Onychomys torridus chromosome 20, mOncTor1.1, whole genome shotgun sequence.
type: Entry
definition: Onychomys torridus chromosome 20, mOncTor1.1, whole genome shotgun sequence.
sequence version: NC_050462.1
sequence date: 2020-09-23
sequence: sequence
division: CON
label: NC_050462.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA664182
dblink: SAMEA104026389
keyword: WGS
keyword: RefSeq
source: Onychomys torridus (southern grasshopper mouse)
organism: Onychomys torridus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Onychomys.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR877207.1.\nAssembly name: mOncTor1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the SC on 2020/08/21. The\noriginal whole-genome shotgun project has the accession\nCAJFAA000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Onychomys torridus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 48895294
topology: linear
so has quality: SO_0000987
location: 1..48895294
location: region:1-48895294:1
RO_0002162: 38674

NC_050462
type: RefSeq
SIO_000068: refseq

PRJNA664182
type: BioProject
SIO_000068: bioproject

SAMEA104026389
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48895294:1
position: 48895294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-48895294:1:source
so part of: sequence
organism: Onychomys torridus
mol type: genomic DNA
chromosome: 20

38674
type: Taxonomy
SIO_000068: taxonomy

Plk1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Plk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 279112..289453
location: region:279112-289453:1
so has part: feature:279112-289453:1:exon
subclass of: SO_0000010

118571111
type: Gene
SIO_000068: ncbigene

position:279112:1
position: 279112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289453:1
position: 289453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279112-289453:1:exon

Plk1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Plk1
product: polo like kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036170024.1
SIO_010081: Plk1
subclass of: SO_0000673
so part of: Plk1
location: join(279112..279519,279841..280009,280876..281014,281704..281797,283172..283391,287160..287315,288102..288179,288383..288537,288635..288685,288758..288889,289029..289453)
location: region:279112-289453:1
so has part: feature:279112-279519:1:exon
so has part: feature:279841-280009:1:exon
so has part: feature:280876-281014:1:exon
so has part: feature:281704-281797:1:exon
so has part: feature:283172-283391:1:exon
so has part: feature:287160-287315:1:exon
so has part: feature:288102-288179:1:exon
so has part: feature:288383-288537:1:exon
so has part: feature:288635-288685:1:exon
so has part: feature:288758-288889:1:exon
so has part: feature:289029-289453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279112-279519:1:exon

position:279519:1
position: 279519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279841-280009:1:exon

position:279841:1
position: 279841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280009:1
position: 280009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:280876-281014:1:exon

position:280876:1
position: 280876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281014:1
position: 281014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:281704-281797:1:exon

position:281704:1
position: 281704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281797:1
position: 281797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:283172-283391:1:exon

position:283172:1
position: 283172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283391:1
position: 283391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:287160-287315:1:exon

position:287160:1
position: 287160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287315:1
position: 287315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:288102-288179:1:exon

position:288102:1
position: 288102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288179:1
position: 288179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:288383-288537:1:exon

position:288383:1
position: 288383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288537:1
position: 288537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:288635-288685:1:exon

position:288635:1
position: 288635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288685:1
position: 288685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:288758-288889:1:exon

position:288758:1
position: 288758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288889:1
position: 288889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:289029-289453:1:exon

position:289029:1
position: 289029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Plk1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Plk1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PLK1
translation: MKVADKAGKLARAPADLQKARVQRDASPSAPVAAPLLKEIPEVLVDPRSRRQYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQKEKMSMEISIHRSLAHQHVVGFHGFFEDSDFVFVVLELCRERSLLELHKRRKALTQLEVCYYLRQIVLGCQYLHLNQVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYEEEKMKTFCSPQNFIAPEAVRLGSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRMKRNKYNIPKHINPVAASLIQKMLQTDPTARPTIHELLDDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPNSRKPLTVLNKGVENPLPDRPREKEEPVVRETNEAIECHLSDLLQQLTSVNASKPSERGLVRQEEAEDPACIPIFWVSQWVDQSRKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQYIDQDGMESYPTMSSHPDSLMKKITLLQHFRSYMNEHLQKAGANITPREGDELARLPYLKKWLRTSHSILLYLSNGTIQINFFQDHTKLILCPLMAAVTYINKNQDFHTYCLSLLEEYGCCEELGRQLCYAHTMVDRLLSSKSTSNRLEDNS
SIO_010081: Plk1
subclass of: SO_0000673
so part of: Plk1
location: join(279112..279519,279841..280009,280876..281014,281704..281797,283172..283391,287160..287315,288102..288179,288383..288537,288635..288685,288758..288889,289029..289235)
location: region:279112-289235:1
so has part: feature:279112-279519:1:exon
so has part: feature:279841-280009:1:exon
so has part: feature:280876-281014:1:exon
so has part: feature:281704-281797:1:exon
so has part: feature:283172-283391:1:exon
so has part: feature:287160-287315:1:exon
so has part: feature:288102-288179:1:exon
so has part: feature:288383-288537:1:exon
so has part: feature:288635-288685:1:exon
so has part: feature:288758-288889:1:exon
so has part: feature:289029-289235:1:exon

XP_036025917.1
type: Protein
SIO_000068: ncbiprotein

position:289235:1
position: 289235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279112-279519:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279841-280009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:280876-281014:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:281704-281797:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283172-283391:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287160-287315:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:288102-288179:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288383-288537:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:288635-288685:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:288758-288889:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:289029-289235:1:exon

LOC118571280
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118571280
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(309655..309761)
location: region:309655-309761:-1
so has part: feature:309655-309761:-1:exon
subclass of: SO_0000623

118571280
type: Gene
SIO_000068: ncbigene

position:309655:-1
position: 309655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309761:-1
position: 309761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309655-309761:-1:exon

LOC118571280
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: snRNA
gene: LOC118571280
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004943318.1
SIO_010081: LOC118571280
subclass of: SO_0000673
so part of: LOC118571280
location: complement(309655..309761)
location: region:309655-309761:-1
so has part: feature:309655-309761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309655-309761:-1:exon

Aldh1l2
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Aldh1l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(321899..367189)
location: region:321899-367189:-1
so has part: feature:321899-367189:-1:exon
subclass of: SO_0000010

118570954
type: Gene
SIO_000068: ncbigene

position:321899:-1
position: 321899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367189:-1
position: 367189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321899-367189:-1:exon

Aldh1l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Aldh1l2
product: aldehyde dehydrogenase 1 family member L2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_036169722.1
SIO_010081: Aldh1l2
subclass of: SO_0000673
so part of: Aldh1l2
location: complement(join(321899..322119,324260..324459,325447..325552,327379..327544,330374..330472,333803..333902,335845..335938,336367..336454,338750..338855,338938..339008,339633..339783,341544..341671,342230..342349,346157..346304,347969..348060,348562..348687,349872..350006,352138..352227,352410..352511,354287..354452,356800..356897,367044..367189))
location: region:321899-367189:-1
so has part: feature:367044-367189:-1:exon
so has part: feature:356800-356897:-1:exon
so has part: feature:354287-354452:-1:exon
so has part: feature:352410-352511:-1:exon
so has part: feature:352138-352227:-1:exon
so has part: feature:349872-350006:-1:exon
so has part: feature:348562-348687:-1:exon
so has part: feature:347969-348060:-1:exon
so has part: feature:346157-346304:-1:exon
so has part: feature:342230-342349:-1:exon
so has part: feature:341544-341671:-1:exon
so has part: feature:339633-339783:-1:exon
so has part: feature:338938-339008:-1:exon
so has part: feature:338750-338855:-1:exon
so has part: feature:336367-336454:-1:exon
so has part: feature:335845-335938:-1:exon
so has part: feature:333803-333902:-1:exon
so has part: feature:330374-330472:-1:exon
so has part: feature:327379-327544:-1:exon
so has part: feature:325447-325552:-1:exon
so has part: feature:324260-324459:-1:exon
so has part: feature:321899-322119:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367044-367189:-1:exon

position:367044:-1
position: 367044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:356800-356897:-1:exon

position:356800:-1
position: 356800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356897:-1
position: 356897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:354287-354452:-1:exon

position:354287:-1
position: 354287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354452:-1
position: 354452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:352410-352511:-1:exon

position:352410:-1
position: 352410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352511:-1
position: 352511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:352138-352227:-1:exon

position:352138:-1
position: 352138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352227:-1
position: 352227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:349872-350006:-1:exon

position:349872:-1
position: 349872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350006:-1
position: 350006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:348562-348687:-1:exon

position:348562:-1
position: 348562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348687:-1
position: 348687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:347969-348060:-1:exon

position:347969:-1
position: 347969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348060:-1
position: 348060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:346157-346304:-1:exon

position:346157:-1
position: 346157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346304:-1
position: 346304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:342230-342349:-1:exon

position:342230:-1
position: 342230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342349:-1
position: 342349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:341544-341671:-1:exon

position:341544:-1
position: 341544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341671:-1
position: 341671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:339633-339783:-1:exon

position:339633:-1
position: 339633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339783:-1
position: 339783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:338938-339008:-1:exon

position:338938:-1
position: 338938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339008:-1
position: 339008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:338750-338855:-1:exon

position:338750:-1
position: 338750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338855:-1
position: 338855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:336367-336454:-1:exon

position:336367:-1
position: 336367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336454:-1
position: 336454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:335845-335938:-1:exon

position:335845:-1
position: 335845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335938:-1
position: 335938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:333803-333902:-1:exon

position:333803:-1
position: 333803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333902:-1
position: 333902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:330374-330472:-1:exon

position:330374:-1
position: 330374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330472:-1
position: 330472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:327379-327544:-1:exon

position:327379:-1
position: 327379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327544:-1
position: 327544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:325447-325552:-1:exon

position:325447:-1
position: 325447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325552:-1
position: 325552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:324260-324459:-1:exon

position:324260:-1
position: 324260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324459:-1
position: 324459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:321899-322119:-1:exon

position:322119:-1
position: 322119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Aldh1l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Aldh1l2
product: aldehyde dehydrogenase 1 family member L2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_036169721.1
SIO_010081: Aldh1l2
subclass of: SO_0000673
so part of: Aldh1l2
location: complement(join(321899..322119,324260..324459,325447..325552,327379..327544,330374..330472,333803..333902,335845..335938,336367..336454,338750..338855,338938..339008,339633..339783,341544..341671,342230..342349,346157..346304,347969..348060,348562..348687,349872..350006,352138..352227,352410..352511,354287..354452,356800..357034,359290..359434,367044..367189))
location: region:321899-367189:-1
so has part: feature:367044-367189:-1:exon
so has part: feature:359290-359434:-1:exon
so has part: feature:356800-357034:-1:exon
so has part: feature:354287-354452:-1:exon
so has part: feature:352410-352511:-1:exon
so has part: feature:352138-352227:-1:exon
so has part: feature:349872-350006:-1:exon
so has part: feature:348562-348687:-1:exon
so has part: feature:347969-348060:-1:exon
so has part: feature:346157-346304:-1:exon
so has part: feature:342230-342349:-1:exon
so has part: feature:341544-341671:-1:exon
so has part: feature:339633-339783:-1:exon
so has part: feature:338938-339008:-1:exon
so has part: feature:338750-338855:-1:exon
so has part: feature:336367-336454:-1:exon
so has part: feature:335845-335938:-1:exon
so has part: feature:333803-333902:-1:exon
so has part: feature:330374-330472:-1:exon
so has part: feature:327379-327544:-1:exon
so has part: feature:325447-325552:-1:exon
so has part: feature:324260-324459:-1:exon
so has part: feature:321899-322119:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367044-367189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359290-359434:-1:exon

position:359290:-1
position: 359290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359434:-1
position: 359434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:356800-357034:-1:exon

position:357034:-1
position: 357034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:354287-354452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:352410-352511:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:352138-352227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349872-350006:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:348562-348687:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:347969-348060:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:346157-346304:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342230-342349:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:341544-341671:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:339633-339783:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:338938-339008:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:338750-338855:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:336367-336454:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:335845-335938:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:333803-333902:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:330374-330472:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:327379-327544:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:325447-325552:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:324260-324459:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:321899-322119:-1:exon

Aldh1l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Aldh1l2
product: aldehyde dehydrogenase 1 family member L2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_036169723.1
SIO_010081: Aldh1l2
subclass of: SO_0000673
so part of: Aldh1l2
location: complement(join(321899..322119,324260..324459,325447..325552,327379..327544,330374..330472,333803..333902,335845..335938,336367..336454,338750..338855,338938..339008,339633..339783,341544..341671,342230..342349,346157..346304,347969..348060,348562..348687,349872..350006,352138..352227,352410..352511,354287..354452,356800..356897,359290..359351))
location: region:321899-359351:-1
so has part: feature:359290-359351:-1:exon
so has part: feature:356800-356897:-1:exon
so has part: feature:354287-354452:-1:exon
so has part: feature:352410-352511:-1:exon
so has part: feature:352138-352227:-1:exon
so has part: feature:349872-350006:-1:exon
so has part: feature:348562-348687:-1:exon
so has part: feature:347969-348060:-1:exon
so has part: feature:346157-346304:-1:exon
so has part: feature:342230-342349:-1:exon
so has part: feature:341544-341671:-1:exon
so has part: feature:339633-339783:-1:exon
so has part: feature:338938-339008:-1:exon
so has part: feature:338750-338855:-1:exon
so has part: feature:336367-336454:-1:exon
so has part: feature:335845-335938:-1:exon
so has part: feature:333803-333902:-1:exon
so has part: feature:330374-330472:-1:exon
so has part: feature:327379-327544:-1:exon
so has part: feature:325447-325552:-1:exon
so has part: feature:324260-324459:-1:exon
so has part: feature:321899-322119:-1:exon

position:359351:-1
position: 359351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359290-359351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356800-356897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354287-354452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:352410-352511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:352138-352227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:349872-350006:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:348562-348687:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:347969-348060:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:346157-346304:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342230-342349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:341544-341671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:339633-339783:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:338938-339008:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:338750-338855:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:336367-336454:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:335845-335938:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:333803-333902:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:330374-330472:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:327379-327544:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:325447-325552:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:324260-324459:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:321899-322119:-1:exon

Aldh1l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Aldh1l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 10-formyltetrahydrofolate dehydrogenase isoform X2
translation: MLWSGCQALRHFSTGQFIPMDVIDSPKHGSIIYHPSLLPRHRGASAINWTLISGDQQAGFSVFWADDGLDTGPILLQRSCDVKPNDTVDALYNRFLFPEGIKAMVEAVQLIADGKAPRISQPEEGATYEGIQKKENAEISWDQPAEVLHNWIRGHDKVPGAWAEINGQMVTFYGSSLLTSSVPAGEPLDIRGSKKPGLVTKNGLVLFGNDGKALMVRNLQFEDGKMIPASQYFSSGETSPVELTAEELKVAETIKVIWARILSNIPVIEDSIDFFKSGASSMDVMRLVEEIRQKCGGLQLQNEDVYMATKFEDFIQMVVRKLRGEDQEVELVVDYVSKEVNEMTVKMPYQCFINGQFVDAEDGETYDTVSPTDGSTICRVSYASLADVDKAVAAAKDAFENGEWGKMNARERGRLMYRLADLLEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQGSTIPINQARPNHNLTFTKKEPLGACAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELTVKAGFPKGVINIVPGSGGVAGQRLSQHPDIRKLGFTGSTSVGKQIMSSCAVSNLKKVSLELGGKSPLIIFNDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHKAHLEKLLQYCETGVKEGATLVYGGRQVQRLGFFMEPTVFTDVEDHMYLAKEESFGPIMVISKFQNGDIDGVLRRANNTEYGLASGVFTRDISKAMYVSDKLEAGTVFINTYNKTDVAAPFGGVKQSGFGKDLGEEALNEYLKTKTVTLEY
SIO_010081: Aldh1l2
subclass of: SO_0000673
so part of: Aldh1l2
location: complement(join(322064..322119,324260..324459,325447..325552,327379..327544,330374..330472,333803..333902,335845..335938,336367..336454,338750..338855,338938..339008,339633..339783,341544..341671,342230..342349,346157..346304,347969..348060,348562..348687,349872..350006,352138..352227,352410..352511,354287..354452,356800..356897,367044..367091))
location: region:322064-367091:-1
so has part: feature:367044-367091:-1:exon
so has part: feature:356800-356897:-1:exon
so has part: feature:354287-354452:-1:exon
so has part: feature:352410-352511:-1:exon
so has part: feature:352138-352227:-1:exon
so has part: feature:349872-350006:-1:exon
so has part: feature:348562-348687:-1:exon
so has part: feature:347969-348060:-1:exon
so has part: feature:346157-346304:-1:exon
so has part: feature:342230-342349:-1:exon
so has part: feature:341544-341671:-1:exon
so has part: feature:339633-339783:-1:exon
so has part: feature:338938-339008:-1:exon
so has part: feature:338750-338855:-1:exon
so has part: feature:336367-336454:-1:exon
so has part: feature:335845-335938:-1:exon
so has part: feature:333803-333902:-1:exon
so has part: feature:330374-330472:-1:exon
so has part: feature:327379-327544:-1:exon
so has part: feature:325447-325552:-1:exon
so has part: feature:324260-324459:-1:exon
so has part: feature:322064-322119:-1:exon

XP_036025615.1
type: Protein
SIO_000068: ncbiprotein

position:322064:-1
position: 322064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367091:-1
position: 367091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367044-367091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356800-356897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354287-354452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:352410-352511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:352138-352227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:349872-350006:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:348562-348687:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:347969-348060:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:346157-346304:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342230-342349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:341544-341671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:339633-339783:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:338938-339008:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:338750-338855:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:336367-336454:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:335845-335938:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:333803-333902:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:330374-330472:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:327379-327544:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:325447-325552:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:324260-324459:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:322064-322119:-1:exon

Aldh1l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Aldh1l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 10-formyltetrahydrofolate dehydrogenase isoform X1
translation: MLWSGCQALRHFSTGQVYFKNKLKLALIGQSLFGQQVYSQLQKEGHRVVGVFTVPDKDGKADPLALAAEKDGTPVFKFPRWRVKGKTIQDVAEAYQSVGAELNVLPFCTQFIPMDVIDSPKHGSIIYHPSLLPRHRGASAINWTLISGDQQAGFSVFWADDGLDTGPILLQRSCDVKPNDTVDALYNRFLFPEGIKAMVEAVQLIADGKAPRISQPEEGATYEGIQKKENAEISWDQPAEVLHNWIRGHDKVPGAWAEINGQMVTFYGSSLLTSSVPAGEPLDIRGSKKPGLVTKNGLVLFGNDGKALMVRNLQFEDGKMIPASQYFSSGETSPVELTAEELKVAETIKVIWARILSNIPVIEDSIDFFKSGASSMDVMRLVEEIRQKCGGLQLQNEDVYMATKFEDFIQMVVRKLRGEDQEVELVVDYVSKEVNEMTVKMPYQCFINGQFVDAEDGETYDTVSPTDGSTICRVSYASLADVDKAVAAAKDAFENGEWGKMNARERGRLMYRLADLLEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQGSTIPINQARPNHNLTFTKKEPLGACAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELTVKAGFPKGVINIVPGSGGVAGQRLSQHPDIRKLGFTGSTSVGKQIMSSCAVSNLKKVSLELGGKSPLIIFNDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHKAHLEKLLQYCETGVKEGATLVYGGRQVQRLGFFMEPTVFTDVEDHMYLAKEESFGPIMVISKFQNGDIDGVLRRANNTEYGLASGVFTRDISKAMYVSDKLEAGTVFINTYNKTDVAAPFGGVKQSGFGKDLGEEALNEYLKTKTVTLEY
SIO_010081: Aldh1l2
subclass of: SO_0000673
so part of: Aldh1l2
location: complement(join(322064..322119,324260..324459,325447..325552,327379..327544,330374..330472,333803..333902,335845..335938,336367..336454,338750..338855,338938..339008,339633..339783,341544..341671,342230..342349,346157..346304,347969..348060,348562..348687,349872..350006,352138..352227,352410..352511,354287..354452,356800..357034,359290..359434,367044..367091))
location: region:322064-367091:-1
so has part: feature:367044-367091:-1:exon
so has part: feature:359290-359434:-1:exon
so has part: feature:356800-357034:-1:exon
so has part: feature:354287-354452:-1:exon
so has part: feature:352410-352511:-1:exon
so has part: feature:352138-352227:-1:exon
so has part: feature:349872-350006:-1:exon
so has part: feature:348562-348687:-1:exon
so has part: feature:347969-348060:-1:exon
so has part: feature:346157-346304:-1:exon
so has part: feature:342230-342349:-1:exon
so has part: feature:341544-341671:-1:exon
so has part: feature:339633-339783:-1:exon
so has part: feature:338938-339008:-1:exon
so has part: feature:338750-338855:-1:exon
so has part: feature:336367-336454:-1:exon
so has part: feature:335845-335938:-1:exon
so has part: feature:333803-333902:-1:exon
so has part: feature:330374-330472:-1:exon
so has part: feature:327379-327544:-1:exon
so has part: feature:325447-325552:-1:exon
so has part: feature:324260-324459:-1:exon
so has part: feature:322064-322119:-1:exon

XP_036025614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367044-367091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359290-359434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:356800-357034:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354287-354452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:352410-352511:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:352138-352227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349872-350006:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:348562-348687:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:347969-348060:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:346157-346304:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342230-342349:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:341544-341671:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:339633-339783:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:338938-339008:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:338750-338855:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:336367-336454:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:335845-335938:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:333803-333902:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:330374-330472:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:327379-327544:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:325447-325552:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:324260-324459:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:322064-322119:-1:exon

Aldh1l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Aldh1l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 10-formyltetrahydrofolate dehydrogenase isoform X3
translation: MDVIDSPKHGSIIYHPSLLPRHRGASAINWTLISGDQQAGFSVFWADDGLDTGPILLQRSCDVKPNDTVDALYNRFLFPEGIKAMVEAVQLIADGKAPRISQPEEGATYEGIQKKENAEISWDQPAEVLHNWIRGHDKVPGAWAEINGQMVTFYGSSLLTSSVPAGEPLDIRGSKKPGLVTKNGLVLFGNDGKALMVRNLQFEDGKMIPASQYFSSGETSPVELTAEELKVAETIKVIWARILSNIPVIEDSIDFFKSGASSMDVMRLVEEIRQKCGGLQLQNEDVYMATKFEDFIQMVVRKLRGEDQEVELVVDYVSKEVNEMTVKMPYQCFINGQFVDAEDGETYDTVSPTDGSTICRVSYASLADVDKAVAAAKDAFENGEWGKMNARERGRLMYRLADLLEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQGSTIPINQARPNHNLTFTKKEPLGACAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELTVKAGFPKGVINIVPGSGGVAGQRLSQHPDIRKLGFTGSTSVGKQIMSSCAVSNLKKVSLELGGKSPLIIFNDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHKAHLEKLLQYCETGVKEGATLVYGGRQVQRLGFFMEPTVFTDVEDHMYLAKEESFGPIMVISKFQNGDIDGVLRRANNTEYGLASGVFTRDISKAMYVSDKLEAGTVFINTYNKTDVAAPFGGVKQSGFGKDLGEEALNEYLKTKTVTLEY
SIO_010081: Aldh1l2
subclass of: SO_0000673
so part of: Aldh1l2
location: complement(join(322064..322119,324260..324459,325447..325552,327379..327544,330374..330472,333803..333902,335845..335938,336367..336454,338750..338855,338938..339008,339633..339783,341544..341671,342230..342349,346157..346304,347969..348060,348562..348687,349872..350006,352138..352227,352410..352511,354287..354452,356800..356888))
location: region:322064-356888:-1
so has part: feature:356800-356888:-1:exon
so has part: feature:354287-354452:-1:exon
so has part: feature:352410-352511:-1:exon
so has part: feature:352138-352227:-1:exon
so has part: feature:349872-350006:-1:exon
so has part: feature:348562-348687:-1:exon
so has part: feature:347969-348060:-1:exon
so has part: feature:346157-346304:-1:exon
so has part: feature:342230-342349:-1:exon
so has part: feature:341544-341671:-1:exon
so has part: feature:339633-339783:-1:exon
so has part: feature:338938-339008:-1:exon
so has part: feature:338750-338855:-1:exon
so has part: feature:336367-336454:-1:exon
so has part: feature:335845-335938:-1:exon
so has part: feature:333803-333902:-1:exon
so has part: feature:330374-330472:-1:exon
so has part: feature:327379-327544:-1:exon
so has part: feature:325447-325552:-1:exon
so has part: feature:324260-324459:-1:exon
so has part: feature:322064-322119:-1:exon

XP_036025616.1
type: Protein
SIO_000068: ncbiprotein

position:356888:-1
position: 356888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356800-356888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354287-354452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:352410-352511:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:352138-352227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:349872-350006:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:348562-348687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:347969-348060:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:346157-346304:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342230-342349:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:341544-341671:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:339633-339783:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:338938-339008:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:338750-338855:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:336367-336454:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:335845-335938:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:333803-333902:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:330374-330472:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:327379-327544:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:325447-325552:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:324260-324459:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:322064-322119:-1:exon

Washc4
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Washc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 377056..433553
location: region:377056-433553:1
so has part: feature:377056-433553:1:exon
subclass of: SO_0000010

118570961
type: Gene
SIO_000068: ncbigene

position:377056:1
position: 377056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433553:1
position: 433553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377056-433553:1:exon

Washc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Washc4
product: WASH complex subunit 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169738.1
SIO_010081: Washc4
subclass of: SO_0000673
so part of: Washc4
location: join(377056..377201,379915..380054,382709..382762,382846..382911,383759..383804,384348..384415,386554..386636,388101..388143,388523..388626,389401..389521,391577..391700,391801..391928,393221..393381,398904..399030,405802..405927,407963..408070,408816..408962,409085..409164,410492..410597,411146..411262,412685..412853,413293..413447,415936..416010,416755..416859,418536..418670,420622..420730,422511..422577,423446..423532,425032..425179,427382..427478,428026..428222,428811..428910,431396..433553)
location: region:377056-433553:1
so has part: feature:377056-377201:1:exon
so has part: feature:379915-380054:1:exon
so has part: feature:382709-382762:1:exon
so has part: feature:382846-382911:1:exon
so has part: feature:383759-383804:1:exon
so has part: feature:384348-384415:1:exon
so has part: feature:386554-386636:1:exon
so has part: feature:388101-388143:1:exon
so has part: feature:388523-388626:1:exon
so has part: feature:389401-389521:1:exon
so has part: feature:391577-391700:1:exon
so has part: feature:391801-391928:1:exon
so has part: feature:393221-393381:1:exon
so has part: feature:398904-399030:1:exon
so has part: feature:405802-405927:1:exon
so has part: feature:407963-408070:1:exon
so has part: feature:408816-408962:1:exon
so has part: feature:409085-409164:1:exon
so has part: feature:410492-410597:1:exon
so has part: feature:411146-411262:1:exon
so has part: feature:412685-412853:1:exon
so has part: feature:413293-413447:1:exon
so has part: feature:415936-416010:1:exon
so has part: feature:416755-416859:1:exon
so has part: feature:418536-418670:1:exon
so has part: feature:420622-420730:1:exon
so has part: feature:422511-422577:1:exon
so has part: feature:423446-423532:1:exon
so has part: feature:425032-425179:1:exon
so has part: feature:427382-427478:1:exon
so has part: feature:428026-428222:1:exon
so has part: feature:428811-428910:1:exon
so has part: feature:431396-433553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377056-377201:1:exon

position:377201:1
position: 377201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:379915-380054:1:exon

position:379915:1
position: 379915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380054:1
position: 380054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:382709-382762:1:exon

position:382709:1
position: 382709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382762:1
position: 382762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:382846-382911:1:exon

position:382846:1
position: 382846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382911:1
position: 382911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:383759-383804:1:exon

position:383759:1
position: 383759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383804:1
position: 383804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:384348-384415:1:exon

position:384348:1
position: 384348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384415:1
position: 384415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:386554-386636:1:exon

position:386554:1
position: 386554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386636:1
position: 386636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:388101-388143:1:exon

position:388101:1
position: 388101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388143:1
position: 388143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:388523-388626:1:exon

position:388523:1
position: 388523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388626:1
position: 388626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:389401-389521:1:exon

position:389401:1
position: 389401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389521:1
position: 389521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:391577-391700:1:exon

position:391577:1
position: 391577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391700:1
position: 391700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:391801-391928:1:exon

position:391801:1
position: 391801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391928:1
position: 391928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:393221-393381:1:exon

position:393221:1
position: 393221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393381:1
position: 393381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:398904-399030:1:exon

position:398904:1
position: 398904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399030:1
position: 399030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:405802-405927:1:exon

position:405802:1
position: 405802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405927:1
position: 405927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:407963-408070:1:exon

position:407963:1
position: 407963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408070:1
position: 408070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:408816-408962:1:exon

position:408816:1
position: 408816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408962:1
position: 408962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:409085-409164:1:exon

position:409085:1
position: 409085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409164:1
position: 409164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:410492-410597:1:exon

position:410492:1
position: 410492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410597:1
position: 410597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:411146-411262:1:exon

position:411146:1
position: 411146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411262:1
position: 411262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:412685-412853:1:exon

position:412685:1
position: 412685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412853:1
position: 412853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:413293-413447:1:exon

position:413293:1
position: 413293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413447:1
position: 413447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:415936-416010:1:exon

position:415936:1
position: 415936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416010:1
position: 416010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:416755-416859:1:exon

position:416755:1
position: 416755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416859:1
position: 416859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:418536-418670:1:exon

position:418536:1
position: 418536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418670:1
position: 418670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:420622-420730:1:exon

position:420622:1
position: 420622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420730:1
position: 420730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:422511-422577:1:exon

position:422511:1
position: 422511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422577:1
position: 422577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:423446-423532:1:exon

position:423446:1
position: 423446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423532:1
position: 423532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:425032-425179:1:exon

position:425032:1
position: 425032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425179:1
position: 425179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:427382-427478:1:exon

position:427382:1
position: 427382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427478:1
position: 427478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:428026-428222:1:exon

position:428026:1
position: 428026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428222:1
position: 428222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:428811-428910:1:exon

position:428811:1
position: 428811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428910:1
position: 428910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:431396-433553:1:exon

position:431396:1
position: 431396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Washc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Washc4
product: WASH complex subunit 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169739.1
SIO_010081: Washc4
subclass of: SO_0000673
so part of: Washc4
location: join(377056..377201,379915..380054,382709..382762,382846..382911,383759..383804,384348..384415,386554..386636,388101..388143,388523..388626,389401..389521,391577..391700,391801..391928,393221..393381,398904..399030,405802..405927,407963..408070,408816..408962,409085..409164,410492..410597,411146..411262,412685..412853,413293..413447,415936..416010,416755..416859,418536..418670,420622..420730,422511..422577,423446..423532,425032..425179,427382..427478,428026..428222,428811..428910,431396..431465,431545..433553)
location: region:377056-433553:1
so has part: feature:377056-377201:1:exon
so has part: feature:379915-380054:1:exon
so has part: feature:382709-382762:1:exon
so has part: feature:382846-382911:1:exon
so has part: feature:383759-383804:1:exon
so has part: feature:384348-384415:1:exon
so has part: feature:386554-386636:1:exon
so has part: feature:388101-388143:1:exon
so has part: feature:388523-388626:1:exon
so has part: feature:389401-389521:1:exon
so has part: feature:391577-391700:1:exon
so has part: feature:391801-391928:1:exon
so has part: feature:393221-393381:1:exon
so has part: feature:398904-399030:1:exon
so has part: feature:405802-405927:1:exon
so has part: feature:407963-408070:1:exon
so has part: feature:408816-408962:1:exon
so has part: feature:409085-409164:1:exon
so has part: feature:410492-410597:1:exon
so has part: feature:411146-411262:1:exon
so has part: feature:412685-412853:1:exon
so has part: feature:413293-413447:1:exon
so has part: feature:415936-416010:1:exon
so has part: feature:416755-416859:1:exon
so has part: feature:418536-418670:1:exon
so has part: feature:420622-420730:1:exon
so has part: feature:422511-422577:1:exon
so has part: feature:423446-423532:1:exon
so has part: feature:425032-425179:1:exon
so has part: feature:427382-427478:1:exon
so has part: feature:428026-428222:1:exon
so has part: feature:428811-428910:1:exon
so has part: feature:431396-431465:1:exon
so has part: feature:431545-433553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377056-377201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379915-380054:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382709-382762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:382846-382911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:383759-383804:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:384348-384415:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386554-386636:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:388101-388143:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388523-388626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:389401-389521:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:391577-391700:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:391801-391928:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:393221-393381:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:398904-399030:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:405802-405927:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:407963-408070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:408816-408962:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:409085-409164:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:410492-410597:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:411146-411262:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:412685-412853:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:413293-413447:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:415936-416010:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:416755-416859:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:418536-418670:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:420622-420730:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:422511-422577:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:423446-423532:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:425032-425179:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:427382-427478:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:428026-428222:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:428811-428910:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:431396-431465:1:exon

position:431465:1
position: 431465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:431545-433553:1:exon

position:431545:1
position: 431545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Washc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Washc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WASH complex subunit 4 isoform X1
translation: MAVDTLSPDWEFDRVDDGSQKIHAEVQLKNYGKFLEEYTSQLRRIEDALDDLIGDVWDFNLDPIALKLLPYEQSSLLELIKTENKVLNKVITVYAALCCEIKKLKYEAETKFYNGLLFYGEGAADSSMVEGDCQIQMGRFVSFLQELSCFVTRCYEVVMNVIHQLAALYISNKIGPKIIETTGVHFQTMYEHLGELLTVLLTLDEIIDNHVTLKDHWTMYKRLLKSVHHNPSKFGIQEEKLKPLEKFLLKLEGQLLDGMIFQACIEQQFDSLNGGISVSKNSTFAEEFVHSIRSIFANVEAKLGEPSEIDQRDKYVGICGLFVLHFHIFRTVDKKFYKSLLDICKKVPAITLTANIIWFPDNFLIHKMPAAAKLLDRKSLQAIKIHRDIFLQQKAQSLTKDVQSYYVFVSSWMMKMESMLSKEQRMDKFAEDLTSRCNVFIQGFLYAYSISTIIKTTMNLYMSMQKPMTKTSVKALCRLIELLKAIEHMFYRRSMVVADSVSHITQHLQHQALNSISVAKKRVISDKKYSEQRLDVLSALVLAENALNGPSTKQRRLVVSLALSVGTQMKTFKDEELFPLQVVMKKLDLISELRERVQTQCDCCFLYWHRAVFPIYLDDVYENAVDAARLHYMFSALQDCVPAMMCSRHLESYELLLDCYDKEIMEILNEHLLDKLCKEIEKDLRLSVHTHLKLDDRNPFRVGRKDLALFFSLNPIRFFSRFIDIRAYVTHYLDKTFYNLTTVALHDWATYSEMRNLATQRYGLVMTEAHLPSQTLEQGLDVLEIMRNIHIFVSRYLYNLNNQIFIERTSNNKHLNTINIRHIANSIRTHGTGIMNTTVNFTYQFLKKKFYIFSQFMYDEHIKSRLIKDIRFFREIKDQNDHKYPFDRAEKFNRGIRKLGITPEGQSYLDQFRQLISQIGNAMGYIRMIRSGGLHCSSNAIRFVPDLEDIVSFEELVKEEGLAEETLRAARHLDSVLSDHTRNSAEGTEYFKMLVDVFAPEFRRPKNIHLRNFYIIVPPLTLNFVEHSISCKEKLNKKNKTGAAFTDDGFAMGVAYTLKLLDQYQEFDSLHWFQSVREKYIKEIRTVAKQQNVQSTSQDEKLLQTMNLTQKRLEVYLQEFELLYFSLSSARIFFRADKTAAEENQEKKEKEEETKTSNGNVPEGTVSADPVVK
SIO_010081: Washc4
subclass of: SO_0000673
so part of: Washc4
location: join(377141..377201,379915..380054,382709..382762,382846..382911,383759..383804,384348..384415,386554..386636,388101..388143,388523..388626,389401..389521,391577..391700,391801..391928,393221..393381,398904..399030,405802..405927,407963..408070,408816..408962,409085..409164,410492..410597,411146..411262,412685..412853,413293..413447,415936..416010,416755..416859,418536..418670,420622..420730,422511..422577,423446..423532,425032..425179,427382..427478,428026..428222,428811..428910,431396..431463)
location: region:377141-431463:1
so has part: feature:377141-377201:1:exon
so has part: feature:379915-380054:1:exon
so has part: feature:382709-382762:1:exon
so has part: feature:382846-382911:1:exon
so has part: feature:383759-383804:1:exon
so has part: feature:384348-384415:1:exon
so has part: feature:386554-386636:1:exon
so has part: feature:388101-388143:1:exon
so has part: feature:388523-388626:1:exon
so has part: feature:389401-389521:1:exon
so has part: feature:391577-391700:1:exon
so has part: feature:391801-391928:1:exon
so has part: feature:393221-393381:1:exon
so has part: feature:398904-399030:1:exon
so has part: feature:405802-405927:1:exon
so has part: feature:407963-408070:1:exon
so has part: feature:408816-408962:1:exon
so has part: feature:409085-409164:1:exon
so has part: feature:410492-410597:1:exon
so has part: feature:411146-411262:1:exon
so has part: feature:412685-412853:1:exon
so has part: feature:413293-413447:1:exon
so has part: feature:415936-416010:1:exon
so has part: feature:416755-416859:1:exon
so has part: feature:418536-418670:1:exon
so has part: feature:420622-420730:1:exon
so has part: feature:422511-422577:1:exon
so has part: feature:423446-423532:1:exon
so has part: feature:425032-425179:1:exon
so has part: feature:427382-427478:1:exon
so has part: feature:428026-428222:1:exon
so has part: feature:428811-428910:1:exon
so has part: feature:431396-431463:1:exon

XP_036025631.1
type: Protein
SIO_000068: ncbiprotein

position:377141:1
position: 377141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431463:1
position: 431463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377141-377201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379915-380054:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382709-382762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:382846-382911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:383759-383804:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:384348-384415:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386554-386636:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:388101-388143:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388523-388626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:389401-389521:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:391577-391700:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:391801-391928:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:393221-393381:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:398904-399030:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:405802-405927:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:407963-408070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:408816-408962:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:409085-409164:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:410492-410597:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:411146-411262:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:412685-412853:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:413293-413447:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:415936-416010:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:416755-416859:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:418536-418670:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:420622-420730:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:422511-422577:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:423446-423532:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:425032-425179:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:427382-427478:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:428026-428222:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:428811-428910:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:431396-431463:1:exon

Washc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Washc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WASH complex subunit 4 isoform X1
translation: MAVDTLSPDWEFDRVDDGSQKIHAEVQLKNYGKFLEEYTSQLRRIEDALDDLIGDVWDFNLDPIALKLLPYEQSSLLELIKTENKVLNKVITVYAALCCEIKKLKYEAETKFYNGLLFYGEGAADSSMVEGDCQIQMGRFVSFLQELSCFVTRCYEVVMNVIHQLAALYISNKIGPKIIETTGVHFQTMYEHLGELLTVLLTLDEIIDNHVTLKDHWTMYKRLLKSVHHNPSKFGIQEEKLKPLEKFLLKLEGQLLDGMIFQACIEQQFDSLNGGISVSKNSTFAEEFVHSIRSIFANVEAKLGEPSEIDQRDKYVGICGLFVLHFHIFRTVDKKFYKSLLDICKKVPAITLTANIIWFPDNFLIHKMPAAAKLLDRKSLQAIKIHRDIFLQQKAQSLTKDVQSYYVFVSSWMMKMESMLSKEQRMDKFAEDLTSRCNVFIQGFLYAYSISTIIKTTMNLYMSMQKPMTKTSVKALCRLIELLKAIEHMFYRRSMVVADSVSHITQHLQHQALNSISVAKKRVISDKKYSEQRLDVLSALVLAENALNGPSTKQRRLVVSLALSVGTQMKTFKDEELFPLQVVMKKLDLISELRERVQTQCDCCFLYWHRAVFPIYLDDVYENAVDAARLHYMFSALQDCVPAMMCSRHLESYELLLDCYDKEIMEILNEHLLDKLCKEIEKDLRLSVHTHLKLDDRNPFRVGRKDLALFFSLNPIRFFSRFIDIRAYVTHYLDKTFYNLTTVALHDWATYSEMRNLATQRYGLVMTEAHLPSQTLEQGLDVLEIMRNIHIFVSRYLYNLNNQIFIERTSNNKHLNTINIRHIANSIRTHGTGIMNTTVNFTYQFLKKKFYIFSQFMYDEHIKSRLIKDIRFFREIKDQNDHKYPFDRAEKFNRGIRKLGITPEGQSYLDQFRQLISQIGNAMGYIRMIRSGGLHCSSNAIRFVPDLEDIVSFEELVKEEGLAEETLRAARHLDSVLSDHTRNSAEGTEYFKMLVDVFAPEFRRPKNIHLRNFYIIVPPLTLNFVEHSISCKEKLNKKNKTGAAFTDDGFAMGVAYTLKLLDQYQEFDSLHWFQSVREKYIKEIRTVAKQQNVQSTSQDEKLLQTMNLTQKRLEVYLQEFELLYFSLSSARIFFRADKTAAEENQEKKEKEEETKTSNGNVPEGTVSADPVVK
SIO_010081: Washc4
subclass of: SO_0000673
so part of: Washc4
location: join(377141..377201,379915..380054,382709..382762,382846..382911,383759..383804,384348..384415,386554..386636,388101..388143,388523..388626,389401..389521,391577..391700,391801..391928,393221..393381,398904..399030,405802..405927,407963..408070,408816..408962,409085..409164,410492..410597,411146..411262,412685..412853,413293..413447,415936..416010,416755..416859,418536..418670,420622..420730,422511..422577,423446..423532,425032..425179,427382..427478,428026..428222,428811..428910,431396..431463)
location: region:377141-431463:1
so has part: feature:377141-377201:1:exon
so has part: feature:379915-380054:1:exon
so has part: feature:382709-382762:1:exon
so has part: feature:382846-382911:1:exon
so has part: feature:383759-383804:1:exon
so has part: feature:384348-384415:1:exon
so has part: feature:386554-386636:1:exon
so has part: feature:388101-388143:1:exon
so has part: feature:388523-388626:1:exon
so has part: feature:389401-389521:1:exon
so has part: feature:391577-391700:1:exon
so has part: feature:391801-391928:1:exon
so has part: feature:393221-393381:1:exon
so has part: feature:398904-399030:1:exon
so has part: feature:405802-405927:1:exon
so has part: feature:407963-408070:1:exon
so has part: feature:408816-408962:1:exon
so has part: feature:409085-409164:1:exon
so has part: feature:410492-410597:1:exon
so has part: feature:411146-411262:1:exon
so has part: feature:412685-412853:1:exon
so has part: feature:413293-413447:1:exon
so has part: feature:415936-416010:1:exon
so has part: feature:416755-416859:1:exon
so has part: feature:418536-418670:1:exon
so has part: feature:420622-420730:1:exon
so has part: feature:422511-422577:1:exon
so has part: feature:423446-423532:1:exon
so has part: feature:425032-425179:1:exon
so has part: feature:427382-427478:1:exon
so has part: feature:428026-428222:1:exon
so has part: feature:428811-428910:1:exon
so has part: feature:431396-431463:1:exon

XP_036025632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377141-377201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379915-380054:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382709-382762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:382846-382911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:383759-383804:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:384348-384415:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386554-386636:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:388101-388143:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388523-388626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:389401-389521:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:391577-391700:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:391801-391928:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:393221-393381:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:398904-399030:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:405802-405927:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:407963-408070:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:408816-408962:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:409085-409164:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:410492-410597:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:411146-411262:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:412685-412853:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:413293-413447:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:415936-416010:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:416755-416859:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:418536-418670:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:420622-420730:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:422511-422577:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:423446-423532:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:425032-425179:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:427382-427478:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:428026-428222:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:428811-428910:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:431396-431463:1:exon

Washc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Washc4
product: WASH complex subunit 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_036169741.1
SIO_010081: Washc4
subclass of: SO_0000673
so part of: Washc4
location: join(388101..388143,388511..388626,389401..389521,391577..391700,391801..391928,393221..393381,398904..399030,405802..405927,407963..408070,408816..408962,409085..409164,410492..410597,411146..411262,412685..412853,413293..413447,415936..416010,416755..416859,418536..418670,420622..420730,422511..422577,423446..423532,425032..425179,427382..427478,428026..428222,428811..428910,431396..433553)
location: region:388101-433553:1
so has part: feature:388101-388143:1:exon
so has part: feature:388511-388626:1:exon
so has part: feature:389401-389521:1:exon
so has part: feature:391577-391700:1:exon
so has part: feature:391801-391928:1:exon
so has part: feature:393221-393381:1:exon
so has part: feature:398904-399030:1:exon
so has part: feature:405802-405927:1:exon
so has part: feature:407963-408070:1:exon
so has part: feature:408816-408962:1:exon
so has part: feature:409085-409164:1:exon
so has part: feature:410492-410597:1:exon
so has part: feature:411146-411262:1:exon
so has part: feature:412685-412853:1:exon
so has part: feature:413293-413447:1:exon
so has part: feature:415936-416010:1:exon
so has part: feature:416755-416859:1:exon
so has part: feature:418536-418670:1:exon
so has part: feature:420622-420730:1:exon
so has part: feature:422511-422577:1:exon
so has part: feature:423446-423532:1:exon
so has part: feature:425032-425179:1:exon
so has part: feature:427382-427478:1:exon
so has part: feature:428026-428222:1:exon
so has part: feature:428811-428910:1:exon
so has part: feature:431396-433553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:388101-388143:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:388511-388626:1:exon

position:388511:1
position: 388511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:389401-389521:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391577-391700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391801-391928:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:393221-393381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398904-399030:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:405802-405927:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407963-408070:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:408816-408962:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:409085-409164:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:410492-410597:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:411146-411262:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:412685-412853:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:413293-413447:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:415936-416010:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:416755-416859:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:418536-418670:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:420622-420730:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:422511-422577:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:423446-423532:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:425032-425179:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:427382-427478:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:428026-428222:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:428811-428910:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:431396-433553:1:exon

Washc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Washc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WASH complex subunit 4 isoform X2
translation: MYEHLGELLTVLLTLDEIIDNHVTLKDHWTMYKRLLKSVHHNPSKFGIQEEKLKPLEKFLLKLEGQLLDGMIFQACIEQQFDSLNGGISVSKNSTFAEEFVHSIRSIFANVEAKLGEPSEIDQRDKYVGICGLFVLHFHIFRTVDKKFYKSLLDICKKVPAITLTANIIWFPDNFLIHKMPAAAKLLDRKSLQAIKIHRDIFLQQKAQSLTKDVQSYYVFVSSWMMKMESMLSKEQRMDKFAEDLTSRCNVFIQGFLYAYSISTIIKTTMNLYMSMQKPMTKTSVKALCRLIELLKAIEHMFYRRSMVVADSVSHITQHLQHQALNSISVAKKRVISDKKYSEQRLDVLSALVLAENALNGPSTKQRRLVVSLALSVGTQMKTFKDEELFPLQVVMKKLDLISELRERVQTQCDCCFLYWHRAVFPIYLDDVYENAVDAARLHYMFSALQDCVPAMMCSRHLESYELLLDCYDKEIMEILNEHLLDKLCKEIEKDLRLSVHTHLKLDDRNPFRVGRKDLALFFSLNPIRFFSRFIDIRAYVTHYLDKTFYNLTTVALHDWATYSEMRNLATQRYGLVMTEAHLPSQTLEQGLDVLEIMRNIHIFVSRYLYNLNNQIFIERTSNNKHLNTINIRHIANSIRTHGTGIMNTTVNFTYQFLKKKFYIFSQFMYDEHIKSRLIKDIRFFREIKDQNDHKYPFDRAEKFNRGIRKLGITPEGQSYLDQFRQLISQIGNAMGYIRMIRSGGLHCSSNAIRFVPDLEDIVSFEELVKEEGLAEETLRAARHLDSVLSDHTRNSAEGTEYFKMLVDVFAPEFRRPKNIHLRNFYIIVPPLTLNFVEHSISCKEKLNKKNKTGAAFTDDGFAMGVAYTLKLLDQYQEFDSLHWFQSVREKYIKEIRTVAKQQNVQSTSQDEKLLQTMNLTQKRLEVYLQEFELLYFSLSSARIFFRADKTAAEENQEKKEKEEETKTSNGNVPEGTVSADPVVK
SIO_010081: Washc4
subclass of: SO_0000673
so part of: Washc4
location: join(388526..388626,389401..389521,391577..391700,391801..391928,393221..393381,398904..399030,405802..405927,407963..408070,408816..408962,409085..409164,410492..410597,411146..411262,412685..412853,413293..413447,415936..416010,416755..416859,418536..418670,420622..420730,422511..422577,423446..423532,425032..425179,427382..427478,428026..428222,428811..428910,431396..431463)
location: region:388526-431463:1
so has part: feature:388526-388626:1:exon
so has part: feature:389401-389521:1:exon
so has part: feature:391577-391700:1:exon
so has part: feature:391801-391928:1:exon
so has part: feature:393221-393381:1:exon
so has part: feature:398904-399030:1:exon
so has part: feature:405802-405927:1:exon
so has part: feature:407963-408070:1:exon
so has part: feature:408816-408962:1:exon
so has part: feature:409085-409164:1:exon
so has part: feature:410492-410597:1:exon
so has part: feature:411146-411262:1:exon
so has part: feature:412685-412853:1:exon
so has part: feature:413293-413447:1:exon
so has part: feature:415936-416010:1:exon
so has part: feature:416755-416859:1:exon
so has part: feature:418536-418670:1:exon
so has part: feature:420622-420730:1:exon
so has part: feature:422511-422577:1:exon
so has part: feature:423446-423532:1:exon
so has part: feature:425032-425179:1:exon
so has part: feature:427382-427478:1:exon
so has part: feature:428026-428222:1:exon
so has part: feature:428811-428910:1:exon
so has part: feature:431396-431463:1:exon

XP_036025634.1
type: Protein
SIO_000068: ncbiprotein

position:388526:1
position: 388526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388526-388626:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389401-389521:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391577-391700:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391801-391928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:393221-393381:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398904-399030:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405802-405927:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407963-408070:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:408816-408962:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409085-409164:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:410492-410597:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:411146-411262:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:412685-412853:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:413293-413447:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:415936-416010:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:416755-416859:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:418536-418670:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:420622-420730:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:422511-422577:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:423446-423532:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:425032-425179:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:427382-427478:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:428026-428222:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:428811-428910:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:431396-431463:1:exon

Appl2
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Appl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(439191..485603)
location: region:439191-485603:-1
so has part: feature:439191-485603:-1:exon
subclass of: SO_0000010

118570874
type: Gene
SIO_000068: ncbigene

position:439191:-1
position: 439191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485603:-1
position: 485603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439191-485603:-1:exon

Appl2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Appl2
product: adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169582.1
SIO_010081: Appl2
subclass of: SO_0000673
so part of: Appl2
location: complement(join(439191..440002,441151..441198,441995..442135,442352..442388,444826..445000,446336..446388,446535..446693,448613..448701,448784..448840,448920..448962,450218..450406,451655..451813,455144..455226,458369..458515,459369..459427,459536..459577,462588..462675,466355..466426,466878..466937,476891..476989,485296..485603))
location: region:439191-485603:-1
so has part: feature:485296-485603:-1:exon
so has part: feature:476891-476989:-1:exon
so has part: feature:466878-466937:-1:exon
so has part: feature:466355-466426:-1:exon
so has part: feature:462588-462675:-1:exon
so has part: feature:459536-459577:-1:exon
so has part: feature:459369-459427:-1:exon
so has part: feature:458369-458515:-1:exon
so has part: feature:455144-455226:-1:exon
so has part: feature:451655-451813:-1:exon
so has part: feature:450218-450406:-1:exon
so has part: feature:448920-448962:-1:exon
so has part: feature:448784-448840:-1:exon
so has part: feature:448613-448701:-1:exon
so has part: feature:446535-446693:-1:exon
so has part: feature:446336-446388:-1:exon
so has part: feature:444826-445000:-1:exon
so has part: feature:442352-442388:-1:exon
so has part: feature:441995-442135:-1:exon
so has part: feature:441151-441198:-1:exon
so has part: feature:439191-440002:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:485296-485603:-1:exon

position:485296:-1
position: 485296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:476891-476989:-1:exon

position:476891:-1
position: 476891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476989:-1
position: 476989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:466878-466937:-1:exon

position:466878:-1
position: 466878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466937:-1
position: 466937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:466355-466426:-1:exon

position:466355:-1
position: 466355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466426:-1
position: 466426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:462588-462675:-1:exon

position:462588:-1
position: 462588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462675:-1
position: 462675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:459536-459577:-1:exon

position:459536:-1
position: 459536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459577:-1
position: 459577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:459369-459427:-1:exon

position:459369:-1
position: 459369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459427:-1
position: 459427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:458369-458515:-1:exon

position:458369:-1
position: 458369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458515:-1
position: 458515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:455144-455226:-1:exon

position:455144:-1
position: 455144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455226:-1
position: 455226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:451655-451813:-1:exon

position:451655:-1
position: 451655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451813:-1
position: 451813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:450218-450406:-1:exon

position:450218:-1
position: 450218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450406:-1
position: 450406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:448920-448962:-1:exon

position:448920:-1
position: 448920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448962:-1
position: 448962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:448784-448840:-1:exon

position:448784:-1
position: 448784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448840:-1
position: 448840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:448613-448701:-1:exon

position:448613:-1
position: 448613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448701:-1
position: 448701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:446535-446693:-1:exon

position:446535:-1
position: 446535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446693:-1
position: 446693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:446336-446388:-1:exon

position:446336:-1
position: 446336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446388:-1
position: 446388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:444826-445000:-1:exon

position:444826:-1
position: 444826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445000:-1
position: 445000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:442352-442388:-1:exon

position:442352:-1
position: 442352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442388:-1
position: 442388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:441995-442135:-1:exon

position:441995:-1
position: 441995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442135:-1
position: 442135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:441151-441198:-1:exon

position:441151:-1
position: 441151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441198:-1
position: 441198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:439191-440002:-1:exon

position:440002:-1
position: 440002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Appl2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Appl2
product: adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169581.1
SIO_010081: Appl2
subclass of: SO_0000673
so part of: Appl2
location: complement(join(439191..440235,441151..441198,441995..442135,442352..442388,444826..445000,446336..446388,446535..446693,448613..448701,448784..448840,448920..448962,450218..450406,451655..451813,455144..455226,458369..458515,459369..459427,459536..459577,462588..462675,466355..466426,466878..466937,476891..476989,485296..485603))
location: region:439191-485603:-1
so has part: feature:485296-485603:-1:exon
so has part: feature:476891-476989:-1:exon
so has part: feature:466878-466937:-1:exon
so has part: feature:466355-466426:-1:exon
so has part: feature:462588-462675:-1:exon
so has part: feature:459536-459577:-1:exon
so has part: feature:459369-459427:-1:exon
so has part: feature:458369-458515:-1:exon
so has part: feature:455144-455226:-1:exon
so has part: feature:451655-451813:-1:exon
so has part: feature:450218-450406:-1:exon
so has part: feature:448920-448962:-1:exon
so has part: feature:448784-448840:-1:exon
so has part: feature:448613-448701:-1:exon
so has part: feature:446535-446693:-1:exon
so has part: feature:446336-446388:-1:exon
so has part: feature:444826-445000:-1:exon
so has part: feature:442352-442388:-1:exon
so has part: feature:441995-442135:-1:exon
so has part: feature:441151-441198:-1:exon
so has part: feature:439191-440235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:485296-485603:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476891-476989:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466878-466937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466355-466426:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462588-462675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459536-459577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:459369-459427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:458369-458515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455144-455226:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451655-451813:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:450218-450406:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448920-448962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:448784-448840:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448613-448701:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:446535-446693:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:446336-446388:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:444826-445000:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:442352-442388:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:441995-442135:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:441151-441198:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:439191-440235:-1:exon

position:440235:-1
position: 440235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Appl2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Appl2
product: adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_036169584.1
SIO_010081: Appl2
subclass of: SO_0000673
so part of: Appl2
location: complement(join(439191..440235,441151..441198,441995..442135,442352..442388,444826..445000,446336..446388,446535..446693,448613..448701,448784..448840,448920..448962,450218..450406,451655..451813,455144..455226,458369..458515,459369..459427,459536..459577,462588..462675,466355..466426,466878..466937,476891..476989,484641..484706,485296..485334))
location: region:439191-485334:-1
so has part: feature:485296-485334:-1:exon
so has part: feature:484641-484706:-1:exon
so has part: feature:476891-476989:-1:exon
so has part: feature:466878-466937:-1:exon
so has part: feature:466355-466426:-1:exon
so has part: feature:462588-462675:-1:exon
so has part: feature:459536-459577:-1:exon
so has part: feature:459369-459427:-1:exon
so has part: feature:458369-458515:-1:exon
so has part: feature:455144-455226:-1:exon
so has part: feature:451655-451813:-1:exon
so has part: feature:450218-450406:-1:exon
so has part: feature:448920-448962:-1:exon
so has part: feature:448784-448840:-1:exon
so has part: feature:448613-448701:-1:exon
so has part: feature:446535-446693:-1:exon
so has part: feature:446336-446388:-1:exon
so has part: feature:444826-445000:-1:exon
so has part: feature:442352-442388:-1:exon
so has part: feature:441995-442135:-1:exon
so has part: feature:441151-441198:-1:exon
so has part: feature:439191-440235:-1:exon

position:485334:-1
position: 485334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485296-485334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484641-484706:-1:exon

position:484641:-1
position: 484641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484706:-1
position: 484706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:476891-476989:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466878-466937:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466355-466426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:462588-462675:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:459536-459577:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:459369-459427:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:458369-458515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:455144-455226:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:451655-451813:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450218-450406:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:448920-448962:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448784-448840:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:448613-448701:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:446535-446693:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:446336-446388:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:444826-445000:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:442352-442388:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:441995-442135:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:441151-441198:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:439191-440235:-1:exon

Appl2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Appl2
product: adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_036169583.1
SIO_010081: Appl2
subclass of: SO_0000673
so part of: Appl2
location: complement(join(439191..440235,441151..441198,441995..442135,442352..442388,444826..445000,446336..446388,446535..446693,448613..448701,448784..448840,448920..448962,450218..450406,451655..451813,455144..455226,458369..458515,459369..459427,459536..459577,462588..462675,466355..466426,466878..466937,476891..476989,477281..477455))
location: region:439191-477455:-1
so has part: feature:477281-477455:-1:exon
so has part: feature:476891-476989:-1:exon
so has part: feature:466878-466937:-1:exon
so has part: feature:466355-466426:-1:exon
so has part: feature:462588-462675:-1:exon
so has part: feature:459536-459577:-1:exon
so has part: feature:459369-459427:-1:exon
so has part: feature:458369-458515:-1:exon
so has part: feature:455144-455226:-1:exon
so has part: feature:451655-451813:-1:exon
so has part: feature:450218-450406:-1:exon
so has part: feature:448920-448962:-1:exon
so has part: feature:448784-448840:-1:exon
so has part: feature:448613-448701:-1:exon
so has part: feature:446535-446693:-1:exon
so has part: feature:446336-446388:-1:exon
so has part: feature:444826-445000:-1:exon
so has part: feature:442352-442388:-1:exon
so has part: feature:441995-442135:-1:exon
so has part: feature:441151-441198:-1:exon
so has part: feature:439191-440235:-1:exon

position:477455:-1
position: 477455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477281-477455:-1:exon

position:477281:-1
position: 477281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:476891-476989:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466878-466937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466355-466426:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462588-462675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459536-459577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:459369-459427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:458369-458515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455144-455226:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451655-451813:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:450218-450406:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448920-448962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:448784-448840:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448613-448701:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:446535-446693:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:446336-446388:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:444826-445000:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:442352-442388:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:441995-442135:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:441151-441198:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:439191-440235:-1:exon

Appl2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Appl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DCC-interacting protein 13-beta isoform X2
translation: MPAVDKLLLEEALQDSPQTRSLLSVFEEDAGTLTDYTNQLLQAMQRVYGAQNEMCLATQQLSKQLLAYERQNFALGKGDEEVISTLHYFSKVMDELNGLHAELAKQLADTVVLPVIQFREKDLTEVSTLKDLFGLASNEHDLSMAKYSRLPKKKENERVKAEVGKEVASARRKQHLSSLQYYCALNALQYRKRMAMMEPLIGFAHGQINFFKRGAEMFSKSMDGFLSSVTDMVQSIQVELETEADKMRVSQQELLSVDESVYTPDMDVATSQINRNLIQKTGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAVAGGLIQDLDNCSVMAVDCEDRRYCFQISTPSGKPGIILQAESRKEYEEWICAINNISRQIYLTDNPEAVAIKLNQTALQAVTPITSFGKKQESSCSSQTMKNSKTENDKIVPRTIGSVPETEELIAPGTPIQFDIVLPATEFLEQNRGSRRTNPFGETEDESFPEAEDSLLQQMFIVRFLGSMAVKTDHTAEVIYEAMRQVLAARAIHNIFRTTESHLMVTSQTLRLIDPQTQVSRACFELTSVTQFAAHQENKRLVGFVIRVPESTGEESLSTYIFESNSEGEKICYAINLGKEIIEVQKSAGSPM
SIO_010081: Appl2
subclass of: SO_0000673
so part of: Appl2
location: complement(join(439982..440002,441151..441198,441995..442135,442352..442388,444826..445000,446336..446388,446535..446693,448613..448701,448784..448840,448920..448962,450218..450406,451655..451813,455144..455226,458369..458515,459369..459427,459536..459577,462588..462675,466355..466426,466878..466937,476891..476989,485296..485349))
location: region:439982-485349:-1
so has part: feature:485296-485349:-1:exon
so has part: feature:476891-476989:-1:exon
so has part: feature:466878-466937:-1:exon
so has part: feature:466355-466426:-1:exon
so has part: feature:462588-462675:-1:exon
so has part: feature:459536-459577:-1:exon
so has part: feature:459369-459427:-1:exon
so has part: feature:458369-458515:-1:exon
so has part: feature:455144-455226:-1:exon
so has part: feature:451655-451813:-1:exon
so has part: feature:450218-450406:-1:exon
so has part: feature:448920-448962:-1:exon
so has part: feature:448784-448840:-1:exon
so has part: feature:448613-448701:-1:exon
so has part: feature:446535-446693:-1:exon
so has part: feature:446336-446388:-1:exon
so has part: feature:444826-445000:-1:exon
so has part: feature:442352-442388:-1:exon
so has part: feature:441995-442135:-1:exon
so has part: feature:441151-441198:-1:exon
so has part: feature:439982-440002:-1:exon

XP_036025475.1
type: Protein
SIO_000068: ncbiprotein

position:439982:-1
position: 439982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485349:-1
position: 485349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485296-485349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476891-476989:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466878-466937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466355-466426:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462588-462675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459536-459577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:459369-459427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:458369-458515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455144-455226:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451655-451813:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:450218-450406:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448920-448962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:448784-448840:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448613-448701:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:446535-446693:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:446336-446388:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:444826-445000:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:442352-442388:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:441995-442135:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:441151-441198:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:439982-440002:-1:exon

Appl2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Appl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DCC-interacting protein 13-beta isoform X1
translation: MPAVDKLLLEEALQDSPQTRSLLSVFEEDAGTLTDYTNQLLQAMQRVYGAQNEMCLATQQLSKQLLAYERQNFALGKGDEEVISTLHYFSKVMDELNGLHAELAKQLADTVVLPVIQFREKDLTEVSTLKDLFGLASNEHDLSMAKYSRLPKKKENERVKAEVGKEVASARRKQHLSSLQYYCALNALQYRKRMAMMEPLIGFAHGQINFFKRGAEMFSKSMDGFLSSVTDMVQSIQVELETEADKMRVSQQELLSVDESVYTPDMDVATSQINRNLIQKTGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAVAGGLIQDLDNCSVMAVDCEDRRYCFQISTPSGKPGIILQAESRKEYEEWICAINNISRQIYLTDNPEAVAIKLNQTALQAVTPITSFGKKQESSCSSQTMKNSKTENDKIVPRTIGSVPETEELIAPGTPIQFDIVLPATEFLEQNRGSRRTNPFGETEDESFPEAEDSLLQQMFIVRFLGSMAVKTDHTAEVIYEAMRQVLAARAIHNIFRTTESHLMVTSQTLRLIDPQTQVSRACFELTSVTQFAAHQENKRLVGFVIRVPESTGEESLSTYIFESNSEGEKICYAINLGKEIIEVQKDPEALAQLMLSLPLTNDGKYVLLNDHADGAGGSLSDSRGAESEA
SIO_010081: Appl2
subclass of: SO_0000673
so part of: Appl2
location: complement(join(440101..440235,441151..441198,441995..442135,442352..442388,444826..445000,446336..446388,446535..446693,448613..448701,448784..448840,448920..448962,450218..450406,451655..451813,455144..455226,458369..458515,459369..459427,459536..459577,462588..462675,466355..466426,466878..466937,476891..476989,485296..485349))
location: region:440101-485349:-1
so has part: feature:485296-485349:-1:exon
so has part: feature:476891-476989:-1:exon
so has part: feature:466878-466937:-1:exon
so has part: feature:466355-466426:-1:exon
so has part: feature:462588-462675:-1:exon
so has part: feature:459536-459577:-1:exon
so has part: feature:459369-459427:-1:exon
so has part: feature:458369-458515:-1:exon
so has part: feature:455144-455226:-1:exon
so has part: feature:451655-451813:-1:exon
so has part: feature:450218-450406:-1:exon
so has part: feature:448920-448962:-1:exon
so has part: feature:448784-448840:-1:exon
so has part: feature:448613-448701:-1:exon
so has part: feature:446535-446693:-1:exon
so has part: feature:446336-446388:-1:exon
so has part: feature:444826-445000:-1:exon
so has part: feature:442352-442388:-1:exon
so has part: feature:441995-442135:-1:exon
so has part: feature:441151-441198:-1:exon
so has part: feature:440101-440235:-1:exon

XP_036025474.1
type: Protein
SIO_000068: ncbiprotein

position:440101:-1
position: 440101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485296-485349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476891-476989:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466878-466937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466355-466426:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462588-462675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459536-459577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:459369-459427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:458369-458515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455144-455226:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451655-451813:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:450218-450406:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448920-448962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:448784-448840:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448613-448701:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:446535-446693:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:446336-446388:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:444826-445000:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:442352-442388:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:441995-442135:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:441151-441198:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:440101-440235:-1:exon

Appl2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Appl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DCC-interacting protein 13-beta isoform X3
translation: MQRVYGAQNEMCLATQQLSKQLLAYERQNFALGKGDEEVISTLHYFSKVMDELNGLHAELAKQLADTVVLPVIQFREKDLTEVSTLKDLFGLASNEHDLSMAKYSRLPKKKENERVKAEVGKEVASARRKQHLSSLQYYCALNALQYRKRMAMMEPLIGFAHGQINFFKRGAEMFSKSMDGFLSSVTDMVQSIQVELETEADKMRVSQQELLSVDESVYTPDMDVATSQINRNLIQKTGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAVAGGLIQDLDNCSVMAVDCEDRRYCFQISTPSGKPGIILQAESRKEYEEWICAINNISRQIYLTDNPEAVAIKLNQTALQAVTPITSFGKKQESSCSSQTMKNSKTENDKIVPRTIGSVPETEELIAPGTPIQFDIVLPATEFLEQNRGSRRTNPFGETEDESFPEAEDSLLQQMFIVRFLGSMAVKTDHTAEVIYEAMRQVLAARAIHNIFRTTESHLMVTSQTLRLIDPQTQVSRACFELTSVTQFAAHQENKRLVGFVIRVPESTGEESLSTYIFESNSEGEKICYAINLGKEIIEVQKDPEALAQLMLSLPLTNDGKYVLLNDHADGAGGSLSDSRGAESEA
SIO_010081: Appl2
subclass of: SO_0000673
so part of: Appl2
location: complement(join(440101..440235,441151..441198,441995..442135,442352..442388,444826..445000,446336..446388,446535..446693,448613..448701,448784..448840,448920..448962,450218..450406,451655..451813,455144..455226,458369..458515,459369..459427,459536..459577,462588..462675,466355..466426,466878..466937,476891..476914))
location: region:440101-476914:-1
so has part: feature:476891-476914:-1:exon
so has part: feature:466878-466937:-1:exon
so has part: feature:466355-466426:-1:exon
so has part: feature:462588-462675:-1:exon
so has part: feature:459536-459577:-1:exon
so has part: feature:459369-459427:-1:exon
so has part: feature:458369-458515:-1:exon
so has part: feature:455144-455226:-1:exon
so has part: feature:451655-451813:-1:exon
so has part: feature:450218-450406:-1:exon
so has part: feature:448920-448962:-1:exon
so has part: feature:448784-448840:-1:exon
so has part: feature:448613-448701:-1:exon
so has part: feature:446535-446693:-1:exon
so has part: feature:446336-446388:-1:exon
so has part: feature:444826-445000:-1:exon
so has part: feature:442352-442388:-1:exon
so has part: feature:441995-442135:-1:exon
so has part: feature:441151-441198:-1:exon
so has part: feature:440101-440235:-1:exon

XP_036025476.1
type: Protein
SIO_000068: ncbiprotein

position:476914:-1
position: 476914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476891-476914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466878-466937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466355-466426:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:462588-462675:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459536-459577:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459369-459427:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:458369-458515:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455144-455226:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:451655-451813:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:450218-450406:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:448920-448962:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448784-448840:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:448613-448701:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:446535-446693:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:446336-446388:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:444826-445000:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:442352-442388:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:441995-442135:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:441151-441198:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:440101-440235:-1:exon

Appl2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Appl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DCC-interacting protein 13-beta isoform X3
translation: MQRVYGAQNEMCLATQQLSKQLLAYERQNFALGKGDEEVISTLHYFSKVMDELNGLHAELAKQLADTVVLPVIQFREKDLTEVSTLKDLFGLASNEHDLSMAKYSRLPKKKENERVKAEVGKEVASARRKQHLSSLQYYCALNALQYRKRMAMMEPLIGFAHGQINFFKRGAEMFSKSMDGFLSSVTDMVQSIQVELETEADKMRVSQQELLSVDESVYTPDMDVATSQINRNLIQKTGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAVAGGLIQDLDNCSVMAVDCEDRRYCFQISTPSGKPGIILQAESRKEYEEWICAINNISRQIYLTDNPEAVAIKLNQTALQAVTPITSFGKKQESSCSSQTMKNSKTENDKIVPRTIGSVPETEELIAPGTPIQFDIVLPATEFLEQNRGSRRTNPFGETEDESFPEAEDSLLQQMFIVRFLGSMAVKTDHTAEVIYEAMRQVLAARAIHNIFRTTESHLMVTSQTLRLIDPQTQVSRACFELTSVTQFAAHQENKRLVGFVIRVPESTGEESLSTYIFESNSEGEKICYAINLGKEIIEVQKDPEALAQLMLSLPLTNDGKYVLLNDHADGAGGSLSDSRGAESEA
SIO_010081: Appl2
subclass of: SO_0000673
so part of: Appl2
location: complement(join(440101..440235,441151..441198,441995..442135,442352..442388,444826..445000,446336..446388,446535..446693,448613..448701,448784..448840,448920..448962,450218..450406,451655..451813,455144..455226,458369..458515,459369..459427,459536..459577,462588..462675,466355..466426,466878..466937,476891..476914))
location: region:440101-476914:-1
so has part: feature:476891-476914:-1:exon
so has part: feature:466878-466937:-1:exon
so has part: feature:466355-466426:-1:exon
so has part: feature:462588-462675:-1:exon
so has part: feature:459536-459577:-1:exon
so has part: feature:459369-459427:-1:exon
so has part: feature:458369-458515:-1:exon
so has part: feature:455144-455226:-1:exon
so has part: feature:451655-451813:-1:exon
so has part: feature:450218-450406:-1:exon
so has part: feature:448920-448962:-1:exon
so has part: feature:448784-448840:-1:exon
so has part: feature:448613-448701:-1:exon
so has part: feature:446535-446693:-1:exon
so has part: feature:446336-446388:-1:exon
so has part: feature:444826-445000:-1:exon
so has part: feature:442352-442388:-1:exon
so has part: feature:441995-442135:-1:exon
so has part: feature:441151-441198:-1:exon
so has part: feature:440101-440235:-1:exon

XP_036025477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476891-476914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466878-466937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466355-466426:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:462588-462675:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459536-459577:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459369-459427:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:458369-458515:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455144-455226:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:451655-451813:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:450218-450406:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:448920-448962:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448784-448840:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:448613-448701:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:446535-446693:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:446336-446388:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:444826-445000:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:442352-442388:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:441995-442135:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:441151-441198:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:440101-440235:-1:exon

C20H12orf75
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: C20H12orf75
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 556610..599275
location: region:556610-599275:1
so has part: feature:556610-599275:1:exon
subclass of: SO_0000010

118571060
type: Gene
SIO_000068: ncbigene

position:556610:1
position: 556610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599275:1
position: 599275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556610-599275:1:exon

C20H12orf75
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 38674
gene: C20H12orf75
product: chromosome 20 C12orf75 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004943285.1
SIO_010081: C20H12orf75
so part of: C20H12orf75
location: join(556610..556811,574850..574874,594085..594120,594719..594798,595157..595194,596001..596063,598433..599275)
location: region:556610-599275:1
so has part: feature:556610-556811:1:exon
so has part: feature:574850-574874:1:exon
so has part: feature:594085-594120:1:exon
so has part: feature:594719-594798:1:exon
so has part: feature:595157-595194:1:exon
so has part: feature:596001-596063:1:exon
so has part: feature:598433-599275:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:556610-556811:1:exon

position:556811:1
position: 556811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:574850-574874:1:exon

position:574850:1
position: 574850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574874:1
position: 574874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:594085-594120:1:exon

position:594085:1
position: 594085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594120:1
position: 594120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:594719-594798:1:exon

position:594719:1
position: 594719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594798:1
position: 594798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:595157-595194:1:exon

position:595157:1
position: 595157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595194:1
position: 595194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:596001-596063:1:exon

position:596001:1
position: 596001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596063:1
position: 596063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:598433-599275:1:exon

position:598433:1
position: 598433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C20H12orf75
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: C20H12orf75
product: chromosome 20 C12orf75 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169948.1
SIO_010081: C20H12orf75
subclass of: SO_0000673
so part of: C20H12orf75
location: join(556610..556811,574850..574874,594085..594120,594719..594798,595157..595194,598433..599275)
location: region:556610-599275:1
so has part: feature:556610-556811:1:exon
so has part: feature:574850-574874:1:exon
so has part: feature:594085-594120:1:exon
so has part: feature:594719-594798:1:exon
so has part: feature:595157-595194:1:exon
so has part: feature:598433-599275:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:556610-556811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574850-574874:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594085-594120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:594719-594798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595157-595194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:598433-599275:1:exon

C20H12orf75
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: C20H12orf75
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: overexpressed in colon carcinoma 1 protein
translation: MGCGNSTATSGGAGRGPTGAVKDATEDSITDDDKRRNYGGVYVGLPSEAASMVSSQAKTVRKN
SIO_010081: C20H12orf75
subclass of: SO_0000673
so part of: C20H12orf75
location: join(556766..556811,574850..574874,594085..594120,594719..594798,595157..595161)
location: region:556766-595161:1
so has part: feature:556766-556811:1:exon
so has part: feature:574850-574874:1:exon
so has part: feature:594085-594120:1:exon
so has part: feature:594719-594798:1:exon
so has part: feature:595157-595161:1:exon

XP_036025841.1
type: Protein
SIO_000068: ncbiprotein

position:556766:1
position: 556766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595161:1
position: 595161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556766-556811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574850-574874:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594085-594120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:594719-594798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595157-595161:1:exon

Nuak1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Nuak1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1151932..1219246)
location: region:1151932-1219246:-1
so has part: feature:1151932-1219246:-1:exon
subclass of: SO_0000010

118571166
type: Gene
SIO_000068: ncbigene

position:1151932:-1
position: 1151932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219246:-1
position: 1219246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1151932-1219246:-1:exon

Nuak1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Nuak1
product: NUAK family kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036170090.1
SIO_010081: Nuak1
subclass of: SO_0000673
so part of: Nuak1
location: complement(join(1151932..1153104,1156042..1156174,1158243..1158362,1169474..1169539,1171226..1171377,1193261..1193381,1218085..1219246))
location: region:1151932-1219246:-1
so has part: feature:1218085-1219246:-1:exon
so has part: feature:1193261-1193381:-1:exon
so has part: feature:1171226-1171377:-1:exon
so has part: feature:1169474-1169539:-1:exon
so has part: feature:1158243-1158362:-1:exon
so has part: feature:1156042-1156174:-1:exon
so has part: feature:1151932-1153104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1218085-1219246:-1:exon

position:1218085:-1
position: 1218085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1193261-1193381:-1:exon

position:1193261:-1
position: 1193261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193381:-1
position: 1193381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1171226-1171377:-1:exon

position:1171226:-1
position: 1171226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171377:-1
position: 1171377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1169474-1169539:-1:exon

position:1169474:-1
position: 1169474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169539:-1
position: 1169539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1158243-1158362:-1:exon

position:1158243:-1
position: 1158243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158362:-1
position: 1158362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1156042-1156174:-1:exon

position:1156042:-1
position: 1156042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156174:-1
position: 1156174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1151932-1153104:-1:exon

position:1153104:-1
position: 1153104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Nuak1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Nuak1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NUAK family SNF1-like kinase 1
translation: MEGAAVPAAGDGPDVEPGPQGSLREAVAGATASPAEPKKPHGVKRHHHKHNLKHRYELQETLGKGTYGKVKRATERFSGRVVAIKSIRKDKIKDELDMVHIRREIEIMSSLNHPHIISIYEVFENKDKIVIIMEYASKGELYDYISERRRLSERETRHFFRQIVSAVHYCHKNGVVHRDLKLENILLDDNCNIKIADFGLSNLYQKDKYLQTFCGSPLYASPEIVNGRPYRGPEVDSWALGVLLYTLIYGTMPFDGFDHKNLIRQISSGEYREPTQPSDARGLIRWMLMVNPDRRATIEDIANHWWVNWGYKSSVCDCDALTDSESPLLARIIDWHHRSTGLQAEAEAKMKGLAKAGASEVVLERQRSLKKSKKESDFPPSGQDAVPESPSKLSSKRPKGILKKRGNSEHRSHSTGFIEGIVGPTLPSPFKMEQDLCRTGIPLPSSPEAEMSGKLSLKQSATMPKKGILKKTQQRESGYYSSPERSESSELLDSNDVIIGSGLTSPSSEAARGTSHSLSCRRKGILKHSSRYSDGATDPALAGPEMPTLESLSAPGVPPDGVSRSYSRPSSVISDDSVLSSDSFDLLDLQENRPARQRIRSCVSAENFLQLQDFETLHNRPPQHLKRYRNRLADSSFSLLTDMDDVTQVYKKALEICSKLN
SIO_010081: Nuak1
subclass of: SO_0000673
so part of: Nuak1
location: complement(join(1151954..1153104,1156042..1156174,1158243..1158362,1169474..1169539,1171226..1171377,1193261..1193381,1218085..1218327))
location: region:1151954-1218327:-1
so has part: feature:1218085-1218327:-1:exon
so has part: feature:1193261-1193381:-1:exon
so has part: feature:1171226-1171377:-1:exon
so has part: feature:1169474-1169539:-1:exon
so has part: feature:1158243-1158362:-1:exon
so has part: feature:1156042-1156174:-1:exon
so has part: feature:1151954-1153104:-1:exon

XP_036025983.1
type: Protein
SIO_000068: ncbiprotein

position:1151954:-1
position: 1151954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218327:-1
position: 1218327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1218085-1218327:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1193261-1193381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1171226-1171377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1169474-1169539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1158243-1158362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1156042-1156174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151954-1153104:-1:exon

LOC118571256
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118571256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1218326..1222147
location: region:1218326-1222147:1
so has part: feature:1218326-1222147:1:exon
subclass of: SO_0000010

118571256
type: Gene
SIO_000068: ncbigene

position:1218326:1
position: 1218326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222147:1
position: 1222147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1218326-1222147:1:exon

LOC118571256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118571256
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036170213.1
SIO_010081: LOC118571256
subclass of: SO_0000673
so part of: LOC118571256
location: join(1218326..1218420,1218691..1219189,1219851..1222147)
location: region:1218326-1222147:1
so has part: feature:1218326-1218420:1:exon
so has part: feature:1218691-1219189:1:exon
so has part: feature:1219851-1222147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1218326-1218420:1:exon

position:1218420:1
position: 1218420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1218691-1219189:1:exon

position:1218691:1
position: 1218691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219189:1
position: 1219189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1219851-1222147:1:exon

position:1219851:1
position: 1219851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118571256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118571256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MSERGASRAGEGRTRHRGSEWSRLRESRVRSRRTRRRGGAGGERGAGARVSPPPRRATAPGGGGVRAFHPLCGAAQARAAARGALSSPGGDGRSRVGWGGVLSALVPSPGVRHSPSAATAGDLPLAWAHRPRIKLAGPGGRKGDYAQSPGSPGVRVVARGCTLPGPSLVFVMVSRRPPGPRELGEAGERRPGGVGLPAVPPALGLPSVFTPVHLSPYTGLRQQTACATAPSLLPESWPETLQDSNRPPPLCSALHLIIFSPNFIDLFH
SIO_010081: LOC118571256
subclass of: SO_0000673
so part of: LOC118571256
location: join(1218326..1218420,1218691..1219189,1219851..1220063)
location: region:1218326-1220063:1
so has part: feature:1218326-1218420:1:exon
so has part: feature:1218691-1219189:1:exon
so has part: feature:1219851-1220063:1:exon

XP_036026106.1
type: Protein
SIO_000068: ncbiprotein

position:1220063:1
position: 1220063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1218326-1218420:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1218691-1219189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1219851-1220063:1:exon

Ckap4
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Ckap4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1292122..1300428)
location: region:1292122-1300428:-1
so has part: feature:1292122-1300428:-1:exon
subclass of: SO_0000010

118570977
type: Gene
SIO_000068: ncbigene

position:1292122:-1
position: 1292122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1300428:-1
position: 1300428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1292122-1300428:-1:exon

Ckap4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ckap4
product: cytoskeleton associated protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169780.1
SIO_010081: Ckap4
subclass of: SO_0000673
so part of: Ckap4
location: complement(join(1292122..1294505,1299746..1300428))
location: region:1292122-1300428:-1
so has part: feature:1299746-1300428:-1:exon
so has part: feature:1292122-1294505:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1299746-1300428:-1:exon

position:1299746:-1
position: 1299746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1292122-1294505:-1:exon

position:1294505:-1
position: 1294505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ckap4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ckap4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 4
translation: MPSAKQRGSKGGHGAASPSDKGAHPSGGADDVAKKPPPAPQQQPQPPAPHPPQQQPQNQAHRGGHRGRSSAAAAASSSASCSRRLGRLLNFLFYLALVAAAAFSGWCVHHVLEEVQQVRRGHQDFSRQRDELGQSLQGVEQKVQSLQATFGTFESILRSSQHKQDLTEKAVKQGESEINRISEVLQKLQNEILKDLSDGIHVVKDARERDFTSLENTVEERLTELTKSINDNIAIFTDVQKRSQKEINDVKMKVASLEESKGSQDLKILEKALKELQASVKSREKDIEALQSSLQTMESDVYTEVRELVSLKQEQQAFKQAADSERLALEALTEKLLRSEESSSRLPEDIRRLEEELQQLKAEAHGAEEAFVFKDSKALDELQRQIEGLGARLQYVEDGVYSMQVASARHTESLESLLSKSQEYEQRLAMLQEHLESLGSSSDLASTVRSLGEIQLTLAGEVKELQQSVGELPSTVGSLQEQVHSMLSQDQARATGLPPQDFLDRLSSLDNLKSSVSQVESDLKMLRTAVDSLVAYSVKIETNENNLESAKGLLDDLRNDLDRLSVKVEKIHENI
SIO_010081: Ckap4
subclass of: SO_0000673
so part of: Ckap4
location: complement(join(1293204..1294505,1299746..1300171))
location: region:1293204-1300171:-1
so has part: feature:1299746-1300171:-1:exon
so has part: feature:1293204-1294505:-1:exon

XP_036025673.1
type: Protein
SIO_000068: ncbiprotein

position:1293204:-1
position: 1293204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1300171:-1
position: 1300171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1299746-1300171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1293204-1294505:-1:exon

Tcp11l2
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Tcp11l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1344494..1382313
location: region:1344494-1382313:1
so has part: feature:1344494-1382313:1:exon
subclass of: SO_0000010

118571012
type: Gene
SIO_000068: ncbigene

position:1344494:1
position: 1344494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382313:1
position: 1382313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344494-1382313:1:exon

Tcp11l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Tcp11l2
product: t-complex 11 like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169858.1
SIO_010081: Tcp11l2
subclass of: SO_0000673
so part of: Tcp11l2
location: join(1344494..1344650,1351915..1352125,1357133..1357268,1358129..1358249,1359360..1359580,1362943..1363079,1373016..1373197,1373381..1373562,1376660..1376832,1381460..1382313)
location: region:1344494-1382313:1
so has part: feature:1344494-1344650:1:exon
so has part: feature:1351915-1352125:1:exon
so has part: feature:1357133-1357268:1:exon
so has part: feature:1358129-1358249:1:exon
so has part: feature:1359360-1359580:1:exon
so has part: feature:1362943-1363079:1:exon
so has part: feature:1373016-1373197:1:exon
so has part: feature:1373381-1373562:1:exon
so has part: feature:1376660-1376832:1:exon
so has part: feature:1381460-1382313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1344494-1344650:1:exon

position:1344650:1
position: 1344650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1351915-1352125:1:exon

position:1351915:1
position: 1351915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352125:1
position: 1352125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1357133-1357268:1:exon

position:1357133:1
position: 1357133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357268:1
position: 1357268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1358129-1358249:1:exon

position:1358129:1
position: 1358129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1358249:1
position: 1358249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1359360-1359580:1:exon

position:1359360:1
position: 1359360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359580:1
position: 1359580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1362943-1363079:1:exon

position:1362943:1
position: 1362943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1363079:1
position: 1363079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1373016-1373197:1:exon

position:1373016:1
position: 1373016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373197:1
position: 1373197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1373381-1373562:1:exon

position:1373381:1
position: 1373381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373562:1
position: 1373562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1376660-1376832:1:exon

position:1376660:1
position: 1376660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376832:1
position: 1376832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1381460-1382313:1:exon

position:1381460:1
position: 1381460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tcp11l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Tcp11l2
product: t-complex 11 like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_036169859.1
SIO_010081: Tcp11l2
subclass of: SO_0000673
so part of: Tcp11l2
location: join(1344494..1344650,1351959..1352125,1357133..1357268,1358129..1358249,1359360..1359580,1362943..1363079,1373016..1373197,1373381..1373562,1376660..1376832,1381460..1382313)
location: region:1344494-1382313:1
so has part: feature:1344494-1344650:1:exon
so has part: feature:1351959-1352125:1:exon
so has part: feature:1357133-1357268:1:exon
so has part: feature:1358129-1358249:1:exon
so has part: feature:1359360-1359580:1:exon
so has part: feature:1362943-1363079:1:exon
so has part: feature:1373016-1373197:1:exon
so has part: feature:1373381-1373562:1:exon
so has part: feature:1376660-1376832:1:exon
so has part: feature:1381460-1382313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1344494-1344650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1351959-1352125:1:exon

position:1351959:1
position: 1351959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1357133-1357268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358129-1358249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359360-1359580:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1362943-1363079:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1373016-1373197:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1373381-1373562:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1376660-1376832:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1381460-1382313:1:exon

Tcp11l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Tcp11l2
product: t-complex 11 like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_036169860.1
SIO_010081: Tcp11l2
subclass of: SO_0000673
so part of: Tcp11l2
location: join(1344494..1344650,1351915..1352125,1357133..1357268,1358129..1358249,1359360..1359580,1362943..1363079,1373016..1373197,1373381..1373562,1381460..1381523)
location: region:1344494-1381523:1
so has part: feature:1344494-1344650:1:exon
so has part: feature:1351915-1352125:1:exon
so has part: feature:1357133-1357268:1:exon
so has part: feature:1358129-1358249:1:exon
so has part: feature:1359360-1359580:1:exon
so has part: feature:1362943-1363079:1:exon
so has part: feature:1373016-1373197:1:exon
so has part: feature:1373381-1373562:1:exon
so has part: feature:1381460-1381523:1:exon

position:1381523:1
position: 1381523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344494-1344650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1351915-1352125:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357133-1357268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358129-1358249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359360-1359580:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1362943-1363079:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1373016-1373197:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1373381-1373562:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1381460-1381523:1:exon

Tcp11l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Tcp11l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 11-like protein 2 isoform X1
translation: MPLNDEKQCVNDDQQSDSESSRFSESMASLSDYECSRQSFTSDFSSKSSSPASTSPPGGVTFDDVMAAAKNLSDMTLAHEIAVNENFQLKQNALPENSLAGQVKRVVHQAFWDVLEADLNAEPPQYEYAIRLFEEIREILLSFLTPGGNRLHNQICEVLDIDLIRQQAKHSAVDIQGLANYVISTMGKMCAPVRDEDIRELKATTNIVEMLRQIFRVLDLMRLDMTNFVIRNIRPYIQRDLVEYERNKFQGILEETPNALSQTTEWLKESMGEESLSETALAPGAEQSSTPSLSPLLVLNNCYLKLLQWDYQTKVLPETLVTDGTRLQELTEKLNQLKMIACLSLITNNMVGAITEGLPGLANRLKRISAVLLEGMTKETFNLKEALNSIGVQTCAEINKALKERGLLTLNAEVQANLVGQFSSLEEKGNPVCTLMDKRIQLYMKSLLCLPSNQKSMPPVPGGLGVIQQELEVLGCQYANIVNHNKQVYGPFYANIFRQLLFQDEAVGKIETSLPAN
SIO_010081: Tcp11l2
subclass of: SO_0000673
so part of: Tcp11l2
location: join(1351969..1352125,1357133..1357268,1358129..1358249,1359360..1359580,1362943..1363079,1373016..1373197,1373381..1373562,1376660..1376832,1381460..1381704)
location: region:1351969-1381704:1
so has part: feature:1351969-1352125:1:exon
so has part: feature:1357133-1357268:1:exon
so has part: feature:1358129-1358249:1:exon
so has part: feature:1359360-1359580:1:exon
so has part: feature:1362943-1363079:1:exon
so has part: feature:1373016-1373197:1:exon
so has part: feature:1373381-1373562:1:exon
so has part: feature:1376660-1376832:1:exon
so has part: feature:1381460-1381704:1:exon

XP_036025751.1
type: Protein
SIO_000068: ncbiprotein

position:1351969:1
position: 1351969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381704:1
position: 1381704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1351969-1352125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1357133-1357268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1358129-1358249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1359360-1359580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1362943-1363079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373016-1373197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1373381-1373562:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1376660-1376832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1381460-1381704:1:exon

Tcp11l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Tcp11l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 11-like protein 2 isoform X1
translation: MPLNDEKQCVNDDQQSDSESSRFSESMASLSDYECSRQSFTSDFSSKSSSPASTSPPGGVTFDDVMAAAKNLSDMTLAHEIAVNENFQLKQNALPENSLAGQVKRVVHQAFWDVLEADLNAEPPQYEYAIRLFEEIREILLSFLTPGGNRLHNQICEVLDIDLIRQQAKHSAVDIQGLANYVISTMGKMCAPVRDEDIRELKATTNIVEMLRQIFRVLDLMRLDMTNFVIRNIRPYIQRDLVEYERNKFQGILEETPNALSQTTEWLKESMGEESLSETALAPGAEQSSTPSLSPLLVLNNCYLKLLQWDYQTKVLPETLVTDGTRLQELTEKLNQLKMIACLSLITNNMVGAITEGLPGLANRLKRISAVLLEGMTKETFNLKEALNSIGVQTCAEINKALKERGLLTLNAEVQANLVGQFSSLEEKGNPVCTLMDKRIQLYMKSLLCLPSNQKSMPPVPGGLGVIQQELEVLGCQYANIVNHNKQVYGPFYANIFRQLLFQDEAVGKIETSLPAN
SIO_010081: Tcp11l2
subclass of: SO_0000673
so part of: Tcp11l2
location: join(1351969..1352125,1357133..1357268,1358129..1358249,1359360..1359580,1362943..1363079,1373016..1373197,1373381..1373562,1376660..1376832,1381460..1381704)
location: region:1351969-1381704:1
so has part: feature:1351969-1352125:1:exon
so has part: feature:1357133-1357268:1:exon
so has part: feature:1358129-1358249:1:exon
so has part: feature:1359360-1359580:1:exon
so has part: feature:1362943-1363079:1:exon
so has part: feature:1373016-1373197:1:exon
so has part: feature:1373381-1373562:1:exon
so has part: feature:1376660-1376832:1:exon
so has part: feature:1381460-1381704:1:exon

XP_036025752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1351969-1352125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1357133-1357268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1358129-1358249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1359360-1359580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1362943-1363079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373016-1373197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1373381-1373562:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1376660-1376832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1381460-1381704:1:exon

Tcp11l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Tcp11l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 11-like protein 2 isoform X2
translation: MPLNDEKQCVNDDQQSDSESSRFSESMASLSDYECSRQSFTSDFSSKSSSPASTSPPGGVTFDDVMAAAKNLSDMTLAHEIAVNENFQLKQNALPENSLAGQVKRVVHQAFWDVLEADLNAEPPQYEYAIRLFEEIREILLSFLTPGGNRLHNQICEVLDIDLIRQQAKHSAVDIQGLANYVISTMGKMCAPVRDEDIRELKATTNIVEMLRQIFRVLDLMRLDMTNFVIRNIRPYIQRDLVEYERNKFQGILEETPNALSQTTEWLKESMGEESLSETALAPGAEQSSTPSLSPLLVLNNCYLKLLQWDYQTKVLPETLVTDGTRLQELTEKLNQLKMIACLSLITNNMVGAITEGLPGLANRLKRISAVLLEGMTKE
SIO_010081: Tcp11l2
subclass of: SO_0000673
so part of: Tcp11l2
location: join(1351969..1352125,1357133..1357268,1358129..1358249,1359360..1359580,1362943..1363079,1373016..1373197,1373381..1373562,1381460..1381463)
location: region:1351969-1381463:1
so has part: feature:1351969-1352125:1:exon
so has part: feature:1357133-1357268:1:exon
so has part: feature:1358129-1358249:1:exon
so has part: feature:1359360-1359580:1:exon
so has part: feature:1362943-1363079:1:exon
so has part: feature:1373016-1373197:1:exon
so has part: feature:1373381-1373562:1:exon
so has part: feature:1381460-1381463:1:exon

XP_036025753.1
type: Protein
SIO_000068: ncbiprotein

position:1381463:1
position: 1381463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1351969-1352125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1357133-1357268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1358129-1358249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1359360-1359580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1362943-1363079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373016-1373197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1373381-1373562:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1381460-1381463:1:exon

Polr3b
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Polr3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1393387..1528891
location: region:1393387-1528891:1
so has part: feature:1393387-1528891:1:exon
subclass of: SO_0000010

118571019
type: Gene
SIO_000068: ncbigene

position:1393387:1
position: 1393387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1528891:1
position: 1528891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1393387-1528891:1:exon

Polr3b
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 38674
gene: Polr3b
product: RNA polymerase III subunit B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004943281.1
SIO_010081: Polr3b
so part of: Polr3b
location: join(1393387..1393625,1398720..1398752,1398950..1399006,1399084..1399148,1403266..1403341,1404210..1404310,1406603..1406694,1409978..1410095,1411917..1412025,1427818..1427940,1433936..1434055,1436790..1436924,1447653..1447814,1450701..1450901,1452467..1452629,1454435..1454588,1457448..1457522,1458074..1458172,1462220..1462347,1471973..1472182,1474331..1474489,1475712..1475829,1479110..1479252,1498586..1498689,1499145..1499311,1502383..1502496,1505259..1505432,1514120..1514550,1528876..1528891)
location: region:1393387-1528891:1
so has part: feature:1393387-1393625:1:exon
so has part: feature:1398720-1398752:1:exon
so has part: feature:1398950-1399006:1:exon
so has part: feature:1399084-1399148:1:exon
so has part: feature:1403266-1403341:1:exon
so has part: feature:1404210-1404310:1:exon
so has part: feature:1406603-1406694:1:exon
so has part: feature:1409978-1410095:1:exon
so has part: feature:1411917-1412025:1:exon
so has part: feature:1427818-1427940:1:exon
so has part: feature:1433936-1434055:1:exon
so has part: feature:1436790-1436924:1:exon
so has part: feature:1447653-1447814:1:exon
so has part: feature:1450701-1450901:1:exon
so has part: feature:1452467-1452629:1:exon
so has part: feature:1454435-1454588:1:exon
so has part: feature:1457448-1457522:1:exon
so has part: feature:1458074-1458172:1:exon
so has part: feature:1462220-1462347:1:exon
so has part: feature:1471973-1472182:1:exon
so has part: feature:1474331-1474489:1:exon
so has part: feature:1475712-1475829:1:exon
so has part: feature:1479110-1479252:1:exon
so has part: feature:1498586-1498689:1:exon
so has part: feature:1499145-1499311:1:exon
so has part: feature:1502383-1502496:1:exon
so has part: feature:1505259-1505432:1:exon
so has part: feature:1514120-1514550:1:exon
so has part: feature:1528876-1528891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1393387-1393625:1:exon

position:1393625:1
position: 1393625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1398720-1398752:1:exon

position:1398720:1
position: 1398720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398752:1
position: 1398752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1398950-1399006:1:exon

position:1398950:1
position: 1398950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1399006:1
position: 1399006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1399084-1399148:1:exon

position:1399084:1
position: 1399084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1399148:1
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urn:…
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urn:…
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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position:1412025:1
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urn:…
SIO_000300: 10
SIO_000628: feature:1427818-1427940:1:exon

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position:1427940:1
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urn:…
SIO_000300: 11
SIO_000628: feature:1433936-1434055:1:exon

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position:1434055:1
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urn:…
SIO_000300: 12
SIO_000628: feature:1436790-1436924:1:exon

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position:1436924:1
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urn:…
SIO_000300: 13
SIO_000628: feature:1447653-1447814:1:exon

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position:1447814:1
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urn:…
SIO_000300: 14
SIO_000628: feature:1450701-1450901:1:exon

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position:1450901:1
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urn:…
SIO_000300: 15
SIO_000628: feature:1452467-1452629:1:exon

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position:1452629:1
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urn:…
SIO_000300: 16
SIO_000628: feature:1454435-1454588:1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:1457448-1457522:1:exon

position:1457448:1
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position:1457522:1
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urn:…
SIO_000300: 18
SIO_000628: feature:1458074-1458172:1:exon

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position:1458172:1
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urn:…
SIO_000300: 19
SIO_000628: feature:1462220-1462347:1:exon

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position:1462347:1
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urn:…
SIO_000300: 20
SIO_000628: feature:1471973-1472182:1:exon

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position:1472182:1
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urn:…
SIO_000300: 21
SIO_000628: feature:1474331-1474489:1:exon

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position:1474489:1
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urn:…
SIO_000300: 22
SIO_000628: feature:1475712-1475829:1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:1479110-1479252:1:exon

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position:1479252:1
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urn:…
SIO_000300: 24
SIO_000628: feature:1498586-1498689:1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:1499145-1499311:1:exon

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urn:…
SIO_000300: 26
SIO_000628: feature:1502383-1502496:1:exon

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position:1502496:1
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urn:…
SIO_000300: 27
SIO_000628: feature:1505259-1505432:1:exon

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urn:…
SIO_000300: 28
SIO_000628: feature:1514120-1514550:1:exon

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urn:…
SIO_000300: 29
SIO_000628: feature:1528876-1528891:1:exon

position:1528876:1
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reference: sequence
type: ForwardStrandPosition
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Polr3b
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 38674
gene: Polr3b
product: RNA polymerase III subunit B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004943280.1
SIO_010081: Polr3b
so part of: Polr3b
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location: region:1393387-1517255:1
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position:1517255:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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SIO_000300: 4
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SIO_000300: 6
SIO_000628: feature:1404210-1404310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1406603-1406694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1409978-1410095:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1411917-1412025:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1427818-1427940:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1433936-1434055:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1436790-1436924:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1447653-1447814:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1450701-1450901:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1452467-1452629:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1454435-1454588:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1457448-1457522:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1458074-1458172:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1462220-1462347:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1471973-1472182:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1474331-1474489:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1475712-1475829:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1479110-1479252:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1498586-1498689:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1499145-1499311:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1502383-1502496:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1505259-1505432:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1514120-1514550:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1515540-1517255:1:exon

position:1515540:1
position: 1515540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Polr3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Polr3b
product: RNA polymerase III subunit B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_036169878.1
SIO_010081: Polr3b
subclass of: SO_0000673
so part of: Polr3b
location: join(1393387..1393625,1398720..1398752,1398950..1399006,1399084..1399148,1403266..1403341,1404210..1404310,1406603..1406694,1409978..1410095,1411917..1412025,1427818..1427940,1433936..1434055,1436790..1436924,1447653..1447814,1450701..1450901,1452467..1452629,1454435..1454588,1457448..1457522,1458074..1458172,1462220..1462347,1471973..1472182,1474331..1474489,1475712..1475829,1479110..1479252,1498586..1498689,1499145..1499311,1502383..1502496,1505259..1505432,1514120..1515533)
location: region:1393387-1515533:1
so has part: feature:1393387-1393625:1:exon
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so has part: feature:1458074-1458172:1:exon
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so has part: feature:1498586-1498689:1:exon
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so has part: feature:1505259-1505432:1:exon
so has part: feature:1514120-1515533:1:exon

position:1515533:1
position: 1515533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1393387-1393625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1398720-1398752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1398950-1399006:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1399084-1399148:1:exon

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SIO_000300: 5
SIO_000628: feature:1403266-1403341:1:exon

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SIO_000300: 6
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SIO_000300: 7
SIO_000628: feature:1406603-1406694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1409978-1410095:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1411917-1412025:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1427818-1427940:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1433936-1434055:1:exon

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SIO_000300: 12
SIO_000628: feature:1436790-1436924:1:exon

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SIO_000300: 13
SIO_000628: feature:1447653-1447814:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1450701-1450901:1:exon

urn:…
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urn:…
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SIO_000628: feature:1454435-1454588:1:exon

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SIO_000300: 18
SIO_000628: feature:1458074-1458172:1:exon

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SIO_000628: feature:1462220-1462347:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1471973-1472182:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1474331-1474489:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1475712-1475829:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1479110-1479252:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1498586-1498689:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1499145-1499311:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1502383-1502496:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1505259-1505432:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1514120-1515533:1:exon

Polr3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Polr3b
product: RNA polymerase III subunit B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_036169879.1
SIO_010081: Polr3b
subclass of: SO_0000673
so part of: Polr3b
location: join(1393435..1393625,1398720..1398752,1398950..1399006,1399084..1399148,1406603..1406694,1409978..1410095,1411917..1412025,1427818..1427940,1433936..1434055,1436790..1436924,1447653..1447814,1450701..1450901,1452467..1452629,1454435..1454588,1457448..1457522,1458074..1458172,1462220..1462347,1471973..1472182,1474331..1474489,1475712..1475829,1479110..1479252,1498586..1498689,1499145..1499311,1502383..1502496,1505259..1505432,1514120..1515533)
location: region:1393435-1515533:1
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so has part: feature:1514120-1515533:1:exon

position:1393435:1
position: 1393435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1393435-1393625:1:exon

urn:…
SIO_000300: 2
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SIO_000300: 3
SIO_000628: feature:1398950-1399006:1:exon

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urn:…
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urn:…
SIO_000300: 13
SIO_000628: feature:1452467-1452629:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1454435-1454588:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1457448-1457522:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1458074-1458172:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1462220-1462347:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1471973-1472182:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1474331-1474489:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1475712-1475829:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1479110-1479252:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1498586-1498689:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1499145-1499311:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1502383-1502496:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1505259-1505432:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1514120-1515533:1:exon

Polr3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Polr3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase III subunit RPC2 isoform X1
translation: MDVLAEEFGSLTPEQLAAPVPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAGNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIRDHKKLVSTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKRQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHTINKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQIPLEGSSVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSGHVSSLRIPYACKLLFQELQSMNIIPRLKLAKYNE
SIO_010081: Polr3b
subclass of: SO_0000673
so part of: Polr3b
location: join(1393554..1393625,1398720..1398752,1398950..1399006,1399084..1399148,1403266..1403341,1404210..1404310,1406603..1406694,1409978..1410095,1411917..1412025,1427818..1427940,1433936..1434055,1436790..1436924,1447653..1447814,1450701..1450901,1452467..1452629,1454435..1454588,1457448..1457522,1458074..1458172,1462220..1462347,1471973..1472182,1474331..1474489,1475712..1475829,1479110..1479252,1498586..1498689,1499145..1499311,1502383..1502496,1505259..1505432,1514120..1514249)
location: region:1393554-1514249:1
so has part: feature:1393554-1393625:1:exon
so has part: feature:1398720-1398752:1:exon
so has part: feature:1398950-1399006:1:exon
so has part: feature:1399084-1399148:1:exon
so has part: feature:1403266-1403341:1:exon
so has part: feature:1404210-1404310:1:exon
so has part: feature:1406603-1406694:1:exon
so has part: feature:1409978-1410095:1:exon
so has part: feature:1411917-1412025:1:exon
so has part: feature:1427818-1427940:1:exon
so has part: feature:1433936-1434055:1:exon
so has part: feature:1436790-1436924:1:exon
so has part: feature:1447653-1447814:1:exon
so has part: feature:1450701-1450901:1:exon
so has part: feature:1452467-1452629:1:exon
so has part: feature:1454435-1454588:1:exon
so has part: feature:1457448-1457522:1:exon
so has part: feature:1458074-1458172:1:exon
so has part: feature:1462220-1462347:1:exon
so has part: feature:1471973-1472182:1:exon
so has part: feature:1474331-1474489:1:exon
so has part: feature:1475712-1475829:1:exon
so has part: feature:1479110-1479252:1:exon
so has part: feature:1498586-1498689:1:exon
so has part: feature:1499145-1499311:1:exon
so has part: feature:1502383-1502496:1:exon
so has part: feature:1505259-1505432:1:exon
so has part: feature:1514120-1514249:1:exon

XP_036025771.1
type: Protein
SIO_000068: ncbiprotein

position:1393554:1
position: 1393554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514249:1
position: 1514249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1393554-1393625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1398720-1398752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1398950-1399006:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1399084-1399148:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1403266-1403341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1404210-1404310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1406603-1406694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1409978-1410095:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1411917-1412025:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1427818-1427940:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1433936-1434055:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1436790-1436924:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1447653-1447814:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1450701-1450901:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1452467-1452629:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1454435-1454588:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1457448-1457522:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1458074-1458172:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1462220-1462347:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1471973-1472182:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1474331-1474489:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1475712-1475829:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1479110-1479252:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1498586-1498689:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1499145-1499311:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1502383-1502496:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1505259-1505432:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1514120-1514249:1:exon

Polr3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Polr3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase III subunit RPC2 isoform X2
translation: MDVLAEEFGSLTPEQLAAPVPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKANEKVTSDADPMWYLKMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAGNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIRDHKKLVSTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKRQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHTINKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQIPLEGSSVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSGHVSSLRIPYACKLLFQELQSMNIIPRLKLAKYNE
SIO_010081: Polr3b
subclass of: SO_0000673
so part of: Polr3b
location: join(1393554..1393625,1398720..1398752,1398950..1399006,1399084..1399148,1406603..1406694,1409978..1410095,1411917..1412025,1427818..1427940,1433936..1434055,1436790..1436924,1447653..1447814,1450701..1450901,1452467..1452629,1454435..1454588,1457448..1457522,1458074..1458172,1462220..1462347,1471973..1472182,1474331..1474489,1475712..1475829,1479110..1479252,1498586..1498689,1499145..1499311,1502383..1502496,1505259..1505432,1514120..1514249)
location: region:1393554-1514249:1
so has part: feature:1393554-1393625:1:exon
so has part: feature:1398720-1398752:1:exon
so has part: feature:1398950-1399006:1:exon
so has part: feature:1399084-1399148:1:exon
so has part: feature:1406603-1406694:1:exon
so has part: feature:1409978-1410095:1:exon
so has part: feature:1411917-1412025:1:exon
so has part: feature:1427818-1427940:1:exon
so has part: feature:1433936-1434055:1:exon
so has part: feature:1436790-1436924:1:exon
so has part: feature:1447653-1447814:1:exon
so has part: feature:1450701-1450901:1:exon
so has part: feature:1452467-1452629:1:exon
so has part: feature:1454435-1454588:1:exon
so has part: feature:1457448-1457522:1:exon
so has part: feature:1458074-1458172:1:exon
so has part: feature:1462220-1462347:1:exon
so has part: feature:1471973-1472182:1:exon
so has part: feature:1474331-1474489:1:exon
so has part: feature:1475712-1475829:1:exon
so has part: feature:1479110-1479252:1:exon
so has part: feature:1498586-1498689:1:exon
so has part: feature:1499145-1499311:1:exon
so has part: feature:1502383-1502496:1:exon
so has part: feature:1505259-1505432:1:exon
so has part: feature:1514120-1514249:1:exon

XP_036025772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1393554-1393625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1398720-1398752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1398950-1399006:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1399084-1399148:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1406603-1406694:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1409978-1410095:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1411917-1412025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1427818-1427940:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1433936-1434055:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1436790-1436924:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1447653-1447814:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1450701-1450901:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1452467-1452629:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1454435-1454588:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1457448-1457522:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1458074-1458172:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1462220-1462347:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1471973-1472182:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1474331-1474489:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1475712-1475829:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1479110-1479252:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1498586-1498689:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1499145-1499311:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1502383-1502496:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1505259-1505432:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1514120-1514249:1:exon

Rfx4
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Rfx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1536609..1682244
location: region:1536609-1682244:1
so has part: feature:1536609-1682244:1:exon
subclass of: SO_0000010

118570943
type: Gene
SIO_000068: ncbigene

position:1536609:1
position: 1536609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682244:1
position: 1682244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1536609-1682244:1:exon

Rfx4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Rfx4
product: regulatory factor X4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169693.1
SIO_010081: Rfx4
subclass of: SO_0000673
so part of: Rfx4
location: join(1536609..1537063,1559642..1559728,1574251..1574311,1588316..1588439,1603489..1603550,1608144..1608357,1609023..1609100,1614242..1614405,1636271..1636371,1638319..1638377,1641282..1641426,1646587..1646681,1647092..1647209,1656329..1656448,1656753..1656914,1669717..1669879,1671446..1671584,1680636..1682244)
location: region:1536609-1682244:1
so has part: feature:1536609-1537063:1:exon
so has part: feature:1559642-1559728:1:exon
so has part: feature:1574251-1574311:1:exon
so has part: feature:1588316-1588439:1:exon
so has part: feature:1603489-1603550:1:exon
so has part: feature:1608144-1608357:1:exon
so has part: feature:1609023-1609100:1:exon
so has part: feature:1614242-1614405:1:exon
so has part: feature:1636271-1636371:1:exon
so has part: feature:1638319-1638377:1:exon
so has part: feature:1641282-1641426:1:exon
so has part: feature:1646587-1646681:1:exon
so has part: feature:1647092-1647209:1:exon
so has part: feature:1656329-1656448:1:exon
so has part: feature:1656753-1656914:1:exon
so has part: feature:1669717-1669879:1:exon
so has part: feature:1671446-1671584:1:exon
so has part: feature:1680636-1682244:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1536609-1537063:1:exon

position:1537063:1
position: 1537063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1559642-1559728:1:exon

position:1559642:1
position: 1559642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1559728:1
position: 1559728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1574251-1574311:1:exon

position:1574251:1
position: 1574251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574311:1
position: 1574311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1588316-1588439:1:exon

position:1588316:1
position: 1588316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588439:1
position: 1588439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1603489-1603550:1:exon

position:1603489:1
position: 1603489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1603550:1
position: 1603550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1608144-1608357:1:exon

position:1608144:1
position: 1608144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1608357:1
position: 1608357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1609023-1609100:1:exon

position:1609023:1
position: 1609023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1609100:1
position: 1609100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1614242-1614405:1:exon

position:1614242:1
position: 1614242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1614405:1
position: 1614405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1636271-1636371:1:exon

position:1636271:1
position: 1636271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1636371:1
position: 1636371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1638319-1638377:1:exon

position:1638319:1
position: 1638319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1638377:1
position: 1638377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1641282-1641426:1:exon

position:1641282:1
position: 1641282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1641426:1
position: 1641426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1646587-1646681:1:exon

position:1646587:1
position: 1646587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1646681:1
position: 1646681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1647092-1647209:1:exon

position:1647092:1
position: 1647092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1647209:1
position: 1647209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1656329-1656448:1:exon

position:1656329:1
position: 1656329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1656448:1
position: 1656448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1656753-1656914:1:exon

position:1656753:1
position: 1656753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1656914:1
position: 1656914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1669717-1669879:1:exon

position:1669717:1
position: 1669717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1669879:1
position: 1669879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1671446-1671584:1:exon

position:1671446:1
position: 1671446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1671584:1
position: 1671584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1680636-1682244:1:exon

position:1680636:1
position: 1680636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rfx4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Rfx4
product: regulatory factor X4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_036169694.1
SIO_010081: Rfx4
subclass of: SO_0000673
so part of: Rfx4
location: join(1536609..1537063,1559642..1559728,1574251..1574311,1588316..1588439,1603489..1603550,1608144..1608357,1609023..1609100,1614242..1614405,1636271..1636371,1638319..1638377,1641282..1641426,1646587..1646681,1647092..1647209,1656329..1656448,1656753..1656914,1669717..1669879,1671446..1671584,1680650..1680725)
location: region:1536609-1680725:1
so has part: feature:1536609-1537063:1:exon
so has part: feature:1559642-1559728:1:exon
so has part: feature:1574251-1574311:1:exon
so has part: feature:1588316-1588439:1:exon
so has part: feature:1603489-1603550:1:exon
so has part: feature:1608144-1608357:1:exon
so has part: feature:1609023-1609100:1:exon
so has part: feature:1614242-1614405:1:exon
so has part: feature:1636271-1636371:1:exon
so has part: feature:1638319-1638377:1:exon
so has part: feature:1641282-1641426:1:exon
so has part: feature:1646587-1646681:1:exon
so has part: feature:1647092-1647209:1:exon
so has part: feature:1656329-1656448:1:exon
so has part: feature:1656753-1656914:1:exon
so has part: feature:1669717-1669879:1:exon
so has part: feature:1671446-1671584:1:exon
so has part: feature:1680650-1680725:1:exon

position:1680725:1
position: 1680725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1536609-1537063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1559642-1559728:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1574251-1574311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1588316-1588439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1603489-1603550:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1608144-1608357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1609023-1609100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1614242-1614405:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1636271-1636371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1638319-1638377:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1641282-1641426:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1646587-1646681:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1647092-1647209:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1656329-1656448:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1656753-1656914:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1669717-1669879:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1671446-1671584:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1680650-1680725:1:exon

position:1680650:1
position: 1680650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rfx4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Rfx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor RFX4 isoform X1
translation: MHCGLLEEPDMDSTESWIERCLNESENKRYPSHTSLGNVSNDENEEKENNRASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKREVTKQTVAYSPRSKLGTLLPDFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFATQLDEWLKVALHDLPENLRNTKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEHRRLIIQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAEVQEEIILTEAAPPTPSPVPSFSPAKSATSVEVPPPSSPASNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRSTHVPSSSVTHRIPVYSHREEHGYTGSYNYGSYSNQHPHPMQSQYPALPHDTAISGPLHYSPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVPPRWPEAPTANACYTSPSVHSTRYGSSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTGWAK
SIO_010081: Rfx4
subclass of: SO_0000673
so part of: Rfx4
location: join(1537021..1537063,1559642..1559728,1574251..1574311,1588316..1588439,1603489..1603550,1608144..1608357,1609023..1609100,1614242..1614405,1636271..1636371,1638319..1638377,1641282..1641426,1646587..1646681,1647092..1647209,1656329..1656448,1656753..1656914,1669717..1669879,1671446..1671584,1680636..1680908)
location: region:1537021-1680908:1
so has part: feature:1537021-1537063:1:exon
so has part: feature:1559642-1559728:1:exon
so has part: feature:1574251-1574311:1:exon
so has part: feature:1588316-1588439:1:exon
so has part: feature:1603489-1603550:1:exon
so has part: feature:1608144-1608357:1:exon
so has part: feature:1609023-1609100:1:exon
so has part: feature:1614242-1614405:1:exon
so has part: feature:1636271-1636371:1:exon
so has part: feature:1638319-1638377:1:exon
so has part: feature:1641282-1641426:1:exon
so has part: feature:1646587-1646681:1:exon
so has part: feature:1647092-1647209:1:exon
so has part: feature:1656329-1656448:1:exon
so has part: feature:1656753-1656914:1:exon
so has part: feature:1669717-1669879:1:exon
so has part: feature:1671446-1671584:1:exon
so has part: feature:1680636-1680908:1:exon

XP_036025586.1
type: Protein
SIO_000068: ncbiprotein

position:1537021:1
position: 1537021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1680908:1
position: 1680908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1537021-1537063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1559642-1559728:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1574251-1574311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1588316-1588439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1603489-1603550:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1608144-1608357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1609023-1609100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1614242-1614405:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1636271-1636371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1638319-1638377:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1641282-1641426:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1646587-1646681:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1647092-1647209:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1656329-1656448:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1656753-1656914:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1669717-1669879:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1671446-1671584:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1680636-1680908:1:exon

Rfx4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Rfx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor RFX4 isoform X2
translation: MHCGLLEEPDMDSTESWIERCLNESENKRYPSHTSLGNVSNDENEEKENNRASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKREVTKQTVAYSPRSKLGTLLPDFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFATQLDEWLKVALHDLPENLRNTKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEHRRLIIQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAEVQEEIILTEAAPPTPSPVPSFSPAKSATSVEVPPPSSPASNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRSTHVPSSSVTHRIPVYSHREEHGYTGSYNYGSYSNQHPHPMQSQYPALPHDTAISGPLHYSPYHRSSAQPHF
SIO_010081: Rfx4
subclass of: SO_0000673
so part of: Rfx4
location: join(1537021..1537063,1559642..1559728,1574251..1574311,1588316..1588439,1603489..1603550,1608144..1608357,1609023..1609100,1614242..1614405,1636271..1636371,1638319..1638377,1641282..1641426,1646587..1646681,1647092..1647209,1656329..1656448,1656753..1656914,1669717..1669879,1671446..1671584,1680650..1680661)
location: region:1537021-1680661:1
so has part: feature:1537021-1537063:1:exon
so has part: feature:1559642-1559728:1:exon
so has part: feature:1574251-1574311:1:exon
so has part: feature:1588316-1588439:1:exon
so has part: feature:1603489-1603550:1:exon
so has part: feature:1608144-1608357:1:exon
so has part: feature:1609023-1609100:1:exon
so has part: feature:1614242-1614405:1:exon
so has part: feature:1636271-1636371:1:exon
so has part: feature:1638319-1638377:1:exon
so has part: feature:1641282-1641426:1:exon
so has part: feature:1646587-1646681:1:exon
so has part: feature:1647092-1647209:1:exon
so has part: feature:1656329-1656448:1:exon
so has part: feature:1656753-1656914:1:exon
so has part: feature:1669717-1669879:1:exon
so has part: feature:1671446-1671584:1:exon
so has part: feature:1680650-1680661:1:exon

XP_036025587.1
type: Protein
SIO_000068: ncbiprotein

position:1680661:1
position: 1680661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1537021-1537063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1559642-1559728:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1574251-1574311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1588316-1588439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1603489-1603550:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1608144-1608357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1609023-1609100:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1614242-1614405:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1636271-1636371:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1638319-1638377:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1641282-1641426:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1646587-1646681:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1647092-1647209:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1656329-1656448:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1656753-1656914:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1669717-1669879:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1671446-1671584:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1680650-1680661:1:exon

Ric8b
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Ric8b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1692467..1797068
location: region:1692467-1797068:1
so has part: feature:1692467-1797068:1:exon
subclass of: SO_0000010

118570944
type: Gene
SIO_000068: ncbigene

position:1692467:1
position: 1692467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1797068:1
position: 1797068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1692467-1797068:1:exon

Ric8b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ric8b
product: RIC8 guanine nucleotide exchange factor B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_036169695.1
SIO_010081: Ric8b
subclass of: SO_0000673
so part of: Ric8b
location: join(1692467..1693014,1700345..1700392,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1780440..1780559,1793763..1797068)
location: region:1692467-1797068:1
so has part: feature:1692467-1693014:1:exon
so has part: feature:1700345-1700392:1:exon
so has part: feature:1723732-1724340:1:exon
so has part: feature:1733664-1733758:1:exon
so has part: feature:1746844-1747072:1:exon
so has part: feature:1747769-1747864:1:exon
so has part: feature:1756875-1757019:1:exon
so has part: feature:1769509-1769653:1:exon
so has part: feature:1780440-1780559:1:exon
so has part: feature:1793763-1797068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1692467-1693014:1:exon

position:1693014:1
position: 1693014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1700345-1700392:1:exon

position:1700345:1
position: 1700345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1700392:1
position: 1700392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1723732-1724340:1:exon

position:1723732:1
position: 1723732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1724340:1
position: 1724340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1733664-1733758:1:exon

position:1733664:1
position: 1733664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1733758:1
position: 1733758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1746844-1747072:1:exon

position:1746844:1
position: 1746844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1747072:1
position: 1747072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1747769-1747864:1:exon

position:1747769:1
position: 1747769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1747864:1
position: 1747864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1756875-1757019:1:exon

position:1756875:1
position: 1756875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1757019:1
position: 1757019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1769509-1769653:1:exon

position:1769509:1
position: 1769509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1769653:1
position: 1769653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1780440-1780559:1:exon

position:1780440:1
position: 1780440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1780559:1
position: 1780559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1793763-1797068:1:exon

position:1793763:1
position: 1793763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ric8b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ric8b
product: RIC8 guanine nucleotide exchange factor B, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169699.1
SIO_010081: Ric8b
subclass of: SO_0000673
so part of: Ric8b
location: join(1692467..1693014,1700345..1700392,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1793763..1797068)
location: region:1692467-1797068:1
so has part: feature:1692467-1693014:1:exon
so has part: feature:1700345-1700392:1:exon
so has part: feature:1723732-1724340:1:exon
so has part: feature:1733664-1733758:1:exon
so has part: feature:1746844-1747072:1:exon
so has part: feature:1747769-1747864:1:exon
so has part: feature:1756875-1757019:1:exon
so has part: feature:1769509-1769653:1:exon
so has part: feature:1793763-1797068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1692467-1693014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1700345-1700392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723732-1724340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1733664-1733758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1746844-1747072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1747769-1747864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1756875-1757019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1769509-1769653:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1793763-1797068:1:exon

Ric8b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ric8b
product: RIC8 guanine nucleotide exchange factor B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_036169696.1
SIO_010081: Ric8b
subclass of: SO_0000673
so part of: Ric8b
location: join(1692467..1693014,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1780440..1780559,1793763..1797068)
location: region:1692467-1797068:1
so has part: feature:1692467-1693014:1:exon
so has part: feature:1723732-1724340:1:exon
so has part: feature:1733664-1733758:1:exon
so has part: feature:1746844-1747072:1:exon
so has part: feature:1747769-1747864:1:exon
so has part: feature:1756875-1757019:1:exon
so has part: feature:1769509-1769653:1:exon
so has part: feature:1780440-1780559:1:exon
so has part: feature:1793763-1797068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1692467-1693014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1723732-1724340:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1733664-1733758:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1746844-1747072:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1747769-1747864:1:exon

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urn:…
SIO_000300: 9
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Ric8b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ric8b
product: RIC8 guanine nucleotide exchange factor B, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_036169700.1
SIO_010081: Ric8b
subclass of: SO_0000673
so part of: Ric8b
location: join(1692467..1693014,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1793763..1797068)
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urn:…
SIO_000300: 8
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Ric8b
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 38674
gene: Ric8b
product: RIC8 guanine nucleotide exchange factor B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004943270.1
SIO_010081: Ric8b
so part of: Ric8b
location: join(1692467..1693014,1700345..1700392,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1780440..1780559,1790519..1790702,1793763..1793825)
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position:1793825:1
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urn:…
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Ric8b
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 38674
gene: Ric8b
product: RIC8 guanine nucleotide exchange factor B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004943271.1
SIO_010081: Ric8b
so part of: Ric8b
location: join(1692467..1693014,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1780440..1780559,1790519..1790702,1793763..1793825)
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Ric8b
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 38674
gene: Ric8b
product: RIC8 guanine nucleotide exchange factor B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004943272.1
SIO_010081: Ric8b
so part of: Ric8b
location: join(1692467..1693014,1700345..1700392,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1780440..1780559,1783570..1783653,1787311..1788206,1793763..1793818)
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urn:…
SIO_000300: 1
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SIO_000300: 12
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Ric8b
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 38674
gene: Ric8b
product: RIC8 guanine nucleotide exchange factor B, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004943274.1
SIO_010081: Ric8b
so part of: Ric8b
location: join(1692467..1693014,1700345..1700392,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1780440..1780559,1783570..1783653,1787311..1787449,1788031..1788206,1793763..1793818)
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Ric8b
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 38674
gene: Ric8b
product: RIC8 guanine nucleotide exchange factor B, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004943275.1
SIO_010081: Ric8b
so part of: Ric8b
location: join(1692467..1693014,1700345..1700392,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1780440..1780559,1787311..1788206,1793763..1793818)
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Ric8b
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 38674
gene: Ric8b
product: RIC8 guanine nucleotide exchange factor B, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004943276.1
SIO_010081: Ric8b
so part of: Ric8b
location: join(1692467..1693014,1700345..1700392,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1780440..1780559,1787311..1787449,1788031..1788206,1793763..1793818)
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Ric8b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ric8b
product: RIC8 guanine nucleotide exchange factor B, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_036169697.1
SIO_010081: Ric8b
subclass of: SO_0000673
so part of: Ric8b
location: join(1692467..1693014,1700345..1700392,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1780440..1780559,1783570..1783653,1793763..1793810)
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Ric8b
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 38674
gene: Ric8b
product: RIC8 guanine nucleotide exchange factor B, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004943273.1
SIO_010081: Ric8b
so part of: Ric8b
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urn:…
SIO_000300: 4
SIO_000628: feature:1733664-1733758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1746844-1747072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1747769-1747864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1756875-1757019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1769509-1769653:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1780440-1780559:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1783570-1783653:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1787311-1788206:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1790519-1790574:1:exon

Ric8b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ric8b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synembryn-B isoform X1
translation: MDEERALYIVRAGEAGAIERVLRDYSDKHRATFKFESTDEDKRKKLCEGIFKVLVKDVPTTCQVSCLEVLRILSRDKKILVPVTTKENMQILLRLAKLHESDDSLEKVSEFPVIVESLKCLCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKYINDIKCFDLRLLFLLSLLHTDIRSQLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVDSWKVHKESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPLTHEETAQEAATLDELPSDKTTEKDTALKNNTLVYNGMNMEAIYVLLNFMEKRIDKGSSYREGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGVKQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLITGHLEEPMPNPIDDMTEEQKEYEAMKLVNMLDKLSREELLKPMGLKPDGTITPLEEALSQYSVIEETSSDTD
SIO_010081: Ric8b
subclass of: SO_0000673
so part of: Ric8b
location: join(1692931..1693014,1700345..1700392,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1780440..1780559,1793763..1793874)
location: region:1692931-1793874:1
so has part: feature:1692931-1693014:1:exon
so has part: feature:1700345-1700392:1:exon
so has part: feature:1723732-1724340:1:exon
so has part: feature:1733664-1733758:1:exon
so has part: feature:1746844-1747072:1:exon
so has part: feature:1747769-1747864:1:exon
so has part: feature:1756875-1757019:1:exon
so has part: feature:1769509-1769653:1:exon
so has part: feature:1780440-1780559:1:exon
so has part: feature:1793763-1793874:1:exon

XP_036025588.1
type: Protein
SIO_000068: ncbiprotein

position:1692931:1
position: 1692931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1793874:1
position: 1793874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1692931-1693014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1700345-1700392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723732-1724340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1733664-1733758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1746844-1747072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1747769-1747864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1756875-1757019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1769509-1769653:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1780440-1780559:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1793763-1793874:1:exon

Ric8b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ric8b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synembryn-B isoform X4
translation: MDEERALYIVRAGEAGAIERVLRDYSDKHRATFKFESTDEDKRKKLCEGIFKVLVKDVPTTCQVSCLEVLRILSRDKKILVPVTTKENMQILLRLAKLHESDDSLEKVSEFPVIVESLKCLCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKYINDIKCFDLRLLFLLSLLHTDIRSQLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVDSWKVHKESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPLTHEETAQEAATLDELPSDKTTEKDTALKNNTLVYNGMNMEAIYVLLNFMEKRIDKGSSYREGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGVKQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPKEELLKPMGLKPDGTITPLEEALSQYSVIEETSSDTD
SIO_010081: Ric8b
subclass of: SO_0000673
so part of: Ric8b
location: join(1692931..1693014,1700345..1700392,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1793763..1793874)
location: region:1692931-1793874:1
so has part: feature:1692931-1693014:1:exon
so has part: feature:1700345-1700392:1:exon
so has part: feature:1723732-1724340:1:exon
so has part: feature:1733664-1733758:1:exon
so has part: feature:1746844-1747072:1:exon
so has part: feature:1747769-1747864:1:exon
so has part: feature:1756875-1757019:1:exon
so has part: feature:1769509-1769653:1:exon
so has part: feature:1793763-1793874:1:exon

XP_036025592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1692931-1693014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1700345-1700392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723732-1724340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1733664-1733758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1746844-1747072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1747769-1747864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1756875-1757019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1769509-1769653:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1793763-1793874:1:exon

Ric8b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ric8b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synembryn-B isoform X2
translation: MDEERALYIVRAGEAGAIERVLRDYSDKKLCEGIFKVLVKDVPTTCQVSCLEVLRILSRDKKILVPVTTKENMQILLRLAKLHESDDSLEKVSEFPVIVESLKCLCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKYINDIKCFDLRLLFLLSLLHTDIRSQLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVDSWKVHKESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPLTHEETAQEAATLDELPSDKTTEKDTALKNNTLVYNGMNMEAIYVLLNFMEKRIDKGSSYREGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGVKQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLITGHLEEPMPNPIDDMTEEQKEYEAMKLVNMLDKLSREELLKPMGLKPDGTITPLEEALSQYSVIEETSSDTD
SIO_010081: Ric8b
subclass of: SO_0000673
so part of: Ric8b
location: join(1692931..1693014,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1780440..1780559,1793763..1793874)
location: region:1692931-1793874:1
so has part: feature:1692931-1693014:1:exon
so has part: feature:1723732-1724340:1:exon
so has part: feature:1733664-1733758:1:exon
so has part: feature:1746844-1747072:1:exon
so has part: feature:1747769-1747864:1:exon
so has part: feature:1756875-1757019:1:exon
so has part: feature:1769509-1769653:1:exon
so has part: feature:1780440-1780559:1:exon
so has part: feature:1793763-1793874:1:exon

XP_036025589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1692931-1693014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1723732-1724340:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1733664-1733758:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1746844-1747072:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1747769-1747864:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1756875-1757019:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1769509-1769653:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1780440-1780559:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1793763-1793874:1:exon

Ric8b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ric8b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synembryn-B isoform X5
translation: MDEERALYIVRAGEAGAIERVLRDYSDKKLCEGIFKVLVKDVPTTCQVSCLEVLRILSRDKKILVPVTTKENMQILLRLAKLHESDDSLEKVSEFPVIVESLKCLCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKYINDIKCFDLRLLFLLSLLHTDIRSQLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVDSWKVHKESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPLTHEETAQEAATLDELPSDKTTEKDTALKNNTLVYNGMNMEAIYVLLNFMEKRIDKGSSYREGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGVKQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPKEELLKPMGLKPDGTITPLEEALSQYSVIEETSSDTD
SIO_010081: Ric8b
subclass of: SO_0000673
so part of: Ric8b
location: join(1692931..1693014,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1793763..1793874)
location: region:1692931-1793874:1
so has part: feature:1692931-1693014:1:exon
so has part: feature:1723732-1724340:1:exon
so has part: feature:1733664-1733758:1:exon
so has part: feature:1746844-1747072:1:exon
so has part: feature:1747769-1747864:1:exon
so has part: feature:1756875-1757019:1:exon
so has part: feature:1769509-1769653:1:exon
so has part: feature:1793763-1793874:1:exon

XP_036025593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1692931-1693014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1723732-1724340:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1733664-1733758:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1746844-1747072:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1747769-1747864:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1756875-1757019:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1769509-1769653:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1793763-1793874:1:exon

Ric8b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ric8b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synembryn-B isoform X3
translation: MDEERALYIVRAGEAGAIERVLRDYSDKHRATFKFESTDEDKRKKLCEGIFKVLVKDVPTTCQVSCLEVLRILSRDKKILVPVTTKENMQILLRLAKLHESDDSLEKVSEFPVIVESLKCLCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKYINDIKCFDLRLLFLLSLLHTDIRSQLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVDSWKVHKESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPLTHEETAQEAATLDELPSDKTTEKDTALKNNTLVYNGMNMEAIYVLLNFMEKRIDKGSSYREGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGVKQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLITGHLEEPMPNPIDDMTEEQKEYEAMKLVNMLDKLSRRADVKALHQDGG
SIO_010081: Ric8b
subclass of: SO_0000673
so part of: Ric8b
location: join(1692931..1693014,1700345..1700392,1723732..1724340,1733664..1733758,1746844..1747072,1747769..1747864,1756875..1757019,1769509..1769653,1780440..1780559,1783570..1783609)
location: region:1692931-1783609:1
so has part: feature:1692931-1693014:1:exon
so has part: feature:1700345-1700392:1:exon
so has part: feature:1723732-1724340:1:exon
so has part: feature:1733664-1733758:1:exon
so has part: feature:1746844-1747072:1:exon
so has part: feature:1747769-1747864:1:exon
so has part: feature:1756875-1757019:1:exon
so has part: feature:1769509-1769653:1:exon
so has part: feature:1780440-1780559:1:exon
so has part: feature:1783570-1783609:1:exon

XP_036025590.1
type: Protein
SIO_000068: ncbiprotein

position:1783609:1
position: 1783609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1692931-1693014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1700345-1700392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1723732-1724340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1733664-1733758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1746844-1747072:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1747769-1747864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1756875-1757019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1769509-1769653:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1780440-1780559:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1783570-1783609:1:exon

LOC118571058
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118571058
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1857909..1863495)
location: region:1857909-1863495:-1
so has part: feature:1857909-1863495:-1:exon
subclass of: SO_0000010

118571058
type: Gene
SIO_000068: ncbigene

position:1857909:-1
position: 1857909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1863495:-1
position: 1863495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1857909-1863495:-1:exon

LOC118571058
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118571058
product: four and a half LIM domains protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_036169946.1
SIO_010081: LOC118571058
subclass of: SO_0000673
so part of: LOC118571058
location: complement(join(1857909..1859817,1863066..1863495))
location: region:1857909-1863495:-1
so has part: feature:1863066-1863495:-1:exon
so has part: feature:1857909-1859817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1863066-1863495:-1:exon

position:1863066:-1
position: 1863066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1857909-1859817:-1:exon

position:1859817:-1
position: 1859817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118571058
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118571058
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 1-like
translation: MSERINCHYCQDSLQGKKYVQKDNKNCCLECFDKHCANTCEQCRKPISADSKEVHYKNRYWHNTCFNCSKCHQPLASETFVTWNDKILCNNCATHVAIPKCNGCQKDIVAGDENVEYKGTIWHKNCFICNNCKQIIGTQSFFPVEQEFYCVACHEAKFAKRCVKCNKPITSGGISYQDQPWHAACFICVSCSKELSGQRFTAVDNQYYCVDCYKNFVAKKCAGCKNPITGFGKGSNVVTHEEHSWHDFCFNCKSCSANLANKRFVFHEQQVYCPECAKKLMT
SIO_010081: LOC118571058
subclass of: SO_0000673
so part of: LOC118571058
location: complement(1858437..1859285)
location: region:1858437-1859285:-1
so has part: feature:1858437-1859285:-1:exon

XP_036025839.1
type: Protein
SIO_000068: ncbiprotein

position:1858437:-1
position: 1858437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1859285:-1
position: 1859285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1858437-1859285:-1:exon

Tmem263
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Tmem263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1863583..1877369
location: region:1863583-1877369:1
so has part: feature:1863583-1877369:1:exon
subclass of: SO_0000010

118570941
type: Gene
SIO_000068: ncbigene

position:1863583:1
position: 1863583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1877369:1
position: 1877369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1863583-1877369:1:exon

Tmem263
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Tmem263
product: transmembrane protein 263
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169691.1
SIO_010081: Tmem263
subclass of: SO_0000673
so part of: Tmem263
location: join(1863583..1863848,1871987..1872053,1876081..1877369)
location: region:1863583-1877369:1
so has part: feature:1863583-1863848:1:exon
so has part: feature:1871987-1872053:1:exon
so has part: feature:1876081-1877369:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1863583-1863848:1:exon

position:1863848:1
position: 1863848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1871987-1872053:1:exon

position:1871987:1
position: 1871987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1872053:1
position: 1872053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1876081-1877369:1:exon

position:1876081:1
position: 1876081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tmem263
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Tmem263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 263
translation: MNQADKNQEIPSYLSDEPPEGSMKDHPQQQPGMLSRVTGGIFSVTKGAVGATIGGVAWIGGKSLEVTKTAVTTVPSMGIGLVKGGVSAVAGGVTAVGSAVVNKVPLSGKKKDKSD
SIO_010081: Tmem263
subclass of: SO_0000673
so part of: Tmem263
location: join(1871993..1872053,1876081..1876367)
location: region:1871993-1876367:1
so has part: feature:1871993-1872053:1:exon
so has part: feature:1876081-1876367:1:exon

XP_036025584.1
type: Protein
SIO_000068: ncbiprotein

position:1871993:1
position: 1871993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1876367:1
position: 1876367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1871993-1872053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1876081-1876367:1:exon

Mterf2
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Mterf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1880987..1889792)
location: region:1880987-1889792:-1
so has part: feature:1880987-1889792:-1:exon
subclass of: SO_0000010

118570942
type: Gene
SIO_000068: ncbigene

position:1880987:-1
position: 1880987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1889792:-1
position: 1889792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1880987-1889792:-1:exon

Mterf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Mterf2
product: mitochondrial transcription termination factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_036169692.1
SIO_010081: Mterf2
subclass of: SO_0000673
so part of: Mterf2
location: complement(join(1880987..1882376,1888114..1888222,1889697..1889792))
location: region:1880987-1889792:-1
so has part: feature:1889697-1889792:-1:exon
so has part: feature:1888114-1888222:-1:exon
so has part: feature:1880987-1882376:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1889697-1889792:-1:exon

position:1889697:-1
position: 1889697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1888114-1888222:-1:exon

position:1888114:-1
position: 1888114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1888222:-1
position: 1888222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1880987-1882376:-1:exon

position:1882376:-1
position: 1882376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mterf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Mterf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription termination factor 2, mitochondrial
translation: MSWRLLTGHQLCRLCLFRKPQPALQIKPSACVSYETDSQSNKENTRTVERLQACSVDIRKIRRLKAWVLLEDDTYVEEIANILKELGANKTMIASILERCPEAIVCSPAAVNAKRKLWQTVCKNEAHLIQLIEQFPEPFFTVKDQENQKLNVQFFQELGLKNVVISRFLTTASSIFHNPVENNKQMIGVLQDSYLSLGGSQANAKVWLLKLLSQNPFAVLSSPTAVDQILKCLQGQGFSNSQVLQLLSKLKGFLFQLQPGSIQNSISFTKTTFECTDDELRQLVVNCPVLLYYPAPVLEERIQVLLKEGISMAQIRESPMVLELTPQIVQYRIRKLNSLGYRIKDGHLASLNGTKKEFEANLSKMQAKQGRPLFNPVASLSVEE
SIO_010081: Mterf2
subclass of: SO_0000673
so part of: Mterf2
location: complement(1881169..1882323)
location: region:1881169-1882323:-1
so has part: feature:1881169-1882323:-1:exon

XP_036025585.1
type: Protein
SIO_000068: ncbiprotein

position:1881169:-1
position: 1881169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1882323:-1
position: 1882323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1881169-1882323:-1:exon

Cry1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Cry1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1895813..1953749)
location: region:1895813-1953749:-1
so has part: feature:1895813-1953749:-1:exon
subclass of: SO_0000010

118571106
type: Gene
SIO_000068: ncbigene

position:1895813:-1
position: 1895813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1953749:-1
position: 1953749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1895813-1953749:-1:exon

Cry1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Cry1
product: cryptochrome circadian regulator 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036170017.1
SIO_010081: Cry1
subclass of: SO_0000673
so part of: Cry1
location: complement(join(1895813..1896412,1897151..1897258,1897332..1897403,1905974..1906069,1906174..1906376,1906657..1906808,1909292..1909603,1909686..1909826,1911001..1911089,1911909..1912093,1915142..1915284,1921487..1921595,1952717..1953749))
location: region:1895813-1953749:-1
so has part: feature:1952717-1953749:-1:exon
so has part: feature:1921487-1921595:-1:exon
so has part: feature:1915142-1915284:-1:exon
so has part: feature:1911909-1912093:-1:exon
so has part: feature:1911001-1911089:-1:exon
so has part: feature:1909686-1909826:-1:exon
so has part: feature:1909292-1909603:-1:exon
so has part: feature:1906657-1906808:-1:exon
so has part: feature:1906174-1906376:-1:exon
so has part: feature:1905974-1906069:-1:exon
so has part: feature:1897332-1897403:-1:exon
so has part: feature:1897151-1897258:-1:exon
so has part: feature:1895813-1896412:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1952717-1953749:-1:exon

position:1952717:-1
position: 1952717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1921487-1921595:-1:exon

position:1921487:-1
position: 1921487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1921595:-1
position: 1921595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1915142-1915284:-1:exon

position:1915142:-1
position: 1915142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1915284:-1
position: 1915284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1911909-1912093:-1:exon

position:1911909:-1
position: 1911909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1912093:-1
position: 1912093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1911001-1911089:-1:exon

position:1911001:-1
position: 1911001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1911089:-1
position: 1911089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1909686-1909826:-1:exon

position:1909686:-1
position: 1909686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1909826:-1
position: 1909826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1909292-1909603:-1:exon

position:1909292:-1
position: 1909292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1909603:-1
position: 1909603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1906657-1906808:-1:exon

position:1906657:-1
position: 1906657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906808:-1
position: 1906808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1906174-1906376:-1:exon

position:1906174:-1
position: 1906174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906376:-1
position: 1906376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1905974-1906069:-1:exon

position:1905974:-1
position: 1905974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906069:-1
position: 1906069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1897332-1897403:-1:exon

position:1897332:-1
position: 1897332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1897403:-1
position: 1897403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1897151-1897258:-1:exon

position:1897151:-1
position: 1897151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1897258:-1
position: 1897258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1895813-1896412:-1:exon

position:1896412:-1
position: 1896412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cry1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Cry1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cryptochrome-1
translation: MGVNAVHWFRKGLRLHDNPALKECIQGADTVRCVYILDPWFAGSSNVGINRWRFLLQCLEDLDSNLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKMEPLEMPAETITAEVIGKCVTPLSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQLSRYRGLGLLASVPSNPNGNGGLMGYAPGENVPSCSTGGSCPQGSGILHYAHGDSQQTHLQKQGRSSMGTGLGNGKRPSQEEDTQSVGPKVQRQSSN
SIO_010081: Cry1
subclass of: SO_0000673
so part of: Cry1
location: complement(join(1897155..1897258,1897332..1897403,1905974..1906069,1906174..1906376,1906657..1906808,1909292..1909603,1909686..1909826,1911001..1911089,1911909..1912093,1915142..1915284,1921487..1921595,1952717..1952874))
location: region:1897155-1952874:-1
so has part: feature:1952717-1952874:-1:exon
so has part: feature:1921487-1921595:-1:exon
so has part: feature:1915142-1915284:-1:exon
so has part: feature:1911909-1912093:-1:exon
so has part: feature:1911001-1911089:-1:exon
so has part: feature:1909686-1909826:-1:exon
so has part: feature:1909292-1909603:-1:exon
so has part: feature:1906657-1906808:-1:exon
so has part: feature:1906174-1906376:-1:exon
so has part: feature:1905974-1906069:-1:exon
so has part: feature:1897332-1897403:-1:exon
so has part: feature:1897155-1897258:-1:exon

XP_036025910.1
type: Protein
SIO_000068: ncbiprotein

position:1897155:-1
position: 1897155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1952874:-1
position: 1952874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1952717-1952874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1921487-1921595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1915142-1915284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1911909-1912093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1911001-1911089:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1909686-1909826:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1909292-1909603:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1906657-1906808:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1906174-1906376:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1905974-1906069:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1897332-1897403:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1897155-1897258:-1:exon

Btbd11
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Btbd11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2175176..2444229
location: region:2175176-2444229:1
so has part: feature:2175176-2444229:1:exon
subclass of: SO_0000010

118570937
type: Gene
SIO_000068: ncbigene

position:2175176:1
position: 2175176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2444229:1
position: 2444229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2175176-2444229:1:exon

Btbd11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Btbd11
product: BTB domain containing 11, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_036169685.1
SIO_010081: Btbd11
subclass of: SO_0000673
so part of: Btbd11
location: join(2175176..2176870,2330259..2330408,2347879..2348083,2383269..2383421,2410238..2410403,2412467..2412556,2414458..2414559,2416412..2416505,2418997..2419175,2425499..2425604,2430426..2430528,2431272..2431353,2435400..2435468,2438805..2438918,2442049..2444229)
location: region:2175176-2444229:1
so has part: feature:2175176-2176870:1:exon
so has part: feature:2330259-2330408:1:exon
so has part: feature:2347879-2348083:1:exon
so has part: feature:2383269-2383421:1:exon
so has part: feature:2410238-2410403:1:exon
so has part: feature:2412467-2412556:1:exon
so has part: feature:2414458-2414559:1:exon
so has part: feature:2416412-2416505:1:exon
so has part: feature:2418997-2419175:1:exon
so has part: feature:2425499-2425604:1:exon
so has part: feature:2430426-2430528:1:exon
so has part: feature:2431272-2431353:1:exon
so has part: feature:2435400-2435468:1:exon
so has part: feature:2438805-2438918:1:exon
so has part: feature:2442049-2444229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2175176-2176870:1:exon

position:2176870:1
position: 2176870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2330259-2330408:1:exon

position:2330259:1
position: 2330259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2330408:1
position: 2330408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2347879-2348083:1:exon

position:2347879:1
position: 2347879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2348083:1
position: 2348083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2383269-2383421:1:exon

position:2383269:1
position: 2383269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2383421:1
position: 2383421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2410238-2410403:1:exon

position:2410238:1
position: 2410238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2410403:1
position: 2410403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2412467-2412556:1:exon

position:2412467:1
position: 2412467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2412556:1
position: 2412556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2414458-2414559:1:exon

position:2414458:1
position: 2414458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2414559:1
position: 2414559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2416412-2416505:1:exon

position:2416412:1
position: 2416412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2416505:1
position: 2416505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2418997-2419175:1:exon

position:2418997:1
position: 2418997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2419175:1
position: 2419175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2425499-2425604:1:exon

position:2425499:1
position: 2425499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2425604:1
position: 2425604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2430426-2430528:1:exon

position:2430426:1
position: 2430426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2430528:1
position: 2430528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2431272-2431353:1:exon

position:2431272:1
position: 2431272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2431353:1
position: 2431353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2435400-2435468:1:exon

position:2435400:1
position: 2435400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2435468:1
position: 2435468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2438805-2438918:1:exon

position:2438805:1
position: 2438805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438918:1
position: 2438918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2442049-2444229:1:exon

position:2442049:1
position: 2442049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Btbd11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Btbd11
product: BTB domain containing 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_036169684.1
SIO_010081: Btbd11
subclass of: SO_0000673
so part of: Btbd11
location: join(2175176..2176870,2330259..2330408,2347879..2348083,2383269..2383421,2410238..2410403,2416412..2416505,2416616..2416751,2417431..2417651,2418997..2419175,2425499..2425604,2430426..2430528,2431272..2431353,2435400..2435468,2438805..2438918,2442049..2444229)
location: region:2175176-2444229:1
so has part: feature:2175176-2176870:1:exon
so has part: feature:2330259-2330408:1:exon
so has part: feature:2347879-2348083:1:exon
so has part: feature:2383269-2383421:1:exon
so has part: feature:2410238-2410403:1:exon
so has part: feature:2416412-2416505:1:exon
so has part: feature:2416616-2416751:1:exon
so has part: feature:2417431-2417651:1:exon
so has part: feature:2418997-2419175:1:exon
so has part: feature:2425499-2425604:1:exon
so has part: feature:2430426-2430528:1:exon
so has part: feature:2431272-2431353:1:exon
so has part: feature:2435400-2435468:1:exon
so has part: feature:2438805-2438918:1:exon
so has part: feature:2442049-2444229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2175176-2176870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2330259-2330408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2347879-2348083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2383269-2383421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2410238-2410403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2416412-2416505:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2416616-2416751:1:exon

position:2416616:1
position: 2416616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2416751:1
position: 2416751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2417431-2417651:1:exon

position:2417431:1
position: 2417431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2417651:1
position: 2417651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2418997-2419175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2425499-2425604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2430426-2430528:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2431272-2431353:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2435400-2435468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2438805-2438918:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2442049-2444229:1:exon

Btbd11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Btbd11
product: BTB domain containing 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169682.1
SIO_010081: Btbd11
subclass of: SO_0000673
so part of: Btbd11
location: join(2175177..2176870,2330259..2330408,2347879..2348083,2383269..2383421,2410238..2410403,2412467..2412556,2414458..2414559,2416412..2416505,2416616..2416751,2417431..2417651,2418997..2419175,2425499..2425604,2430426..2430528,2431272..2431353,2435400..2435468,2438805..2438918,2442049..2444229)
location: region:2175177-2444229:1
so has part: feature:2175177-2176870:1:exon
so has part: feature:2330259-2330408:1:exon
so has part: feature:2347879-2348083:1:exon
so has part: feature:2383269-2383421:1:exon
so has part: feature:2410238-2410403:1:exon
so has part: feature:2412467-2412556:1:exon
so has part: feature:2414458-2414559:1:exon
so has part: feature:2416412-2416505:1:exon
so has part: feature:2416616-2416751:1:exon
so has part: feature:2417431-2417651:1:exon
so has part: feature:2418997-2419175:1:exon
so has part: feature:2425499-2425604:1:exon
so has part: feature:2430426-2430528:1:exon
so has part: feature:2431272-2431353:1:exon
so has part: feature:2435400-2435468:1:exon
so has part: feature:2438805-2438918:1:exon
so has part: feature:2442049-2444229:1:exon

position:2175177:1
position: 2175177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2175177-2176870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2330259-2330408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2347879-2348083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2383269-2383421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2410238-2410403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2412467-2412556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2414458-2414559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2416412-2416505:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2416616-2416751:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2417431-2417651:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2418997-2419175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2425499-2425604:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2430426-2430528:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2431272-2431353:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2435400-2435468:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2438805-2438918:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2442049-2444229:1:exon

Btbd11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Btbd11
product: BTB domain containing 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_036169683.1
SIO_010081: Btbd11
subclass of: SO_0000673
so part of: Btbd11
location: join(2175177..2176870,2330259..2330408,2347879..2348083,2383269..2383421,2410238..2410403,2412467..2412556,2416412..2416505,2416616..2416751,2417431..2417651,2418997..2419175,2425499..2425604,2430426..2430528,2431272..2431353,2435400..2435468,2438805..2438918,2442049..2444229)
location: region:2175177-2444229:1
so has part: feature:2175177-2176870:1:exon
so has part: feature:2330259-2330408:1:exon
so has part: feature:2347879-2348083:1:exon
so has part: feature:2383269-2383421:1:exon
so has part: feature:2410238-2410403:1:exon
so has part: feature:2412467-2412556:1:exon
so has part: feature:2416412-2416505:1:exon
so has part: feature:2416616-2416751:1:exon
so has part: feature:2417431-2417651:1:exon
so has part: feature:2418997-2419175:1:exon
so has part: feature:2425499-2425604:1:exon
so has part: feature:2430426-2430528:1:exon
so has part: feature:2431272-2431353:1:exon
so has part: feature:2435400-2435468:1:exon
so has part: feature:2438805-2438918:1:exon
so has part: feature:2442049-2444229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2175177-2176870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2330259-2330408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2347879-2348083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2383269-2383421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2410238-2410403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2412467-2412556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2416412-2416505:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2416616-2416751:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2417431-2417651:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2418997-2419175:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2425499-2425604:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2430426-2430528:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2431272-2431353:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2435400-2435468:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2438805-2438918:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2442049-2444229:1:exon

Btbd11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Btbd11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X1
translation: MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMHSRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELELLLLRSRDPRAGPAAPGSLPKDALAKLSMLVSRALVRIAKEAQRLSLRFAKCTKYEIQSAMEIVLSWGLAAHCTAAALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTACMESLFRDIYTRVLASGLPRSCSGPCPGSSSGSGPGPGSGPGAAPAADKERETPGGGAASGGPCSAASSASGGSSCCAPPATAATAVPPATATAAAAAAANHHHHHHTLHEAPRFTVETLEHTVNNDSEIWGLLQPYQHLICGKNASGVLSLPESLNLHRDPQRPSKPGELPMFSQSELRTIEQSLLATRVGSIAELSDLVSRAMHHLQPLNVKHHGNGTPLHHKQGALYWEPEALYTLCYFMHCPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLKADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEVVSTPHKYPSVHPETRHWTALTFAVLHGHIPVVQLLLDAGAKVEGSVEHCEENYSETPLQLAAAVGNFELVSLLLERGADPLIGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLAETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQQHRRPLVQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDSTCIEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSVNTENCVDIYSHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGSGQDVLQDLQRTLAIRIQSIHLSSSKGSVV
SIO_010081: Btbd11
subclass of: SO_0000673
so part of: Btbd11
location: join(2175712..2176870,2330259..2330408,2347879..2348083,2383269..2383421,2410238..2410403,2412467..2412556,2414458..2414559,2416412..2416505,2416616..2416751,2417431..2417651,2418997..2419175,2425499..2425604,2430426..2430528,2431272..2431353,2435400..2435468,2438805..2438918,2442049..2442258)
location: region:2175712-2442258:1
so has part: feature:2175712-2176870:1:exon
so has part: feature:2330259-2330408:1:exon
so has part: feature:2347879-2348083:1:exon
so has part: feature:2383269-2383421:1:exon
so has part: feature:2410238-2410403:1:exon
so has part: feature:2412467-2412556:1:exon
so has part: feature:2414458-2414559:1:exon
so has part: feature:2416412-2416505:1:exon
so has part: feature:2416616-2416751:1:exon
so has part: feature:2417431-2417651:1:exon
so has part: feature:2418997-2419175:1:exon
so has part: feature:2425499-2425604:1:exon
so has part: feature:2430426-2430528:1:exon
so has part: feature:2431272-2431353:1:exon
so has part: feature:2435400-2435468:1:exon
so has part: feature:2438805-2438918:1:exon
so has part: feature:2442049-2442258:1:exon

XP_036025575.1
type: Protein
SIO_000068: ncbiprotein

position:2175712:1
position: 2175712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2442258:1
position: 2442258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2175712-2176870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2330259-2330408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2347879-2348083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2383269-2383421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2410238-2410403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2412467-2412556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2414458-2414559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2416412-2416505:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2416616-2416751:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2417431-2417651:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2418997-2419175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2425499-2425604:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2430426-2430528:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2431272-2431353:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2435400-2435468:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2438805-2438918:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2442049-2442258:1:exon

Btbd11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Btbd11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X4
translation: MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMHSRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELELLLLRSRDPRAGPAAPGSLPKDALAKLSMLVSRALVRIAKEAQRLSLRFAKCTKYEIQSAMEIVLSWGLAAHCTAAALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTACMESLFRDIYTRVLASGLPRSCSGPCPGSSSGSGPGPGSGPGAAPAADKERETPGGGAASGGPCSAASSASGGSSCCAPPATAATAVPPATATAAAAAAANHHHHHHTLHEAPRFTVETLEHTVNNDSEIWGLLQPYQHLICGKNASGVLSLPESLNLHRDPQRPSKPGELPMFSQSELRTIEQSLLATRVGSIAELSDLVSRAMHHLQPLNVKHHGNGTPLHHKQGALYWEPEALYTLCYFMHCPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLKADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEVVSTPHKYPSVHPETRHWTALTFAVLHGHIPVVQLLLDAGAKVEGSVEHCEENYSETPLQLAAAVGVPWTLHTWLESLRIAFQQHRRPLVQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDSTCIEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSVNTENCVDIYSHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGSGQDVLQDLQRTLAIRIQSIHLSSSKGSVV
SIO_010081: Btbd11
subclass of: SO_0000673
so part of: Btbd11
location: join(2175712..2176870,2330259..2330408,2347879..2348083,2383269..2383421,2410238..2410403,2412467..2412556,2414458..2414559,2416412..2416505,2418997..2419175,2425499..2425604,2430426..2430528,2431272..2431353,2435400..2435468,2438805..2438918,2442049..2442258)
location: region:2175712-2442258:1
so has part: feature:2175712-2176870:1:exon
so has part: feature:2330259-2330408:1:exon
so has part: feature:2347879-2348083:1:exon
so has part: feature:2383269-2383421:1:exon
so has part: feature:2410238-2410403:1:exon
so has part: feature:2412467-2412556:1:exon
so has part: feature:2414458-2414559:1:exon
so has part: feature:2416412-2416505:1:exon
so has part: feature:2418997-2419175:1:exon
so has part: feature:2425499-2425604:1:exon
so has part: feature:2430426-2430528:1:exon
so has part: feature:2431272-2431353:1:exon
so has part: feature:2435400-2435468:1:exon
so has part: feature:2438805-2438918:1:exon
so has part: feature:2442049-2442258:1:exon

XP_036025578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2175712-2176870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2330259-2330408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2347879-2348083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2383269-2383421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2410238-2410403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2412467-2412556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2414458-2414559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2416412-2416505:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2418997-2419175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2425499-2425604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2430426-2430528:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2431272-2431353:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2435400-2435468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2438805-2438918:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2442049-2442258:1:exon

Btbd11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Btbd11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X2
translation: MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMHSRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELELLLLRSRDPRAGPAAPGSLPKDALAKLSMLVSRALVRIAKEAQRLSLRFAKCTKYEIQSAMEIVLSWGLAAHCTAAALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTACMESLFRDIYTRVLASGLPRSCSGPCPGSSSGSGPGPGSGPGAAPAADKERETPGGGAASGGPCSAASSASGGSSCCAPPATAATAVPPATATAAAAAAANHHHHHHTLHEAPRFTVETLEHTVNNDSEIWGLLQPYQHLICGKNASGVLSLPESLNLHRDPQRPSKPGELPMFSQSELRTIEQSLLATRVGSIAELSDLVSRAMHHLQPLNVKHHGNGTPLHHKQGALYWEPEALYTLCYFMHCPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLKADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVELLLDAGAKVEGSVEHCEENYSETPLQLAAAVGNFELVSLLLERGADPLIGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLAETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQQHRRPLVQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDSTCIEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSVNTENCVDIYSHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGSGQDVLQDLQRTLAIRIQSIHLSSSKGSVV
SIO_010081: Btbd11
subclass of: SO_0000673
so part of: Btbd11
location: join(2175712..2176870,2330259..2330408,2347879..2348083,2383269..2383421,2410238..2410403,2412467..2412556,2416412..2416505,2416616..2416751,2417431..2417651,2418997..2419175,2425499..2425604,2430426..2430528,2431272..2431353,2435400..2435468,2438805..2438918,2442049..2442258)
location: region:2175712-2442258:1
so has part: feature:2175712-2176870:1:exon
so has part: feature:2330259-2330408:1:exon
so has part: feature:2347879-2348083:1:exon
so has part: feature:2383269-2383421:1:exon
so has part: feature:2410238-2410403:1:exon
so has part: feature:2412467-2412556:1:exon
so has part: feature:2416412-2416505:1:exon
so has part: feature:2416616-2416751:1:exon
so has part: feature:2417431-2417651:1:exon
so has part: feature:2418997-2419175:1:exon
so has part: feature:2425499-2425604:1:exon
so has part: feature:2430426-2430528:1:exon
so has part: feature:2431272-2431353:1:exon
so has part: feature:2435400-2435468:1:exon
so has part: feature:2438805-2438918:1:exon
so has part: feature:2442049-2442258:1:exon

XP_036025576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2175712-2176870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2330259-2330408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2347879-2348083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2383269-2383421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2410238-2410403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2412467-2412556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2416412-2416505:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2416616-2416751:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2417431-2417651:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2418997-2419175:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2425499-2425604:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2430426-2430528:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2431272-2431353:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2435400-2435468:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2438805-2438918:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2442049-2442258:1:exon

Btbd11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Btbd11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X3
translation: MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMHSRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELELLLLRSRDPRAGPAAPGSLPKDALAKLSMLVSRALVRIAKEAQRLSLRFAKCTKYEIQSAMEIVLSWGLAAHCTAAALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTACMESLFRDIYTRVLASGLPRSCSGPCPGSSSGSGPGPGSGPGAAPAADKERETPGGGAASGGPCSAASSASGGSSCCAPPATAATAVPPATATAAAAAAANHHHHHHTLHEAPRFTVETLEHTVNNDSEIWGLLQPYQHLICGKNASGVLSLPESLNLHRDPQRPSKPGELPMFSQSELRTIEQSLLATRVGSIAELSDLVSRAMHHLQPLNVKHHGNGTPLHHKQGALYWEPEALYTLCYFMHCPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLKADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQLLLDAGAKVEGSVEHCEENYSETPLQLAAAVGNFELVSLLLERGADPLIGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLAETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQQHRRPLVQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDSTCIEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSVNTENCVDIYSHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGSGQDVLQDLQRTLAIRIQSIHLSSSKGSVV
SIO_010081: Btbd11
subclass of: SO_0000673
so part of: Btbd11
location: join(2175712..2176870,2330259..2330408,2347879..2348083,2383269..2383421,2410238..2410403,2416412..2416505,2416616..2416751,2417431..2417651,2418997..2419175,2425499..2425604,2430426..2430528,2431272..2431353,2435400..2435468,2438805..2438918,2442049..2442258)
location: region:2175712-2442258:1
so has part: feature:2175712-2176870:1:exon
so has part: feature:2330259-2330408:1:exon
so has part: feature:2347879-2348083:1:exon
so has part: feature:2383269-2383421:1:exon
so has part: feature:2410238-2410403:1:exon
so has part: feature:2416412-2416505:1:exon
so has part: feature:2416616-2416751:1:exon
so has part: feature:2417431-2417651:1:exon
so has part: feature:2418997-2419175:1:exon
so has part: feature:2425499-2425604:1:exon
so has part: feature:2430426-2430528:1:exon
so has part: feature:2431272-2431353:1:exon
so has part: feature:2435400-2435468:1:exon
so has part: feature:2438805-2438918:1:exon
so has part: feature:2442049-2442258:1:exon

XP_036025577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2175712-2176870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2330259-2330408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2347879-2348083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2383269-2383421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2410238-2410403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2416412-2416505:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2416616-2416751:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2417431-2417651:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2418997-2419175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2425499-2425604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2430426-2430528:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2431272-2431353:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2435400-2435468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2438805-2438918:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2442049-2442258:1:exon

LOC118570938
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2324609..2325841)
location: region:2324609-2325841:-1
so has part: feature:2324609-2325841:-1:exon
subclass of: SO_0000010

118570938
type: Gene
SIO_000068: ncbigene

position:2324609:-1
position: 2324609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2325841:-1
position: 2325841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2324609-2325841:-1:exon

LOC118570938
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118570938
product: zinc finger protein 431-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036169687.1
SIO_010081: LOC118570938
subclass of: SO_0000673
so part of: LOC118570938
location: complement(2324609..2325841)
location: region:2324609-2325841:-1
so has part: feature:2324609-2325841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2324609-2325841:-1:exon

LOC118570938
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118570938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 431-like
translation: MNAVTYNDLHVNITQEEWALMDPSQKNLYKDVMLETYMNLITIGYNWEDLKVEEYCQSSQKYGSHKRSHTTEKSHEYTECGKAFECHSHPQRHEQTHTGEKSYEYNQCGKTFAQQSHLHRHETTHIFKKTYGCNQSGKAITHWKILQLDRRTHSGEKPYECNQCGKAFTKPSHLQVHKRTHTGEKPYECNQCGKAFAHHNALRLHERTHTGEKPYECNQCGKVFAHPSHLQVHKRTHTGEKPYECNQCGKVFAQNSTLQMHERTHTGEKPYECNHCGKAFAQHSALRLHERTHTGEKPYECKQCGKTFAQSNHLQVHKRTHTGEKPYECNQCGKVFAHPSSLQVHKRTHTGEKPYECKQCGKTFAQPNHLQVHKRTHTGEKPYECIHCGKAFAQHSALRLHERAHTGQKP
SIO_010081: LOC118570938
subclass of: SO_0000673
so part of: LOC118570938
location: complement(2324609..2325841)
location: region:2324609-2325841:-1
so has part: feature:2324609-2325841:-1:exon

XP_036025580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2324609-2325841:-1:exon

Btbd11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Btbd11
product: BTB domain containing 11, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_036169686.1
SIO_010081: Btbd11
subclass of: SO_0000673
so part of: Btbd11
location: join(2383011..2383123,2383269..2383421,2410238..2410403,2412467..2412556,2414458..2414559,2416412..2416505,2416616..2416751,2417431..2417651,2418997..2419175,2425499..2425604,2430426..2430528,2431272..2431353,2435400..2435468,2438805..2438918,2442049..2444229)
location: region:2383011-2444229:1
so has part: feature:2383011-2383123:1:exon
so has part: feature:2383269-2383421:1:exon
so has part: feature:2410238-2410403:1:exon
so has part: feature:2412467-2412556:1:exon
so has part: feature:2414458-2414559:1:exon
so has part: feature:2416412-2416505:1:exon
so has part: feature:2416616-2416751:1:exon
so has part: feature:2417431-2417651:1:exon
so has part: feature:2418997-2419175:1:exon
so has part: feature:2425499-2425604:1:exon
so has part: feature:2430426-2430528:1:exon
so has part: feature:2431272-2431353:1:exon
so has part: feature:2435400-2435468:1:exon
so has part: feature:2438805-2438918:1:exon
so has part: feature:2442049-2444229:1:exon

position:2383011:1
position: 2383011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2383011-2383123:1:exon

position:2383123:1
position: 2383123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2383269-2383421:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2410238-2410403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2412467-2412556:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2414458-2414559:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2416412-2416505:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2416616-2416751:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2417431-2417651:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2418997-2419175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2425499-2425604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2430426-2430528:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2431272-2431353:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2435400-2435468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2438805-2438918:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2442049-2444229:1:exon

Btbd11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Btbd11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X5
translation: MRKPRPGESRESAPGSPVGSGCLQRLSHSGISRPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLKADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEVVSTPHKYPSVHPETRHWTALTFAVLHGHIPVVQLLLDAGAKVEGSVEHCEENYSETPLQLAAAVGNFELVSLLLERGADPLIGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLAETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQQHRRPLVQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDSTCIEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSVNTENCVDIYSHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGSGQDVLQDLQRTLAIRIQSIHLSSSKGSVV
SIO_010081: Btbd11
subclass of: SO_0000673
so part of: Btbd11
location: join(2383026..2383123,2383269..2383421,2410238..2410403,2412467..2412556,2414458..2414559,2416412..2416505,2416616..2416751,2417431..2417651,2418997..2419175,2425499..2425604,2430426..2430528,2431272..2431353,2435400..2435468,2438805..2438918,2442049..2442258)
location: region:2383026-2442258:1
so has part: feature:2383026-2383123:1:exon
so has part: feature:2383269-2383421:1:exon
so has part: feature:2410238-2410403:1:exon
so has part: feature:2412467-2412556:1:exon
so has part: feature:2414458-2414559:1:exon
so has part: feature:2416412-2416505:1:exon
so has part: feature:2416616-2416751:1:exon
so has part: feature:2417431-2417651:1:exon
so has part: feature:2418997-2419175:1:exon
so has part: feature:2425499-2425604:1:exon
so has part: feature:2430426-2430528:1:exon
so has part: feature:2431272-2431353:1:exon
so has part: feature:2435400-2435468:1:exon
so has part: feature:2438805-2438918:1:exon
so has part: feature:2442049-2442258:1:exon

XP_036025579.1
type: Protein
SIO_000068: ncbiprotein

position:2383026:1
position: 2383026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2383026-2383123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2383269-2383421:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2410238-2410403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2412467-2412556:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2414458-2414559:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2416412-2416505:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2416616-2416751:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2417431-2417651:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2418997-2419175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2425499-2425604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2430426-2430528:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2431272-2431353:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2435400-2435468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2438805-2438918:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2442049-2442258:1:exon

Pwp1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Pwp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2470399..2489706
location: region:2470399-2489706:1
so has part: feature:2470399-2489706:1:exon
subclass of: SO_0000010

118571147
type: Gene
SIO_000068: ncbigene

position:2470399:1
position: 2470399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2489706:1
position: 2489706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2470399-2489706:1:exon

Pwp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Pwp1
product: PWP1 homolog, endonuclein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036170063.1
SIO_010081: Pwp1
subclass of: SO_0000673
so part of: Pwp1
location: join(2470399..2470581,2472703..2472761,2472866..2473053,2474668..2474753,2474853..2474949,2478382..2478492,2479270..2479400,2479863..2479924,2481841..2481937,2482687..2482748,2484806..2484917,2487764..2487854,2487948..2488069,2488616..2488721,2489385..2489706)
location: region:2470399-2489706:1
so has part: feature:2470399-2470581:1:exon
so has part: feature:2472703-2472761:1:exon
so has part: feature:2472866-2473053:1:exon
so has part: feature:2474668-2474753:1:exon
so has part: feature:2474853-2474949:1:exon
so has part: feature:2478382-2478492:1:exon
so has part: feature:2479270-2479400:1:exon
so has part: feature:2479863-2479924:1:exon
so has part: feature:2481841-2481937:1:exon
so has part: feature:2482687-2482748:1:exon
so has part: feature:2484806-2484917:1:exon
so has part: feature:2487764-2487854:1:exon
so has part: feature:2487948-2488069:1:exon
so has part: feature:2488616-2488721:1:exon
so has part: feature:2489385-2489706:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2470399-2470581:1:exon

position:2470581:1
position: 2470581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2472703-2472761:1:exon

position:2472703:1
position: 2472703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2472761:1
position: 2472761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2472866-2473053:1:exon

position:2472866:1
position: 2472866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2473053:1
position: 2473053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2474668-2474753:1:exon

position:2474668:1
position: 2474668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2474753:1
position: 2474753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2474853-2474949:1:exon

position:2474853:1
position: 2474853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2474949:1
position: 2474949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2478382-2478492:1:exon

position:2478382:1
position: 2478382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2478492:1
position: 2478492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2479270-2479400:1:exon

position:2479270:1
position: 2479270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2479400:1
position: 2479400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2479863-2479924:1:exon

position:2479863:1
position: 2479863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2479924:1
position: 2479924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2481841-2481937:1:exon

position:2481841:1
position: 2481841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2481937:1
position: 2481937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2482687-2482748:1:exon

position:2482687:1
position: 2482687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2482748:1
position: 2482748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2484806-2484917:1:exon

position:2484806:1
position: 2484806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2484917:1
position: 2484917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2487764-2487854:1:exon

position:2487764:1
position: 2487764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2487854:1
position: 2487854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2487948-2488069:1:exon

position:2487948:1
position: 2487948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2488069:1
position: 2488069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2488616-2488721:1:exon

position:2488616:1
position: 2488616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2488721:1
position: 2488721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2489385-2489706:1:exon

position:2489385:1
position: 2489385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pwp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Pwp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: periodic tryptophan protein 1 homolog
translation: MNRSRQVTCVAWVRRGVAKETPDKVELSKEEVKRLIAEAKEKLQEEGGSEEEESGSPSGDGIRSARTHQARPREPLEDGDPQDNRTLDDDELAEYDLDNYDEEDNPDAETIGESLLGLTVYGSNDQDPYVTLKDTEQYEHEDFLIKPTDNFIICGRAEQEQCSLEVHVYNQEEESFYVHHDILLSAYPLSVEWLNFDPSPDASSGNYIAVGNMTPVIEVWDLDIVDSLEPVFTLGSKLSKKKKKKGKKSSSAEGHTDAVLDLSWNKTIRNVLASASADSTVILWDMSVGKPAARLTAHTDKVQTLQFHPFEAQTLVSGSYDKSVALYDCRNPNQNHRLWRFSGQIERVTWNHFSPCQFLASTDDGFVYNLDARSDKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDILGDKPSLIHSRDMKMGVLFCSSCCPDLPFVYAFGGQKEGLRVWDISTVSSVNEAFGRRERLVIGSSKGLSVSGPCGSGSPQTPMES
SIO_010081: Pwp1
subclass of: SO_0000673
so part of: Pwp1
location: join(2470510..2470581,2472703..2472761,2472866..2473053,2474668..2474753,2474853..2474949,2478382..2478492,2479270..2479400,2479863..2479924,2481841..2481937,2482687..2482748,2484806..2484917,2487764..2487854,2487948..2488069,2488616..2488721,2489385..2489494)
location: region:2470510-2489494:1
so has part: feature:2470510-2470581:1:exon
so has part: feature:2472703-2472761:1:exon
so has part: feature:2472866-2473053:1:exon
so has part: feature:2474668-2474753:1:exon
so has part: feature:2474853-2474949:1:exon
so has part: feature:2478382-2478492:1:exon
so has part: feature:2479270-2479400:1:exon
so has part: feature:2479863-2479924:1:exon
so has part: feature:2481841-2481937:1:exon
so has part: feature:2482687-2482748:1:exon
so has part: feature:2484806-2484917:1:exon
so has part: feature:2487764-2487854:1:exon
so has part: feature:2487948-2488069:1:exon
so has part: feature:2488616-2488721:1:exon
so has part: feature:2489385-2489494:1:exon

XP_036025956.1
type: Protein
SIO_000068: ncbiprotein

position:2470510:1
position: 2470510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2489494:1
position: 2489494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2470510-2470581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2472703-2472761:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2472866-2473053:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2474668-2474753:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2474853-2474949:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2478382-2478492:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2479270-2479400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2479863-2479924:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2481841-2481937:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482687-2482748:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2484806-2484917:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2487764-2487854:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2487948-2488069:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2488616-2488721:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2489385-2489494:1:exon

Prdm4
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Prdm4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2493678..2518101)
location: region:2493678-2518101:-1
so has part: feature:2493678-2518101:-1:exon
subclass of: SO_0000010

118571118
type: Gene
SIO_000068: ncbigene

position:2493678:-1
position: 2493678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2518101:-1
position: 2518101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2493678-2518101:-1:exon

Prdm4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Prdm4
product: PR/SET domain 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_036170032.1
SIO_010081: Prdm4
subclass of: SO_0000673
so part of: Prdm4
location: complement(join(2493678..2495164,2498551..2498719,2500584..2500898,2501785..2501912,2503026..2503111,2504431..2504549,2505528..2505677,2507412..2508206,2511364..2511549,2513913..2514046,2517626..2517831,2518057..2518101))
location: region:2493678-2518101:-1
so has part: feature:2518057-2518101:-1:exon
so has part: feature:2517626-2517831:-1:exon
so has part: feature:2513913-2514046:-1:exon
so has part: feature:2511364-2511549:-1:exon
so has part: feature:2507412-2508206:-1:exon
so has part: feature:2505528-2505677:-1:exon
so has part: feature:2504431-2504549:-1:exon
so has part: feature:2503026-2503111:-1:exon
so has part: feature:2501785-2501912:-1:exon
so has part: feature:2500584-2500898:-1:exon
so has part: feature:2498551-2498719:-1:exon
so has part: feature:2493678-2495164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2518057-2518101:-1:exon

position:2518057:-1
position: 2518057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2517626-2517831:-1:exon

position:2517626:-1
position: 2517626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2517831:-1
position: 2517831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2513913-2514046:-1:exon

position:2513913:-1
position: 2513913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2514046:-1
position: 2514046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2511364-2511549:-1:exon

position:2511364:-1
position: 2511364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2511549:-1
position: 2511549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2507412-2508206:-1:exon

position:2507412:-1
position: 2507412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2508206:-1
position: 2508206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2505528-2505677:-1:exon

position:2505528:-1
position: 2505528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2505677:-1
position: 2505677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2504431-2504549:-1:exon

position:2504431:-1
position: 2504431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2504549:-1
position: 2504549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2503026-2503111:-1:exon

position:2503026:-1
position: 2503026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2503111:-1
position: 2503111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2501785-2501912:-1:exon

position:2501785:-1
position: 2501785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2501912:-1
position: 2501912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2500584-2500898:-1:exon

position:2500584:-1
position: 2500584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2500898:-1
position: 2500898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2498551-2498719:-1:exon

position:2498551:-1
position: 2498551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2498719:-1
position: 2498719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2493678-2495164:-1:exon

position:2495164:-1
position: 2495164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Prdm4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Prdm4
product: PR/SET domain 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036170031.1
SIO_010081: Prdm4
subclass of: SO_0000673
so part of: Prdm4
location: complement(join(2493678..2495164,2498551..2498719,2500584..2500898,2501785..2501912,2503026..2503111,2504431..2504549,2505528..2505677,2507412..2508206,2511364..2511549,2513913..2514046,2517626..2517831,2517909..2518079))
location: region:2493678-2518079:-1
so has part: feature:2517909-2518079:-1:exon
so has part: feature:2517626-2517831:-1:exon
so has part: feature:2513913-2514046:-1:exon
so has part: feature:2511364-2511549:-1:exon
so has part: feature:2507412-2508206:-1:exon
so has part: feature:2505528-2505677:-1:exon
so has part: feature:2504431-2504549:-1:exon
so has part: feature:2503026-2503111:-1:exon
so has part: feature:2501785-2501912:-1:exon
so has part: feature:2500584-2500898:-1:exon
so has part: feature:2498551-2498719:-1:exon
so has part: feature:2493678-2495164:-1:exon

position:2518079:-1
position: 2518079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2517909-2518079:-1:exon

position:2517909:-1
position: 2517909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2517626-2517831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2513913-2514046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2511364-2511549:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2507412-2508206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2505528-2505677:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2504431-2504549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2503026-2503111:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2501785-2501912:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2500584-2500898:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2498551-2498719:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2493678-2495164:-1:exon

Prdm4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Prdm4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 4
translation: MNDMNLSPVGMEQLSSSSVSNALPVSGSHLGLAASPSHSAIPAPGLPVAIPNLGPSLSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRPPPQYIHPNSINVDGNTALSITNSPSALDPYQANGNVGLELGVVSIDSRSVNTHGAQSLHPNDGHEVALDTTITMENVSRVTSPISTDGMAEELTMDGVAGEHSQIPNGSRSHEPLSVDSVSNNLTADTVGHGGVIPIHGNGLELPVVMETDHIANRVNGMSDSALSDSIHSVAMSTNSVSVALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVTSDSLAFVPPSLQMEDSNSNKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRPSIVGTEVGVWTAETIPVRTCFGPLIGQQRHSMEVAEWSDKAVNHVWKIYHNSVLEFCIITTDENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPENELLFYYSRDYAQQIGVPEHPDVHLCNCGKECNSYSEFKAHLTSHIHSHLPGQGHSHSHGPSHSKERKWKCSMCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLRTNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAQEEEEEEESEEDDLPDSMRTDDCRMSSAIYSADESLSTHR
SIO_010081: Prdm4
subclass of: SO_0000673
so part of: Prdm4
location: complement(join(2494852..2495164,2498551..2498719,2500584..2500898,2501785..2501912,2503026..2503111,2504431..2504549,2505528..2505677,2507412..2508206,2511364..2511549,2513913..2514045))
location: region:2494852-2514045:-1
so has part: feature:2513913-2514045:-1:exon
so has part: feature:2511364-2511549:-1:exon
so has part: feature:2507412-2508206:-1:exon
so has part: feature:2505528-2505677:-1:exon
so has part: feature:2504431-2504549:-1:exon
so has part: feature:2503026-2503111:-1:exon
so has part: feature:2501785-2501912:-1:exon
so has part: feature:2500584-2500898:-1:exon
so has part: feature:2498551-2498719:-1:exon
so has part: feature:2494852-2495164:-1:exon

XP_036025924.1
type: Protein
SIO_000068: ncbiprotein

position:2494852:-1
position: 2494852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2514045:-1
position: 2514045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2513913-2514045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2511364-2511549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2507412-2508206:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2505528-2505677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2504431-2504549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2503026-2503111:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2501785-2501912:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2500584-2500898:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2498551-2498719:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2494852-2495164:-1:exon

Prdm4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Prdm4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 4
translation: MNDMNLSPVGMEQLSSSSVSNALPVSGSHLGLAASPSHSAIPAPGLPVAIPNLGPSLSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRPPPQYIHPNSINVDGNTALSITNSPSALDPYQANGNVGLELGVVSIDSRSVNTHGAQSLHPNDGHEVALDTTITMENVSRVTSPISTDGMAEELTMDGVAGEHSQIPNGSRSHEPLSVDSVSNNLTADTVGHGGVIPIHGNGLELPVVMETDHIANRVNGMSDSALSDSIHSVAMSTNSVSVALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVTSDSLAFVPPSLQMEDSNSNKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRPSIVGTEVGVWTAETIPVRTCFGPLIGQQRHSMEVAEWSDKAVNHVWKIYHNSVLEFCIITTDENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPENELLFYYSRDYAQQIGVPEHPDVHLCNCGKECNSYSEFKAHLTSHIHSHLPGQGHSHSHGPSHSKERKWKCSMCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLRTNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAQEEEEEEESEEDDLPDSMRTDDCRMSSAIYSADESLSTHR
SIO_010081: Prdm4
subclass of: SO_0000673
so part of: Prdm4
location: complement(join(2494852..2495164,2498551..2498719,2500584..2500898,2501785..2501912,2503026..2503111,2504431..2504549,2505528..2505677,2507412..2508206,2511364..2511549,2513913..2514045))
location: region:2494852-2514045:-1
so has part: feature:2513913-2514045:-1:exon
so has part: feature:2511364-2511549:-1:exon
so has part: feature:2507412-2508206:-1:exon
so has part: feature:2505528-2505677:-1:exon
so has part: feature:2504431-2504549:-1:exon
so has part: feature:2503026-2503111:-1:exon
so has part: feature:2501785-2501912:-1:exon
so has part: feature:2500584-2500898:-1:exon
so has part: feature:2498551-2498719:-1:exon
so has part: feature:2494852-2495164:-1:exon

XP_036025925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2513913-2514045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2511364-2511549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2507412-2508206:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2505528-2505677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2504431-2504549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2503026-2503111:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2501785-2501912:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2500584-2500898:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2498551-2498719:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2494852-2495164:-1:exon

Ascl4
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Ascl4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2527083..2528798
location: region:2527083-2528798:1
so has part: feature:2527083-2528798:1:exon
subclass of: SO_0000010

118571188
type: Gene
SIO_000068: ncbigene

position:2527083:1
position: 2527083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2528798:1
position: 2528798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2527083-2528798:1:exon

Ascl4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ascl4
product: achaete-scute family bHLH transcription factor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036170137.1
SIO_010081: Ascl4
subclass of: SO_0000673
so part of: Ascl4
location: 2527083..2528798
location: region:2527083-2528798:1
so has part: feature:2527083-2528798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2527083-2528798:1:exon

Ascl4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ascl4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: achaete-scute homolog 4
translation: MEKRKPAGLLALRPPLQTPPPLGALAGREPGRTSARQDAEDGERGRPCPPLSLGGVGEPAFLRQRNERERQRVRCVNDGYARLRQHLPRELAGPRPSKVETLRAAISYIRHLQELLERHRRDCNSDGESKASSGASPCSEPEERG
SIO_010081: Ascl4
subclass of: SO_0000673
so part of: Ascl4
location: 2527655..2528092
location: region:2527655-2528092:1
so has part: feature:2527655-2528092:1:exon

XP_036026030.1
type: Protein
SIO_000068: ncbiprotein

position:2527655:1
position: 2527655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2528092:1
position: 2528092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2527655-2528092:1:exon

Rtcb
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Rtcb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2539607..2560505)
location: region:2539607-2560505:-1
so has part: feature:2539607-2560505:-1:exon
subclass of: SO_0000010

118571148
type: Gene
SIO_000068: ncbigene

position:2539607:-1
position: 2539607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2560505:-1
position: 2560505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2539607-2560505:-1:exon

Rtcb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Rtcb
product: RNA 2',3'-cyclic phosphate and 5'-OH ligase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036170064.1
SIO_010081: Rtcb
subclass of: SO_0000673
so part of: Rtcb
location: complement(join(2539607..2540046,2543895..2544014,2545941..2546051,2546660..2546848,2547316..2547491,2548665..2548824,2549709..2549865,2551895..2552051,2555145..2555244,2556113..2556180,2558669..2558747,2560200..2560505))
location: region:2539607-2560505:-1
so has part: feature:2560200-2560505:-1:exon
so has part: feature:2558669-2558747:-1:exon
so has part: feature:2556113-2556180:-1:exon
so has part: feature:2555145-2555244:-1:exon
so has part: feature:2551895-2552051:-1:exon
so has part: feature:2549709-2549865:-1:exon
so has part: feature:2548665-2548824:-1:exon
so has part: feature:2547316-2547491:-1:exon
so has part: feature:2546660-2546848:-1:exon
so has part: feature:2545941-2546051:-1:exon
so has part: feature:2543895-2544014:-1:exon
so has part: feature:2539607-2540046:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2560200-2560505:-1:exon

position:2560200:-1
position: 2560200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2558669-2558747:-1:exon

position:2558669:-1
position: 2558669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2558747:-1
position: 2558747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2556113-2556180:-1:exon

position:2556113:-1
position: 2556113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2556180:-1
position: 2556180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2555145-2555244:-1:exon

position:2555145:-1
position: 2555145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2555244:-1
position: 2555244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2551895-2552051:-1:exon

position:2551895:-1
position: 2551895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2552051:-1
position: 2552051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2549709-2549865:-1:exon

position:2549709:-1
position: 2549709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2549865:-1
position: 2549865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2548665-2548824:-1:exon

position:2548665:-1
position: 2548665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2548824:-1
position: 2548824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2547316-2547491:-1:exon

position:2547316:-1
position: 2547316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2547491:-1
position: 2547491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2546660-2546848:-1:exon

position:2546660:-1
position: 2546660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2546848:-1
position: 2546848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2545941-2546051:-1:exon

position:2545941:-1
position: 2545941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2546051:-1
position: 2546051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2543895-2544014:-1:exon

position:2543895:-1
position: 2543895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2544014:-1
position: 2544014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2539607-2540046:-1:exon

position:2540046:-1
position: 2540046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rtcb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Rtcb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-splicing ligase RtcB homolog
translation: MEDVITRGPRFARRVLSLGACLPPSCGGAGRACALSPQRRPSGASGQGDGSSFPAESRATATFAATMSRNYNDELQFLDKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVGGFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINCGVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSLREGYAWAEDKEHCEEYGRMLQADPNKVSPRAKKRGLPQLGTLGAGNHYAEIQVVDEIFNEYAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIASPEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDLHVIYDVSHNIAKVEQHVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMTETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTDVVNTCHDAGISKKAIKLRPIAVIKG
SIO_010081: Rtcb
subclass of: SO_0000673
so part of: Rtcb
location: complement(join(2539939..2540046,2543895..2544014,2545941..2546051,2546660..2546848,2547316..2547491,2548665..2548824,2549709..2549865,2551895..2552051,2555145..2555244,2556113..2556180,2558669..2558747,2560200..2560490))
location: region:2539939-2560490:-1
so has part: feature:2560200-2560490:-1:exon
so has part: feature:2558669-2558747:-1:exon
so has part: feature:2556113-2556180:-1:exon
so has part: feature:2555145-2555244:-1:exon
so has part: feature:2551895-2552051:-1:exon
so has part: feature:2549709-2549865:-1:exon
so has part: feature:2548665-2548824:-1:exon
so has part: feature:2547316-2547491:-1:exon
so has part: feature:2546660-2546848:-1:exon
so has part: feature:2545941-2546051:-1:exon
so has part: feature:2543895-2544014:-1:exon
so has part: feature:2539939-2540046:-1:exon

XP_036025957.1
type: Protein
SIO_000068: ncbiprotein

position:2539939:-1
position: 2539939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2560490:-1
position: 2560490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2560200-2560490:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2558669-2558747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2556113-2556180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2555145-2555244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2551895-2552051:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2549709-2549865:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2548665-2548824:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2547316-2547491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2546660-2546848:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2545941-2546051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2543895-2544014:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2539939-2540046:-1:exon

LOC118571289
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118571289
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2554475..2554580)
location: region:2554475-2554580:-1
so has part: feature:2554475-2554580:-1:exon
subclass of: SO_0000623

118571289
type: Gene
SIO_000068: ncbigene

position:2554475:-1
position: 2554475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2554580:-1
position: 2554580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2554475-2554580:-1:exon

LOC118571289
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: snRNA
gene: LOC118571289
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004943327.1
SIO_010081: LOC118571289
subclass of: SO_0000673
so part of: LOC118571289
location: complement(2554475..2554580)
location: region:2554475-2554580:-1
so has part: feature:2554475-2554580:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2554475-2554580:-1:exon

LOC118571149
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118571149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2557470..2557651
location: region:2557470-2557651:1
so has part: feature:2557470-2557651:1:exon
subclass of: SO_0000010

118571149
type: Gene
SIO_000068: ncbigene

position:2557470:1
position: 2557470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2557651:1
position: 2557651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2557470-2557651:1:exon

LOC118571149
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118571149
product: ATP synthase subunit ATP5MPL, mitochondrial-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_036170065.1
SIO_010081: LOC118571149
subclass of: SO_0000673
so part of: LOC118571149
location: 2557470..2557651
location: region:2557470-2557651:1
so has part: feature:2557470-2557651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2557470-2557651:1:exon

LOC118571149
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118571149
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:2557571..2557573,aa:OTHER)
product: LOW QUALITY PROTEIN: ATP synthase subunit ATP5MPL, mitochondrial-like
translation: MLQILKNVWVFMKAYYTQVYQENWVGMGXITFILXKLRSANKSKALKNSSSSPSPTHGHH
SIO_010081: LOC118571149
subclass of: SO_0000673
so part of: LOC118571149
location: 2557470..2557651
location: region:2557470-2557651:1
so has part: feature:2557470-2557651:1:exon

XP_036025958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2557470-2557651:1:exon

Bpifc
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Bpifc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2561560..2603202)
location: region:2561560-2603202:-1
so has part: feature:2561560-2603202:-1:exon
subclass of: SO_0000010

118571150
type: Gene
SIO_000068: ncbigene

position:2561560:-1
position: 2561560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2603202:-1
position: 2603202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2561560-2603202:-1:exon

Bpifc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Bpifc
product: BPI fold containing family C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036170066.1
SIO_010081: Bpifc
subclass of: SO_0000673
so part of: Bpifc
location: complement(join(2561560..2562151,2563438..2563514,2564841..2564904,2567920..2567962,2579666..2579733,2580478..2580648,2581984..2582037,2585395..2585571,2587074..2587165,2591022..2591082,2592659..2592722,2592824..2592979,2594765..2594893,2597876..2597996,2603079..2603202))
location: region:2561560-2603202:-1
so has part: feature:2603079-2603202:-1:exon
so has part: feature:2597876-2597996:-1:exon
so has part: feature:2594765-2594893:-1:exon
so has part: feature:2592824-2592979:-1:exon
so has part: feature:2592659-2592722:-1:exon
so has part: feature:2591022-2591082:-1:exon
so has part: feature:2587074-2587165:-1:exon
so has part: feature:2585395-2585571:-1:exon
so has part: feature:2581984-2582037:-1:exon
so has part: feature:2580478-2580648:-1:exon
so has part: feature:2579666-2579733:-1:exon
so has part: feature:2567920-2567962:-1:exon
so has part: feature:2564841-2564904:-1:exon
so has part: feature:2563438-2563514:-1:exon
so has part: feature:2561560-2562151:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2603079-2603202:-1:exon

position:2603079:-1
position: 2603079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2597876-2597996:-1:exon

position:2597876:-1
position: 2597876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2597996:-1
position: 2597996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2594765-2594893:-1:exon

position:2594765:-1
position: 2594765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2594893:-1
position: 2594893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2592824-2592979:-1:exon

position:2592824:-1
position: 2592824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2592979:-1
position: 2592979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2592659-2592722:-1:exon

position:2592659:-1
position: 2592659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2592722:-1
position: 2592722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2591022-2591082:-1:exon

position:2591022:-1
position: 2591022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2591082:-1
position: 2591082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2587074-2587165:-1:exon

position:2587074:-1
position: 2587074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2587165:-1
position: 2587165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2585395-2585571:-1:exon

position:2585395:-1
position: 2585395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2585571:-1
position: 2585571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2581984-2582037:-1:exon

position:2581984:-1
position: 2581984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2582037:-1
position: 2582037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2580478-2580648:-1:exon

position:2580478:-1
position: 2580478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2580648:-1
position: 2580648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2579666-2579733:-1:exon

position:2579666:-1
position: 2579666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2579733:-1
position: 2579733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2567920-2567962:-1:exon

position:2567920:-1
position: 2567920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2567962:-1
position: 2567962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2564841-2564904:-1:exon

position:2564841:-1
position: 2564841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2564904:-1
position: 2564904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2563438-2563514:-1:exon

position:2563438:-1
position: 2563438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2563514:-1
position: 2563514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2561560-2562151:-1:exon

position:2562151:-1
position: 2562151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Bpifc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Bpifc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BPI fold-containing family C protein
translation: MQTKQVPVLWACVLLWNLYISSSQTMYPGIKARITQRALDYGVQVGMKVMEDMAKEIVIPDLKGSESLEFLKIDYVKYNFSNIKINDFSLPNTSLSFVPGVGLRALSNHGTANISANWEVRAPLFQDSGAADLFLSGIYFTGIIVLIRNNFGHPVLKLQDCHAQVSHARVSFSGGLSVLYNSFAEPMEKPILRNLNEMLCPIAIDQVEAFNVNISALEVLTKIDNYTVLDCSLLSPPEVTENHLDLSLKGAFYPLESLVDPPFLPTPFELPENRDSMLYIGISEYFFKSASFAHFVTGALEVTLSTKEISNYFNQNTQGIGSVLSKIAEIYILSQPFMLQIMATGPPVINLHPNSFSLEFPASVIMLTQLENSTIKHIVSMDFIASTSVGLAILGQKLICSLSLNRFRLSLPENSHRDAKVVRFENILSSILHFGVLPLANTKLQQGFPLPNPYNISFVNSDIQVLEDFLLISTDLTHETSSKQQPNLHSWGGLNLVNTPWREQPTH
SIO_010081: Bpifc
subclass of: SO_0000673
so part of: Bpifc
location: complement(join(2562029..2562151,2563438..2563514,2564841..2564904,2567920..2567962,2579666..2579733,2580478..2580648,2581984..2582037,2585395..2585571,2587074..2587165,2591022..2591082,2592659..2592722,2592824..2592979,2594765..2594893,2597876..2597996,2603079..2603202))
location: region:2562029-2603202:-1
so has part: feature:2603079-2603202:-1:exon
so has part: feature:2597876-2597996:-1:exon
so has part: feature:2594765-2594893:-1:exon
so has part: feature:2592824-2592979:-1:exon
so has part: feature:2592659-2592722:-1:exon
so has part: feature:2591022-2591082:-1:exon
so has part: feature:2587074-2587165:-1:exon
so has part: feature:2585395-2585571:-1:exon
so has part: feature:2581984-2582037:-1:exon
so has part: feature:2580478-2580648:-1:exon
so has part: feature:2579666-2579733:-1:exon
so has part: feature:2567920-2567962:-1:exon
so has part: feature:2564841-2564904:-1:exon
so has part: feature:2563438-2563514:-1:exon
so has part: feature:2562029-2562151:-1:exon

XP_036025959.1
type: Protein
SIO_000068: ncbiprotein

position:2562029:-1
position: 2562029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2603079-2603202:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2597876-2597996:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2594765-2594893:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2592824-2592979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2592659-2592722:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2591022-2591082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2587074-2587165:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2585395-2585571:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2581984-2582037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2580478-2580648:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2579666-2579733:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2567920-2567962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2564841-2564904:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2563438-2563514:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2562029-2562151:-1:exon

Fbxo7
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Fbxo7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2631719..2663764
location: region:2631719-2663764:1
so has part: feature:2631719-2663764:1:exon
subclass of: SO_0000010

118571001
type: Gene
SIO_000068: ncbigene

position:2631719:1
position: 2631719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2663764:1
position: 2663764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2631719-2663764:1:exon

Fbxo7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Fbxo7
product: F-box protein 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169839.1
SIO_010081: Fbxo7
subclass of: SO_0000673
so part of: Fbxo7
location: join(2631719..2631965,2634718..2635012,2639248..2639475,2641056..2641197,2643535..2643618,2657991..2658086,2659447..2659623,2662069..2662106,2663125..2663764)
location: region:2631719-2663764:1
so has part: feature:2631719-2631965:1:exon
so has part: feature:2634718-2635012:1:exon
so has part: feature:2639248-2639475:1:exon
so has part: feature:2641056-2641197:1:exon
so has part: feature:2643535-2643618:1:exon
so has part: feature:2657991-2658086:1:exon
so has part: feature:2659447-2659623:1:exon
so has part: feature:2662069-2662106:1:exon
so has part: feature:2663125-2663764:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2631719-2631965:1:exon

position:2631965:1
position: 2631965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2634718-2635012:1:exon

position:2634718:1
position: 2634718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2635012:1
position: 2635012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2639248-2639475:1:exon

position:2639248:1
position: 2639248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2639475:1
position: 2639475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2641056-2641197:1:exon

position:2641056:1
position: 2641056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2641197:1
position: 2641197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2643535-2643618:1:exon

position:2643535:1
position: 2643535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2643618:1
position: 2643618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2657991-2658086:1:exon

position:2657991:1
position: 2657991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2658086:1
position: 2658086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2659447-2659623:1:exon

position:2659447:1
position: 2659447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2659623:1
position: 2659623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2662069-2662106:1:exon

position:2662069:1
position: 2662069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2662106:1
position: 2662106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2663125-2663764:1:exon

position:2663125:1
position: 2663125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fbxo7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Fbxo7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 7 isoform X1
translation: MRLRVRLQKRTQPLEVPEPEPTLGQLRAHLSQALLPTWGFSSDTRFAITLNNKDALTGDEETLASYGIVSGDLICLVLEDDMPAPNLPSSTDSEHSSLQNNDQASLAASSRQASIPDEQCSGSSQGQATQFDAWDDDSMEGPSQSVEAELIQDAMVTEEDSGFRPLEPMLCSETEDGQVPHSLETLYQSAGCSSVNDALVVLVHLLMLESGYMPQGTEAKAAVMPEKWKLSGVYKLQYTHPLCEGGTVVLACVPLETHMIINATIKMDGGIKNVKSVQLQPRSYVCGVEPGEGAAKVYKDLKKLSRLFKDKLVYPLLAFTRQVLNLPDVFGLIVLPLELKLRIFRLLDVHSVLALSAVCHDLFLASNDPLLWRCLYLRDFRDGTARGPDTDWKELYRKRHIQRKEAQRMRHMMFLPSSTHSIPFCPIPVYPYPMPFPSASLLPPGIIGGEYDARPILPSVGDPANLLIPRPGEIPSPFPPLRPRFDPIGPLPGPNPLLPGRGGPNNRFPFRPSRGQSADSRLPFM
SIO_010081: Fbxo7
subclass of: SO_0000673
so part of: Fbxo7
location: join(2631844..2631965,2634718..2635012,2639248..2639475,2641056..2641197,2643535..2643618,2657991..2658086,2659447..2659623,2662069..2662106,2663125..2663520)
location: region:2631844-2663520:1
so has part: feature:2631844-2631965:1:exon
so has part: feature:2634718-2635012:1:exon
so has part: feature:2639248-2639475:1:exon
so has part: feature:2641056-2641197:1:exon
so has part: feature:2643535-2643618:1:exon
so has part: feature:2657991-2658086:1:exon
so has part: feature:2659447-2659623:1:exon
so has part: feature:2662069-2662106:1:exon
so has part: feature:2663125-2663520:1:exon

XP_036025732.1
type: Protein
SIO_000068: ncbiprotein

position:2631844:1
position: 2631844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2663520:1
position: 2663520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2631844-2631965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2634718-2635012:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2639248-2639475:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2641056-2641197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2643535-2643618:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2657991-2658086:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2659447-2659623:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2662069-2662106:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2663125-2663520:1:exon

Fbxo7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Fbxo7
product: F-box protein 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_036169840.1
SIO_010081: Fbxo7
subclass of: SO_0000673
so part of: Fbxo7
location: join(2631976..2632121,2634870..2635012,2639248..2639475,2641056..2641197,2643535..2643618,2657991..2658086,2659447..2659623,2662069..2662106,2663125..2663764)
location: region:2631976-2663764:1
so has part: feature:2631976-2632121:1:exon
so has part: feature:2634870-2635012:1:exon
so has part: feature:2639248-2639475:1:exon
so has part: feature:2641056-2641197:1:exon
so has part: feature:2643535-2643618:1:exon
so has part: feature:2657991-2658086:1:exon
so has part: feature:2659447-2659623:1:exon
so has part: feature:2662069-2662106:1:exon
so has part: feature:2663125-2663764:1:exon

position:2631976:1
position: 2631976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2631976-2632121:1:exon

position:2632121:1
position: 2632121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2634870-2635012:1:exon

position:2634870:1
position: 2634870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2639248-2639475:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2641056-2641197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2643535-2643618:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2657991-2658086:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2659447-2659623:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2662069-2662106:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2663125-2663764:1:exon

Fbxo7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Fbxo7
product: F-box protein 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169841.1
SIO_010081: Fbxo7
subclass of: SO_0000673
so part of: Fbxo7
location: join(2631977..2632121,2634718..2635012,2639248..2639475,2641056..2641197,2643535..2643618,2657991..2658086,2659447..2659623,2662069..2662106,2663125..2663764)
location: region:2631977-2663764:1
so has part: feature:2631977-2632121:1:exon
so has part: feature:2634718-2635012:1:exon
so has part: feature:2639248-2639475:1:exon
so has part: feature:2641056-2641197:1:exon
so has part: feature:2643535-2643618:1:exon
so has part: feature:2657991-2658086:1:exon
so has part: feature:2659447-2659623:1:exon
so has part: feature:2662069-2662106:1:exon
so has part: feature:2663125-2663764:1:exon

position:2631977:1
position: 2631977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2631977-2632121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2634718-2635012:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2639248-2639475:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2641056-2641197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2643535-2643618:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2657991-2658086:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2659447-2659623:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2662069-2662106:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2663125-2663764:1:exon

Fbxo7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Fbxo7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 7 isoform X2
translation: MAQPPPGTAVSPDSEHSSLQNNDQASLAASSRQASIPDEQCSGSSQGQATQFDAWDDDSMEGPSQSVEAELIQDAMVTEEDSGFRPLEPMLCSETEDGQVPHSLETLYQSAGCSSVNDALVVLVHLLMLESGYMPQGTEAKAAVMPEKWKLSGVYKLQYTHPLCEGGTVVLACVPLETHMIINATIKMDGGIKNVKSVQLQPRSYVCGVEPGEGAAKVYKDLKKLSRLFKDKLVYPLLAFTRQVLNLPDVFGLIVLPLELKLRIFRLLDVHSVLALSAVCHDLFLASNDPLLWRCLYLRDFRDGTARGPDTDWKELYRKRHIQRKEAQRMRHMMFLPSSTHSIPFCPIPVYPYPMPFPSASLLPPGIIGGEYDARPILPSVGDPANLLIPRPGEIPSPFPPLRPRFDPIGPLPGPNPLLPGRGGPNNRFPFRPSRGQSADSRLPFM
SIO_010081: Fbxo7
subclass of: SO_0000673
so part of: Fbxo7
location: join(2632085..2632121,2634870..2635012,2639248..2639475,2641056..2641197,2643535..2643618,2657991..2658086,2659447..2659623,2662069..2662106,2663125..2663520)
location: region:2632085-2663520:1
so has part: feature:2632085-2632121:1:exon
so has part: feature:2634870-2635012:1:exon
so has part: feature:2639248-2639475:1:exon
so has part: feature:2641056-2641197:1:exon
so has part: feature:2643535-2643618:1:exon
so has part: feature:2657991-2658086:1:exon
so has part: feature:2659447-2659623:1:exon
so has part: feature:2662069-2662106:1:exon
so has part: feature:2663125-2663520:1:exon

XP_036025733.1
type: Protein
SIO_000068: ncbiprotein

position:2632085:1
position: 2632085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2632085-2632121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2634870-2635012:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2639248-2639475:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2641056-2641197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2643535-2643618:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2657991-2658086:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2659447-2659623:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2662069-2662106:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2663125-2663520:1:exon

Fbxo7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Fbxo7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 7 isoform X3
translation: MPAPNLPSSTDSEHSSLQNNDQASLAASSRQASIPDEQCSGSSQGQATQFDAWDDDSMEGPSQSVEAELIQDAMVTEEDSGFRPLEPMLCSETEDGQVPHSLETLYQSAGCSSVNDALVVLVHLLMLESGYMPQGTEAKAAVMPEKWKLSGVYKLQYTHPLCEGGTVVLACVPLETHMIINATIKMDGGIKNVKSVQLQPRSYVCGVEPGEGAAKVYKDLKKLSRLFKDKLVYPLLAFTRQVLNLPDVFGLIVLPLELKLRIFRLLDVHSVLALSAVCHDLFLASNDPLLWRCLYLRDFRDGTARGPDTDWKELYRKRHIQRKEAQRMRHMMFLPSSTHSIPFCPIPVYPYPMPFPSASLLPPGIIGGEYDARPILPSVGDPANLLIPRPGEIPSPFPPLRPRFDPIGPLPGPNPLLPGRGGPNNRFPFRPSRGQSADSRLPFM
SIO_010081: Fbxo7
subclass of: SO_0000673
so part of: Fbxo7
location: join(2634839..2635012,2639248..2639475,2641056..2641197,2643535..2643618,2657991..2658086,2659447..2659623,2662069..2662106,2663125..2663520)
location: region:2634839-2663520:1
so has part: feature:2634839-2635012:1:exon
so has part: feature:2639248-2639475:1:exon
so has part: feature:2641056-2641197:1:exon
so has part: feature:2643535-2643618:1:exon
so has part: feature:2657991-2658086:1:exon
so has part: feature:2659447-2659623:1:exon
so has part: feature:2662069-2662106:1:exon
so has part: feature:2663125-2663520:1:exon

XP_036025734.1
type: Protein
SIO_000068: ncbiprotein

position:2634839:1
position: 2634839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2634839-2635012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2639248-2639475:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2641056-2641197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2643535-2643618:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2657991-2658086:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2659447-2659623:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2662069-2662106:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2663125-2663520:1:exon

Syn3
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Syn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2670099..3097921)
location: region:2670099-3097921:-1
so has part: feature:2670099-3097921:-1:exon
subclass of: SO_0000010

118570804
type: Gene
SIO_000068: ncbigene

position:2670099:-1
position: 2670099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3097921:-1
position: 3097921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2670099-3097921:-1:exon

Syn3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Syn3
product: synapsin III, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169415.1
SIO_010081: Syn3
subclass of: SO_0000673
so part of: Syn3
location: complement(join(2670099..2671618,2673740..2674031,2678389..2678476,2679123..2679257,2684057..2684159,2688435..2688509,2692546..2692688,2743630..2743692,2952616..2952705,2955644..2955800,3008161..3008252,3053084..3053141,3068872..3069339,3097795..3097921))
location: region:2670099-3097921:-1
so has part: feature:3097795-3097921:-1:exon
so has part: feature:3068872-3069339:-1:exon
so has part: feature:3053084-3053141:-1:exon
so has part: feature:3008161-3008252:-1:exon
so has part: feature:2955644-2955800:-1:exon
so has part: feature:2952616-2952705:-1:exon
so has part: feature:2743630-2743692:-1:exon
so has part: feature:2692546-2692688:-1:exon
so has part: feature:2688435-2688509:-1:exon
so has part: feature:2684057-2684159:-1:exon
so has part: feature:2679123-2679257:-1:exon
so has part: feature:2678389-2678476:-1:exon
so has part: feature:2673740-2674031:-1:exon
so has part: feature:2670099-2671618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3097795-3097921:-1:exon

position:3097795:-1
position: 3097795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3068872-3069339:-1:exon

position:3068872:-1
position: 3068872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3069339:-1
position: 3069339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3053084-3053141:-1:exon

position:3053084:-1
position: 3053084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3053141:-1
position: 3053141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3008161-3008252:-1:exon

position:3008161:-1
position: 3008161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3008252:-1
position: 3008252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2955644-2955800:-1:exon

position:2955644:-1
position: 2955644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2955800:-1
position: 2955800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2952616-2952705:-1:exon

position:2952616:-1
position: 2952616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2952705:-1
position: 2952705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2743630-2743692:-1:exon

position:2743630:-1
position: 2743630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2743692:-1
position: 2743692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2692546-2692688:-1:exon

position:2692546:-1
position: 2692546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2692688:-1
position: 2692688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2688435-2688509:-1:exon

position:2688435:-1
position: 2688435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2688509:-1
position: 2688509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2684057-2684159:-1:exon

position:2684057:-1
position: 2684057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2684159:-1
position: 2684159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2679123-2679257:-1:exon

position:2679123:-1
position: 2679123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2679257:-1
position: 2679257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2678389-2678476:-1:exon

position:2678389:-1
position: 2678389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2678476:-1
position: 2678476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2673740-2674031:-1:exon

position:2673740:-1
position: 2673740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2674031:-1
position: 2674031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2670099-2671618:-1:exon

position:2671618:-1
position: 2671618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Syn3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Syn3
product: synapsin III, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_036169416.1
SIO_010081: Syn3
subclass of: SO_0000673
so part of: Syn3
location: complement(join(2670099..2671618,2673740..2674031,2678389..2678476,2679123..2679257,2684057..2684159,2688435..2688509,2692546..2692688,2743630..2743692,2952616..2952705,2955644..2955800,3008161..3008252,3053084..3053141,3068872..3069339,3097679..3097784))
location: region:2670099-3097784:-1
so has part: feature:3097679-3097784:-1:exon
so has part: feature:3068872-3069339:-1:exon
so has part: feature:3053084-3053141:-1:exon
so has part: feature:3008161-3008252:-1:exon
so has part: feature:2955644-2955800:-1:exon
so has part: feature:2952616-2952705:-1:exon
so has part: feature:2743630-2743692:-1:exon
so has part: feature:2692546-2692688:-1:exon
so has part: feature:2688435-2688509:-1:exon
so has part: feature:2684057-2684159:-1:exon
so has part: feature:2679123-2679257:-1:exon
so has part: feature:2678389-2678476:-1:exon
so has part: feature:2673740-2674031:-1:exon
so has part: feature:2670099-2671618:-1:exon

position:3097784:-1
position: 3097784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3097679-3097784:-1:exon

position:3097679:-1
position: 3097679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3068872-3069339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3053084-3053141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3008161-3008252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2955644-2955800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2952616-2952705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2743630-2743692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2692546-2692688:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2688435-2688509:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2684057-2684159:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2679123-2679257:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2678389-2678476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2673740-2674031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2670099-2671618:-1:exon

Syn3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Syn3
product: synapsin III, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_036169418.1
SIO_010081: Syn3
subclass of: SO_0000673
so part of: Syn3
location: complement(join(2670099..2671618,2673740..2674031,2678389..2678476,2679123..2679257,2684057..2684159,2688435..2688509,2692546..2692688,2743630..2743692,2952616..2952705,2955644..2955800,3008161..3008252,3053084..3053141,3068872..3069339,3096773..3096859))
location: region:2670099-3096859:-1
so has part: feature:3096773-3096859:-1:exon
so has part: feature:3068872-3069339:-1:exon
so has part: feature:3053084-3053141:-1:exon
so has part: feature:3008161-3008252:-1:exon
so has part: feature:2955644-2955800:-1:exon
so has part: feature:2952616-2952705:-1:exon
so has part: feature:2743630-2743692:-1:exon
so has part: feature:2692546-2692688:-1:exon
so has part: feature:2688435-2688509:-1:exon
so has part: feature:2684057-2684159:-1:exon
so has part: feature:2679123-2679257:-1:exon
so has part: feature:2678389-2678476:-1:exon
so has part: feature:2673740-2674031:-1:exon
so has part: feature:2670099-2671618:-1:exon

position:3096859:-1
position: 3096859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3096773-3096859:-1:exon

position:3096773:-1
position: 3096773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3068872-3069339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3053084-3053141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3008161-3008252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2955644-2955800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2952616-2952705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2743630-2743692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2692546-2692688:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2688435-2688509:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2684057-2684159:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2679123-2679257:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2678389-2678476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2673740-2674031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2670099-2671618:-1:exon

Syn3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Syn3
product: synapsin III, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_036169417.1
SIO_010081: Syn3
subclass of: SO_0000673
so part of: Syn3
location: complement(join(2670099..2671618,2673740..2674031,2678389..2678476,2679123..2679257,2684057..2684159,2688435..2688509,2692546..2692688,2743630..2743692,2952616..2952705,2955644..2955800,3008161..3008252,3053084..3053141,3068872..3069339,3093267..3093418))
location: region:2670099-3093418:-1
so has part: feature:3093267-3093418:-1:exon
so has part: feature:3068872-3069339:-1:exon
so has part: feature:3053084-3053141:-1:exon
so has part: feature:3008161-3008252:-1:exon
so has part: feature:2955644-2955800:-1:exon
so has part: feature:2952616-2952705:-1:exon
so has part: feature:2743630-2743692:-1:exon
so has part: feature:2692546-2692688:-1:exon
so has part: feature:2688435-2688509:-1:exon
so has part: feature:2684057-2684159:-1:exon
so has part: feature:2679123-2679257:-1:exon
so has part: feature:2678389-2678476:-1:exon
so has part: feature:2673740-2674031:-1:exon
so has part: feature:2670099-2671618:-1:exon

position:3093418:-1
position: 3093418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3093267-3093418:-1:exon

position:3093267:-1
position: 3093267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3068872-3069339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3053084-3053141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3008161-3008252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2955644-2955800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2952616-2952705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2743630-2743692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2692546-2692688:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2688435-2688509:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2684057-2684159:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2679123-2679257:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2678389-2678476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2673740-2674031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2670099-2671618:-1:exon

Syn3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Syn3
product: synapsin III, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036169419.1
SIO_010081: Syn3
subclass of: SO_0000673
so part of: Syn3
location: complement(join(2670099..2671618,2673740..2674031,2678389..2678476,2679123..2679257,2684057..2684159,2688435..2688509,2692546..2692688,2743630..2743692,2952616..2952705,2955644..2955800,3008161..3008252,3053084..3053141,3068872..3069339,3083050..3083151))
location: region:2670099-3083151:-1
so has part: feature:3083050-3083151:-1:exon
so has part: feature:3068872-3069339:-1:exon
so has part: feature:3053084-3053141:-1:exon
so has part: feature:3008161-3008252:-1:exon
so has part: feature:2955644-2955800:-1:exon
so has part: feature:2952616-2952705:-1:exon
so has part: feature:2743630-2743692:-1:exon
so has part: feature:2692546-2692688:-1:exon
so has part: feature:2688435-2688509:-1:exon
so has part: feature:2684057-2684159:-1:exon
so has part: feature:2679123-2679257:-1:exon
so has part: feature:2678389-2678476:-1:exon
so has part: feature:2673740-2674031:-1:exon
so has part: feature:2670099-2671618:-1:exon

position:3083151:-1
position: 3083151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3083050-3083151:-1:exon

position:3083050:-1
position: 3083050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3068872-3069339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3053084-3053141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3008161-3008252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2955644-2955800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2952616-2952705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2743630-2743692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2692546-2692688:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2688435-2688509:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2684057-2684159:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2679123-2679257:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2678389-2678476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2673740-2674031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2670099-2671618:-1:exon

Syn3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Syn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synapsin-3
translation: MNFLRRRLSDSSFVANLPNGYMPDLQRPESSSSSPASPATERRHPQPLAASFSSPGSSLFSSFSSAMKQTPQAPSGLMEPPTPVTPVVQRPRILLVIDDAHTDWSKYFHGKKVNGDIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKIVRSFKPDFILVRQHAYSMALAEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMLTAPHFPVVIKLGHAHAGMGKIKVENQHDYQDITSVVAMAKTYATTEAFIDSKYDIRIQKIGSNYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGRDYIIEVMGSSMPLIGEHVEEDKQVMADLVVSKMSQLLVPGSMVPSPLRPWGPQTKLAKSPGQGQLGPQLGQPQPRPPPQGGSRQAQSPQPPRSRSPSQQRLSPQGQQPVSPQSGSPQQQRSPGSPQLSRTSGGSSPNQASKPSASLGSHPRPPVQGRSTSQQGEEPQKSAPPYPHLNKSQSLTNSLSTSDASNRGTPSEDEAKAETIRNLRKSFASLFSD
SIO_010081: Syn3
subclass of: SO_0000673
so part of: Syn3
location: complement(join(2671486..2671618,2673740..2674031,2678389..2678476,2679123..2679257,2684057..2684159,2688435..2688509,2692546..2692688,2743630..2743692,2952616..2952705,2955644..2955800,3008161..3008252,3053084..3053141,3068872..3069182))
location: region:2671486-3069182:-1
so has part: feature:3068872-3069182:-1:exon
so has part: feature:3053084-3053141:-1:exon
so has part: feature:3008161-3008252:-1:exon
so has part: feature:2955644-2955800:-1:exon
so has part: feature:2952616-2952705:-1:exon
so has part: feature:2743630-2743692:-1:exon
so has part: feature:2692546-2692688:-1:exon
so has part: feature:2688435-2688509:-1:exon
so has part: feature:2684057-2684159:-1:exon
so has part: feature:2679123-2679257:-1:exon
so has part: feature:2678389-2678476:-1:exon
so has part: feature:2673740-2674031:-1:exon
so has part: feature:2671486-2671618:-1:exon

XP_036025308.1
type: Protein
SIO_000068: ncbiprotein

position:2671486:-1
position: 2671486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3069182:-1
position: 3069182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3068872-3069182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3053084-3053141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3008161-3008252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2955644-2955800:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2952616-2952705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2743630-2743692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2692546-2692688:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2688435-2688509:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2684057-2684159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2679123-2679257:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2678389-2678476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2673740-2674031:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2671486-2671618:-1:exon

Syn3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Syn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synapsin-3
translation: MNFLRRRLSDSSFVANLPNGYMPDLQRPESSSSSPASPATERRHPQPLAASFSSPGSSLFSSFSSAMKQTPQAPSGLMEPPTPVTPVVQRPRILLVIDDAHTDWSKYFHGKKVNGDIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKIVRSFKPDFILVRQHAYSMALAEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMLTAPHFPVVIKLGHAHAGMGKIKVENQHDYQDITSVVAMAKTYATTEAFIDSKYDIRIQKIGSNYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGRDYIIEVMGSSMPLIGEHVEEDKQVMADLVVSKMSQLLVPGSMVPSPLRPWGPQTKLAKSPGQGQLGPQLGQPQPRPPPQGGSRQAQSPQPPRSRSPSQQRLSPQGQQPVSPQSGSPQQQRSPGSPQLSRTSGGSSPNQASKPSASLGSHPRPPVQGRSTSQQGEEPQKSAPPYPHLNKSQSLTNSLSTSDASNRGTPSEDEAKAETIRNLRKSFASLFSD
SIO_010081: Syn3
subclass of: SO_0000673
so part of: Syn3
location: complement(join(2671486..2671618,2673740..2674031,2678389..2678476,2679123..2679257,2684057..2684159,2688435..2688509,2692546..2692688,2743630..2743692,2952616..2952705,2955644..2955800,3008161..3008252,3053084..3053141,3068872..3069182))
location: region:2671486-3069182:-1
so has part: feature:3068872-3069182:-1:exon
so has part: feature:3053084-3053141:-1:exon
so has part: feature:3008161-3008252:-1:exon
so has part: feature:2955644-2955800:-1:exon
so has part: feature:2952616-2952705:-1:exon
so has part: feature:2743630-2743692:-1:exon
so has part: feature:2692546-2692688:-1:exon
so has part: feature:2688435-2688509:-1:exon
so has part: feature:2684057-2684159:-1:exon
so has part: feature:2679123-2679257:-1:exon
so has part: feature:2678389-2678476:-1:exon
so has part: feature:2673740-2674031:-1:exon
so has part: feature:2671486-2671618:-1:exon

XP_036025309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3068872-3069182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3053084-3053141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3008161-3008252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2955644-2955800:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2952616-2952705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2743630-2743692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2692546-2692688:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2688435-2688509:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2684057-2684159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2679123-2679257:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2678389-2678476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2673740-2674031:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2671486-2671618:-1:exon

Syn3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Syn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synapsin-3
translation: MNFLRRRLSDSSFVANLPNGYMPDLQRPESSSSSPASPATERRHPQPLAASFSSPGSSLFSSFSSAMKQTPQAPSGLMEPPTPVTPVVQRPRILLVIDDAHTDWSKYFHGKKVNGDIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKIVRSFKPDFILVRQHAYSMALAEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMLTAPHFPVVIKLGHAHAGMGKIKVENQHDYQDITSVVAMAKTYATTEAFIDSKYDIRIQKIGSNYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGRDYIIEVMGSSMPLIGEHVEEDKQVMADLVVSKMSQLLVPGSMVPSPLRPWGPQTKLAKSPGQGQLGPQLGQPQPRPPPQGGSRQAQSPQPPRSRSPSQQRLSPQGQQPVSPQSGSPQQQRSPGSPQLSRTSGGSSPNQASKPSASLGSHPRPPVQGRSTSQQGEEPQKSAPPYPHLNKSQSLTNSLSTSDASNRGTPSEDEAKAETIRNLRKSFASLFSD
SIO_010081: Syn3
subclass of: SO_0000673
so part of: Syn3
location: complement(join(2671486..2671618,2673740..2674031,2678389..2678476,2679123..2679257,2684057..2684159,2688435..2688509,2692546..2692688,2743630..2743692,2952616..2952705,2955644..2955800,3008161..3008252,3053084..3053141,3068872..3069182))
location: region:2671486-3069182:-1
so has part: feature:3068872-3069182:-1:exon
so has part: feature:3053084-3053141:-1:exon
so has part: feature:3008161-3008252:-1:exon
so has part: feature:2955644-2955800:-1:exon
so has part: feature:2952616-2952705:-1:exon
so has part: feature:2743630-2743692:-1:exon
so has part: feature:2692546-2692688:-1:exon
so has part: feature:2688435-2688509:-1:exon
so has part: feature:2684057-2684159:-1:exon
so has part: feature:2679123-2679257:-1:exon
so has part: feature:2678389-2678476:-1:exon
so has part: feature:2673740-2674031:-1:exon
so has part: feature:2671486-2671618:-1:exon

XP_036025310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3068872-3069182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3053084-3053141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3008161-3008252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2955644-2955800:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2952616-2952705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2743630-2743692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2692546-2692688:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2688435-2688509:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2684057-2684159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2679123-2679257:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2678389-2678476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2673740-2674031:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2671486-2671618:-1:exon

Syn3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Syn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synapsin-3
translation: MNFLRRRLSDSSFVANLPNGYMPDLQRPESSSSSPASPATERRHPQPLAASFSSPGSSLFSSFSSAMKQTPQAPSGLMEPPTPVTPVVQRPRILLVIDDAHTDWSKYFHGKKVNGDIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKIVRSFKPDFILVRQHAYSMALAEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMLTAPHFPVVIKLGHAHAGMGKIKVENQHDYQDITSVVAMAKTYATTEAFIDSKYDIRIQKIGSNYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGRDYIIEVMGSSMPLIGEHVEEDKQVMADLVVSKMSQLLVPGSMVPSPLRPWGPQTKLAKSPGQGQLGPQLGQPQPRPPPQGGSRQAQSPQPPRSRSPSQQRLSPQGQQPVSPQSGSPQQQRSPGSPQLSRTSGGSSPNQASKPSASLGSHPRPPVQGRSTSQQGEEPQKSAPPYPHLNKSQSLTNSLSTSDASNRGTPSEDEAKAETIRNLRKSFASLFSD
SIO_010081: Syn3
subclass of: SO_0000673
so part of: Syn3
location: complement(join(2671486..2671618,2673740..2674031,2678389..2678476,2679123..2679257,2684057..2684159,2688435..2688509,2692546..2692688,2743630..2743692,2952616..2952705,2955644..2955800,3008161..3008252,3053084..3053141,3068872..3069182))
location: region:2671486-3069182:-1
so has part: feature:3068872-3069182:-1:exon
so has part: feature:3053084-3053141:-1:exon
so has part: feature:3008161-3008252:-1:exon
so has part: feature:2955644-2955800:-1:exon
so has part: feature:2952616-2952705:-1:exon
so has part: feature:2743630-2743692:-1:exon
so has part: feature:2692546-2692688:-1:exon
so has part: feature:2688435-2688509:-1:exon
so has part: feature:2684057-2684159:-1:exon
so has part: feature:2679123-2679257:-1:exon
so has part: feature:2678389-2678476:-1:exon
so has part: feature:2673740-2674031:-1:exon
so has part: feature:2671486-2671618:-1:exon

XP_036025311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3068872-3069182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3053084-3053141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3008161-3008252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2955644-2955800:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2952616-2952705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2743630-2743692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2692546-2692688:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2688435-2688509:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2684057-2684159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2679123-2679257:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2678389-2678476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2673740-2674031:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2671486-2671618:-1:exon

Syn3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Syn3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synapsin-3
translation: MNFLRRRLSDSSFVANLPNGYMPDLQRPESSSSSPASPATERRHPQPLAASFSSPGSSLFSSFSSAMKQTPQAPSGLMEPPTPVTPVVQRPRILLVIDDAHTDWSKYFHGKKVNGDIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKIVRSFKPDFILVRQHAYSMALAEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMLTAPHFPVVIKLGHAHAGMGKIKVENQHDYQDITSVVAMAKTYATTEAFIDSKYDIRIQKIGSNYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGRDYIIEVMGSSMPLIGEHVEEDKQVMADLVVSKMSQLLVPGSMVPSPLRPWGPQTKLAKSPGQGQLGPQLGQPQPRPPPQGGSRQAQSPQPPRSRSPSQQRLSPQGQQPVSPQSGSPQQQRSPGSPQLSRTSGGSSPNQASKPSASLGSHPRPPVQGRSTSQQGEEPQKSAPPYPHLNKSQSLTNSLSTSDASNRGTPSEDEAKAETIRNLRKSFASLFSD
SIO_010081: Syn3
subclass of: SO_0000673
so part of: Syn3
location: complement(join(2671486..2671618,2673740..2674031,2678389..2678476,2679123..2679257,2684057..2684159,2688435..2688509,2692546..2692688,2743630..2743692,2952616..2952705,2955644..2955800,3008161..3008252,3053084..3053141,3068872..3069182))
location: region:2671486-3069182:-1
so has part: feature:3068872-3069182:-1:exon
so has part: feature:3053084-3053141:-1:exon
so has part: feature:3008161-3008252:-1:exon
so has part: feature:2955644-2955800:-1:exon
so has part: feature:2952616-2952705:-1:exon
so has part: feature:2743630-2743692:-1:exon
so has part: feature:2692546-2692688:-1:exon
so has part: feature:2688435-2688509:-1:exon
so has part: feature:2684057-2684159:-1:exon
so has part: feature:2679123-2679257:-1:exon
so has part: feature:2678389-2678476:-1:exon
so has part: feature:2673740-2674031:-1:exon
so has part: feature:2671486-2671618:-1:exon

XP_036025312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3068872-3069182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3053084-3053141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3008161-3008252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2955644-2955800:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2952616-2952705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2743630-2743692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2692546-2692688:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2688435-2688509:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2684057-2684159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2679123-2679257:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2678389-2678476:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2673740-2674031:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2671486-2671618:-1:exon

Timp3
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Timp3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2902956..2950516
location: region:2902956-2950516:1
so has part: feature:2902956-2950516:1:exon
subclass of: SO_0000010

118570805
type: Gene
SIO_000068: ncbigene

position:2902956:1
position: 2902956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2950516:1
position: 2950516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2902956-2950516:1:exon

Timp3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Timp3
product: TIMP metallopeptidase inhibitor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169420.1
SIO_010081: Timp3
subclass of: SO_0000673
so part of: Timp3
location: join(2902956..2903456,2939472..2939554,2944784..2944895,2945418..2945539,2946725..2950516)
location: region:2902956-2950516:1
so has part: feature:2902956-2903456:1:exon
so has part: feature:2939472-2939554:1:exon
so has part: feature:2944784-2944895:1:exon
so has part: feature:2945418-2945539:1:exon
so has part: feature:2946725-2950516:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2902956-2903456:1:exon

position:2903456:1
position: 2903456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2939472-2939554:1:exon

position:2939472:1
position: 2939472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2939554:1
position: 2939554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2944784-2944895:1:exon

position:2944784:1
position: 2944784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2944895:1
position: 2944895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2945418-2945539:1:exon

position:2945418:1
position: 2945418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2945539:1
position: 2945539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2946725-2950516:1:exon

position:2946725:1
position: 2946725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Timp3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Timp3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metalloproteinase inhibitor 3
translation: MTPWLGLVVLLGCWSLGHWGAEACTCSPSHPQDAFCNSDIVIRAKVVGKKLVKEGPFGTLVYTIKQMKMYRGFSKMPHVQYIHTEASESLCGLKLEVNKYQYLLTGRVYEGKMYTGLCNFVERWDQLTLSQRKGLNYRYHLGCNCKIKSCYYLPCFVTSKNECLWTDMLSNFGYPGYQSKHYACIRQKGGYCSWYRGWAPPDKSISNATDP
SIO_010081: Timp3
subclass of: SO_0000673
so part of: Timp3
location: join(2903336..2903456,2939472..2939554,2944784..2944895,2945418..2945539,2946725..2946922)
location: region:2903336-2946922:1
so has part: feature:2903336-2903456:1:exon
so has part: feature:2939472-2939554:1:exon
so has part: feature:2944784-2944895:1:exon
so has part: feature:2945418-2945539:1:exon
so has part: feature:2946725-2946922:1:exon

XP_036025313.1
type: Protein
SIO_000068: ncbiprotein

position:2903336:1
position: 2903336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2946922:1
position: 2946922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2903336-2903456:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2939472-2939554:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2944784-2944895:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2945418-2945539:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2946725-2946922:1:exon

LOC118571242
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118571242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6269154..6270081)
location: region:6269154-6270081:-1
so has part: feature:6269154-6270081:-1:exon

118571242
type: Gene
SIO_000068: ncbigene

position:6269154:-1
position: 6269154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6270081:-1
position: 6270081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6269154-6270081:-1:exon

LOC118571242
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118571242
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118571242
subclass of: SO_0000673
so part of: LOC118571242
location: complement(6269154..6270081)
location: region:6269154-6270081:-1
so has part: feature:6269154-6270081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6269154-6270081:-1:exon

LOC118571260
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118571260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6291853..6294510)
location: region:6291853-6294510:-1
so has part: feature:6291853-6294510:-1:exon
subclass of: SO_0000010

118571260
type: Gene
SIO_000068: ncbigene

position:6291853:-1
position: 6291853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6294510:-1
position: 6294510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6291853-6294510:-1:exon

LOC118571260
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118571260
product: serine/threonine-protein kinase PLK1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036170218.1
SIO_010081: LOC118571260
subclass of: SO_0000673
so part of: LOC118571260
location: complement(join(6291853..6292708,6292806..6292960,6293139..6293261,6294333..6294510))
location: region:6291853-6294510:-1
so has part: feature:6294333-6294510:-1:exon
so has part: feature:6293139-6293261:-1:exon
so has part: feature:6292806-6292960:-1:exon
so has part: feature:6291853-6292708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6294333-6294510:-1:exon

position:6294333:-1
position: 6294333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6293139-6293261:-1:exon

position:6293139:-1
position: 6293139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6293261:-1
position: 6293261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6292806-6292960:-1:exon

position:6292806:-1
position: 6292806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6292960:-1
position: 6292960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6291853-6292708:-1:exon

position:6292708:-1
position: 6292708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118571260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118571260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PLK1-like
translation: MKVADKARKLARAPTDLQKARVQRDAGPSAPVAAPLLKKIPEVLVDKCSGCLYVRGRFLNSRRGWPNQCSVSIPEEAEDPACIPIFWVSQWVDQSKKYGLGYQLCDNSTGALFNDSTCLVLYNDGDSLQYIDQDGTESYPTMSSHPNSLMKKITLLKYFRNYMSEHLLKAGANMKAGANMKAGANMQAGVNTTPWEGDELAQLPYLKNGSAQATASFCTSAMALYRLTSSRCAGACTWGGWVGWKCCPFHPVWGLPPLCLDLRHQLSSSPTPFFPPRTTPNLSCAP
SIO_010081: LOC118571260
subclass of: SO_0000673
so part of: LOC118571260
location: complement(join(6292304..6292708,6292806..6292960,6293139..6293261,6294333..6294510))
location: region:6292304-6294510:-1
so has part: feature:6294333-6294510:-1:exon
so has part: feature:6293139-6293261:-1:exon
so has part: feature:6292806-6292960:-1:exon
so has part: feature:6292304-6292708:-1:exon

XP_036026111.1
type: Protein
SIO_000068: ncbiprotein

position:6292304:-1
position: 6292304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6294333-6294510:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6293139-6293261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6292806-6292960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6292304-6292708:-1:exon

LOC118571241
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118571241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6362030..6362585
location: region:6362030-6362585:1
so has part: feature:6362030-6362585:1:exon

118571241
type: Gene
SIO_000068: ncbigene

position:6362030:1
position: 6362030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6362585:1
position: 6362585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6362030-6362585:1:exon

LOC118571241
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118571241
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
pseudo: true
SIO_010081: LOC118571241
subclass of: SO_0000673
so part of: LOC118571241
location: 6362030..6362585
location: region:6362030-6362585:1
so has part: feature:6362030-6362585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6362030-6362585:1:exon

C20H12orf45
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: C20H12orf45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6382532..6390859)
location: region:6382532-6390859:-1
so has part: feature:6382532-6390859:-1:exon
subclass of: SO_0000010

118571033
type: Gene
SIO_000068: ncbigene

position:6382532:-1
position: 6382532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6390859:-1
position: 6390859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6382532-6390859:-1:exon

C20H12orf45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: C20H12orf45
product: chromosome 20 C12orf45 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169913.1
SIO_010081: C20H12orf45
subclass of: SO_0000673
so part of: C20H12orf45
location: complement(join(6382532..6385275,6386999..6387135,6388629..6388715,6390706..6390859))
location: region:6382532-6390859:-1
so has part: feature:6390706-6390859:-1:exon
so has part: feature:6388629-6388715:-1:exon
so has part: feature:6386999-6387135:-1:exon
so has part: feature:6382532-6385275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6390706-6390859:-1:exon

position:6390706:-1
position: 6390706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6388629-6388715:-1:exon

position:6388629:-1
position: 6388629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6388715:-1
position: 6388715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6386999-6387135:-1:exon

position:6386999:-1
position: 6386999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6387135:-1
position: 6387135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6382532-6385275:-1:exon

position:6385275:-1
position: 6385275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C20H12orf45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: C20H12orf45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C12orf45 homolog
translation: MELHGESVSGPTASSSPGACSQVTVSRELLTAGSEGSGGIWDQLLINSKPHSKKTSALQTVRMQRSPLLDQVQAFLPQMAQANEKLRKEMAAAPADCFNIENMDGTSGDIVQMDVALFEMNRSDSKEEDSSEESSQDGSEESSESEDEDCIPSEVTIDTIKFPNAEGGRGKIEVLDSPASKKKKH
SIO_010081: C20H12orf45
subclass of: SO_0000673
so part of: C20H12orf45
location: complement(join(6385057..6385275,6386999..6387135,6388629..6388715,6390706..6390820))
location: region:6385057-6390820:-1
so has part: feature:6390706-6390820:-1:exon
so has part: feature:6388629-6388715:-1:exon
so has part: feature:6386999-6387135:-1:exon
so has part: feature:6385057-6385275:-1:exon

XP_036025806.1
type: Protein
SIO_000068: ncbiprotein

position:6385057:-1
position: 6385057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6390820:-1
position: 6390820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6390706-6390820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6388629-6388715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6386999-6387135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6385057-6385275:-1:exon

Slc41a2
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Slc41a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6411904..6536221
location: region:6411904-6536221:1
so has part: feature:6411904-6536221:1:exon
subclass of: SO_0000010

118571032
type: Gene
SIO_000068: ncbigene

position:6411904:1
position: 6411904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6536221:1
position: 6536221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6411904-6536221:1:exon

Slc41a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Slc41a2
product: solute carrier family 41 member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_036169912.1
SIO_010081: Slc41a2
subclass of: SO_0000673
so part of: Slc41a2
location: join(6411904..6412172,6436605..6437319,6441160..6441267,6452369..6452440,6455960..6456104,6459891..6460037,6476091..6476238,6478325..6478404,6508434..6508565,6510250..6510398,6535153..6536221)
location: region:6411904-6536221:1
so has part: feature:6411904-6412172:1:exon
so has part: feature:6436605-6437319:1:exon
so has part: feature:6441160-6441267:1:exon
so has part: feature:6452369-6452440:1:exon
so has part: feature:6455960-6456104:1:exon
so has part: feature:6459891-6460037:1:exon
so has part: feature:6476091-6476238:1:exon
so has part: feature:6478325-6478404:1:exon
so has part: feature:6508434-6508565:1:exon
so has part: feature:6510250-6510398:1:exon
so has part: feature:6535153-6536221:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6411904-6412172:1:exon

position:6412172:1
position: 6412172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6436605-6437319:1:exon

position:6436605:1
position: 6436605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6437319:1
position: 6437319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6441160-6441267:1:exon

position:6441160:1
position: 6441160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6441267:1
position: 6441267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6452369-6452440:1:exon

position:6452369:1
position: 6452369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6452440:1
position: 6452440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6455960-6456104:1:exon

position:6455960:1
position: 6455960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6456104:1
position: 6456104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6459891-6460037:1:exon

position:6459891:1
position: 6459891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6460037:1
position: 6460037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6476091-6476238:1:exon

position:6476091:1
position: 6476091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6476238:1
position: 6476238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6478325-6478404:1:exon

position:6478325:1
position: 6478325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6478404:1
position: 6478404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6508434-6508565:1:exon

position:6508434:1
position: 6508434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6508565:1
position: 6508565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6510250-6510398:1:exon

position:6510250:1
position: 6510250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6510398:1
position: 6510398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6535153-6536221:1:exon

position:6535153:1
position: 6535153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slc41a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Slc41a2
product: solute carrier family 41 member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_036169910.1
SIO_010081: Slc41a2
subclass of: SO_0000673
so part of: Slc41a2
location: join(6412389..6412635,6436605..6437319,6441160..6441267,6452369..6452440,6455960..6456104,6459891..6460037,6476091..6476238,6478325..6478404,6508434..6508565,6510250..6510398,6535153..6536221)
location: region:6412389-6536221:1
so has part: feature:6412389-6412635:1:exon
so has part: feature:6436605-6437319:1:exon
so has part: feature:6441160-6441267:1:exon
so has part: feature:6452369-6452440:1:exon
so has part: feature:6455960-6456104:1:exon
so has part: feature:6459891-6460037:1:exon
so has part: feature:6476091-6476238:1:exon
so has part: feature:6478325-6478404:1:exon
so has part: feature:6508434-6508565:1:exon
so has part: feature:6510250-6510398:1:exon
so has part: feature:6535153-6536221:1:exon

position:6412389:1
position: 6412389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6412389-6412635:1:exon

position:6412635:1
position: 6412635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6436605-6437319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6441160-6441267:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6452369-6452440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6455960-6456104:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6459891-6460037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6476091-6476238:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6478325-6478404:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6508434-6508565:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6510250-6510398:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6535153-6536221:1:exon

Slc41a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Slc41a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 41 member 2
translation: MTHSKGRSVTHKTSGSPDTGGGFVDWTLNLNTIQSDKFLNLLLSMVPVIYQKNQEDRHKKANGIWQEGLSGAAQTFSKRSEPHLDYHEFSEQALHGSSGHAPASCSPKYDDYAGYNYCDEREASETTAMLQDEDLSSEGDDVIVETNQKLPRESSGIMALQILVPFLLAGFGTVSAGMVLDVVQHWEVFKNVTEVFILVPALLGLKGNLEMTLASRLSTAVNVGKMDSPIEKWNLIIGNLALKQVQATVVGFLAAVAAIILGWIPEGKYYLSHSILLCSSSVATAFIASLLQGIIMVGVIVGSKKTGINPDNVATPIAASFGDLITLAILAWISQGLYSCLETYYYISPLVCAFFLALTPIWIIIAAKHPATRTVLHSGWEPVITAMVISSIGGLILDTTVSDPNLVGIVVYTPVINGIGGNLVAIQASRISTYLHLHSIPGELPEEPKGCSYPFRTFFGSGVNNKSAQVLLLLVVPGHLIFLYTIHLMKSGHTSLTVIFVVVYLLAAVLQVFTLLWIADWMVHRFWRKGKDPDSFSIPYLTALGDLLGTALLALSFHFLWLIGDHDGDVGD
SIO_010081: Slc41a2
subclass of: SO_0000673
so part of: Slc41a2
location: join(6436768..6437319,6441160..6441267,6452369..6452440,6455960..6456104,6459891..6460037,6476091..6476238,6478325..6478404,6508434..6508565,6510250..6510398,6535153..6535338)
location: region:6436768-6535338:1
so has part: feature:6436768-6437319:1:exon
so has part: feature:6441160-6441267:1:exon
so has part: feature:6452369-6452440:1:exon
so has part: feature:6455960-6456104:1:exon
so has part: feature:6459891-6460037:1:exon
so has part: feature:6476091-6476238:1:exon
so has part: feature:6478325-6478404:1:exon
so has part: feature:6508434-6508565:1:exon
so has part: feature:6510250-6510398:1:exon
so has part: feature:6535153-6535338:1:exon

XP_036025803.1
type: Protein
SIO_000068: ncbiprotein

position:6436768:1
position: 6436768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6535338:1
position: 6535338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6436768-6437319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6441160-6441267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6452369-6452440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6455960-6456104:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6459891-6460037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6476091-6476238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6478325-6478404:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6508434-6508565:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6510250-6510398:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6535153-6535338:1:exon

Slc41a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Slc41a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 41 member 2
translation: MTHSKGRSVTHKTSGSPDTGGGFVDWTLNLNTIQSDKFLNLLLSMVPVIYQKNQEDRHKKANGIWQEGLSGAAQTFSKRSEPHLDYHEFSEQALHGSSGHAPASCSPKYDDYAGYNYCDEREASETTAMLQDEDLSSEGDDVIVETNQKLPRESSGIMALQILVPFLLAGFGTVSAGMVLDVVQHWEVFKNVTEVFILVPALLGLKGNLEMTLASRLSTAVNVGKMDSPIEKWNLIIGNLALKQVQATVVGFLAAVAAIILGWIPEGKYYLSHSILLCSSSVATAFIASLLQGIIMVGVIVGSKKTGINPDNVATPIAASFGDLITLAILAWISQGLYSCLETYYYISPLVCAFFLALTPIWIIIAAKHPATRTVLHSGWEPVITAMVISSIGGLILDTTVSDPNLVGIVVYTPVINGIGGNLVAIQASRISTYLHLHSIPGELPEEPKGCSYPFRTFFGSGVNNKSAQVLLLLVVPGHLIFLYTIHLMKSGHTSLTVIFVVVYLLAAVLQVFTLLWIADWMVHRFWRKGKDPDSFSIPYLTALGDLLGTALLALSFHFLWLIGDHDGDVGD
SIO_010081: Slc41a2
subclass of: SO_0000673
so part of: Slc41a2
location: join(6436768..6437319,6441160..6441267,6452369..6452440,6455960..6456104,6459891..6460037,6476091..6476238,6478325..6478404,6508434..6508565,6510250..6510398,6535153..6535338)
location: region:6436768-6535338:1
so has part: feature:6436768-6437319:1:exon
so has part: feature:6441160-6441267:1:exon
so has part: feature:6452369-6452440:1:exon
so has part: feature:6455960-6456104:1:exon
so has part: feature:6459891-6460037:1:exon
so has part: feature:6476091-6476238:1:exon
so has part: feature:6478325-6478404:1:exon
so has part: feature:6508434-6508565:1:exon
so has part: feature:6510250-6510398:1:exon
so has part: feature:6535153-6535338:1:exon

XP_036025805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6436768-6437319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6441160-6441267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6452369-6452440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6455960-6456104:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6459891-6460037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6476091-6476238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6478325-6478404:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6508434-6508565:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6510250-6510398:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6535153-6535338:1:exon

Chst11
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Chst11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6586143..6800420)
location: region:6586143-6800420:-1
so has part: feature:6586143-6800420:-1:exon
subclass of: SO_0000010

118571055
type: Gene
SIO_000068: ncbigene

position:6586143:-1
position: 6586143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6800420:-1
position: 6800420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6586143-6800420:-1:exon

Chst11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Chst11
product: carbohydrate sulfotransferase 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169944.1
SIO_010081: Chst11
subclass of: SO_0000673
so part of: Chst11
location: complement(join(6586143..6590522,6687877..6687962,6799778..6800420))
location: region:6586143-6800420:-1
so has part: feature:6799778-6800420:-1:exon
so has part: feature:6687877-6687962:-1:exon
so has part: feature:6586143-6590522:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6799778-6800420:-1:exon

position:6799778:-1
position: 6799778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6687877-6687962:-1:exon

position:6687877:-1
position: 6687877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6687962:-1
position: 6687962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6586143-6590522:-1:exon

position:6590522:-1
position: 6590522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Chst11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Chst11
product: carbohydrate sulfotransferase 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169943.1
SIO_010081: Chst11
subclass of: SO_0000673
so part of: Chst11
location: complement(join(6586143..6590522,6687877..6687962,6799763..6800420))
location: region:6586143-6800420:-1
so has part: feature:6799763-6800420:-1:exon
so has part: feature:6687877-6687962:-1:exon
so has part: feature:6586143-6590522:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6799763-6800420:-1:exon

position:6799763:-1
position: 6799763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6687877-6687962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6586143-6590522:-1:exon

Chst11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Chst11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 11 isoform X2
translation: MKPALLEVMRMNRICRMVLATCLGSFILVIFYFQIIRRNPFGMDICCRKGSRSPLQELYNPIQLELSNTAILHQMRRDQVTDTCRANSAMSRKRRVLTPNDLKHLVVDEDHELIYCYVPKVACTNWKRLMMVLSGRGKYSDPMEIPANEAHVSANLKTLNQYSIPEINHRLKSYMKFLFVREPFERLVSAYRNKFTQKYNTSFHKRYGTKIIRRQRKNATQEALRKGDDVKFEEFVAYLIDPHTQREEPFNEHWQTVYSLCHPCHIHYDLVGKYETLEEDSNYVLQLAGVSGYLKFPTYAKSTRTTDEMTTEFFQNISAEHQTQLYEVYKLDFLMFNYSVPNYLKLE
SIO_010081: Chst11
subclass of: SO_0000673
so part of: Chst11
location: complement(join(6589668..6590522,6687877..6687962,6799778..6799880))
location: region:6589668-6799880:-1
so has part: feature:6799778-6799880:-1:exon
so has part: feature:6687877-6687962:-1:exon
so has part: feature:6589668-6590522:-1:exon

XP_036025837.1
type: Protein
SIO_000068: ncbiprotein

position:6589668:-1
position: 6589668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6799880:-1
position: 6799880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6799778-6799880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6687877-6687962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6589668-6590522:-1:exon

Chst11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Chst11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 11 isoform X1
translation: MKPALLEVMRMNRICRMVLATCLGSFILVIFYFQSMLHPVIRRNPFGMDICCRKGSRSPLQELYNPIQLELSNTAILHQMRRDQVTDTCRANSAMSRKRRVLTPNDLKHLVVDEDHELIYCYVPKVACTNWKRLMMVLSGRGKYSDPMEIPANEAHVSANLKTLNQYSIPEINHRLKSYMKFLFVREPFERLVSAYRNKFTQKYNTSFHKRYGTKIIRRQRKNATQEALRKGDDVKFEEFVAYLIDPHTQREEPFNEHWQTVYSLCHPCHIHYDLVGKYETLEEDSNYVLQLAGVSGYLKFPTYAKSTRTTDEMTTEFFQNISAEHQTQLYEVYKLDFLMFNYSVPNYLKLE
SIO_010081: Chst11
subclass of: SO_0000673
so part of: Chst11
location: complement(join(6589668..6590522,6687877..6687962,6799763..6799880))
location: region:6589668-6799880:-1
so has part: feature:6799763-6799880:-1:exon
so has part: feature:6687877-6687962:-1:exon
so has part: feature:6589668-6590522:-1:exon

XP_036025836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6799763-6799880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6687877-6687962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6589668-6590522:-1:exon

LOC118571293
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118571293
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6621028..6621132
location: region:6621028-6621132:1
so has part: feature:6621028-6621132:1:exon
subclass of: SO_0000623

118571293
type: Gene
SIO_000068: ncbigene

position:6621028:1
position: 6621028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6621132:1
position: 6621132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6621028-6621132:1:exon

LOC118571293
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: snRNA
gene: LOC118571293
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004943329.1
SIO_010081: LOC118571293
subclass of: SO_0000673
so part of: LOC118571293
location: 6621028..6621132
location: region:6621028-6621132:1
so has part: feature:6621028-6621132:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6621028-6621132:1:exon

Txnrd1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Txnrd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6879899..6968470)
location: region:6879899-6968470:-1
so has part: feature:6879899-6968470:-1:exon
subclass of: SO_0000010

118570958
type: Gene
SIO_000068: ncbigene

position:6879899:-1
position: 6879899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6968470:-1
position: 6968470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6879899-6968470:-1:exon

Txnrd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Txnrd1
product: thioredoxin reductase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_036169734.1
SIO_010081: Txnrd1
subclass of: SO_0000673
so part of: Txnrd1
location: complement(join(6879899..6881646,6888132..6888266,6889321..6889416,6890125..6890232,6890320..6890476,6890993..6891069,6891570..6891662,6894060..6894285,6896463..6896578,6897318..6897460,6899105..6899224,6900906..6900978,6902304..6902426,6968373..6968470))
location: region:6879899-6968470:-1
so has part: feature:6968373-6968470:-1:exon
so has part: feature:6902304-6902426:-1:exon
so has part: feature:6900906-6900978:-1:exon
so has part: feature:6899105-6899224:-1:exon
so has part: feature:6897318-6897460:-1:exon
so has part: feature:6896463-6896578:-1:exon
so has part: feature:6894060-6894285:-1:exon
so has part: feature:6891570-6891662:-1:exon
so has part: feature:6890993-6891069:-1:exon
so has part: feature:6890320-6890476:-1:exon
so has part: feature:6890125-6890232:-1:exon
so has part: feature:6889321-6889416:-1:exon
so has part: feature:6888132-6888266:-1:exon
so has part: feature:6879899-6881646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6968373-6968470:-1:exon

position:6968373:-1
position: 6968373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6902304-6902426:-1:exon

position:6902304:-1
position: 6902304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6902426:-1
position: 6902426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6900906-6900978:-1:exon

position:6900906:-1
position: 6900906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6900978:-1
position: 6900978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6899105-6899224:-1:exon

position:6899105:-1
position: 6899105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6899224:-1
position: 6899224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6897318-6897460:-1:exon

position:6897318:-1
position: 6897318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6897460:-1
position: 6897460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6896463-6896578:-1:exon

position:6896463:-1
position: 6896463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6896578:-1
position: 6896578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6894060-6894285:-1:exon

position:6894060:-1
position: 6894060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6894285:-1
position: 6894285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6891570-6891662:-1:exon

position:6891570:-1
position: 6891570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6891662:-1
position: 6891662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6890993-6891069:-1:exon

position:6890993:-1
position: 6890993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6891069:-1
position: 6891069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6890320-6890476:-1:exon

position:6890320:-1
position: 6890320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6890476:-1
position: 6890476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6890125-6890232:-1:exon

position:6890125:-1
position: 6890125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6890232:-1
position: 6890232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6889321-6889416:-1:exon

position:6889321:-1
position: 6889321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6889416:-1
position: 6889416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6888132-6888266:-1:exon

position:6888132:-1
position: 6888132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6888266:-1
position: 6888266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6879899-6881646:-1:exon

position:6881646:-1
position: 6881646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Txnrd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Txnrd1
product: thioredoxin reductase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169732.1
SIO_010081: Txnrd1
subclass of: SO_0000673
so part of: Txnrd1
location: complement(join(6879899..6881646,6888132..6888266,6889321..6889416,6890125..6890232,6890320..6890476,6890993..6891069,6891570..6891662,6894060..6894285,6896463..6896578,6897318..6897460,6899105..6899224,6900906..6900978,6902304..6902426,6937387..6937436))
location: region:6879899-6937436:-1
so has part: feature:6937387-6937436:-1:exon
so has part: feature:6902304-6902426:-1:exon
so has part: feature:6900906-6900978:-1:exon
so has part: feature:6899105-6899224:-1:exon
so has part: feature:6897318-6897460:-1:exon
so has part: feature:6896463-6896578:-1:exon
so has part: feature:6894060-6894285:-1:exon
so has part: feature:6891570-6891662:-1:exon
so has part: feature:6890993-6891069:-1:exon
so has part: feature:6890320-6890476:-1:exon
so has part: feature:6890125-6890232:-1:exon
so has part: feature:6889321-6889416:-1:exon
so has part: feature:6888132-6888266:-1:exon
so has part: feature:6879899-6881646:-1:exon

position:6937436:-1
position: 6937436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6937387-6937436:-1:exon

position:6937387:-1
position: 6937387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6902304-6902426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6900906-6900978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6899105-6899224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6897318-6897460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6896463-6896578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6894060-6894285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6891570-6891662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6890993-6891069:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6890320-6890476:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6890125-6890232:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6889321-6889416:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6888132-6888266:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6879899-6881646:-1:exon

Txnrd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Txnrd1
product: thioredoxin reductase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169731.1
SIO_010081: Txnrd1
subclass of: SO_0000673
so part of: Txnrd1
location: complement(join(6879899..6881646,6888132..6888266,6889321..6889416,6890125..6890232,6890320..6890476,6890993..6891069,6891570..6891662,6894060..6894285,6896463..6896578,6897318..6897460,6899105..6899224,6900906..6900978,6902304..6902426,6920855..6921174))
location: region:6879899-6921174:-1
so has part: feature:6920855-6921174:-1:exon
so has part: feature:6902304-6902426:-1:exon
so has part: feature:6900906-6900978:-1:exon
so has part: feature:6899105-6899224:-1:exon
so has part: feature:6897318-6897460:-1:exon
so has part: feature:6896463-6896578:-1:exon
so has part: feature:6894060-6894285:-1:exon
so has part: feature:6891570-6891662:-1:exon
so has part: feature:6890993-6891069:-1:exon
so has part: feature:6890320-6890476:-1:exon
so has part: feature:6890125-6890232:-1:exon
so has part: feature:6889321-6889416:-1:exon
so has part: feature:6888132-6888266:-1:exon
so has part: feature:6879899-6881646:-1:exon

position:6921174:-1
position: 6921174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6920855-6921174:-1:exon

position:6920855:-1
position: 6920855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6902304-6902426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6900906-6900978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6899105-6899224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6897318-6897460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6896463-6896578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6894060-6894285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6891570-6891662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6890993-6891069:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6890320-6890476:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6890125-6890232:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6889321-6889416:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6888132-6888266:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6879899-6881646:-1:exon

Txnrd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Txnrd1
product: thioredoxin reductase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169733.1
SIO_010081: Txnrd1
subclass of: SO_0000673
so part of: Txnrd1
location: complement(join(6879899..6881646,6888132..6888266,6889321..6889416,6890125..6890232,6890320..6890476,6890993..6891069,6891570..6891662,6894060..6894285,6896463..6896578,6897318..6897460,6899105..6899224,6900906..6900978,6902304..6902426,6919594..6919717))
location: region:6879899-6919717:-1
so has part: feature:6919594-6919717:-1:exon
so has part: feature:6902304-6902426:-1:exon
so has part: feature:6900906-6900978:-1:exon
so has part: feature:6899105-6899224:-1:exon
so has part: feature:6897318-6897460:-1:exon
so has part: feature:6896463-6896578:-1:exon
so has part: feature:6894060-6894285:-1:exon
so has part: feature:6891570-6891662:-1:exon
so has part: feature:6890993-6891069:-1:exon
so has part: feature:6890320-6890476:-1:exon
so has part: feature:6890125-6890232:-1:exon
so has part: feature:6889321-6889416:-1:exon
so has part: feature:6888132-6888266:-1:exon
so has part: feature:6879899-6881646:-1:exon

position:6919717:-1
position: 6919717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6919594-6919717:-1:exon

position:6919594:-1
position: 6919594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6902304-6902426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6900906-6900978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6899105-6899224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6897318-6897460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6896463-6896578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6894060-6894285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6891570-6891662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6890993-6891069:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6890320-6890476:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6890125-6890232:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6889321-6889416:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6888132-6888266:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6879899-6881646:-1:exon

Txnrd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Txnrd1
product: thioredoxin reductase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 52 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_036169730.1
SIO_010081: Txnrd1
subclass of: SO_0000673
so part of: Txnrd1
location: complement(join(6879899..6881646,6888132..6888266,6889321..6889416,6890125..6890232,6890320..6890476,6890993..6891069,6891570..6891662,6894060..6894285,6896463..6896578,6897318..6897460,6899105..6899224,6900906..6900978,6902304..6902426,6903921..6904241))
location: region:6879899-6904241:-1
so has part: feature:6903921-6904241:-1:exon
so has part: feature:6902304-6902426:-1:exon
so has part: feature:6900906-6900978:-1:exon
so has part: feature:6899105-6899224:-1:exon
so has part: feature:6897318-6897460:-1:exon
so has part: feature:6896463-6896578:-1:exon
so has part: feature:6894060-6894285:-1:exon
so has part: feature:6891570-6891662:-1:exon
so has part: feature:6890993-6891069:-1:exon
so has part: feature:6890320-6890476:-1:exon
so has part: feature:6890125-6890232:-1:exon
so has part: feature:6889321-6889416:-1:exon
so has part: feature:6888132-6888266:-1:exon
so has part: feature:6879899-6881646:-1:exon

position:6904241:-1
position: 6904241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6903921-6904241:-1:exon

position:6903921:-1
position: 6903921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6902304-6902426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6900906-6900978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6899105-6899224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6897318-6897460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6896463-6896578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6894060-6894285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6891570-6891662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6890993-6891069:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6890320-6890476:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6890125-6890232:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6889321-6889416:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6888132-6888266:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6879899-6881646:-1:exon

Txnrd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Txnrd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin reductase 1, cytoplasmic isoform X1
translation: MPAHECWLCFPASPGRPFVQTVWVAQTCPNCCWFPGFLPPAPRPLCAPRLQLRGTPGAMLPPSHSSTAPPSKSQTPCSTDPRLCPPPSTPDCRQEKNTQSELPHQKGPLETLPTMNGSKEPPRSYDFDLIIIGGGSGGLAAAKEAARFDKKVLVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQNYIGSLNWGYRVALREKKVVYENAYGRFIGPHKIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPVKVEQIEAGTPGRLKVIAQSTTSEETIEDEFNTVLLAVGRDPCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGGSTVKCDYEKVPTTVFTPLEYGCCGLSEEKAIEKFGEENIEVYHSFFWPLEWTVPSRDNNKCYAKIICNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGMTKQQLDSTIGIHPVCAEIFTTLSVTKRSGGDILQSGC
SIO_010081: Txnrd1
subclass of: SO_0000673
so part of: Txnrd1
location: complement(join(6881584..6881646,6888132..6888266,6889321..6889416,6890125..6890232,6890320..6890476,6890993..6891069,6891570..6891662,6894060..6894285,6896463..6896578,6897318..6897460,6899105..6899224,6900906..6900978,6902304..6902426,6903921..6904226))
location: region:6881584-6904226:-1
so has part: feature:6903921-6904226:-1:exon
so has part: feature:6902304-6902426:-1:exon
so has part: feature:6900906-6900978:-1:exon
so has part: feature:6899105-6899224:-1:exon
so has part: feature:6897318-6897460:-1:exon
so has part: feature:6896463-6896578:-1:exon
so has part: feature:6894060-6894285:-1:exon
so has part: feature:6891570-6891662:-1:exon
so has part: feature:6890993-6891069:-1:exon
so has part: feature:6890320-6890476:-1:exon
so has part: feature:6890125-6890232:-1:exon
so has part: feature:6889321-6889416:-1:exon
so has part: feature:6888132-6888266:-1:exon
so has part: feature:6881584-6881646:-1:exon

XP_036025623.1
type: Protein
SIO_000068: ncbiprotein

position:6881584:-1
position: 6881584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6904226:-1
position: 6904226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6903921-6904226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6902304-6902426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6900906-6900978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6899105-6899224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6897318-6897460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6896463-6896578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6894060-6894285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6891570-6891662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6890993-6891069:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6890320-6890476:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6890125-6890232:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6889321-6889416:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6888132-6888266:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6881584-6881646:-1:exon

Txnrd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Txnrd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin reductase 1, cytoplasmic isoform X2
translation: MNGSKEPPRSYDFDLIIIGGGSGGLAAAKEAARFDKKVLVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQNYIGSLNWGYRVALREKKVVYENAYGRFIGPHKIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPVKVEQIEAGTPGRLKVIAQSTTSEETIEDEFNTVLLAVGRDPCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGGSTVKCDYEKVPTTVFTPLEYGCCGLSEEKAIEKFGEENIEVYHSFFWPLEWTVPSRDNNKCYAKIICNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGMTKQQLDSTIGIHPVCAEIFTTLSVTKRSGGDILQSGC
SIO_010081: Txnrd1
subclass of: SO_0000673
so part of: Txnrd1
location: complement(join(6881584..6881646,6888132..6888266,6889321..6889416,6890125..6890232,6890320..6890476,6890993..6891069,6891570..6891662,6894060..6894285,6896463..6896578,6897318..6897460,6899105..6899224,6900906..6900978,6902304..6902390))
location: region:6881584-6902390:-1
so has part: feature:6902304-6902390:-1:exon
so has part: feature:6900906-6900978:-1:exon
so has part: feature:6899105-6899224:-1:exon
so has part: feature:6897318-6897460:-1:exon
so has part: feature:6896463-6896578:-1:exon
so has part: feature:6894060-6894285:-1:exon
so has part: feature:6891570-6891662:-1:exon
so has part: feature:6890993-6891069:-1:exon
so has part: feature:6890320-6890476:-1:exon
so has part: feature:6890125-6890232:-1:exon
so has part: feature:6889321-6889416:-1:exon
so has part: feature:6888132-6888266:-1:exon
so has part: feature:6881584-6881646:-1:exon

XP_036025624.1
type: Protein
SIO_000068: ncbiprotein

position:6902390:-1
position: 6902390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6902304-6902390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6900906-6900978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6899105-6899224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6897318-6897460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6896463-6896578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6894060-6894285:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6891570-6891662:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6890993-6891069:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6890320-6890476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6890125-6890232:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6889321-6889416:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6888132-6888266:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6881584-6881646:-1:exon

Txnrd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Txnrd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin reductase 1, cytoplasmic isoform X2
translation: MNGSKEPPRSYDFDLIIIGGGSGGLAAAKEAARFDKKVLVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQNYIGSLNWGYRVALREKKVVYENAYGRFIGPHKIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPVKVEQIEAGTPGRLKVIAQSTTSEETIEDEFNTVLLAVGRDPCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGGSTVKCDYEKVPTTVFTPLEYGCCGLSEEKAIEKFGEENIEVYHSFFWPLEWTVPSRDNNKCYAKIICNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGMTKQQLDSTIGIHPVCAEIFTTLSVTKRSGGDILQSGC
SIO_010081: Txnrd1
subclass of: SO_0000673
so part of: Txnrd1
location: complement(join(6881584..6881646,6888132..6888266,6889321..6889416,6890125..6890232,6890320..6890476,6890993..6891069,6891570..6891662,6894060..6894285,6896463..6896578,6897318..6897460,6899105..6899224,6900906..6900978,6902304..6902390))
location: region:6881584-6902390:-1
so has part: feature:6902304-6902390:-1:exon
so has part: feature:6900906-6900978:-1:exon
so has part: feature:6899105-6899224:-1:exon
so has part: feature:6897318-6897460:-1:exon
so has part: feature:6896463-6896578:-1:exon
so has part: feature:6894060-6894285:-1:exon
so has part: feature:6891570-6891662:-1:exon
so has part: feature:6890993-6891069:-1:exon
so has part: feature:6890320-6890476:-1:exon
so has part: feature:6890125-6890232:-1:exon
so has part: feature:6889321-6889416:-1:exon
so has part: feature:6888132-6888266:-1:exon
so has part: feature:6881584-6881646:-1:exon

XP_036025625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6902304-6902390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6900906-6900978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6899105-6899224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6897318-6897460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6896463-6896578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6894060-6894285:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6891570-6891662:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6890993-6891069:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6890320-6890476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6890125-6890232:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6889321-6889416:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6888132-6888266:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6881584-6881646:-1:exon

Txnrd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Txnrd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin reductase 1, cytoplasmic isoform X2
translation: MNGSKEPPRSYDFDLIIIGGGSGGLAAAKEAARFDKKVLVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQNYIGSLNWGYRVALREKKVVYENAYGRFIGPHKIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPVKVEQIEAGTPGRLKVIAQSTTSEETIEDEFNTVLLAVGRDPCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGGSTVKCDYEKVPTTVFTPLEYGCCGLSEEKAIEKFGEENIEVYHSFFWPLEWTVPSRDNNKCYAKIICNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGMTKQQLDSTIGIHPVCAEIFTTLSVTKRSGGDILQSGC
SIO_010081: Txnrd1
subclass of: SO_0000673
so part of: Txnrd1
location: complement(join(6881584..6881646,6888132..6888266,6889321..6889416,6890125..6890232,6890320..6890476,6890993..6891069,6891570..6891662,6894060..6894285,6896463..6896578,6897318..6897460,6899105..6899224,6900906..6900978,6902304..6902390))
location: region:6881584-6902390:-1
so has part: feature:6902304-6902390:-1:exon
so has part: feature:6900906-6900978:-1:exon
so has part: feature:6899105-6899224:-1:exon
so has part: feature:6897318-6897460:-1:exon
so has part: feature:6896463-6896578:-1:exon
so has part: feature:6894060-6894285:-1:exon
so has part: feature:6891570-6891662:-1:exon
so has part: feature:6890993-6891069:-1:exon
so has part: feature:6890320-6890476:-1:exon
so has part: feature:6890125-6890232:-1:exon
so has part: feature:6889321-6889416:-1:exon
so has part: feature:6888132-6888266:-1:exon
so has part: feature:6881584-6881646:-1:exon

XP_036025626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6902304-6902390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6900906-6900978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6899105-6899224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6897318-6897460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6896463-6896578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6894060-6894285:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6891570-6891662:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6890993-6891069:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6890320-6890476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6890125-6890232:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6889321-6889416:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6888132-6888266:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6881584-6881646:-1:exon

Txnrd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Txnrd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin reductase 1, cytoplasmic isoform X2
translation: MNGSKEPPRSYDFDLIIIGGGSGGLAAAKEAARFDKKVLVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQNYIGSLNWGYRVALREKKVVYENAYGRFIGPHKIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPVKVEQIEAGTPGRLKVIAQSTTSEETIEDEFNTVLLAVGRDPCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGGSTVKCDYEKVPTTVFTPLEYGCCGLSEEKAIEKFGEENIEVYHSFFWPLEWTVPSRDNNKCYAKIICNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGMTKQQLDSTIGIHPVCAEIFTTLSVTKRSGGDILQSGC
SIO_010081: Txnrd1
subclass of: SO_0000673
so part of: Txnrd1
location: complement(join(6881584..6881646,6888132..6888266,6889321..6889416,6890125..6890232,6890320..6890476,6890993..6891069,6891570..6891662,6894060..6894285,6896463..6896578,6897318..6897460,6899105..6899224,6900906..6900978,6902304..6902390))
location: region:6881584-6902390:-1
so has part: feature:6902304-6902390:-1:exon
so has part: feature:6900906-6900978:-1:exon
so has part: feature:6899105-6899224:-1:exon
so has part: feature:6897318-6897460:-1:exon
so has part: feature:6896463-6896578:-1:exon
so has part: feature:6894060-6894285:-1:exon
so has part: feature:6891570-6891662:-1:exon
so has part: feature:6890993-6891069:-1:exon
so has part: feature:6890320-6890476:-1:exon
so has part: feature:6890125-6890232:-1:exon
so has part: feature:6889321-6889416:-1:exon
so has part: feature:6888132-6888266:-1:exon
so has part: feature:6881584-6881646:-1:exon

XP_036025627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6902304-6902390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6900906-6900978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6899105-6899224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6897318-6897460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6896463-6896578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6894060-6894285:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6891570-6891662:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6890993-6891069:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6890320-6890476:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6890125-6890232:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6889321-6889416:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6888132-6888266:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6881584-6881646:-1:exon

Eid3
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Eid3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6909881..6911145)
location: region:6909881-6911145:-1
so has part: feature:6909881-6911145:-1:exon
subclass of: SO_0000010

118570959
type: Gene
SIO_000068: ncbigene

position:6909881:-1
position: 6909881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6911145:-1
position: 6911145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6909881-6911145:-1:exon

Eid3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Eid3
product: EP300 interacting inhibitor of differentiation 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036169736.1
SIO_010081: Eid3
subclass of: SO_0000673
so part of: Eid3
location: complement(6909881..6911145)
location: region:6909881-6911145:-1
so has part: feature:6909881-6911145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6909881-6911145:-1:exon

Eid3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Eid3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EP300-interacting inhibitor of differentiation 3
translation: MGRRPRLQRSPVATAVAAAAPESCSLPATTMSKEKGEELVGSLGWRCLVKQGEEEAEALKKEEEEEEDCCSDDLSPEAPGVHPDLLELAVDREKCRSIRRQYRQLIYTVQQNREDIVNTASDSLTEALEEANVLFDGVSRTREAALDAQFLVLASDLGKEKAKQLNSDMSFFNHAAFCDLLLVFVGLSWVEDQCEELSDCDDSVALSLWGTVQKEAAACMLRAETFHFIFGSFKAERRARKPRLEQHKRACKMEGNGDMPTKLRKLDAHANQETTEKEVERILGLLQTYFQKYPDTPVSYFEFVIDPNSFSRTVENIFYVSFIIRDGFARIRLDQDRLPILEPTNVNQADEESDSCSYGRKQGVISLSLQDWKNIVSTFEISEAMIKNSY
SIO_010081: Eid3
subclass of: SO_0000673
so part of: Eid3
location: complement(6909971..6911143)
location: region:6909971-6911143:-1
so has part: feature:6909971-6911143:-1:exon

XP_036025629.1
type: Protein
SIO_000068: ncbiprotein

position:6909971:-1
position: 6909971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6911143:-1
position: 6911143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6909971-6911143:-1:exon

LOC118571262
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118571262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6911142..6919865
location: region:6911142-6919865:1
so has part: feature:6911142-6919865:1:exon
subclass of: SO_0000010

118571262
type: Gene
SIO_000068: ncbigene

position:6911142:1
position: 6911142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6919865:1
position: 6919865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6911142-6919865:1:exon

LOC118571262
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118571262
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_036170219.1
SIO_010081: LOC118571262
subclass of: SO_0000673
so part of: LOC118571262
location: join(6911142..6911341,6919424..6919865)
location: region:6911142-6919865:1
so has part: feature:6911142-6911341:1:exon
so has part: feature:6919424-6919865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6911142-6911341:1:exon

position:6911341:1
position: 6911341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6919424-6919865:1:exon

position:6919424:1
position: 6919424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118571262
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118571262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MRKRPRPQPGPRPRPRPVRDHAPGPGPAAGRPGGGPGPSVTTPPARPRPRPRPRPRPRPRPRCGAAGRSRRCRLKERKPEPRALRTARLPGSGIGARGSAAGRARGWGPGAGTRGRGWGVRALPSGLDHSSPPPASPSAFRRLPRPLPAQLDPPPQAPPPSVAQSREAVSLLRAGLPGRHPPSATPALGHSRRVDSDPPAARSQNPAPKGGQL
SIO_010081: LOC118571262
subclass of: SO_0000673
so part of: LOC118571262
location: join(6911142..6911341,6919424..6919865)
location: region:6911142-6919865:1
so has part: feature:6911142-6911341:1:exon
so has part: feature:6919424-6919865:1:exon

XP_036026112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6911142-6911341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6919424-6919865:1:exon

Nfyb
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Nfyb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7021778..7038338
location: region:7021778-7038338:1
so has part: feature:7021778-7038338:1:exon
subclass of: SO_0000010

118571197
type: Gene
SIO_000068: ncbigene

position:7021778:1
position: 7021778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7038338:1
position: 7038338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7021778-7038338:1:exon

Nfyb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Nfyb
product: nuclear transcription factor Y subunit beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036170150.1
SIO_010081: Nfyb
subclass of: SO_0000673
so part of: Nfyb
location: join(7021778..7021923,7024708..7024791,7029774..7029867,7034434..7034631,7035591..7035672,7036250..7036329,7036598..7038338)
location: region:7021778-7038338:1
so has part: feature:7021778-7021923:1:exon
so has part: feature:7024708-7024791:1:exon
so has part: feature:7029774-7029867:1:exon
so has part: feature:7034434-7034631:1:exon
so has part: feature:7035591-7035672:1:exon
so has part: feature:7036250-7036329:1:exon
so has part: feature:7036598-7038338:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7021778-7021923:1:exon

position:7021923:1
position: 7021923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7024708-7024791:1:exon

position:7024708:1
position: 7024708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7024791:1
position: 7024791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7029774-7029867:1:exon

position:7029774:1
position: 7029774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7029867:1
position: 7029867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7034434-7034631:1:exon

position:7034434:1
position: 7034434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7034631:1
position: 7034631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7035591-7035672:1:exon

position:7035591:1
position: 7035591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7035672:1
position: 7035672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7036250-7036329:1:exon

position:7036250:1
position: 7036250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7036329:1
position: 7036329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7036598-7038338:1:exon

position:7036598:1
position: 7036598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nfyb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Nfyb
product: nuclear transcription factor Y subunit beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036170149.1
SIO_010081: Nfyb
subclass of: SO_0000673
so part of: Nfyb
location: join(7021953..7022488,7024708..7024778,7029774..7029867,7031599..7031673)
location: region:7021953-7031673:1
so has part: feature:7021953-7022488:1:exon
so has part: feature:7024708-7024778:1:exon
so has part: feature:7029774-7029867:1:exon
so has part: feature:7031599-7031673:1:exon

position:7021953:1
position: 7021953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7031673:1
position: 7031673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7021953-7022488:1:exon

position:7022488:1
position: 7022488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7024708-7024778:1:exon

position:7024778:1
position: 7024778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7029774-7029867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7031599-7031673:1:exon

position:7031599:1
position: 7031599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nfyb
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 38674
gene: Nfyb
product: nuclear transcription factor Y subunit beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004943297.1
SIO_010081: Nfyb
so part of: Nfyb
location: join(7021954..7022488,7024708..7024791,7029774..7029867,7031599..7031673)
location: region:7021954-7031673:1
so has part: feature:7021954-7022488:1:exon
so has part: feature:7024708-7024791:1:exon
so has part: feature:7029774-7029867:1:exon
so has part: feature:7031599-7031673:1:exon

position:7021954:1
position: 7021954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7021954-7022488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7024708-7024791:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7029774-7029867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7031599-7031673:1:exon

Nfyb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Nfyb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit beta isoform X1
translation: MKCPSPPGAVPAANAAAVGGTLRPQPSGGPGLQARPPCFGPGRARGGGRFVHGAASSAELGRAAAGLSRRQPPGRLHFVRGAGGGRAGGESGPACAAPRSGRFVSRIPAAAAAGVGRGRRGMRSAGPPRHLQAEVAGPPRGTSGLAAPGSLCASSMQPSGGWRTPDLPRRLRLGKDPIPFDECLRTPLIHNSEDGWRQFNHRCFSTRDLRRLHWRKSLCHPASR
SIO_010081: Nfyb
subclass of: SO_0000673
so part of: Nfyb
location: join(7021980..7022488,7024708..7024778,7029774..7029867,7031599)
location: region:7021980-7031599:1
so has part: feature:7021980-7022488:1:exon
so has part: feature:7024708-7024778:1:exon
so has part: feature:7029774-7029867:1:exon
so has part: feature:7031599-7031599:1:exon

XP_036026042.1
type: Protein
SIO_000068: ncbiprotein

position:7021980:1
position: 7021980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7021980-7022488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7024708-7024778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7029774-7029867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7031599-7031599:1:exon

Hcfc2
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Hcfc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7028564..7088618)
location: region:7028564-7088618:-1
so has part: feature:7028564-7088618:-1:exon
subclass of: SO_0000010

118571196
type: Gene
SIO_000068: ncbigene

position:7028564:-1
position: 7028564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7088618:-1
position: 7088618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7028564-7088618:-1:exon

Hcfc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Hcfc2
product: host cell factor C2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_036170147.1
SIO_010081: Hcfc2
subclass of: SO_0000673
so part of: Hcfc2
location: complement(join(7028564..7028667,7056619..7056904,7057848..7058033,7059942..7060076,7061895..7061968,7066690..7066864,7070948..7071000,7071513..7071680,7079343..7079531,7079630..7079736,7081476..7081560,7082263..7082471,7085452..7085612,7086954..7087102,7088327..7088618))
location: region:7028564-7088618:-1
so has part: feature:7088327-7088618:-1:exon
so has part: feature:7086954-7087102:-1:exon
so has part: feature:7085452-7085612:-1:exon
so has part: feature:7082263-7082471:-1:exon
so has part: feature:7081476-7081560:-1:exon
so has part: feature:7079630-7079736:-1:exon
so has part: feature:7079343-7079531:-1:exon
so has part: feature:7071513-7071680:-1:exon
so has part: feature:7070948-7071000:-1:exon
so has part: feature:7066690-7066864:-1:exon
so has part: feature:7061895-7061968:-1:exon
so has part: feature:7059942-7060076:-1:exon
so has part: feature:7057848-7058033:-1:exon
so has part: feature:7056619-7056904:-1:exon
so has part: feature:7028564-7028667:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7088327-7088618:-1:exon

position:7088327:-1
position: 7088327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7086954-7087102:-1:exon

position:7086954:-1
position: 7086954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7087102:-1
position: 7087102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7085452-7085612:-1:exon

position:7085452:-1
position: 7085452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7085612:-1
position: 7085612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7082263-7082471:-1:exon

position:7082263:-1
position: 7082263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7082471:-1
position: 7082471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7081476-7081560:-1:exon

position:7081476:-1
position: 7081476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7081560:-1
position: 7081560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7079630-7079736:-1:exon

position:7079630:-1
position: 7079630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7079736:-1
position: 7079736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7079343-7079531:-1:exon

position:7079343:-1
position: 7079343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7079531:-1
position: 7079531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7071513-7071680:-1:exon

position:7071513:-1
position: 7071513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7071680:-1
position: 7071680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7070948-7071000:-1:exon

position:7070948:-1
position: 7070948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7071000:-1
position: 7071000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7066690-7066864:-1:exon

position:7066690:-1
position: 7066690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7066864:-1
position: 7066864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7061895-7061968:-1:exon

position:7061895:-1
position: 7061895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7061968:-1
position: 7061968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7059942-7060076:-1:exon

position:7059942:-1
position: 7059942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7060076:-1
position: 7060076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7057848-7058033:-1:exon

position:7057848:-1
position: 7057848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7058033:-1
position: 7058033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7056619-7056904:-1:exon

position:7056619:-1
position: 7056619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7056904:-1
position: 7056904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7028564-7028667:-1:exon

position:7028667:-1
position: 7028667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hcfc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Hcfc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: host cell factor 2 isoform X1
translation: MAAPSLLNWRRVSSFTGPVPRARHGHRAVAIRELMIIFGGGNEGIADELHVYNTVTNQWFLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQASRWLWKKVKPQPPPSGSPPCPRLGHSFSLYGNRCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIPATKGIVPSPRESHTAIIYCKKDSGRPRMYVFGGMCGARLDDLWQLDLETMSWSQPETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTENSPHDCEWRCTSSFSYLNLDTAEWTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDGYKKALNSQVCCKDLWYLDTEKPPAPSQVQLIKATTNSFHVKWDEVPTVEGYLLQLNTDLPYQAASPDSSAAPNMLGGRMDPHRQGSNSILHNSVSDTVNSAKTEHTAMKGTAVRNKPDFRATDSNAALHSPLAPNASNNNSCVTDMLWKNEVDEICALPATKISRVEVHASATPFSKETPSNPVAILKTEQQWCDVGIFKNNTALVSQFYLLPKGKQSMSKVGNADVPDYSLLKKQDLVPGTVYKFRVAAINGCGIGPFSKISEFKTCIPGFPGAPSTVRISKNVEGIHLSWEPPTSPSGNILEYSAYLAIRTAQVQDNPSQLVFMRIYCGLKTSCIVTSGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQVRWLQADLEGLARGHGAASATGQAQKGDSVYLAD
SIO_010081: Hcfc2
subclass of: SO_0000673
so part of: Hcfc2
location: complement(join(7028579..7028667,7056619..7056904,7057848..7058033,7059942..7060076,7061895..7061968,7066690..7066864,7070948..7071000,7071513..7071680,7079343..7079531,7079630..7079736,7081476..7081560,7082263..7082471,7085452..7085612,7086954..7087102,7088327..7088489))
location: region:7028579-7088489:-1
so has part: feature:7088327-7088489:-1:exon
so has part: feature:7086954-7087102:-1:exon
so has part: feature:7085452-7085612:-1:exon
so has part: feature:7082263-7082471:-1:exon
so has part: feature:7081476-7081560:-1:exon
so has part: feature:7079630-7079736:-1:exon
so has part: feature:7079343-7079531:-1:exon
so has part: feature:7071513-7071680:-1:exon
so has part: feature:7070948-7071000:-1:exon
so has part: feature:7066690-7066864:-1:exon
so has part: feature:7061895-7061968:-1:exon
so has part: feature:7059942-7060076:-1:exon
so has part: feature:7057848-7058033:-1:exon
so has part: feature:7056619-7056904:-1:exon
so has part: feature:7028579-7028667:-1:exon

XP_036026040.1
type: Protein
SIO_000068: ncbiprotein

position:7028579:-1
position: 7028579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7088489:-1
position: 7088489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7088327-7088489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7086954-7087102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7085452-7085612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7082263-7082471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7081476-7081560:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7079630-7079736:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7079343-7079531:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7071513-7071680:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7070948-7071000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7066690-7066864:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7061895-7061968:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7059942-7060076:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7057848-7058033:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7056619-7056904:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7028579-7028667:-1:exon

Nfyb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Nfyb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transcription factor Y subunit beta isoform X2
translation: MSSSLTMIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVSATDGLSEELTEEAFTNQLPAGLITADGQQQNVMVYTTSYQQISGVQQIQFS
SIO_010081: Nfyb
subclass of: SO_0000673
so part of: Nfyb
location: join(7029847..7029867,7034434..7034631,7035591..7035672,7036250..7036329,7036598..7036630)
location: region:7029847-7036630:1
so has part: feature:7029847-7029867:1:exon
so has part: feature:7034434-7034631:1:exon
so has part: feature:7035591-7035672:1:exon
so has part: feature:7036250-7036329:1:exon
so has part: feature:7036598-7036630:1:exon

XP_036026043.1
type: Protein
SIO_000068: ncbiprotein

position:7029847:1
position: 7029847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7036630:1
position: 7036630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7029847-7029867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7034434-7034631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7035591-7035672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7036250-7036329:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7036598-7036630:1:exon

LOC118571283
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118571283
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7030404..7030508
location: region:7030404-7030508:1
so has part: feature:7030404-7030508:1:exon
subclass of: SO_0000623

118571283
type: Gene
SIO_000068: ncbigene

position:7030404:1
position: 7030404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7030508:1
position: 7030508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7030404-7030508:1:exon

LOC118571283
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: snRNA
gene: LOC118571283
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004943321.1
SIO_010081: LOC118571283
subclass of: SO_0000673
so part of: LOC118571283
location: 7030404..7030508
location: region:7030404-7030508:1
so has part: feature:7030404-7030508:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7030404-7030508:1:exon

Hcfc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Hcfc2
product: host cell factor C2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_036170148.1
SIO_010081: Hcfc2
subclass of: SO_0000673
so part of: Hcfc2
location: complement(join(7053148..7056445,7056619..7056904,7057848..7058033,7059942..7060076,7061895..7061968,7066690..7066864,7070948..7071000,7071513..7071680,7079343..7079531,7079630..7079736,7081476..7081560,7082263..7082471,7085452..7085612,7086954..7087102,7088327..7088618))
location: region:7053148-7088618:-1
so has part: feature:7088327-7088618:-1:exon
so has part: feature:7086954-7087102:-1:exon
so has part: feature:7085452-7085612:-1:exon
so has part: feature:7082263-7082471:-1:exon
so has part: feature:7081476-7081560:-1:exon
so has part: feature:7079630-7079736:-1:exon
so has part: feature:7079343-7079531:-1:exon
so has part: feature:7071513-7071680:-1:exon
so has part: feature:7070948-7071000:-1:exon
so has part: feature:7066690-7066864:-1:exon
so has part: feature:7061895-7061968:-1:exon
so has part: feature:7059942-7060076:-1:exon
so has part: feature:7057848-7058033:-1:exon
so has part: feature:7056619-7056904:-1:exon
so has part: feature:7053148-7056445:-1:exon

position:7053148:-1
position: 7053148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7088327-7088618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7086954-7087102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7085452-7085612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7082263-7082471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7081476-7081560:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7079630-7079736:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7079343-7079531:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7071513-7071680:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7070948-7071000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7066690-7066864:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7061895-7061968:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7059942-7060076:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7057848-7058033:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7056619-7056904:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7053148-7056445:-1:exon

position:7056445:-1
position: 7056445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hcfc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Hcfc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: host cell factor 2 isoform X2
translation: MAAPSLLNWRRVSSFTGPVPRARHGHRAVAIRELMIIFGGGNEGIADELHVYNTVTNQWFLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQASRWLWKKVKPQPPPSGSPPCPRLGHSFSLYGNRCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIPATKGIVPSPRESHTAIIYCKKDSGRPRMYVFGGMCGARLDDLWQLDLETMSWSQPETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTENSPHDCEWRCTSSFSYLNLDTAEWTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDGYKKALNSQVCCKDLWYLDTEKPPAPSQVQLIKATTNSFHVKWDEVPTVEGYLLQLNTDLPYQAASPDSSAAPNMLGGRMDPHRQGSNSILHNSVSDTVNSAKTEHTAMKGTAVRNKPDFRATDSNAALHSPLAPNASNNNSCVTDMLWKNEVDEICALPATKISRVEVHASATPFSKETPSNPVAILKTEQQWCDVGIFKNNTALVSQFYLLPKGKQSMSKVGNADVPDYSLLKKQDLVPGTVYKFRVAAINGCGIGPFSKISEFKTCIPGFPGAPSTVRISKNVEGIHLSWEPPTSPSGNILEYSAYLAIRTAQVQDNPSQLVFMRIYCGLKTSCIVTSGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQVRWLQDPNKK
SIO_010081: Hcfc2
subclass of: SO_0000673
so part of: Hcfc2
location: complement(join(7056429..7056445,7056619..7056904,7057848..7058033,7059942..7060076,7061895..7061968,7066690..7066864,7070948..7071000,7071513..7071680,7079343..7079531,7079630..7079736,7081476..7081560,7082263..7082471,7085452..7085612,7086954..7087102,7088327..7088489))
location: region:7056429-7088489:-1
so has part: feature:7088327-7088489:-1:exon
so has part: feature:7086954-7087102:-1:exon
so has part: feature:7085452-7085612:-1:exon
so has part: feature:7082263-7082471:-1:exon
so has part: feature:7081476-7081560:-1:exon
so has part: feature:7079630-7079736:-1:exon
so has part: feature:7079343-7079531:-1:exon
so has part: feature:7071513-7071680:-1:exon
so has part: feature:7070948-7071000:-1:exon
so has part: feature:7066690-7066864:-1:exon
so has part: feature:7061895-7061968:-1:exon
so has part: feature:7059942-7060076:-1:exon
so has part: feature:7057848-7058033:-1:exon
so has part: feature:7056619-7056904:-1:exon
so has part: feature:7056429-7056445:-1:exon

XP_036026041.1
type: Protein
SIO_000068: ncbiprotein

position:7056429:-1
position: 7056429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7088327-7088489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7086954-7087102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7085452-7085612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7082263-7082471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7081476-7081560:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7079630-7079736:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7079343-7079531:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7071513-7071680:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7070948-7071000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7066690-7066864:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7061895-7061968:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7059942-7060076:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7057848-7058033:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7056619-7056904:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7056429-7056445:-1:exon

Glt8d2
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Glt8d2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7099982..7142832
location: region:7099982-7142832:1
so has part: feature:7099982-7142832:1:exon
subclass of: SO_0000010

118571029
type: Gene
SIO_000068: ncbigene

position:7099982:1
position: 7099982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7142832:1
position: 7142832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7099982-7142832:1:exon

Glt8d2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Glt8d2
product: glycosyltransferase 8 domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_036169903.1
SIO_010081: Glt8d2
subclass of: SO_0000673
so part of: Glt8d2
location: join(7099982..7100375,7126139..7126192,7128733..7128825,7131732..7131903,7134043..7134160,7136331..7136415,7136969..7137081,7138487..7138653,7140489..7140601,7142185..7142832)
location: region:7099982-7142832:1
so has part: feature:7099982-7100375:1:exon
so has part: feature:7126139-7126192:1:exon
so has part: feature:7128733-7128825:1:exon
so has part: feature:7131732-7131903:1:exon
so has part: feature:7134043-7134160:1:exon
so has part: feature:7136331-7136415:1:exon
so has part: feature:7136969-7137081:1:exon
so has part: feature:7138487-7138653:1:exon
so has part: feature:7140489-7140601:1:exon
so has part: feature:7142185-7142832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7099982-7100375:1:exon

position:7100375:1
position: 7100375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7126139-7126192:1:exon

position:7126139:1
position: 7126139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7126192:1
position: 7126192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7128733-7128825:1:exon

position:7128733:1
position: 7128733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7128825:1
position: 7128825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7131732-7131903:1:exon

position:7131732:1
position: 7131732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7131903:1
position: 7131903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7134043-7134160:1:exon

position:7134043:1
position: 7134043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7134160:1
position: 7134160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7136331-7136415:1:exon

position:7136331:1
position: 7136331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7136415:1
position: 7136415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7136969-7137081:1:exon

position:7136969:1
position: 7136969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7137081:1
position: 7137081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7138487-7138653:1:exon

position:7138487:1
position: 7138487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7138653:1
position: 7138653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7140489-7140601:1:exon

position:7140489:1
position: 7140489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7140601:1
position: 7140601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7142185-7142832:1:exon

position:7142185:1
position: 7142185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Glt8d2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Glt8d2
product: glycosyltransferase 8 domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036169904.1
SIO_010081: Glt8d2
subclass of: SO_0000673
so part of: Glt8d2
location: join(7099982..7100183,7126139..7126192,7128733..7128825,7131732..7131903,7134043..7134160,7136331..7136415,7136969..7137081,7138487..7138653,7140489..7140601,7142185..7142832)
location: region:7099982-7142832:1
so has part: feature:7099982-7100183:1:exon
so has part: feature:7126139-7126192:1:exon
so has part: feature:7128733-7128825:1:exon
so has part: feature:7131732-7131903:1:exon
so has part: feature:7134043-7134160:1:exon
so has part: feature:7136331-7136415:1:exon
so has part: feature:7136969-7137081:1:exon
so has part: feature:7138487-7138653:1:exon
so has part: feature:7140489-7140601:1:exon
so has part: feature:7142185-7142832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7099982-7100183:1:exon

position:7100183:1
position: 7100183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7126139-7126192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7128733-7128825:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7131732-7131903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7134043-7134160:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7136331-7136415:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7136969-7137081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7138487-7138653:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7140489-7140601:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7142185-7142832:1:exon

Glt8d2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Glt8d2
product: glycosyltransferase 8 domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036169905.1
SIO_010081: Glt8d2
subclass of: SO_0000673
so part of: Glt8d2
location: join(7107367..7107423,7126139..7126192,7128733..7128825,7131732..7131903,7134043..7134160,7136331..7136415,7136969..7137081,7138487..7138653,7140489..7140601,7142185..7142832)
location: region:7107367-7142832:1
so has part: feature:7107367-7107423:1:exon
so has part: feature:7126139-7126192:1:exon
so has part: feature:7128733-7128825:1:exon
so has part: feature:7131732-7131903:1:exon
so has part: feature:7134043-7134160:1:exon
so has part: feature:7136331-7136415:1:exon
so has part: feature:7136969-7137081:1:exon
so has part: feature:7138487-7138653:1:exon
so has part: feature:7140489-7140601:1:exon
so has part: feature:7142185-7142832:1:exon

position:7107367:1
position: 7107367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7107367-7107423:1:exon

position:7107423:1
position: 7107423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7126139-7126192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7128733-7128825:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7131732-7131903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7134043-7134160:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7136331-7136415:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7136969-7137081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7138487-7138653:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7140489-7140601:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7142185-7142832:1:exon

Glt8d2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Glt8d2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycosyltransferase 8 domain-containing protein 2
translation: MHMALLRKINQVLLFLLALTLCGILYKKVHKGAVLKNEADDDSESPEDMEEEIPVVICAAPGRMGAAMAAINSIYSNTEANIVFYVVGLRNTLSRIRKWIEHSKLREINFRVVEFNPVVLKGKIRPDSSRPELLQPLNFVRFYLPLLIHQHEKVIYLDDDVIVQGDIQELYDTTLALGHAAAFSDDCDLPSAQDNNRIVGLQNTYMGYLDYRKKTIKDLGISPSTCSFNPGVIVANMTEWKHQRITKQLEKWMQKNVEENLYSSSLGGGVATSPMLIVFHGKYSTINPLWHIRHLGWNPDVRYSEHFLQEAKLLHWNGRHKPWDFPSVHNNLWESWFVPDPAGIFKLHHNR
SIO_010081: Glt8d2
subclass of: SO_0000673
so part of: Glt8d2
location: join(7126168..7126192,7128733..7128825,7131732..7131903,7134043..7134160,7136331..7136415,7136969..7137081,7138487..7138653,7140489..7140601,7142185..7142354)
location: region:7126168-7142354:1
so has part: feature:7126168-7126192:1:exon
so has part: feature:7128733-7128825:1:exon
so has part: feature:7131732-7131903:1:exon
so has part: feature:7134043-7134160:1:exon
so has part: feature:7136331-7136415:1:exon
so has part: feature:7136969-7137081:1:exon
so has part: feature:7138487-7138653:1:exon
so has part: feature:7140489-7140601:1:exon
so has part: feature:7142185-7142354:1:exon

XP_036025796.1
type: Protein
SIO_000068: ncbiprotein

position:7126168:1
position: 7126168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7142354:1
position: 7142354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7126168-7126192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7128733-7128825:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7131732-7131903:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7134043-7134160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7136331-7136415:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7136969-7137081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7138487-7138653:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7140489-7140601:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7142185-7142354:1:exon

Glt8d2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Glt8d2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycosyltransferase 8 domain-containing protein 2
translation: MHMALLRKINQVLLFLLALTLCGILYKKVHKGAVLKNEADDDSESPEDMEEEIPVVICAAPGRMGAAMAAINSIYSNTEANIVFYVVGLRNTLSRIRKWIEHSKLREINFRVVEFNPVVLKGKIRPDSSRPELLQPLNFVRFYLPLLIHQHEKVIYLDDDVIVQGDIQELYDTTLALGHAAAFSDDCDLPSAQDNNRIVGLQNTYMGYLDYRKKTIKDLGISPSTCSFNPGVIVANMTEWKHQRITKQLEKWMQKNVEENLYSSSLGGGVATSPMLIVFHGKYSTINPLWHIRHLGWNPDVRYSEHFLQEAKLLHWNGRHKPWDFPSVHNNLWESWFVPDPAGIFKLHHNR
SIO_010081: Glt8d2
subclass of: SO_0000673
so part of: Glt8d2
location: join(7126168..7126192,7128733..7128825,7131732..7131903,7134043..7134160,7136331..7136415,7136969..7137081,7138487..7138653,7140489..7140601,7142185..7142354)
location: region:7126168-7142354:1
so has part: feature:7126168-7126192:1:exon
so has part: feature:7128733-7128825:1:exon
so has part: feature:7131732-7131903:1:exon
so has part: feature:7134043-7134160:1:exon
so has part: feature:7136331-7136415:1:exon
so has part: feature:7136969-7137081:1:exon
so has part: feature:7138487-7138653:1:exon
so has part: feature:7140489-7140601:1:exon
so has part: feature:7142185-7142354:1:exon

XP_036025797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7126168-7126192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7128733-7128825:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7131732-7131903:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7134043-7134160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7136331-7136415:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7136969-7137081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7138487-7138653:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7140489-7140601:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7142185-7142354:1:exon

Glt8d2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Glt8d2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycosyltransferase 8 domain-containing protein 2
translation: MHMALLRKINQVLLFLLALTLCGILYKKVHKGAVLKNEADDDSESPEDMEEEIPVVICAAPGRMGAAMAAINSIYSNTEANIVFYVVGLRNTLSRIRKWIEHSKLREINFRVVEFNPVVLKGKIRPDSSRPELLQPLNFVRFYLPLLIHQHEKVIYLDDDVIVQGDIQELYDTTLALGHAAAFSDDCDLPSAQDNNRIVGLQNTYMGYLDYRKKTIKDLGISPSTCSFNPGVIVANMTEWKHQRITKQLEKWMQKNVEENLYSSSLGGGVATSPMLIVFHGKYSTINPLWHIRHLGWNPDVRYSEHFLQEAKLLHWNGRHKPWDFPSVHNNLWESWFVPDPAGIFKLHHNR
SIO_010081: Glt8d2
subclass of: SO_0000673
so part of: Glt8d2
location: join(7126168..7126192,7128733..7128825,7131732..7131903,7134043..7134160,7136331..7136415,7136969..7137081,7138487..7138653,7140489..7140601,7142185..7142354)
location: region:7126168-7142354:1
so has part: feature:7126168-7126192:1:exon
so has part: feature:7128733-7128825:1:exon
so has part: feature:7131732-7131903:1:exon
so has part: feature:7134043-7134160:1:exon
so has part: feature:7136331-7136415:1:exon
so has part: feature:7136969-7137081:1:exon
so has part: feature:7138487-7138653:1:exon
so has part: feature:7140489-7140601:1:exon
so has part: feature:7142185-7142354:1:exon

XP_036025798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7126168-7126192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7128733-7128825:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7131732-7131903:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7134043-7134160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7136331-7136415:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7136969-7137081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7138487-7138653:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7140489-7140601:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7142185-7142354:1:exon

Tdg
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Tdg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7143319..7164414)
location: region:7143319-7164414:-1
so has part: feature:7143319-7164414:-1:exon
subclass of: SO_0000010

118571121
type: Gene
SIO_000068: ncbigene

position:7143319:-1
position: 7143319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7164414:-1
position: 7164414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7143319-7164414:-1:exon

Tdg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Tdg
product: thymine DNA glycosylase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036170036.1
SIO_010081: Tdg
subclass of: SO_0000673
so part of: Tdg
location: complement(join(7143319..7145115,7145803..7145928,7146559..7146730,7150337..7150431,7150514..7150596,7151122..7151257,7152614..7152683,7154201..7154442,7157470..7157603,7164236..7164414))
location: region:7143319-7164414:-1
so has part: feature:7164236-7164414:-1:exon
so has part: feature:7157470-7157603:-1:exon
so has part: feature:7154201-7154442:-1:exon
so has part: feature:7152614-7152683:-1:exon
so has part: feature:7151122-7151257:-1:exon
so has part: feature:7150514-7150596:-1:exon
so has part: feature:7150337-7150431:-1:exon
so has part: feature:7146559-7146730:-1:exon
so has part: feature:7145803-7145928:-1:exon
so has part: feature:7143319-7145115:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7164236-7164414:-1:exon

position:7164236:-1
position: 7164236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7157470-7157603:-1:exon

position:7157470:-1
position: 7157470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7157603:-1
position: 7157603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7154201-7154442:-1:exon

position:7154201:-1
position: 7154201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7154442:-1
position: 7154442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7152614-7152683:-1:exon

position:7152614:-1
position: 7152614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7152683:-1
position: 7152683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7151122-7151257:-1:exon

position:7151122:-1
position: 7151122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7151257:-1
position: 7151257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7150514-7150596:-1:exon

position:7150514:-1
position: 7150514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7150596:-1
position: 7150596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7150337-7150431:-1:exon

position:7150337:-1
position: 7150337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7150431:-1
position: 7150431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7146559-7146730:-1:exon

position:7146559:-1
position: 7146559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7146730:-1
position: 7146730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7145803-7145928:-1:exon

position:7145803:-1
position: 7145803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7145928:-1
position: 7145928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7143319-7145115:-1:exon

position:7145115:-1
position: 7145115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tdg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Tdg
product: thymine DNA glycosylase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036170035.1
SIO_010081: Tdg
subclass of: SO_0000673
so part of: Tdg
location: complement(join(7143319..7145118,7145803..7145928,7146559..7146730,7150337..7150431,7150514..7150596,7151122..7151257,7152614..7152683,7154201..7154442,7157470..7157603,7164236..7164414))
location: region:7143319-7164414:-1
so has part: feature:7164236-7164414:-1:exon
so has part: feature:7157470-7157603:-1:exon
so has part: feature:7154201-7154442:-1:exon
so has part: feature:7152614-7152683:-1:exon
so has part: feature:7151122-7151257:-1:exon
so has part: feature:7150514-7150596:-1:exon
so has part: feature:7150337-7150431:-1:exon
so has part: feature:7146559-7146730:-1:exon
so has part: feature:7145803-7145928:-1:exon
so has part: feature:7143319-7145118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7164236-7164414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7157470-7157603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7154201-7154442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7152614-7152683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7151122-7151257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7150514-7150596:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7150337-7150431:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7146559-7146730:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7145803-7145928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7143319-7145118:-1:exon

position:7145118:-1
position: 7145118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tdg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Tdg
product: thymine DNA glycosylase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_036170037.1
SIO_010081: Tdg
subclass of: SO_0000673
so part of: Tdg
location: complement(join(7143319..7145118,7145803..7145928,7146559..7146730,7150337..7150431,7150514..7150596,7151122..7151257,7152614..7152683,7154201..7154442,7157470..7157603,7164001..7164203))
location: region:7143319-7164203:-1
so has part: feature:7164001-7164203:-1:exon
so has part: feature:7157470-7157603:-1:exon
so has part: feature:7154201-7154442:-1:exon
so has part: feature:7152614-7152683:-1:exon
so has part: feature:7151122-7151257:-1:exon
so has part: feature:7150514-7150596:-1:exon
so has part: feature:7150337-7150431:-1:exon
so has part: feature:7146559-7146730:-1:exon
so has part: feature:7145803-7145928:-1:exon
so has part: feature:7143319-7145118:-1:exon

position:7164203:-1
position: 7164203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7164001-7164203:-1:exon

position:7164001:-1
position: 7164001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7157470-7157603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7154201-7154442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7152614-7152683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7151122-7151257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7150514-7150596:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7150337-7150431:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7146559-7146730:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7145803-7145928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7143319-7145118:-1:exon

Tdg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Tdg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G/T mismatch-specific thymine DNA glycosylase isoform X2
translation: MDAEGARSYSLEQVQAFYSFPFQQMMAEAPNMAVTTEEQMPAEARAQEEPAPEAPKRRKRKTRASEPKDPVEPKKPAEPKKSGKSTKSKEKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGVERNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGSAYGENPSNSEPRSFPSNGLTDGTELRGESAPGDVPNGQWMAQSFTDQIPSFNNCGTHGQEEGSHA
SIO_010081: Tdg
subclass of: SO_0000673
so part of: Tdg
location: complement(join(7144976..7145115,7145803..7145928,7146559..7146730,7150337..7150431,7150514..7150596,7151122..7151257,7152614..7152683,7154201..7154442,7157470..7157603,7164236..7164258))
location: region:7144976-7164258:-1
so has part: feature:7164236-7164258:-1:exon
so has part: feature:7157470-7157603:-1:exon
so has part: feature:7154201-7154442:-1:exon
so has part: feature:7152614-7152683:-1:exon
so has part: feature:7151122-7151257:-1:exon
so has part: feature:7150514-7150596:-1:exon
so has part: feature:7150337-7150431:-1:exon
so has part: feature:7146559-7146730:-1:exon
so has part: feature:7145803-7145928:-1:exon
so has part: feature:7144976-7145115:-1:exon

XP_036025929.1
type: Protein
SIO_000068: ncbiprotein

position:7144976:-1
position: 7144976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7164258:-1
position: 7164258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7164236-7164258:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7157470-7157603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7154201-7154442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7152614-7152683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7151122-7151257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7150514-7150596:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7150337-7150431:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7146559-7146730:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7145803-7145928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7144976-7145115:-1:exon

Tdg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Tdg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G/T mismatch-specific thymine DNA glycosylase isoform X1
translation: MDAEGARSYSLEQVQAFYSFPFQQMMAEAPNMAVTTEEQMPAEARAQEEPAPEAPKRRKRKTRASEPKDPVEPKKPAEPKKSGKSTKSKEKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGVERNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGSAYGENPSNSEPRSFPSNGLTADGTELRGESAPGDVPNGQWMAQSFTDQIPSFNNCGTHGQEEGSHA
SIO_010081: Tdg
subclass of: SO_0000673
so part of: Tdg
location: complement(join(7144976..7145118,7145803..7145928,7146559..7146730,7150337..7150431,7150514..7150596,7151122..7151257,7152614..7152683,7154201..7154442,7157470..7157603,7164236..7164258))
location: region:7144976-7164258:-1
so has part: feature:7164236-7164258:-1:exon
so has part: feature:7157470-7157603:-1:exon
so has part: feature:7154201-7154442:-1:exon
so has part: feature:7152614-7152683:-1:exon
so has part: feature:7151122-7151257:-1:exon
so has part: feature:7150514-7150596:-1:exon
so has part: feature:7150337-7150431:-1:exon
so has part: feature:7146559-7146730:-1:exon
so has part: feature:7145803-7145928:-1:exon
so has part: feature:7144976-7145118:-1:exon

XP_036025928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7164236-7164258:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7157470-7157603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7154201-7154442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7152614-7152683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7151122-7151257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7150514-7150596:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7150337-7150431:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7146559-7146730:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7145803-7145928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7144976-7145118:-1:exon

Tdg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Tdg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G/T mismatch-specific thymine DNA glycosylase isoform X3
translation: MMAEAPNMAVTTEEQMPAEARAQEEPAPEAPKRRKRKTRASEPKDPVEPKKPAEPKKSGKSTKSKEKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGVERNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGSAYGENPSNSEPRSFPSNGLTADGTELRGESAPGDVPNGQWMAQSFTDQIPSFNNCGTHGQEEGSHA
SIO_010081: Tdg
subclass of: SO_0000673
so part of: Tdg
location: complement(join(7144976..7145118,7145803..7145928,7146559..7146730,7150337..7150431,7150514..7150596,7151122..7151257,7152614..7152683,7154201..7154442,7157470..7157554))
location: region:7144976-7157554:-1
so has part: feature:7157470-7157554:-1:exon
so has part: feature:7154201-7154442:-1:exon
so has part: feature:7152614-7152683:-1:exon
so has part: feature:7151122-7151257:-1:exon
so has part: feature:7150514-7150596:-1:exon
so has part: feature:7150337-7150431:-1:exon
so has part: feature:7146559-7146730:-1:exon
so has part: feature:7145803-7145928:-1:exon
so has part: feature:7144976-7145118:-1:exon

XP_036025930.1
type: Protein
SIO_000068: ncbiprotein

position:7157554:-1
position: 7157554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7157470-7157554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7154201-7154442:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7152614-7152683:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7151122-7151257:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7150514-7150596:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7150337-7150431:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7146559-7146730:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7145803-7145928:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7144976-7145118:-1:exon

C20H12orf73
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: C20H12orf73
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7171426..7178710
location: region:7171426-7178710:1
so has part: feature:7171426-7178710:1:exon
subclass of: SO_0000010

118570976
type: Gene
SIO_000068: ncbigene

position:7171426:1
position: 7171426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7178710:1
position: 7178710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7171426-7178710:1:exon

C20H12orf73
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: C20H12orf73
product: chromosome 20 C12orf73 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_036169779.1
SIO_010081: C20H12orf73
subclass of: SO_0000673
so part of: C20H12orf73
location: join(7171426..7171495,7171749..7171865,7175058..7175185,7178477..7178710)
location: region:7171426-7178710:1
so has part: feature:7171426-7171495:1:exon
so has part: feature:7171749-7171865:1:exon
so has part: feature:7175058-7175185:1:exon
so has part: feature:7178477-7178710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7171426-7171495:1:exon

position:7171495:1
position: 7171495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7171749-7171865:1:exon

position:7171749:1
position: 7171749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7171865:1
position: 7171865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7175058-7175185:1:exon

position:7175058:1
position: 7175058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7175185:1
position: 7175185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7178477-7178710:1:exon

position:7178477:1
position: 7178477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C20H12orf73
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: C20H12orf73
product: chromosome 20 C12orf73 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169778.1
SIO_010081: C20H12orf73
subclass of: SO_0000673
so part of: C20H12orf73
location: join(7171426..7171495,7171749..7171865,7175058..7175370)
location: region:7171426-7175370:1
so has part: feature:7171426-7171495:1:exon
so has part: feature:7171749-7171865:1:exon
so has part: feature:7175058-7175370:1:exon

position:7175370:1
position: 7175370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7171426-7171495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7171749-7171865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7175058-7175370:1:exon

C20H12orf73
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: C20H12orf73
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BRAWNIN
translation: MPGGVPWSAYLKMLSSSLLAMCAGAQMVHWYYQPDLTIPEIPPKPGELKTELLGLKERHHKPQVSQQ
SIO_010081: C20H12orf73
subclass of: SO_0000673
so part of: C20H12orf73
location: join(7171758..7171865,7175058..7175153)
location: region:7171758-7175153:1
so has part: feature:7171758-7171865:1:exon
so has part: feature:7175058-7175153:1:exon

XP_036025671.1
type: Protein
SIO_000068: ncbiprotein

position:7171758:1
position: 7171758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7175153:1
position: 7175153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7171758-7171865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7175058-7175153:1:exon

C20H12orf73
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: C20H12orf73
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BRAWNIN
translation: MPGGVPWSAYLKMLSSSLLAMCAGAQMVHWYYQPDLTIPEIPPKPGELKTELLGLKERHHKPQVSQQ
SIO_010081: C20H12orf73
subclass of: SO_0000673
so part of: C20H12orf73
location: join(7171758..7171865,7175058..7175153)
location: region:7171758-7175153:1
so has part: feature:7171758-7171865:1:exon
so has part: feature:7175058-7175153:1:exon

XP_036025672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7171758-7171865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7175058-7175153:1:exon

Hsp90b1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Hsp90b1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7178077..7191686)
location: region:7178077-7191686:-1
so has part: feature:7178077-7191686:-1:exon
subclass of: SO_0000010

118570975
type: Gene
SIO_000068: ncbigene

position:7178077:-1
position: 7178077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7191686:-1
position: 7191686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7178077-7191686:-1:exon

Hsp90b1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Hsp90b1
product: heat shock protein 90 beta family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169777.1
SIO_010081: Hsp90b1
subclass of: SO_0000673
so part of: Hsp90b1
location: complement(join(7178077..7178386,7178820..7178936,7179205..7179360,7179451..7179529,7180485..7180621,7180920..7181165,7181342..7181611,7182490..7182555,7182667..7182744,7182832..7182969,7183814..7183930,7184893..7185012,7185177..7185288,7187513..7187844,7188921..7189037,7189515..7189656,7190430..7190532,7191469..7191686))
location: region:7178077-7191686:-1
so has part: feature:7191469-7191686:-1:exon
so has part: feature:7190430-7190532:-1:exon
so has part: feature:7189515-7189656:-1:exon
so has part: feature:7188921-7189037:-1:exon
so has part: feature:7187513-7187844:-1:exon
so has part: feature:7185177-7185288:-1:exon
so has part: feature:7184893-7185012:-1:exon
so has part: feature:7183814-7183930:-1:exon
so has part: feature:7182832-7182969:-1:exon
so has part: feature:7182667-7182744:-1:exon
so has part: feature:7182490-7182555:-1:exon
so has part: feature:7181342-7181611:-1:exon
so has part: feature:7180920-7181165:-1:exon
so has part: feature:7180485-7180621:-1:exon
so has part: feature:7179451-7179529:-1:exon
so has part: feature:7179205-7179360:-1:exon
so has part: feature:7178820-7178936:-1:exon
so has part: feature:7178077-7178386:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7191469-7191686:-1:exon

position:7191469:-1
position: 7191469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7190430-7190532:-1:exon

position:7190430:-1
position: 7190430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7190532:-1
position: 7190532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7189515-7189656:-1:exon

position:7189515:-1
position: 7189515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7189656:-1
position: 7189656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7188921-7189037:-1:exon

position:7188921:-1
position: 7188921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7189037:-1
position: 7189037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7187513-7187844:-1:exon

position:7187513:-1
position: 7187513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7187844:-1
position: 7187844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7185177-7185288:-1:exon

position:7185177:-1
position: 7185177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7185288:-1
position: 7185288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7184893-7185012:-1:exon

position:7184893:-1
position: 7184893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7185012:-1
position: 7185012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7183814-7183930:-1:exon

position:7183814:-1
position: 7183814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7183930:-1
position: 7183930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7182832-7182969:-1:exon

position:7182832:-1
position: 7182832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7182969:-1
position: 7182969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7182667-7182744:-1:exon

position:7182667:-1
position: 7182667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7182744:-1
position: 7182744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7182490-7182555:-1:exon

position:7182490:-1
position: 7182490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7182555:-1
position: 7182555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7181342-7181611:-1:exon

position:7181342:-1
position: 7181342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7181611:-1
position: 7181611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7180920-7181165:-1:exon

position:7180920:-1
position: 7180920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7181165:-1
position: 7181165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7180485-7180621:-1:exon

position:7180485:-1
position: 7180485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7180621:-1
position: 7180621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7179451-7179529:-1:exon

position:7179451:-1
position: 7179451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7179529:-1
position: 7179529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7179205-7179360:-1:exon

position:7179205:-1
position: 7179205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7179360:-1
position: 7179360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7178820-7178936:-1:exon

position:7178820:-1
position: 7178820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7178936:-1
position: 7178936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7178077-7178386:-1:exon

position:7178386:-1
position: 7178386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hsp90b1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Hsp90b1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmin
translation: MRVLWVLGLCCVLLTFGFVRADDEVDVDGTVEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTQAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVRKYSQFINFPIYVWSSKTETVEEPLEEDEAAKEEKEESDDEAAVEEEEEEKKPKTKKVEKTVWDWELMNDIKPIWQRPSKEVEEDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIAEEKYNDTFWKEFGTNVKLGVIEDHSNRTRLAKLLRFQSSHHATDVTSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKSKESREATEKEFEPLLAWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIRDMLRRVKEDEEDKTVLDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDPEAQVEEEPEEEPEDTTEDMEQDEEEEVDAGTEEEEEEEETAKESTAEKDEL
SIO_010081: Hsp90b1
subclass of: SO_0000673
so part of: Hsp90b1
location: complement(join(7178357..7178386,7178820..7178936,7179205..7179360,7179451..7179529,7180485..7180621,7180920..7181165,7181342..7181611,7182490..7182555,7182667..7182744,7182832..7182969,7183814..7183930,7184893..7185012,7185177..7185288,7187513..7187844,7188921..7189037,7189515..7189656,7190430..7190532,7191469..7191517))
location: region:7178357-7191517:-1
so has part: feature:7191469-7191517:-1:exon
so has part: feature:7190430-7190532:-1:exon
so has part: feature:7189515-7189656:-1:exon
so has part: feature:7188921-7189037:-1:exon
so has part: feature:7187513-7187844:-1:exon
so has part: feature:7185177-7185288:-1:exon
so has part: feature:7184893-7185012:-1:exon
so has part: feature:7183814-7183930:-1:exon
so has part: feature:7182832-7182969:-1:exon
so has part: feature:7182667-7182744:-1:exon
so has part: feature:7182490-7182555:-1:exon
so has part: feature:7181342-7181611:-1:exon
so has part: feature:7180920-7181165:-1:exon
so has part: feature:7180485-7180621:-1:exon
so has part: feature:7179451-7179529:-1:exon
so has part: feature:7179205-7179360:-1:exon
so has part: feature:7178820-7178936:-1:exon
so has part: feature:7178357-7178386:-1:exon

XP_036025670.1
type: Protein
SIO_000068: ncbiprotein

position:7178357:-1
position: 7178357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7191517:-1
position: 7191517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7191469-7191517:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7190430-7190532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7189515-7189656:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7188921-7189037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7187513-7187844:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7185177-7185288:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7184893-7185012:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7183814-7183930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7182832-7182969:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7182667-7182744:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7182490-7182555:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7181342-7181611:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7180920-7181165:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7180485-7180621:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7179451-7179529:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7179205-7179360:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7178820-7178936:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7178357-7178386:-1:exon

LOC118570839
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570839
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7192542..7251748
location: region:7192542-7251748:1
so has part: feature:7192542-7251748:1:exon
subclass of: SO_0000010

118570839
type: Gene
SIO_000068: ncbigene

position:7192542:1
position: 7192542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7251748:1
position: 7251748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7192542-7251748:1:exon

LOC118570839
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118570839
product: tetratricopeptide repeat protein 41-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036169489.1
SIO_010081: LOC118570839
subclass of: SO_0000673
so part of: LOC118570839
location: join(7192542..7192858,7198601..7199560,7204931..7205105,7209938..7210152,7215600..7215760,7216970..7217411,7219715..7219954,7222808..7223006,7224326..7224504,7229118..7229257,7234975..7235146,7235936..7236083,7238043..7238195,7240400..7240533,7250875..7251004,7251097..7251748)
location: region:7192542-7251748:1
so has part: feature:7192542-7192858:1:exon
so has part: feature:7198601-7199560:1:exon
so has part: feature:7204931-7205105:1:exon
so has part: feature:7209938-7210152:1:exon
so has part: feature:7215600-7215760:1:exon
so has part: feature:7216970-7217411:1:exon
so has part: feature:7219715-7219954:1:exon
so has part: feature:7222808-7223006:1:exon
so has part: feature:7224326-7224504:1:exon
so has part: feature:7229118-7229257:1:exon
so has part: feature:7234975-7235146:1:exon
so has part: feature:7235936-7236083:1:exon
so has part: feature:7238043-7238195:1:exon
so has part: feature:7240400-7240533:1:exon
so has part: feature:7250875-7251004:1:exon
so has part: feature:7251097-7251748:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7192542-7192858:1:exon

position:7192858:1
position: 7192858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7198601-7199560:1:exon

position:7198601:1
position: 7198601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7199560:1
position: 7199560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7204931-7205105:1:exon

position:7204931:1
position: 7204931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7205105:1
position: 7205105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7209938-7210152:1:exon

position:7209938:1
position: 7209938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7210152:1
position: 7210152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7215600-7215760:1:exon

position:7215600:1
position: 7215600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7215760:1
position: 7215760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7216970-7217411:1:exon

position:7216970:1
position: 7216970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7217411:1
position: 7217411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7219715-7219954:1:exon

position:7219715:1
position: 7219715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7219954:1
position: 7219954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7222808-7223006:1:exon

position:7222808:1
position: 7222808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7223006:1
position: 7223006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7224326-7224504:1:exon

position:7224326:1
position: 7224326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7224504:1
position: 7224504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7229118-7229257:1:exon

position:7229118:1
position: 7229118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7229257:1
position: 7229257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7234975-7235146:1:exon

position:7234975:1
position: 7234975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7235146:1
position: 7235146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7235936-7236083:1:exon

position:7235936:1
position: 7235936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7236083:1
position: 7236083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7238043-7238195:1:exon

position:7238043:1
position: 7238043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7238195:1
position: 7238195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7240400-7240533:1:exon

position:7240400:1
position: 7240400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7240533:1
position: 7240533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7250875-7251004:1:exon

position:7250875:1
position: 7250875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7251004:1
position: 7251004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7251097-7251748:1:exon

position:7251097:1
position: 7251097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118570839
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118570839
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 41-like
translation: MNQVAGDPGARCSIQPNLQRQKPIQPYVCSTLEDFQEERDFLANTIFPRLNDFCSPRGTYFKAVDLRWSAVKAHKSFTTNLFRQYTCLCSQHLKLCLDYVDICSPFFICLLGQTYGDFLPHYTPFLFSNIKDFTNLSKGEQNLYVAAKNGYPWVLETPNCSLTEFEITQAAFRKESQFQFFYFRTSNSLLRTFSEEEEGKLSPAFLMNEEGKLKVGRLKAKIIGKGLPVRFYRDLDELGDLVFKDWSAVVEKLYPVPIIMENIDYKHSLEYLYHEEFAEKCEQVFVISKESNRTFEILERFALKDVELDSKSTDLGLDSILRINALPTYKSILLLSGERGCGKSTLIASWVNYFKSKHPGVLMIPYFVGSTCESSDIMSVIHYFIMELQHRAHGPQIEMDFLNEDSSVLVFSLLVEVFMAFISLKPCVLVLDGIEELIGIYGISGQKAKDFSWLPCSLPPHCKFILSTVSSSLSCKSLCARPDVRTLELSGMGDEDTKFSIFRQHLSTPDKERFGQSKPILRKKPNLTPLKLAIIASELQECRIYRNEFQCLREYLETASVQELWELILKRWVEDYGWNLKHKETNPDAVASGKGLSGWVADALCMLCISHCGLAEDELLHLLDMLGYRNNQKVTSVHWAAFRNATKHWIQEKPDGLLCFRHQSLRNAVEHKVLGVITPVRESSPNMSQNTVNHKKARFHQVLMRYFQRQTIFWRVYQELPWHMKMSRCWEGLCSFVTSPSITDFISKIHNPSLWTRLHLVHYWDVLLEAGYDVSESFLLCVAKIEAEQCQKVKKRPTISVLECSLSQVTAADKCRMILFVGSFLKLMGKINDAEKLFLTVEEMLLQSPSMTEMLLKAQNAIGELYLEIGMTEKGLTYFQKAWSNLLRFTLSDLKTSQELMKQKVRVMNNLVKSASEEFLQESHILDYATEISKLVTDSPRDQATMKYTEGVLMLAAGNVPVARLKFQECLHIRRRLFGDKNVLVGEIMEFLADLLFFLLEDNEKSQKKQVTEYYKQVIKIKENSDTVATCKLVRKQLSISLSDTLCKLAGQLLSGDFCHHAMMEAVSYLYRSLDLRSTHLGSSHASIQGILHLLREIQRFRGRRFWPQGMSQLRSEGSKNGSLLWENLSKLNFCSAQSSDTVNTAMCMNVSKLQGAKSAEPVVSSPVSDKPKCFPGKGKKTLIPILSAGEKTQIWNGPRKQAPRKKNYPIKTLSVGEKNGLVKLSRQRVFSAKCESGDGLITAIYRQPPRAPLSANNPWQSISELVSEKWLFHTPQYSFTPQKFVFPRRSQIETKWLRISDDTNNE
SIO_010081: LOC118570839
subclass of: SO_0000673
so part of: LOC118570839
location: join(7198771..7199560,7204931..7205105,7209938..7210152,7215600..7215760,7216970..7217411,7219715..7219954,7222808..7223006,7224326..7224504,7229118..7229257,7234975..7235146,7235936..7236083,7238043..7238195,7240400..7240533,7250875..7251004,7251097..7251742)
location: region:7198771-7251742:1
so has part: feature:7198771-7199560:1:exon
so has part: feature:7204931-7205105:1:exon
so has part: feature:7209938-7210152:1:exon
so has part: feature:7215600-7215760:1:exon
so has part: feature:7216970-7217411:1:exon
so has part: feature:7219715-7219954:1:exon
so has part: feature:7222808-7223006:1:exon
so has part: feature:7224326-7224504:1:exon
so has part: feature:7229118-7229257:1:exon
so has part: feature:7234975-7235146:1:exon
so has part: feature:7235936-7236083:1:exon
so has part: feature:7238043-7238195:1:exon
so has part: feature:7240400-7240533:1:exon
so has part: feature:7250875-7251004:1:exon
so has part: feature:7251097-7251742:1:exon

XP_036025382.1
type: Protein
SIO_000068: ncbiprotein

position:7198771:1
position: 7198771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7251742:1
position: 7251742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7198771-7199560:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7204931-7205105:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7209938-7210152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7215600-7215760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7216970-7217411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7219715-7219954:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7222808-7223006:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7224326-7224504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7229118-7229257:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7234975-7235146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7235936-7236083:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7238043-7238195:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7240400-7240533:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7250875-7251004:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7251097-7251742:1:exon

Nt5dc3
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Nt5dc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7253900..7304748
location: region:7253900-7304748:1
so has part: feature:7253900-7304748:1:exon
subclass of: SO_0000010

118571013
type: Gene
SIO_000068: ncbigene

position:7253900:1
position: 7253900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7304748:1
position: 7304748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7253900-7304748:1:exon

Nt5dc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Nt5dc3
product: 5'-nucleotidase domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169861.1
SIO_010081: Nt5dc3
subclass of: SO_0000673
so part of: Nt5dc3
location: join(7253900..7254209,7276327..7276511,7282777..7282851,7283473..7283528,7286532..7286622,7287719..7287856,7291030..7291090,7291497..7291599,7291725..7291826,7293525..7293606,7294660..7294746,7295678..7295818,7301465..7301529,7303334..7304748)
location: region:7253900-7304748:1
so has part: feature:7253900-7254209:1:exon
so has part: feature:7276327-7276511:1:exon
so has part: feature:7282777-7282851:1:exon
so has part: feature:7283473-7283528:1:exon
so has part: feature:7286532-7286622:1:exon
so has part: feature:7287719-7287856:1:exon
so has part: feature:7291030-7291090:1:exon
so has part: feature:7291497-7291599:1:exon
so has part: feature:7291725-7291826:1:exon
so has part: feature:7293525-7293606:1:exon
so has part: feature:7294660-7294746:1:exon
so has part: feature:7295678-7295818:1:exon
so has part: feature:7301465-7301529:1:exon
so has part: feature:7303334-7304748:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7253900-7254209:1:exon

position:7254209:1
position: 7254209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7276327-7276511:1:exon

position:7276327:1
position: 7276327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7276511:1
position: 7276511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7282777-7282851:1:exon

position:7282777:1
position: 7282777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7282851:1
position: 7282851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7283473-7283528:1:exon

position:7283473:1
position: 7283473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7283528:1
position: 7283528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7286532-7286622:1:exon

position:7286532:1
position: 7286532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7286622:1
position: 7286622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7287719-7287856:1:exon

position:7287719:1
position: 7287719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7287856:1
position: 7287856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7291030-7291090:1:exon

position:7291030:1
position: 7291030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7291090:1
position: 7291090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7291497-7291599:1:exon

position:7291497:1
position: 7291497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7291599:1
position: 7291599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7291725-7291826:1:exon

position:7291725:1
position: 7291725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7291826:1
position: 7291826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7293525-7293606:1:exon

position:7293525:1
position: 7293525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7293606:1
position: 7293606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7294660-7294746:1:exon

position:7294660:1
position: 7294660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7294746:1
position: 7294746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7295678-7295818:1:exon

position:7295678:1
position: 7295678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7295818:1
position: 7295818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7301465-7301529:1:exon

position:7301465:1
position: 7301465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7301529:1
position: 7301529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7303334-7304748:1:exon

position:7303334:1
position: 7303334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nt5dc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Nt5dc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-nucleotidase domain-containing protein 3
translation: MATVAAVARGAGARAAAGLRGGSGAAARGRPRASCARRLCTAPAAVDMKRYLWERYHEAKRSTDELVPSIMSNLLNPDAIFSNNEMSLSDIEIYGFDYDYTLVFYSKHLHTLIFNAARDLLINEHRYPVEIRKYEYDPNFAIRGLHYDVQRAILMKIDAFHYIQMGTVYRGLSVVPDEEVIEMYEGSHVPLEQMSDFYGKSSHGNTMKQFMDIFSLPEMTLLSCVNEHFLKNNIDYEPVHLYKDVKDSIRDVHIKGIMYRAIEADIEKYICYAEQTRAVLAKLAAHGKKMFLITNSPSSFVDKGMRYIVGKDWRDLFDVVIVQAEKPNFFNDKRRPFRKVNEKGVLLWDKIHKLQKGQIYKQGNLYEFLKLTGWRGSKVLYFGDHIYSDLADLTLKHGWRTGAIIPELRSELRIMNTEQYIQTMTWLQTLTGLLEQMQVHRDAESQLVLQEWRKERKEMREMTKSFFNAQFGSLFRTDQNPTYFLRRLSRFADIYMASLSCLLNYDVHHTFYPRRTPLQHELPAWSDSPSAFRAPLLQEVQAK
SIO_010081: Nt5dc3
subclass of: SO_0000673
so part of: Nt5dc3
location: join(7254017..7254209,7276327..7276511,7282777..7282851,7283473..7283528,7286532..7286622,7287719..7287856,7291030..7291090,7291497..7291599,7291725..7291826,7293525..7293606,7294660..7294746,7295678..7295818,7301465..7301529,7303334..7303586)
location: region:7254017-7303586:1
so has part: feature:7254017-7254209:1:exon
so has part: feature:7276327-7276511:1:exon
so has part: feature:7282777-7282851:1:exon
so has part: feature:7283473-7283528:1:exon
so has part: feature:7286532-7286622:1:exon
so has part: feature:7287719-7287856:1:exon
so has part: feature:7291030-7291090:1:exon
so has part: feature:7291497-7291599:1:exon
so has part: feature:7291725-7291826:1:exon
so has part: feature:7293525-7293606:1:exon
so has part: feature:7294660-7294746:1:exon
so has part: feature:7295678-7295818:1:exon
so has part: feature:7301465-7301529:1:exon
so has part: feature:7303334-7303586:1:exon

XP_036025754.1
type: Protein
SIO_000068: ncbiprotein

position:7254017:1
position: 7254017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7303586:1
position: 7303586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7254017-7254209:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7276327-7276511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7282777-7282851:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7283473-7283528:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7286532-7286622:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7287719-7287856:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7291030-7291090:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7291497-7291599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7291725-7291826:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7293525-7293606:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7294660-7294746:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7295678-7295818:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7301465-7301529:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7303334-7303586:1:exon

Stab2
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Stab2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7310596..7480809)
location: region:7310596-7480809:-1
so has part: feature:7310596-7480809:-1:exon
subclass of: SO_0000010

118571263
type: Gene
SIO_000068: ncbigene

position:7310596:-1
position: 7310596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7480809:-1
position: 7480809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7310596-7480809:-1:exon

Stab2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Stab2
product: stabilin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036170220.1
SIO_010081: Stab2
subclass of: SO_0000673
so part of: Stab2
location: complement(join(7310596..7310718,7311907..7312023,7314310..7314438,7316285..7316392,7317848..7317988,7318775..7318885,7320212..7320318,7320455..7320620,7323847..7323980,7326132..7326273,7327749..7327942,7331178..7331285,7332386..7332490,7333864..7334013,7335662..7335791,7337493..7337549,7339082..7339228,7339560..7339649,7340984..7341160,7342336..7342395,7343931..7344071,7344698..7344844,7346283..7346366,7347751..7347798,7349073..7349192,7354161..7354232,7355821..7355894,7357713..7357838,7360491..7360567,7361311..7361356,7364167..7364262,7367726..7367921,7369063..7369155,7370718..7370774,7372918..7373046,7378231..7378362,7379959..7380066,7380149..7380247,7391858..7391935,7393937..7394051,7394471..7394607,7395843..7395890,7398059..7398154,7399227..7399322,7403705..7403863,7406847..7406943,7410724..7410904,7414031..7414142,7415930..7416016,7416771..7416857,7421090..7421152,7424237..7424389,7427395..7427475,7427778..7427831,7430847..7430972,7431098..7431154,7431701..7431841,7433725..7433874,7434885..7434967,7436445..7436578,7441398..7441531,7442984..7443180,7443534..7443659,7446336..7446431,7452596..7452665,7453475..7453560,7472917..7473032,7478244..7478377,7480732..7480809))
location: region:7310596-7480809:-1
so has part: feature:7480732-7480809:-1:exon
so has part: feature:7478244-7478377:-1:exon
so has part: feature:7472917-7473032:-1:exon
so has part: feature:7453475-7453560:-1:exon
so has part: feature:7452596-7452665:-1:exon
so has part: feature:7446336-7446431:-1:exon
so has part: feature:7443534-7443659:-1:exon
so has part: feature:7442984-7443180:-1:exon
so has part: feature:7441398-7441531:-1:exon
so has part: feature:7436445-7436578:-1:exon
so has part: feature:7434885-7434967:-1:exon
so has part: feature:7433725-7433874:-1:exon
so has part: feature:7431701-7431841:-1:exon
so has part: feature:7431098-7431154:-1:exon
so has part: feature:7430847-7430972:-1:exon
so has part: feature:7427778-7427831:-1:exon
so has part: feature:7427395-7427475:-1:exon
so has part: feature:7424237-7424389:-1:exon
so has part: feature:7421090-7421152:-1:exon
so has part: feature:7416771-7416857:-1:exon
so has part: feature:7415930-7416016:-1:exon
so has part: feature:7414031-7414142:-1:exon
so has part: feature:7410724-7410904:-1:exon
so has part: feature:7406847-7406943:-1:exon
so has part: feature:7403705-7403863:-1:exon
so has part: feature:7399227-7399322:-1:exon
so has part: feature:7398059-7398154:-1:exon
so has part: feature:7395843-7395890:-1:exon
so has part: feature:7394471-7394607:-1:exon
so has part: feature:7393937-7394051:-1:exon
so has part: feature:7391858-7391935:-1:exon
so has part: feature:7380149-7380247:-1:exon
so has part: feature:7379959-7380066:-1:exon
so has part: feature:7378231-7378362:-1:exon
so has part: feature:7372918-7373046:-1:exon
so has part: feature:7370718-7370774:-1:exon
so has part: feature:7369063-7369155:-1:exon
so has part: feature:7367726-7367921:-1:exon
so has part: feature:7364167-7364262:-1:exon
so has part: feature:7361311-7361356:-1:exon
so has part: feature:7360491-7360567:-1:exon
so has part: feature:7357713-7357838:-1:exon
so has part: feature:7355821-7355894:-1:exon
so has part: feature:7354161-7354232:-1:exon
so has part: feature:7349073-7349192:-1:exon
so has part: feature:7347751-7347798:-1:exon
so has part: feature:7346283-7346366:-1:exon
so has part: feature:7344698-7344844:-1:exon
so has part: feature:7343931-7344071:-1:exon
so has part: feature:7342336-7342395:-1:exon
so has part: feature:7340984-7341160:-1:exon
so has part: feature:7339560-7339649:-1:exon
so has part: feature:7339082-7339228:-1:exon
so has part: feature:7337493-7337549:-1:exon
so has part: feature:7335662-7335791:-1:exon
so has part: feature:7333864-7334013:-1:exon
so has part: feature:7332386-7332490:-1:exon
so has part: feature:7331178-7331285:-1:exon
so has part: feature:7327749-7327942:-1:exon
so has part: feature:7326132-7326273:-1:exon
so has part: feature:7323847-7323980:-1:exon
so has part: feature:7320455-7320620:-1:exon
so has part: feature:7320212-7320318:-1:exon
so has part: feature:7318775-7318885:-1:exon
so has part: feature:7317848-7317988:-1:exon
so has part: feature:7316285-7316392:-1:exon
so has part: feature:7314310-7314438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7480732-7480809:-1:exon

position:7480732:-1
position: 7480732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7478244-7478377:-1:exon

position:7478244:-1
position: 7478244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7478377:-1
position: 7478377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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