo Genes (frameshifted) :: 25 of 140\nPseudo Genes (incomplete) :: 120 of 140\nPseudo Genes (internal stop) :: 18 of 140\nPseudo Genes (multiple problems) :: 19 of 140\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 32782
topology: circular
so has quality: SO_0000988
location: 1..32782
location: region:1-32782:1
RO_0002162: 391953

NZ_CP097637
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN27545081
type: BioSample
SIO_000068: biosample

1
title: An RpoN-dependent PEP-CTERM gene is involved in floc formation of an Aquincola tertiaricarbonis strain
author: Qiu, D.
author: Xia, M.
journal: Unpublished

2
title: Direct Submission
author: Qiu, D.
author: Xia, M.
journal: Submitted (19-MAY-2022) Institute of Hydrobiology, Chinese Academy of Sciences, Donghu South Road, Wuhan 430000, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32782:1
position: 32782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-32782:1:source
so part of: sequence
organism: Aquincola tertiaricarbonis
mol type: genomic DNA
strain: RN12
isolation source: water supply well
plasmid: A
country: China:Wuhan
collection date: 2022-03-03

391953
type: Taxonomy
SIO_000068: taxonomy

MW290_RS32145
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32145
old locus tag: MW290_32145
so part of: sequence
location: join(32713..32782,1..1163)
location: region:1-32782:1
so has part: feature:32713-32782:1:exon
so has part: feature:1-1163:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:32713-32782:1:exon

position:32713:1
position: 32713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-1163:1:exon

position:1163:1
position: 1163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MW290_RS32145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32145
old locus tag: MW290_32145
EC number: 3.1.21.-
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
translation: MFDLLMAQSSQSVEPPRIPGRFREPKPYLRNLNVRWFDFDLTNVLQMRFEASEAERYTVRKGDLVICEGGYPGRAAVWDFDEPVYFQKALHRVRFHDPGYARWCLYYLLYQDVIGQLRAHFNGAGIQHFTGEALAKFEIPVPPIDEACRLVALLDEAFEGIATAKANTEKSLQNAREWSARQLATALGAASVGGRSDTLEKLVAPSCTLSYGIVQPGEDVPDGLPVVRPVDLGDRNVYANSLKRIDPALARSYARTTLEGNDLLLCVRGTTGTVAVADPALAGANVTRGIVPIRFDPQTISQALGYYLLRSEPVQAQIRAKTYGTALMQINIGDLRKIVVAFPPLEEQAALVEKLDAIQEAADQLADVYARKLAALTELKHSLLHQAFTGGLSPQNDRPLRGHDLPLCTQ
SIO_010081: MW290_RS32145
subclass of: SO_0000673
so part of: MW290_RS32145
location: join(32713..32782,1..1163)
location: region:1-32782:1
so has part: feature:32713-32782:1:exon
so has part: feature:1-1163:1:exon

WP_250200170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32713-32782:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-1163:1:exon

MW290_RS32150
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32150
old locus tag: MW290_32150
so part of: sequence
location: 1211..1483
location: region:1211-1483:1
so has part: feature:1211-1483:1:exon
subclass of: SO_0000010

position:1211:1
position: 1211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1483:1
position: 1483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1211-1483:1:exon

MW290_RS32150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32150
old locus tag: MW290_32150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018444059.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system Phd/YefM family antitoxin
translation: METKSVGIREFRAGLAEFIDSKQPVAVTRHGQTVGIFIPTARPTQVDLQALRDAADKLEAVMSLSEDDVEAAVRDFDALRKGAARRRART
SIO_010081: MW290_RS32150
subclass of: SO_0000673
so part of: MW290_RS32150
location: 1211..1483
location: region:1211-1483:1
so has part: feature:1211-1483:1:exon

WP_250200171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1211-1483:1:exon

MW290_RS32155
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32155
old locus tag: MW290_32155
so part of: sequence
location: 1480..1932
location: region:1480-1932:1
so has part: feature:1480-1932:1:exon
subclass of: SO_0000010

position:1480:1
position: 1480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1932:1
position: 1932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1480-1932:1:exon

MW290_RS32155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32155
old locus tag: MW290_32155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006592333.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MTPRTIVLDANVLMRAVLGRRVDRLLERFASQVTFLAPEVAFEDVQEHLASVLTKRDELKALQPALEKLTKLRLVVRAVDPSEYELMKPAALARIGPRDPDDWPILACALAVNCPIWTEDRDFFGTGVATWTTALVELYLAGPDTESAEH
SIO_010081: MW290_RS32155
subclass of: SO_0000673
so part of: MW290_RS32155
location: 1480..1932
location: region:1480-1932:1
so has part: feature:1480-1932:1:exon

WP_250200172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1480-1932:1:exon

MW290_RS32160
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32160
old locus tag: MW290_32160
so part of: sequence
location: 1955..4375
location: region:1955-4375:1
so has part: feature:1955-4375:1:exon
subclass of: SO_0000010

position:1955:1
position: 1955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4375:1
position: 4375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1955-4375:1:exon

MW290_RS32160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32160
old locus tag: MW290_32160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013148478.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction endonuclease subunit R
translation: MNEAETRAEHIDPALRAAGWGVVDGSRIRREVIAPGRLQGKGQRTQADIADYVLIYRNTKLAVIEAKAWDKEYTEGLGQAKKYAAKLAVRFTYSTNGQAIYGVDMARGTEGDVARYPSPDELWAMTFADADPASATWRDRFAAVPFEDKGGTWQGRYYQDIAVSRVLEAIAAGRDRILLTLATGTGKTFIAFQLAWKLFQSRWNLNDWRGGTAPSRRPRVLFLADRNNLADQAYNAFSAFPEDALVRIDPDDIRKKGRVPKNGSIFFTIFQTFMSGRGPDGQPQPYFGEYPPDFFDFIVIDECHRGGARDESSWRAILEYFAPAVQLGLTATPKRTINADTYAYFGEPVYVYSLREGINDGYLTPFRVKQIATTLDEYVYTPDDDVVAGNIEPGRRYEEKDFNRIIKIMERETYRVQIFMNLIDQREKTIVFCASRLHALAVRNLVNQLKAPGPHTRDPLYCVRVTSSDGAIGDEHLRAFQDNEKTIPTILTTSQKLSTGVDARNVRNIVLMRPVASMIEFKQIIGRGTRLYEGKDHFTIYDFVRAHQHFSDPDWDGEPIAVGPPDPPEGRAPRASEADRGADPVTPRGTEPETPKPRPTPIEVKLADGKLRRVQHMIATTFWSADGRPMSAAQFLESLFGTLPAFFKDEDELRRLWSAPDTRKALLSGLADKGFGREALADMQRVIEAENSDLFDVLAYVAFAVDPVTRADRAAAASAATAAQLPDKQHAFVDFVLAQYVKQGVDELDAAKLSPLLRLRYRALSDAFAELGKPNQVRQVFVGVQQHLYDAAIKPKYRSQDPLTKR
SIO_010081: MW290_RS32160
subclass of: SO_0000673
so part of: MW290_RS32160
location: 1955..4375
location: region:1955-4375:1
so has part: feature:1955-4375:1:exon

WP_250200173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1955-4375:1:exon

MW290_RS32165
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32165
old locus tag: MW290_32165
so part of: sequence
location: 4699..5331
location: region:4699-5331:1
so has part: feature:4699-5331:1:exon
subclass of: SO_0000010

position:4699:1
position: 4699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5331:1
position: 5331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4699-5331:1:exon

MW290_RS32165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32165
old locus tag: MW290_32165
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQLNARIMRHCYAASVITIAALSSGCIEQTEPTLAKSTGSTLLPPGTYTLCTFHGSLFGEGRGKSCETLHAIATRHQNTLAVDQKYPIEIGGRNIVGVTFDAKFDEKSGLIEVEASGDADHSAYYYLGAITHVEEQKRWVVFITDCYRLKESPYFFEYKENNNLKNCSPKDDKSRKALHKFLIDEANRGGNFLDNKNFHVLIPIEQRRTR
SIO_010081: MW290_RS32165
subclass of: SO_0000673
so part of: MW290_RS32165
location: 4699..5331
location: region:4699-5331:1
so has part: feature:4699-5331:1:exon

WP_250200174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4699-5331:1:exon

MW290_RS32170
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32170
old locus tag: MW290_32170
so part of: sequence
location: 6025..7011
location: region:6025-7011:1
so has part: feature:6025-7011:1:exon
subclass of: SO_0000010

position:6025:1
position: 6025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7011:1
position: 7011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6025-7011:1:exon

MW290_RS32170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32170
old locus tag: MW290_32170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRTEEVESIVRLQFPLLFGEKELVTNTEFELAFNAIAEQGIKWAEPALKPETHKHQWTLVGTSIALYALVLFNVRKVQIGTASISVDRQVIIWYSVFAFALLLTFLLRASLDLKRAALAREKDSEKLEGLNNLVQAAWIRRNIEYHFFLELNSKIQGIYGVYDEARGLAIESKDYNINALNLDIEGLKKIPDYSKEIAAHEEFLAKMIKKVEKDCERFKNQLLEYESKISTRANATSNPEYDRWTKGRELFDSHLKPWFDAQNRLLNEHIAVLEGASMTREGIMLDAQKSVLTRARRIQHAYAFTEIALPSVLACGSVIYATSTVLK
SIO_010081: MW290_RS32170
subclass of: SO_0000673
so part of: MW290_RS32170
location: 6025..7011
location: region:6025-7011:1
so has part: feature:6025-7011:1:exon

WP_250200175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6025-7011:1:exon

MW290_RS32175
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32175
old locus tag: MW290_32175
so part of: sequence
location: 7724..8242
location: region:7724-8242:1
so has part: feature:7724-8242:1:exon
subclass of: SO_0000010

position:7724:1
position: 7724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8242:1
position: 8242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7724-8242:1:exon

MW290_RS32175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32175
old locus tag: MW290_32175
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARLKYILELLAAAATTLALPFGVYQLWQTNRTLALERANQAVSHFLGSDEMLELAKRIRSKTNGGTQYTADIMKDSELRGDVNNYLNNLEQIAYFTNKKLYDLELIQGQLANIIYKQANVHLLCNDGSLPGGEPWKTYSECSFRNANQFPELRKVYSAWFPHGKFVDYSDR
SIO_010081: MW290_RS32175
subclass of: SO_0000673
so part of: MW290_RS32175
location: 7724..8242
location: region:7724-8242:1
so has part: feature:7724-8242:1:exon

WP_250200176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7724-8242:1:exon

MW290_RS32180
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32180
old locus tag: MW290_32180
so part of: sequence
location: 8818..10491
location: region:8818-10491:1
so has part: feature:8818-10491:1:exon
subclass of: SO_0000010

position:8818:1
position: 8818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10491:1
position: 10491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8818-10491:1:exon

MW290_RS32180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32180
old locus tag: MW290_32180
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSRILNLAAISSVILCGACGVSPEGKRQATAGASSASADEPLFEVYVPGSVRSAYGNQETPLNPLLNPKTPAPAFNEDSVMARQCAPSSLDPAMYEGSAPLVDRVLFERTMQQGRETAQARQLWEFNQARLQAQLKVVSGPRSQRSAEPVQPRPSSSGRTPIFQVPRSLPAPRNPWAKQQEELAHNRAVLDAQNERITALSQQYAKMLTKIYSDALSRFIATPTERITLARLNAFDSFRVQQVLRCIETRGETDAATTAQLQQLHARYQPVATAVVSASRAEVANALNAAASSAALQQAWHTKFSTPWLRDLASNDARLSEVAAARSQLLLAQEAQARAEEQRRAAAQAERQAAQLRKQNLDKGARNVAPTPQEVLELATNYLYQNTASQSGPDALGPLERTSNNSFNDFRNVPLLGRLQAGRTSLDIVELNCRPQGKRQACKVSLRVKAQLMDFLLGLMPSEGKLIDVDAEFQWTANGLQSEELDKALPGIRNVIVTRGGGASSASDKSYERYKDQQEYIQNYQQFVETRRSEAAGAGHWYGGESPQNLRRQYGP
SIO_010081: MW290_RS32180
subclass of: SO_0000673
so part of: MW290_RS32180
location: 8818..10491
location: region:8818-10491:1
so has part: feature:8818-10491:1:exon

WP_250200177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8818-10491:1:exon

MW290_RS32185
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32185
old locus tag: MW290_32185
pseudo: true
so part of: sequence
location: 10664..>10990
location: region:10664-10990:1
so has part: feature:10664-10990:1:exon
subclass of: SO_0000010

position:10664:1
position: 10664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10990:1
position: 10990
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10664-10990:1:exon

MW290_RS32185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32185
old locus tag: MW290_32185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011907535.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: MW290_RS32185
subclass of: SO_0000673
so part of: MW290_RS32185
location: 10664..>10990
location: region:10664-10990:1
so has part: feature:10664-10990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10664-10990:1:exon

MW290_RS32190
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32190
old locus tag: MW290_32190
so part of: sequence
location: complement(11342..11692)
location: region:11342-11692:-1
so has part: feature:11342-11692:-1:exon
subclass of: SO_0000010

position:11342:-1
position: 11342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11692:-1
position: 11692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11342-11692:-1:exon

MW290_RS32190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32190
old locus tag: MW290_32190
inference: COORDINATES: protein motif:HMM:NF019843.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDLESVAPMLLVQLTSQDLGVLQLADAGDAEAQNDIALLFLEAGRAESAKYLFEMSAKQGHPDAMHWLGRCAIEGNGTEKDTTLGLSWLTRAAAAGHVISKEMVESLVSGALRAK
SIO_010081: MW290_RS32190
subclass of: SO_0000673
so part of: MW290_RS32190
location: complement(11342..11692)
location: region:11342-11692:-1
so has part: feature:11342-11692:-1:exon

WP_250200178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11342-11692:-1:exon

MW290_RS32195
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32195
old locus tag: MW290_32195
so part of: sequence
location: 12003..12425
location: region:12003-12425:1
so has part: feature:12003-12425:1:exon
subclass of: SO_0000010

position:12003:1
position: 12003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12425:1
position: 12425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12003-12425:1:exon

MW290_RS32195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32195
old locus tag: MW290_32195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014999256.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin-type N-terminal cleavage/methylation domain-containing protein
translation: MTRIQSRAQAGFTLIELMIVVAIIGILAAVALPAYQNYTKKAKFTEVVSRVNGYKTAVSICLQEKGGVADDCDAGVNGIPAAITTTQGVIASIAIANGVITATGTTDVDSRTYIITPTAADTGITWTQSGTCSSASPKLC
SIO_010081: MW290_RS32195
subclass of: SO_0000673
so part of: MW290_RS32195
location: 12003..12425
location: region:12003-12425:1
so has part: feature:12003-12425:1:exon

WP_250200179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12003-12425:1:exon

MW290_RS32200
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32200
old locus tag: MW290_32200
so part of: sequence
location: complement(12566..12760)
location: region:12566-12760:-1
so has part: feature:12566-12760:-1:exon
subclass of: SO_0000010

position:12566:-1
position: 12566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12760:-1
position: 12760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12566-12760:-1:exon

MW290_RS32200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32200
old locus tag: MW290_32200
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIVCLAGLMYVVNEWPRWVLDDSTGCIYEGYQRGIDVDACIWTQFENKKAAKKAASELSSESKR
SIO_010081: MW290_RS32200
subclass of: SO_0000673
so part of: MW290_RS32200
location: complement(12566..12760)
location: region:12566-12760:-1
so has part: feature:12566-12760:-1:exon

WP_250200180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12566-12760:-1:exon

MW290_RS32205
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32205
old locus tag: MW290_32205
so part of: sequence
location: complement(12878..13081)
location: region:12878-13081:-1
so has part: feature:12878-13081:-1:exon
subclass of: SO_0000010

position:12878:-1
position: 12878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13081:-1
position: 13081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12878-13081:-1:exon

MW290_RS32205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32205
old locus tag: MW290_32205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017504319.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MLALNVIRLRGERGWSQEALAFEAGLHRTFVAHVERRARNISLDNIEHLAQALGVRVDQLLKPLSEA
SIO_010081: MW290_RS32205
subclass of: SO_0000673
so part of: MW290_RS32205
location: complement(12878..13081)
location: region:12878-13081:-1
so has part: feature:12878-13081:-1:exon

WP_250200186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12878-13081:-1:exon

MW290_RS32210
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32210
old locus tag: MW290_32210
so part of: sequence
location: 13249..13659
location: region:13249-13659:1
so has part: feature:13249-13659:1:exon
subclass of: SO_0000010

position:13249:1
position: 13249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13659:1
position: 13659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13249-13659:1:exon

MW290_RS32210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32210
old locus tag: MW290_32210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MELTPLVHRLTSHAKANRTAEREGLAPQPDSDSQATESKASLASTDAPPLLAVLRELAGTTDASDAALQQARQAINRELELRARRTLKLAADQYINALGADEGMKSLAEDLCRHVAPKAYSGGWSGLVQHIVKISG
SIO_010081: MW290_RS32210
subclass of: SO_0000673
so part of: MW290_RS32210
location: 13249..13659
location: region:13249-13659:1
so has part: feature:13249-13659:1:exon

WP_250200181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13249-13659:1:exon

MW290_RS32215
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32215
old locus tag: MW290_32215
so part of: sequence
location: complement(13732..14148)
location: region:13732-14148:-1
so has part: feature:13732-14148:-1:exon
subclass of: SO_0000010

position:13732:-1
position: 13732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14148:-1
position: 14148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13732-14148:-1:exon

MW290_RS32215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32215
old locus tag: MW290_32215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004090697.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system MqsA family antitoxin
translation: MICPECGAAELVHDTRDMPVEHNGQTTTIPAVSGDYCPACGEAVLDREQGDRVGELVGAFVRQVDGPAKRYTKRYKLEDLEVFDGAYHLQDEEQIQIYLEEMAKENHAELWAKALDDVARARERWNLPVPGDEPARQP
SIO_010081: MW290_RS32215
subclass of: SO_0000673
so part of: MW290_RS32215
location: complement(13732..14148)
location: region:13732-14148:-1
so has part: feature:13732-14148:-1:exon

WP_250200182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13732-14148:-1:exon

MW290_RS32220
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32220
old locus tag: MW290_32220
so part of: sequence
location: complement(14145..14378)
location: region:14145-14378:-1
so has part: feature:14145-14378:-1:exon
subclass of: SO_0000010

position:14145:-1
position: 14145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14378:-1
position: 14378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14145-14378:-1:exon

MW290_RS32220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32220
old locus tag: MW290_32220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGVSIDARWWALGVVDAFHRRPIQNGVADQLSYTSGRVEGEAARQEGTSIDAVFERCRLPYREADIRPAPIHPKGTP
SIO_010081: MW290_RS32220
subclass of: SO_0000673
so part of: MW290_RS32220
location: complement(14145..14378)
location: region:14145-14378:-1
so has part: feature:14145-14378:-1:exon

WP_250200183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14145-14378:-1:exon

MW290_RS32225
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32225
old locus tag: MW290_32225
so part of: sequence
location: complement(15153..15434)
location: region:15153-15434:-1
so has part: feature:15153-15434:-1:exon
subclass of: SO_0000010

position:15153:-1
position: 15153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15434:-1
position: 15434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15153-15434:-1:exon

MW290_RS32225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32225
old locus tag: MW290_32225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001522659.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MRLRWRPMALADREAIMTFIAADDVNAAIALDEAFEAKAEIARQRPTLYKPGRVAGTRELVVRPNYVMVYRVLPDAIEVLRVLHASQQWPQPL
SIO_010081: MW290_RS32225
subclass of: SO_0000673
so part of: MW290_RS32225
location: complement(15153..15434)
location: region:15153-15434:-1
so has part: feature:15153-15434:-1:exon

WP_250200187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15153-15434:-1:exon

MW290_RS32230
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32230
old locus tag: MW290_32230
so part of: sequence
location: complement(15446..15943)
location: region:15446-15943:-1
so has part: feature:15446-15943:-1:exon
subclass of: SO_0000010

position:15446:-1
position: 15446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15943:-1
position: 15943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15446-15943:-1:exon

MW290_RS32230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32230
old locus tag: MW290_32230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQTSPKTIDHGTLRRLVDAGAHVGAEVVGHGGSWGIVINVGRTSQTLAATRGRPKTFRQFETLAGYLKELGIVEYRVNAAQFDVASAAIAEPDRRSVMASERMKRAHEAAAYDAWFREQVQASIDDPLPSLDDAQARAQMAARRQALLKKAGTPPASKAKGRAAR
SIO_010081: MW290_RS32230
subclass of: SO_0000673
so part of: MW290_RS32230
location: complement(15446..15943)
location: region:15446-15943:-1
so has part: feature:15446-15943:-1:exon

WP_250200184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15446-15943:-1:exon

MW290_RS32235
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32235
old locus tag: MW290_32235
so part of: sequence
location: 16131..16313
location: region:16131-16313:1
so has part: feature:16131-16313:1:exon
subclass of: SO_0000010

position:16131:1
position: 16131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16313:1
position: 16313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16131-16313:1:exon

MW290_RS32235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32235
old locus tag: MW290_32235
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNADQLPDFDVANYLTDEESIQAYLAEAAKEQDAQLWASALADVARARVRWGLRTLPPSA
SIO_010081: MW290_RS32235
subclass of: SO_0000673
so part of: MW290_RS32235
location: 16131..16313
location: region:16131-16313:1
so has part: feature:16131-16313:1:exon

WP_250200185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16131-16313:1:exon

MW290_RS32240
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32240
old locus tag: MW290_32240
so part of: sequence
location: complement(16478..16792)
location: region:16478-16792:-1
so has part: feature:16478-16792:-1:exon
subclass of: SO_0000010

position:16478:-1
position: 16478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16792:-1
position: 16792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16478-16792:-1:exon

MW290_RS32240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32240
old locus tag: MW290_32240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013105132.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-NS histone family protein
translation: MATLKELIEQKEALERQIEEAKKTNREEGLAKLREVMEQYGLTAADLNGSVREARASTKGKSTGKVAAKYKNPETGDTWTGRGLKPKWLKAALEGGKKIEDFVI
SIO_010081: MW290_RS32240
subclass of: SO_0000673
so part of: MW290_RS32240
location: complement(16478..16792)
location: region:16478-16792:-1
so has part: feature:16478-16792:-1:exon

WP_250200157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16478-16792:-1:exon

MW290_RS32245
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32245
old locus tag: MW290_32245
so part of: sequence
location: 16856..17821
location: region:16856-17821:1
so has part: feature:16856-17821:1:exon
subclass of: SO_0000010

position:16856:1
position: 16856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17821:1
position: 17821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16856-17821:1:exon

MW290_RS32245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32245
old locus tag: MW290_32245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011382063.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MAQELVTVTSGPLLAEARFRQLAAVPPELEWFANIDNERTRRAYKADLADFSAFVGLARPEDFRSVTRAHVIAWRQSLENRQQSGATIRRKLAALSSLFDYLCERNAVDLNPVRGTKRPKVETQEGKTPALSDDQVRALLAAPDAHSLKGKRDRAILSTLLYHGLRREELCSLRKGDIETRRGVPHLRVYGKGGKLRYVPLHPATAGLIDDYLQASGHATSDEAPLFRPVRDNRRGLAAGAALTTNGVYTLLQHYAGLAQLDVGRLGPHSLRATAATNALEHEADIAKVQEWLGHANIATTRIYDRRRTKPEESPTFRVQY
SIO_010081: MW290_RS32245
subclass of: SO_0000673
so part of: MW290_RS32245
location: 16856..17821
location: region:16856-17821:1
so has part: feature:16856-17821:1:exon

WP_250200158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16856-17821:1:exon

MW290_RS32250
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32250
old locus tag: MW290_32250
so part of: sequence
location: complement(17854..18357)
location: region:17854-18357:-1
so has part: feature:17854-18357:-1:exon
subclass of: SO_0000010

position:17854:-1
position: 17854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18357:-1
position: 18357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17854-18357:-1:exon

MW290_RS32250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32250
old locus tag: MW290_32250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVKKTPAAPNPALPRAKTNKIRQNYKLDPVLVERLRDSAQQRGMTVTAVIEEAARHYLDGQEVLTEIAETEARLAATMTALDREVGQAYSAVQINMAMLDQMAKFLFFHTEDLPGSEVVGATMRMNRRREAFIRELPSSYNKRRRRAAIVAAVEDQESQHGGAATD
SIO_010081: MW290_RS32250
subclass of: SO_0000673
so part of: MW290_RS32250
location: complement(17854..18357)
location: region:17854-18357:-1
so has part: feature:17854-18357:-1:exon

WP_250200159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17854-18357:-1:exon

MW290_RS32255
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32255
old locus tag: MW290_32255
so part of: sequence
location: 18933..19427
location: region:18933-19427:1
so has part: feature:18933-19427:1:exon
subclass of: SO_0000010

position:18933:1
position: 18933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19427:1
position: 19427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18933-19427:1:exon

MW290_RS32255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32255
old locus tag: MW290_32255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQPDRPVGLRAYISDDRSSKISHLRRWWFEIDRLKAEGITDSMLVEAMARAGVRFTSRSSFATTLARVRKEIREGKFQPTAFSVAVPPVLERQQHVPSITLTELTPAPANPLFPHRESTQSADIDIYAPKPSKKELREQKASRINLDHPNTNPLLFAALKEQSK
SIO_010081: MW290_RS32255
subclass of: SO_0000673
so part of: MW290_RS32255
location: 18933..19427
location: region:18933-19427:1
so has part: feature:18933-19427:1:exon

WP_250200160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18933-19427:1:exon

MW290_RS32260
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32260
old locus tag: MW290_32260
so part of: sequence
location: 19424..20122
location: region:19424-20122:1
so has part: feature:19424-20122:1:exon
subclass of: SO_0000010

position:19424:1
position: 19424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20122:1
position: 20122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19424-20122:1:exon

MW290_RS32260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32260
old locus tag: MW290_32260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002933279.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: StbB family protein
translation: MKIAVMNFSGNVGKTTIAKYLLQPRLQDARYLAVETINADGSDGAAMKGSQYGEIIDSLRLLSGDVVIDVGASNVETFVELMQDYMGSHEEFDYFVIPAVQAPKQQRDTIATIDALNEIGVEPEKIRVVFNMMERGDDPARVFSGLFDLHRRDHSFVLRPEAVVTRSEIWARLKDAKRSLADIAADTTDLKGALTRADDPYEKLRLSQEISNRGLAQGVNKQLDGVFRALFH
SIO_010081: MW290_RS32260
subclass of: SO_0000673
so part of: MW290_RS32260
location: 19424..20122
location: region:19424-20122:1
so has part: feature:19424-20122:1:exon

WP_250200161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19424-20122:1:exon

MW290_RS32265
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32265
old locus tag: MW290_32265
so part of: sequence
location: 20122..20565
location: region:20122-20565:1
so has part: feature:20122-20565:1:exon
subclass of: SO_0000010

position:20565:1
position: 20565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20122-20565:1:exon

MW290_RS32265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32265
old locus tag: MW290_32265
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDRPLVGTEQPAPGSALDFLIAELLGDVGKVDAAIKTLRDRLGDTEDRIRSAGTAAANTVVEVTQQAFAELADKRAQEEFKHVHAARVEAANLRSAFMIEARAVLRQIQVAKLKQTRHFIMASALIATVSCLAGVAMGYALANGWSP
SIO_010081: MW290_RS32265
subclass of: SO_0000673
so part of: MW290_RS32265
location: 20122..20565
location: region:20122-20565:1
so has part: feature:20122-20565:1:exon

WP_250200162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20122-20565:1:exon

MW290_RS32270
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32270
old locus tag: MW290_32270
so part of: sequence
location: complement(20943..21233)
location: region:20943-21233:-1
so has part: feature:20943-21233:-1:exon
subclass of: SO_0000010

position:20943:-1
position: 20943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21233:-1
position: 21233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20943-21233:-1:exon

MW290_RS32270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32270
old locus tag: MW290_32270
EC number: 2.7.7.65
inference: COORDINATES: protein motif:HMM:TIGR00254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diguanylate cyclase
translation: MARADAGRRGAAGAWQGAQESHGASADIGDGIDAGLPIHPSFDGGAGVAALFIDLDRFKHVNDTGGHAAGDRMLQQVAQLLLNGVRRDDLVARLGR
SIO_010081: MW290_RS32270
subclass of: SO_0000673
so part of: MW290_RS32270
location: complement(20943..21233)
location: region:20943-21233:-1
so has part: feature:20943-21233:-1:exon

WP_250200188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20943-21233:-1:exon

MW290_RS32275
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32275
old locus tag: MW290_32275
so part of: sequence
location: complement(21720..22724)
location: region:21720-22724:-1
so has part: feature:21720-22724:-1:exon
subclass of: SO_0000010

position:21720:-1
position: 21720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22724:-1
position: 22724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21720-22724:-1:exon

MW290_RS32275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32275
old locus tag: MW290_32275
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLASAISEKNVVSVTPLLMAVPSFRGGSSSKELYALYFFEWRDCMAHFSVRASLVILAGLGGCASSDIASPMRNSAGDYLIPAGLPAVASIPYENDVVGVKKQLKALYQTWRGKQVQLEQARDGSRVIQFAGITLAGIGAIANSHADVAKIGLGAAGSAALTESAFNVQGQAGNYKVAADTVACIERRISAVPSDFWGLFSGGIPNGPRGDAISAGLTSDDYNVLLRLFSSISDSISGVVDRLITDQLNSRISLPTQAEVIAALSQSSAAGGAAARAGARVAGVAAAAAPPPGVAAAPASNEYMKVAPGSYEIGLQLPTEIKKCIVVRGKPDAD
SIO_010081: MW290_RS32275
subclass of: SO_0000673
so part of: MW290_RS32275
location: complement(21720..22724)
location: region:21720-22724:-1
so has part: feature:21720-22724:-1:exon

WP_250200163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21720-22724:-1:exon

MW290_RS32280
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32280
old locus tag: MW290_32280
so part of: sequence
location: 22715..23998
location: region:22715-23998:1
so has part: feature:22715-23998:1:exon
subclass of: SO_0000010

position:22715:1
position: 22715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23998:1
position: 23998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22715-23998:1:exon

MW290_RS32280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32280
old locus tag: MW290_32280
inference: COORDINATES: protein motif:HMM:NF013559.2
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M12 family metallopeptidase
translation: MQAKILFISFAAALASGLVWSQSNSFVEPDLAEGLPEHLLYLYSGSEKPSPEGTANQLFASLRRWEPGRRLRVCYFQGNAGVASLIQEVASEWNKHSSVKFDFGDTNGKWPNCLSPSAGFFEVRIGFNSAGYWSMIGTDSETRFSGLQPSMNFEGFNRTYFAEPSQSSNVVVSASAYHRAIILHEFGHALGLLHEQQNPSLKCHEQIKWTGPGNVYEYYKRPPNRWEPETVDRNFGFIWQFDPDFVGWEDDVHSIMMYDIPPAILKSGINSNCASRKNHELSKRDIKLVATIYPAQQGKTPVDLPMSSSRQPPVASATNAFEAQDTTRRIVADLQSDDAFTRRNARLRLATVLPVLPSATTTSLVDELLSGDYRQKLGLAAALANTPKTFQLPNSARAQVSKAASVASDPILKKQLQLANKPKLQVD
SIO_010081: MW290_RS32280
subclass of: SO_0000673
so part of: MW290_RS32280
location: 22715..23998
location: region:22715-23998:1
so has part: feature:22715-23998:1:exon

WP_250200164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22715-23998:1:exon

MW290_RS32285
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32285
old locus tag: MW290_32285
so part of: sequence
location: complement(24043..25818)
location: region:24043-25818:-1
so has part: feature:24043-25818:-1:exon
subclass of: SO_0000010

position:24043:-1
position: 24043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25818:-1
position: 25818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24043-25818:-1:exon

MW290_RS32285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32285
old locus tag: MW290_32285
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MPRRAPVVADDVRTLRLGPHCFAHLRAVAEGVPVAESAQRYLAIEHGNQAPSAHRLLVERVAAVARRAGDPRWRLVGLRIEEPAGDPPALDAWVQAEGLDGWSQAEQLQLYQARFGQETPGEHRRRQRNARLRAHQRSLLRELEARAGEPASPLDLVDGWLAPALTEVVRRLGVLTLADLQARIARGGRWWLGLPSYGPVKAARLARYVQLLLPASPMPSWPVVTAGERLARYSGAQGLNRVPRGEGGFTGTDAENDHQAVQAWIAARAGSPATVKAYAREAERFILWCVLERQKALSDAGAEDCRAYMDFLAKVPDRWISRDNAHRMAPGWAPFKGPLSLASQKQALAALHSLFAWLVQARYLGSNPWVLVNRKLGDDPQGQGDDIGSRAFTPAAWQALIAYLDQAGDTPAHRRMRWVCMFASATGLRAAELIGAKVGHLQATPGGWVLRVHGKGRKNRMVPVPTSAMGATWAYLASRGLTMETAAPETPLLGSLSGEGGVGYRALHEAFARLVKQAFTGLPEAERRRVQRSSMHWLRHTHATRAAEHGVPPDILQENLGQSDPRTTARYYRAQLERRQQAMEDVFCAPP
SIO_010081: MW290_RS32285
subclass of: SO_0000673
so part of: MW290_RS32285
location: complement(24043..25818)
location: region:24043-25818:-1
so has part: feature:24043-25818:-1:exon

WP_250200165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24043-25818:-1:exon

MW290_RS32290
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32290
old locus tag: MW290_32290
so part of: sequence
location: 26507..26647
location: region:26507-26647:1
so has part: feature:26507-26647:1:exon
subclass of: SO_0000010

position:26507:1
position: 26507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26647:1
position: 26647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26507-26647:1:exon

MW290_RS32290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32290
old locus tag: MW290_32290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNDMSTSSIEDGEVIYRMTIRTKTGKVIRRANGQPFRIVIRKRKG
SIO_010081: MW290_RS32290
subclass of: SO_0000673
so part of: MW290_RS32290
location: 26507..26647
location: region:26507-26647:1
so has part: feature:26507-26647:1:exon

WP_250200166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26507-26647:1:exon

MW290_RS32295
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32295
old locus tag: MW290_32295
so part of: sequence
location: 26927..27628
location: region:26927-27628:1
so has part: feature:26927-27628:1:exon
subclass of: SO_0000010

position:26927:1
position: 26927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27628:1
position: 27628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26927-27628:1:exon

MW290_RS32295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32295
old locus tag: MW290_32295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017183617.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPTIVFVSPKGGAGKTTAALVLANELARGAAVTVIDADPNHPIRSWAAEAHPGDNLTVISDSDEENILDRIEEAAATTPFVIVDLEGSAAKIVLLAVSQADFVVVPTQGSQLDAEQASRALRVIKQQEKMSGRPVPFAVLLTRTNVAIRTRTMTHIQRGLIDAGVPVLNTELHEREAFRAMFSFRQPLEKLDPKEVANLDKAMANAEAFAQELVALLRKEQGRTPGRTAEQVA
SIO_010081: MW290_RS32295
subclass of: SO_0000673
so part of: MW290_RS32295
location: 26927..27628
location: region:26927-27628:1
so has part: feature:26927-27628:1:exon

WP_250200167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26927-27628:1:exon

MW290_RS32300
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32300
old locus tag: MW290_32300
so part of: sequence
location: 27631..27966
location: region:27631-27966:1
so has part: feature:27631-27966:1:exon
subclass of: SO_0000010

position:27631:1
position: 27631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27966:1
position: 27966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27631-27966:1:exon

MW290_RS32300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32300
old locus tag: MW290_32300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018084103.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRANPFGDLGDFTPKSTPKPVEPQQIERLAADNGFPSRQPVAKQAPTVAAPAPTPARRRYVTGRNRQINLKASDETIARFYRLADERQVPLAELFELAVAALEEQGRLES
SIO_010081: MW290_RS32300
subclass of: SO_0000673
so part of: MW290_RS32300
location: 27631..27966
location: region:27631-27966:1
so has part: feature:27631-27966:1:exon

WP_250200189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27631-27966:1:exon

MW290_RS32305
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32305
old locus tag: MW290_32305
so part of: sequence
location: 28729..29802
location: region:28729-29802:1
so has part: feature:28729-29802:1:exon
subclass of: SO_0000010

position:28729:1
position: 28729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29802:1
position: 29802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28729-29802:1:exon

MW290_RS32305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32305
old locus tag: MW290_32305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012806093.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MVGDNTKHANEAVGGDSLRERSPLLPIRHQPDFFVCDVFDAAMKGDTASMEHPIFSLSKKPDMKTRRYENGNSWAEVRPGAKGLATVFDRDVLIYCISQLIGALNANRPVSRTLRLRAHDLLIATNRDTSGRGYLNLREALERLQGTQIATNLTTGGKEIFDLFSLIDRARIVRETRDGRMEEVEIQLSDWVFQAVQAQEVLTLDRRYFQLAKPLERRLYELARKHVGQQTSFKIGLDKLRLKCGSQSTLKEFRRLLQAIIEDDRNHDHMPGYSFELNGDMVEMRSKSGASLRLPGIFISLDPDIHEKARQLAPGWDVHALESEWRDWIVKKGITPHRANAHFLAFCKRRGKYPGFT
SIO_010081: MW290_RS32305
subclass of: SO_0000673
so part of: MW290_RS32305
location: 28729..29802
location: region:28729-29802:1
so has part: feature:28729-29802:1:exon

WP_250200168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28729-29802:1:exon

MW290_RS32310
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32310
old locus tag: MW290_32310
so part of: sequence
location: 29926..31380
location: region:29926-31380:1
so has part: feature:29926-31380:1:exon
subclass of: SO_0000010

position:29926:1
position: 29926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31380:1
position: 31380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29926-31380:1:exon

MW290_RS32310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32310
old locus tag: MW290_32310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010641654.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction-modification system subunit M
translation: MFEQSFKNIDDILHKDAGCTSELDYTEQSSWLLFLKYLDALEQDKAAEAELEGKAYSFILAEVFRWDNWAAPKTPDGRLDHNAAMTGDDLRDFVNGSLFPYLAGFKQRASGPNTIEYKIGEVFSEIKNKIQSGYNLRDVIDLVDELRFRSQTEKHELSHLYEAKIKNMGNAGRNGGEYYTPRPLIRAMLQVVAPRIGERIYDGACGSAGFLCEAFDYLSSKPGLTTADLHTLQTRTFYGKEKKSLAYVIAIMNMILHGIEAPNVVHANTLAENIADIQDKDRYDVVLANPPFGGKERREVQQNFPVKTGETAFLFLQHFIKSLRAGGRAAIVIKNTFLSNTDNASVSLRRQLLEGCNLHTVLDCPGGTFQGAGVKTVVLFFEKGAPTRRVWYYQLDPGRSLGKTTPLNDDDLAEFIALQKTFADSTKSWSVDVADIDAGTYELSVKNPNGGTVVTLRTPKDILDEIAVLDAESAGALETIRGLL
SIO_010081: MW290_RS32310
subclass of: SO_0000673
so part of: MW290_RS32310
location: 29926..31380
location: region:29926-31380:1
so has part: feature:29926-31380:1:exon

WP_250200169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29926-31380:1:exon

MW290_RS32315
type: Gene
subclass of: SO_0000704
RO_0002162: 391953
locus tag: MW290_RS32315
old locus tag: MW290_32315
so part of: sequence
location: complement(31504..32729)
location: region:31504-32729:-1
so has part: feature:31504-32729:-1:exon
subclass of: SO_0000010

position:31504:-1
position: 31504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32729:-1
position: 32729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31504-32729:-1:exon

MW290_RS32315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391953
locus tag: MW290_RS32315
old locus tag: MW290_32315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558246.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MSKSNKFSPEVRERAVRMVQEHRGEYPSLWAAIESIAPKIGCVPQTLNEWVKRAEVDAGVREGVTTSEAERVKELEREVRELRKANEILKLASAFFAPGGARPPPQVLKAFVDRHRQEFGVESICRVLQIAPSAYWRHASRQRNPALRSRRAQRDACLVLEVQRVWQANMQVYGADKVWRQLKREGVAVARCTVERLMRQQGLQGVRRGKAVRTTVPDLKAPCPLDRVNRQFRAERPNQLWVSDFTYVSTWQGWVYVAFVVDVFSRRIVGWRQSSSMHTEFVLDALEQALYDRKPTEGDGLVHHSDRGSQYLSIRYSERLAEAGIEPSVGSKGDSYDNALAETINGLYKAEVIHRRGPWKTKQAVELATLEWVAWFNHHRLMEPMGYIPPAEFEANYHRQRAGQAATV
SIO_010081: MW290_RS32315
subclass of: SO_0000673
so part of: MW290_RS32315
location: complement(join(31504..32438,32438..32729))
location: region:31504-32729:-1
so has part: feature:32438-32729:-1:exon
so has part: feature:31504-32438:-1:exon

WP_250196184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32438-32729:-1:exon

position:32438:-1
position: 32438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31504-32438:-1:exon

MW290_RS32315
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 391953
locus tag: MW290_RS32315
old locus tag: MW290_32315
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.1
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
SIO_010081: MW290_RS32315
subclass of: SO_0000673
so part of: MW290_RS32315
location: complement(32335..32451)
location: region:32335-32451:-1
so has part: feature:32335-32451:-1:exon

position:32335:-1
position: 32335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32451:-1
position: 32451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32335-32451:-1:exon