Roseobacter litoralis Och 149 plasmid pRLO149_63, complete sequence.
type: Entry
definition: Roseobacter litoralis Och 149 plasmid pRLO149_63, complete sequence.
sequence version: NC_015729.1
sequence date: 2023-05-02
sequence: sequence
division: CON
label: NC_015729.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02603624
keyword: RefSeq
source: Roseobacter litoralis Och 149
organism: Roseobacter litoralis Och 149
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Roseobacter.
reference: 1
references: 21693016
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP002626.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/02/2023 02:19:05\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,549\nCDSs (total) :: 4,505\nGenes (coding) :: 4,405\nCDSs (with protein) :: 4,405\nGenes (RNA) :: 44\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 38\nncRNAs :: 3\nPseudo Genes (total) :: 100\nCDSs (without protein) :: 100\nPseudo Genes (ambiguous residues) :: 0 of 100\nPseudo Genes (frameshifted) :: 49 of 100\nPseudo Genes (incomplete) :: 63 of 100\nPseudo Genes (internal stop) :: 31 of 100\nPseudo Genes (multiple problems) :: 36 of 100\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 63532
topology: circular
so has quality: SO_0000988
location: 1..63532
location: region:1-63532:1
RO_0002162: 391595

NC_015729
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02603624
type: BioSample
SIO_000068: biosample

1
title: Comparative genome analysis and genome-guided physiological analysis of Roseobacter litoralis
author: Kalhoefer, D.
author: Thole, S.
author: Voget, S.
author: Lehmann, R.
author: Liesegang, H.
author: Wollher, A.
author: Daniel, R.
author: Simon, M.
author: Brinkhoff, T.
journal: BMC Genomics 12, 324 (2011)
pubmed: 21693016
comments: Publication Status: Online-Only

21693016
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Kalhoefer, D.
author: Thole, S.
author: Voget, S.
author: Lehmann, R.
author: Liesegang, H.
author: Wollherr, A.
author: Daniel, R.
author: Rabus, R.
author: Simon, M.
author: Brinkhoff, T.
journal: Submitted (23-MAR-2011) Goettingen Genomics Laboratory, Georg-August University Goettingen, Grisebachstr. 8, Goettingen, Lower Saxony D-37077, Germany

3
title: Direct Submission
author: Brinkhoff, T.
author: Wawrik, B.
author: Simon, M.
author: Ferriera, S.
author: Johnson, J.
author: Kravitz, S.
author: Beeson, K.
author: Sutton, G.
author: Rogers, Y.-H.
author: Friedman, R.
author: Frazier, M.
author: Venter, J.C.
journal: Submitted (19-NOV-2007) J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63532:1
position: 63532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-63532:1:source
so part of: sequence
organism: Roseobacter litoralis Och 149
mol type: genomic DNA
strain: Och 149
isolation source: seaweed
culture collection: ATCC:49566
culture collection: DSM:6996
type material: type strain of Roseobacter litoralis
plasmid: pRLO149_63
note: type strain of Roseobacter litoralis

391595
type: Taxonomy
SIO_000068: taxonomy

RLO149_RS22540
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22540
old locus tag: RLO149_p630010
so part of: sequence
location: 101..1492
location: region:101-1492:1
so has part: feature:101-1492:1:exon
subclass of: SO_0000010

position:101:1
position: 101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1492:1
position: 1492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101-1492:1:exon

RLO149_RS22540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22540
old locus tag: RLO149_p630010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013959933.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTDSPPYFNISPDKARAELPPPMDTTALLGIAQACNQGRNDLAGRGLDESGARHLRSFSTWEITKYLIPVAPAHFRRVLRQNPDLPQGISETEGGAKWFTLDEVLRLRAHFGQEGSKAKEYLPYRPKGLPAKIVAVANFKGGVGKTSTCAHLAMSAALDGYKVLVVDLDSQGSMSSIFGAQVDDEWQTVFPLLAKHYATHLRAENQRRLDRGEAPLPFDDILSEALKITPGDIIQKTHWPNIDLIGAQLNLYWSEFQIPVWRMAARSWKLWDALGDALAESAVLEEYDLIFLDTPPALGYLTINGLSAADILLVPVGASFVEFDSTGRFFDMLHATFSSIEEGENMAARALGREELAFEWDAVQTVITRFDASQQSEMASLMQSYMGRTLSPFRQDFTALIGQAGESVNGIYEADYRDFNRDTYARGRATFDETYAAFKRLLYGIWRRDELAQAAGATETAAE
SIO_010081: RLO149_RS22540
subclass of: SO_0000673
so part of: RLO149_RS22540
location: 101..1492
location: region:101-1492:1
so has part: feature:101-1492:1:exon

WP_013959933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101-1492:1:exon

RLO149_RS22545
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22545
old locus tag: RLO149_p630020
so part of: sequence
location: 1619..2593
location: region:1619-2593:1
so has part: feature:1619-2593:1:exon
subclass of: SO_0000010

position:1619:1
position: 1619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2593:1
position: 2593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1619-2593:1:exon

RLO149_RS22545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22545
old locus tag: RLO149_p630020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011836179.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB N-terminal domain-containing protein
translation: MAKRKRLSPAALTEAPPETKAALGWMGHGTRRPPIADVTGDAAEQSAFEEVAGELRRARTEGRMVLSLPLEDIDATHLVRDRVVLDAEEMAVLKDSLRARGQQTPIEVLDLGQGRYGLISGWRRLTALQALLQETEEDRFRTINALLRTPQDVGASYLAMVEENEIRADLSFYERARIAVQAARAGVFSDIHTAVQSLFSAARAPKRSKIMAFTHLVEKLDADLRFPAAIPEKVGLALVSALQTDKRFGARLTKALRAADPQHATAERKVLDAALKTRTATPPKPAEQILPGVTLEAGRGRITLSGVNVDATLEADLRRWLAAR
SIO_010081: RLO149_RS22545
subclass of: SO_0000673
so part of: RLO149_RS22545
location: 1619..2593
location: region:1619-2593:1
so has part: feature:1619-2593:1:exon

WP_013959934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1619-2593:1:exon

RLO149_RS22550
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22550
old locus tag: RLO149_p630030
so part of: sequence
location: complement(2881..3579)
location: region:2881-3579:-1
so has part: feature:2881-3579:-1:exon
subclass of: SO_0000010

position:2881:-1
position: 2881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3579:-1
position: 3579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881-3579:-1:exon

RLO149_RS22550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22550
old locus tag: RLO149_p630030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655500.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VPLPA-CTERM sorting domain-containing protein
translation: MKLTAILMAATFAVGGSFTAASAATMTSGATNAISGNICEGGVPPIDGTCPADHNLGDFGTNFNKVKISLDGDATIWGGVAHRDNSSSSALRFVDNWTMNLGSKAFKVTFNWQVKYARTNPNFDGQIVVGDTLSGNTIVGGSSYDFTTGPKDNPVRTSGSIDLGELTGDGLFFSVDPILGQFVTTADRSTHEVGTWDLQLIEIAPVPLPASALLLMGGLGGLSAMRGFGRKS
SIO_010081: RLO149_RS22550
subclass of: SO_0000673
so part of: RLO149_RS22550
location: complement(2881..3579)
location: region:2881-3579:-1
so has part: feature:2881-3579:-1:exon

WP_013959935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2881-3579:-1:exon

RLO149_RS22555
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22555
old locus tag: RLO149_p630040
so part of: sequence
location: complement(3977..4567)
location: region:3977-4567:-1
so has part: feature:3977-4567:-1:exon
subclass of: SO_0000010

position:3977:-1
position: 3977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4567:-1
position: 4567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3977-4567:-1:exon

RLO149_RS22555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22555
old locus tag: RLO149_p630040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655499.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VPLPA-CTERM sorting domain-containing protein
translation: MNFTKMLLTATFALGAMLTGASAATIVSNVSGNVCEGGVAPAVGAPCPSAFNLGDFNSTVDDPTLEVVGDTRIWGGVAHRTNTTFFDSWTMDFGSTFYSGTFNYQATSANFDAVLTVGGAPFTFTTPPANGSIDIGTLTGVVTFVLNPIAGSFGPNPDEVATWDLELSQVPLPASALLLIAGIGGLGAMRGFGRKS
SIO_010081: RLO149_RS22555
subclass of: SO_0000673
so part of: RLO149_RS22555
location: complement(3977..4567)
location: region:3977-4567:-1
so has part: feature:3977-4567:-1:exon

WP_013959936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3977-4567:-1:exon

RLO149_RS22560
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22560
old locus tag: RLO149_p630050
so part of: sequence
location: complement(4908..6323)
location: region:4908-6323:-1
so has part: feature:4908-6323:-1:exon
subclass of: SO_0000010

position:4908:-1
position: 4908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6323:-1
position: 6323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4908-6323:-1:exon

RLO149_RS22560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22560
old locus tag: RLO149_p630050
EC number: 2.7.7.13
EC number: 5.3.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655501.1
GO function: GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
translation: MITPVLLCGGSGTRLWPLSRKSYPKQFANLLGDETLFQASARRLSGAAYAPPVVVTASDFRFIVTEQLQGIGVDPGAILIEPAGRNTAPAVLAAACHIAASDPDGLMLVAPSDHVIPDAQAFSAAVNAGVTAAQAGQLVTFGITPTQAETGYGYLELVDPPKGTTPAPLKRFVEKPDQTRAEAMLKDAHFMWNAGIFLFRASDIIAAFKAHATALLEPVSSAYAQAKADLGFLRLDPDNWARAEDISIDYAVMEKADNLSVVPFSAGWSDLGGWDAVWAETGPDAEGVATSENATAIDCHDTLLRSESAALEVVGIGLENTIVVAMPDAVLVADKSRAQDVKLAVAALKEKSALQAESFPKDHRPWGWFESLVIGQRFQVKRIHVHPGAALSLQSHHHRSEHWIVVEGTARVTVDETVKLVSENQSVYIPLGATHRMENPGKVPMVLIEVQTGSYLGEDDIIRYEDVYARD
SIO_010081: RLO149_RS22560
subclass of: SO_0000673
so part of: RLO149_RS22560
location: complement(4908..6323)
location: region:4908-6323:-1
so has part: feature:4908-6323:-1:exon

WP_044025837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4908-6323:-1:exon

RLO149_RS22565
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
gene: xrtD
locus tag: RLO149_RS22565
old locus tag: RLO149_p630060
so part of: sequence
location: 6574..8178
location: region:6574-8178:1
so has part: feature:6574-8178:1:exon
subclass of: SO_0000010

position:6574:1
position: 6574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8178:1
position: 8178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6574-8178:1:exon

RLO149_RS22565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
gene: xrtD
locus tag: RLO149_RS22565
old locus tag: RLO149_p630060
EC number: 3.4.22.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655502.1
GO function: GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]
GO process: GO:0043687 - post-translational protein modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VPLPA-CTERM-specific exosortase XrtD
translation: MSASDFQTSVRGGFAAFLSWGVFWLLVAVIGAGVFFADGISALLEAWQLPEYSHGPLIPVLSAFLFLKQLKNYPINPDIYRNRWPGVALVTLSLVMAGFGILAGIGDIVAYGLILWIGGVLLVSWGWDTGKHFWPGVVHLVYMLPLPALVYYKTTTYLQFVSSELGVWFLRLFDVPVFLDGNIIDLGILKLHVAEACSGLRYMFPIMSFSYIFATLYKGPNWHKVVLLLAAVPIAIFMNSVRIAVAGVIVQYYGVEWLDGFTHFFEGWVIFLACILILFGLAWLMLFLHPQRPTLVDALDLDTAGLGAQLSRLQYIQPSKALITVSVLMLGAVMALQAIPDRENVTPDRDSFALFPRALGEWRQQGPRQFLTPDIQATLAADDYHQVTLTKAGDTHSVGLFMAWYEDQIKGGVHSPEICLPGAGWEIAWLERSDLSEVMQSDVPFRINRAIIQKGETRMMVYYWFQQQDRRIAWDFAAKYWLMIDGITTGRTDGALVRLTTLMDPREEDDIAEARLLEVLKEIQDPLKRFIPAR
SIO_010081: RLO149_RS22565
subclass of: SO_0000673
so part of: RLO149_RS22565
location: 6574..8178
location: region:6574-8178:1
so has part: feature:6574-8178:1:exon

WP_013959938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6574-8178:1:exon

RLO149_RS24295
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS24295
so part of: sequence
location: complement(8542..8766)
location: region:8542-8766:-1
so has part: feature:8542-8766:-1:exon
subclass of: SO_0000010

position:8542:-1
position: 8542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8766:-1
position: 8766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8542-8766:-1:exon

RLO149_RS24295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS24295
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGQRDIRRLLIVGAVAVVRWASRKGAPEESWLARMLERKPKMLVAIALANRMAHTTWALMRNGEDYRDPAMAIA
SIO_010081: RLO149_RS24295
subclass of: SO_0000673
so part of: RLO149_RS24295
location: complement(8542..8766)
location: region:8542-8766:-1
so has part: feature:8542-8766:-1:exon

WP_245538209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8542-8766:-1:exon

RLO149_RS24300
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS24300
so part of: sequence
location: complement(8753..9076)
location: region:8753-9076:-1
so has part: feature:8753-9076:-1:exon
subclass of: SO_0000010

position:8753:-1
position: 8753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9076:-1
position: 9076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8753-9076:-1:exon

RLO149_RS24300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS24300
inference: COORDINATES: protein motif:HMM:NF014430.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRAHLAEQGIVAPVGPAHVGRLAAFVDGDDGALPSAVRYLARSLLDQIAGLSEKAADLDAELRRRESTDDGDLLEGARLRSLGWSYAETAFEGRQRAPWPDIKDGPA
SIO_010081: RLO149_RS24300
subclass of: SO_0000673
so part of: RLO149_RS24300
location: complement(8753..9076)
location: region:8753-9076:-1
so has part: feature:8753-9076:-1:exon

WP_245538210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8753-9076:-1:exon

RLO149_RS24305
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS24305
so part of: sequence
location: complement(9081..9386)
location: region:9081-9386:-1
so has part: feature:9081-9386:-1:exon
subclass of: SO_0000010

position:9081:-1
position: 9081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9386:-1
position: 9386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9081-9386:-1:exon

RLO149_RS24305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS24305
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFRRKLSRAQLLKFLSEQPPCVVAMEACASAYYWGWAIGDLSHEARLIPPAYVKPFVKRQNNDMADAEAIAEAAFRPTMLFVAVKSEAHPRSPCSAAHPDD
SIO_010081: RLO149_RS24305
subclass of: SO_0000673
so part of: RLO149_RS24305
location: complement(9081..9386)
location: region:9081-9386:-1
so has part: feature:9081-9386:-1:exon

WP_245538211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9081-9386:-1:exon

RLO149_RS23390
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS23390
old locus tag: RLO149_p630100
pseudo: true
so part of: sequence
location: complement(<9622..10303)
location: region:9622-10303:-1
so has part: feature:9622-10303:-1:exon
subclass of: SO_0000010

position:9622:-1
position: 9622
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:10303:-1
position: 10303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9622-10303:-1:exon

RLO149_RS23390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS23390
old locus tag: RLO149_p630100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010915363.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: RLO149_RS23390
subclass of: SO_0000673
so part of: RLO149_RS23390
location: complement(<9622..10303)
location: region:9622-10303:-1
so has part: feature:9622-10303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9622-10303:-1:exon

RLO149_RS22590
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22590
pseudo: true
so part of: sequence
location: 11015..12240
location: region:11015-12240:1
so has part: feature:11015-12240:1:exon
subclass of: SO_0000010

position:11015:1
position: 11015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12240:1
position: 12240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11015-12240:1:exon

RLO149_RS22590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611960.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: RLO149_RS22590
subclass of: SO_0000673
so part of: RLO149_RS22590
location: 11015..12240
location: region:11015-12240:1
so has part: feature:11015-12240:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11015-12240:1:exon

RLO149_RS22590
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 391595
locus tag: RLO149_RS22590
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.4
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: RLO149_RS22590
subclass of: SO_0000673
so part of: RLO149_RS22590
location: 11296..11412
location: region:11296-11412:1
so has part: feature:11296-11412:1:exon

position:11296:1
position: 11296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11412:1
position: 11412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11296-11412:1:exon

RLO149_RS23485
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS23485
pseudo: true
so part of: sequence
location: complement(<12306..12737)
location: region:12306-12737:-1
so has part: feature:12306-12737:-1:exon
subclass of: SO_0000010

position:12306:-1
position: 12306
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:12737:-1
position: 12737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12306-12737:-1:exon

RLO149_RS23485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS23485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611339.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: RLO149_RS23485
subclass of: SO_0000673
so part of: RLO149_RS23485
location: complement(<12306..12737)
location: region:12306-12737:-1
so has part: feature:12306-12737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12306-12737:-1:exon

RLO149_RS22600
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22600
old locus tag: RLO149_p630140
so part of: sequence
location: complement(12954..14348)
location: region:12954-14348:-1
so has part: feature:12954-14348:-1:exon
subclass of: SO_0000010

position:12954:-1
position: 12954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14348:-1
position: 14348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12954-14348:-1:exon

RLO149_RS22600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22600
old locus tag: RLO149_p630140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007257267.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphomannomutase
translation: MTVKFGTSGLRGLVTGMTPTLIASYVQAFLMACDTRSVLCVGRDLRPSSPRIANNVIEAARASGVRVIDCGTLPTPALALAAQTAGGGAVMVTGSHIPADRNGLKFYTVTGEITKADEETIMQHLPDVPSPQGTPGGPLSTDSSALQAYVSRYIDAFGPKALSGQRIGVYTHSAVGRDALIQIITELGAEVIELGRSDDFIPVDTEAVDPEVRAQIKMWVKGHGLNALISTDGDSDRPLLADETGRIVPGDILGQITAEALGAEVIATPISSNSGVTQKGFDAVHLTRIGSPFVIAAMENAQGRIVGYEANGGFLLGFDAMGPTGPIPALLTRDCTLPIVMTLYAGRKSIAARVSQEPPVVTIADRLQGLDPDKSKRLIEQWQKYPAARAAFLNSLGKEELRLDLMDGVRMILTDGDVIHIRSSKNAPELRLYLETKSHASAYALCSEALKLLKKHCKYRDRPC
SIO_010081: RLO149_RS22600
subclass of: SO_0000673
so part of: RLO149_RS22600
location: complement(12954..14348)
location: region:12954-14348:-1
so has part: feature:12954-14348:-1:exon

WP_013959941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12954-14348:-1:exon

RLO149_RS22605
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
gene: rfbA
locus tag: RLO149_RS22605
old locus tag: RLO149_p630150
so part of: sequence
location: complement(14345..15235)
location: region:14345-15235:-1
so has part: feature:14345-15235:-1:exon
subclass of: SO_0000010

position:14345:-1
position: 14345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15235:-1
position: 15235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14345-15235:-1:exon

RLO149_RS22605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
gene: rfbA
locus tag: RLO149_RS22605
old locus tag: RLO149_p630150
EC number: 2.7.7.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655482.1
GO function: GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-1-phosphate thymidylyltransferase RfbA
translation: MHPPNDHTQTKRKGIILAGGSGTRLYPITLGVSKQLLPIYDKPMIYYPLSVLMLAGIREIAMITTPQDQAQFQRMLGDGSQWGITLTYIVQPSPDGLAQAFILAEEFLAGSPSALVLGDNIFFGHGLPELIAAADTQSVGATVFGYQVTDPERYGVVDFDDNGVVRGIIEKPPVPPSNFAVTGLYFVDGTAPEKAHMVKPSARGEFEITTLLEFYLNEQTLTVKRMGRGYAWLDTGTHHSLLDAGNFVRTIEQRQGQQIGCLEEIAFDLGWITRADLDREAAKYAKNTYGTYLSTL
SIO_010081: RLO149_RS22605
subclass of: SO_0000673
so part of: RLO149_RS22605
location: complement(14345..15235)
location: region:14345-15235:-1
so has part: feature:14345-15235:-1:exon

WP_013959942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14345-15235:-1:exon

RLO149_RS22610
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
gene: rfbD
locus tag: RLO149_RS22610
old locus tag: RLO149_p630160
so part of: sequence
location: complement(15249..16094)
location: region:15249-16094:-1
so has part: feature:15249-16094:-1:exon
subclass of: SO_0000010

position:15249:-1
position: 15249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16094:-1
position: 16094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15249-16094:-1:exon

RLO149_RS22610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
gene: rfbD
locus tag: RLO149_RS22610
old locus tag: RLO149_p630160
EC number: 1.1.1.133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655483.1
GO function: GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-dehydrorhamnose reductase
translation: MKVLVFGQTGQLATELAQFDGVTCLGRRDADLTNPRACEAVIAQADMDVVINAAAYTAVDRSEEDRDTAMIVNAMAPTAMAAAAATRGIPLVHISTDYVFDGSGTTPWKPDDATGPLGVYGSSKLGGEKGITATGGTHAILRTAWVFSAHGTNFVKTMLRLGAERDALNIVADQIGGPTPARDIAAACMRIARALTEDPTKSGTYHFSGAPDVSWANFAREIFAQSGLSVDVTDIPTTAYSTSAKRPANSRLDCRMTTATFGIARPDWRRGLAQVVADLNT
SIO_010081: RLO149_RS22610
subclass of: SO_0000673
so part of: RLO149_RS22610
location: complement(15249..16094)
location: region:15249-16094:-1
so has part: feature:15249-16094:-1:exon

WP_013959943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15249-16094:-1:exon

RLO149_RS22615
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
gene: rfbB
locus tag: RLO149_RS22615
old locus tag: RLO149_p630170
so part of: sequence
location: complement(16091..17167)
location: region:16091-17167:-1
so has part: feature:16091-17167:-1:exon
subclass of: SO_0000010

position:16091:-1
position: 16091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17167:-1
position: 17167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16091-17167:-1:exon

RLO149_RS22615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
gene: rfbB
locus tag: RLO149_RS22615
old locus tag: RLO149_p630170
EC number: 4.2.1.46
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002724808.1
GO function: GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-glucose 4,6-dehydratase
translation: MKLLVTGGAGFIGSAVVRQAIAQGHHVVNFDALTYAACLDNVAHVADDPCYVFEQADIRDRAALDRVFTTHKPDAVMHLAAESHVDRSIDGPGDFIETNITGTYHLLEAARAYWTAQGKPQGFRFHHISTDEVFGSLGETGQFTELTPYDPRSPYSASKAASDHLVCAWGETYGLPILMTNCSNNYGPYHFPEKLIPVVILNALRGAPIPVYGKGENVRDWLYVEDHADALLTVLQNGTVGRSYNIGGKNEAKNIDIVRMICAILDTKRPKTTPSGDKAAEQNRLSYADQITFVTDRPGHDLRYAIDPTRIATELGWRPSVTLSEGLERTVQWYLDNEDWWSALQNRDGVGQRLGARA
SIO_010081: RLO149_RS22615
subclass of: SO_0000673
so part of: RLO149_RS22615
location: complement(16091..17167)
location: region:16091-17167:-1
so has part: feature:16091-17167:-1:exon

WP_044025838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16091-17167:-1:exon

RLO149_RS22620
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
gene: rfbC
locus tag: RLO149_RS22620
old locus tag: RLO149_p630180
so part of: sequence
location: complement(17172..17735)
location: region:17172-17735:-1
so has part: feature:17172-17735:-1:exon
subclass of: SO_0000010

position:17172:-1
position: 17172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17735:-1
position: 17735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17172-17735:-1:exon

RLO149_RS22620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
gene: rfbC
locus tag: RLO149_RS22620
old locus tag: RLO149_p630180
EC number: 5.1.3.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020041597.1
GO function: GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-dehydrorhamnose 3,5-epimerase
translation: MKIKETKLPGIFVLTPHRFSDARGFFSESWSQRAAAEQGFDFKWVQDNHSMSRQPGTVRGLHFQSPPHAQAKLVRCGRGVLFDVAVDIRRGSPTYGQWVGEQLSFENGKQLLIPAGFLHGFATQAPNTEIIYKCSDYYAPDLDRGIRFDCLQIGIDWGLGNLEPILSKKDATAPSLADFHSPFVYEE
SIO_010081: RLO149_RS22620
subclass of: SO_0000673
so part of: RLO149_RS22620
location: complement(17172..17735)
location: region:17172-17735:-1
so has part: feature:17172-17735:-1:exon

WP_013959945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17172-17735:-1:exon

RLO149_RS22625
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
gene: galE
locus tag: RLO149_RS22625
old locus tag: RLO149_p630190
so part of: sequence
location: complement(17953..18936)
location: region:17953-18936:-1
so has part: feature:17953-18936:-1:exon
subclass of: SO_0000010

position:17953:-1
position: 17953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18936:-1
position: 18936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17953-18936:-1:exon

RLO149_RS22625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
gene: galE
locus tag: RLO149_RS22625
old locus tag: RLO149_p630190
EC number: 5.1.3.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011453091.1
GO function: GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO process: GO:0006012 - galactose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-glucose 4-epimerase GalE
translation: MKILITGGAGYVGSACLRYVAEQGHEVMAYDNLTMGHAQAVEGHPIVQGDIADTELLTNTLRDFGADAVMHFAAATYVGESVQNPELYYRNNVGGTLSLLNAMRAADVPRMLFSSTCAAYGMADSDTMSEATPLDPFSPYARTKLAAEWMIRDFAHAYDMGFTLLRYFNASGADANGRHGEDHTPESHLIPLVLQVPLSQRNKIMVFGEDYPTPDGTCIRDYVHTHDLASAHLLAIEATEVGTDEVFNIGTGIGQSVMQIIEACERVAGQSIAREVVARRPGDPPKLVADPTKIKTKLGWEPQYTDIDANIATAWAWHKARPNGYHG
SIO_010081: RLO149_RS22625
subclass of: SO_0000673
so part of: RLO149_RS22625
location: complement(17953..18936)
location: region:17953-18936:-1
so has part: feature:17953-18936:-1:exon

WP_013959946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17953-18936:-1:exon

RLO149_RS22630
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22630
old locus tag: RLO149_p630200
pseudo: true
so part of: sequence
location: 19170..20172
location: region:19170-20172:1
so has part: feature:19170-20172:1:exon
subclass of: SO_0000010

position:19170:1
position: 19170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20172:1
position: 20172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19170-20172:1:exon

RLO149_RS22630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22630
old locus tag: RLO149_p630200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019965822.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase family protein
SIO_010081: RLO149_RS22630
subclass of: SO_0000673
so part of: RLO149_RS22630
location: 19170..20172
location: region:19170-20172:1
so has part: feature:19170-20172:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19170-20172:1:exon

RLO149_RS22635
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22635
old locus tag: RLO149_p630220
so part of: sequence
location: 20728..22440
location: region:20728-22440:1
so has part: feature:20728-22440:1:exon
subclass of: SO_0000010

position:20728:1
position: 20728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22440:1
position: 22440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20728-22440:1:exon

RLO149_RS22635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22635
old locus tag: RLO149_p630220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009825185.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional sulfate adenylyltransferase/adenylylsulfate kinase
translation: MNALNLAPIPELYVSYESAQKLKTEAGNLISWDLTPRQICDLELLMNGGFNPLKGFLSEADYNSVVDTMRTTDGALWPMPINLDVDEKFAEGLEIGQDIALRDQEGVILATMTVTDRWEPNKAHEAEKVFGADDSAHPAVNYLHNHVGKIYLGGPVTGIQQPVHYDFRARRDTPNELRAYFRKVGWRKVVAFQTRNPLHRAHQELTFRAAREAQANLLIHPVVGMTKPGDVDHFTRVRCYEAVLDKYPAATTSMSLLNLAMRMAGPREAVWHGLIRKNHGCTHFIVGRDHAGPGKNSAGDDFYGPYDAQDMFRAHQEEMGIEMVDFKHMVWVQERAQYEPMDEIKDKDDVTILNISGTELRRRLQEGLEIPEWFSFPEVVTELRRTRPPRNQQGFTVFFTGFSGSGKSTIANALMVKLMEMGGRPVTLLDGDIVRKNLSSELGFSKEHRDLNIRRIGYVASEITKNGGIAICAPIAPYASTRRAVREDVEAFGAFIEVHVATSIEECERRDRKGLYKLAREGKIKEFTGISDPYDVPENPELRVETENVDVDNCAHQVLLKLESMGLIAG
SIO_010081: RLO149_RS22635
subclass of: SO_0000673
so part of: RLO149_RS22635
location: 20728..22440
location: region:20728-22440:1
so has part: feature:20728-22440:1:exon

WP_013959949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20728-22440:1:exon

RLO149_RS22640
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22640
pseudo: true
so part of: sequence
location: 22952..24408
location: region:22952-24408:1
so has part: feature:22952-24408:1:exon
subclass of: SO_0000010

position:22952:1
position: 22952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24408:1
position: 24408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22952-24408:1:exon

RLO149_RS22640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011569549.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1182 family transposase
SIO_010081: RLO149_RS22640
subclass of: SO_0000673
so part of: RLO149_RS22640
location: 22952..24408
location: region:22952-24408:1
so has part: feature:22952-24408:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22952-24408:1:exon

RLO149_RS22650
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22650
old locus tag: RLO149_p630290
so part of: sequence
location: 25247..26458
location: region:25247-26458:1
so has part: feature:25247-26458:1:exon
subclass of: SO_0000010

position:25247:1
position: 25247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26458:1
position: 26458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25247-26458:1:exon

RLO149_RS22650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22650
old locus tag: RLO149_p630290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008229928.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MALHSDRHILIVVENLPVPLDRRVWLEATSLQQAGYEVSVICPMGCGWNKTYEVIDGVHIYRHSEPPEAHSGAVAYAREYLHAMWHWFCLARTVWRRKPFQVIQGCNPPDLIFVLALWYRFWGVSYLFDHHDVCPELYEAKFDKQGLLYKIMLICERLTFATASVSMATNGSFRDIAIRRGKMASEDVFVVRSAPKIDTFLPGPGDPVYRKGAKTVMGYVGVIGQQEGMDLLVQAARHLIKDLNHTDVHFVIAGFGPTLDEVVADAEAQGVGDYFTFTGPLYGPDLLDALNVIDIGVSPDPKNPMNDISTMNKTMEYMTLEKPSVQFDLTEGRVSAGEASLYALPNDPVDFANKLAELIADSARGVEMGKKGRARVLDNLSWTHTTPQLLKAYDRIYAKRSKA
SIO_010081: RLO149_RS22650
subclass of: SO_0000673
so part of: RLO149_RS22650
location: 25247..26458
location: region:25247-26458:1
so has part: feature:25247-26458:1:exon

WP_013959951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25247-26458:1:exon

RLO149_RS22655
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22655
pseudo: true
so part of: sequence
location: complement(26513..27157)
location: region:26513-27157:-1
so has part: feature:26513-27157:-1:exon
subclass of: SO_0000010

position:26513:-1
position: 26513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27157:-1
position: 27157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26513-27157:-1:exon

RLO149_RS22655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22655
inference: COORDINATES: protein motif:HMM:NF024997.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: RLO149_RS22655
subclass of: SO_0000673
so part of: RLO149_RS22655
location: complement(26513..27157)
location: region:26513-27157:-1
so has part: feature:26513-27157:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26513-27157:-1:exon

RLO149_RS22660
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22660
old locus tag: RLO149_p630320
pseudo: true
so part of: sequence
location: complement(27431..28946)
location: region:27431-28946:-1
so has part: feature:27431-28946:-1:exon
subclass of: SO_0000010

position:27431:-1
position: 27431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28946:-1
position: 28946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27431-28946:-1:exon

RLO149_RS22660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22660
old locus tag: RLO149_p630320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612405.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family transposase
SIO_010081: RLO149_RS22660
subclass of: SO_0000673
so part of: RLO149_RS22660
location: complement(27431..28946)
location: region:27431-28946:-1
so has part: feature:27431-28946:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27431-28946:-1:exon

RLO149_RS22665
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
gene: tnpB
locus tag: RLO149_RS22665
old locus tag: RLO149_p630340
pseudo: true
so part of: sequence
location: complement(29002..29394)
location: region:29002-29394:-1
so has part: feature:29002-29394:-1:exon
subclass of: SO_0000010

position:29002:-1
position: 29002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29394:-1
position: 29394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29002-29394:-1:exon

RLO149_RS22665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
gene: tnpB
locus tag: RLO149_RS22665
old locus tag: RLO149_p630340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011970376.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase.; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
SIO_010081: RLO149_RS22665
subclass of: SO_0000673
so part of: RLO149_RS22665
location: complement(29002..29394)
location: region:29002-29394:-1
so has part: feature:29002-29394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29002-29394:-1:exon

RLO149_RS22670
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22670
old locus tag: RLO149_p630350
pseudo: true
so part of: sequence
location: complement(<29420..29644)
location: region:29420-29644:-1
so has part: feature:29420-29644:-1:exon
subclass of: SO_0000010

position:29420:-1
position: 29420
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:29644:-1
position: 29644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29420-29644:-1:exon

RLO149_RS22670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22670
old locus tag: RLO149_p630350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053446.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: RLO149_RS22670
subclass of: SO_0000673
so part of: RLO149_RS22670
location: complement(<29420..29644)
location: region:29420-29644:-1
so has part: feature:29420-29644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29420-29644:-1:exon

RLO149_RS22675
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22675
old locus tag: RLO149_p630360
pseudo: true
so part of: sequence
location: <29782..30093
location: region:29782-30093:1
so has part: feature:29782-30093:1:exon
subclass of: SO_0000010

position:29782:1
position: 29782
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:30093:1
position: 30093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29782-30093:1:exon

RLO149_RS22675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22675
old locus tag: RLO149_p630360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611519.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase core domain-containing protein
SIO_010081: RLO149_RS22675
subclass of: SO_0000673
so part of: RLO149_RS22675
location: <29782..30093
location: region:29782-30093:1
so has part: feature:29782-30093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29782-30093:1:exon

RLO149_RS22680
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22680
old locus tag: RLO149_p630370
so part of: sequence
location: complement(30326..31492)
location: region:30326-31492:-1
so has part: feature:30326-31492:-1:exon
subclass of: SO_0000010

position:30326:-1
position: 30326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31492:-1
position: 31492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30326-31492:-1:exon

RLO149_RS22680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22680
old locus tag: RLO149_p630370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008994567.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide sugar dehydrogenase
translation: MKIAVLGLGYVGLSNAALLAQNHDVIGIDLNVERLAAVNAGQSPIQDTELAAFLADKDLRLTTSTDSDTALREADVVIIATPTDYDPKTNYFNTSSVDTVAERALKMSETSTVVVKSTIPVGYIANARAHFDSDRLIFSPEFLREGRALYDNLHPSRIVVGDTGPRGRQFADLLLEGAATSDIPVLLTDPSEAEAIKLFANTYLAMRVAYFNELDSYAMAGGIDSRQIIEGICLDPRIGQHYNNPSFGYGGYCLPKDTKQLLANYAAVPQNLMQAIVDANRTRKDFLSEQILARKPALVGVYRLAMKEGSDNFRQSSIQGIMKRIKAKGIEVILYEPELREPTFYGSKVITDLATFKAQSDIIIANRHAPVLADVSDKIFTRDLFHSD
SIO_010081: RLO149_RS22680
subclass of: SO_0000673
so part of: RLO149_RS22680
location: complement(30326..31492)
location: region:30326-31492:-1
so has part: feature:30326-31492:-1:exon

WP_013959953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30326-31492:-1:exon

RLO149_RS22685
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22685
old locus tag: RLO149_p630380
so part of: sequence
location: complement(31747..32610)
location: region:31747-32610:-1
so has part: feature:31747-32610:-1:exon
subclass of: SO_0000010

position:31747:-1
position: 31747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32610:-1
position: 32610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31747-32610:-1:exon

RLO149_RS22685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22685
old locus tag: RLO149_p630380
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187422.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MSDVAIVIPHYNDVTRLLRCLAALIPQAEAYRAEVIVVDNSSSQSLEPLRVSYPGLRIVTEPLKGAAAARNRGARDTTAAYLFFLDADCVPHPDWLETALNIRSTADVVGGRVSVFDETPAPRSGAEAFETVFAFDNRGYVENKGFSVTANLLTRRDVFEDVGEFVPGLSEDFDWCRRATGKGYSLVYDDTLHVSHPTRSDWAALHRKWQRINAESFGLIGTGVVARITWSLRGLAMPVSIVVHSMRILTTSRLHGMRERAAAFATLARLRIQRCGWMLRQALTGRA
SIO_010081: RLO149_RS22685
subclass of: SO_0000673
so part of: RLO149_RS22685
location: complement(31747..32610)
location: region:31747-32610:-1
so has part: feature:31747-32610:-1:exon

WP_013959954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31747-32610:-1:exon

RLO149_RS22690
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22690
old locus tag: RLO149_p630390
so part of: sequence
location: 32938..33606
location: region:32938-33606:1
so has part: feature:32938-33606:1:exon
subclass of: SO_0000010

position:32938:1
position: 32938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33606:1
position: 33606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32938-33606:1:exon

RLO149_RS22690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22690
old locus tag: RLO149_p630390
inference: COORDINATES: protein motif:HMM:NF039218.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SGNH hydrolase domain-containing protein
translation: MIDHQILDLVAMTAGCPPLLGMIRADRGEGRSVCNQQNSAVIAFLDEASHIKTVVLHARWAIAVEGLRAPSEPGRPALFVPEIGLIETAHFEKNHAYVAQAIQEAIKQLRQRDLEVIIIDTVPEIDRFVPQALFSAHYTGSAMPRAPDLKTTKIRNQRFRASIEPLLEDRNVRSVSPADYLCAPIYLVEKDGKAVYRDDDRLSIWGARFLAPDLMDQAFMFP
SIO_010081: RLO149_RS22690
subclass of: SO_0000673
so part of: RLO149_RS22690
location: 32938..33606
location: region:32938-33606:1
so has part: feature:32938-33606:1:exon

WP_013959955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32938-33606:1:exon

RLO149_RS22695
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22695
old locus tag: RLO149_p630400
so part of: sequence
location: 33842..35635
location: region:33842-35635:1
so has part: feature:33842-35635:1:exon
subclass of: SO_0000010

position:33842:1
position: 33842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35635:1
position: 35635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33842-35635:1:exon

RLO149_RS22695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22695
old locus tag: RLO149_p630400
inference: COORDINATES: protein motif:HMM:NF024627.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: right-handed parallel beta-helix repeat-containing protein
translation: MTISTVSSVNQLYTALSQAQGGDIIQLAPGTYDKIGIWKGLGFDITFDSPVTIRSMDPDNPAVIGELAVRDAGNIVFDGLKFDYDAPVGKSVLDRPFEVTNSDSITIKNSVFEGDIAEGVDIRADGFGTGVGLSVRESSNMTVENNTFFDFYKAVGIGETTGVAFTGNDIHSVRADGLTMVKVVDALIEGNHIHDFKRNLDAGDHADMIQFWTNGTDFPSSNITIRHNLLDIGSGNHTQGIFMRNEAVDSQDGGLDMFYRNITIEDNLLINAHINSIVVGETDGLTINGNILLHSDGEVPRDVGHLENPRIRLSEDSTNVVLTNNVMSSMPGVVARNSEWIVADNTIAQSFNHEANGYYVSAEDFLAEYAPDRMDWLEVMSSKAYPEPVVGNADVPVPGFAYDFSTQYSADFASVLTMDNAVRGDVTYEGDITDGDAFVFDSETGVVVLGKLGDYRDTDEIVVDMKFTLNNSADTGHLFNNHMRLSAAAAEDELILRVATQNEGLKTYKVDDIDLGENTEHHLTVLLDREDDHLQVILNGQVVLEDMTTDFVARDGMHNWGWTLGHKWSDSVDGSVSDFNLSDEAHFTWDADALVFV
SIO_010081: RLO149_RS22695
subclass of: SO_0000673
so part of: RLO149_RS22695
location: 33842..35635
location: region:33842-35635:1
so has part: feature:33842-35635:1:exon

WP_013959956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33842-35635:1:exon

RLO149_RS24395
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS24395
old locus tag: RLO149_p630410
so part of: sequence
location: complement(35659..37116)
location: region:35659-37116:-1
so has part: feature:35659-37116:-1:exon
subclass of: SO_0000010

position:35659:-1
position: 35659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37116:-1
position: 37116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35659-37116:-1:exon

RLO149_RS24395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS24395
old locus tag: RLO149_p630410
inference: COORDINATES: protein motif:HMM:TIGR04099.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DapH/DapD/GlmU-related protein
translation: MGSEKPHKIDKSRSQRIWRLISSTFDPRVWLHGIKVLNYYGHTHVSERRKATLGRDVRISPMASFANAQNLIIKNRARIGANVSLWAGPGRGRIVIGEDTMIGPNVMVTAANYRFNDGSPVTSQAMDESDTIIGDDVWIGHGATILPGAKIGDGAVIGAGAVVRGEVSANAVLAGNPAKVVGSRLIRAAEDTLATVTGPGNVQITALTTADPPAAASVVPGQAKRHYSIDMPQMALSGLSEAWLFKELGDIHWQMITEFLQSPSSALANETGDRLYATFTRLYLEVTPKLRDFQENDMLELSSTLQRYGASFFFGMHDLRAQGAGCRAQTMSTFAKYGERGKNTSLIKGTPTLVDPDSVPSVAEFPAFGIQYRDRRGTEPAEAIFECEYEILPSHDINGVGLLYFAAYPTIFDLCFEKFEGKGFLIDYSTVSKDLYYYTNSEPTETLIFRVHSREEDKETIRHTASLSRKGDGKRMGEVISVKRR
SIO_010081: RLO149_RS24395
subclass of: SO_0000673
so part of: RLO149_RS24395
location: complement(35659..37116)
location: region:35659-37116:-1
so has part: feature:35659-37116:-1:exon

WP_148264532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35659-37116:-1:exon

RLO149_RS23005
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS23005
old locus tag: RLO149_p630420
so part of: sequence
location: complement(37165..38160)
location: region:37165-38160:-1
so has part: feature:37165-38160:-1:exon
subclass of: SO_0000010

position:37165:-1
position: 37165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38160:-1
position: 38160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37165-38160:-1:exon

RLO149_RS23005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS23005
old locus tag: RLO149_p630420
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSWLWPTLIPQMLEREDDVRLVGVGSLLSRNLDLVLGRKIIFGTGSGYSSPPSPEQAKAWKVYCVRGPLTAGLMGLDPSLAVTDGAWLINQIPQYASLPTDRHGTVFVPHWTSAKFGNWDPVCTAAGVHLVDPLWDCARVFSDIANAELALVESLHGAIIADYYRTPWIPVVSPSRILKFKWLDWCGSLGLDYAPYELPPSDYVDCLIQRTSPNSVNTNIHQIEVPADTYDVVQTAPPPRKAGATYFAKRRLKSRLRTVRNYGIDRLADMRNGKLFSSWNRQHTDRMAAYFTKLQHQSPYLSADDVRSAKIEGLNIALEKMQRDFEKGLI
SIO_010081: RLO149_RS23005
subclass of: SO_0000673
so part of: RLO149_RS23005
location: complement(37165..38160)
location: region:37165-38160:-1
so has part: feature:37165-38160:-1:exon

WP_013959958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37165-38160:-1:exon

RLO149_RS22710
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22710
old locus tag: RLO149_p630430
so part of: sequence
location: 38513..39751
location: region:38513-39751:1
so has part: feature:38513-39751:1:exon
subclass of: SO_0000010

position:38513:1
position: 38513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39751:1
position: 39751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38513-39751:1:exon

RLO149_RS22710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22710
old locus tag: RLO149_p630430
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF012744.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MPDTLRIVIIAPSLDGNDLSEPEWAYRWVEALSRMADVTCLASSRIGAVPLAEQLPRARVVTWPEIPFLYRKLERFNAQVKPALPLFHAQARRWIKHAQRNGETFHIGHQILPQGMRHTTPLRNLGFPYVVGPLGGGLKTPAGFEKEVQATSSISARLRQIDDVRLSYDPFLRAGYAGADLVLGVAPYVVARLAPVGIRRFHALPERGYGNFAPERTRQSEVGTLTLFHAGRTIRTKGLRDTVRAMARLRDLPNVRLVSAGDGEDLTNCRAEADRLGVADRITFLGKIPREKVEEYYAASDVFCFPSFREPMGGVFFEAMAHGLPIVTAANGGPDFLIDDTSGIRVPVTTPDDFANGIAEAVRALAMDPALRLKLGQGSRERLHSFGSWDDKAELMLSFYRDIIARRAEGMT
SIO_010081: RLO149_RS22710
subclass of: SO_0000673
so part of: RLO149_RS22710
location: 38513..39751
location: region:38513-39751:1
so has part: feature:38513-39751:1:exon

WP_013959959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38513-39751:1:exon

RLO149_RS22715
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22715
old locus tag: RLO149_p630440
so part of: sequence
location: 39748..40677
location: region:39748-40677:1
so has part: feature:39748-40677:1:exon
subclass of: SO_0000010

position:39748:1
position: 39748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40677:1
position: 40677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39748-40677:1:exon

RLO149_RS22715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22715
old locus tag: RLO149_p630440
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF025025.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MSDPRPDLSIVIVEWNTIDMLRDCLASVFDKAGGLDIQVIVVDNASSDGSPEMVEAEFPQVTQIRNADNRGFAAANNQGFEICTGRYILLLNSDTYLLDDVMGASLRYLDNHSTVGAMGCLVLNPDRTMQRTCSMWPRLLDLMFMSSGLWKLKRPKVFGRYQMTHWQRNDERAVEVISGCYMMLRREVLEQVGQLDEDFFFFGEETDWCRRMRDAGWLLMFAPVGKIVHYGSASARKLNHKRDLMLTDATVRLHRKHSGRLAGSAAWVTLFGFNVSRATFWSLRSVVQHDRAALRAKHFRNVVIGMIRP
SIO_010081: RLO149_RS22715
subclass of: SO_0000673
so part of: RLO149_RS22715
location: 39748..40677
location: region:39748-40677:1
so has part: feature:39748-40677:1:exon

WP_013959960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39748-40677:1:exon

RLO149_RS22720
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22720
old locus tag: RLO149_p630450
so part of: sequence
location: 40696..41511
location: region:40696-41511:1
so has part: feature:40696-41511:1:exon
subclass of: SO_0000010

position:40696:1
position: 40696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41511:1
position: 41511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40696-41511:1:exon

RLO149_RS22720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22720
old locus tag: RLO149_p630450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRPKRIHVVGSSPRSGTTLAFELLTSCFDIDKFGKHEISLFEYPKEASANYASKKPTDLIHVKRLLAWDKKMHCLYMDRDPRDIVVSQHGSRIGEYWCDFPQWRRNERLIAHLRDHPRIHICRYEDLVMNPDHEQDLILARFPFLAKVHSFSNFEKVSQSSEAAQKALKGVRKISAKSVGTWRSDLPRVAAQLRAHPDMAEAVVAAGYAKDTSWTTACDGVDPDEAQSIRAQYAALRNKRGGALVWGRVQRRLRSFAQEARYALRNSLYR
SIO_010081: RLO149_RS22720
subclass of: SO_0000673
so part of: RLO149_RS22720
location: 40696..41511
location: region:40696-41511:1
so has part: feature:40696-41511:1:exon

WP_013959961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40696-41511:1:exon

RLO149_RS22725
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22725
old locus tag: RLO149_p630460
so part of: sequence
location: complement(41635..42237)
location: region:41635-42237:-1
so has part: feature:41635-42237:-1:exon
subclass of: SO_0000010

position:41635:-1
position: 41635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42237:-1
position: 42237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41635-42237:-1:exon

RLO149_RS22725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22725
old locus tag: RLO149_p630460
inference: COORDINATES: protein motif:HMM:NF036807.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfotransferase
translation: MSQKIFGIGFHKTGTTSFGEALKELGYNVTGPNWIYHGNIARTYLPRCRALSHDFNAFQDNPWPLVYREMDAMWPKAKFVLTLRDPQKWIASQTRHFSRDTTPMRKFIYGADKGHPSGNEAHYIATYKRHNSNVRTYFEGRPDKLLELDFENPVDWAPLCAFLGKPVPDTPFPHTNPAGTDRSVSLRTKLRRKIRTLFSV
SIO_010081: RLO149_RS22725
subclass of: SO_0000673
so part of: RLO149_RS22725
location: complement(41635..42237)
location: region:41635-42237:-1
so has part: feature:41635-42237:-1:exon

WP_013959962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41635-42237:-1:exon

RLO149_RS22730
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22730
old locus tag: RLO149_p630470
so part of: sequence
location: complement(42256..44055)
location: region:42256-44055:-1
so has part: feature:42256-44055:-1:exon
subclass of: SO_0000010

position:42256:-1
position: 42256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44055:-1
position: 44055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42256-44055:-1:exon

RLO149_RS22730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22730
old locus tag: RLO149_p630470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017942192.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MERLEMLQNYRLVWGILSRRERGQFILLIVMSILMALFEVVGVAAILPFLAMIGDPSIIETNVAIALFARVIGSTDVKQITVAFGFTVLAMLVLGMAVRALGTYGQVRFSMMRAFTIATRLLRVYLRQPYVWFLTQNTSEFGQSLLSEIDMVVRQSILPAVLLVSNITITILIVAVLFITEPAVALGAFGLLGGVYVLIYFALRKRLDLVGKERIDFNKERFRTVQEIGGGIKEIKVMGLEDIALSRFHGPAFGMARTQSAANVMGKIPRFALEAVIYGGFILMVLFMLIVKERQIEELLPLFGLLGLSSIKLFPALQTIYAQLSLIRFTAPALTRLHCDVTTLSIPPVTPEGAPIRLNKVLEISDLHFRYPESDRSTLHGISTTIAARSTVGIVGGTGAGKTTVVDLILGLLAPTEGEIRVDGTPITPERRRDWQKTLGYVPQTIFLIDDTVAANIAFGVPPEKVDMAAIEAAARTANLHEFVLNNLPEGYNTRVGERGVRLSGGQRQRIGIARALYFDPDVLVLDEATSALDNLTEKTVMEAVDNLAGAKTIIMIAHRLSTVQNCDTILLLSHGKIVAEGHYKALMQNEEFRRMANT
SIO_010081: RLO149_RS22730
subclass of: SO_0000673
so part of: RLO149_RS22730
location: complement(42256..44055)
location: region:42256-44055:-1
so has part: feature:42256-44055:-1:exon

WP_245538203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42256-44055:-1:exon

RLO149_RS22735
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22735
old locus tag: RLO149_p630480
so part of: sequence
location: 44135..45082
location: region:44135-45082:1
so has part: feature:44135-45082:1:exon
subclass of: SO_0000010

position:44135:1
position: 44135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45082:1
position: 45082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44135-45082:1:exon

RLO149_RS22735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22735
old locus tag: RLO149_p630480
inference: COORDINATES: protein motif:HMM:NF021616.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MKYGDLISVVVPVYNRAHEVVRSVGSICAQSYQNLEILIVDDCSTDDIEGAVTDLKDSRVRLVRREKNGGAAAARNSGLAAATGDLVAFMDSDDISLFDRFAQEMALFCSLPEDYIGVYAAAIAHTDTTEDARAQAAARVLPPIHRRPLSGNLFDATLEGNFIDMPTMLLKKSAVLAAGPFDERLRNNVDWDFTLRLTRQGKFGFVPQPLYVFSYVPRVASGNDHISHNPRYSVLSYAYITGKLRRAGHVGPALARHYAAAGSYLMRAERPKFARRYFAAARKITPNDPRLLAHLVLSHMPRIHRWARGRSTRFH
SIO_010081: RLO149_RS22735
subclass of: SO_0000673
so part of: RLO149_RS22735
location: 44135..45082
location: region:44135-45082:1
so has part: feature:44135-45082:1:exon

WP_013959964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44135-45082:1:exon

RLO149_RS23010
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS23010
old locus tag: RLO149_p630500
so part of: sequence
location: 45614..47485
location: region:45614-47485:1
so has part: feature:45614-47485:1:exon
subclass of: SO_0000010

position:45614:1
position: 45614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47485:1
position: 47485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45614-47485:1:exon

RLO149_RS23010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS23010
old locus tag: RLO149_p630500
EC number: 2.3.1.-
inference: COORDINATES: protein motif:HMM:NF013884.2
GO function: GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase family protein
translation: MKYRPEIDGLRSIAVLAVLFFHLGVPGITGGFTGVDIFFVISGYLITSILMRDLEAERVDLVQFYRRRALRILPGLFAVLIATIALSVFILLPSEMAVLGRSIIAALLFVSNIFFWSELDYFTPDAKENPLLHTWSLGVEEQFYILVPVAMWLVYRYARRFLLPLFTLSVLVSFVLSVYAVEPMPRASFYLLPTRYWELGAGSLLAISGARNASHRLVANGLAAFGLACIAAGLFWLTPNSVFPGPAALLPVTGAVALIAAGRNNFAGRLLSTSGPVWIGKISYSLYLWHWPLIVLWKLRTDPYLSAVEMLTLGLVSIIVAALSTRYVEQPFRKLPSQLSNRRVLWPASAALVLGAAAGWGLIQNPQALRNYPARVVALDAYADYFDRPEFRARWQYHKCHLDPRSGGFKAYDSANCLAADTRPLVLVFGDSHAAHIWGGIAAARPDLNVVQASSTNCRPLPNHAPTTFCHKLSAFIYDEWVPQTQPRTVVLSGVWRDSELPELAAGIVKMRDSGVARVVVLGDTVTYAATLPRILARAALQGREETVQLQNHLRPGQWQRDEVLRAIVTQAGGEHIDLLSQVCPTGPDSCQAWVEGVPLLFDSNHYTTEGAALMGRAISAGL
SIO_010081: RLO149_RS23010
subclass of: SO_0000673
so part of: RLO149_RS23010
location: 45614..47485
location: region:45614-47485:1
so has part: feature:45614-47485:1:exon

WP_013959966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45614-47485:1:exon

RLO149_RS22745
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22745
old locus tag: RLO149_p630510
so part of: sequence
location: 47744..48892
location: region:47744-48892:1
so has part: feature:47744-48892:1:exon
subclass of: SO_0000010

position:47744:1
position: 47744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48892:1
position: 48892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47744-48892:1:exon

RLO149_RS22745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22745
old locus tag: RLO149_p630510
inference: COORDINATES: protein motif:HMM:NF024627.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: right-handed parallel beta-helix repeat-containing protein
translation: MAQAGDVLVLQGGEYGILALWPKGKVDPRFPGPVTLRSKDSQQPAIFTGLRLNDAQNMVFQQILFDYRATSGSFKERPFEIKNARNIVITDSVFDGDNAHGTGIRGDGYGAGLGLSIRNSNDIRIENNMFKNFYRGLTMGSGNGNIVRGNDLSGMRSDGMNFVKVTNLLIENNYVHDFRRNMEARDHADMIQFWTNGAETPTTDIIIRGNVLNIGAGDHTQSLFMRNEAVDSQGKGRAMFYRNILIEDNVIINGHLHGISIGETDGLTIRNNTLIRAPRRGQIPPPSGRGPKHWMPRIKVADKSVNVTLQNNVAPAIRVTGQRWRVVGNLAIQDMSLMQPGHYTRVFENGLAAAPYALDNFRTRAGGEADQAGLGATRLQEN
SIO_010081: RLO149_RS22745
subclass of: SO_0000673
so part of: RLO149_RS22745
location: 47744..48892
location: region:47744-48892:1
so has part: feature:47744-48892:1:exon

WP_044025832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47744-48892:1:exon

RLO149_RS22750
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22750
old locus tag: RLO149_p630520
so part of: sequence
location: 49205..50344
location: region:49205-50344:1
so has part: feature:49205-50344:1:exon
subclass of: SO_0000010

position:49205:1
position: 49205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50344:1
position: 50344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49205-50344:1:exon

RLO149_RS22750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22750
old locus tag: RLO149_p630520
inference: COORDINATES: protein motif:HMM:NF016800.2
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: O-antigen ligase family protein
translation: MVIENSGSTSMEFLGGYMVARACIRDKESFLGFCKAWSLLVALTIIPVLIEQVTGNAILMTIADAIPGVRSPSDNNNTRWGLERVQVVFAHPILYGLVCSTAVPLTYVALQGQLAGPQRVFRTGIIALCTFFALSSGALLAMLLQFFMIGWSWAFARMQARWTLLLIMVILAYITVDLISTRTPMRVFLTYATFSAQTAYTRLYIFEWGMVNVWANPIFGLGFQDWVRPRFMGSSVDNFWLLTAMRYGIPGFTFLASGYFILIWKVGRKVFDKDTTLLLLRRGWVFTLVGVCFTLATVHIWSAPFSLFAFLLGSGVWFLEQNPESEAVLDVSNATESLRRHPVYARVLPLQKQMHLKPQETTTRLKDRRYMRIPTSNRK
SIO_010081: RLO149_RS22750
subclass of: SO_0000673
so part of: RLO149_RS22750
location: 49205..50344
location: region:49205-50344:1
so has part: feature:49205-50344:1:exon

WP_217517521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49205-50344:1:exon

RLO149_RS23415
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS23415
pseudo: true
so part of: sequence
location: <50717..50914
location: region:50717-50914:1
so has part: feature:50717-50914:1:exon
subclass of: SO_0000010

position:50717:1
position: 50717
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:50914:1
position: 50914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50717-50914:1:exon

RLO149_RS23415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS23415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611156.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: RLO149_RS23415
subclass of: SO_0000673
so part of: RLO149_RS23415
location: <50717..50914
location: region:50717-50914:1
so has part: feature:50717-50914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50717-50914:1:exon

RLO149_RS22755
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
gene: tnpA
locus tag: RLO149_RS22755
old locus tag: RLO149_p630530
so part of: sequence
location: complement(50886..51134)
location: region:50886-51134:-1
so has part: feature:50886-51134:-1:exon
subclass of: SO_0000010

position:50886:-1
position: 50886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51134:-1
position: 51134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50886-51134:-1:exon

RLO149_RS22755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
gene: tnpA
locus tag: RLO149_RS22755
old locus tag: RLO149_p630530
inference: COORDINATES: protein motif:HMM:NF033573.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS200/IS605 family transposase
translation: MGRHCVYYHLVWSTKYSHKVLQGDIKLRVRDICRQVCEQSGVEIIRGVLSSDHVHTFVSVPPKLAISDLKRFDINLRHILQP
SIO_010081: RLO149_RS22755
subclass of: SO_0000673
so part of: RLO149_RS22755
location: complement(50886..51134)
location: region:50886-51134:-1
so has part: feature:50886-51134:-1:exon

WP_245538204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50886-51134:-1:exon

RLO149_RS22760
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22760
old locus tag: RLO149_p630540
so part of: sequence
location: complement(51222..51917)
location: region:51222-51917:-1
so has part: feature:51222-51917:-1:exon
subclass of: SO_0000010

position:51222:-1
position: 51222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51917:-1
position: 51917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51222-51917:-1:exon

RLO149_RS22760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22760
old locus tag: RLO149_p630540
inference: COORDINATES: protein motif:HMM:NF014453.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar transferase
translation: MTLHFAPHVVEIKEQSQQIQKPEVASGPVTGVYRDKIKRFSDVVATLIIIPIISPVIALMALIIAFDGHSPLYSQLRVGKNARTFRIWKLRTMIYDADDLLEAHLAENPEARAEWDRTQKLKHDPRITFVGRVLRKTSIDELPQLLNVLNGTMSLVGPRPMMVCQKAAYPGKGYYRLRPGITGPWQVSDRNKVSFSDRARYDDAYYQDVSFKTDILLLLRTVLVVLRGTGY
SIO_010081: RLO149_RS22760
subclass of: SO_0000673
so part of: RLO149_RS22760
location: complement(51222..51917)
location: region:51222-51917:-1
so has part: feature:51222-51917:-1:exon

WP_044025833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51222-51917:-1:exon

RLO149_RS22765
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22765
old locus tag: RLO149_p630550
so part of: sequence
location: 52528..53280
location: region:52528-53280:1
so has part: feature:52528-53280:1:exon
subclass of: SO_0000010

position:52528:1
position: 52528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53280:1
position: 53280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52528-53280:1:exon

RLO149_RS22765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22765
old locus tag: RLO149_p630550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013959971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTHAPLTMLTGEVGMGKTMLLQALLRKVDDDITLGLVSNAQGDRGDLLRWVLNALDVALPSETDYVSLFQHFQNFVVSEYAAGRHVVLIIDEAQNLGAEMLEELRMLTNINSGKDELLQIILAGQPELRDLISRPELRQFAQRVTATYHLAPFSRADSVAYIKHRLQRVGGTGDEITAPALSHIHLEAEGIPRSINKLCDLALVYAASAGNTVVGKPILNELIRDGLILKPAPPLLVLTDRVDLPEKAAE
SIO_010081: RLO149_RS22765
subclass of: SO_0000673
so part of: RLO149_RS22765
location: 52528..53280
location: region:52528-53280:1
so has part: feature:52528-53280:1:exon

WP_245538205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52528-53280:1:exon

RLO149_RS22770
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22770
old locus tag: RLO149_p630560
so part of: sequence
location: 53277..54824
location: region:53277-54824:1
so has part: feature:53277-54824:1:exon
subclass of: SO_0000010

position:53277:1
position: 53277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54824:1
position: 54824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53277-54824:1:exon

RLO149_RS22770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22770
old locus tag: RLO149_p630560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013959972.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chain-length determining protein
translation: MNLDIAFYWKLLVRRMPVMMLFVLLGSGLGVITALKLPETWSTEARLLVEAPQIPDEMVRSTIQTDALEQLDIIQERLLTRANLIDIANRLNVFEHIGEMDPDQVELAMRQATQIRRSEGRNQATILRIVFEARSGRIAAAVVNEYVTIVLDENASFRISRAANTLQFFQQEVQRMEEELAMQSARISQFKSDNVAALPENQSYRLGRQTLLQERLERLESERSIYEAQREDILKVYEATGEVRQRENQRTLTADEQRLRNVEAELNQELLRYSETHPNIIRLRALVERIETSIAADQAATLTPEEDISVEDPVLTATLAEIDTRLDFIERDIATTTTELEQLQQAITRSSSNGIILNGLEREYGIIESRYNAAVLNLNASQMSERIETTAQGQRITIIESATIPNVPTGPNRPLIAIAGAAAGIGLASVYFVLLELLNRTIRRPAELMSRFDITLIATIPYMESPRRRFIRRASIIGATMFVLISVPLALWYIDTNYLSLELIVQKGLSRLGLG
SIO_010081: RLO149_RS22770
subclass of: SO_0000673
so part of: RLO149_RS22770
location: 53277..54824
location: region:53277-54824:1
so has part: feature:53277-54824:1:exon

WP_013959972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53277-54824:1:exon

RLO149_RS22775
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22775
old locus tag: RLO149_p630570
so part of: sequence
location: 54843..55664
location: region:54843-55664:1
so has part: feature:54843-55664:1:exon
subclass of: SO_0000010

position:54843:1
position: 54843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55664:1
position: 55664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54843-55664:1:exon

RLO149_RS22775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22775
old locus tag: RLO149_p630570
EC number: 2.7.10.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655486.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004715 - non-membrane spanning protein tyrosine kinase activity [Evidence IEA]; GO:0004713 - protein tyrosine kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CpsD/CapB family tyrosine-protein kinase
translation: MEKLQAALEKAREARNPTSPMAHQTHYDGTSRTKKNKGLQTDLWEALTPIDVSDQHLSKHRVVTRQAGPSAAPFDILRTKVLLQMRQNGWKRLAITSPMPNSGKTTTACNLALGLGRQKDLRAILMDLDLRDPSVHSFFRATPSHGIGDLLAGRVEFNDQALRIGDNVAVSMSLAAEGDPTRLLLAEETADIINHIEREYKPDIMVFDLPSVLVNDDTRAFLKNVDCALIVARTNSTRYSQFDTCEREIAEQTNVLGTILNAYLNVGTVSEQR
SIO_010081: RLO149_RS22775
subclass of: SO_0000673
so part of: RLO149_RS22775
location: 54843..55664
location: region:54843-55664:1
so has part: feature:54843-55664:1:exon

WP_013959973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54843-55664:1:exon

RLO149_RS22785
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22785
old locus tag: RLO149_p630590
so part of: sequence
location: complement(56139..56432)
location: region:56139-56432:-1
so has part: feature:56139-56432:-1:exon
subclass of: SO_0000010

position:56139:-1
position: 56139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56432:-1
position: 56432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56139-56432:-1:exon

RLO149_RS22785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22785
old locus tag: RLO149_p630590
inference: COORDINATES: protein motif:HMM:NF013677.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MSKRKQHHPEFKVKVALGALKGEEEVSELASRAGVHPTMIHQWKRALLEGASGVFECGVWKAPEVDEGRAEDLHAKIGELAVANDFLSRKLKPWTGK
SIO_010081: RLO149_RS22785
subclass of: SO_0000673
so part of: RLO149_RS22785
location: complement(56139..56432)
location: region:56139-56432:-1
so has part: feature:56139-56432:-1:exon

WP_013959974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56139-56432:-1:exon

RLO149_RS22790
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22790
old locus tag: RLO149_p630600
so part of: sequence
location: 56745..59165
location: region:56745-59165:1
so has part: feature:56745-59165:1:exon
subclass of: SO_0000010

position:56745:1
position: 56745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59165:1
position: 59165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56745-59165:1:exon

RLO149_RS22790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22790
old locus tag: RLO149_p630600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655490.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MFKSVPIILVIAMALSACKSSEERAEEYYQSGLKLIESGDYERGMVELRNVFEFDGSHREARSLLATTLLEQENNIHGAYGQFLRLAEQYPDDAETRILLSEMAFNGANWEELERHGTRAVELAPDDTRAKAIAIALAYRTASLANDDPARREQARAAQDLLGALPDNVMLRKLVLDALLLNGDMTQALIELDWLLEREPENMLYWRQRLNILSQNDDMEGIETQLLGMVERFPEDVETKQMLLRFYLSREENDKAEAFLRQLADRAAPDDNAPLADLVNYLLQTQGPEAALAELDAAIVEEEDPVPFQTIRAGIIFAQGETTEAIMELEGVLEGAEPSEQTNDIKVALASMMLSTGNEVGARAQVEEVLVADEGHPAALKMQASWQIRADEAEAAINNLRLAQDRAPEDAQTMSLMAEAYARSGRPELSQDFLALAVEASGNAPAESLRYAQLLIEQERYLPAEDTLLPALRLAPRNVDLLAALGNLYLRMEDMGRTEQVVNTLRGIETPAAQQASTRLEAQLISVRNGVEDAISYIEGIASSDDATLNSQVELLRVRLGTGDVDGALLLAEELNAENPDNLALRAIAASVEAAAGNPEGAAAIYREVVTAEPQAANVWLELARVTQRLEGDTSASAIVDEALAAAPDNGNLLWASASYKERAGDIDGAIEIYESLYARDSSSVIVANNLASMLTTYRTDEASLDRAWAVARRFRDTEIPALQDTFGWILHRRGESEEALPYLEGAAQGLPNDPLVQYHLGKAYEALERPEDALAQFRKVVQIAGPGDQREQVIEARNLIAATEN
SIO_010081: RLO149_RS22790
subclass of: SO_0000673
so part of: RLO149_RS22790
location: 56745..59165
location: region:56745-59165:1
so has part: feature:56745-59165:1:exon

WP_245538206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56745-59165:1:exon

RLO149_RS22795
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22795
old locus tag: RLO149_p630610
so part of: sequence
location: 59363..59968
location: region:59363-59968:1
so has part: feature:59363-59968:1:exon
subclass of: SO_0000010

position:59363:1
position: 59363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59968:1
position: 59968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59363-59968:1:exon

RLO149_RS22795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22795
old locus tag: RLO149_p630610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655491.1
GO component: GO:0016020 - membrane [Evidence IEA]; GO:0042597 - periplasmic space [Evidence IEA]
GO function: GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide biosynthesis/export family protein
translation: MQNVKNILMGLVLVLVASMAQAQSEYRVQPGDGLNIEVLEDASLNRSVIVLPDGRFNFPFAGTVRASGRTAVQIQSDVTTAIQSNFANPPTVFVSVIPSASNVQEATDSDMIDVYFLGEVNTPGLLEVKPGTTLLQAIAVGGGVTRFAAVKRIQLRRTNRQTGVQNVVTLNYKALANGTASNVIELKDGDVILVPERRLFE
SIO_010081: RLO149_RS22795
subclass of: SO_0000673
so part of: RLO149_RS22795
location: 59363..59968
location: region:59363-59968:1
so has part: feature:59363-59968:1:exon

WP_044025835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59363-59968:1:exon

RLO149_RS22800
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22800
old locus tag: RLO149_p630620
so part of: sequence
location: 59991..61361
location: region:59991-61361:1
so has part: feature:59991-61361:1:exon
subclass of: SO_0000010

position:59991:1
position: 59991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61361:1
position: 61361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59991-61361:1:exon

RLO149_RS22800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22800
old locus tag: RLO149_p630620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655492.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTGRARHKVGAFAALCGIGIAAHAQEALPPGITASFDVTQRLEYSDNPDLEVEDDPDFFGRTILAFDLESATPLENFTLSLGTDIEEGRNDRSSVDLTNSFVRLGYDRATRNANIGTSLRYRESDTSSSFFDDDFDTDGRIINQDSGTRQNYGFGLTGAVGVEAPIGASFSLDYSELRYSGTEDPDLTDRSTLDTSAQINFRIDPRIIARLTTKYRDFDAQGNGTSRETTGFGAGVELEFSPTLSGDFAASYDSIERSGDETGTDDGVSFSAGLTQDLTNGTIGATFSSDVSSNDDGRRSFFTIDRTMDLSKRAALSYSLGGTSSETSSFEPLVNVDYSYALPTGQLTFGMSQRVNTDSDNQEQVNTTLNAGYQQQINSLSSIGADFSLFDRNELGEFADDGRRVSLSLSYQYALTRDWGLVSGVSHTLSTSDNEADRSSNTVFIGLQRNFSWNP
SIO_010081: RLO149_RS22800
subclass of: SO_0000673
so part of: RLO149_RS22800
location: 59991..61361
location: region:59991-61361:1
so has part: feature:59991-61361:1:exon

WP_245538207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59991-61361:1:exon

RLO149_RS22805
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22805
old locus tag: RLO149_p630630
so part of: sequence
location: 61519..62094
location: region:61519-62094:1
so has part: feature:61519-62094:1:exon
subclass of: SO_0000010

position:61519:1
position: 61519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62094:1
position: 62094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61519-62094:1:exon

RLO149_RS22805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22805
old locus tag: RLO149_p630630
EC number: 3.4.21.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012180042.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhomboid family intramembrane serine protease
translation: MQLSDLGLVQPERLRGMAYEYGGFWPGLLKDWNPNYTLQSYAMFVTYGFLHGGLIHLIVNMITLWSLGAAVILRVGLRGFSILYIASIFGGGAGYAVLAAGLQPMVGASGALFGLAGGLLAWMYVDRFTFQQGLLPVAQAVALLIALNMTMWWAMSGQLAWQTHFGGFVTGWITAMLIDPRPLYPEDKGGA
SIO_010081: RLO149_RS22805
subclass of: SO_0000673
so part of: RLO149_RS22805
location: 61519..62094
location: region:61519-62094:1
so has part: feature:61519-62094:1:exon

WP_245538208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61519-62094:1:exon

RLO149_RS22810
type: Gene
subclass of: SO_0000704
RO_0002162: 391595
locus tag: RLO149_RS22810
old locus tag: RLO149_p630640
so part of: sequence
location: complement(62136..63152)
location: region:62136-63152:-1
so has part: feature:62136-63152:-1:exon
subclass of: SO_0000010

position:62136:-1
position: 62136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63152:-1
position: 63152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62136-63152:-1:exon

RLO149_RS22810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 391595
locus tag: RLO149_RS22810
old locus tag: RLO149_p630640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655513.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MSGANPTGSAMGQPIGQSDFFVCDFFAAVPKHDLAAMEHPLFSLSTRPDRRILNYTHNDAEITITPSVKGRATIFDADILIFCISQLMAAINAGKKTSRHLTLTAHDLLLATGRETSGDGYKRLRDAFERLAGTRITTNITTGALETTSGFGLIESWEIVRRTRAGRMVSVSVTLSEWLYRAVLSKSVLTLSRDYFSLRKPLERRLYELARKHCGRQPVWRVSVETLLKKSGSTSPRRVFRAMLREIITRDPLPEYTLVEEPGDIIAVRPQTLVDLPDRAPQLSPEALEEAHRLAPGADIYALEADWRTMWATSGAPRLLSPDKAFLGWVKKRNSPRR
SIO_010081: RLO149_RS22810
subclass of: SO_0000673
so part of: RLO149_RS22810
location: complement(62136..63152)
location: region:62136-63152:-1
so has part: feature:62136-63152:-1:exon

WP_013959979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62136-63152:-1:exon