Onychomys torridus chromosome 19, mOncTor1.1, whole genome shotgun sequence.
type: Entry
definition: Onychomys torridus chromosome 19, mOncTor1.1, whole genome shotgun sequence.
sequence version: NC_050461.1
sequence date: 2020-09-23
sequence: sequence
division: CON
label: NC_050461.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA664182
dblink: SAMEA104026389
keyword: WGS
keyword: RefSeq
source: Onychomys torridus (southern grasshopper mouse)
organism: Onychomys torridus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Onychomys.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR877206.1.\nAssembly name: mOncTor1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the SC on 2020/08/21. The\noriginal whole-genome shotgun project has the accession\nCAJFAA000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Onychomys torridus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 66005817
topology: linear
so has quality: SO_0000987
location: 1..66005817
location: region:1-66005817:1
RO_0002162: 38674

NC_050461
type: RefSeq
SIO_000068: refseq

PRJNA664182
type: BioProject
SIO_000068: bioproject

SAMEA104026389
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66005817:1
position: 66005817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-66005817:1:source
so part of: sequence
organism: Onychomys torridus
mol type: genomic DNA
chromosome: 19

38674
type: Taxonomy
SIO_000068: taxonomy

LOC118570196
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570196
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(74551..75316)
location: region:74551-75316:-1
so has part: feature:74551-75316:-1:exon

118570196
type: Gene
SIO_000068: ncbigene

position:74551:-1
position: 74551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75316:-1
position: 75316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74551-75316:-1:exon

LOC118570196
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC118570196
subclass of: SO_0000673
so part of: LOC118570196
location: complement(74551..75316)
location: region:74551-75316:-1
so has part: feature:74551-75316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74551-75316:-1:exon

LOC118570648
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 298312..300449
location: region:298312-300449:1
so has part: feature:298312-300449:1:exon
subclass of: SO_0000010

118570648
type: Gene
SIO_000068: ncbigene

position:298312:1
position: 298312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300449:1
position: 300449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298312-300449:1:exon

LOC118570648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118570648
product: ribosomal protein S6 kinase alpha-3-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036169311.1
SIO_010081: LOC118570648
subclass of: SO_0000673
so part of: LOC118570648
location: 298312..300449
location: region:298312-300449:1
so has part: feature:298312-300449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:298312-300449:1:exon

LOC118570648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118570648
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:299786..299788,aa:OTHER)
product: LOW QUALITY PROTEIN: ribosomal protein S6 kinase alpha-3-like
translation: MDEPMGEEEINPQTEEGNIEEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKKKISGSDARQLYAMKVLKKATLKVQDSVWTKMERDILVEVNHPFIAKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAKLALALGHLHTLGIIYRDLKPENILLDEEGHIKLTDFGLNKESIDHEKKAYSFCGTVEYMAPEVVNCRGHTQSADWWSFRVLMFEMLIGTLPFQGKDHKETMTMILKAKLGMPQFLSPEAQSLLRMLFKWNPANRLGAGPDGVEEIKRHSFFSAIDWHKLYRREIHLPFKPATGRPEDTFYFDPEFTSKTPKDSPGIPPSANTHQLFGGFSFVAITSDDESQAMQTVGMLLIVQQLHGNSIQFTDGYEVKEDIGIGSYSVCKRCIHKATNMEFAVKIIDKSKRDATEEIEILLRYGQHPNTITLKDVYDDGKYVYVVTELIKGGKLLDKILRQKFFSEXEASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKQQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGIGKFSLSGGYWNSVSDTAKDLVXPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDALHLVNGATAATYSALNHNQSPVLEPVGRSTLAQRRGIKKITSAAP
SIO_010081: LOC118570648
subclass of: SO_0000673
so part of: LOC118570648
location: 298324..300449
location: region:298324-300449:1
so has part: feature:298324-300449:1:exon

XP_036025204.1
type: Protein
SIO_000068: ncbiprotein

position:298324:1
position: 298324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298324-300449:1:exon

LOC118570214
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(308160..308587)
location: region:308160-308587:-1
so has part: feature:308160-308587:-1:exon

118570214
type: Gene
SIO_000068: ncbigene

position:308160:-1
position: 308160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308587:-1
position: 308587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308160-308587:-1:exon

LOC118570214
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570214
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 49% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118570214
subclass of: SO_0000673
so part of: LOC118570214
location: complement(308160..308587)
location: region:308160-308587:-1
so has part: feature:308160-308587:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308160-308587:-1:exon

LOC118570744
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570744
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(481945..482047)
location: region:481945-482047:-1
so has part: feature:481945-482047:-1:exon
subclass of: SO_0000623

118570744
type: Gene
SIO_000068: ncbigene

position:481945:-1
position: 481945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482047:-1
position: 482047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481945-482047:-1:exon

LOC118570744
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: snRNA
gene: LOC118570744
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004943237.1
SIO_010081: LOC118570744
subclass of: SO_0000673
so part of: LOC118570744
location: complement(481945..482047)
location: region:481945-482047:-1
so has part: feature:481945-482047:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:481945-482047:-1:exon

Sim1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Sim1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(669851..741142)
location: region:669851-741142:-1
so has part: feature:669851-741142:-1:exon
subclass of: SO_0000010

118570697
type: Gene
SIO_000068: ncbigene

position:669851:-1
position: 669851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741142:-1
position: 741142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669851-741142:-1:exon

Sim1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Sim1
product: SIM bHLH transcription factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_036169356.1
SIO_010081: Sim1
subclass of: SO_0000673
so part of: Sim1
location: complement(join(669851..670581,672819..673218,697058..697226,726351..726498,727167..727273,727461..727660,728179..728264,728398..728506,728964..729053,732040..732122,740968..741142))
location: region:669851-741142:-1
so has part: feature:740968-741142:-1:exon
so has part: feature:732040-732122:-1:exon
so has part: feature:728964-729053:-1:exon
so has part: feature:728398-728506:-1:exon
so has part: feature:728179-728264:-1:exon
so has part: feature:727461-727660:-1:exon
so has part: feature:727167-727273:-1:exon
so has part: feature:726351-726498:-1:exon
so has part: feature:697058-697226:-1:exon
so has part: feature:672819-673218:-1:exon
so has part: feature:669851-670581:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:740968-741142:-1:exon

position:740968:-1
position: 740968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:732040-732122:-1:exon

position:732040:-1
position: 732040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732122:-1
position: 732122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:728964-729053:-1:exon

position:728964:-1
position: 728964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729053:-1
position: 729053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:728398-728506:-1:exon

position:728398:-1
position: 728398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728506:-1
position: 728506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:728179-728264:-1:exon

position:728179:-1
position: 728179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728264:-1
position: 728264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:727461-727660:-1:exon

position:727461:-1
position: 727461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727660:-1
position: 727660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:727167-727273:-1:exon

position:727167:-1
position: 727167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727273:-1
position: 727273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:726351-726498:-1:exon

position:726351:-1
position: 726351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726498:-1
position: 726498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:697058-697226:-1:exon

position:697058:-1
position: 697058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697226:-1
position: 697226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:672819-673218:-1:exon

position:672819:-1
position: 672819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673218:-1
position: 673218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:669851-670581:-1:exon

position:670581:-1
position: 670581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sim1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Sim1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: single-minded homolog 1
translation: MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGLGEAWGHTSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEMERSFFLRMKCVLAKRNAGLTCGGYKVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPTFTYASSSTPTITDNRKGAKSRLSNTKSKSRTSPYPQYSGFHTERSESDHDSQWGGSPLTDTASPQLLDPERPVSQHEVSCAYRQFPDRSSLCYGFALDHSRLVDDRHFHTQACEGGRCEAGRYFLGAPPTGRDPWWGSRAALPLTKVSPESRETYENSMPHITSVHRIHGRGHWDEDSVVSSPDPGSASESGDRYRTEQYQNSPHEPSKIETLIRATQQMIKEEENRLQLRKAPPDQLVSINGAGKKHSLCFANYQQAPPAGEVCHSSALASTSPCDHVQQREGKMLSPHDNDYDNSPTALSRISSPSSDRITKSSLILAKDYLHSDMSPHQTTGEHSAISPNCFGSHRQYFDKHAYTLTGYALEHLYDSETIRNYSLGCNGSHFDVTSHLRMQPDSAQGHKGTSVIITNGS
SIO_010081: Sim1
subclass of: SO_0000673
so part of: Sim1
location: complement(join(669851..670581,672819..673218,697058..697226,726351..726498,727167..727273,727461..727660,728179..728264,728398..728506,728964..729053,732040..732122,740968..741142))
location: region:669851-741142:-1
so has part: feature:740968-741142:-1:exon
so has part: feature:732040-732122:-1:exon
so has part: feature:728964-729053:-1:exon
so has part: feature:728398-728506:-1:exon
so has part: feature:728179-728264:-1:exon
so has part: feature:727461-727660:-1:exon
so has part: feature:727167-727273:-1:exon
so has part: feature:726351-726498:-1:exon
so has part: feature:697058-697226:-1:exon
so has part: feature:672819-673218:-1:exon
so has part: feature:669851-670581:-1:exon

XP_036025249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:740968-741142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:732040-732122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:728964-729053:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:728398-728506:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728179-728264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727461-727660:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:727167-727273:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726351-726498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:697058-697226:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:672819-673218:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:669851-670581:-1:exon

Ascc3
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Ascc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(793615..1104413)
location: region:793615-1104413:-1
so has part: feature:793615-1104413:-1:exon
subclass of: SO_0000010

118570272
type: Gene
SIO_000068: ncbigene

position:793615:-1
position: 793615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104413:-1
position: 1104413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793615-1104413:-1:exon

Ascc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ascc3
product: activating signal cointegrator 1 complex subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_036168670.1
SIO_010081: Ascc3
subclass of: SO_0000673
so part of: Ascc3
location: complement(join(793615..794375,794702..794877,801265..801474,805559..805706,807294..807445,824994..825218,876428..876562,876715..876826,887992..888117,894285..894417,895582..895702,895798..895935,915353..915495,918816..918936,919056..919201,919951..920117,921662..921747,924573..924793,927380..927548,928635..928733,931030..931184,932769..932994,934730..934906,935900..935986,938124..938288,942300..942419,949979..950203,950506..950697,959582..959716,979210..979281,981943..982119,986085..986249,1013275..1013415,1013888..1014088,1022438..1022563,1023468..1023609,1024358..1024565,1030661..1030781,1071084..1071643,1086909..1087059,1090100..1090230,1104195..1104413))
location: region:793615-1104413:-1
so has part: feature:1104195-1104413:-1:exon
so has part: feature:1090100-1090230:-1:exon
so has part: feature:1086909-1087059:-1:exon
so has part: feature:1071084-1071643:-1:exon
so has part: feature:1030661-1030781:-1:exon
so has part: feature:1024358-1024565:-1:exon
so has part: feature:1023468-1023609:-1:exon
so has part: feature:1022438-1022563:-1:exon
so has part: feature:1013888-1014088:-1:exon
so has part: feature:1013275-1013415:-1:exon
so has part: feature:986085-986249:-1:exon
so has part: feature:981943-982119:-1:exon
so has part: feature:979210-979281:-1:exon
so has part: feature:959582-959716:-1:exon
so has part: feature:950506-950697:-1:exon
so has part: feature:949979-950203:-1:exon
so has part: feature:942300-942419:-1:exon
so has part: feature:938124-938288:-1:exon
so has part: feature:935900-935986:-1:exon
so has part: feature:934730-934906:-1:exon
so has part: feature:932769-932994:-1:exon
so has part: feature:931030-931184:-1:exon
so has part: feature:928635-928733:-1:exon
so has part: feature:927380-927548:-1:exon
so has part: feature:924573-924793:-1:exon
so has part: feature:921662-921747:-1:exon
so has part: feature:919951-920117:-1:exon
so has part: feature:919056-919201:-1:exon
so has part: feature:918816-918936:-1:exon
so has part: feature:915353-915495:-1:exon
so has part: feature:895798-895935:-1:exon
so has part: feature:895582-895702:-1:exon
so has part: feature:894285-894417:-1:exon
so has part: feature:887992-888117:-1:exon
so has part: feature:876715-876826:-1:exon
so has part: feature:876428-876562:-1:exon
so has part: feature:824994-825218:-1:exon
so has part: feature:807294-807445:-1:exon
so has part: feature:805559-805706:-1:exon
so has part: feature:801265-801474:-1:exon
so has part: feature:794702-794877:-1:exon
so has part: feature:793615-794375:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1104195-1104413:-1:exon

position:1104195:-1
position: 1104195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1090100-1090230:-1:exon

position:1090100:-1
position: 1090100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090230:-1
position: 1090230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1086909-1087059:-1:exon

position:1086909:-1
position: 1086909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087059:-1
position: 1087059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1071084-1071643:-1:exon

position:1071084:-1
position: 1071084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071643:-1
position: 1071643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1030661-1030781:-1:exon

position:1030661:-1
position: 1030661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030781:-1
position: 1030781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1024358-1024565:-1:exon

position:1024358:-1
position: 1024358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024565:-1
position: 1024565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1023468-1023609:-1:exon

position:1023468:-1
position: 1023468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023609:-1
position: 1023609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1022438-1022563:-1:exon

position:1022438:-1
position: 1022438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022563:-1
position: 1022563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1013888-1014088:-1:exon

position:1013888:-1
position: 1013888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014088:-1
position: 1014088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1013275-1013415:-1:exon

position:1013275:-1
position: 1013275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013415:-1
position: 1013415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:986085-986249:-1:exon

position:986085:-1
position: 986085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986249:-1
position: 986249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:981943-982119:-1:exon

position:981943:-1
position: 981943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982119:-1
position: 982119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:979210-979281:-1:exon

position:979210:-1
position: 979210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979281:-1
position: 979281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:959582-959716:-1:exon

position:959582:-1
position: 959582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959716:-1
position: 959716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:950506-950697:-1:exon

position:950506:-1
position: 950506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950697:-1
position: 950697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:949979-950203:-1:exon

position:949979:-1
position: 949979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950203:-1
position: 950203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:942300-942419:-1:exon

position:942300:-1
position: 942300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942419:-1
position: 942419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:938124-938288:-1:exon

position:938124:-1
position: 938124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938288:-1
position: 938288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:935900-935986:-1:exon

position:935900:-1
position: 935900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935986:-1
position: 935986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:934730-934906:-1:exon

position:934730:-1
position: 934730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934906:-1
position: 934906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:932769-932994:-1:exon

position:932769:-1
position: 932769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932994:-1
position: 932994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:931030-931184:-1:exon

position:931030:-1
position: 931030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931184:-1
position: 931184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:928635-928733:-1:exon

position:928635:-1
position: 928635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928733:-1
position: 928733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:927380-927548:-1:exon

position:927380:-1
position: 927380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927548:-1
position: 927548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:924573-924793:-1:exon

position:924573:-1
position: 924573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:924793:-1
position: 924793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:921662-921747:-1:exon

position:921662:-1
position: 921662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921747:-1
position: 921747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:919951-920117:-1:exon

position:919951:-1
position: 919951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920117:-1
position: 920117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:919056-919201:-1:exon

position:919056:-1
position: 919056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919201:-1
position: 919201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:918816-918936:-1:exon

position:918816:-1
position: 918816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918936:-1
position: 918936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:915353-915495:-1:exon

position:915353:-1
position: 915353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915495:-1
position: 915495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:895798-895935:-1:exon

position:895798:-1
position: 895798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895935:-1
position: 895935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:895582-895702:-1:exon

position:895582:-1
position: 895582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895702:-1
position: 895702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:894285-894417:-1:exon

position:894285:-1
position: 894285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894417:-1
position: 894417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:887992-888117:-1:exon

position:887992:-1
position: 887992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888117:-1
position: 888117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:876715-876826:-1:exon

position:876715:-1
position: 876715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876826:-1
position: 876826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:876428-876562:-1:exon

position:876428:-1
position: 876428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876562:-1
position: 876562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:824994-825218:-1:exon

position:824994:-1
position: 824994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825218:-1
position: 825218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:807294-807445:-1:exon

position:807294:-1
position: 807294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807445:-1
position: 807445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:805559-805706:-1:exon

position:805559:-1
position: 805559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805706:-1
position: 805706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:801265-801474:-1:exon

position:801265:-1
position: 801265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801474:-1
position: 801474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:794702-794877:-1:exon

position:794702:-1
position: 794702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794877:-1
position: 794877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:793615-794375:-1:exon

position:794375:-1
position: 794375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ascc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ascc3
product: activating signal cointegrator 1 complex subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036168671.1
SIO_010081: Ascc3
subclass of: SO_0000673
so part of: Ascc3
location: complement(join(793615..794375,794702..794877,801265..801474,805559..805706,807294..807445,824994..825218,876428..876562,876715..876826,887992..888117,894285..894417,895582..895702,895798..895935,915353..915495,918816..918936,919056..919201,919951..920117,921662..921747,924573..924793,927380..927548,928635..928733,931030..931184,932769..932994,934730..934906,935900..935986,938124..938288,942300..942419,949979..950203,950506..950697,959582..959716,979210..979281,981943..982119,986085..986249,1013275..1013415,1013888..1014088,1022438..1022563,1023468..1023609,1024358..1024565,1030661..1030781,1071084..1071643,1086909..1087059,1090059..1090099))
location: region:793615-1090099:-1
so has part: feature:1090059-1090099:-1:exon
so has part: feature:1086909-1087059:-1:exon
so has part: feature:1071084-1071643:-1:exon
so has part: feature:1030661-1030781:-1:exon
so has part: feature:1024358-1024565:-1:exon
so has part: feature:1023468-1023609:-1:exon
so has part: feature:1022438-1022563:-1:exon
so has part: feature:1013888-1014088:-1:exon
so has part: feature:1013275-1013415:-1:exon
so has part: feature:986085-986249:-1:exon
so has part: feature:981943-982119:-1:exon
so has part: feature:979210-979281:-1:exon
so has part: feature:959582-959716:-1:exon
so has part: feature:950506-950697:-1:exon
so has part: feature:949979-950203:-1:exon
so has part: feature:942300-942419:-1:exon
so has part: feature:938124-938288:-1:exon
so has part: feature:935900-935986:-1:exon
so has part: feature:934730-934906:-1:exon
so has part: feature:932769-932994:-1:exon
so has part: feature:931030-931184:-1:exon
so has part: feature:928635-928733:-1:exon
so has part: feature:927380-927548:-1:exon
so has part: feature:924573-924793:-1:exon
so has part: feature:921662-921747:-1:exon
so has part: feature:919951-920117:-1:exon
so has part: feature:919056-919201:-1:exon
so has part: feature:918816-918936:-1:exon
so has part: feature:915353-915495:-1:exon
so has part: feature:895798-895935:-1:exon
so has part: feature:895582-895702:-1:exon
so has part: feature:894285-894417:-1:exon
so has part: feature:887992-888117:-1:exon
so has part: feature:876715-876826:-1:exon
so has part: feature:876428-876562:-1:exon
so has part: feature:824994-825218:-1:exon
so has part: feature:807294-807445:-1:exon
so has part: feature:805559-805706:-1:exon
so has part: feature:801265-801474:-1:exon
so has part: feature:794702-794877:-1:exon
so has part: feature:793615-794375:-1:exon

position:1090099:-1
position: 1090099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1090059-1090099:-1:exon

position:1090059:-1
position: 1090059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1086909-1087059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1071084-1071643:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030661-1030781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024358-1024565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1023468-1023609:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022438-1022563:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1013888-1014088:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1013275-1013415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986085-986249:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:981943-982119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:979210-979281:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:959582-959716:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:950506-950697:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:949979-950203:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:942300-942419:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:938124-938288:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:935900-935986:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:934730-934906:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:932769-932994:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:931030-931184:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:928635-928733:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:927380-927548:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:924573-924793:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:921662-921747:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:919951-920117:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:919056-919201:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:918816-918936:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:915353-915495:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:895798-895935:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:895582-895702:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:894285-894417:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:887992-888117:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:876715-876826:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:876428-876562:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:824994-825218:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:807294-807445:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:805559-805706:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:801265-801474:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:794702-794877:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:793615-794375:-1:exon

Ascc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ascc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activating signal cointegrator 1 complex subunit 3 isoform X1
translation: MALPRLTGALRSFSNVTKQDNYNEEVADLKLKRSKLHEQVLDLGLTWKKIVNFLNEKLEKNKMQSINEDLKDILQAAKQIVGTDNGREAIESGAAFLFMTFHLTDSVGHTETKAIRQMFGPFPSSSATAACNATNRIISHFSQDDLTALVQMAENECSDVVFFGKNLAFSFDMHDLDHFDELPINGEAQKTITLDYKKFLNEHFQEHYTPELKPVEKTNGSFLWCEVEKYLNATLKEMTEAPRIEDLCCTLYDMLASVKSGDELQNELFELLGPEGLDLIEKLLQNRITIVDRFLNSSTDHKFHALQDSCKKFLGENTKPNYGCQVTIQSEQEKQLMKQFRREEKRIARREKKAGEDGEVPGEGLLSFDPKELRIHREQALMNARSTPVLSRQRDMEVEKIHYPHVYDSQAEARETSAFIAGAKMILPEGIQRENTKLYEEVRIPYSEPMPVGFEEKPVYIQDLDEIGQLAFKGMKRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPMKALAAEMTNYFSKRLEPLGIIVKELTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVPLGQTFLGIKSANKMQQLNNMDEVCYESVWKQVKAGHQVMVFVHARNATVRTAMSLIERAKNSGQISYFLPTQGPEYGHALKQVQKSRNKQVRELFSEGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFIDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAYGISHKAYQMDPTLRKHREQLVIEVGQKLDKAKMIRFEERTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDIFAIVSKAEEFDQIKVREEEVEELDALLNNFCELSAPGGVENSYGKINILLQTYISRGEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPTMTYRLLNLSKVIDKRLWGWASPLRQFSVLPPHILTRLEEKNLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEASIQPITRTVLRVSLNIHPDFSWSDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLALKKQVINKEAQLLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPVTALGCKAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMDDWKIRIEEKLGKKVIELTGDVTPDMKSIAQADLIVTTPEKWDGVSRSWQNRNYVQQVTILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSHSPAKPVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMDEQEMENIIGTIRDSNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYSLGDVSQDSMNKFLSHLIEKSLVELELSHCIEVGEDNRSIEPLACGRIASYYYLKHKTVKMFKDRLKPECNTEELLSILSDAEEYTDLPVRHNEDHTNSELAKCLPIELNPHSFDSPHTKAHLLLQAHLSRAMLPCPDYDTDTKTVLDQALRVCQAMLDVAASQGWLVTALNITHLVQMVIQGRWLKDSSLLTIPNIEQHHLHLFRKWKPPIKGPHAKCRTSIECLPEL…
SIO_010081: Ascc3
subclass of: SO_0000673
so part of: Ascc3
location: complement(join(794207..794375,794702..794877,801265..801474,805559..805706,807294..807445,824994..825218,876428..876562,876715..876826,887992..888117,894285..894417,895582..895702,895798..895935,915353..915495,918816..918936,919056..919201,919951..920117,921662..921747,924573..924793,927380..927548,928635..928733,931030..931184,932769..932994,934730..934906,935900..935986,938124..938288,942300..942419,949979..950203,950506..950697,959582..959716,979210..979281,981943..982119,986085..986249,1013275..1013415,1013888..1014088,1022438..1022563,1023468..1023609,1024358..1024565,1030661..1030781,1071084..1071643,1086909..1087059,1090100..1090189))
location: region:794207-1090189:-1
so has part: feature:1090100-1090189:-1:exon
so has part: feature:1086909-1087059:-1:exon
so has part: feature:1071084-1071643:-1:exon
so has part: feature:1030661-1030781:-1:exon
so has part: feature:1024358-1024565:-1:exon
so has part: feature:1023468-1023609:-1:exon
so has part: feature:1022438-1022563:-1:exon
so has part: feature:1013888-1014088:-1:exon
so has part: feature:1013275-1013415:-1:exon
so has part: feature:986085-986249:-1:exon
so has part: feature:981943-982119:-1:exon
so has part: feature:979210-979281:-1:exon
so has part: feature:959582-959716:-1:exon
so has part: feature:950506-950697:-1:exon
so has part: feature:949979-950203:-1:exon
so has part: feature:942300-942419:-1:exon
so has part: feature:938124-938288:-1:exon
so has part: feature:935900-935986:-1:exon
so has part: feature:934730-934906:-1:exon
so has part: feature:932769-932994:-1:exon
so has part: feature:931030-931184:-1:exon
so has part: feature:928635-928733:-1:exon
so has part: feature:927380-927548:-1:exon
so has part: feature:924573-924793:-1:exon
so has part: feature:921662-921747:-1:exon
so has part: feature:919951-920117:-1:exon
so has part: feature:919056-919201:-1:exon
so has part: feature:918816-918936:-1:exon
so has part: feature:915353-915495:-1:exon
so has part: feature:895798-895935:-1:exon
so has part: feature:895582-895702:-1:exon
so has part: feature:894285-894417:-1:exon
so has part: feature:887992-888117:-1:exon
so has part: feature:876715-876826:-1:exon
so has part: feature:876428-876562:-1:exon
so has part: feature:824994-825218:-1:exon
so has part: feature:807294-807445:-1:exon
so has part: feature:805559-805706:-1:exon
so has part: feature:801265-801474:-1:exon
so has part: feature:794702-794877:-1:exon
so has part: feature:794207-794375:-1:exon

XP_036024563.1
type: Protein
SIO_000068: ncbiprotein

position:794207:-1
position: 794207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090189:-1
position: 1090189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1090100-1090189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1086909-1087059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1071084-1071643:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030661-1030781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024358-1024565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1023468-1023609:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022438-1022563:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1013888-1014088:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1013275-1013415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986085-986249:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:981943-982119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:979210-979281:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:959582-959716:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:950506-950697:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:949979-950203:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:942300-942419:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:938124-938288:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:935900-935986:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:934730-934906:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:932769-932994:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:931030-931184:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:928635-928733:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:927380-927548:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:924573-924793:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:921662-921747:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:919951-920117:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:919056-919201:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:918816-918936:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:915353-915495:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:895798-895935:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:895582-895702:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:894285-894417:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:887992-888117:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:876715-876826:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:876428-876562:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:824994-825218:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:807294-807445:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:805559-805706:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:801265-801474:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:794702-794877:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:794207-794375:-1:exon

Ascc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ascc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activating signal cointegrator 1 complex subunit 3 isoform X2
translation: MQSINEDLKDILQAAKQIVGTDNGREAIESGAAFLFMTFHLTDSVGHTETKAIRQMFGPFPSSSATAACNATNRIISHFSQDDLTALVQMAENECSDVVFFGKNLAFSFDMHDLDHFDELPINGEAQKTITLDYKKFLNEHFQEHYTPELKPVEKTNGSFLWCEVEKYLNATLKEMTEAPRIEDLCCTLYDMLASVKSGDELQNELFELLGPEGLDLIEKLLQNRITIVDRFLNSSTDHKFHALQDSCKKFLGENTKPNYGCQVTIQSEQEKQLMKQFRREEKRIARREKKAGEDGEVPGEGLLSFDPKELRIHREQALMNARSTPVLSRQRDMEVEKIHYPHVYDSQAEARETSAFIAGAKMILPEGIQRENTKLYEEVRIPYSEPMPVGFEEKPVYIQDLDEIGQLAFKGMKRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPMKALAAEMTNYFSKRLEPLGIIVKELTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVPLGQTFLGIKSANKMQQLNNMDEVCYESVWKQVKAGHQVMVFVHARNATVRTAMSLIERAKNSGQISYFLPTQGPEYGHALKQVQKSRNKQVRELFSEGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFIDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAYGISHKAYQMDPTLRKHREQLVIEVGQKLDKAKMIRFEERTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDIFAIVSKAEEFDQIKVREEEVEELDALLNNFCELSAPGGVENSYGKINILLQTYISRGEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPTMTYRLLNLSKVIDKRLWGWASPLRQFSVLPPHILTRLEEKNLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEASIQPITRTVLRVSLNIHPDFSWSDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLALKKQVINKEAQLLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPVTALGCKAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMDDWKIRIEEKLGKKVIELTGDVTPDMKSIAQADLIVTTPEKWDGVSRSWQNRNYVQQVTILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSHSPAKPVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMDEQEMENIIGTIRDSNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYSLGDVSQDSMNKFLSHLIEKSLVELELSHCIEVGEDNRSIEPLACGRIASYYYLKHKTVKMFKDRLKPECNTEELLSILSDAEEYTDLPVRHNEDHTNSELAKCLPIELNPHSFDSPHTKAHLLLQAHLSRAMLPCPDYDTDTKTVLDQALRVCQAMLDVAASQGWLVTALNITHLVQMVIQGRWLKDSSLLTIPNIEQHHLHLFRKWKPPIKGPHAKCRTSIECLPELIHACEGKDYVFSSMVENELQSAKAKQAWNFLSRLPVISVGISVKGSWDDLVEGHNELSISAL…
SIO_010081: Ascc3
subclass of: SO_0000673
so part of: Ascc3
location: complement(join(794207..794375,794702..794877,801265..801474,805559..805706,807294..807445,824994..825218,876428..876562,876715..876826,887992..888117,894285..894417,895582..895702,895798..895935,915353..915495,918816..918936,919056..919201,919951..920117,921662..921747,924573..924793,927380..927548,928635..928733,931030..931184,932769..932994,934730..934906,935900..935986,938124..938288,942300..942419,949979..950203,950506..950697,959582..959716,979210..979281,981943..982119,986085..986249,1013275..1013415,1013888..1014088,1022438..1022563,1023468..1023609,1024358..1024565,1030661..1030781,1071084..1071643,1086909..1086963))
location: region:794207-1086963:-1
so has part: feature:1086909-1086963:-1:exon
so has part: feature:1071084-1071643:-1:exon
so has part: feature:1030661-1030781:-1:exon
so has part: feature:1024358-1024565:-1:exon
so has part: feature:1023468-1023609:-1:exon
so has part: feature:1022438-1022563:-1:exon
so has part: feature:1013888-1014088:-1:exon
so has part: feature:1013275-1013415:-1:exon
so has part: feature:986085-986249:-1:exon
so has part: feature:981943-982119:-1:exon
so has part: feature:979210-979281:-1:exon
so has part: feature:959582-959716:-1:exon
so has part: feature:950506-950697:-1:exon
so has part: feature:949979-950203:-1:exon
so has part: feature:942300-942419:-1:exon
so has part: feature:938124-938288:-1:exon
so has part: feature:935900-935986:-1:exon
so has part: feature:934730-934906:-1:exon
so has part: feature:932769-932994:-1:exon
so has part: feature:931030-931184:-1:exon
so has part: feature:928635-928733:-1:exon
so has part: feature:927380-927548:-1:exon
so has part: feature:924573-924793:-1:exon
so has part: feature:921662-921747:-1:exon
so has part: feature:919951-920117:-1:exon
so has part: feature:919056-919201:-1:exon
so has part: feature:918816-918936:-1:exon
so has part: feature:915353-915495:-1:exon
so has part: feature:895798-895935:-1:exon
so has part: feature:895582-895702:-1:exon
so has part: feature:894285-894417:-1:exon
so has part: feature:887992-888117:-1:exon
so has part: feature:876715-876826:-1:exon
so has part: feature:876428-876562:-1:exon
so has part: feature:824994-825218:-1:exon
so has part: feature:807294-807445:-1:exon
so has part: feature:805559-805706:-1:exon
so has part: feature:801265-801474:-1:exon
so has part: feature:794702-794877:-1:exon
so has part: feature:794207-794375:-1:exon

XP_036024564.1
type: Protein
SIO_000068: ncbiprotein

position:1086963:-1
position: 1086963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1086909-1086963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1071084-1071643:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1030661-1030781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024358-1024565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1023468-1023609:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1022438-1022563:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1013888-1014088:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1013275-1013415:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986085-986249:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:981943-982119:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:979210-979281:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:959582-959716:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:950506-950697:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:949979-950203:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:942300-942419:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:938124-938288:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:935900-935986:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:934730-934906:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:932769-932994:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:931030-931184:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:928635-928733:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:927380-927548:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:924573-924793:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:921662-921747:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:919951-920117:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:919056-919201:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:918816-918936:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:915353-915495:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:895798-895935:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:895582-895702:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:894285-894417:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:887992-888117:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:876715-876826:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:876428-876562:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:824994-825218:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:807294-807445:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:805559-805706:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:801265-801474:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:794702-794877:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:794207-794375:-1:exon

Ascc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ascc3
product: activating signal cointegrator 1 complex subunit 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036168672.1
SIO_010081: Ascc3
subclass of: SO_0000673
so part of: Ascc3
location: complement(join(871240..871282,876428..876562,876715..876826,887992..888117,894285..894417,895582..895702,895798..895935,915353..915495,918816..918936,919056..919201,919951..920117,921662..921747,924573..924793,927380..927548,928635..928733,931030..931184,932769..932994,934730..934906,935900..935986,938124..938288,942300..942419,949979..950203,950506..950697,959582..959716,979210..979281,981943..982119,986085..986249,1013275..1013415,1013888..1014088,1022438..1022563,1023468..1023609,1024358..1024565,1030661..1030781,1071084..1071643,1086909..1087059,1090100..1090230,1104195..1104413))
location: region:871240-1104413:-1
so has part: feature:1104195-1104413:-1:exon
so has part: feature:1090100-1090230:-1:exon
so has part: feature:1086909-1087059:-1:exon
so has part: feature:1071084-1071643:-1:exon
so has part: feature:1030661-1030781:-1:exon
so has part: feature:1024358-1024565:-1:exon
so has part: feature:1023468-1023609:-1:exon
so has part: feature:1022438-1022563:-1:exon
so has part: feature:1013888-1014088:-1:exon
so has part: feature:1013275-1013415:-1:exon
so has part: feature:986085-986249:-1:exon
so has part: feature:981943-982119:-1:exon
so has part: feature:979210-979281:-1:exon
so has part: feature:959582-959716:-1:exon
so has part: feature:950506-950697:-1:exon
so has part: feature:949979-950203:-1:exon
so has part: feature:942300-942419:-1:exon
so has part: feature:938124-938288:-1:exon
so has part: feature:935900-935986:-1:exon
so has part: feature:934730-934906:-1:exon
so has part: feature:932769-932994:-1:exon
so has part: feature:931030-931184:-1:exon
so has part: feature:928635-928733:-1:exon
so has part: feature:927380-927548:-1:exon
so has part: feature:924573-924793:-1:exon
so has part: feature:921662-921747:-1:exon
so has part: feature:919951-920117:-1:exon
so has part: feature:919056-919201:-1:exon
so has part: feature:918816-918936:-1:exon
so has part: feature:915353-915495:-1:exon
so has part: feature:895798-895935:-1:exon
so has part: feature:895582-895702:-1:exon
so has part: feature:894285-894417:-1:exon
so has part: feature:887992-888117:-1:exon
so has part: feature:876715-876826:-1:exon
so has part: feature:876428-876562:-1:exon
so has part: feature:871240-871282:-1:exon

position:871240:-1
position: 871240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104195-1104413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1090100-1090230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1086909-1087059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1071084-1071643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1030661-1030781:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1024358-1024565:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1023468-1023609:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1022438-1022563:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1013888-1014088:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1013275-1013415:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986085-986249:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:981943-982119:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:979210-979281:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:959582-959716:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:950506-950697:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:949979-950203:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:942300-942419:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:938124-938288:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:935900-935986:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:934730-934906:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:932769-932994:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:931030-931184:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:928635-928733:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:927380-927548:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:924573-924793:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:921662-921747:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:919951-920117:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:919056-919201:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:918816-918936:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:915353-915495:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:895798-895935:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:895582-895702:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:894285-894417:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:887992-888117:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:876715-876826:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:876428-876562:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:871240-871282:-1:exon

position:871282:-1
position: 871282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ascc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ascc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activating signal cointegrator 1 complex subunit 3 isoform X3
translation: MALPRLTGALRSFSNVTKQDNYNEEVADLKLKRSKLHEQVLDLGLTWKKIVNFLNEKLEKNKMQSINEDLKDILQAAKQIVGTDNGREAIESGAAFLFMTFHLTDSVGHTETKAIRQMFGPFPSSSATAACNATNRIISHFSQDDLTALVQMAENECSDVVFFGKNLAFSFDMHDLDHFDELPINGEAQKTITLDYKKFLNEHFQEHYTPELKPVEKTNGSFLWCEVEKYLNATLKEMTEAPRIEDLCCTLYDMLASVKSGDELQNELFELLGPEGLDLIEKLLQNRITIVDRFLNSSTDHKFHALQDSCKKFLGENTKPNYGCQVTIQSEQEKQLMKQFRREEKRIARREKKAGEDGEVPGEGLLSFDPKELRIHREQALMNARSTPVLSRQRDMEVEKIHYPHVYDSQAEARETSAFIAGAKMILPEGIQRENTKLYEEVRIPYSEPMPVGFEEKPVYIQDLDEIGQLAFKGMKRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPMKALAAEMTNYFSKRLEPLGIIVKELTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVPLGQTFLGIKSANKMQQLNNMDEVCYESVWKQVKAGHQVMVFVHARNATVRTAMSLIERAKNSGQISYFLPTQGPEYGHALKQVQKSRNKQVRELFSEGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFIDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAYGISHKAYQMDPTLRKHREQLVIEVGQKLDKAKMIRFEERTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDIFAIVSKAEEFDQIKVREEEVEELDALLNNFCELSAPGGVENSYGKINILLQTYISRGEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPTMTYRLLNLSKVIDKRLWGWASPLRQFSVLPPHILTRLEEKNLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEASIQPITRTVLRVSLNIHPDFSWSDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLALKKQVINKEAQLLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPVTALGCKAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMDDWKIRIEEKLGKKVIELTGDVTPDMKSIAQADLIVTTPEKWDGVSRSWQNRNYVQQVTILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSHSPAKPVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMDEQEMENIIGTIRDSNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYSLGDVSQDSMNKFLSHLIEKSLVELELSHCIEVGEDNRSIEPLACGRIASYYYLKHKTVKMFKDRLKPECNTEELLSILSIYKLSSTK
SIO_010081: Ascc3
subclass of: SO_0000673
so part of: Ascc3
location: complement(join(871256..871282,876428..876562,876715..876826,887992..888117,894285..894417,895582..895702,895798..895935,915353..915495,918816..918936,919056..919201,919951..920117,921662..921747,924573..924793,927380..927548,928635..928733,931030..931184,932769..932994,934730..934906,935900..935986,938124..938288,942300..942419,949979..950203,950506..950697,959582..959716,979210..979281,981943..982119,986085..986249,1013275..1013415,1013888..1014088,1022438..1022563,1023468..1023609,1024358..1024565,1030661..1030781,1071084..1071643,1086909..1087059,1090100..1090189))
location: region:871256-1090189:-1
so has part: feature:1090100-1090189:-1:exon
so has part: feature:1086909-1087059:-1:exon
so has part: feature:1071084-1071643:-1:exon
so has part: feature:1030661-1030781:-1:exon
so has part: feature:1024358-1024565:-1:exon
so has part: feature:1023468-1023609:-1:exon
so has part: feature:1022438-1022563:-1:exon
so has part: feature:1013888-1014088:-1:exon
so has part: feature:1013275-1013415:-1:exon
so has part: feature:986085-986249:-1:exon
so has part: feature:981943-982119:-1:exon
so has part: feature:979210-979281:-1:exon
so has part: feature:959582-959716:-1:exon
so has part: feature:950506-950697:-1:exon
so has part: feature:949979-950203:-1:exon
so has part: feature:942300-942419:-1:exon
so has part: feature:938124-938288:-1:exon
so has part: feature:935900-935986:-1:exon
so has part: feature:934730-934906:-1:exon
so has part: feature:932769-932994:-1:exon
so has part: feature:931030-931184:-1:exon
so has part: feature:928635-928733:-1:exon
so has part: feature:927380-927548:-1:exon
so has part: feature:924573-924793:-1:exon
so has part: feature:921662-921747:-1:exon
so has part: feature:919951-920117:-1:exon
so has part: feature:919056-919201:-1:exon
so has part: feature:918816-918936:-1:exon
so has part: feature:915353-915495:-1:exon
so has part: feature:895798-895935:-1:exon
so has part: feature:895582-895702:-1:exon
so has part: feature:894285-894417:-1:exon
so has part: feature:887992-888117:-1:exon
so has part: feature:876715-876826:-1:exon
so has part: feature:876428-876562:-1:exon
so has part: feature:871256-871282:-1:exon

XP_036024565.1
type: Protein
SIO_000068: ncbiprotein

position:871256:-1
position: 871256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1090100-1090189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1086909-1087059:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1071084-1071643:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030661-1030781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1024358-1024565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1023468-1023609:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022438-1022563:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1013888-1014088:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1013275-1013415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986085-986249:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:981943-982119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:979210-979281:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:959582-959716:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:950506-950697:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:949979-950203:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:942300-942419:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:938124-938288:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:935900-935986:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:934730-934906:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:932769-932994:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:931030-931184:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:928635-928733:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:927380-927548:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:924573-924793:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:921662-921747:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:919951-920117:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:919056-919201:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:918816-918936:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:915353-915495:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:895798-895935:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:895582-895702:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:894285-894417:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:887992-888117:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:876715-876826:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:876428-876562:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:871256-871282:-1:exon

LOC118570649
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570649
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1103901..1131316
location: region:1103901-1131316:1
so has part: feature:1103901-1131316:1:exon
subclass of: SO_0000010

118570649
type: Gene
SIO_000068: ncbigene

position:1103901:1
position: 1103901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131316:1
position: 1131316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103901-1131316:1:exon

LOC118570649
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118570649
product: uncharacterized LOC118570649
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036169312.1
SIO_010081: LOC118570649
subclass of: SO_0000673
so part of: LOC118570649
location: join(1103901..1103919,1104145..1104688,1130052..1131316)
location: region:1103901-1131316:1
so has part: feature:1103901-1103919:1:exon
so has part: feature:1104145-1104688:1:exon
so has part: feature:1130052-1131316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1103901-1103919:1:exon

position:1103919:1
position: 1103919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1104145-1104688:1:exon

position:1104145:1
position: 1104145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104688:1
position: 1104688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1130052-1131316:1:exon

position:1130052:1
position: 1130052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118570649
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118570649
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118570649
translation: MTLPRLSRPHTPARPPAPSSLAHLSPAAAHASGLLEVCFLFPLERSRELRSALLRSPRGRAGVARYHGAAPGGARLGLTHRPTDRRGGTKRSGAGAGDTSPAATPASTRQLLSAVGPPTLGPAHPGSVCRPAGVGRDVSLPLSAWPALVGEPPTPTSSPAHLLITAWEDTTVSQSSRGPYKVPPACSRYHMLDVAKSLDPGYTIQNKTALETASFRKKQQSMSGCSSQVSTTDTCGVS
SIO_010081: LOC118570649
subclass of: SO_0000673
so part of: LOC118570649
location: join(1103901..1103919,1104145..1104688,1130052..1130205)
location: region:1103901-1130205:1
so has part: feature:1103901-1103919:1:exon
so has part: feature:1104145-1104688:1:exon
so has part: feature:1130052-1130205:1:exon

XP_036025205.1
type: Protein
SIO_000068: ncbiprotein

position:1130205:1
position: 1130205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103901-1103919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104145-1104688:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1130052-1130205:1:exon

LOC118570623
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1164988..1166273)
location: region:1164988-1166273:-1
so has part: feature:1164988-1166273:-1:exon

118570623
type: Gene
SIO_000068: ncbigene

position:1164988:-1
position: 1164988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166273:-1
position: 1166273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164988-1166273:-1:exon

LOC118570623
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570623
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
pseudo: true
SIO_010081: LOC118570623
subclass of: SO_0000673
so part of: LOC118570623
location: complement(1164988..1166273)
location: region:1164988-1166273:-1
so has part: feature:1164988-1166273:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1164988-1166273:-1:exon

Trnak-cuu
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Trnak-cuu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1325439..1325511
location: region:1325439-1325511:1
so has part: feature:1325439-1325511:1:exon
subclass of: SO_0000663

118570768
type: Gene
SIO_000068: ncbigene

position:1325439:1
position: 1325439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325511:1
position: 1325511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1325439-1325511:1:exon

Trnak-cuu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 38674
gene: Trnak-cuu
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1325472..1325474,aa:Lys,seq:ctt)
SIO_010081: Trnak-cuu
subclass of: SO_0000673
so part of: Trnak-cuu
location: 1325439..1325511
location: region:1325439-1325511:1
so has part: feature:1325439-1325511:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1325439-1325511:1:exon

LOC118570652
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1466066..1471997
location: region:1466066-1471997:1
so has part: feature:1466066-1471997:1:exon

118570652
type: Gene
SIO_000068: ncbigene

position:1466066:1
position: 1466066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471997:1
position: 1471997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466066-1471997:1:exon

LOC118570652
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570652
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118570652
subclass of: SO_0000673
so part of: LOC118570652
location: 1466066..1468012
location: region:1466066-1468012:1
so has part: feature:1466066-1468012:1:exon

position:1468012:1
position: 1468012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1466066-1468012:1:exon

LOC118570652
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570652
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118570652
subclass of: SO_0000673
so part of: LOC118570652
location: 1471202..1471997
location: region:1471202-1471997:1
so has part: feature:1471202-1471997:1:exon

position:1471202:1
position: 1471202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471202-1471997:1:exon

LOC118570733
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570733
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 1484430..1484522
location: region:1484430-1484522:1
so has part: feature:1484430-1484522:1:exon

118570733
type: Gene
SIO_000068: ncbigene

position:1484430:1
position: 1484430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484522:1
position: 1484522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1484430-1484522:1:exon

LOC118570733
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570733
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118570733
subclass of: SO_0000673
so part of: LOC118570733
location: 1484430..1484522
location: region:1484430-1484522:1
so has part: feature:1484430-1484522:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1484430-1484522:1:exon

LOC118570657
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570657
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1586519..1587004)
location: region:1586519-1587004:-1
so has part: feature:1586519-1587004:-1:exon
subclass of: SO_0000010

118570657
type: Gene
SIO_000068: ncbigene

position:1586519:-1
position: 1586519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1587004:-1
position: 1587004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1586519-1587004:-1:exon

LOC118570657
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118570657
product: proline-rich nuclear receptor coactivator 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036169317.1
SIO_010081: LOC118570657
subclass of: SO_0000673
so part of: LOC118570657
location: complement(1586519..1587004)
location: region:1586519-1587004:-1
so has part: feature:1586519-1587004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1586519-1587004:-1:exon

LOC118570657
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118570657
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich nuclear receptor coactivator 2-like
translation: MGGGEGYNIPAPQSRNVSKNQQQHNRQKTKDQNSQMKIVHKKKERGHGFTPLAAAWQAMQNGGKNKSLSNNPNWNASLSSLSLLFKSQVNQNYAGAKFSEPPSPSVLPKPPSHWVPVSLNPSDKEIMTFQLKTLLKVQV
SIO_010081: LOC118570657
subclass of: SO_0000673
so part of: LOC118570657
location: complement(1586533..1586952)
location: region:1586533-1586952:-1
so has part: feature:1586533-1586952:-1:exon

XP_036025210.1
type: Protein
SIO_000068: ncbiprotein

position:1586533:-1
position: 1586533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1586952:-1
position: 1586952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1586533-1586952:-1:exon

Grik2
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Grik2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1867344..2492048
location: region:1867344-2492048:1
so has part: feature:1867344-2492048:1:exon
subclass of: SO_0000010

118570430
type: Gene
SIO_000068: ncbigene

position:1867344:1
position: 1867344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2492048:1
position: 2492048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1867344-2492048:1:exon

Grik2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Grik2
product: glutamate ionotropic receptor kainate type subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_036168913.1
SIO_010081: Grik2
subclass of: SO_0000673
so part of: Grik2
location: join(1867344..1867512,1872544..1872944,2092144..2092311,2095214..2095471,2134958..2135139,2140287..2140340,2143630..2143803,2234853..2234996,2238339..2238446,2260568..2260681,2299005..2299211,2338281..2338504,2364424..2364542,2368021..2368238,2458670..2458895,2476805..2477055,2486071..2486156,2490331..2492048)
location: region:1867344-2492048:1
so has part: feature:1867344-1867512:1:exon
so has part: feature:1872544-1872944:1:exon
so has part: feature:2092144-2092311:1:exon
so has part: feature:2095214-2095471:1:exon
so has part: feature:2134958-2135139:1:exon
so has part: feature:2140287-2140340:1:exon
so has part: feature:2143630-2143803:1:exon
so has part: feature:2234853-2234996:1:exon
so has part: feature:2238339-2238446:1:exon
so has part: feature:2260568-2260681:1:exon
so has part: feature:2299005-2299211:1:exon
so has part: feature:2338281-2338504:1:exon
so has part: feature:2364424-2364542:1:exon
so has part: feature:2368021-2368238:1:exon
so has part: feature:2458670-2458895:1:exon
so has part: feature:2476805-2477055:1:exon
so has part: feature:2486071-2486156:1:exon
so has part: feature:2490331-2492048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1867344-1867512:1:exon

position:1867512:1
position: 1867512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1872544-1872944:1:exon

position:1872544:1
position: 1872544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1872944:1
position: 1872944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2092144-2092311:1:exon

position:2092144:1
position: 2092144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2092311:1
position: 2092311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2095214-2095471:1:exon

position:2095214:1
position: 2095214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2095471:1
position: 2095471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2134958-2135139:1:exon

position:2134958:1
position: 2134958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2135139:1
position: 2135139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2140287-2140340:1:exon

position:2140287:1
position: 2140287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2140340:1
position: 2140340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2143630-2143803:1:exon

position:2143630:1
position: 2143630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2143803:1
position: 2143803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2234853-2234996:1:exon

position:2234853:1
position: 2234853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2234996:1
position: 2234996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2238339-2238446:1:exon

position:2238339:1
position: 2238339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2238446:1
position: 2238446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2260568-2260681:1:exon

position:2260568:1
position: 2260568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2260681:1
position: 2260681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2299005-2299211:1:exon

position:2299005:1
position: 2299005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2299211:1
position: 2299211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2338281-2338504:1:exon

position:2338281:1
position: 2338281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2338504:1
position: 2338504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2364424-2364542:1:exon

position:2364424:1
position: 2364424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2364542:1
position: 2364542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2368021-2368238:1:exon

position:2368021:1
position: 2368021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2368238:1
position: 2368238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2458670-2458895:1:exon

position:2458670:1
position: 2458670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2458895:1
position: 2458895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2476805-2477055:1:exon

position:2476805:1
position: 2476805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2477055:1
position: 2477055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2486071-2486156:1:exon

position:2486071:1
position: 2486071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2486156:1
position: 2486156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2490331-2492048:1:exon

position:2490331:1
position: 2490331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Grik2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Grik2
product: glutamate ionotropic receptor kainate type subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036168912.1
SIO_010081: Grik2
subclass of: SO_0000673
so part of: Grik2
location: join(1867345..1867512,1872544..1872944,2092144..2092311,2095214..2095471,2134958..2135139,2140287..2140340,2143630..2143803,2234853..2234996,2238339..2238446,2260568..2260681,2299005..2299211,2338281..2338504,2364424..2364542,2368021..2368238,2458670..2458895,2476805..2477055,2490331..2492048)
location: region:1867345-2492048:1
so has part: feature:1867345-1867512:1:exon
so has part: feature:1872544-1872944:1:exon
so has part: feature:2092144-2092311:1:exon
so has part: feature:2095214-2095471:1:exon
so has part: feature:2134958-2135139:1:exon
so has part: feature:2140287-2140340:1:exon
so has part: feature:2143630-2143803:1:exon
so has part: feature:2234853-2234996:1:exon
so has part: feature:2238339-2238446:1:exon
so has part: feature:2260568-2260681:1:exon
so has part: feature:2299005-2299211:1:exon
so has part: feature:2338281-2338504:1:exon
so has part: feature:2364424-2364542:1:exon
so has part: feature:2368021-2368238:1:exon
so has part: feature:2458670-2458895:1:exon
so has part: feature:2476805-2477055:1:exon
so has part: feature:2490331-2492048:1:exon

position:1867345:1
position: 1867345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1867345-1867512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1872544-1872944:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2092144-2092311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2095214-2095471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2134958-2135139:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2140287-2140340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2143630-2143803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2234853-2234996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2238339-2238446:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2260568-2260681:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2299005-2299211:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2338281-2338504:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2364424-2364542:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2368021-2368238:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2458670-2458895:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2476805-2477055:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2490331-2492048:1:exon

Grik2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Grik2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, kainate 2 isoform X1
translation: MKIISPFLSNLVISRSIKVLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDSAGLIRLQELIKAPSRYNLRLKIRQLPADTRDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTTILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKVTIAILQLQEEGKLHMMKEKWWRGNGCPEEESKEASALGVQNIGGIFIVLAAGLLLSVFVAVGEFLYKSKKNAQLEKRSFCSAMVEELRMSLKCQRRLKHKPQAPVIVKTEEVINMHTFNDRRLPGKETMA
SIO_010081: Grik2
subclass of: SO_0000673
so part of: Grik2
location: join(1872830..1872944,2092144..2092311,2095214..2095471,2134958..2135139,2140287..2140340,2143630..2143803,2234853..2234996,2238339..2238446,2260568..2260681,2299005..2299211,2338281..2338504,2364424..2364542,2368021..2368238,2458670..2458895,2476805..2477055,2490331..2490495)
location: region:1872830-2490495:1
so has part: feature:1872830-1872944:1:exon
so has part: feature:2092144-2092311:1:exon
so has part: feature:2095214-2095471:1:exon
so has part: feature:2134958-2135139:1:exon
so has part: feature:2140287-2140340:1:exon
so has part: feature:2143630-2143803:1:exon
so has part: feature:2234853-2234996:1:exon
so has part: feature:2238339-2238446:1:exon
so has part: feature:2260568-2260681:1:exon
so has part: feature:2299005-2299211:1:exon
so has part: feature:2338281-2338504:1:exon
so has part: feature:2364424-2364542:1:exon
so has part: feature:2368021-2368238:1:exon
so has part: feature:2458670-2458895:1:exon
so has part: feature:2476805-2477055:1:exon
so has part: feature:2490331-2490495:1:exon

XP_036024805.1
type: Protein
SIO_000068: ncbiprotein

position:1872830:1
position: 1872830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2490495:1
position: 2490495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1872830-1872944:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2092144-2092311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2095214-2095471:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2134958-2135139:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2140287-2140340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2143630-2143803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2234853-2234996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2238339-2238446:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2260568-2260681:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2299005-2299211:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2338281-2338504:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2364424-2364542:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2368021-2368238:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2458670-2458895:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2476805-2477055:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2490331-2490495:1:exon

Grik2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Grik2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, kainate 2 isoform X2
translation: MKIISPFLSNLVISRSIKVLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDSAGLIRLQELIKAPSRYNLRLKIRQLPADTRDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTTILEEPYVLFKKSDKPLYGNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKVTIAILQLQEEGKLHMMKEKWWRGNGCPEEESKEASALGVQNIGGIFIVLAAGLLLSVFVAVGEFLYKSKKNAQLEKESSIWLVPPYHPDTV
SIO_010081: Grik2
subclass of: SO_0000673
so part of: Grik2
location: join(1872830..1872944,2092144..2092311,2095214..2095471,2134958..2135139,2140287..2140340,2143630..2143803,2234853..2234996,2238339..2238446,2260568..2260681,2299005..2299211,2338281..2338504,2364424..2364542,2368021..2368238,2458670..2458895,2476805..2477055,2486071..2486118)
location: region:1872830-2486118:1
so has part: feature:1872830-1872944:1:exon
so has part: feature:2092144-2092311:1:exon
so has part: feature:2095214-2095471:1:exon
so has part: feature:2134958-2135139:1:exon
so has part: feature:2140287-2140340:1:exon
so has part: feature:2143630-2143803:1:exon
so has part: feature:2234853-2234996:1:exon
so has part: feature:2238339-2238446:1:exon
so has part: feature:2260568-2260681:1:exon
so has part: feature:2299005-2299211:1:exon
so has part: feature:2338281-2338504:1:exon
so has part: feature:2364424-2364542:1:exon
so has part: feature:2368021-2368238:1:exon
so has part: feature:2458670-2458895:1:exon
so has part: feature:2476805-2477055:1:exon
so has part: feature:2486071-2486118:1:exon

XP_036024806.1
type: Protein
SIO_000068: ncbiprotein

position:2486118:1
position: 2486118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1872830-1872944:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2092144-2092311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2095214-2095471:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2134958-2135139:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2140287-2140340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2143630-2143803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2234853-2234996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2238339-2238446:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2260568-2260681:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2299005-2299211:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2338281-2338504:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2364424-2364542:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2368021-2368238:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2458670-2458895:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2476805-2477055:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2486071-2486118:1:exon

LOC118570431
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570431
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2231063..2231378)
location: region:2231063-2231378:-1
so has part: feature:2231063-2231378:-1:exon

118570431
type: Gene
SIO_000068: ncbigene

position:2231063:-1
position: 2231063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2231378:-1
position: 2231378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2231063-2231378:-1:exon

LOC118570431
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570431
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118570431
subclass of: SO_0000673
so part of: LOC118570431
location: complement(2231063..2231378)
location: region:2231063-2231378:-1
so has part: feature:2231063-2231378:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2231063-2231378:-1:exon

LOC118570724
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570724
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3123114..3123277
location: region:3123114-3123277:1
so has part: feature:3123114-3123277:1:exon
subclass of: SO_0000623

118570724
type: Gene
SIO_000068: ncbigene

position:3123114:1
position: 3123114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3123277:1
position: 3123277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3123114-3123277:1:exon

LOC118570724
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: snRNA
gene: LOC118570724
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004943222.1
SIO_010081: LOC118570724
subclass of: SO_0000673
so part of: LOC118570724
location: 3123114..3123277
location: region:3123114-3123277:1
so has part: feature:3123114-3123277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3123114-3123277:1:exon

LOC118570715
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3854673..3855276
location: region:3854673-3855276:1
so has part: feature:3854673-3855276:1:exon
subclass of: SO_0000010

118570715
type: Gene
SIO_000068: ncbigene

position:3854673:1
position: 3854673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3855276:1
position: 3855276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3854673-3855276:1:exon

LOC118570715
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118570715
product: FGFR1 oncogene partner 2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036169377.1
SIO_010081: LOC118570715
subclass of: SO_0000673
so part of: LOC118570715
location: 3854673..3855276
location: region:3854673-3855276:1
so has part: feature:3854673-3855276:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3854673-3855276:1:exon

LOC118570715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118570715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FGFR1 oncogene partner 2 homolog
translation: MSCTTEKALADAKVLVERLRDHDDAAESLIEQTMALSKRVEAVKQYQEEIQELNEVARHWPRSTLVMGIQQENRQIRKLQQENKELQTSLEEHQSVLELIMSKCREQMFQLLMASKRDDQGIIIKFKEQHSKELQAHVDPIPEMAAVMRKAIEIDEQQGCKEQERIFQLEQENKGLLEILQIT
SIO_010081: LOC118570715
subclass of: SO_0000673
so part of: LOC118570715
location: 3854673..3855224
location: region:3854673-3855224:1
so has part: feature:3854673-3855224:1:exon

XP_036025270.1
type: Protein
SIO_000068: ncbiprotein

position:3855224:1
position: 3855224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3854673-3855224:1:exon

LOC118570212
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4009731..4010645
location: region:4009731-4010645:1
so has part: feature:4009731-4010645:1:exon

118570212
type: Gene
SIO_000068: ncbigene

position:4009731:1
position: 4009731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4010645:1
position: 4010645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4009731-4010645:1:exon

LOC118570212
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570212
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118570212
subclass of: SO_0000673
so part of: LOC118570212
location: 4009731..4010645
location: region:4009731-4010645:1
so has part: feature:4009731-4010645:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4009731-4010645:1:exon

LOC118570654
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4319328..4320313
location: region:4319328-4320313:1
so has part: feature:4319328-4320313:1:exon
subclass of: SO_0000010

118570654
type: Gene
SIO_000068: ncbigene

position:4319328:1
position: 4319328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4320313:1
position: 4320313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4319328-4320313:1:exon

LOC118570654
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118570654
product: endogenous retrovirus group K member 7 Pro protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_036169316.1
SIO_010081: LOC118570654
subclass of: SO_0000673
so part of: LOC118570654
location: join(4319328..4319351,4319804..4320313)
location: region:4319328-4320313:1
so has part: feature:4319328-4319351:1:exon
so has part: feature:4319804-4320313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4319328-4319351:1:exon

position:4319351:1
position: 4319351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4319804-4320313:1:exon

position:4319804:1
position: 4319804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118570654
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118570654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endogenous retrovirus group K member 7 Pro protein-like
translation: MAFIGRGNSAQPRGAAQIGSPEAYWVQPISHSRPTLTLKLDGKKFQGILDTGADTTVISQDHWPASWSLASLTDLKGIGQSSNILQFSKVLAWTDEEGNQGTVTPFVVPGLPVNLWGQDIFSQMKVILYSPNEVVTQQMLRLCFIPGKGFSKLQQGRTQPIAPTIKTDRLGLGFEGF
SIO_010081: LOC118570654
subclass of: SO_0000673
so part of: LOC118570654
location: join(4319328..4319351,4319804..4320313)
location: region:4319328-4320313:1
so has part: feature:4319328-4319351:1:exon
so has part: feature:4319804-4320313:1:exon

XP_036025209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4319328-4319351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4319804-4320313:1:exon

LOC118570655
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4412488..4414683
location: region:4412488-4414683:1
so has part: feature:4412488-4414683:1:exon

118570655
type: Gene
SIO_000068: ncbigene

position:4412488:1
position: 4412488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4414683:1
position: 4414683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4412488-4414683:1:exon

LOC118570655
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570655
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
pseudo: true
SIO_010081: LOC118570655
subclass of: SO_0000673
so part of: LOC118570655
location: 4412488..4412711
location: region:4412488-4412711:1
so has part: feature:4412488-4412711:1:exon

position:4412711:1
position: 4412711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4412488-4412711:1:exon

LOC118570655
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570655
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
pseudo: true
SIO_010081: LOC118570655
subclass of: SO_0000673
so part of: LOC118570655
location: 4414294..4414683
location: region:4414294-4414683:1
so has part: feature:4414294-4414683:1:exon

position:4414294:1
position: 4414294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4414294-4414683:1:exon

LOC118570730
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570730
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4517289..4517449
location: region:4517289-4517449:1
so has part: feature:4517289-4517449:1:exon
subclass of: SO_0000623

118570730
type: Gene
SIO_000068: ncbigene

position:4517289:1
position: 4517289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4517449:1
position: 4517449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4517289-4517449:1:exon

LOC118570730
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: snRNA
gene: LOC118570730
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004943226.1
SIO_010081: LOC118570730
subclass of: SO_0000673
so part of: LOC118570730
location: 4517289..4517449
location: region:4517289-4517449:1
so has part: feature:4517289-4517449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4517289-4517449:1:exon

LOC118570563
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5013576..5014991)
location: region:5013576-5014991:-1
so has part: feature:5013576-5014991:-1:exon

118570563
type: Gene
SIO_000068: ncbigene

position:5013576:-1
position: 5013576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5014991:-1
position: 5014991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5013576-5014991:-1:exon

LOC118570563
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570563
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
pseudo: true
SIO_010081: LOC118570563
subclass of: SO_0000673
so part of: LOC118570563
location: complement(5013576..5013995)
location: region:5013576-5013995:-1
so has part: feature:5013576-5013995:-1:exon

position:5013995:-1
position: 5013995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5013576-5013995:-1:exon

LOC118570563
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570563
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
pseudo: true
SIO_010081: LOC118570563
subclass of: SO_0000673
so part of: LOC118570563
location: complement(5014533..5014991)
location: region:5014533-5014991:-1
so has part: feature:5014533-5014991:-1:exon

position:5014533:-1
position: 5014533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5014533-5014991:-1:exon

Trnaa-agc
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Trnaa-agc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5443651..5443717
location: region:5443651-5443717:1
so has part: feature:5443651-5443717:1:exon
subclass of: SO_0000663

118570773
type: Gene
SIO_000068: ncbigene

position:5443651:1
position: 5443651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5443717:1
position: 5443717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5443651-5443717:1:exon

Trnaa-agc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 38674
gene: Trnaa-agc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA alanine (anticodon AGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5443678..5443680,aa:Ala,seq:agc)
SIO_010081: Trnaa-agc
subclass of: SO_0000673
so part of: Trnaa-agc
location: 5443651..5443717
location: region:5443651-5443717:1
so has part: feature:5443651-5443717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5443651-5443717:1:exon

LOC118570656
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5499585..5501292)
location: region:5499585-5501292:-1
so has part: feature:5499585-5501292:-1:exon

118570656
type: Gene
SIO_000068: ncbigene

position:5499585:-1
position: 5499585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5501292:-1
position: 5501292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5499585-5501292:-1:exon

LOC118570656
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570656
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC118570656
subclass of: SO_0000673
so part of: LOC118570656
location: complement(5499585..5500895)
location: region:5499585-5500895:-1
so has part: feature:5499585-5500895:-1:exon

position:5500895:-1
position: 5500895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5499585-5500895:-1:exon

LOC118570656
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570656
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC118570656
subclass of: SO_0000673
so part of: LOC118570656
location: complement(5501248..5501292)
location: region:5501248-5501292:-1
so has part: feature:5501248-5501292:-1:exon

position:5501248:-1
position: 5501248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5501248-5501292:-1:exon

Hace1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Hace1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5559621..5670651)
location: region:5559621-5670651:-1
so has part: feature:5559621-5670651:-1:exon
subclass of: SO_0000010

118570249
type: Gene
SIO_000068: ncbigene

position:5559621:-1
position: 5559621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5670651:-1
position: 5670651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5559621-5670651:-1:exon

Hace1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Hace1
product: HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036168628.1
SIO_010081: Hace1
subclass of: SO_0000673
so part of: Hace1
location: complement(join(5559621..5560452,5561816..5561929,5571877..5571947,5572223..5572321,5577742..5577873,5589276..5589472,5589991..5590140,5593906..5593993,5594136..5594233,5594330..5594441,5600302..5600389,5600600..5600668,5601097..5601431,5613234..5613384,5616142..5616248,5617349..5617450,5617586..5617682,5626765..5626847,5638585..5638716,5646306..5646381,5658895..5658999,5659638..5659727,5659932..5659986,5670302..5670651))
location: region:5559621-5670651:-1
so has part: feature:5670302-5670651:-1:exon
so has part: feature:5659932-5659986:-1:exon
so has part: feature:5659638-5659727:-1:exon
so has part: feature:5658895-5658999:-1:exon
so has part: feature:5646306-5646381:-1:exon
so has part: feature:5638585-5638716:-1:exon
so has part: feature:5626765-5626847:-1:exon
so has part: feature:5617586-5617682:-1:exon
so has part: feature:5617349-5617450:-1:exon
so has part: feature:5616142-5616248:-1:exon
so has part: feature:5613234-5613384:-1:exon
so has part: feature:5601097-5601431:-1:exon
so has part: feature:5600600-5600668:-1:exon
so has part: feature:5600302-5600389:-1:exon
so has part: feature:5594330-5594441:-1:exon
so has part: feature:5594136-5594233:-1:exon
so has part: feature:5593906-5593993:-1:exon
so has part: feature:5589991-5590140:-1:exon
so has part: feature:5589276-5589472:-1:exon
so has part: feature:5577742-5577873:-1:exon
so has part: feature:5572223-5572321:-1:exon
so has part: feature:5571877-5571947:-1:exon
so has part: feature:5561816-5561929:-1:exon
so has part: feature:5559621-5560452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5670302-5670651:-1:exon

position:5670302:-1
position: 5670302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5659932-5659986:-1:exon

position:5659932:-1
position: 5659932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5659986:-1
position: 5659986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5659638-5659727:-1:exon

position:5659638:-1
position: 5659638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5659727:-1
position: 5659727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5658895-5658999:-1:exon

position:5658895:-1
position: 5658895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5658999:-1
position: 5658999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5646306-5646381:-1:exon

position:5646306:-1
position: 5646306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5646381:-1
position: 5646381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5638585-5638716:-1:exon

position:5638585:-1
position: 5638585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5638716:-1
position: 5638716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5626765-5626847:-1:exon

position:5626765:-1
position: 5626765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5626847:-1
position: 5626847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5617586-5617682:-1:exon

position:5617586:-1
position: 5617586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5617682:-1
position: 5617682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5617349-5617450:-1:exon

position:5617349:-1
position: 5617349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5617450:-1
position: 5617450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5616142-5616248:-1:exon

position:5616142:-1
position: 5616142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5616248:-1
position: 5616248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5613234-5613384:-1:exon

position:5613234:-1
position: 5613234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5613384:-1
position: 5613384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5601097-5601431:-1:exon

position:5601097:-1
position: 5601097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5601431:-1
position: 5601431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5600600-5600668:-1:exon

position:5600600:-1
position: 5600600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5600668:-1
position: 5600668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5600302-5600389:-1:exon

position:5600302:-1
position: 5600302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5600389:-1
position: 5600389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5594330-5594441:-1:exon

position:5594330:-1
position: 5594330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5594441:-1
position: 5594441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5594136-5594233:-1:exon

position:5594136:-1
position: 5594136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5594233:-1
position: 5594233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5593906-5593993:-1:exon

position:5593906:-1
position: 5593906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5593993:-1
position: 5593993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5589991-5590140:-1:exon

position:5589991:-1
position: 5589991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5590140:-1
position: 5590140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5589276-5589472:-1:exon

position:5589276:-1
position: 5589276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5589472:-1
position: 5589472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5577742-5577873:-1:exon

position:5577742:-1
position: 5577742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5577873:-1
position: 5577873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5572223-5572321:-1:exon

position:5572223:-1
position: 5572223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5572321:-1
position: 5572321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5571877-5571947:-1:exon

position:5571877:-1
position: 5571877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5571947:-1
position: 5571947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5561816-5561929:-1:exon

position:5561816:-1
position: 5561816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5561929:-1
position: 5561929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5559621-5560452:-1:exon

position:5560452:-1
position: 5560452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hace1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Hace1
product: HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_036168629.1
SIO_010081: Hace1
subclass of: SO_0000673
so part of: Hace1
location: complement(join(5559621..5560452,5561816..5561929,5571877..5571947,5572223..5572321,5577742..5577873,5589276..5589472,5589991..5590140,5593906..5593993,5594136..5594233,5594330..5594441,5600302..5600389,5600600..5600668,5601097..5601431,5613234..5613384,5616142..5616248,5617349..5617450,5617586..5617682,5626765..5626847,5646306..5646381,5658895..5658999,5659638..5659727,5659932..5659986,5670302..5670625))
location: region:5559621-5670625:-1
so has part: feature:5670302-5670625:-1:exon
so has part: feature:5659932-5659986:-1:exon
so has part: feature:5659638-5659727:-1:exon
so has part: feature:5658895-5658999:-1:exon
so has part: feature:5646306-5646381:-1:exon
so has part: feature:5626765-5626847:-1:exon
so has part: feature:5617586-5617682:-1:exon
so has part: feature:5617349-5617450:-1:exon
so has part: feature:5616142-5616248:-1:exon
so has part: feature:5613234-5613384:-1:exon
so has part: feature:5601097-5601431:-1:exon
so has part: feature:5600600-5600668:-1:exon
so has part: feature:5600302-5600389:-1:exon
so has part: feature:5594330-5594441:-1:exon
so has part: feature:5594136-5594233:-1:exon
so has part: feature:5593906-5593993:-1:exon
so has part: feature:5589991-5590140:-1:exon
so has part: feature:5589276-5589472:-1:exon
so has part: feature:5577742-5577873:-1:exon
so has part: feature:5572223-5572321:-1:exon
so has part: feature:5571877-5571947:-1:exon
so has part: feature:5561816-5561929:-1:exon
so has part: feature:5559621-5560452:-1:exon

position:5670625:-1
position: 5670625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5670302-5670625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5659932-5659986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5659638-5659727:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5658895-5658999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5646306-5646381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5626765-5626847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5617586-5617682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5617349-5617450:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5616142-5616248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5613234-5613384:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5601097-5601431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5600600-5600668:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5600302-5600389:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5594330-5594441:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5594136-5594233:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5593906-5593993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5589991-5590140:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5589276-5589472:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5577742-5577873:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5572223-5572321:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5571877-5571947:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5561816-5561929:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5559621-5560452:-1:exon

Hace1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Hace1
product: HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_036168630.1
SIO_010081: Hace1
subclass of: SO_0000673
so part of: Hace1
location: complement(join(5559621..5560452,5561816..5561929,5571877..5571947,5572223..5572321,5577742..5577873,5589276..5589472,5589991..5590140,5593906..5593993,5594136..5594233,5594330..5594441,5600302..5600389,5600600..5600668,5601097..5601431,5613234..5613384,5616142..5616248,5617349..5617450,5617586..5617682,5638585..5638716,5646306..5646381,5658895..5658999,5659638..5659727,5659932..5659986,5670302..5670625))
location: region:5559621-5670625:-1
so has part: feature:5670302-5670625:-1:exon
so has part: feature:5659932-5659986:-1:exon
so has part: feature:5659638-5659727:-1:exon
so has part: feature:5658895-5658999:-1:exon
so has part: feature:5646306-5646381:-1:exon
so has part: feature:5638585-5638716:-1:exon
so has part: feature:5617586-5617682:-1:exon
so has part: feature:5617349-5617450:-1:exon
so has part: feature:5616142-5616248:-1:exon
so has part: feature:5613234-5613384:-1:exon
so has part: feature:5601097-5601431:-1:exon
so has part: feature:5600600-5600668:-1:exon
so has part: feature:5600302-5600389:-1:exon
so has part: feature:5594330-5594441:-1:exon
so has part: feature:5594136-5594233:-1:exon
so has part: feature:5593906-5593993:-1:exon
so has part: feature:5589991-5590140:-1:exon
so has part: feature:5589276-5589472:-1:exon
so has part: feature:5577742-5577873:-1:exon
so has part: feature:5572223-5572321:-1:exon
so has part: feature:5571877-5571947:-1:exon
so has part: feature:5561816-5561929:-1:exon
so has part: feature:5559621-5560452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5670302-5670625:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5659932-5659986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5659638-5659727:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5658895-5658999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5646306-5646381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5638585-5638716:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5617586-5617682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5617349-5617450:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5616142-5616248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5613234-5613384:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5601097-5601431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5600600-5600668:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5600302-5600389:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5594330-5594441:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5594136-5594233:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5593906-5593993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5589991-5590140:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5589276-5589472:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5577742-5577873:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5572223-5572321:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5571877-5571947:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5561816-5561929:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5559621-5560452:-1:exon

Hace1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Hace1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase HACE1 isoform X2
translation: MERAMEQLNRLTRSLRRARTVELPEDNETAVYTLMPMVMADQHRSVSELLSNSKFDVNYAFGRVKRSLLHIAANCGSVECLVLLLKKGANPNYQDISGCTPLHLAARNGQKKCMSKLLEYSADVNICNNEGLTATVQCLLDSGADINRPNVSGATPLYFACSHGQRDTAQILLLRGAKYLPDKNGVTPLDLCVQGGYGETCEVLIQYHPRLFQTVVQMTQNEDLRENMLRQVLEHLSQQSESQYLKILTSLAEVATTNGHKLLSLSSNYDAQMKSLLRIVRIFCHVFRIGPSSPSNGIDMGYNGNKTPRSQVFKPLELLWHSLDEWLVLIATELMKNKKDSTDITSILLKQKGQDPGATSISAFEPSGPGSCGNLSTGAGESKPDALAGHQEANADGQDVVAMTANRLSAVIQAFYMCCSCQMPPGMTSPRFIEFVCKHDEVLKCFVNRNPKIIFDHFHFLLECPELMSRFMHIIKAQPFKDRCEWFYEHLHSGQPDSDMVHRPVNENDILLVHRDSIFRSSCEIVSKANCAKLKQGIAVRFHGEEGMGQGVVREWFDILSNEIVNPDYALFTQSADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALTHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLGLELTFSVETDVFGAMEEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGYTMA
SIO_010081: Hace1
subclass of: SO_0000673
so part of: Hace1
location: complement(join(5560350..5560452,5561816..5561929,5571877..5571947,5572223..5572321,5577742..5577873,5589276..5589472,5589991..5590140,5593906..5593993,5594136..5594233,5594330..5594441,5600302..5600389,5600600..5600668,5601097..5601431,5613234..5613384,5616142..5616248,5617349..5617450,5617586..5617682,5626765..5626847,5646306..5646381,5658895..5658999,5659638..5659727,5659932..5659986,5670302..5670377))
location: region:5560350-5670377:-1
so has part: feature:5670302-5670377:-1:exon
so has part: feature:5659932-5659986:-1:exon
so has part: feature:5659638-5659727:-1:exon
so has part: feature:5658895-5658999:-1:exon
so has part: feature:5646306-5646381:-1:exon
so has part: feature:5626765-5626847:-1:exon
so has part: feature:5617586-5617682:-1:exon
so has part: feature:5617349-5617450:-1:exon
so has part: feature:5616142-5616248:-1:exon
so has part: feature:5613234-5613384:-1:exon
so has part: feature:5601097-5601431:-1:exon
so has part: feature:5600600-5600668:-1:exon
so has part: feature:5600302-5600389:-1:exon
so has part: feature:5594330-5594441:-1:exon
so has part: feature:5594136-5594233:-1:exon
so has part: feature:5593906-5593993:-1:exon
so has part: feature:5589991-5590140:-1:exon
so has part: feature:5589276-5589472:-1:exon
so has part: feature:5577742-5577873:-1:exon
so has part: feature:5572223-5572321:-1:exon
so has part: feature:5571877-5571947:-1:exon
so has part: feature:5561816-5561929:-1:exon
so has part: feature:5560350-5560452:-1:exon

XP_036024522.1
type: Protein
SIO_000068: ncbiprotein

position:5560350:-1
position: 5560350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5670377:-1
position: 5670377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5670302-5670377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5659932-5659986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5659638-5659727:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5658895-5658999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5646306-5646381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5626765-5626847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5617586-5617682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5617349-5617450:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5616142-5616248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5613234-5613384:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5601097-5601431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5600600-5600668:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5600302-5600389:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5594330-5594441:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5594136-5594233:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5593906-5593993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5589991-5590140:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5589276-5589472:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5577742-5577873:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5572223-5572321:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5571877-5571947:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5561816-5561929:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5560350-5560452:-1:exon

Hace1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Hace1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase HACE1 isoform X1
translation: MERAMEQLNRLTRSLRRARTVELPEDNETAVYTLMPMVMADQHRSVSELLSNSKFDVNYAFGRVKRSLLHIAANCGSVECLVLLLKKGANPNYQDISGCTPLHLAARNGQKKCMSKLLEYSADVNICNNEGLTAIHWLAVNGRTELLHDLVQHVSDVDVEDAMGQTALHVACQNGHKTTVQCLLDSGADINRPNVSGATPLYFACSHGQRDTAQILLLRGAKYLPDKNGVTPLDLCVQGGYGETCEVLIQYHPRLFQTVVQMTQNEDLRENMLRQVLEHLSQQSESQYLKILTSLAEVATTNGHKLLSLSSNYDAQMKSLLRIVRIFCHVFRIGPSSPSNGIDMGYNGNKTPRSQVFKPLELLWHSLDEWLVLIATELMKNKKDSTDITSILLKQKGQDPGATSISAFEPSGPGSCGNLSTGAGESKPDALAGHQEANADGQDVVAMTANRLSAVIQAFYMCCSCQMPPGMTSPRFIEFVCKHDEVLKCFVNRNPKIIFDHFHFLLECPELMSRFMHIIKAQPFKDRCEWFYEHLHSGQPDSDMVHRPVNENDILLVHRDSIFRSSCEIVSKANCAKLKQGIAVRFHGEEGMGQGVVREWFDILSNEIVNPDYALFTQSADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALTHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLGLELTFSVETDVFGAMEEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGYTMA
SIO_010081: Hace1
subclass of: SO_0000673
so part of: Hace1
location: complement(join(5560350..5560452,5561816..5561929,5571877..5571947,5572223..5572321,5577742..5577873,5589276..5589472,5589991..5590140,5593906..5593993,5594136..5594233,5594330..5594441,5600302..5600389,5600600..5600668,5601097..5601431,5613234..5613384,5616142..5616248,5617349..5617450,5617586..5617682,5626765..5626847,5638585..5638716,5646306..5646381,5658895..5658999,5659638..5659727,5659932..5659986,5670302..5670377))
location: region:5560350-5670377:-1
so has part: feature:5670302-5670377:-1:exon
so has part: feature:5659932-5659986:-1:exon
so has part: feature:5659638-5659727:-1:exon
so has part: feature:5658895-5658999:-1:exon
so has part: feature:5646306-5646381:-1:exon
so has part: feature:5638585-5638716:-1:exon
so has part: feature:5626765-5626847:-1:exon
so has part: feature:5617586-5617682:-1:exon
so has part: feature:5617349-5617450:-1:exon
so has part: feature:5616142-5616248:-1:exon
so has part: feature:5613234-5613384:-1:exon
so has part: feature:5601097-5601431:-1:exon
so has part: feature:5600600-5600668:-1:exon
so has part: feature:5600302-5600389:-1:exon
so has part: feature:5594330-5594441:-1:exon
so has part: feature:5594136-5594233:-1:exon
so has part: feature:5593906-5593993:-1:exon
so has part: feature:5589991-5590140:-1:exon
so has part: feature:5589276-5589472:-1:exon
so has part: feature:5577742-5577873:-1:exon
so has part: feature:5572223-5572321:-1:exon
so has part: feature:5571877-5571947:-1:exon
so has part: feature:5561816-5561929:-1:exon
so has part: feature:5560350-5560452:-1:exon

XP_036024521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5670302-5670377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5659932-5659986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5659638-5659727:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5658895-5658999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5646306-5646381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5638585-5638716:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5626765-5626847:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5617586-5617682:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5617349-5617450:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5616142-5616248:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5613234-5613384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5601097-5601431:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5600600-5600668:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5600302-5600389:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5594330-5594441:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5594136-5594233:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5593906-5593993:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5589991-5590140:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5589276-5589472:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5577742-5577873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5572223-5572321:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5571877-5571947:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5561816-5561929:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5560350-5560452:-1:exon

Hace1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Hace1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase HACE1 isoform X3
translation: MGTKRHGQRDTAQILLLRGAKYLPDKNGVTPLDLCVQGGYGETCEVLIQYHPRLFQTVVQMTQNEDLRENMLRQVLEHLSQQSESQYLKILTSLAEVATTNGHKLLSLSSNYDAQMKSLLRIVRIFCHVFRIGPSSPSNGIDMGYNGNKTPRSQVFKPLELLWHSLDEWLVLIATELMKNKKDSTDITSILLKQKGQDPGATSISAFEPSGPGSCGNLSTGAGESKPDALAGHQEANADGQDVVAMTANRLSAVIQAFYMCCSCQMPPGMTSPRFIEFVCKHDEVLKCFVNRNPKIIFDHFHFLLECPELMSRFMHIIKAQPFKDRCEWFYEHLHSGQPDSDMVHRPVNENDILLVHRDSIFRSSCEIVSKANCAKLKQGIAVRFHGEEGMGQGVVREWFDILSNEIVNPDYALFTQSADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALTHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLGLELTFSVETDVFGAMEEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGYTMA
SIO_010081: Hace1
subclass of: SO_0000673
so part of: Hace1
location: complement(join(5560350..5560452,5561816..5561929,5571877..5571947,5572223..5572321,5577742..5577873,5589276..5589472,5589991..5590140,5593906..5593993,5594136..5594233,5594330..5594441,5600302..5600389,5600600..5600668,5601097..5601431,5613234..5613384,5616142..5616248,5617349..5617450,5617586..5617682,5638585..5638598))
location: region:5560350-5638598:-1
so has part: feature:5638585-5638598:-1:exon
so has part: feature:5617586-5617682:-1:exon
so has part: feature:5617349-5617450:-1:exon
so has part: feature:5616142-5616248:-1:exon
so has part: feature:5613234-5613384:-1:exon
so has part: feature:5601097-5601431:-1:exon
so has part: feature:5600600-5600668:-1:exon
so has part: feature:5600302-5600389:-1:exon
so has part: feature:5594330-5594441:-1:exon
so has part: feature:5594136-5594233:-1:exon
so has part: feature:5593906-5593993:-1:exon
so has part: feature:5589991-5590140:-1:exon
so has part: feature:5589276-5589472:-1:exon
so has part: feature:5577742-5577873:-1:exon
so has part: feature:5572223-5572321:-1:exon
so has part: feature:5571877-5571947:-1:exon
so has part: feature:5561816-5561929:-1:exon
so has part: feature:5560350-5560452:-1:exon

XP_036024523.1
type: Protein
SIO_000068: ncbiprotein

position:5638598:-1
position: 5638598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5638585-5638598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5617586-5617682:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5617349-5617450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5616142-5616248:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5613234-5613384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5601097-5601431:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5600600-5600668:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5600302-5600389:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5594330-5594441:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5594136-5594233:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5593906-5593993:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5589991-5590140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5589276-5589472:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5577742-5577873:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5572223-5572321:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5571877-5571947:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5561816-5561929:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5560350-5560452:-1:exon

LOC118570396
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5583340..5585276)
location: region:5583340-5585276:-1
so has part: feature:5583340-5585276:-1:exon

118570396
type: Gene
SIO_000068: ncbigene

position:5583340:-1
position: 5583340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5585276:-1
position: 5585276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5583340-5585276:-1:exon

LOC118570396
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570396
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC118570396
subclass of: SO_0000673
so part of: LOC118570396
location: complement(5583340..5583712)
location: region:5583340-5583712:-1
so has part: feature:5583340-5583712:-1:exon

position:5583712:-1
position: 5583712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5583340-5583712:-1:exon

LOC118570396
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570396
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC118570396
subclass of: SO_0000673
so part of: LOC118570396
location: complement(5584740..5585118)
location: region:5584740-5585118:-1
so has part: feature:5584740-5585118:-1:exon

position:5584740:-1
position: 5584740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5585118:-1
position: 5585118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5584740-5585118:-1:exon

LOC118570396
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570396
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC118570396
subclass of: SO_0000673
so part of: LOC118570396
location: complement(5585224..5585276)
location: region:5585224-5585276:-1
so has part: feature:5585224-5585276:-1:exon

position:5585224:-1
position: 5585224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5585224-5585276:-1:exon

LOC118570253
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5712215..5712869
location: region:5712215-5712869:1
so has part: feature:5712215-5712869:1:exon
subclass of: SO_0000010

118570253
type: Gene
SIO_000068: ncbigene

position:5712215:1
position: 5712215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5712869:1
position: 5712869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5712215-5712869:1:exon

LOC118570253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118570253
product: diazepam-binding inhibitor-like 5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_036168637.1
SIO_010081: LOC118570253
subclass of: SO_0000673
so part of: LOC118570253
location: join(5712215..5712302,5712695..5712869)
location: region:5712215-5712869:1
so has part: feature:5712215-5712302:1:exon
so has part: feature:5712695-5712869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5712215-5712302:1:exon

position:5712302:1
position: 5712302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5712695-5712869:1:exon

position:5712695:1
position: 5712695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118570253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118570253
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:5712772..5712774,aa:OTHER)
transl except: (pos:5712781..5712783,aa:OTHER)
product: LOW QUALITY PROTEIN: diazepam-binding inhibitor-like 5
translation: MSHVEFEMALTSLKQLKGPVSKKRKLLMYNFYKQTTQGDYNIPVPPATDKGTKAKXEAXNVNKXMLKMDMMRICVANMEDLKKAEAG
SIO_010081: LOC118570253
subclass of: SO_0000673
so part of: LOC118570253
location: join(5712215..5712302,5712695..5712869)
location: region:5712215-5712869:1
so has part: feature:5712215-5712302:1:exon
so has part: feature:5712695-5712869:1:exon

XP_036024530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5712215-5712302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5712695-5712869:1:exon

Lin28b
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Lin28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5759068..5861630
location: region:5759068-5861630:1
so has part: feature:5759068-5861630:1:exon
subclass of: SO_0000010

118570586
type: Gene
SIO_000068: ncbigene

position:5759068:1
position: 5759068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5861630:1
position: 5861630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5759068-5861630:1:exon

Lin28b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Lin28b
product: lin-28 homolog B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036169227.1
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(5759068..5759139,5770206..5770254,5777274..5777455,5829888..5830072,5831893..5831964,5856619..5861630)
location: region:5759068-5861630:1
so has part: feature:5759068-5759139:1:exon
so has part: feature:5770206-5770254:1:exon
so has part: feature:5777274-5777455:1:exon
so has part: feature:5829888-5830072:1:exon
so has part: feature:5831893-5831964:1:exon
so has part: feature:5856619-5861630:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5759068-5759139:1:exon

position:5759139:1
position: 5759139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5770206-5770254:1:exon

position:5770206:1
position: 5770206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5770254:1
position: 5770254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5777274-5777455:1:exon

position:5777274:1
position: 5777274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5777455:1
position: 5777455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5829888-5830072:1:exon

position:5829888:1
position: 5829888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5830072:1
position: 5830072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5831893-5831964:1:exon

position:5831893:1
position: 5831893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5831964:1
position: 5831964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5856619-5861630:1:exon

position:5856619:1
position: 5856619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Lin28b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Lin28b
product: lin-28 homolog B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036169226.1
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(5759546..5759899,5770139..5770254,5777274..5777455,5829888..5830072,5831893..5831964,5856619..5861630)
location: region:5759546-5861630:1
so has part: feature:5759546-5759899:1:exon
so has part: feature:5770139-5770254:1:exon
so has part: feature:5777274-5777455:1:exon
so has part: feature:5829888-5830072:1:exon
so has part: feature:5831893-5831964:1:exon
so has part: feature:5856619-5861630:1:exon

position:5759546:1
position: 5759546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5759546-5759899:1:exon

position:5759899:1
position: 5759899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5770139-5770254:1:exon

position:5770139:1
position: 5770139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5777274-5777455:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5829888-5830072:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5831893-5831964:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5856619-5861630:1:exon

Lin28b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Lin28b
product: lin-28 homolog B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036169225.1
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(5769942..5770254,5777274..5777455,5829888..5830072,5831893..5831964,5856619..5861630)
location: region:5769942-5861630:1
so has part: feature:5769942-5770254:1:exon
so has part: feature:5777274-5777455:1:exon
so has part: feature:5829888-5830072:1:exon
so has part: feature:5831893-5831964:1:exon
so has part: feature:5856619-5861630:1:exon

position:5769942:1
position: 5769942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5769942-5770254:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5777274-5777455:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5829888-5830072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5831893-5831964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5856619-5861630:1:exon

Lin28b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Lin28b
product: lin-28 homolog B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036169229.1
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(5769942..5770254,5777274..5777455,5829888..5830072,5856619..5861630)
location: region:5769942-5861630:1
so has part: feature:5769942-5770254:1:exon
so has part: feature:5777274-5777455:1:exon
so has part: feature:5829888-5830072:1:exon
so has part: feature:5856619-5861630:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5769942-5770254:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5777274-5777455:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5829888-5830072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5856619-5861630:1:exon

Lin28b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Lin28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-28 homolog B isoform X1
translation: MRSFNRVSAAPGGASKGEEPEKLPELAEEESQVLHGKGHCKWFNVRMGFGFISMINREGNPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSPKGLESVRVTGPGGSPCLGSERRPKGKALQKRKPKGDRWRRQDLLMDQMWTVREEESRMIPRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHRVVTQLPPGSQGRQEAECQPCTSTSPREGGGGRGCTSPFPQEARSETAELPDRSPQEVSSVKAFVAAEEQNKKGPSIQKRKKP
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(5770221..5770254,5777274..5777455,5829888..5830072,5831893..5831964,5856619..5856985)
location: region:5770221-5856985:1
so has part: feature:5770221-5770254:1:exon
so has part: feature:5777274-5777455:1:exon
so has part: feature:5829888-5830072:1:exon
so has part: feature:5831893-5831964:1:exon
so has part: feature:5856619-5856985:1:exon

XP_036025118.1
type: Protein
SIO_000068: ncbiprotein

position:5770221:1
position: 5770221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5856985:1
position: 5856985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5770221-5770254:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5777274-5777455:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5829888-5830072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5831893-5831964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5856619-5856985:1:exon

Lin28b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Lin28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-28 homolog B isoform X1
translation: MRSFNRVSAAPGGASKGEEPEKLPELAEEESQVLHGKGHCKWFNVRMGFGFISMINREGNPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSPKGLESVRVTGPGGSPCLGSERRPKGKALQKRKPKGDRWRRQDLLMDQMWTVREEESRMIPRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHRVVTQLPPGSQGRQEAECQPCTSTSPREGGGGRGCTSPFPQEARSETAELPDRSPQEVSSVKAFVAAEEQNKKGPSIQKRKKP
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(5770221..5770254,5777274..5777455,5829888..5830072,5831893..5831964,5856619..5856985)
location: region:5770221-5856985:1
so has part: feature:5770221-5770254:1:exon
so has part: feature:5777274-5777455:1:exon
so has part: feature:5829888-5830072:1:exon
so has part: feature:5831893-5831964:1:exon
so has part: feature:5856619-5856985:1:exon

XP_036025119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5770221-5770254:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5777274-5777455:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5829888-5830072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5831893-5831964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5856619-5856985:1:exon

Lin28b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Lin28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-28 homolog B isoform X1
translation: MRSFNRVSAAPGGASKGEEPEKLPELAEEESQVLHGKGHCKWFNVRMGFGFISMINREGNPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSPKGLESVRVTGPGGSPCLGSERRPKGKALQKRKPKGDRWRRQDLLMDQMWTVREEESRMIPRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHRVVTQLPPGSQGRQEAECQPCTSTSPREGGGGRGCTSPFPQEARSETAELPDRSPQEVSSVKAFVAAEEQNKKGPSIQKRKKP
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(5770221..5770254,5777274..5777455,5829888..5830072,5831893..5831964,5856619..5856985)
location: region:5770221-5856985:1
so has part: feature:5770221-5770254:1:exon
so has part: feature:5777274-5777455:1:exon
so has part: feature:5829888-5830072:1:exon
so has part: feature:5831893-5831964:1:exon
so has part: feature:5856619-5856985:1:exon

XP_036025120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5770221-5770254:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5777274-5777455:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5829888-5830072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5831893-5831964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5856619-5856985:1:exon

Lin28b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Lin28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-28 homolog B isoform X3
translation: MRSFNRVSAAPGGASKGEEPEKLPELAEEESQVLHGKGHCKWFNVRMGFGFISMINREGNPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSPKGLESVRVTGPGGSPCLGSERRPKGKALQKRKPKGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHRVVTQLPPGSQGRQEAECQPCTSTSPREGGGGRGCTSPFPQEARSETAELPDRSPQEVSSVKAFVAAEEQNKKGPSIQKRKKP
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(5770221..5770254,5777274..5777455,5829888..5830072,5856619..5856985)
location: region:5770221-5856985:1
so has part: feature:5770221-5770254:1:exon
so has part: feature:5777274-5777455:1:exon
so has part: feature:5829888-5830072:1:exon
so has part: feature:5856619-5856985:1:exon

XP_036025122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5770221-5770254:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5777274-5777455:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5829888-5830072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5856619-5856985:1:exon

Lin28b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Lin28b
product: lin-28 homolog B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036169228.1
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(5775246..5776439,5777274..5777455,5829888..5830072,5831893..5831964,5856619..5861630)
location: region:5775246-5861630:1
so has part: feature:5775246-5776439:1:exon
so has part: feature:5777274-5777455:1:exon
so has part: feature:5829888-5830072:1:exon
so has part: feature:5831893-5831964:1:exon
so has part: feature:5856619-5861630:1:exon

position:5775246:1
position: 5775246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5775246-5776439:1:exon

position:5776439:1
position: 5776439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5777274-5777455:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5829888-5830072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5831893-5831964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5856619-5861630:1:exon

Lin28b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Lin28b
product: lin-28 homolog B, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036169230.1
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(5775246..5776439,5777274..5777455,5829888..5830072,5856619..5861630)
location: region:5775246-5861630:1
so has part: feature:5775246-5776439:1:exon
so has part: feature:5777274-5777455:1:exon
so has part: feature:5829888-5830072:1:exon
so has part: feature:5856619-5861630:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5775246-5776439:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5777274-5777455:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5829888-5830072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5856619-5861630:1:exon

Lin28b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Lin28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-28 homolog B isoform X2
translation: MAEGGASKGEEPEKLPELAEEESQVLHGKGHCKWFNVRMGFGFISMINREGNPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSPKGLESVRVTGPGGSPCLGSERRPKGKALQKRKPKGDRWRRQDLLMDQMWTVREEESRMIPRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHRVVTQLPPGSQGRQEAECQPCTSTSPREGGGGRGCTSPFPQEARSETAELPDRSPQEVSSVKAFVAAEEQNKKGPSIQKRKKP
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(5776430..5776439,5777274..5777455,5829888..5830072,5831893..5831964,5856619..5856985)
location: region:5776430-5856985:1
so has part: feature:5776430-5776439:1:exon
so has part: feature:5777274-5777455:1:exon
so has part: feature:5829888-5830072:1:exon
so has part: feature:5831893-5831964:1:exon
so has part: feature:5856619-5856985:1:exon

XP_036025121.1
type: Protein
SIO_000068: ncbiprotein

position:5776430:1
position: 5776430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5776430-5776439:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5777274-5777455:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5829888-5830072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5831893-5831964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5856619-5856985:1:exon

Lin28b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Lin28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-28 homolog B isoform X4
translation: MAEGGASKGEEPEKLPELAEEESQVLHGKGHCKWFNVRMGFGFISMINREGNPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSPKGLESVRVTGPGGSPCLGSERRPKGKALQKRKPKGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHRVVTQLPPGSQGRQEAECQPCTSTSPREGGGGRGCTSPFPQEARSETAELPDRSPQEVSSVKAFVAAEEQNKKGPSIQKRKKP
SIO_010081: Lin28b
subclass of: SO_0000673
so part of: Lin28b
location: join(5776430..5776439,5777274..5777455,5829888..5830072,5856619..5856985)
location: region:5776430-5856985:1
so has part: feature:5776430-5776439:1:exon
so has part: feature:5777274-5777455:1:exon
so has part: feature:5829888-5830072:1:exon
so has part: feature:5856619-5856985:1:exon

XP_036025123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5776430-5776439:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5777274-5777455:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5829888-5830072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5856619-5856985:1:exon

Bves
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Bves
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5869457..5907279)
location: region:5869457-5907279:-1
so has part: feature:5869457-5907279:-1:exon
subclass of: SO_0000010

118570476
type: Gene
SIO_000068: ncbigene

position:5869457:-1
position: 5869457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5907279:-1
position: 5907279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5869457-5907279:-1:exon

Bves
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Bves
product: blood vessel epicardial substance, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036168996.1
SIO_010081: Bves
subclass of: SO_0000673
so part of: Bves
location: complement(join(5869457..5872289,5888459..5888600,5889445..5889612,5895826..5895934,5896718..5896905,5899663..5899787,5904187..5904423,5905601..5905646,5907233..5907279))
location: region:5869457-5907279:-1
so has part: feature:5907233-5907279:-1:exon
so has part: feature:5905601-5905646:-1:exon
so has part: feature:5904187-5904423:-1:exon
so has part: feature:5899663-5899787:-1:exon
so has part: feature:5896718-5896905:-1:exon
so has part: feature:5895826-5895934:-1:exon
so has part: feature:5889445-5889612:-1:exon
so has part: feature:5888459-5888600:-1:exon
so has part: feature:5869457-5872289:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5907233-5907279:-1:exon

position:5907233:-1
position: 5907233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5905601-5905646:-1:exon

position:5905601:-1
position: 5905601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5905646:-1
position: 5905646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5904187-5904423:-1:exon

position:5904187:-1
position: 5904187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5904423:-1
position: 5904423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5899663-5899787:-1:exon

position:5899663:-1
position: 5899663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5899787:-1
position: 5899787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5896718-5896905:-1:exon

position:5896718:-1
position: 5896718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5896905:-1
position: 5896905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5895826-5895934:-1:exon

position:5895826:-1
position: 5895826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5895934:-1
position: 5895934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5889445-5889612:-1:exon

position:5889445:-1
position: 5889445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5889612:-1
position: 5889612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5888459-5888600:-1:exon

position:5888459:-1
position: 5888459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5888600:-1
position: 5888600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5869457-5872289:-1:exon

position:5872289:-1
position: 5872289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Bves
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Bves
product: blood vessel epicardial substance, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036168997.1
SIO_010081: Bves
subclass of: SO_0000673
so part of: Bves
location: complement(join(5869457..5872289,5888459..5888600,5889445..5889612,5895826..5895934,5896718..5896905,5899663..5899787,5904187..5904423,5904684..5904693))
location: region:5869457-5904693:-1
so has part: feature:5904684-5904693:-1:exon
so has part: feature:5904187-5904423:-1:exon
so has part: feature:5899663-5899787:-1:exon
so has part: feature:5896718-5896905:-1:exon
so has part: feature:5895826-5895934:-1:exon
so has part: feature:5889445-5889612:-1:exon
so has part: feature:5888459-5888600:-1:exon
so has part: feature:5869457-5872289:-1:exon

position:5904693:-1
position: 5904693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5904684-5904693:-1:exon

position:5904684:-1
position: 5904684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5904187-5904423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5899663-5899787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5896718-5896905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5895826-5895934:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5889445-5889612:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5888459-5888600:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5869457-5872289:-1:exon

Bves
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Bves
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: blood vessel epicardial substance
translation: MNYTESGPFAESIEAGFNSELGSVTPVPSNETTCENWREVHHLVFHVANICLAVGLVIPTTLRLHMILLRGMLSIGCTLYVVWATLYRCALDIMIWNSVFLGINILHLSYLLYKKRPVKIEKELGGVYHRLFEPLRVPPDLFRRLTGQFCMIQTLKKGQTYATEDKTSVDDRLSILLKGRMKVSYRGHFLHNIYPCAFIDSPEFRSTQMHKGEKFQVTIVADDNCRFLCWSRERLTYFLESEPFLYEIFRYLIGKDITNKLYSLNDPTLNDKKVKKLEPQMSLCTQITMLEMRNSITSSSDGEDGLHHFLRSSSSTSSLPVSPLQHRAPAKMKPIEEGAEDDDDEVFVQVSAGTLRTHRLY
SIO_010081: Bves
subclass of: SO_0000673
so part of: Bves
location: complement(join(5872162..5872289,5888459..5888600,5889445..5889612,5895826..5895934,5896718..5896905,5899663..5899787,5904187..5904412))
location: region:5872162-5904412:-1
so has part: feature:5904187-5904412:-1:exon
so has part: feature:5899663-5899787:-1:exon
so has part: feature:5896718-5896905:-1:exon
so has part: feature:5895826-5895934:-1:exon
so has part: feature:5889445-5889612:-1:exon
so has part: feature:5888459-5888600:-1:exon
so has part: feature:5872162-5872289:-1:exon

XP_036024889.1
type: Protein
SIO_000068: ncbiprotein

position:5872162:-1
position: 5872162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5904412:-1
position: 5904412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5904187-5904412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5899663-5899787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5896718-5896905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5895826-5895934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5889445-5889612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5888459-5888600:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5872162-5872289:-1:exon

Bves
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Bves
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: blood vessel epicardial substance
translation: MNYTESGPFAESIEAGFNSELGSVTPVPSNETTCENWREVHHLVFHVANICLAVGLVIPTTLRLHMILLRGMLSIGCTLYVVWATLYRCALDIMIWNSVFLGINILHLSYLLYKKRPVKIEKELGGVYHRLFEPLRVPPDLFRRLTGQFCMIQTLKKGQTYATEDKTSVDDRLSILLKGRMKVSYRGHFLHNIYPCAFIDSPEFRSTQMHKGEKFQVTIVADDNCRFLCWSRERLTYFLESEPFLYEIFRYLIGKDITNKLYSLNDPTLNDKKVKKLEPQMSLCTQITMLEMRNSITSSSDGEDGLHHFLRSSSSTSSLPVSPLQHRAPAKMKPIEEGAEDDDDEVFVQVSAGTLRTHRLY
SIO_010081: Bves
subclass of: SO_0000673
so part of: Bves
location: complement(join(5872162..5872289,5888459..5888600,5889445..5889612,5895826..5895934,5896718..5896905,5899663..5899787,5904187..5904412))
location: region:5872162-5904412:-1
so has part: feature:5904187-5904412:-1:exon
so has part: feature:5899663-5899787:-1:exon
so has part: feature:5896718-5896905:-1:exon
so has part: feature:5895826-5895934:-1:exon
so has part: feature:5889445-5889612:-1:exon
so has part: feature:5888459-5888600:-1:exon
so has part: feature:5872162-5872289:-1:exon

XP_036024890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5904187-5904412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5899663-5899787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5896718-5896905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5895826-5895934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5889445-5889612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5888459-5888600:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5872162-5872289:-1:exon

Popdc3
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Popdc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5928467..5963989)
location: region:5928467-5963989:-1
so has part: feature:5928467-5963989:-1:exon
subclass of: SO_0000010

118570199
type: Gene
SIO_000068: ncbigene

position:5928467:-1
position: 5928467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5963989:-1
position: 5963989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5928467-5963989:-1:exon

Popdc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Popdc3
product: popeye domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_036168544.1
SIO_010081: Popdc3
subclass of: SO_0000673
so part of: Popdc3
location: complement(join(5928467..5929434,5930502..5930610,5931670..5932385,5963816..5963989))
location: region:5928467-5963989:-1
so has part: feature:5963816-5963989:-1:exon
so has part: feature:5931670-5932385:-1:exon
so has part: feature:5930502-5930610:-1:exon
so has part: feature:5928467-5929434:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5963816-5963989:-1:exon

position:5963816:-1
position: 5963816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5931670-5932385:-1:exon

position:5931670:-1
position: 5931670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5932385:-1
position: 5932385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5930502-5930610:-1:exon

position:5930502:-1
position: 5930502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5930610:-1
position: 5930610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5928467-5929434:-1:exon

position:5929434:-1
position: 5929434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Popdc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Popdc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: popeye domain-containing protein 3
translation: MEKNSSLWKSLVGEHPVCTAWKEEAEGAIYQLASILFVVGFMGGSGFFGLLYVFSLLGLGFLCSAVWAWVDVCAADIFSWNFVLFVICFMQFVHIAYQVHSITFAREFQVLYSSLFKPLGIPVPVFRTIALSSEVVSLEKEHCYAMQGKTSIDRLSMLVSGRIRVTVDGEFLHYILPFQFLDSPEWDSLRPTEEGIFQVTLTAETDCRYVSWRRKKLYLLFAQHRYISRLFSILIGSDIADKLYALNDRVYTGKKHHYDIRLPNYYQMSSPDLSRSPLTEQFRNSRQHCNK
SIO_010081: Popdc3
subclass of: SO_0000673
so part of: Popdc3
location: complement(join(5929153..5929434,5930502..5930610,5931670..5932154))
location: region:5929153-5932154:-1
so has part: feature:5931670-5932154:-1:exon
so has part: feature:5930502-5930610:-1:exon
so has part: feature:5929153-5929434:-1:exon

XP_036024437.1
type: Protein
SIO_000068: ncbiprotein

position:5929153:-1
position: 5929153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5932154:-1
position: 5932154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5931670-5932154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5930502-5930610:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5929153-5929434:-1:exon

LOC118570525
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6098699..6202616)
location: region:6098699-6202616:-1
so has part: feature:6098699-6202616:-1:exon
subclass of: SO_0000010

118570525
type: Gene
SIO_000068: ncbigene

position:6098699:-1
position: 6098699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6202616:-1
position: 6202616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6098699-6202616:-1:exon

LOC118570525
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118570525
product: prolyl endopeptidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169082.1
SIO_010081: LOC118570525
subclass of: SO_0000673
so part of: LOC118570525
location: complement(join(6098699..6099439,6101746..6101902,6104191..6104322,6106731..6106825,6109101..6109237,6134407..6134510,6139904..6140101,6144022..6144213,6153056..6153161,6170048..6170169,6173703..6173912,6176027..6176157,6177757..6177890,6197705..6197779,6202510..6202616))
location: region:6098699-6202616:-1
so has part: feature:6202510-6202616:-1:exon
so has part: feature:6197705-6197779:-1:exon
so has part: feature:6177757-6177890:-1:exon
so has part: feature:6176027-6176157:-1:exon
so has part: feature:6173703-6173912:-1:exon
so has part: feature:6170048-6170169:-1:exon
so has part: feature:6153056-6153161:-1:exon
so has part: feature:6144022-6144213:-1:exon
so has part: feature:6139904-6140101:-1:exon
so has part: feature:6134407-6134510:-1:exon
so has part: feature:6109101-6109237:-1:exon
so has part: feature:6106731-6106825:-1:exon
so has part: feature:6104191-6104322:-1:exon
so has part: feature:6101746-6101902:-1:exon
so has part: feature:6098699-6099439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6202510-6202616:-1:exon

position:6202510:-1
position: 6202510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6197705-6197779:-1:exon

position:6197705:-1
position: 6197705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6197779:-1
position: 6197779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6177757-6177890:-1:exon

position:6177757:-1
position: 6177757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6177890:-1
position: 6177890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6176027-6176157:-1:exon

position:6176027:-1
position: 6176027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6176157:-1
position: 6176157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6173703-6173912:-1:exon

position:6173703:-1
position: 6173703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6173912:-1
position: 6173912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6170048-6170169:-1:exon

position:6170048:-1
position: 6170048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6170169:-1
position: 6170169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6153056-6153161:-1:exon

position:6153056:-1
position: 6153056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6153161:-1
position: 6153161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6144022-6144213:-1:exon

position:6144022:-1
position: 6144022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6144213:-1
position: 6144213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6139904-6140101:-1:exon

position:6139904:-1
position: 6139904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6140101:-1
position: 6140101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6134407-6134510:-1:exon

position:6134407:-1
position: 6134407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6134510:-1
position: 6134510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6109101-6109237:-1:exon

position:6109101:-1
position: 6109101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6109237:-1
position: 6109237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6106731-6106825:-1:exon

position:6106731:-1
position: 6106731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6106825:-1
position: 6106825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6104191-6104322:-1:exon

position:6104191:-1
position: 6104191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6104322:-1
position: 6104322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6101746-6101902:-1:exon

position:6101746:-1
position: 6101746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6101902:-1
position: 6101902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6098699-6099439:-1:exon

position:6099439:-1
position: 6099439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118570525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118570525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prolyl endopeptidase
translation: MLSFQYPDVYRDETAVQDYHGHKICDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNTLSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFTCMAWTHDGKGMFYNSYPQQDGKSDGTETSTNLHQKLCYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIWEGCDPVNRLWYCDLQQGSDGITGILNWVKLIDNFEGEYDYVTNEGTVFTFKTNRNSPNYRLINIDFTDPDESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNILQLHDLTTGALLKTFPLDVGSVVGYSGRKKDSEIFYQFTSFLSPGVIYHCDLTKEELEPMVFREVTVKGIDASDYQTIQVFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLVKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDMLKFHKFTIGHAWTTDYGCSDSKQHFEWLLKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQSNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNIEWIQ
SIO_010081: LOC118570525
subclass of: SO_0000673
so part of: LOC118570525
location: complement(join(6099145..6099439,6101746..6101902,6104191..6104322,6106731..6106825,6109101..6109237,6134407..6134510,6139904..6140101,6144022..6144213,6153056..6153161,6170048..6170169,6173703..6173912,6176027..6176157,6177757..6177890,6197705..6197779,6202510..6202554))
location: region:6099145-6202554:-1
so has part: feature:6202510-6202554:-1:exon
so has part: feature:6197705-6197779:-1:exon
so has part: feature:6177757-6177890:-1:exon
so has part: feature:6176027-6176157:-1:exon
so has part: feature:6173703-6173912:-1:exon
so has part: feature:6170048-6170169:-1:exon
so has part: feature:6153056-6153161:-1:exon
so has part: feature:6144022-6144213:-1:exon
so has part: feature:6139904-6140101:-1:exon
so has part: feature:6134407-6134510:-1:exon
so has part: feature:6109101-6109237:-1:exon
so has part: feature:6106731-6106825:-1:exon
so has part: feature:6104191-6104322:-1:exon
so has part: feature:6101746-6101902:-1:exon
so has part: feature:6099145-6099439:-1:exon

XP_036024975.1
type: Protein
SIO_000068: ncbiprotein

position:6099145:-1
position: 6099145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6202554:-1
position: 6202554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6202510-6202554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6197705-6197779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6177757-6177890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6176027-6176157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6173703-6173912:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6170048-6170169:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6153056-6153161:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6144022-6144213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6139904-6140101:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6134407-6134510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6109101-6109237:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6106731-6106825:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6104191-6104322:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6101746-6101902:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6099145-6099439:-1:exon

LOC118570232
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6553051..6553561
location: region:6553051-6553561:1
so has part: feature:6553051-6553561:1:exon

118570232
type: Gene
SIO_000068: ncbigene

position:6553051:1
position: 6553051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6553561:1
position: 6553561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6553051-6553561:1:exon

LOC118570232
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570232
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC118570232
subclass of: SO_0000673
so part of: LOC118570232
location: 6553051..6553561
location: region:6553051-6553561:1
so has part: feature:6553051-6553561:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6553051-6553561:1:exon

Prdm1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Prdm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6809079..6830723
location: region:6809079-6830723:1
so has part: feature:6809079-6830723:1:exon
subclass of: SO_0000010

118570484
type: Gene
SIO_000068: ncbigene

position:6809079:1
position: 6809079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6830723:1
position: 6830723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6809079-6830723:1:exon

Prdm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Prdm1
product: PR/SET domain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036169011.1
SIO_010081: Prdm1
subclass of: SO_0000673
so part of: Prdm1
location: join(6809079..6809313,6810906..6811154,6817664..6817783,6820909..6821161,6825893..6826986,6827207..6827335,6827701..6830723)
location: region:6809079-6830723:1
so has part: feature:6809079-6809313:1:exon
so has part: feature:6810906-6811154:1:exon
so has part: feature:6817664-6817783:1:exon
so has part: feature:6820909-6821161:1:exon
so has part: feature:6825893-6826986:1:exon
so has part: feature:6827207-6827335:1:exon
so has part: feature:6827701-6830723:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6809079-6809313:1:exon

position:6809313:1
position: 6809313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6810906-6811154:1:exon

position:6810906:1
position: 6810906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6811154:1
position: 6811154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6817664-6817783:1:exon

position:6817664:1
position: 6817664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6817783:1
position: 6817783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6820909-6821161:1:exon

position:6820909:1
position: 6820909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6821161:1
position: 6821161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6825893-6826986:1:exon

position:6825893:1
position: 6825893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6826986:1
position: 6826986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6827207-6827335:1:exon

position:6827207:1
position: 6827207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6827335:1
position: 6827335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6827701-6830723:1:exon

position:6827701:1
position: 6827701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Prdm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Prdm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 1
translation: MLDLLLEKRVGTTLAAPKCSSSPVKFQGLAERTGIMKMDMEDADMTLWTEAEFEEKCTYIVNDHPWDSGADGGTSLQAEASLPRNLLFKYAATNSKEVIGVVSKEYIPQGTRFGPLIGEIYTNDTVPKNANRKYFWRIYSREEFHHFIDGFNEEKSNWMRYVNPAHSAREQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFAERLHYPYPGELTVMNLTQTESNPKQYSSGKNELYPKNVPKREYSVKEILKLDSNPSKRKDFYRSDISPLTSEKDMDGFRKNGSPDTPFYPRVVYPIRAPLPEDYLKASLAYGIERPTYITHSPLLSSTTPSPPASSSPEQSLKSSSPHSSPGNTVSPLAPGPPEPRDSYPYLNVSYGSEGLGSYHGYAPAPHLPPAFIPSYNAHYPKFLLPPYGLSSNGLSTMSNINGINNFSLFPRLYPVYSNLLGGGNLPHPMLNPASLPSSLPSDGARRLLPPEHPIPAPHSAFSLTGAAASMKDESSPPSGSPTAGTAATPEHVVQPKATSAVMAAPSTDGAMNLIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKVCPAKFTQFVHLKLHKRLHTRERPHKCAQCHKSYIHLCSLKVHLKGNCPVAPATGLPLEDLTRINEEIEKFDISDNADRLEDMEDNMDVTSLVEKEILSVVSKEKEETGLKVSLQRNMGTGLLSSGCSLYESSDLSLMKLPHSKPLPLVPVKVKQETVEPMDP
SIO_010081: Prdm1
subclass of: SO_0000673
so part of: Prdm1
location: join(6809272..6809313,6810906..6811154,6817664..6817783,6820909..6821161,6825893..6826986,6827207..6827335,6827701..6828276)
location: region:6809272-6828276:1
so has part: feature:6809272-6809313:1:exon
so has part: feature:6810906-6811154:1:exon
so has part: feature:6817664-6817783:1:exon
so has part: feature:6820909-6821161:1:exon
so has part: feature:6825893-6826986:1:exon
so has part: feature:6827207-6827335:1:exon
so has part: feature:6827701-6828276:1:exon

XP_036024904.1
type: Protein
SIO_000068: ncbiprotein

position:6809272:1
position: 6809272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6828276:1
position: 6828276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6809272-6809313:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6810906-6811154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6817664-6817783:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6820909-6821161:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6825893-6826986:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6827207-6827335:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6827701-6828276:1:exon

Atg5
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Atg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6902949..7046145)
location: region:6902949-7046145:-1
so has part: feature:6902949-7046145:-1:exon
subclass of: SO_0000010

118570627
type: Gene
SIO_000068: ncbigene

position:6902949:-1
position: 6902949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7046145:-1
position: 7046145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6902949-7046145:-1:exon

Atg5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Atg5
product: autophagy related 5, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_036169304.1
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6902949..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001468,7045926..7046145))
location: region:6902949-7046145:-1
so has part: feature:7045926-7046145:-1:exon
so has part: feature:7001303-7001468:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6902949-6904326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7045926-7046145:-1:exon

position:7045926:-1
position: 7045926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7001303-7001468:-1:exon

position:7001303:-1
position: 7001303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7001468:-1
position: 7001468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6998242-6998369:-1:exon

position:6998242:-1
position: 6998242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6998369:-1
position: 6998369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6992309-6992387:-1:exon

position:6992309:-1
position: 6992309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6992387:-1
position: 6992387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6983346-6983508:-1:exon

position:6983346:-1
position: 6983346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6983508:-1
position: 6983508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6948668-6948762:-1:exon

position:6948668:-1
position: 6948668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6948762:-1
position: 6948762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6921234-6921351:-1:exon

position:6921234:-1
position: 6921234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6921351:-1
position: 6921351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6902949-6904326:-1:exon

position:6904326:-1
position: 6904326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Atg5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Atg5
product: autophagy related 5, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_036169305.1
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6902949..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001468,7018338..7018493))
location: region:6902949-7018493:-1
so has part: feature:7018338-7018493:-1:exon
so has part: feature:7001303-7001468:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6902949-6904326:-1:exon

position:7018493:-1
position: 7018493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7018338-7018493:-1:exon

position:7018338:-1
position: 7018338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7001303-7001468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6902949-6904326:-1:exon

Atg5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Atg5
product: autophagy related 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169298.1
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6902949..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001468,7018265..7018493))
location: region:6902949-7018493:-1
so has part: feature:7018265-7018493:-1:exon
so has part: feature:7001303-7001468:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6902949-6904326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7018265-7018493:-1:exon

position:7018265:-1
position: 7018265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7001303-7001468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6902949-6904326:-1:exon

Atg5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Atg5
product: autophagy related 5, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_036169303.1
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6902949..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001468,7004153..7004190,7018265..7018493))
location: region:6902949-7018493:-1
so has part: feature:7018265-7018493:-1:exon
so has part: feature:7004153-7004190:-1:exon
so has part: feature:7001303-7001468:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6902949-6904326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7018265-7018493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7004153-7004190:-1:exon

position:7004153:-1
position: 7004153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7004190:-1
position: 7004190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7001303-7001468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6902949-6904326:-1:exon

Atg5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Atg5
product: autophagy related 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_036169300.1
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6902949..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001468,7002566..7002629,7004153..7004190,7018265..7018493))
location: region:6902949-7018493:-1
so has part: feature:7018265-7018493:-1:exon
so has part: feature:7004153-7004190:-1:exon
so has part: feature:7002566-7002629:-1:exon
so has part: feature:7001303-7001468:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6902949-6904326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7018265-7018493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7004153-7004190:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7002566-7002629:-1:exon

position:7002566:-1
position: 7002566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7002629:-1
position: 7002629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7001303-7001468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6902949-6904326:-1:exon

Atg5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Atg5
product: autophagy related 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_036169302.1
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6902949..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001468,7011912..7012011,7018265..7018493))
location: region:6902949-7018493:-1
so has part: feature:7018265-7018493:-1:exon
so has part: feature:7011912-7012011:-1:exon
so has part: feature:7001303-7001468:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6902949-6904326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7018265-7018493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7011912-7012011:-1:exon

position:7011912:-1
position: 7011912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7012011:-1
position: 7012011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7001303-7001468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6902949-6904326:-1:exon

Atg5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Atg5
product: autophagy related 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_036169301.1
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6902949..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001468,7004153..7004190,7011912..7012011,7018265..7018493))
location: region:6902949-7018493:-1
so has part: feature:7018265-7018493:-1:exon
so has part: feature:7011912-7012011:-1:exon
so has part: feature:7004153-7004190:-1:exon
so has part: feature:7001303-7001468:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6902949-6904326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7018265-7018493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7011912-7012011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7004153-7004190:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7001303-7001468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6902949-6904326:-1:exon

Atg5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Atg5
product: autophagy related 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_036169299.1
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6902949..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001468,7002566..7002629,7004153..7004190,7011912..7012011,7018265..7018493))
location: region:6902949-7018493:-1
so has part: feature:7018265-7018493:-1:exon
so has part: feature:7011912-7012011:-1:exon
so has part: feature:7004153-7004190:-1:exon
so has part: feature:7002566-7002629:-1:exon
so has part: feature:7001303-7001468:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6902949-6904326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7018265-7018493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7011912-7012011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7004153-7004190:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7002566-7002629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7001303-7001468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6902949-6904326:-1:exon

Atg5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Atg5
product: autophagy related 5, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_036169306.1
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6902949..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001468,7018056..7018218))
location: region:6902949-7018218:-1
so has part: feature:7018056-7018218:-1:exon
so has part: feature:7001303-7001468:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6902949-6904326:-1:exon

position:7018218:-1
position: 7018218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7018056-7018218:-1:exon

position:7018056:-1
position: 7018056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7001303-7001468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6902949-6904326:-1:exon

Atg5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Atg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy protein 5
translation: MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKAMRQEDVSEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDTVEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAVTPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIVPQPTD
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6904190..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001410))
location: region:6904190-7001410:-1
so has part: feature:7001303-7001410:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6904190-6904326:-1:exon

XP_036025191.1
type: Protein
SIO_000068: ncbiprotein

position:6904190:-1
position: 6904190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7001410:-1
position: 7001410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7001303-7001410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6904190-6904326:-1:exon

Atg5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Atg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy protein 5
translation: MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKAMRQEDVSEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDTVEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAVTPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIVPQPTD
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6904190..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001410))
location: region:6904190-7001410:-1
so has part: feature:7001303-7001410:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6904190-6904326:-1:exon

XP_036025192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7001303-7001410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6904190-6904326:-1:exon

Atg5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Atg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy protein 5
translation: MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKAMRQEDVSEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDTVEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAVTPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIVPQPTD
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6904190..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001410))
location: region:6904190-7001410:-1
so has part: feature:7001303-7001410:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6904190-6904326:-1:exon

XP_036025193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7001303-7001410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6904190-6904326:-1:exon

Atg5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Atg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy protein 5
translation: MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKAMRQEDVSEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDTVEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAVTPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIVPQPTD
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6904190..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001410))
location: region:6904190-7001410:-1
so has part: feature:7001303-7001410:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6904190-6904326:-1:exon

XP_036025194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7001303-7001410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6904190-6904326:-1:exon

Atg5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Atg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy protein 5
translation: MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKAMRQEDVSEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDTVEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAVTPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIVPQPTD
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6904190..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001410))
location: region:6904190-7001410:-1
so has part: feature:7001303-7001410:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6904190-6904326:-1:exon

XP_036025195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7001303-7001410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6904190-6904326:-1:exon

Atg5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Atg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy protein 5
translation: MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKAMRQEDVSEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDTVEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAVTPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIVPQPTD
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6904190..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001410))
location: region:6904190-7001410:-1
so has part: feature:7001303-7001410:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6904190-6904326:-1:exon

XP_036025196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7001303-7001410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6904190-6904326:-1:exon

Atg5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Atg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy protein 5
translation: MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKAMRQEDVSEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDTVEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAVTPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIVPQPTD
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6904190..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001410))
location: region:6904190-7001410:-1
so has part: feature:7001303-7001410:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6904190-6904326:-1:exon

XP_036025197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7001303-7001410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6904190-6904326:-1:exon

Atg5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Atg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy protein 5
translation: MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKAMRQEDVSEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDTVEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAVTPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIVPQPTD
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6904190..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001410))
location: region:6904190-7001410:-1
so has part: feature:7001303-7001410:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6904190-6904326:-1:exon

XP_036025198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7001303-7001410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6904190-6904326:-1:exon

Atg5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Atg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy protein 5
translation: MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKAMRQEDVSEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDTVEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPPEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAVTPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIVPQPTD
SIO_010081: Atg5
subclass of: SO_0000673
so part of: Atg5
location: complement(join(6904190..6904326,6921234..6921351,6948668..6948762,6983346..6983508,6992309..6992387,6998242..6998369,7001303..7001410))
location: region:6904190-7001410:-1
so has part: feature:7001303-7001410:-1:exon
so has part: feature:6998242-6998369:-1:exon
so has part: feature:6992309-6992387:-1:exon
so has part: feature:6983346-6983508:-1:exon
so has part: feature:6948668-6948762:-1:exon
so has part: feature:6921234-6921351:-1:exon
so has part: feature:6904190-6904326:-1:exon

XP_036025199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7001303-7001410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6998242-6998369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6992309-6992387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6983346-6983508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6948668-6948762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6921234-6921351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6904190-6904326:-1:exon

Crybg1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Crybg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7142967..7198007
location: region:7142967-7198007:1
so has part: feature:7142967-7198007:1:exon
subclass of: SO_0000010

118570185
type: Gene
SIO_000068: ncbigene

position:7142967:1
position: 7142967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7198007:1
position: 7198007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7142967-7198007:1:exon

Crybg1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Crybg1
product: crystallin beta-gamma domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036168529.1
SIO_010081: Crybg1
subclass of: SO_0000673
so part of: Crybg1
location: join(7142967..7144423,7149826..7152121,7156174..7156221,7156305..7156423,7158370..7158529,7160976..7161115,7169998..7170124,7172223..7172258,7173458..7173615,7174660..7174786,7174888..7175033,7181006..7181132,7181316..7181348,7182423..7182535,7184465..7184594,7187504..7187643,7190063..7190186,7190624..7190782,7192468..7192630,7196649..7198007)
location: region:7142967-7198007:1
so has part: feature:7142967-7144423:1:exon
so has part: feature:7149826-7152121:1:exon
so has part: feature:7156174-7156221:1:exon
so has part: feature:7156305-7156423:1:exon
so has part: feature:7158370-7158529:1:exon
so has part: feature:7160976-7161115:1:exon
so has part: feature:7169998-7170124:1:exon
so has part: feature:7172223-7172258:1:exon
so has part: feature:7173458-7173615:1:exon
so has part: feature:7174660-7174786:1:exon
so has part: feature:7174888-7175033:1:exon
so has part: feature:7181006-7181132:1:exon
so has part: feature:7181316-7181348:1:exon
so has part: feature:7182423-7182535:1:exon
so has part: feature:7184465-7184594:1:exon
so has part: feature:7187504-7187643:1:exon
so has part: feature:7190063-7190186:1:exon
so has part: feature:7190624-7190782:1:exon
so has part: feature:7192468-7192630:1:exon
so has part: feature:7196649-7198007:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7142967-7144423:1:exon

position:7144423:1
position: 7144423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7149826-7152121:1:exon

position:7149826:1
position: 7149826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7152121:1
position: 7152121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7156174-7156221:1:exon

position:7156174:1
position: 7156174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7156221:1
position: 7156221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7156305-7156423:1:exon

position:7156305:1
position: 7156305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7156423:1
position: 7156423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7158370-7158529:1:exon

position:7158370:1
position: 7158370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7158529:1
position: 7158529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7160976-7161115:1:exon

position:7160976:1
position: 7160976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7161115:1
position: 7161115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7169998-7170124:1:exon

position:7169998:1
position: 7169998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7170124:1
position: 7170124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7172223-7172258:1:exon

position:7172223:1
position: 7172223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7172258:1
position: 7172258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7173458-7173615:1:exon

position:7173458:1
position: 7173458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7173615:1
position: 7173615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7174660-7174786:1:exon

position:7174660:1
position: 7174660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7174786:1
position: 7174786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7174888-7175033:1:exon

position:7174888:1
position: 7174888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7175033:1
position: 7175033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7181006-7181132:1:exon

position:7181006:1
position: 7181006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7181132:1
position: 7181132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7181316-7181348:1:exon

position:7181316:1
position: 7181316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7181348:1
position: 7181348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7182423-7182535:1:exon

position:7182423:1
position: 7182423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7182535:1
position: 7182535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7184465-7184594:1:exon

position:7184465:1
position: 7184465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7184594:1
position: 7184594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7187504-7187643:1:exon

position:7187504:1
position: 7187504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7187643:1
position: 7187643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7190063-7190186:1:exon

position:7190063:1
position: 7190063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7190186:1
position: 7190186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7190624-7190782:1:exon

position:7190624:1
position: 7190624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7190782:1
position: 7190782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7192468-7192630:1:exon

position:7192468:1
position: 7192468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7192630:1
position: 7192630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7196649-7198007:1:exon

position:7196649:1
position: 7196649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Crybg1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Crybg1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta/gamma crystallin domain-containing protein 1
translation: MEKRSSGRRSGRRRKSQKSTDSPGADAVAPESSAKDDAVFDDEVAPDAAAENGSAERKVKSAHATPDAVTSPEPKASAGPRGQLRGEPDRGKQLPPASSPTKRRGRSRVPEAVPSVGPRAPAKESPPKRAPAAADGGEEAGRVVPRELTVKSSSLLPEIKPEHKRGPLPHHFDGRGDGGRTRESGRGAGASDTDGLKPRNHFGVGRSTVTTKVTLPARPKHVELNLKTAKNPDSLGNEHNPFSQPVHKGNTANKISLFENKRANSSPRHPDIRSTRNNPPSNKTFVGRAKLNLAKKAKEMEQPEKKALSTSHQNGLVAKEPSTEAKGTEVPSPGEDLPAARGGEGEPTKDQVLCPEPDQSDKADVQTDAACLSQPVPTAMVPVTDPELSGEDCSGAADSKNLVLDNMSSTAQDIPAILNATEPPPKPQGAFSDSQPASESSTESSCLPSAPIPEDTLQDGCVQVPIPSFPCTDLKVSENHNECDVPVSPHTEKMPVSKLGGGEASPTSPPEHSSEIVGNACPSKVLVQVRSFVLPVESPQDVSSQVISESSEVREVQLPSCHNHEFEVVSVAPCPPQPGDVPGTSPVHTHHREEHVAQSEKALPVQTQSQSSGTSLTAEFSPIHSPSSKSHSESPQRPGQNVTSQNTPTSLLNVSASSDDSVFDSSSDMEKFTEIIKNMDSTICVPQKKKKARIPNSPAPHFAMPPIHEDTLEKVFDPNVFTIGLGKKKESQPELSPALHLMQDHDPLSKLRAKRASTEQSVLFKSLHTNTNGKNEPQTTSDMNDKENRDITNLGVKRSRLEKSTLFSSMLSSLPQDKIFSPSVTSVNTMTTSFSTSQNSSVPQSAVAQPRKEGDPPCGSDKEQPHLAPHNSLKVFNFNSSNTSHPSLKSPSLMEKYPQREETKEDLNSRSNLPLPEYKRSDFPKLKNSDDMEKPNLIENVLKPNVPNIGATDTDVLSLFKPSRYDPGLSFSGMSLADPMMLRGSVHNKLNPRPGKIVIFSEPDVSEECIEVFRDMEDCSSWRLSPVILVKVVRGCWILYEKANFEGHSIALEEGELELSGLWGMEDILDEEAESDKPVVIGSIRHVVQDYRISQIDLFTEPEGLGLLNSYFDDTEEMQGFGVMQKTCSIKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEEAYIGSMRPLKMGGRKVEFPTDPKVIIYEKPSFEGRCMELETEMCSLVTEGGETEETAGNDHLPFTSVGSMKVLRGIWVAYEKCDFTGHQYLLEEGEYRDWKDWGGYGAELQSLRPILSDFSNAHMVMYSEKNFGSKSSSIDVLGIVANLKETGYGVKTQSVNVLSGVWVAYENPDFTGEQYVLDKGLYTSFEDWGGKNCKISSVQPICLDSFTGPRRRNQIHLFSEPQFQGQSQSFEETINHIDDSFLTKSCRVLGGSWVAYDGENFSGNQYVLEEGHYPCLSAMGCLPGATLKSLRFIDVEFSEPTIILFERENFKGKKIELNAETVNLRSMGFNTQIRSVQVIGGIWVTYEYGNYRGRQFLLSPAEVPNWYEFSGCRQIGSLRPFIQKRIYFRLRNKATGLFMSTNGNLEDLKLLRIQVMEDVGADDQIWVYQEGCIKCRIAEDCCLTIVGSLVTSGSKLGLALDQNADSQFWCMKSDGRIYSKSKPHLVLDVKGGAQYDQNHIILNTVNTEKLTQVWEAMVL
SIO_010081: Crybg1
subclass of: SO_0000673
so part of: Crybg1
location: join(7143780..7144423,7149826..7152121,7156174..7156221,7156305..7156423,7158370..7158529,7160976..7161115,7169998..7170124,7172223..7172258,7173458..7173615,7174660..7174786,7174888..7175033,7181006..7181132,7181316..7181348,7182423..7182535,7184465..7184594,7187504..7187643,7190063..7190186,7190624..7190782,7192468..7192630,7196649..7196737)
location: region:7143780-7196737:1
so has part: feature:7143780-7144423:1:exon
so has part: feature:7149826-7152121:1:exon
so has part: feature:7156174-7156221:1:exon
so has part: feature:7156305-7156423:1:exon
so has part: feature:7158370-7158529:1:exon
so has part: feature:7160976-7161115:1:exon
so has part: feature:7169998-7170124:1:exon
so has part: feature:7172223-7172258:1:exon
so has part: feature:7173458-7173615:1:exon
so has part: feature:7174660-7174786:1:exon
so has part: feature:7174888-7175033:1:exon
so has part: feature:7181006-7181132:1:exon
so has part: feature:7181316-7181348:1:exon
so has part: feature:7182423-7182535:1:exon
so has part: feature:7184465-7184594:1:exon
so has part: feature:7187504-7187643:1:exon
so has part: feature:7190063-7190186:1:exon
so has part: feature:7190624-7190782:1:exon
so has part: feature:7192468-7192630:1:exon
so has part: feature:7196649-7196737:1:exon

XP_036024422.1
type: Protein
SIO_000068: ncbiprotein

position:7143780:1
position: 7143780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7196737:1
position: 7196737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7143780-7144423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7149826-7152121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7156174-7156221:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7156305-7156423:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7158370-7158529:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7160976-7161115:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7169998-7170124:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7172223-7172258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7173458-7173615:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7174660-7174786:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7174888-7175033:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7181006-7181132:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7181316-7181348:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7182423-7182535:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7184465-7184594:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7187504-7187643:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7190063-7190186:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7190624-7190782:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7192468-7192630:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7196649-7196737:1:exon

LOC118570186
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570186
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7177977..7178391
location: region:7177977-7178391:1
so has part: feature:7177977-7178391:1:exon

118570186
type: Gene
SIO_000068: ncbigene

position:7177977:1
position: 7177977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7178391:1
position: 7178391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7177977-7178391:1:exon

LOC118570186
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570186
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118570186
subclass of: SO_0000673
so part of: LOC118570186
location: 7177977..7178391
location: region:7177977-7178391:1
so has part: feature:7177977-7178391:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7177977-7178391:1:exon

Rtn4ip1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Rtn4ip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7201652..7243833)
location: region:7201652-7243833:-1
so has part: feature:7201652-7243833:-1:exon
subclass of: SO_0000010

118570373
type: Gene
SIO_000068: ncbigene

position:7201652:-1
position: 7201652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7243833:-1
position: 7243833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7201652-7243833:-1:exon

Rtn4ip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Rtn4ip1
product: reticulon 4 interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036168789.1
SIO_010081: Rtn4ip1
subclass of: SO_0000673
so part of: Rtn4ip1
location: complement(join(7201652..7201777,7212627..7212719,7216000..7216183,7222442..7222578,7228412..7228460,7235991..7236115,7236940..7237008,7238694..7238845,7243129..7243833))
location: region:7201652-7243833:-1
so has part: feature:7243129-7243833:-1:exon
so has part: feature:7238694-7238845:-1:exon
so has part: feature:7236940-7237008:-1:exon
so has part: feature:7235991-7236115:-1:exon
so has part: feature:7228412-7228460:-1:exon
so has part: feature:7222442-7222578:-1:exon
so has part: feature:7216000-7216183:-1:exon
so has part: feature:7212627-7212719:-1:exon
so has part: feature:7201652-7201777:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7243129-7243833:-1:exon

position:7243129:-1
position: 7243129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7238694-7238845:-1:exon

position:7238694:-1
position: 7238694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7238845:-1
position: 7238845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7236940-7237008:-1:exon

position:7236940:-1
position: 7236940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7237008:-1
position: 7237008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7235991-7236115:-1:exon

position:7235991:-1
position: 7235991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7236115:-1
position: 7236115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7228412-7228460:-1:exon

position:7228412:-1
position: 7228412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7228460:-1
position: 7228460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7222442-7222578:-1:exon

position:7222442:-1
position: 7222442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7222578:-1
position: 7222578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7216000-7216183:-1:exon

position:7216000:-1
position: 7216000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7216183:-1
position: 7216183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7212627-7212719:-1:exon

position:7212627:-1
position: 7212627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7212719:-1
position: 7212719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7201652-7201777:-1:exon

position:7201777:-1
position: 7201777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rtn4ip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Rtn4ip1
product: reticulon 4 interacting protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_036168791.1
SIO_010081: Rtn4ip1
subclass of: SO_0000673
so part of: Rtn4ip1
location: complement(join(7201652..7201777,7212627..7212719,7216000..7216183,7222442..7222578,7228412..7228460,7235991..7236115,7236940..7237008,7238694..7238845,7243520..7243832))
location: region:7201652-7243832:-1
so has part: feature:7243520-7243832:-1:exon
so has part: feature:7238694-7238845:-1:exon
so has part: feature:7236940-7237008:-1:exon
so has part: feature:7235991-7236115:-1:exon
so has part: feature:7228412-7228460:-1:exon
so has part: feature:7222442-7222578:-1:exon
so has part: feature:7216000-7216183:-1:exon
so has part: feature:7212627-7212719:-1:exon
so has part: feature:7201652-7201777:-1:exon

position:7243832:-1
position: 7243832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7243520-7243832:-1:exon

position:7243520:-1
position: 7243520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7238694-7238845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7236940-7237008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7235991-7236115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7228412-7228460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7222442-7222578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7216000-7216183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7212627-7212719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7201652-7201777:-1:exon

Rtn4ip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Rtn4ip1
product: reticulon 4 interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_036168790.1
SIO_010081: Rtn4ip1
subclass of: SO_0000673
so part of: Rtn4ip1
location: complement(join(7201652..7201777,7212627..7212719,7216000..7216183,7222442..7222578,7228412..7228460,7235991..7236115,7236940..7237008,7238694..7238845,7243478..7243832))
location: region:7201652-7243832:-1
so has part: feature:7243478-7243832:-1:exon
so has part: feature:7238694-7238845:-1:exon
so has part: feature:7236940-7237008:-1:exon
so has part: feature:7235991-7236115:-1:exon
so has part: feature:7228412-7228460:-1:exon
so has part: feature:7222442-7222578:-1:exon
so has part: feature:7216000-7216183:-1:exon
so has part: feature:7212627-7212719:-1:exon
so has part: feature:7201652-7201777:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7243478-7243832:-1:exon

position:7243478:-1
position: 7243478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7238694-7238845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7236940-7237008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7235991-7236115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7228412-7228460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7222442-7222578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7216000-7216183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7212627-7212719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7201652-7201777:-1:exon

Rtn4ip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Rtn4ip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-4-interacting protein 1, mitochondrial isoform X1
translation: MEVLKSCVLRRSARAAAAACFWRSKVIPKRPFREISTTPARSTVMPAWVIDKYGKNEVLRFTQSMLLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATALNMKRDPLHIRTKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSTKNCMGKRALILGASGGVGTFAIQIMKAWGAHVTAVCSQDASELVRKLGADEVIDYTLGSVEEQLKSFKLFDFILDNVGGSTETWALNFLKKWSGATYVTLVTPFLLNMDQLGIADGMLQTGVTMGTKTLKHFWQGVHYRWAFFMASGPYLDEIAELVDAGKIRPVIEQTFPFSEVPEAFLKVERGHARGKTVVNVI
SIO_010081: Rtn4ip1
subclass of: SO_0000673
so part of: Rtn4ip1
location: complement(join(7201670..7201777,7212627..7212719,7216000..7216183,7222442..7222578,7228412..7228460,7235991..7236115,7236940..7237008,7238694..7238845,7243129..7243408))
location: region:7201670-7243408:-1
so has part: feature:7243129-7243408:-1:exon
so has part: feature:7238694-7238845:-1:exon
so has part: feature:7236940-7237008:-1:exon
so has part: feature:7235991-7236115:-1:exon
so has part: feature:7228412-7228460:-1:exon
so has part: feature:7222442-7222578:-1:exon
so has part: feature:7216000-7216183:-1:exon
so has part: feature:7212627-7212719:-1:exon
so has part: feature:7201670-7201777:-1:exon

XP_036024682.1
type: Protein
SIO_000068: ncbiprotein

position:7201670:-1
position: 7201670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7243408:-1
position: 7243408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7243129-7243408:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7238694-7238845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7236940-7237008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7235991-7236115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7228412-7228460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7222442-7222578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7216000-7216183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7212627-7212719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7201670-7201777:-1:exon

Rtn4ip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Rtn4ip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-4-interacting protein 1, mitochondrial isoform X2
translation: MKRDPLHIRTKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSTKNCMGKRALILGASGGVGTFAIQIMKAWGAHVTAVCSQDASELVRKLGADEVIDYTLGSVEEQLKSFKLFDFILDNVGGSTETWALNFLKKWSGATYVTLVTPFLLNMDQLGIADGMLQTGVTMGTKTLKHFWQGVHYRWAFFMASGPYLDEIAELVDAGKIRPVIEQTFPFSEVPEAFLKVERGHARGKTVVNVI
SIO_010081: Rtn4ip1
subclass of: SO_0000673
so part of: Rtn4ip1
location: complement(join(7201670..7201777,7212627..7212719,7216000..7216183,7222442..7222578,7228412..7228460,7235991..7236115,7236940..7237008,7238694..7238819))
location: region:7201670-7238819:-1
so has part: feature:7238694-7238819:-1:exon
so has part: feature:7236940-7237008:-1:exon
so has part: feature:7235991-7236115:-1:exon
so has part: feature:7228412-7228460:-1:exon
so has part: feature:7222442-7222578:-1:exon
so has part: feature:7216000-7216183:-1:exon
so has part: feature:7212627-7212719:-1:exon
so has part: feature:7201670-7201777:-1:exon

XP_036024683.1
type: Protein
SIO_000068: ncbiprotein

position:7238819:-1
position: 7238819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7238694-7238819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7236940-7237008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7235991-7236115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7228412-7228460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7222442-7222578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7216000-7216183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7212627-7212719:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7201670-7201777:-1:exon

Rtn4ip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Rtn4ip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-4-interacting protein 1, mitochondrial isoform X2
translation: MKRDPLHIRTKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSTKNCMGKRALILGASGGVGTFAIQIMKAWGAHVTAVCSQDASELVRKLGADEVIDYTLGSVEEQLKSFKLFDFILDNVGGSTETWALNFLKKWSGATYVTLVTPFLLNMDQLGIADGMLQTGVTMGTKTLKHFWQGVHYRWAFFMASGPYLDEIAELVDAGKIRPVIEQTFPFSEVPEAFLKVERGHARGKTVVNVI
SIO_010081: Rtn4ip1
subclass of: SO_0000673
so part of: Rtn4ip1
location: complement(join(7201670..7201777,7212627..7212719,7216000..7216183,7222442..7222578,7228412..7228460,7235991..7236115,7236940..7237008,7238694..7238819))
location: region:7201670-7238819:-1
so has part: feature:7238694-7238819:-1:exon
so has part: feature:7236940-7237008:-1:exon
so has part: feature:7235991-7236115:-1:exon
so has part: feature:7228412-7228460:-1:exon
so has part: feature:7222442-7222578:-1:exon
so has part: feature:7216000-7216183:-1:exon
so has part: feature:7212627-7212719:-1:exon
so has part: feature:7201670-7201777:-1:exon

XP_036024684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7238694-7238819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7236940-7237008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7235991-7236115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7228412-7228460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7222442-7222578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7216000-7216183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7212627-7212719:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7201670-7201777:-1:exon

Qrsl1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Qrsl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7243836..7269624
location: region:7243836-7269624:1
so has part: feature:7243836-7269624:1:exon
subclass of: SO_0000010

118570372
type: Gene
SIO_000068: ncbigene

position:7243836:1
position: 7243836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7269624:1
position: 7269624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7243836-7269624:1:exon

Qrsl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Qrsl1
product: glutaminyl-tRNA amidotransferase subunit QRSL1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036168788.1
SIO_010081: Qrsl1
subclass of: SO_0000673
so part of: Qrsl1
location: join(7243836..7243988,7251818..7251977,7252736..7252834,7253962..7254058,7257989..7258156,7261376..7261551,7261632..7261744,7263821..7264013,7264700..7264817,7266795..7267000,7269119..7269624)
location: region:7243836-7269624:1
so has part: feature:7243836-7243988:1:exon
so has part: feature:7251818-7251977:1:exon
so has part: feature:7252736-7252834:1:exon
so has part: feature:7253962-7254058:1:exon
so has part: feature:7257989-7258156:1:exon
so has part: feature:7261376-7261551:1:exon
so has part: feature:7261632-7261744:1:exon
so has part: feature:7263821-7264013:1:exon
so has part: feature:7264700-7264817:1:exon
so has part: feature:7266795-7267000:1:exon
so has part: feature:7269119-7269624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7243836-7243988:1:exon

position:7243988:1
position: 7243988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7251818-7251977:1:exon

position:7251818:1
position: 7251818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7251977:1
position: 7251977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7252736-7252834:1:exon

position:7252736:1
position: 7252736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7252834:1
position: 7252834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7253962-7254058:1:exon

position:7253962:1
position: 7253962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7254058:1
position: 7254058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7257989-7258156:1:exon

position:7257989:1
position: 7257989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7258156:1
position: 7258156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7261376-7261551:1:exon

position:7261376:1
position: 7261376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7261551:1
position: 7261551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7261632-7261744:1:exon

position:7261632:1
position: 7261632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7261744:1
position: 7261744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7263821-7264013:1:exon

position:7263821:1
position: 7263821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7264013:1
position: 7264013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7264700-7264817:1:exon

position:7264700:1
position: 7264700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7264817:1
position: 7264817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7266795-7267000:1:exon

position:7266795:1
position: 7266795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7267000:1
position: 7267000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7269119-7269624:1:exon

position:7269119:1
position: 7269119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Qrsl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Qrsl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
translation: MLGRTLREVSAALKQGQVTPTELCKKCLSLIKKTKYLNAYITVSEEVALKQAEESEKRYKEGQSLGDLDGIPVAVKDNFSTSGIETTCASNMLKGYIPPYNATVVQKLLDHGALLMGKTNLDEFAMGSGSTDGVFGPVRNPWSYSRQYRERRQREEQEDSHWLITGGSSGGSAAAVAAFTCFAALGSDTGGSTRNPAAHCGLVGFKPSYGLVSRHGLIPLVNSMDVPGIFTRCVDDTAIVLGVLAGHDPKDSTTVQDPIKPSMIPSVMDVSRLCIGIPKEYLVPELSSEIRSLWSQAADLFESGGARVIEVSLPHTCYSIVCYHVLCTSEVASNMARFDGLQYGHRSGIDVSTEAMYAATRQEGFSDVVRGRILSGNFFLLKENYENYFIKAQKVRRLIMRDFMNVFDSGVDVLLTPTTLREAVPYLEFIKEDNRTRSAQDDIFTQAVNMAGLPAVSVPVALSNQGLPIGLQLIGRAFCDQQLLTVAKWFEKQVQFPVIQLQDLMDDGSLVVENGKLASVSVT
SIO_010081: Qrsl1
subclass of: SO_0000673
so part of: Qrsl1
location: join(7243965..7243988,7251818..7251977,7252736..7252834,7253962..7254058,7257989..7258156,7261376..7261551,7261632..7261744,7263821..7264013,7264700..7264817,7266795..7267000,7269119..7269336)
location: region:7243965-7269336:1
so has part: feature:7243965-7243988:1:exon
so has part: feature:7251818-7251977:1:exon
so has part: feature:7252736-7252834:1:exon
so has part: feature:7253962-7254058:1:exon
so has part: feature:7257989-7258156:1:exon
so has part: feature:7261376-7261551:1:exon
so has part: feature:7261632-7261744:1:exon
so has part: feature:7263821-7264013:1:exon
so has part: feature:7264700-7264817:1:exon
so has part: feature:7266795-7267000:1:exon
so has part: feature:7269119-7269336:1:exon

XP_036024681.1
type: Protein
SIO_000068: ncbiprotein

position:7243965:1
position: 7243965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7269336:1
position: 7269336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7243965-7243988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7251818-7251977:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7252736-7252834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7253962-7254058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7257989-7258156:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7261376-7261551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7261632-7261744:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7263821-7264013:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7264700-7264817:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7266795-7267000:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7269119-7269336:1:exon

Trnaa-agc
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Trnaa-agc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(7285783..7285854)
location: region:7285783-7285854:-1
so has part: feature:7285783-7285854:-1:exon
subclass of: SO_0000663

118570770
type: Gene
SIO_000068: ncbigene

position:7285783:-1
position: 7285783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7285854:-1
position: 7285854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7285783-7285854:-1:exon

Trnaa-agc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 38674
gene: Trnaa-agc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA alanine (anticodon AGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(7285820..7285822),aa:Ala, seq:agc)
SIO_010081: Trnaa-agc
subclass of: SO_0000673
so part of: Trnaa-agc
location: complement(7285783..7285854)
location: region:7285783-7285854:-1
so has part: feature:7285783-7285854:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7285783-7285854:-1:exon

Cd24
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Cd24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7547912..7553320)
location: region:7547912-7553320:-1
so has part: feature:7547912-7553320:-1:exon
subclass of: SO_0000010

118570422
type: Gene
SIO_000068: ncbigene

position:7547912:-1
position: 7547912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7553320:-1
position: 7553320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7547912-7553320:-1:exon

Cd24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Cd24
product: CD24 molecule, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_036168897.1
SIO_010081: Cd24
subclass of: SO_0000673
so part of: Cd24
location: complement(join(7547912..7549566,7552569..7552745,7553085..7553320))
location: region:7547912-7553320:-1
so has part: feature:7553085-7553320:-1:exon
so has part: feature:7552569-7552745:-1:exon
so has part: feature:7547912-7549566:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7553085-7553320:-1:exon

position:7553085:-1
position: 7553085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7552569-7552745:-1:exon

position:7552569:-1
position: 7552569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7552745:-1
position: 7552745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7547912-7549566:-1:exon

position:7549566:-1
position: 7549566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cd24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Cd24
product: CD24 molecule, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036168896.1
SIO_010081: Cd24
subclass of: SO_0000673
so part of: Cd24
location: complement(join(7547912..7549566,7552569..7552791))
location: region:7547912-7552791:-1
so has part: feature:7552569-7552791:-1:exon
so has part: feature:7547912-7549566:-1:exon

position:7552791:-1
position: 7552791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7552569-7552791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7547912-7549566:-1:exon

Cd24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Cd24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal transducer CD24
translation: MGRAMVARLGLGLLLLALLLPTQIYCNQTSVTPFSSNHTISTAPNPTNATTKAGGSALQSTVGLLAVSLSLLHLYC
SIO_010081: Cd24
subclass of: SO_0000673
so part of: Cd24
location: complement(join(7549405..7549566,7552569..7552637))
location: region:7549405-7552637:-1
so has part: feature:7552569-7552637:-1:exon
so has part: feature:7549405-7549566:-1:exon

XP_036024789.1
type: Protein
SIO_000068: ncbiprotein

position:7549405:-1
position: 7549405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7552637:-1
position: 7552637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7552569-7552637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7549405-7549566:-1:exon

Cd24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Cd24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal transducer CD24
translation: MGRAMVARLGLGLLLLALLLPTQIYCNQTSVTPFSSNHTISTAPNPTNATTKAGGSALQSTVGLLAVSLSLLHLYC
SIO_010081: Cd24
subclass of: SO_0000673
so part of: Cd24
location: complement(join(7549405..7549566,7552569..7552637))
location: region:7549405-7552637:-1
so has part: feature:7552569-7552637:-1:exon
so has part: feature:7549405-7549566:-1:exon

XP_036024790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7552569-7552637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7549405-7549566:-1:exon

Trnav-aac
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Trnav-aac
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 7585717..7585797
location: region:7585717-7585797:1
so has part: feature:7585717-7585797:1:exon
subclass of: SO_0000663

118570774
type: Gene
SIO_000068: ncbigene

position:7585717:1
position: 7585717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7585797:1
position: 7585797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7585717-7585797:1:exon

Trnav-aac
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 38674
gene: Trnav-aac
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:7585758..7585760,aa:Val,seq:aac)
SIO_010081: Trnav-aac
subclass of: SO_0000673
so part of: Trnav-aac
location: 7585717..7585797
location: region:7585717-7585797:1
so has part: feature:7585717-7585797:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7585717-7585797:1:exon

Mtres1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Mtres1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7590143..7605666
location: region:7590143-7605666:1
so has part: feature:7590143-7605666:1:exon
subclass of: SO_0000010

118570686
type: Gene
SIO_000068: ncbigene

position:7590143:1
position: 7590143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7605666:1
position: 7605666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7590143-7605666:1:exon

Mtres1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Mtres1
product: mitochondrial transcription rescue factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_036169348.1
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(7590143..7590213,7593455..7593528,7596414..7596898,7599381..7599453,7605169..7605666)
location: region:7590143-7605666:1
so has part: feature:7590143-7590213:1:exon
so has part: feature:7593455-7593528:1:exon
so has part: feature:7596414-7596898:1:exon
so has part: feature:7599381-7599453:1:exon
so has part: feature:7605169-7605666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7590143-7590213:1:exon

position:7590213:1
position: 7590213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7593455-7593528:1:exon

position:7593455:1
position: 7593455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7593528:1
position: 7593528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7596414-7596898:1:exon

position:7596414:1
position: 7596414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7596898:1
position: 7596898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7599381-7599453:1:exon

position:7599381:1
position: 7599381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7599453:1
position: 7599453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7605169-7605666:1:exon

position:7605169:1
position: 7605169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mtres1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Mtres1
product: mitochondrial transcription rescue factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_036169349.1
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(7590143..7590213,7593455..7593511,7596414..7596898,7599381..7599453,7605169..7605666)
location: region:7590143-7605666:1
so has part: feature:7590143-7590213:1:exon
so has part: feature:7593455-7593511:1:exon
so has part: feature:7596414-7596898:1:exon
so has part: feature:7599381-7599453:1:exon
so has part: feature:7605169-7605666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7590143-7590213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7593455-7593511:1:exon

position:7593511:1
position: 7593511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7596414-7596898:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7599381-7599453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7605169-7605666:1:exon

Mtres1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Mtres1
product: mitochondrial transcription rescue factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169347.1
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(7590143..7590213,7596414..7596898,7599381..7599453,7605169..7605666)
location: region:7590143-7605666:1
so has part: feature:7590143-7590213:1:exon
so has part: feature:7596414-7596898:1:exon
so has part: feature:7599381-7599453:1:exon
so has part: feature:7605169-7605666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7590143-7590213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7596414-7596898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7599381-7599453:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7605169-7605666:1:exon

Mtres1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Mtres1
product: mitochondrial transcription rescue factor 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_036169352.1
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(7590224..7590493,7596414..7596898,7599381..7599453,7605169..7605666)
location: region:7590224-7605666:1
so has part: feature:7590224-7590493:1:exon
so has part: feature:7596414-7596898:1:exon
so has part: feature:7599381-7599453:1:exon
so has part: feature:7605169-7605666:1:exon

position:7590224:1
position: 7590224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7590224-7590493:1:exon

position:7590493:1
position: 7590493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7596414-7596898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7599381-7599453:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7605169-7605666:1:exon

Mtres1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Mtres1
product: mitochondrial transcription rescue factor 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_036169351.1
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(7590224..7590452,7596414..7596898,7599381..7599453,7605169..7605666)
location: region:7590224-7605666:1
so has part: feature:7590224-7590452:1:exon
so has part: feature:7596414-7596898:1:exon
so has part: feature:7599381-7599453:1:exon
so has part: feature:7605169-7605666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7590224-7590452:1:exon

position:7590452:1
position: 7590452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7596414-7596898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7599381-7599453:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7605169-7605666:1:exon

Mtres1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Mtres1
product: mitochondrial transcription rescue factor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_036169350.1
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(7590512..7591181,7596414..7596898,7599381..7599453,7605169..7605666)
location: region:7590512-7605666:1
so has part: feature:7590512-7591181:1:exon
so has part: feature:7596414-7596898:1:exon
so has part: feature:7599381-7599453:1:exon
so has part: feature:7605169-7605666:1:exon

position:7590512:1
position: 7590512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7590512-7591181:1:exon

position:7591181:1
position: 7591181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7596414-7596898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7599381-7599453:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7605169-7605666:1:exon

Mtres1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Mtres1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial transcription rescue factor 1
translation: MAVTGVRLLTGALRKPDAWTRFWGVLQGTSSHKLCASWNRYLYFSSTKLNTSNYKTLFRTIFPLWFPGLSVSPKCICPFSVRLKSNISSKKSTKKTLQKDADEEDSDEEIHHHPERSEQEEELEDDPSVVKDYKDLEKVVQSFRYDVVLKTGLDIGRNKVEDAFYKGELRLNGEKLWKKSRTVKVGDTLDLLVGENKETGTEVVMRVLLKSIFEEKTESDKHRVLLRRWKNLKLPKKTAAAAAAK
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(7596426..7596898,7599381..7599453,7605169..7605360)
location: region:7596426-7605360:1
so has part: feature:7596426-7596898:1:exon
so has part: feature:7599381-7599453:1:exon
so has part: feature:7605169-7605360:1:exon

XP_036025240.1
type: Protein
SIO_000068: ncbiprotein

position:7596426:1
position: 7596426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7605360:1
position: 7605360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7596426-7596898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7599381-7599453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7605169-7605360:1:exon

Mtres1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Mtres1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial transcription rescue factor 1
translation: MAVTGVRLLTGALRKPDAWTRFWGVLQGTSSHKLCASWNRYLYFSSTKLNTSNYKTLFRTIFPLWFPGLSVSPKCICPFSVRLKSNISSKKSTKKTLQKDADEEDSDEEIHHHPERSEQEEELEDDPSVVKDYKDLEKVVQSFRYDVVLKTGLDIGRNKVEDAFYKGELRLNGEKLWKKSRTVKVGDTLDLLVGENKETGTEVVMRVLLKSIFEEKTESDKHRVLLRRWKNLKLPKKTAAAAAAK
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(7596426..7596898,7599381..7599453,7605169..7605360)
location: region:7596426-7605360:1
so has part: feature:7596426-7596898:1:exon
so has part: feature:7599381-7599453:1:exon
so has part: feature:7605169-7605360:1:exon

XP_036025241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7596426-7596898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7599381-7599453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7605169-7605360:1:exon

Mtres1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Mtres1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial transcription rescue factor 1
translation: MAVTGVRLLTGALRKPDAWTRFWGVLQGTSSHKLCASWNRYLYFSSTKLNTSNYKTLFRTIFPLWFPGLSVSPKCICPFSVRLKSNISSKKSTKKTLQKDADEEDSDEEIHHHPERSEQEEELEDDPSVVKDYKDLEKVVQSFRYDVVLKTGLDIGRNKVEDAFYKGELRLNGEKLWKKSRTVKVGDTLDLLVGENKETGTEVVMRVLLKSIFEEKTESDKHRVLLRRWKNLKLPKKTAAAAAAK
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(7596426..7596898,7599381..7599453,7605169..7605360)
location: region:7596426-7605360:1
so has part: feature:7596426-7596898:1:exon
so has part: feature:7599381-7599453:1:exon
so has part: feature:7605169-7605360:1:exon

XP_036025242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7596426-7596898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7599381-7599453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7605169-7605360:1:exon

Mtres1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Mtres1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial transcription rescue factor 1
translation: MAVTGVRLLTGALRKPDAWTRFWGVLQGTSSHKLCASWNRYLYFSSTKLNTSNYKTLFRTIFPLWFPGLSVSPKCICPFSVRLKSNISSKKSTKKTLQKDADEEDSDEEIHHHPERSEQEEELEDDPSVVKDYKDLEKVVQSFRYDVVLKTGLDIGRNKVEDAFYKGELRLNGEKLWKKSRTVKVGDTLDLLVGENKETGTEVVMRVLLKSIFEEKTESDKHRVLLRRWKNLKLPKKTAAAAAAK
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(7596426..7596898,7599381..7599453,7605169..7605360)
location: region:7596426-7605360:1
so has part: feature:7596426-7596898:1:exon
so has part: feature:7599381-7599453:1:exon
so has part: feature:7605169-7605360:1:exon

XP_036025243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7596426-7596898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7599381-7599453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7605169-7605360:1:exon

Mtres1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Mtres1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial transcription rescue factor 1
translation: MAVTGVRLLTGALRKPDAWTRFWGVLQGTSSHKLCASWNRYLYFSSTKLNTSNYKTLFRTIFPLWFPGLSVSPKCICPFSVRLKSNISSKKSTKKTLQKDADEEDSDEEIHHHPERSEQEEELEDDPSVVKDYKDLEKVVQSFRYDVVLKTGLDIGRNKVEDAFYKGELRLNGEKLWKKSRTVKVGDTLDLLVGENKETGTEVVMRVLLKSIFEEKTESDKHRVLLRRWKNLKLPKKTAAAAAAK
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(7596426..7596898,7599381..7599453,7605169..7605360)
location: region:7596426-7605360:1
so has part: feature:7596426-7596898:1:exon
so has part: feature:7599381-7599453:1:exon
so has part: feature:7605169-7605360:1:exon

XP_036025244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7596426-7596898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7599381-7599453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7605169-7605360:1:exon

Mtres1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Mtres1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial transcription rescue factor 1
translation: MAVTGVRLLTGALRKPDAWTRFWGVLQGTSSHKLCASWNRYLYFSSTKLNTSNYKTLFRTIFPLWFPGLSVSPKCICPFSVRLKSNISSKKSTKKTLQKDADEEDSDEEIHHHPERSEQEEELEDDPSVVKDYKDLEKVVQSFRYDVVLKTGLDIGRNKVEDAFYKGELRLNGEKLWKKSRTVKVGDTLDLLVGENKETGTEVVMRVLLKSIFEEKTESDKHRVLLRRWKNLKLPKKTAAAAAAK
SIO_010081: Mtres1
subclass of: SO_0000673
so part of: Mtres1
location: join(7596426..7596898,7599381..7599453,7605169..7605360)
location: region:7596426-7605360:1
so has part: feature:7596426-7596898:1:exon
so has part: feature:7599381-7599453:1:exon
so has part: feature:7605169-7605360:1:exon

XP_036025245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7596426-7596898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7599381-7599453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7605169-7605360:1:exon

Bend3
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Bend3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7615409..7650019)
location: region:7615409-7650019:-1
so has part: feature:7615409-7650019:-1:exon
subclass of: SO_0000010

118570472
type: Gene
SIO_000068: ncbigene

position:7615409:-1
position: 7615409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7650019:-1
position: 7650019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7615409-7650019:-1:exon

Bend3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Bend3
product: BEN domain containing 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_036168992.1
SIO_010081: Bend3
subclass of: SO_0000673
so part of: Bend3
location: complement(join(7615409..7618145,7634298..7634494,7634967..7635011,7649812..7650019))
location: region:7615409-7650019:-1
so has part: feature:7649812-7650019:-1:exon
so has part: feature:7634967-7635011:-1:exon
so has part: feature:7634298-7634494:-1:exon
so has part: feature:7615409-7618145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7649812-7650019:-1:exon

position:7649812:-1
position: 7649812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7634967-7635011:-1:exon

position:7634967:-1
position: 7634967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7635011:-1
position: 7635011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7634298-7634494:-1:exon

position:7634298:-1
position: 7634298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7634494:-1
position: 7634494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7615409-7618145:-1:exon

position:7618145:-1
position: 7618145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Bend3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Bend3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: BEN domain-containing protein 3
translation: MNSTEFGEDVEVVRNDAVKVEGDDAAPDCSRNSRASEKHPLGSVLTALQESSKRKHLGSDGQPDSVSSVKRRRLIPEALLAGMRNRENSSPCQGNGEPAGRGRGCVWPAEEEPSGEATTPSYKKPLYGISHKIMEKKNPPSADLLSPYELIEKANSSNSPSPLRLLNESQKRECGAGVASDGDPNIYFLIQKMFYMLNTLTSNMSQLHSKVDLLSLEVSRIKKQVSPSELVAKFQPPPEYQLTPAELKQTVEQSLSCGDLACRLLVQLFPELFSDVDFSPGCSTCGFAAKRKLESLHLQLIRNYVEVYYPSVKDTAVWQAECLPQLNDFFSRFWAQREMEDSQPGGQVASFFEADQVDAGHFLDNKDQEEALSLDRSSTIASDHVVDTQDLTEFLDEASSPGEFAVFLLHRLFPELFDHRKLGEQYSCYGDGGKQELDPQRLQIIRNYTEIYFPDMQEEEAWLQQCAQRINDELEGLGLEGGSEGEAPRDDCYDSSSLPDDISVVKVEDNFEGERPGRRSKKIWLVPIDFDKLEIPQPDFEMPGSECLLSKEQLRSIYESSLSIGNFASRLLVHLFPELFTHENLRKQYNCSGSLGKKQLDPARIRLIRHYVQLLYPRAKNDRVWTLEFVGKLDERCRRRDTEQRRSYQQQRKVHVPGPECRDLASYAINPERFREEFEGPPLPPERSSKDFCKIPLDELVVPSPDFPVPSPYLLSDKEVREIVQQSLSVGNFAARLLVRLFPELFTAENLRLQYNHSGACNKKQLDPTRLRLIRHYVEAVYPVEKMEEVWHYECIPSIDERCRRPNRKKCDILKKAKKVEK
SIO_010081: Bend3
subclass of: SO_0000673
so part of: Bend3
location: complement(join(7615907..7618145,7634298..7634494,7634967..7635000))
location: region:7615907-7635000:-1
so has part: feature:7634967-7635000:-1:exon
so has part: feature:7634298-7634494:-1:exon
so has part: feature:7615907-7618145:-1:exon

XP_036024885.1
type: Protein
SIO_000068: ncbiprotein

position:7615907:-1
position: 7615907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7635000:-1
position: 7635000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7634967-7635000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7634298-7634494:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7615907-7618145:-1:exon

Pdss2
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Pdss2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7701456..7932666)
location: region:7701456-7932666:-1
so has part: feature:7701456-7932666:-1:exon
subclass of: SO_0000010

118570432
type: Gene
SIO_000068: ncbigene

position:7701456:-1
position: 7701456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7932666:-1
position: 7932666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7701456-7932666:-1:exon

Pdss2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Pdss2
product: decaprenyl diphosphate synthase subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_036168915.1
SIO_010081: Pdss2
subclass of: SO_0000673
so part of: Pdss2
location: complement(join(7701456..7702270,7741342..7741374,7760805..7760936,7762081..7762254,7789348..7789422,7814191..7814389,7864544..7864672,7932111..7932666))
location: region:7701456-7932666:-1
so has part: feature:7932111-7932666:-1:exon
so has part: feature:7864544-7864672:-1:exon
so has part: feature:7814191-7814389:-1:exon
so has part: feature:7789348-7789422:-1:exon
so has part: feature:7762081-7762254:-1:exon
so has part: feature:7760805-7760936:-1:exon
so has part: feature:7741342-7741374:-1:exon
so has part: feature:7701456-7702270:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7932111-7932666:-1:exon

position:7932111:-1
position: 7932111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7864544-7864672:-1:exon

position:7864544:-1
position: 7864544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7864672:-1
position: 7864672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7814191-7814389:-1:exon

position:7814191:-1
position: 7814191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7814389:-1
position: 7814389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7789348-7789422:-1:exon

position:7789348:-1
position: 7789348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7789422:-1
position: 7789422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7762081-7762254:-1:exon

position:7762081:-1
position: 7762081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7762254:-1
position: 7762254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7760805-7760936:-1:exon

position:7760805:-1
position: 7760805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7760936:-1
position: 7760936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7741342-7741374:-1:exon

position:7741342:-1
position: 7741342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7741374:-1
position: 7741374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7701456-7702270:-1:exon

position:7702270:-1
position: 7702270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pdss2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Pdss2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: decaprenyl-diphosphate synthase subunit 2
translation: MSLRQLLLRLSGYHGASGPPHRQWWCSRSLDTISSVGSWRGRSSRSPAHWNQVVSEAEKIVGYPASFMSLRCLLSDELSNIAMQLRKLVGTQHPLLTTARGLVHDSRHNLQLRGLVVLLISKAAGPSAENCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMKFGNKIAILSGDFLLANACNGLALLQNTKVVELLTSALKDLVHGAYQENSASAKGHSITENIGMSTWKEQTFLSHCALLAKSCQAAMELAKHDAEVQDMAFQYGKHMAMSHKISSDLQPFIKDKTSDSTTFHLNSAPVVLHQEFLGRELWIKQIGEAQEKGRLNYTKLRETIKAGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIVFAVTRFS
SIO_010081: Pdss2
subclass of: SO_0000673
so part of: Pdss2
location: complement(join(7702112..7702270,7741342..7741374,7760805..7760936,7762081..7762254,7789348..7789422,7814191..7814389,7864544..7864672,7932111..7932409))
location: region:7702112-7932409:-1
so has part: feature:7932111-7932409:-1:exon
so has part: feature:7864544-7864672:-1:exon
so has part: feature:7814191-7814389:-1:exon
so has part: feature:7789348-7789422:-1:exon
so has part: feature:7762081-7762254:-1:exon
so has part: feature:7760805-7760936:-1:exon
so has part: feature:7741342-7741374:-1:exon
so has part: feature:7702112-7702270:-1:exon

XP_036024808.1
type: Protein
SIO_000068: ncbiprotein

position:7702112:-1
position: 7702112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7932409:-1
position: 7932409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7932111-7932409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7864544-7864672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7814191-7814389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7789348-7789422:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7762081-7762254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7760805-7760936:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7741342-7741374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7702112-7702270:-1:exon

LOC118570729
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570729
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(7756654..7756805)
location: region:7756654-7756805:-1
so has part: feature:7756654-7756805:-1:exon

118570729
type: Gene
SIO_000068: ncbigene

position:7756654:-1
position: 7756654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7756805:-1
position: 7756805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7756654-7756805:-1:exon

LOC118570729
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570729
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118570729
subclass of: SO_0000673
so part of: LOC118570729
location: complement(7756654..7756805)
location: region:7756654-7756805:-1
so has part: feature:7756654-7756805:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7756654-7756805:-1:exon

LOC118570222
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7978580..8143363
location: region:7978580-8143363:1
so has part: feature:7978580-8143363:1:exon
subclass of: SO_0000010

118570222
type: Gene
SIO_000068: ncbigene

position:7978580:1
position: 7978580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8143363:1
position: 8143363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7978580-8143363:1:exon

LOC118570222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118570222
product: sine oculis binding protein homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_036168577.1
SIO_010081: LOC118570222
subclass of: SO_0000673
so part of: LOC118570222
location: join(7978580..7979744,7993129..7993267,7995892..7996077,8025299..8025450,8123023..8124951,8141625..8142908)
location: region:7978580-8142908:1
so has part: feature:7978580-7979744:1:exon
so has part: feature:7993129-7993267:1:exon
so has part: feature:7995892-7996077:1:exon
so has part: feature:8025299-8025450:1:exon
so has part: feature:8123023-8124951:1:exon
so has part: feature:8141625-8142908:1:exon

position:8142908:1
position: 8142908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7978580-7979744:1:exon

position:7979744:1
position: 7979744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7993129-7993267:1:exon

position:7993129:1
position: 7993129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7993267:1
position: 7993267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7995892-7996077:1:exon

position:7995892:1
position: 7995892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7996077:1
position: 7996077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8025299-8025450:1:exon

position:8025299:1
position: 8025299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8025450:1
position: 8025450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8123023-8124951:1:exon

position:8123023:1
position: 8123023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8124951:1
position: 8124951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8141625-8142908:1:exon

position:8141625:1
position: 8141625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118570222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118570222
product: sine oculis binding protein homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036168576.1
SIO_010081: LOC118570222
subclass of: SO_0000673
so part of: LOC118570222
location: join(7978581..7979744,7993129..7993267,7995892..7996077,8025299..8025450,8076554..8076649,8123023..8124951,8141625..8143363)
location: region:7978581-8143363:1
so has part: feature:7978581-7979744:1:exon
so has part: feature:7993129-7993267:1:exon
so has part: feature:7995892-7996077:1:exon
so has part: feature:8025299-8025450:1:exon
so has part: feature:8076554-8076649:1:exon
so has part: feature:8123023-8124951:1:exon
so has part: feature:8141625-8143363:1:exon

position:7978581:1
position: 7978581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7978581-7979744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7993129-7993267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7995892-7996077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8025299-8025450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8076554-8076649:1:exon

position:8076554:1
position: 8076554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8076649:1
position: 8076649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8123023-8124951:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8141625-8143363:1:exon

LOC118570222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118570222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sine oculis-binding protein homolog isoform X1
translation: MAEMEKEGRPPENKRSRKPAHPVKREINEEMKNFAENTMNELLGWYGYDKVELKDGEDIEFRSYPTDGESRQHISVLKENSLPKPKLPEDSVISSYNISTGYSGLATGNGLSESPAGSKDHGNVPIIVPLIPPPFIKPSAEDDVSNVQIMCAWCQKVGIKRYSLSMGSEVKSFCSEKCFAACRRAYFKRNKARDEDGRAETFPQQHYAKETPRLAFKNNCELLVCDWCKHIRHTKEYLDFGDGERRLQFCSAKCLNQYKMDIFYKETQANLPAGLCSTLHPHMESKAEGTGVQLLTPDSWNIPLTDARRKAPSPVAAAGQSQGPGPSSSTTVSPSDTANCSVTKIPTPVPKSLPISETPSIPPVSVQPPASIGPPLGVPPRSPPMVMTNRGPVPLPIFMEQQIIQQIRPPFIRGPPHHASNPNSPLSNPMLPGIGPPPGGPRNLGPTSSPMHRPMLSPHIHPPSTPTMPGNPPGLLPPPPPGAPLPSLPFPPVSMMPNGPMPVPQMMNFGLPSLAPLVPPPTLLVPYPVIVPLPVPIPIPIPIPHVNDSKPPNGFSSNGESFVPNAPGDSAAAGGKSGGRSLSPRDSKQGSSKSADSPAGSSGQALSLAPAERGRGEVVDLTRRAGSPVGAGVQPSFAGVLHGPQDGVIDLTVGHRARLHNVIHRALHAHVKAEREPGATERRTCGGCRDGHCSPPAAGDPGPGAPAGPEAAAACNVIVNGTRGAPAEAKGAEPPPEQPPPPAPPKKLLSPEEPAVNELESVKENNCTSSCHLDGEATKKLMGEEALAGGDKSDPNLNNPADEDHAYALRMLPKTGCVIQPVPKPTEKAAMAPCVISSPMLSAGPEDLEPPLKRRCLRIRNQNK
SIO_010081: LOC118570222
subclass of: SO_0000673
so part of: LOC118570222
location: join(7979649..7979744,7993129..7993267,7995892..7996077,8025299..8025450,8076554..8076649,8123023..8124948)
location: region:7979649-8124948:1
so has part: feature:7979649-7979744:1:exon
so has part: feature:7993129-7993267:1:exon
so has part: feature:7995892-7996077:1:exon
so has part: feature:8025299-8025450:1:exon
so has part: feature:8076554-8076649:1:exon
so has part: feature:8123023-8124948:1:exon

XP_036024469.1
type: Protein
SIO_000068: ncbiprotein

position:7979649:1
position: 7979649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8124948:1
position: 8124948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7979649-7979744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7993129-7993267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7995892-7996077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8025299-8025450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8076554-8076649:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8123023-8124948:1:exon

LOC118570222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118570222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sine oculis-binding protein homolog isoform X2
translation: MAEMEKEGRPPENKRSRKPAHPVKREINEEMKNFAENTMNELLGWYGYDKVELKDGEDIEFRSYPTDGESRQHISVLKENSLPKPKLPEDSVISSYNISTGYSGLATGNGLSESPAGSKDHGNVPIIVPLIPPPFIKPSAEDDVSNVQIMCAWCQKVGIKRYSLSMGSEVKSFCSEKCFAACRRAYFKRNKVCDWCKHIRHTKEYLDFGDGERRLQFCSAKCLNQYKMDIFYKETQANLPAGLCSTLHPHMESKAEGTGVQLLTPDSWNIPLTDARRKAPSPVAAAGQSQGPGPSSSTTVSPSDTANCSVTKIPTPVPKSLPISETPSIPPVSVQPPASIGPPLGVPPRSPPMVMTNRGPVPLPIFMEQQIIQQIRPPFIRGPPHHASNPNSPLSNPMLPGIGPPPGGPRNLGPTSSPMHRPMLSPHIHPPSTPTMPGNPPGLLPPPPPGAPLPSLPFPPVSMMPNGPMPVPQMMNFGLPSLAPLVPPPTLLVPYPVIVPLPVPIPIPIPIPHVNDSKPPNGFSSNGESFVPNAPGDSAAAGGKSGGRSLSPRDSKQGSSKSADSPAGSSGQALSLAPAERGRGEVVDLTRRAGSPVGAGVQPSFAGVLHGPQDGVIDLTVGHRARLHNVIHRALHAHVKAEREPGATERRTCGGCRDGHCSPPAAGDPGPGAPAGPEAAAACNVIVNGTRGAPAEAKGAEPPPEQPPPPAPPKKLLSPEEPAVNELESVKENNCTSSCHLDGEATKKLMGEEALAGGDKSDPNLNNPADEDHAYALRMLPKTGCVIQPVPKPTEKAAMAPCVISSPMLSAGPEDLEPPLKRRCLRIRNQNK
SIO_010081: LOC118570222
subclass of: SO_0000673
so part of: LOC118570222
location: join(7979649..7979744,7993129..7993267,7995892..7996077,8025299..8025450,8123023..8124948)
location: region:7979649-8124948:1
so has part: feature:7979649-7979744:1:exon
so has part: feature:7993129-7993267:1:exon
so has part: feature:7995892-7996077:1:exon
so has part: feature:8025299-8025450:1:exon
so has part: feature:8123023-8124948:1:exon

XP_036024470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7979649-7979744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7993129-7993267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7995892-7996077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8025299-8025450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8123023-8124948:1:exon

Scml4
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Scml4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8189477..8304642)
location: region:8189477-8304642:-1
so has part: feature:8189477-8304642:-1:exon
subclass of: SO_0000010

118570468
type: Gene
SIO_000068: ncbigene

position:8189477:-1
position: 8189477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8304642:-1
position: 8304642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8189477-8304642:-1:exon

Scml4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Scml4
product: Scm polycomb group protein like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036168981.1
SIO_010081: Scml4
subclass of: SO_0000673
so part of: Scml4
location: complement(join(8189477..8192120,8193741..8193886,8203191..8203475,8217427..8217621,8220988..8221188,8225173..8225302,8244080..8244292,8304561..8304642))
location: region:8189477-8304642:-1
so has part: feature:8304561-8304642:-1:exon
so has part: feature:8244080-8244292:-1:exon
so has part: feature:8225173-8225302:-1:exon
so has part: feature:8220988-8221188:-1:exon
so has part: feature:8217427-8217621:-1:exon
so has part: feature:8203191-8203475:-1:exon
so has part: feature:8193741-8193886:-1:exon
so has part: feature:8189477-8192120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8304561-8304642:-1:exon

position:8304561:-1
position: 8304561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8244080-8244292:-1:exon

position:8244080:-1
position: 8244080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8244292:-1
position: 8244292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8225173-8225302:-1:exon

position:8225173:-1
position: 8225173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8225302:-1
position: 8225302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8220988-8221188:-1:exon

position:8220988:-1
position: 8220988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8221188:-1
position: 8221188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8217427-8217621:-1:exon

position:8217427:-1
position: 8217427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8217621:-1
position: 8217621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8203191-8203475:-1:exon

position:8203191:-1
position: 8203191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8203475:-1
position: 8203475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8193741-8193886:-1:exon

position:8193741:-1
position: 8193741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8193886:-1
position: 8193886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8189477-8192120:-1:exon

position:8192120:-1
position: 8192120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Scml4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Scml4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sex comb on midleg-like protein 4
translation: MALSSPCGLPPHSVRLAPAEMQTQKVPGRKRGRPPLHSTPVPMAVHNLYSASAGSGPAVTIPKKRGRKPRYKIKPPVLMTPLALSPPRSTPEPDLSSIPQDAATIPSLVVPQALTVCLYVNKQADSGPYLERRKLQQLPERLGPERPAAVLQQAVQACIDCAHQPRLVFSLVKQGYRGELVSVSASFDGKQHLRSLPVVNSVGYVLRFLTKLCRSLLCDNLFSHLPYPGSLSASEKTQEREDGRTESAQAATAEECLANPAGMNRYSMDTSSAAFGHRGPLTHSSSQYYKRLNSGDSHLGGGPPATTSGSRSNPVPLGGPSTPGLRFPASSPKRSDVEGDRCASSPSPEVPDMRRLSSRNPSTWTVEDVVRFVKDADPQALGPHVELFRKHEIDGNALLLLRSDMIMKYLGLKLGPALKLCYHIDKLKQAKF
SIO_010081: Scml4
subclass of: SO_0000673
so part of: Scml4
location: complement(join(8191995..8192120,8193741..8193886,8203191..8203475,8217427..8217621,8220988..8221188,8225173..8225302,8244080..8244292,8304561..8304563))
location: region:8191995-8304563:-1
so has part: feature:8304561-8304563:-1:exon
so has part: feature:8244080-8244292:-1:exon
so has part: feature:8225173-8225302:-1:exon
so has part: feature:8220988-8221188:-1:exon
so has part: feature:8217427-8217621:-1:exon
so has part: feature:8203191-8203475:-1:exon
so has part: feature:8193741-8193886:-1:exon
so has part: feature:8191995-8192120:-1:exon

XP_036024874.1
type: Protein
SIO_000068: ncbiprotein

position:8191995:-1
position: 8191995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8304563:-1
position: 8304563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8304561-8304563:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8244080-8244292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8225173-8225302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8220988-8221188:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8217427-8217621:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8203191-8203475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8193741-8193886:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8191995-8192120:-1:exon

Sec63
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Sec63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8341204..8418986)
location: region:8341204-8418986:-1
so has part: feature:8341204-8418986:-1:exon
subclass of: SO_0000010

118570406
type: Gene
SIO_000068: ncbigene

position:8341204:-1
position: 8341204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8418986:-1
position: 8418986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8341204-8418986:-1:exon

Sec63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Sec63
product: SEC63 homolog, protein translocation regulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036168868.1
SIO_010081: Sec63
subclass of: SO_0000673
so part of: Sec63
location: complement(join(8341204..8345002,8346103..8346207,8349771..8349869,8353668..8353769,8355498..8355656,8359568..8359741,8359868..8359927,8362478..8362560,8367940..8368087,8369230..8369384,8370483..8370575,8373190..8373322,8373418..8373512,8376274..8376382,8377875..8377925,8379626..8379684,8381358..8381419,8384306..8384418,8385951..8386065,8391903..8392002,8418740..8418986))
location: region:8341204-8418986:-1
so has part: feature:8418740-8418986:-1:exon
so has part: feature:8391903-8392002:-1:exon
so has part: feature:8385951-8386065:-1:exon
so has part: feature:8384306-8384418:-1:exon
so has part: feature:8381358-8381419:-1:exon
so has part: feature:8379626-8379684:-1:exon
so has part: feature:8377875-8377925:-1:exon
so has part: feature:8376274-8376382:-1:exon
so has part: feature:8373418-8373512:-1:exon
so has part: feature:8373190-8373322:-1:exon
so has part: feature:8370483-8370575:-1:exon
so has part: feature:8369230-8369384:-1:exon
so has part: feature:8367940-8368087:-1:exon
so has part: feature:8362478-8362560:-1:exon
so has part: feature:8359868-8359927:-1:exon
so has part: feature:8359568-8359741:-1:exon
so has part: feature:8355498-8355656:-1:exon
so has part: feature:8353668-8353769:-1:exon
so has part: feature:8349771-8349869:-1:exon
so has part: feature:8346103-8346207:-1:exon
so has part: feature:8341204-8345002:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8418740-8418986:-1:exon

position:8418740:-1
position: 8418740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8391903-8392002:-1:exon

position:8391903:-1
position: 8391903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8392002:-1
position: 8392002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8385951-8386065:-1:exon

position:8385951:-1
position: 8385951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8386065:-1
position: 8386065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8384306-8384418:-1:exon

position:8384306:-1
position: 8384306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8384418:-1
position: 8384418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8381358-8381419:-1:exon

position:8381358:-1
position: 8381358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8381419:-1
position: 8381419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8379626-8379684:-1:exon

position:8379626:-1
position: 8379626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8379684:-1
position: 8379684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8377875-8377925:-1:exon

position:8377875:-1
position: 8377875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8377925:-1
position: 8377925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8376274-8376382:-1:exon

position:8376274:-1
position: 8376274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8376382:-1
position: 8376382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8373418-8373512:-1:exon

position:8373418:-1
position: 8373418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8373512:-1
position: 8373512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8373190-8373322:-1:exon

position:8373190:-1
position: 8373190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8373322:-1
position: 8373322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8370483-8370575:-1:exon

position:8370483:-1
position: 8370483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8370575:-1
position: 8370575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8369230-8369384:-1:exon

position:8369230:-1
position: 8369230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8369384:-1
position: 8369384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8367940-8368087:-1:exon

position:8367940:-1
position: 8367940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8368087:-1
position: 8368087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8362478-8362560:-1:exon

position:8362478:-1
position: 8362478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8362560:-1
position: 8362560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8359868-8359927:-1:exon

position:8359868:-1
position: 8359868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8359927:-1
position: 8359927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8359568-8359741:-1:exon

position:8359568:-1
position: 8359568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8359741:-1
position: 8359741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8355498-8355656:-1:exon

position:8355498:-1
position: 8355498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8355656:-1
position: 8355656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8353668-8353769:-1:exon

position:8353668:-1
position: 8353668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8353769:-1
position: 8353769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8349771-8349869:-1:exon

position:8349771:-1
position: 8349771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8349869:-1
position: 8349869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8346103-8346207:-1:exon

position:8346103:-1
position: 8346103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8346207:-1
position: 8346207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:8341204-8345002:-1:exon

position:8345002:-1
position: 8345002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sec63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Sec63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocation protein SEC63 homolog
translation: MAGQQFQYDDSGNTFFYFLTSFVGLIVIPATYYLWPRDQNAEQIRLKNIRKVYGRCMWYRLRLLKPQPNIIPTVKKTVLLAGWALFLFLAYKVSKTDREYQEYNPYEVLNLDPGATVAEIKKQYRLLSLKYHPDKGGDEVMFMRIAKAYAALTDEESRKNWEEFGNPDGPQATSFGIALPAWIVDQKNSILVLLVYGLAFMVILPVVVGSWWYRSIRYSGDQILIRTTQIYTYFVYKTRNMDMKRLIMVLAGASEFDPQYNKDATSRPTDNILIPQLIREIGSINLKKNEPPLTCPYSLKARVLLLSHLARMKIPETLEEDQQFMLKKCPALLQEMVNVICQLIIMARSREEREFRAPTLASLENCMKLSQMAVQGLQQFKSPLLQLPHIEEDNLRRVSNHKKYKIKTIQDLVSLKESDRHSLLHFLEDDKYEEVMAVLGSFPYVTMDIKSQVLDDEDSNNITVGSLVTVLVTLTRQTMAEVFEKEQSICAAEEQPTEDGQSDASKNKAKGGWQQKSKGPKKMPKSKKKKPLKKKPTALPFPQTKQQKQKQANGVVGSETAVKEEEDDISDKGSDSEEEETNRDSQSEKEDGSDRESDREQDEKQNKDDEAEWQELQQSIQRKERALLETKSKITHPVYSLYFPEEKQEWWWLYIADRKEQTLISMPYHVCTLKDTEEVELKFPAPGKPGNYQYTVFLRSDSYMGLDQIKPLKLEVHEAKPVPENHPQWDTAIEGDEDQEDSEGFEDSFEEEEEEEEGDN
SIO_010081: Sec63
subclass of: SO_0000673
so part of: Sec63
location: complement(join(8344859..8345002,8346103..8346207,8349771..8349869,8353668..8353769,8355498..8355656,8359568..8359741,8359868..8359927,8362478..8362560,8367940..8368087,8369230..8369384,8370483..8370575,8373190..8373322,8373418..8373512,8376274..8376382,8377875..8377925,8379626..8379684,8381358..8381419,8384306..8384418,8385951..8386065,8391903..8392002,8418740..8418863))
location: region:8344859-8418863:-1
so has part: feature:8418740-8418863:-1:exon
so has part: feature:8391903-8392002:-1:exon
so has part: feature:8385951-8386065:-1:exon
so has part: feature:8384306-8384418:-1:exon
so has part: feature:8381358-8381419:-1:exon
so has part: feature:8379626-8379684:-1:exon
so has part: feature:8377875-8377925:-1:exon
so has part: feature:8376274-8376382:-1:exon
so has part: feature:8373418-8373512:-1:exon
so has part: feature:8373190-8373322:-1:exon
so has part: feature:8370483-8370575:-1:exon
so has part: feature:8369230-8369384:-1:exon
so has part: feature:8367940-8368087:-1:exon
so has part: feature:8362478-8362560:-1:exon
so has part: feature:8359868-8359927:-1:exon
so has part: feature:8359568-8359741:-1:exon
so has part: feature:8355498-8355656:-1:exon
so has part: feature:8353668-8353769:-1:exon
so has part: feature:8349771-8349869:-1:exon
so has part: feature:8346103-8346207:-1:exon
so has part: feature:8344859-8345002:-1:exon

XP_036024761.1
type: Protein
SIO_000068: ncbiprotein

position:8344859:-1
position: 8344859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8418863:-1
position: 8418863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8418740-8418863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8391903-8392002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8385951-8386065:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8384306-8384418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8381358-8381419:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8379626-8379684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8377875-8377925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8376274-8376382:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8373418-8373512:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8373190-8373322:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8370483-8370575:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8369230-8369384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8367940-8368087:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8362478-8362560:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8359868-8359927:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8359568-8359741:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8355498-8355656:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8353668-8353769:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8349771-8349869:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8346103-8346207:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8344859-8345002:-1:exon

LOC118570750
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570750
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 8362993..8363094
location: region:8362993-8363094:1
so has part: feature:8362993-8363094:1:exon
subclass of: SO_0000623

118570750
type: Gene
SIO_000068: ncbigene

position:8362993:1
position: 8362993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8363094:1
position: 8363094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8362993-8363094:1:exon

LOC118570750
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: snRNA
gene: LOC118570750
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004943242.1
SIO_010081: LOC118570750
subclass of: SO_0000673
so part of: LOC118570750
location: 8362993..8363094
location: region:8362993-8363094:1
so has part: feature:8362993-8363094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8362993-8363094:1:exon

LOC118570634
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8402908..8411935
location: region:8402908-8411935:1
so has part: feature:8402908-8411935:1:exon

118570634
type: Gene
SIO_000068: ncbigene

position:8402908:1
position: 8402908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8411935:1
position: 8411935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8402908-8411935:1:exon

LOC118570634
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570634
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC118570634
subclass of: SO_0000673
so part of: LOC118570634
location: 8402908..8403136
location: region:8402908-8403136:1
so has part: feature:8402908-8403136:1:exon

position:8403136:1
position: 8403136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8402908-8403136:1:exon

LOC118570634
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570634
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC118570634
subclass of: SO_0000673
so part of: LOC118570634
location: 8403287..8403431
location: region:8403287-8403431:1
so has part: feature:8403287-8403431:1:exon

position:8403287:1
position: 8403287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8403431:1
position: 8403431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8403287-8403431:1:exon

LOC118570634
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570634
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC118570634
subclass of: SO_0000673
so part of: LOC118570634
location: 8411431..8411517
location: region:8411431-8411517:1
so has part: feature:8411431-8411517:1:exon

position:8411431:1
position: 8411431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8411517:1
position: 8411517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8411431-8411517:1:exon

LOC118570634
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570634
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC118570634
subclass of: SO_0000673
so part of: LOC118570634
location: 8411851..8411935
location: region:8411851-8411935:1
so has part: feature:8411851-8411935:1:exon

position:8411851:1
position: 8411851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8411851-8411935:1:exon

Nr2e1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Nr2e1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8608226..8628926
location: region:8608226-8628926:1
so has part: feature:8608226-8628926:1:exon
subclass of: SO_0000010

118570464
type: Gene
SIO_000068: ncbigene

position:8608226:1
position: 8608226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8628926:1
position: 8628926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8608226-8628926:1:exon

Nr2e1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Nr2e1
product: nuclear receptor subfamily 2 group E member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036168976.1
SIO_010081: Nr2e1
subclass of: SO_0000673
so part of: Nr2e1
location: join(8608226..8608319,8612894..8613039,8616453..8616540,8617910..8618145,8619326..8619472,8621902..8621998,8622386..8622535,8622807..8622912,8627496..8628926)
location: region:8608226-8628926:1
so has part: feature:8608226-8608319:1:exon
so has part: feature:8612894-8613039:1:exon
so has part: feature:8616453-8616540:1:exon
so has part: feature:8617910-8618145:1:exon
so has part: feature:8619326-8619472:1:exon
so has part: feature:8621902-8621998:1:exon
so has part: feature:8622386-8622535:1:exon
so has part: feature:8622807-8622912:1:exon
so has part: feature:8627496-8628926:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8608226-8608319:1:exon

position:8608319:1
position: 8608319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8612894-8613039:1:exon

position:8612894:1
position: 8612894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8613039:1
position: 8613039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8616453-8616540:1:exon

position:8616453:1
position: 8616453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8616540:1
position: 8616540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8617910-8618145:1:exon

position:8617910:1
position: 8617910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8618145:1
position: 8618145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8619326-8619472:1:exon

position:8619326:1
position: 8619326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8619472:1
position: 8619472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8621902-8621998:1:exon

position:8621902:1
position: 8621902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8621998:1
position: 8621998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8622386-8622535:1:exon

position:8622386:1
position: 8622386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8622535:1
position: 8622535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8622807-8622912:1:exon

position:8622807:1
position: 8622807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8622912:1
position: 8622912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8627496-8628926:1:exon

position:8627496:1
position: 8627496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nr2e1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Nr2e1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group E member 1 isoform X2
translation: MSKPAGSTSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEDNGTAAHFPSAALPTPAFFTAVTQLEPHSLELAAVSATPERQTLVSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGLAQWAIPVDANTLLAVSGMNSDNTDSQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAGAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMYKSSDI
SIO_010081: Nr2e1
subclass of: SO_0000673
so part of: Nr2e1
location: join(8608295..8608319,8612894..8613039,8616453..8616540,8617910..8618145,8619326..8619472,8621902..8621998,8622386..8622535,8622807..8622912,8627496..8627658)
location: region:8608295-8627658:1
so has part: feature:8608295-8608319:1:exon
so has part: feature:8612894-8613039:1:exon
so has part: feature:8616453-8616540:1:exon
so has part: feature:8617910-8618145:1:exon
so has part: feature:8619326-8619472:1:exon
so has part: feature:8621902-8621998:1:exon
so has part: feature:8622386-8622535:1:exon
so has part: feature:8622807-8622912:1:exon
so has part: feature:8627496-8627658:1:exon

XP_036024869.1
type: Protein
SIO_000068: ncbiprotein

position:8608295:1
position: 8608295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8627658:1
position: 8627658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8608295-8608319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8612894-8613039:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8616453-8616540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8617910-8618145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8619326-8619472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8621902-8621998:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8622386-8622535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8622807-8622912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8627496-8627658:1:exon

Nr2e1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Nr2e1
product: nuclear receptor subfamily 2 group E member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_036168975.1
SIO_010081: Nr2e1
subclass of: SO_0000673
so part of: Nr2e1
location: join(8609271..8609452,8612894..8613039,8616453..8616540,8617910..8618145,8619326..8619472,8621902..8621998,8622386..8622535,8622807..8622912,8627496..8628926)
location: region:8609271-8628926:1
so has part: feature:8609271-8609452:1:exon
so has part: feature:8612894-8613039:1:exon
so has part: feature:8616453-8616540:1:exon
so has part: feature:8617910-8618145:1:exon
so has part: feature:8619326-8619472:1:exon
so has part: feature:8621902-8621998:1:exon
so has part: feature:8622386-8622535:1:exon
so has part: feature:8622807-8622912:1:exon
so has part: feature:8627496-8628926:1:exon

position:8609271:1
position: 8609271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8609271-8609452:1:exon

position:8609452:1
position: 8609452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8612894-8613039:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8616453-8616540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8617910-8618145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8619326-8619472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8621902-8621998:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8622386-8622535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8622807-8622912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8627496-8628926:1:exon

Nr2e1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Nr2e1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group E member 1 isoform X1
translation: MKSHLGWMQFRPPPPSPVRSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEDNGTAAHFPSAALPTPAFFTAVTQLEPHSLELAAVSATPERQTLVSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGLAQWAIPVDANTLLAVSGMNSDNTDSQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAGAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMYKSSDI
SIO_010081: Nr2e1
subclass of: SO_0000673
so part of: Nr2e1
location: join(8609395..8609452,8612894..8613039,8616453..8616540,8617910..8618145,8619326..8619472,8621902..8621998,8622386..8622535,8622807..8622912,8627496..8627658)
location: region:8609395-8627658:1
so has part: feature:8609395-8609452:1:exon
so has part: feature:8612894-8613039:1:exon
so has part: feature:8616453-8616540:1:exon
so has part: feature:8617910-8618145:1:exon
so has part: feature:8619326-8619472:1:exon
so has part: feature:8621902-8621998:1:exon
so has part: feature:8622386-8622535:1:exon
so has part: feature:8622807-8622912:1:exon
so has part: feature:8627496-8627658:1:exon

XP_036024868.1
type: Protein
SIO_000068: ncbiprotein

position:8609395:1
position: 8609395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8609395-8609452:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8612894-8613039:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8616453-8616540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8617910-8618145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8619326-8619472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8621902-8621998:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8622386-8622535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8622807-8622912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8627496-8627658:1:exon

Snx3
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Snx3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8658345..8694935)
location: region:8658345-8694935:-1
so has part: feature:8658345-8694935:-1:exon
subclass of: SO_0000010

118570708
type: Gene
SIO_000068: ncbigene

position:8658345:-1
position: 8658345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8694935:-1
position: 8694935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8658345-8694935:-1:exon

Snx3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Snx3
product: sorting nexin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169366.1
SIO_010081: Snx3
subclass of: SO_0000673
so part of: Snx3
location: complement(join(8658345..8659016,8661056..8661180,8664626..8664721,8694456..8694935))
location: region:8658345-8694935:-1
so has part: feature:8694456-8694935:-1:exon
so has part: feature:8664626-8664721:-1:exon
so has part: feature:8661056-8661180:-1:exon
so has part: feature:8658345-8659016:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8694456-8694935:-1:exon

position:8694456:-1
position: 8694456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8664626-8664721:-1:exon

position:8664626:-1
position: 8664626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8664721:-1
position: 8664721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8661056-8661180:-1:exon

position:8661056:-1
position: 8661056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8661180:-1
position: 8661180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8658345-8659016:-1:exon

position:8659016:-1
position: 8659016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Snx3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Snx3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-3
translation: MAETVADTRRLITKPQNLNDAYGPPSNFLEIDVSNPQTVGVGRGRFTTYEIRVKTNLPIFKLKESTVRRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFRGDDGIFDDNFIEERKQGLEQFINKVAGHPLAQNERCLHMFLQDEIIDKSYTPSKIRHA
SIO_010081: Snx3
subclass of: SO_0000673
so part of: Snx3
location: complement(join(8658911..8659016,8661056..8661180,8664626..8664721,8694456..8694617))
location: region:8658911-8694617:-1
so has part: feature:8694456-8694617:-1:exon
so has part: feature:8664626-8664721:-1:exon
so has part: feature:8661056-8661180:-1:exon
so has part: feature:8658911-8659016:-1:exon

XP_036025259.1
type: Protein
SIO_000068: ncbiprotein

position:8658911:-1
position: 8658911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8694617:-1
position: 8694617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8694456-8694617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8664626-8664721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8661056-8661180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8658911-8659016:-1:exon

Afg1l
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Afg1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8721999..8888298
location: region:8721999-8888298:1
so has part: feature:8721999-8888298:1:exon
subclass of: SO_0000010

118570622
type: Gene
SIO_000068: ncbigene

position:8721999:1
position: 8721999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8888298:1
position: 8888298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8721999-8888298:1:exon

Afg1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Afg1l
product: AFG1 like ATPase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169287.1
SIO_010081: Afg1l
subclass of: SO_0000673
so part of: Afg1l
location: join(8721999..8722282,8744628..8744851,8761212..8761263,8774334..8774435,8775638..8775768,8782909..8783008,8801521..8801579,8838040..8838122,8854571..8854641,8854898..8854998,8881671..8881811,8884949..8885062,8887330..8888298)
location: region:8721999-8888298:1
so has part: feature:8721999-8722282:1:exon
so has part: feature:8744628-8744851:1:exon
so has part: feature:8761212-8761263:1:exon
so has part: feature:8774334-8774435:1:exon
so has part: feature:8775638-8775768:1:exon
so has part: feature:8782909-8783008:1:exon
so has part: feature:8801521-8801579:1:exon
so has part: feature:8838040-8838122:1:exon
so has part: feature:8854571-8854641:1:exon
so has part: feature:8854898-8854998:1:exon
so has part: feature:8881671-8881811:1:exon
so has part: feature:8884949-8885062:1:exon
so has part: feature:8887330-8888298:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8721999-8722282:1:exon

position:8722282:1
position: 8722282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8744628-8744851:1:exon

position:8744628:1
position: 8744628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8744851:1
position: 8744851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8761212-8761263:1:exon

position:8761212:1
position: 8761212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8761263:1
position: 8761263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8774334-8774435:1:exon

position:8774334:1
position: 8774334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8774435:1
position: 8774435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8775638-8775768:1:exon

position:8775638:1
position: 8775638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8775768:1
position: 8775768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8782909-8783008:1:exon

position:8782909:1
position: 8782909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8783008:1
position: 8783008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8801521-8801579:1:exon

position:8801521:1
position: 8801521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8801579:1
position: 8801579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8838040-8838122:1:exon

position:8838040:1
position: 8838040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8838122:1
position: 8838122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8854571-8854641:1:exon

position:8854571:1
position: 8854571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8854641:1
position: 8854641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8854898-8854998:1:exon

position:8854898:1
position: 8854898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8854998:1
position: 8854998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8881671-8881811:1:exon

position:8881671:1
position: 8881671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8881811:1
position: 8881811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8884949-8885062:1:exon

position:8884949:1
position: 8884949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8885062:1
position: 8885062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8887330-8888298:1:exon

position:8887330:1
position: 8887330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Afg1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Afg1l
product: AFG1 like ATPase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169289.1
SIO_010081: Afg1l
subclass of: SO_0000673
so part of: Afg1l
location: join(8721999..8722282,8744628..8744851,8774334..8774435,8775638..8775768,8782909..8783008,8801521..8801579,8838040..8838122,8854571..8854641,8854898..8854998,8881671..8881811,8884949..8885062,8887330..8888298)
location: region:8721999-8888298:1
so has part: feature:8721999-8722282:1:exon
so has part: feature:8744628-8744851:1:exon
so has part: feature:8774334-8774435:1:exon
so has part: feature:8775638-8775768:1:exon
so has part: feature:8782909-8783008:1:exon
so has part: feature:8801521-8801579:1:exon
so has part: feature:8838040-8838122:1:exon
so has part: feature:8854571-8854641:1:exon
so has part: feature:8854898-8854998:1:exon
so has part: feature:8881671-8881811:1:exon
so has part: feature:8884949-8885062:1:exon
so has part: feature:8887330-8888298:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8721999-8722282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8744628-8744851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8774334-8774435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8775638-8775768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8782909-8783008:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8801521-8801579:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8838040-8838122:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8854571-8854641:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8854898-8854998:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8881671-8881811:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8884949-8885062:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8887330-8888298:1:exon

Afg1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Afg1l
product: AFG1 like ATPase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_036169288.1
SIO_010081: Afg1l
subclass of: SO_0000673
so part of: Afg1l
location: join(8721999..8722282,8744628..8744851,8782909..8783008,8801521..8801579,8838040..8838122,8854571..8854641,8854898..8854998,8881671..8881811,8884949..8885062,8887330..8888298)
location: region:8721999-8888298:1
so has part: feature:8721999-8722282:1:exon
so has part: feature:8744628-8744851:1:exon
so has part: feature:8782909-8783008:1:exon
so has part: feature:8801521-8801579:1:exon
so has part: feature:8838040-8838122:1:exon
so has part: feature:8854571-8854641:1:exon
so has part: feature:8854898-8854998:1:exon
so has part: feature:8881671-8881811:1:exon
so has part: feature:8884949-8885062:1:exon
so has part: feature:8887330-8888298:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8721999-8722282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8744628-8744851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8782909-8783008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8801521-8801579:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8838040-8838122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8854571-8854641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8854898-8854998:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8881671-8881811:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8884949-8885062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8887330-8888298:1:exon

Afg1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Afg1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AFG1-like ATPase isoform X1
translation: MAACWSPLVTLRSAARSRLTGRGVGCGARAVAIPPPAPGPGSPLCKAYTVQTSEGVRPTAASEAHSKALAVCRGPLDHYDFLIKAQELRDDEHQRRVIQCLQKLLEDLKGYSIEEEGLFSKLFSRNKPPKGLYVYGDVGTGKTMVMDMFYAYVEMKRKKRVHFHGFMLDVHRRIHRLKQSLPKRKAGFMTKSYDPIAPIAEEISQEACLLCFDEFQVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKEYCKTVQLDSGIDYRKRELIPAGKLYYLTSEADVEAVMDKLFDELAQKQNDLTRPRILKVQGRELRLNKACGALADCTFEELCERPLGASDYLELSKNFDTVFVRNIPQFSLAKRTEARRFITLIDNFYDHKVRIICCASAPIASLFLHQHHDSELEQSRILMDDLGLSQDSAGLSMFTGEEEIFAFQRTISRLTEMQTEQYWMEGDRSKK
SIO_010081: Afg1l
subclass of: SO_0000673
so part of: Afg1l
location: join(8722144..8722282,8744628..8744851,8761212..8761263,8774334..8774435,8775638..8775768,8782909..8783008,8801521..8801579,8838040..8838122,8854571..8854641,8854898..8854998,8881671..8881811,8884949..8885062,8887330..8887455)
location: region:8722144-8887455:1
so has part: feature:8722144-8722282:1:exon
so has part: feature:8744628-8744851:1:exon
so has part: feature:8761212-8761263:1:exon
so has part: feature:8774334-8774435:1:exon
so has part: feature:8775638-8775768:1:exon
so has part: feature:8782909-8783008:1:exon
so has part: feature:8801521-8801579:1:exon
so has part: feature:8838040-8838122:1:exon
so has part: feature:8854571-8854641:1:exon
so has part: feature:8854898-8854998:1:exon
so has part: feature:8881671-8881811:1:exon
so has part: feature:8884949-8885062:1:exon
so has part: feature:8887330-8887455:1:exon

XP_036025180.1
type: Protein
SIO_000068: ncbiprotein

position:8722144:1
position: 8722144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8887455:1
position: 8887455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8722144-8722282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8744628-8744851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8761212-8761263:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8774334-8774435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8775638-8775768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8782909-8783008:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8801521-8801579:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8838040-8838122:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8854571-8854641:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8854898-8854998:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8881671-8881811:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8884949-8885062:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8887330-8887455:1:exon

Afg1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Afg1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AFG1-like ATPase isoform X2
translation: MAACWSPLVTLRSAARSRLTGRGVGCGARAVAIPPPAPGPGSPLCKAYTVQTSEGVRPTAASEAHSKALAVCRGPLDHYDFLIKAQELRDDEHQRRVIQCLQKLLEDLKGYSIEEEGLFSKVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKEYCKTVQLDSGIDYRKRELIPAGKLYYLTSEADVEAVMDKLFDELAQKQNDLTRPRILKVQGRELRLNKACGALADCTFEELCERPLGASDYLELSKNFDTVFVRNIPQFSLAKRTEARRFITLIDNFYDHKVRIICCASAPIASLFLHQHHDSELEQSRILMDDLGLSQDSAGLSMFTGEEEIFAFQRTISRLTEMQTEQYWMEGDRSKK
SIO_010081: Afg1l
subclass of: SO_0000673
so part of: Afg1l
location: join(8722144..8722282,8744628..8744851,8782909..8783008,8801521..8801579,8838040..8838122,8854571..8854641,8854898..8854998,8881671..8881811,8884949..8885062,8887330..8887455)
location: region:8722144-8887455:1
so has part: feature:8722144-8722282:1:exon
so has part: feature:8744628-8744851:1:exon
so has part: feature:8782909-8783008:1:exon
so has part: feature:8801521-8801579:1:exon
so has part: feature:8838040-8838122:1:exon
so has part: feature:8854571-8854641:1:exon
so has part: feature:8854898-8854998:1:exon
so has part: feature:8881671-8881811:1:exon
so has part: feature:8884949-8885062:1:exon
so has part: feature:8887330-8887455:1:exon

XP_036025181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8722144-8722282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8744628-8744851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8782909-8783008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8801521-8801579:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8838040-8838122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8854571-8854641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8854898-8854998:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8881671-8881811:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8884949-8885062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8887330-8887455:1:exon

Afg1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Afg1l
product: AFG1 like ATPase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169290.1
SIO_010081: Afg1l
subclass of: SO_0000673
so part of: Afg1l
location: join(8722412..8722533,8744628..8744851,8761212..8761263,8774334..8774435,8775638..8775768,8782909..8783008,8801521..8801579,8838040..8838122,8854571..8854641,8854898..8854998,8881671..8881811,8884949..8885062,8887330..8888298)
location: region:8722412-8888298:1
so has part: feature:8722412-8722533:1:exon
so has part: feature:8744628-8744851:1:exon
so has part: feature:8761212-8761263:1:exon
so has part: feature:8774334-8774435:1:exon
so has part: feature:8775638-8775768:1:exon
so has part: feature:8782909-8783008:1:exon
so has part: feature:8801521-8801579:1:exon
so has part: feature:8838040-8838122:1:exon
so has part: feature:8854571-8854641:1:exon
so has part: feature:8854898-8854998:1:exon
so has part: feature:8881671-8881811:1:exon
so has part: feature:8884949-8885062:1:exon
so has part: feature:8887330-8888298:1:exon

position:8722412:1
position: 8722412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8722412-8722533:1:exon

position:8722533:1
position: 8722533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8744628-8744851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8761212-8761263:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8774334-8774435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8775638-8775768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8782909-8783008:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8801521-8801579:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8838040-8838122:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8854571-8854641:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8854898-8854998:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8881671-8881811:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8884949-8885062:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8887330-8888298:1:exon

LOC118570635
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8738974..8739341)
location: region:8738974-8739341:-1
so has part: feature:8738974-8739341:-1:exon

118570635
type: Gene
SIO_000068: ncbigene

position:8738974:-1
position: 8738974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8739341:-1
position: 8739341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8738974-8739341:-1:exon

LOC118570635
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570635
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC118570635
subclass of: SO_0000673
so part of: LOC118570635
location: complement(8738974..8739341)
location: region:8738974-8739341:-1
so has part: feature:8738974-8739341:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8738974-8739341:-1:exon

Afg1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Afg1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AFG1-like ATPase isoform X3
translation: MVMDMFYAYVEMKRKKRVHFHGFMLDVHRRIHRLKQSLPKRKAGFMTKSYDPIAPIAEEISQEACLLCFDEFQVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKEYCKTVQLDSGIDYRKRELIPAGKLYYLTSEADVEAVMDKLFDELAQKQNDLTRPRILKVQGRELRLNKACGALADCTFEELCERPLGASDYLELSKNFDTVFVRNIPQFSLAKRTEARRFITLIDNFYDHKVRIICCASAPIASLFLHQHHDSELEQSRILMDDLGLSQDSAGLSMFTGEEEIFAFQRTISRLTEMQTEQYWMEGDRSKK
SIO_010081: Afg1l
subclass of: SO_0000673
so part of: Afg1l
location: join(8774348..8774435,8775638..8775768,8782909..8783008,8801521..8801579,8838040..8838122,8854571..8854641,8854898..8854998,8881671..8881811,8884949..8885062,8887330..8887455)
location: region:8774348-8887455:1
so has part: feature:8774348-8774435:1:exon
so has part: feature:8775638-8775768:1:exon
so has part: feature:8782909-8783008:1:exon
so has part: feature:8801521-8801579:1:exon
so has part: feature:8838040-8838122:1:exon
so has part: feature:8854571-8854641:1:exon
so has part: feature:8854898-8854998:1:exon
so has part: feature:8881671-8881811:1:exon
so has part: feature:8884949-8885062:1:exon
so has part: feature:8887330-8887455:1:exon

XP_036025182.1
type: Protein
SIO_000068: ncbiprotein

position:8774348:1
position: 8774348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8774348-8774435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8775638-8775768:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8782909-8783008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8801521-8801579:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8838040-8838122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8854571-8854641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8854898-8854998:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8881671-8881811:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8884949-8885062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8887330-8887455:1:exon

Afg1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Afg1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AFG1-like ATPase isoform X3
translation: MVMDMFYAYVEMKRKKRVHFHGFMLDVHRRIHRLKQSLPKRKAGFMTKSYDPIAPIAEEISQEACLLCFDEFQVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKEYCKTVQLDSGIDYRKRELIPAGKLYYLTSEADVEAVMDKLFDELAQKQNDLTRPRILKVQGRELRLNKACGALADCTFEELCERPLGASDYLELSKNFDTVFVRNIPQFSLAKRTEARRFITLIDNFYDHKVRIICCASAPIASLFLHQHHDSELEQSRILMDDLGLSQDSAGLSMFTGEEEIFAFQRTISRLTEMQTEQYWMEGDRSKK
SIO_010081: Afg1l
subclass of: SO_0000673
so part of: Afg1l
location: join(8774348..8774435,8775638..8775768,8782909..8783008,8801521..8801579,8838040..8838122,8854571..8854641,8854898..8854998,8881671..8881811,8884949..8885062,8887330..8887455)
location: region:8774348-8887455:1
so has part: feature:8774348-8774435:1:exon
so has part: feature:8775638-8775768:1:exon
so has part: feature:8782909-8783008:1:exon
so has part: feature:8801521-8801579:1:exon
so has part: feature:8838040-8838122:1:exon
so has part: feature:8854571-8854641:1:exon
so has part: feature:8854898-8854998:1:exon
so has part: feature:8881671-8881811:1:exon
so has part: feature:8884949-8885062:1:exon
so has part: feature:8887330-8887455:1:exon

XP_036025183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8774348-8774435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8775638-8775768:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8782909-8783008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8801521-8801579:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8838040-8838122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8854571-8854641:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8854898-8854998:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8881671-8881811:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8884949-8885062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8887330-8887455:1:exon

LOC118570731
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570731
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 8777651..8777811
location: region:8777651-8777811:1
so has part: feature:8777651-8777811:1:exon
subclass of: SO_0000623

118570731
type: Gene
SIO_000068: ncbigene

position:8777651:1
position: 8777651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8777811:1
position: 8777811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8777651-8777811:1:exon

LOC118570731
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: snRNA
gene: LOC118570731
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004943227.1
SIO_010081: LOC118570731
subclass of: SO_0000673
so part of: LOC118570731
location: 8777651..8777811
location: region:8777651-8777811:1
so has part: feature:8777651-8777811:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8777651-8777811:1:exon

Foxo3
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Foxo3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8943050..9040799
location: region:8943050-9040799:1
so has part: feature:8943050-9040799:1:exon
subclass of: SO_0000010

118570392
type: Gene
SIO_000068: ncbigene

position:8943050:1
position: 8943050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9040799:1
position: 9040799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8943050-9040799:1:exon

Foxo3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Foxo3
product: forkhead box O3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_036168826.1
SIO_010081: Foxo3
subclass of: SO_0000673
so part of: Foxo3
location: join(8943050..8943103,8944840..8945556,9021689..9023077,9036340..9040799)
location: region:8943050-9040799:1
so has part: feature:8943050-8943103:1:exon
so has part: feature:8944840-8945556:1:exon
so has part: feature:9021689-9023077:1:exon
so has part: feature:9036340-9040799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8943050-8943103:1:exon

position:8943103:1
position: 8943103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8944840-8945556:1:exon

position:8944840:1
position: 8944840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8945556:1
position: 8945556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9021689-9023077:1:exon

position:9021689:1
position: 9021689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9023077:1
position: 9023077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9036340-9040799:1:exon

position:9036340:1
position: 9036340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Foxo3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Foxo3
product: forkhead box O3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036168825.1
SIO_010081: Foxo3
subclass of: SO_0000673
so part of: Foxo3
location: join(8943535..8943788,8944840..8945556,9021689..9023077,9036340..9040799)
location: region:8943535-9040799:1
so has part: feature:8943535-8943788:1:exon
so has part: feature:8944840-8945556:1:exon
so has part: feature:9021689-9023077:1:exon
so has part: feature:9036340-9040799:1:exon

position:8943535:1
position: 8943535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8943535-8943788:1:exon

position:8943788:1
position: 8943788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8944840-8945556:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9021689-9023077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9036340-9040799:1:exon

Foxo3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Foxo3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein O3
translation: MAEAPASPVPLSPLEVELDPEFEPQSRPRSCTWPLQRPELQASPAKPSGETAADSMIPEEDDDEDDEDGGGRASSAMVIGGGLSSTLGSGLLLEDSARLLAPGGQDLGSGPASAAGALSGGTQTPLQPQQPLPPLQPGAAGASGQPRKCSSRRNAWGNLSYADLITRAIESSPDKRLTLSQIYEWMVRCVPYFKDKGDSNSSAGWKNSIRHNLSLHSRFMRVQNEGTGKSSWWIINPDGGKSGKAPRRRAVSMDNSNKYTKSRGRAAKKKAALQAAPESADDSPSQLSKWPGSPTSRSSDELDAWTDFRSRTNSNASTVSGRLSPILASTELDDVQDDDAPLSPMLYSSSASLSPSVSKPCTVELPRLTDMAGTMNLNDGLTDNLMDDLLDNITLPPSQPSPPGGLMQRSSSFPYTAKSSGLGSPTSSFNSTVFGPSSLNSLRQSPMQTIQENKAATFSSMAHYGNQTLQDLLTSDSLSHSDVMMTQSDPLMSQASTAVSAQNARRNVMLRNDPMMSFAAQPTQGSLVNQNLLHHQHQTQGALGGSRALSNSVSSLGSAKHQQQSHVSQSMQTLSDSPSGSSLYSASANLPVLGHDKFPSDLDLDIFNGSLECDMESIIRSELMDADGLDFNFDSLISSQNVVGLNVGNFTGAKQASSQSWVPG
SIO_010081: Foxo3
subclass of: SO_0000673
so part of: Foxo3
location: join(8944939..8945556,9021689..9023065)
location: region:8944939-9023065:1
so has part: feature:8944939-8945556:1:exon
so has part: feature:9021689-9023065:1:exon

XP_036024718.1
type: Protein
SIO_000068: ncbiprotein

position:8944939:1
position: 8944939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9023065:1
position: 9023065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8944939-8945556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9021689-9023065:1:exon

Foxo3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Foxo3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein O3
translation: MAEAPASPVPLSPLEVELDPEFEPQSRPRSCTWPLQRPELQASPAKPSGETAADSMIPEEDDDEDDEDGGGRASSAMVIGGGLSSTLGSGLLLEDSARLLAPGGQDLGSGPASAAGALSGGTQTPLQPQQPLPPLQPGAAGASGQPRKCSSRRNAWGNLSYADLITRAIESSPDKRLTLSQIYEWMVRCVPYFKDKGDSNSSAGWKNSIRHNLSLHSRFMRVQNEGTGKSSWWIINPDGGKSGKAPRRRAVSMDNSNKYTKSRGRAAKKKAALQAAPESADDSPSQLSKWPGSPTSRSSDELDAWTDFRSRTNSNASTVSGRLSPILASTELDDVQDDDAPLSPMLYSSSASLSPSVSKPCTVELPRLTDMAGTMNLNDGLTDNLMDDLLDNITLPPSQPSPPGGLMQRSSSFPYTAKSSGLGSPTSSFNSTVFGPSSLNSLRQSPMQTIQENKAATFSSMAHYGNQTLQDLLTSDSLSHSDVMMTQSDPLMSQASTAVSAQNARRNVMLRNDPMMSFAAQPTQGSLVNQNLLHHQHQTQGALGGSRALSNSVSSLGSAKHQQQSHVSQSMQTLSDSPSGSSLYSASANLPVLGHDKFPSDLDLDIFNGSLECDMESIIRSELMDADGLDFNFDSLISSQNVVGLNVGNFTGAKQASSQSWVPG
SIO_010081: Foxo3
subclass of: SO_0000673
so part of: Foxo3
location: join(8944939..8945556,9021689..9023065)
location: region:8944939-9023065:1
so has part: feature:8944939-8945556:1:exon
so has part: feature:9021689-9023065:1:exon

XP_036024719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8944939-8945556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9021689-9023065:1:exon

Armc2
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Armc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9182329..9300325
location: region:9182329-9300325:1
so has part: feature:9182329-9300325:1:exon
subclass of: SO_0000010

118570474
type: Gene
SIO_000068: ncbigene

position:9182329:1
position: 9182329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9300325:1
position: 9300325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9182329-9300325:1:exon

Armc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Armc2
product: armadillo repeat containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036168994.1
SIO_010081: Armc2
subclass of: SO_0000673
so part of: Armc2
location: join(9182329..9182496,9189107..9189362,9194260..9194332,9197580..9197654,9202814..9202982,9210571..9210757,9221116..9221187,9222396..9222472,9227058..9227156,9230853..9231025,9235765..9235867,9237486..9237709,9253410..9253555,9257283..9257382,9285089..9285389,9287865..9287987,9288544..9288657,9291543..9291675,9291976..9292136,9299398..9300325)
location: region:9182329-9300325:1
so has part: feature:9182329-9182496:1:exon
so has part: feature:9189107-9189362:1:exon
so has part: feature:9194260-9194332:1:exon
so has part: feature:9197580-9197654:1:exon
so has part: feature:9202814-9202982:1:exon
so has part: feature:9210571-9210757:1:exon
so has part: feature:9221116-9221187:1:exon
so has part: feature:9222396-9222472:1:exon
so has part: feature:9227058-9227156:1:exon
so has part: feature:9230853-9231025:1:exon
so has part: feature:9235765-9235867:1:exon
so has part: feature:9237486-9237709:1:exon
so has part: feature:9253410-9253555:1:exon
so has part: feature:9257283-9257382:1:exon
so has part: feature:9285089-9285389:1:exon
so has part: feature:9287865-9287987:1:exon
so has part: feature:9288544-9288657:1:exon
so has part: feature:9291543-9291675:1:exon
so has part: feature:9291976-9292136:1:exon
so has part: feature:9299398-9300325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9182329-9182496:1:exon

position:9182496:1
position: 9182496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9189107-9189362:1:exon

position:9189107:1
position: 9189107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9189362:1
position: 9189362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9194260-9194332:1:exon

position:9194260:1
position: 9194260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9194332:1
position: 9194332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9197580-9197654:1:exon

position:9197580:1
position: 9197580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9197654:1
position: 9197654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9202814-9202982:1:exon

position:9202814:1
position: 9202814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9202982:1
position: 9202982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9210571-9210757:1:exon

position:9210571:1
position: 9210571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9210757:1
position: 9210757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9221116-9221187:1:exon

position:9221116:1
position: 9221116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9221187:1
position: 9221187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9222396-9222472:1:exon

position:9222396:1
position: 9222396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9222472:1
position: 9222472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9227058-9227156:1:exon

position:9227058:1
position: 9227058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9227156:1
position: 9227156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9230853-9231025:1:exon

position:9230853:1
position: 9230853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9231025:1
position: 9231025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9235765-9235867:1:exon

position:9235765:1
position: 9235765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9235867:1
position: 9235867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9237486-9237709:1:exon

position:9237486:1
position: 9237486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9237709:1
position: 9237709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9253410-9253555:1:exon

position:9253410:1
position: 9253410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9253555:1
position: 9253555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9257283-9257382:1:exon

position:9257283:1
position: 9257283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9257382:1
position: 9257382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9285089-9285389:1:exon

position:9285089:1
position: 9285089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9285389:1
position: 9285389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9287865-9287987:1:exon

position:9287865:1
position: 9287865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9287987:1
position: 9287987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9288544-9288657:1:exon

position:9288544:1
position: 9288544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9288657:1
position: 9288657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9291543-9291675:1:exon

position:9291543:1
position: 9291543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9291675:1
position: 9291675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9291976-9292136:1:exon

position:9291976:1
position: 9291976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9292136:1
position: 9292136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9299398-9300325:1:exon

position:9299398:1
position: 9299398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Armc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Armc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 2
translation: MLSPNGQKLEKLDPFHRPLLSKQKTSAEIISEARNALRSVRTQRPFTPREDQRKLFGPASSRTPENRPPSSFSLHASSFELADSRPISGARLSPLELVGKTLPSPWGSEKSGQKLVRNHEARKPRAPESPSTEEDACPCLPKPPLDPVKIRRISGGQSRFYRAASQGSLLPGRSAADPSKTTEESKETEGDSTAKVHGTYLTASNAIGHLKSHPLQRTYDQGFRETKEVSKEPPSHLRSGGSEAAHMRHRGADLTPGQDSERAGRDQGKRRARASSCPSSSDLSRLETRAASRASLQEQETEIEVDEVFWKTQIEPLLHGLEKEDIEAVCAACTQLHHTLEEGRMLGRKFKGRSVLLKALYKLVDAGSDSLNLKLAKLILALKVSRKNLLNVCKLVFKISRSKENDVLLLNDNILESLLEVLRGEDLQSNTEAFLYCMGALKFISGSPAFLPEMISKGAVEILTKLIKQMSEDTKKYGACLPNAGNLLVQTTATLRNLADSPLTRSRLLKVGAFPQLCTVMEQYMDDKDVCTNIARIFSKLTSYHDCCAALASYSRCYALFLSLLNKYQKKQDLVIRIVFILGNLTAKNNQAREVFSREQGSIETLLTLFQNFYQLDQHPPRLGLSGASLAAEAEDVLVKLTRVLANIAIHPRIGPVLAANPRVVGLLLTTLESKSLGDCEELVINTTAAINNLSFYQVKSSILQHKKLYVAELLLKLLVSNNMDGILEAVRVFGNLSQDHDVCNFLMQKNVHKFMIALLEAKHQDICFAACGVLLNLTVEKDKRAVLKEGGGIKKLVDCLREFGPGDWQLACLVCKTLWNFSENITSASSCFGDEDADRLLVLLSSFLDEELALDGSFDQDLKSYHRLHWETEFKPVAQQLLKRIQSHHTSLEPLPTPSF
SIO_010081: Armc2
subclass of: SO_0000673
so part of: Armc2
location: join(9189145..9189362,9194260..9194332,9197580..9197654,9202814..9202982,9210571..9210757,9221116..9221187,9222396..9222472,9227058..9227156,9230853..9231025,9235765..9235867,9237486..9237709,9253410..9253555,9257283..9257382,9285089..9285389,9287865..9287987,9288544..9288657,9291543..9291675,9291976..9292136,9299398..9299555)
location: region:9189145-9299555:1
so has part: feature:9189145-9189362:1:exon
so has part: feature:9194260-9194332:1:exon
so has part: feature:9197580-9197654:1:exon
so has part: feature:9202814-9202982:1:exon
so has part: feature:9210571-9210757:1:exon
so has part: feature:9221116-9221187:1:exon
so has part: feature:9222396-9222472:1:exon
so has part: feature:9227058-9227156:1:exon
so has part: feature:9230853-9231025:1:exon
so has part: feature:9235765-9235867:1:exon
so has part: feature:9237486-9237709:1:exon
so has part: feature:9253410-9253555:1:exon
so has part: feature:9257283-9257382:1:exon
so has part: feature:9285089-9285389:1:exon
so has part: feature:9287865-9287987:1:exon
so has part: feature:9288544-9288657:1:exon
so has part: feature:9291543-9291675:1:exon
so has part: feature:9291976-9292136:1:exon
so has part: feature:9299398-9299555:1:exon

XP_036024887.1
type: Protein
SIO_000068: ncbiprotein

position:9189145:1
position: 9189145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9299555:1
position: 9299555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9189145-9189362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9194260-9194332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9197580-9197654:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9202814-9202982:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9210571-9210757:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9221116-9221187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9222396-9222472:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9227058-9227156:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9230853-9231025:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9235765-9235867:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9237486-9237709:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9253410-9253555:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9257283-9257382:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9285089-9285389:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9287865-9287987:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9288544-9288657:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9291543-9291675:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9291976-9292136:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9299398-9299555:1:exon

Sesn1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Sesn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9319660..9424647)
location: region:9319660-9424647:-1
so has part: feature:9319660-9424647:-1:exon
subclass of: SO_0000010

118570227
type: Gene
SIO_000068: ncbigene

position:9319660:-1
position: 9319660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9424647:-1
position: 9424647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9319660-9424647:-1:exon

Sesn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Sesn1
product: sestrin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036168582.1
SIO_010081: Sesn1
subclass of: SO_0000673
so part of: Sesn1
location: complement(join(9319660..9320823,9321671..9321815,9323045..9323235,9324702..9324814,9325668..9325815,9331022..9331264,9333260..9333442,9334578..9334778,9335536..9335601,9423759..9424647))
location: region:9319660-9424647:-1
so has part: feature:9423759-9424647:-1:exon
so has part: feature:9335536-9335601:-1:exon
so has part: feature:9334578-9334778:-1:exon
so has part: feature:9333260-9333442:-1:exon
so has part: feature:9331022-9331264:-1:exon
so has part: feature:9325668-9325815:-1:exon
so has part: feature:9324702-9324814:-1:exon
so has part: feature:9323045-9323235:-1:exon
so has part: feature:9321671-9321815:-1:exon
so has part: feature:9319660-9320823:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9423759-9424647:-1:exon

position:9423759:-1
position: 9423759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9335536-9335601:-1:exon

position:9335536:-1
position: 9335536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9335601:-1
position: 9335601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9334578-9334778:-1:exon

position:9334578:-1
position: 9334578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9334778:-1
position: 9334778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9333260-9333442:-1:exon

position:9333260:-1
position: 9333260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9333442:-1
position: 9333442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9331022-9331264:-1:exon

position:9331022:-1
position: 9331022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9331264:-1
position: 9331264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9325668-9325815:-1:exon

position:9325668:-1
position: 9325668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9325815:-1
position: 9325815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9324702-9324814:-1:exon

position:9324702:-1
position: 9324702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9324814:-1
position: 9324814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9323045-9323235:-1:exon

position:9323045:-1
position: 9323045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9323235:-1
position: 9323235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9321671-9321815:-1:exon

position:9321671:-1
position: 9321671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9321815:-1
position: 9321815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9319660-9320823:-1:exon

position:9320823:-1
position: 9320823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Sesn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Sesn1
product: sestrin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036168583.1
SIO_010081: Sesn1
subclass of: SO_0000673
so part of: Sesn1
location: complement(join(9319660..9320823,9321671..9321815,9323045..9323235,9324702..9324814,9325668..9325815,9331022..9331264,9333260..9333442,9334578..9334778,9335536..9335601,9343271..9343430))
location: region:9319660-9343430:-1
so has part: feature:9343271-9343430:-1:exon
so has part: feature:9335536-9335601:-1:exon
so has part: feature:9334578-9334778:-1:exon
so has part: feature:9333260-9333442:-1:exon
so has part: feature:9331022-9331264:-1:exon
so has part: feature:9325668-9325815:-1:exon
so has part: feature:9324702-9324814:-1:exon
so has part: feature:9323045-9323235:-1:exon
so has part: feature:9321671-9321815:-1:exon
so has part: feature:9319660-9320823:-1:exon

position:9343430:-1
position: 9343430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9343271-9343430:-1:exon

position:9343271:-1
position: 9343271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9335536-9335601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9334578-9334778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9333260-9333442:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9331022-9331264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9325668-9325815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9324702-9324814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9323045-9323235:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9321671-9321815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9319660-9320823:-1:exon

Sesn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Sesn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sestrin-1 isoform X1
translation: MAEGENEVRWDGLCSRDSTIRETALENIRQIILRKTEYLRSVKEPLYRPSDGLSNAVSLDGMNKLLAHLLMLSKRCPFKDVRERSGFILKSVEELGIRIPRPLGHGPSRFIPEKEILQVGSEDAQMHALFADSFAALGRLDNITLVMVFHPQYLESFLKTQHYLLQMDGPLPLHYRHYIGIMAAARHQCSYLVNLHVNDFLHVGGDPKWLNGLENAPQKLQNLGELNKVLAHRPWLITKEHIEGLLKAEEQSWSLAELVHAVVLLTHYHSLASFTFGCGISPEIQCDGGHTFRPPSVSNYCICDITNGNHGMDEMQVNSAGSISVSESFFEVEALMEKMKQLQECRDEEEASQEEMASRFEMEKNESMFVFSSDDDEVTPARDVSRHFEDTSYGYKDFSRHGMHVPTFRVQDYCWEDHGYSLVNRLYPDVGQLIDEKFHIAYNLTYNTMAMHKDVDTSMLRRAIWNYIHCMFGIRYDDYDYGEINQLLDRSFKVYIKTVVCTPEKVTKRMYDSFWRQFKHSEKVHVNLLLIEARMQAELLYALRAITRYMT
SIO_010081: Sesn1
subclass of: SO_0000673
so part of: Sesn1
location: complement(join(9320737..9320823,9321671..9321815,9323045..9323235,9324702..9324814,9325668..9325815,9331022..9331264,9333260..9333442,9334578..9334778,9335536..9335601,9423759..9424037))
location: region:9320737-9424037:-1
so has part: feature:9423759-9424037:-1:exon
so has part: feature:9335536-9335601:-1:exon
so has part: feature:9334578-9334778:-1:exon
so has part: feature:9333260-9333442:-1:exon
so has part: feature:9331022-9331264:-1:exon
so has part: feature:9325668-9325815:-1:exon
so has part: feature:9324702-9324814:-1:exon
so has part: feature:9323045-9323235:-1:exon
so has part: feature:9321671-9321815:-1:exon
so has part: feature:9320737-9320823:-1:exon

XP_036024475.1
type: Protein
SIO_000068: ncbiprotein

position:9320737:-1
position: 9320737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9424037:-1
position: 9424037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9423759-9424037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9335536-9335601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9334578-9334778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9333260-9333442:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9331022-9331264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9325668-9325815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9324702-9324814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9323045-9323235:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9321671-9321815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9320737-9320823:-1:exon

Sesn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Sesn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sestrin-1 isoform X2
translation: MRLAAAANEAYTASLAVTELLGCHQCGGGRGQDEELGIRIPRPLGHGPSRFIPEKEILQVGSEDAQMHALFADSFAALGRLDNITLVMVFHPQYLESFLKTQHYLLQMDGPLPLHYRHYIGIMAAARHQCSYLVNLHVNDFLHVGGDPKWLNGLENAPQKLQNLGELNKVLAHRPWLITKEHIEGLLKAEEQSWSLAELVHAVVLLTHYHSLASFTFGCGISPEIQCDGGHTFRPPSVSNYCICDITNGNHGMDEMQVNSAGSISVSESFFEVEALMEKMKQLQECRDEEEASQEEMASRFEMEKNESMFVFSSDDDEVTPARDVSRHFEDTSYGYKDFSRHGMHVPTFRVQDYCWEDHGYSLVNRLYPDVGQLIDEKFHIAYNLTYNTMAMHKDVDTSMLRRAIWNYIHCMFGIRYDDYDYGEINQLLDRSFKVYIKTVVCTPEKVTKRMYDSFWRQFKHSEKVHVNLLLIEARMQAELLYALRAITRYMT
SIO_010081: Sesn1
subclass of: SO_0000673
so part of: Sesn1
location: complement(join(9320737..9320823,9321671..9321815,9323045..9323235,9324702..9324814,9325668..9325815,9331022..9331264,9333260..9333442,9334578..9334778,9335536..9335601,9343271..9343372))
location: region:9320737-9343372:-1
so has part: feature:9343271-9343372:-1:exon
so has part: feature:9335536-9335601:-1:exon
so has part: feature:9334578-9334778:-1:exon
so has part: feature:9333260-9333442:-1:exon
so has part: feature:9331022-9331264:-1:exon
so has part: feature:9325668-9325815:-1:exon
so has part: feature:9324702-9324814:-1:exon
so has part: feature:9323045-9323235:-1:exon
so has part: feature:9321671-9321815:-1:exon
so has part: feature:9320737-9320823:-1:exon

XP_036024476.1
type: Protein
SIO_000068: ncbiprotein

position:9343372:-1
position: 9343372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9343271-9343372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9335536-9335601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9334578-9334778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9333260-9333442:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9331022-9331264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9325668-9325815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9324702-9324814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9323045-9323235:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9321671-9321815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9320737-9320823:-1:exon

LOC118570636
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570636
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(9378862..9380119)
location: region:9378862-9380119:-1
so has part: feature:9378862-9380119:-1:exon

118570636
type: Gene
SIO_000068: ncbigene

position:9378862:-1
position: 9378862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9380119:-1
position: 9380119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9378862-9380119:-1:exon

LOC118570636
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118570636
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC118570636
subclass of: SO_0000673
so part of: LOC118570636
location: complement(9378862..9380119)
location: region:9378862-9380119:-1
so has part: feature:9378862-9380119:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9378862-9380119:-1:exon

Cep57l1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Cep57l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9425098..9486072
location: region:9425098-9486072:1
so has part: feature:9425098-9486072:1:exon
subclass of: SO_0000010

118570229
type: Gene
SIO_000068: ncbigene

position:9425098:1
position: 9425098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9486072:1
position: 9486072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9425098-9486072:1:exon

Cep57l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Cep57l1
product: centrosomal protein 57 like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036168586.1
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(9425098..9425196,9457941..9458158,9459199..9459361,9460815..9460994,9462756..9462877,9471516..9471632,9477694..9477771,9478408..9478494,9481407..9481484,9481993..9482186,9483604..9483748,9485196..9486072)
location: region:9425098-9486072:1
so has part: feature:9425098-9425196:1:exon
so has part: feature:9457941-9458158:1:exon
so has part: feature:9459199-9459361:1:exon
so has part: feature:9460815-9460994:1:exon
so has part: feature:9462756-9462877:1:exon
so has part: feature:9471516-9471632:1:exon
so has part: feature:9477694-9477771:1:exon
so has part: feature:9478408-9478494:1:exon
so has part: feature:9481407-9481484:1:exon
so has part: feature:9481993-9482186:1:exon
so has part: feature:9483604-9483748:1:exon
so has part: feature:9485196-9486072:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9425098-9425196:1:exon

position:9425196:1
position: 9425196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9457941-9458158:1:exon

position:9457941:1
position: 9457941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9458158:1
position: 9458158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9459199-9459361:1:exon

position:9459199:1
position: 9459199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9459361:1
position: 9459361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9460815-9460994:1:exon

position:9460815:1
position: 9460815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9460994:1
position: 9460994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9462756-9462877:1:exon

position:9462756:1
position: 9462756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9462877:1
position: 9462877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9471516-9471632:1:exon

position:9471516:1
position: 9471516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9471632:1
position: 9471632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9477694-9477771:1:exon

position:9477694:1
position: 9477694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9477771:1
position: 9477771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9478408-9478494:1:exon

position:9478408:1
position: 9478408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9478494:1
position: 9478494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9481407-9481484:1:exon

position:9481407:1
position: 9481407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9481484:1
position: 9481484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9481993-9482186:1:exon

position:9481993:1
position: 9481993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9482186:1
position: 9482186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9483604-9483748:1:exon

position:9483604:1
position: 9483604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9483748:1
position: 9483748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9485196-9486072:1:exon

position:9485196:1
position: 9485196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cep57l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Cep57l1
product: centrosomal protein 57 like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_036168584.1
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(9425213..9425473,9459199..9459361,9460815..9460994,9462756..9462877,9471516..9471632,9477694..9477771,9478408..9478494,9481407..9481484,9481993..9482186,9483604..9483748,9485196..9486072)
location: region:9425213-9486072:1
so has part: feature:9425213-9425473:1:exon
so has part: feature:9459199-9459361:1:exon
so has part: feature:9460815-9460994:1:exon
so has part: feature:9462756-9462877:1:exon
so has part: feature:9471516-9471632:1:exon
so has part: feature:9477694-9477771:1:exon
so has part: feature:9478408-9478494:1:exon
so has part: feature:9481407-9481484:1:exon
so has part: feature:9481993-9482186:1:exon
so has part: feature:9483604-9483748:1:exon
so has part: feature:9485196-9486072:1:exon

position:9425213:1
position: 9425213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9425213-9425473:1:exon

position:9425473:1
position: 9425473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9459199-9459361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9460815-9460994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9462756-9462877:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9471516-9471632:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9477694-9477771:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9478408-9478494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9481407-9481484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9481993-9482186:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9483604-9483748:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9485196-9486072:1:exon

Cep57l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Cep57l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein CEP57L1 isoform X1
translation: MLPTPSVCDRNYNSQMPPQHFWLLRASQRFWLTGNVHLTMDSELSQSVIGSYLNPPERMYLPSFTQNEASQNCHPVNSEVTSPKMFNSPNNQALVSALKTLQEKIYRLELERTQAEDNLNSLSREAAQYKKALENETNERNLAHQELIKQKKDISIQLSSAQSRCVLLEKQLEYTKRMVLNVEREKAMILEQQAQLQREKEEDQLKLHAKLAKLDVLEKECFRLTTTQQTAEEKIKYLEEKLKEEEHQRKLFQDKACELQTGLEVSKILMSTVSHSQHCKEKKKPPKKTKCLKREPPQQMDPRFRALFLEREKMMHPHGLYCLQKPVLAPEPQCLYKALRTASQSKALPLNSGEPASICDNLSELLMAMQEELDQMIVEHRELREQMTEAGSRSVSDDAEHVLEQLVRKMESKGDQISKLKKHQDSVRKLQQKVQSSRLNDPSIHWEAGSPQGPKNVKHGPRKCWNEPNPFQKNSSSHPVQVHNLQVKLRRDDIKWEQ
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(9425360..9425473,9459199..9459361,9460815..9460994,9462756..9462877,9471516..9471632,9477694..9477771,9478408..9478494,9481407..9481484,9481993..9482186,9483604..9483748,9485196..9485414)
location: region:9425360-9485414:1
so has part: feature:9425360-9425473:1:exon
so has part: feature:9459199-9459361:1:exon
so has part: feature:9460815-9460994:1:exon
so has part: feature:9462756-9462877:1:exon
so has part: feature:9471516-9471632:1:exon
so has part: feature:9477694-9477771:1:exon
so has part: feature:9478408-9478494:1:exon
so has part: feature:9481407-9481484:1:exon
so has part: feature:9481993-9482186:1:exon
so has part: feature:9483604-9483748:1:exon
so has part: feature:9485196-9485414:1:exon

XP_036024477.1
type: Protein
SIO_000068: ncbiprotein

position:9425360:1
position: 9425360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9485414:1
position: 9485414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9425360-9425473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9459199-9459361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9460815-9460994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9462756-9462877:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9471516-9471632:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9477694-9477771:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9478408-9478494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9481407-9481484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9481993-9482186:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9483604-9483748:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9485196-9485414:1:exon

Cep57l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Cep57l1
product: centrosomal protein 57 like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_036168585.1
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(9425429..9425473,9457941..9458158,9459199..9459361,9460815..9460994,9462756..9462877,9471516..9471632,9477694..9477771,9478408..9478494,9481407..9481484,9481993..9482186,9483604..9483748,9485196..9486072)
location: region:9425429-9486072:1
so has part: feature:9425429-9425473:1:exon
so has part: feature:9457941-9458158:1:exon
so has part: feature:9459199-9459361:1:exon
so has part: feature:9460815-9460994:1:exon
so has part: feature:9462756-9462877:1:exon
so has part: feature:9471516-9471632:1:exon
so has part: feature:9477694-9477771:1:exon
so has part: feature:9478408-9478494:1:exon
so has part: feature:9481407-9481484:1:exon
so has part: feature:9481993-9482186:1:exon
so has part: feature:9483604-9483748:1:exon
so has part: feature:9485196-9486072:1:exon

position:9425429:1
position: 9425429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9425429-9425473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9457941-9458158:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9459199-9459361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9460815-9460994:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9462756-9462877:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9471516-9471632:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9477694-9477771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9478408-9478494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9481407-9481484:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9481993-9482186:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9483604-9483748:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9485196-9486072:1:exon

Cep57l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Cep57l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein CEP57L1 isoform X2
translation: MDSELSQSVIGSYLNPPERMYLPSFTQNEASQNCHPVNSEVTSPKMFNSPNNQALVSALKTLQEKIYRLELERTQAEDNLNSLSREAAQYKKALENETNERNLAHQELIKQKKDISIQLSSAQSRCVLLEKQLEYTKRMVLNVEREKAMILEQQAQLQREKEEDQLKLHAKLAKLDVLEKECFRLTTTQQTAEEKIKYLEEKLKEEEHQRKLFQDKACELQTGLEVSKILMSTVSHSQHCKEKKKPPKKTKCLKREPPQQMDPRFRALFLEREKMMHPHGLYCLQKPVLAPEPQCLYKALRTASQSKALPLNSGEPASICDNLSELLMAMQEELDQMIVEHRELREQMTEAGSRSVSDDAEHVLEQLVRKMESKGDQISKLKKHQDSVRKLQQKVQSSRLNDPSIHWEAGSPQGPKNVKHGPRKCWNEPNPFQKNSSSHPVQVHNLQVKLRRDDIKWEQ
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(9459202..9459361,9460815..9460994,9462756..9462877,9471516..9471632,9477694..9477771,9478408..9478494,9481407..9481484,9481993..9482186,9483604..9483748,9485196..9485414)
location: region:9459202-9485414:1
so has part: feature:9459202-9459361:1:exon
so has part: feature:9460815-9460994:1:exon
so has part: feature:9462756-9462877:1:exon
so has part: feature:9471516-9471632:1:exon
so has part: feature:9477694-9477771:1:exon
so has part: feature:9478408-9478494:1:exon
so has part: feature:9481407-9481484:1:exon
so has part: feature:9481993-9482186:1:exon
so has part: feature:9483604-9483748:1:exon
so has part: feature:9485196-9485414:1:exon

XP_036024478.1
type: Protein
SIO_000068: ncbiprotein

position:9459202:1
position: 9459202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9459202-9459361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9460815-9460994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9462756-9462877:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9471516-9471632:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9477694-9477771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9478408-9478494:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9481407-9481484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9481993-9482186:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9483604-9483748:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9485196-9485414:1:exon

Cep57l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Cep57l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein CEP57L1 isoform X2
translation: MDSELSQSVIGSYLNPPERMYLPSFTQNEASQNCHPVNSEVTSPKMFNSPNNQALVSALKTLQEKIYRLELERTQAEDNLNSLSREAAQYKKALENETNERNLAHQELIKQKKDISIQLSSAQSRCVLLEKQLEYTKRMVLNVEREKAMILEQQAQLQREKEEDQLKLHAKLAKLDVLEKECFRLTTTQQTAEEKIKYLEEKLKEEEHQRKLFQDKACELQTGLEVSKILMSTVSHSQHCKEKKKPPKKTKCLKREPPQQMDPRFRALFLEREKMMHPHGLYCLQKPVLAPEPQCLYKALRTASQSKALPLNSGEPASICDNLSELLMAMQEELDQMIVEHRELREQMTEAGSRSVSDDAEHVLEQLVRKMESKGDQISKLKKHQDSVRKLQQKVQSSRLNDPSIHWEAGSPQGPKNVKHGPRKCWNEPNPFQKNSSSHPVQVHNLQVKLRRDDIKWEQ
SIO_010081: Cep57l1
subclass of: SO_0000673
so part of: Cep57l1
location: join(9459202..9459361,9460815..9460994,9462756..9462877,9471516..9471632,9477694..9477771,9478408..9478494,9481407..9481484,9481993..9482186,9483604..9483748,9485196..9485414)
location: region:9459202-9485414:1
so has part: feature:9459202-9459361:1:exon
so has part: feature:9460815-9460994:1:exon
so has part: feature:9462756-9462877:1:exon
so has part: feature:9471516-9471632:1:exon
so has part: feature:9477694-9477771:1:exon
so has part: feature:9478408-9478494:1:exon
so has part: feature:9481407-9481484:1:exon
so has part: feature:9481993-9482186:1:exon
so has part: feature:9483604-9483748:1:exon
so has part: feature:9485196-9485414:1:exon

XP_036024479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9459202-9459361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9460815-9460994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9462756-9462877:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9471516-9471632:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9477694-9477771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9478408-9478494:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9481407-9481484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9481993-9482186:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9483604-9483748:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9485196-9485414:1:exon

LOC118570606
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570606
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9488747..9662035
location: region:9488747-9662035:1
so has part: feature:9488747-9662035:1:exon
subclass of: SO_0000010

118570606
type: Gene
SIO_000068: ncbigene

position:9488747:1
position: 9488747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9662035:1
position: 9662035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9488747-9662035:1:exon

LOC118570606
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118570606
product: uncharacterized LOC118570606
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036169266.1
SIO_010081: LOC118570606
subclass of: SO_0000673
so part of: LOC118570606
location: join(9488747..9488769,9505350..9505510,9509332..9509404,9509631..9509741,9517162..9517275,9518640..9518834,9519960..9520101,9521485..9521642,9527032..9527178,9530203..9530304,9534068..9534229,9538135..9538250,9538616..9538748,9539252..9539455,9548715..9548907,9551229..9551356,9561392..9561592,9562242..9562363,9563975..9564203,9569038..9569240,9571651..9571806,9574343..9574436,9575212..9575349,9581978..9582132,9583076..9583187,9584460..9584509,9584910..9585086,9593388..9593505,9594821..9594986,9601472..9601610,9611112..9611262,9613588..9613683,9614709..9614861,9621134..9621366,9622227..9622365,9623487..9623607,9634175..9634284,9641019..9641168,9642807..9642860,9643685..9643853,9646103..9646255,9646503..9646637,9647178..9647330,9648647..9648856,9653265..9653385,9659371..9659498,9661452..9661573,9661660..9662035)
location: region:9488747-9662035:1
so has part: feature:9488747-9488769:1:exon
so has part: feature:9505350-9505510:1:exon
so has part: feature:9509332-9509404:1:exon
so has part: feature:9509631-9509741:1:exon
so has part: feature:9517162-9517275:1:exon
so has part: feature:9518640-9518834:1:exon
so has part: feature:9519960-9520101:1:exon
so has part: feature:9521485-9521642:1:exon
so has part: feature:9527032-9527178:1:exon
so has part: feature:9530203-9530304:1:exon
so has part: feature:9534068-9534229:1:exon
so has part: feature:9538135-9538250:1:exon
so has part: feature:9538616-9538748:1:exon
so has part: feature:9539252-9539455:1:exon
so has part: feature:9548715-9548907:1:exon
so has part: feature:9551229-9551356:1:exon
so has part: feature:9561392-9561592:1:exon
so has part: feature:9562242-9562363:1:exon
so has part: feature:9563975-9564203:1:exon
so has part: feature:9569038-9569240:1:exon
so has part: feature:9571651-9571806:1:exon
so has part: feature:9574343-9574436:1:exon
so has part: feature:9575212-9575349:1:exon
so has part: feature:9581978-9582132:1:exon
so has part: feature:9583076-9583187:1:exon
so has part: feature:9584460-9584509:1:exon
so has part: feature:9584910-9585086:1:exon
so has part: feature:9593388-9593505:1:exon
so has part: feature:9594821-9594986:1:exon
so has part: feature:9601472-9601610:1:exon
so has part: feature:9611112-9611262:1:exon
so has part: feature:9613588-9613683:1:exon
so has part: feature:9614709-9614861:1:exon
so has part: feature:9621134-9621366:1:exon
so has part: feature:9622227-9622365:1:exon
so has part: feature:9623487-9623607:1:exon
so has part: feature:9634175-9634284:1:exon
so has part: feature:9641019-9641168:1:exon
so has part: feature:9642807-9642860:1:exon
so has part: feature:9643685-9643853:1:exon
so has part: feature:9646103-9646255:1:exon
so has part: feature:9646503-9646637:1:exon
so has part: feature:9647178-9647330:1:exon
so has part: feature:9648647-9648856:1:exon
so has part: feature:9653265-9653385:1:exon
so has part: feature:9659371-9659498:1:exon
so has part: feature:9661452-9661573:1:exon
so has part: feature:9661660-9662035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9488747-9488769:1:exon

position:9488769:1
position: 9488769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9505350-9505510:1:exon

position:9505350:1
position: 9505350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9505510:1
position: 9505510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9509332-9509404:1:exon

position:9509332:1
position: 9509332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9509404:1
position: 9509404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9509631-9509741:1:exon

position:9509631:1
position: 9509631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9509741:1
position: 9509741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9517162-9517275:1:exon

position:9517162:1
position: 9517162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9517275:1
position: 9517275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9518640-9518834:1:exon

position:9518640:1
position: 9518640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9518834:1
position: 9518834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9519960-9520101:1:exon

position:9519960:1
position: 9519960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9520101:1
position: 9520101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9521485-9521642:1:exon

position:9521485:1
position: 9521485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9521642:1
position: 9521642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9527032-9527178:1:exon

position:9527032:1
position: 9527032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9527178:1
position: 9527178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9530203-9530304:1:exon

position:9530203:1
position: 9530203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9530304:1
position: 9530304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9534068-9534229:1:exon

position:9534068:1
position: 9534068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9534229:1
position: 9534229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9538135-9538250:1:exon

position:9538135:1
position: 9538135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9538250:1
position: 9538250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9538616-9538748:1:exon

position:9538616:1
position: 9538616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9538748:1
position: 9538748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9539252-9539455:1:exon

position:9539252:1
position: 9539252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9539455:1
position: 9539455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9548715-9548907:1:exon

position:9548715:1
position: 9548715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9548907:1
position: 9548907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9551229-9551356:1:exon

position:9551229:1
position: 9551229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9551356:1
position: 9551356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9561392-9561592:1:exon

position:9561392:1
position: 9561392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9561592:1
position: 9561592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9562242-9562363:1:exon

position:9562242:1
position: 9562242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9562363:1
position: 9562363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9563975-9564203:1:exon

position:9563975:1
position: 9563975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9564203:1
position: 9564203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9569038-9569240:1:exon

position:9569038:1
position: 9569038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9569240:1
position: 9569240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9571651-9571806:1:exon

position:9571651:1
position: 9571651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9571806:1
position: 9571806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:9574343-9574436:1:exon

position:9574343:1
position: 9574343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9574436:1
position: 9574436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:9575212-9575349:1:exon

position:9575212:1
position: 9575212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9575349:1
position: 9575349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:9581978-9582132:1:exon

position:9581978:1
position: 9581978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9582132:1
position: 9582132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:9583076-9583187:1:exon

position:9583076:1
position: 9583076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9583187:1
position: 9583187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:9584460-9584509:1:exon

position:9584460:1
position: 9584460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9584509:1
position: 9584509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:9584910-9585086:1:exon

position:9584910:1
position: 9584910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9585086:1
position: 9585086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:9593388-9593505:1:exon

position:9593388:1
position: 9593388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9593505:1
position: 9593505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:9594821-9594986:1:exon

position:9594821:1
position: 9594821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9594986:1
position: 9594986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:9601472-9601610:1:exon

position:9601472:1
position: 9601472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9601610:1
position: 9601610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:9611112-9611262:1:exon

position:9611112:1
position: 9611112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9611262:1
position: 9611262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:9613588-9613683:1:exon

position:9613588:1
position: 9613588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9613683:1
position: 9613683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:9614709-9614861:1:exon

position:9614709:1
position: 9614709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9614861:1
position: 9614861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:9621134-9621366:1:exon

position:9621134:1
position: 9621134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9621366:1
position: 9621366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:9622227-9622365:1:exon

position:9622227:1
position: 9622227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9622365:1
position: 9622365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:9623487-9623607:1:exon

position:9623487:1
position: 9623487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9623607:1
position: 9623607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:9634175-9634284:1:exon

position:9634175:1
position: 9634175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9634284:1
position: 9634284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:9641019-9641168:1:exon

position:9641019:1
position: 9641019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9641168:1
position: 9641168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:9642807-9642860:1:exon

position:9642807:1
position: 9642807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9642860:1
position: 9642860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:9643685-9643853:1:exon

position:9643685:1
position: 9643685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9643853:1
position: 9643853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:9646103-9646255:1:exon

position:9646103:1
position: 9646103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9646255:1
position: 9646255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:9646503-9646637:1:exon

position:9646503:1
position: 9646503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9646637:1
position: 9646637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:9647178-9647330:1:exon

position:9647178:1
position: 9647178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9647330:1
position: 9647330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:9648647-9648856:1:exon

position:9648647:1
position: 9648647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9648856:1
position: 9648856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:9653265-9653385:1:exon

position:9653265:1
position: 9653265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9653385:1
position: 9653385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:9659371-9659498:1:exon

position:9659371:1
position: 9659371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9659498:1
position: 9659498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:9661452-9661573:1:exon

position:9661452:1
position: 9661452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9661573:1
position: 9661573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:9661660-9662035:1:exon

position:9661660:1
position: 9661660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118570606
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118570606
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein LOC118570606
translation: MDGVFKLSSTERIQLLEKELAGKLSELKADLEEQELLLGTANWTFSSVQVPKDVAYFRREREVALKETLRVAESKPLVIQADVLQRELESCLRREYTPENLPLLLLQYYTERITHLVQCKHLHMLRWKRLCQTSQTMDELLPLYKKQVDYIMQEFNDAVQRADRLSTARDNFLTGKSNPPTLVTPEDLTIYTRWLVCHLYSLRTIHHYLQALQCLPISRVLQSLAHNRCSESSEEQEKACVGDLNSGSPAPTDASISGPGRRDAACVLPQHVTEKEEVKPQLRHLLSHFHIPYDLEKLSDSAEEMELFSLVSQNFQSIFTEQQRMRTFQDYEAGRAKVQNLSGPATTLKKRAAWVPFVKVKPKCDPWQKRMLTRLKERKRRDELMQLQSQVLKISDPVKVLQVLQDHAEKTVTMVPHRSSFTTSQALHPCNYDQVWQNIYSNTRLYQHKNVKDDGLLVEPSNDNDIAKIHLSQSSDGSLKQKPETGYNYAVTLQLLGLSDGMEPDQNPVLLRGAYLSFLCLRHLHIRELQRTCLGVLNYFRSVERTLTINTSGLTLVSGNLVPTVRDNSWINMAKGGLGTLQGLGAHHYVHGTPAEHKVHGGQFLEFSEAENQDDFHSIQAGCVHTQDQLGLYVMYDNALQDLMELESELLLIASHFIEKEKSHREDSKSENSQCWDWAHASVDRFAVLYDLWTWEVNLLESKRQLLDSYLEAYQHTLDPEERFTLAQAMTDIMHRRPKFDLSHSYFTKAYQDDCMCLRLHRQLVRGILSHHLEQQREYVQRLWRRDHSAAHKTFGLPLNIICRQFVSNNNSCPASENVHLLEFHPSLGLVGLIPKALEHLLREARHAHKPASPSGLAQLEQRVLQLALDLWLTSARPENWYSTQLQRDLFSAKVMGDPFLVEEVGLLALRSAVDEGQKQGQDFHALLLETFSKLLELLTLRHRLIEMSVESAYLARLYKELAQEMGFEEFHLYLRPVPFESASHKDKVDPPPPVFMTSLLEDSSRVDRYSPTTLVLAVSELDDNQIGKFSFYTKDAILKLLLHSGVENMQVALACQTAQKNALVVAVQQVSFYDIPGVDSPVDSKETSSALRHHGGMSPTRRDSRTLNSIECLLSAPTPKAPDTLTHSSEGSKTTKRAPEAFVSIQLEKMGLRDVMLNTFLSRKQKTSDRMESPDDIEKVKRELIIEYCQKLNGHMSHSALRGQIMVYCNSLRVLLDDFPTIRDTFFMVGQPNEKKGLKDSGGEFKVDPRSFQPRPRSLLSADGRVFLNLWFIPHPSEVLFMFKTLPEKAAFRALKLTLQLVASLHDIVAYLFSFAKLGNYPARFDAPLSPHPVRSDWGGAEGIGAELQGLQKMIDSLQSPQDPSQVAQALLLRREVTWLQFDAAMRHLLRTLLAAGNAPAYQSVAEGVCHGLPPLSNSLGRSIFASQLRLPQPLHPRDLQAFTMFPWRAFLEDGGPFPAMSSIPNTLEYDMQMCLCGLSDRDRKVAHGELVGVQTLMEDVLLSSYHVITEASPEWQAILGNIQPDWSKLSELCLSQSESRPKASALLDRPCDAVMSLALMKSFLILWKQLEVLKEHWGQLRLQGQEINSAPLYKQFSEIYEADIFHPSMKALARQMGKEDEFEELMIRSQSILPPKGASEIEIKTQQLQKLLESLEIHMIQEVLRKVNKEITLLLSEKSKEGSTLPTDLWKHQVMKENFSVVRPQIVERFVQRLMEKSQDNGPEISFRREHLEACLLSLGCDVMARERSNFETYSMCYEHLLQHVREKLSQREQEVDLLRKSQVPPEDCAGQLAELSHDMIMEITALRAQLTDLEEETLNLKNQIRKEVQEEYRALVQALFMTCLHIKEKLDENQLNLMQKVCELIGEVRAEGIANMKQLKKAWGSARPDEGAEENTAKEQLRPLEQDNSSALAALECKVRSLGRWRLAVQEAHLRGQLSRAEKESTHSKRECLRTKLMAKQEVNLLQQQLLAWRQALAAAQTDNRKLRRQQDTQAQL…
SIO_010081: LOC118570606
subclass of: SO_0000673
so part of: LOC118570606
location: join(9505374..9505510,9509332..9509404,9509631..9509741,9517162..9517275,9518640..9518834,9519960..9520101,9521485..9521642,9527032..9527178,9530203..9530304,9534068..9534229,9538135..9538250,9538616..9538748,9539252..9539455,9548715..9548907,9551229..9551356,9561392..9561592,9562242..9562363,9563975..9564203,9569038..9569240,9571651..9571806,9574343..9574436,9575212..9575349,9581978..9582132,9583076..9583187,9584460..9584509,9584910..9585086,9593388..9593505,9594821..9594986,9601472..9601610,9611112..9611262,9613588..9613683,9614709..9614861,9621134..9621366,9622227..9622365,9623487..9623607,9634175..9634284,9641019..9641168,9642807..9642860,9643685..9643853,9646103..9646255,9646503..9646637,9647178..9647330,9648647..9648856,9653265..9653385,9659371..9659498,9661452..9661573,9661660..9661705)
location: region:9505374-9661705:1
so has part: feature:9505374-9505510:1:exon
so has part: feature:9509332-9509404:1:exon
so has part: feature:9509631-9509741:1:exon
so has part: feature:9517162-9517275:1:exon
so has part: feature:9518640-9518834:1:exon
so has part: feature:9519960-9520101:1:exon
so has part: feature:9521485-9521642:1:exon
so has part: feature:9527032-9527178:1:exon
so has part: feature:9530203-9530304:1:exon
so has part: feature:9534068-9534229:1:exon
so has part: feature:9538135-9538250:1:exon
so has part: feature:9538616-9538748:1:exon
so has part: feature:9539252-9539455:1:exon
so has part: feature:9548715-9548907:1:exon
so has part: feature:9551229-9551356:1:exon
so has part: feature:9561392-9561592:1:exon
so has part: feature:9562242-9562363:1:exon
so has part: feature:9563975-9564203:1:exon
so has part: feature:9569038-9569240:1:exon
so has part: feature:9571651-9571806:1:exon
so has part: feature:9574343-9574436:1:exon
so has part: feature:9575212-9575349:1:exon
so has part: feature:9581978-9582132:1:exon
so has part: feature:9583076-9583187:1:exon
so has part: feature:9584460-9584509:1:exon
so has part: feature:9584910-9585086:1:exon
so has part: feature:9593388-9593505:1:exon
so has part: feature:9594821-9594986:1:exon
so has part: feature:9601472-9601610:1:exon
so has part: feature:9611112-9611262:1:exon
so has part: feature:9613588-9613683:1:exon
so has part: feature:9614709-9614861:1:exon
so has part: feature:9621134-9621366:1:exon
so has part: feature:9622227-9622365:1:exon
so has part: feature:9623487-9623607:1:exon
so has part: feature:9634175-9634284:1:exon
so has part: feature:9641019-9641168:1:exon
so has part: feature:9642807-9642860:1:exon
so has part: feature:9643685-9643853:1:exon
so has part: feature:9646103-9646255:1:exon
so has part: feature:9646503-9646637:1:exon
so has part: feature:9647178-9647330:1:exon
so has part: feature:9648647-9648856:1:exon
so has part: feature:9653265-9653385:1:exon
so has part: feature:9659371-9659498:1:exon
so has part: feature:9661452-9661573:1:exon
so has part: feature:9661660-9661705:1:exon

XP_036025159.1
type: Protein
SIO_000068: ncbiprotein

position:9505374:1
position: 9505374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9661705:1
position: 9661705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9505374-9505510:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9509332-9509404:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9509631-9509741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9517162-9517275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9518640-9518834:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9519960-9520101:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9521485-9521642:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9527032-9527178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9530203-9530304:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9534068-9534229:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9538135-9538250:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9538616-9538748:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9539252-9539455:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9548715-9548907:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9551229-9551356:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9561392-9561592:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9562242-9562363:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9563975-9564203:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9569038-9569240:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9571651-9571806:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9574343-9574436:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9575212-9575349:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9581978-9582132:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9583076-9583187:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9584460-9584509:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9584910-9585086:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:9593388-9593505:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:9594821-9594986:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:9601472-9601610:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:9611112-9611262:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:9613588-9613683:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:9614709-9614861:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:9621134-9621366:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:9622227-9622365:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:9623487-9623607:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:9634175-9634284:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:9641019-9641168:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:9642807-9642860:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:9643685-9643853:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:9646103-9646255:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:9646503-9646637:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:9647178-9647330:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:9648647-9648856:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:9653265-9653385:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:9659371-9659498:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:9661452-9661573:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:9661660-9661705:1:exon

Cd164
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Cd164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9670102..9683031)
location: region:9670102-9683031:-1
so has part: feature:9670102-9683031:-1:exon
subclass of: SO_0000010

118570438
type: Gene
SIO_000068: ncbigene

position:9670102:-1
position: 9670102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9683031:-1
position: 9683031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9670102-9683031:-1:exon

Cd164
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Cd164
product: CD164 molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036168927.1
SIO_010081: Cd164
subclass of: SO_0000673
so part of: Cd164
location: complement(join(9670102..9672506,9673816..9673872,9677547..9677582,9678630..9678701,9680008..9680094,9682770..9683031))
location: region:9670102-9683031:-1
so has part: feature:9682770-9683031:-1:exon
so has part: feature:9680008-9680094:-1:exon
so has part: feature:9678630-9678701:-1:exon
so has part: feature:9677547-9677582:-1:exon
so has part: feature:9673816-9673872:-1:exon
so has part: feature:9670102-9672506:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9682770-9683031:-1:exon

position:9682770:-1
position: 9682770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9680008-9680094:-1:exon

position:9680008:-1
position: 9680008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9680094:-1
position: 9680094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9678630-9678701:-1:exon

position:9678630:-1
position: 9678630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9678701:-1
position: 9678701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9677547-9677582:-1:exon

position:9677547:-1
position: 9677547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9677582:-1
position: 9677582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9673816-9673872:-1:exon

position:9673816:-1
position: 9673816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9673872:-1
position: 9673872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9670102-9672506:-1:exon

position:9672506:-1
position: 9672506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cd164
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Cd164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sialomucin core protein 24
translation: MSGVSRRLLWAATCLAALCVAAAQQQNSSVPPNATEIVTTKPVPTTLTPTAPPETCESRNSCVSCVNTTINNTACFWLECQEANKTYCSSTFVSNCSLMNTTASCSVPTPTPVPTNSTAKPTTRPSSPTPTPSVVTSAGTTNTTLTPTSQPERKSTFDAASFIGGIVLVLGLQAVIFFLYKFCKSKERNYHTL
SIO_010081: Cd164
subclass of: SO_0000673
so part of: Cd164
location: complement(join(9672337..9672506,9673816..9673872,9677547..9677582,9678630..9678701,9680008..9680094,9682770..9682929))
location: region:9672337-9682929:-1
so has part: feature:9682770-9682929:-1:exon
so has part: feature:9680008-9680094:-1:exon
so has part: feature:9678630-9678701:-1:exon
so has part: feature:9677547-9677582:-1:exon
so has part: feature:9673816-9673872:-1:exon
so has part: feature:9672337-9672506:-1:exon

XP_036024820.1
type: Protein
SIO_000068: ncbiprotein

position:9672337:-1
position: 9672337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9682929:-1
position: 9682929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9682770-9682929:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9680008-9680094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9678630-9678701:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9677547-9677582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9673816-9673872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9672337-9672506:-1:exon

Ppil6
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Ppil6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9690229..9722497)
location: region:9690229-9722497:-1
so has part: feature:9690229-9722497:-1:exon
subclass of: SO_0000010

118570660
type: Gene
SIO_000068: ncbigene

position:9690229:-1
position: 9690229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9722497:-1
position: 9722497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9690229-9722497:-1:exon

Ppil6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ppil6
product: peptidylprolyl isomerase like 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169327.1
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(9690229..9692047,9697651..9697786,9703851..9703907,9709390..9709495,9709636..9709698,9714271..9714459,9717968..9718063,9721804..9722497))
location: region:9690229-9722497:-1
so has part: feature:9721804-9722497:-1:exon
so has part: feature:9717968-9718063:-1:exon
so has part: feature:9714271-9714459:-1:exon
so has part: feature:9709636-9709698:-1:exon
so has part: feature:9709390-9709495:-1:exon
so has part: feature:9703851-9703907:-1:exon
so has part: feature:9697651-9697786:-1:exon
so has part: feature:9690229-9692047:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9721804-9722497:-1:exon

position:9721804:-1
position: 9721804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9717968-9718063:-1:exon

position:9717968:-1
position: 9717968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9718063:-1
position: 9718063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9714271-9714459:-1:exon

position:9714271:-1
position: 9714271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9714459:-1
position: 9714459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9709636-9709698:-1:exon

position:9709636:-1
position: 9709636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9709698:-1
position: 9709698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9709390-9709495:-1:exon

position:9709390:-1
position: 9709390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9709495:-1
position: 9709495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9703851-9703907:-1:exon

position:9703851:-1
position: 9703851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9703907:-1
position: 9703907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9697651-9697786:-1:exon

position:9697651:-1
position: 9697651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9697786:-1
position: 9697786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9690229-9692047:-1:exon

position:9692047:-1
position: 9692047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ppil6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ppil6
product: peptidylprolyl isomerase like 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_036169325.1
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(9690229..9692047,9697651..9697786,9703851..9703907,9709390..9709537,9709636..9709698,9714271..9714459,9717968..9718063,9721169..9721870))
location: region:9690229-9721870:-1
so has part: feature:9721169-9721870:-1:exon
so has part: feature:9717968-9718063:-1:exon
so has part: feature:9714271-9714459:-1:exon
so has part: feature:9709636-9709698:-1:exon
so has part: feature:9709390-9709537:-1:exon
so has part: feature:9703851-9703907:-1:exon
so has part: feature:9697651-9697786:-1:exon
so has part: feature:9690229-9692047:-1:exon

position:9721870:-1
position: 9721870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9721169-9721870:-1:exon

position:9721169:-1
position: 9721169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9717968-9718063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9714271-9714459:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9709636-9709698:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9709390-9709537:-1:exon

position:9709537:-1
position: 9709537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9703851-9703907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9697651-9697786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9690229-9692047:-1:exon

Ppil6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ppil6
product: peptidylprolyl isomerase like 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036169326.1
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(9690229..9692047,9697651..9697786,9703851..9703907,9709390..9709537,9709636..9709698,9714271..9714459,9717968..9718063,9721169..9721400,9721804..9721821))
location: region:9690229-9721821:-1
so has part: feature:9721804-9721821:-1:exon
so has part: feature:9721169-9721400:-1:exon
so has part: feature:9717968-9718063:-1:exon
so has part: feature:9714271-9714459:-1:exon
so has part: feature:9709636-9709698:-1:exon
so has part: feature:9709390-9709537:-1:exon
so has part: feature:9703851-9703907:-1:exon
so has part: feature:9697651-9697786:-1:exon
so has part: feature:9690229-9692047:-1:exon

position:9721821:-1
position: 9721821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9721804-9721821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9721169-9721400:-1:exon

position:9721400:-1
position: 9721400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9717968-9718063:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9714271-9714459:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9709636-9709698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9709390-9709537:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9703851-9703907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9697651-9697786:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9690229-9692047:-1:exon

Ppil6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ppil6
product: peptidylprolyl isomerase like 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169324.1
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(9691849..9692047,9697651..9697786,9703851..9703907,9709390..9709537,9709636..9709698,9714271..9714459,9717968..9718063,9721804..9722497))
location: region:9691849-9722497:-1
so has part: feature:9721804-9722497:-1:exon
so has part: feature:9717968-9718063:-1:exon
so has part: feature:9714271-9714459:-1:exon
so has part: feature:9709636-9709698:-1:exon
so has part: feature:9709390-9709537:-1:exon
so has part: feature:9703851-9703907:-1:exon
so has part: feature:9697651-9697786:-1:exon
so has part: feature:9691849-9692047:-1:exon

position:9691849:-1
position: 9691849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9721804-9722497:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9717968-9718063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9714271-9714459:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9709636-9709698:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9709390-9709537:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9703851-9703907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9697651-9697786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9691849-9692047:-1:exon

Ppil6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ppil6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable inactive peptidyl-prolyl cis-trans isomerase-like 6 isoform X3
translation: MAARQPCRPKPPPCPTKLPPEPPLRVKVVGLFKSSSFQVSKTIAETLKSNYPSRFEDPVIVPLQEFAWDQYLQEKKRDLKGETWVYSSYVMCFVNDQFLGNAFDLKKWAQKVWDVVDVRPSALYEALTLNYATKFLKDTKHDFVFLDICIDLSPIGRLIFEVLCTGMAGFSERGVKLHYKDSIFHRVVQNGWIQGGDIVEGKGDDGESIYGPTFEDENFSVPHDKRGILGMVNKGRHTNGSQFYITLQATPYLDKKYVAFGQLIEGTEVLQELELVPTENERPILLCSIADSGILYT
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(9691936..9692047,9697651..9697786,9703851..9703907,9709390..9709495,9709636..9709698,9714271..9714459,9717968..9718063,9721804..9721938))
location: region:9691936-9721938:-1
so has part: feature:9721804-9721938:-1:exon
so has part: feature:9717968-9718063:-1:exon
so has part: feature:9714271-9714459:-1:exon
so has part: feature:9709636-9709698:-1:exon
so has part: feature:9709390-9709495:-1:exon
so has part: feature:9703851-9703907:-1:exon
so has part: feature:9697651-9697786:-1:exon
so has part: feature:9691936-9692047:-1:exon

XP_036025220.1
type: Protein
SIO_000068: ncbiprotein

position:9691936:-1
position: 9691936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9721938:-1
position: 9721938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9721804-9721938:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9717968-9718063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9714271-9714459:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9709636-9709698:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9709390-9709495:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9703851-9703907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9697651-9697786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9691936-9692047:-1:exon

Ppil6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ppil6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable inactive peptidyl-prolyl cis-trans isomerase-like 6 isoform X1
translation: MAARQPCRPKPPPCPTKLPPEPPLRVKVVGLFKSSSFQVSKTIAETLKSNYPSRFEDPVIVPLQEFAWDQYLQEKKRDLKGETWVYSSYVMCFVNDQFLGNAFDLKKWAQKVWDVVDVRPSALYEALTLNYATKFLKDTKHDFVFLDICIDLSPIGRLIFELFCDTCPKTCKNFQVLCTGMAGFSERGVKLHYKDSIFHRVVQNGWIQGGDIVEGKGDDGESIYGPTFEDENFSVPHDKRGILGMVNKGRHTNGSQFYITLQATPYLDKKYVAFGQLIEGTEVLQELELVPTENERPILLCSIADSGILYT
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(9691936..9692047,9697651..9697786,9703851..9703907,9709390..9709537,9709636..9709698,9714271..9714459,9717968..9718063,9721804..9721938))
location: region:9691936-9721938:-1
so has part: feature:9721804-9721938:-1:exon
so has part: feature:9717968-9718063:-1:exon
so has part: feature:9714271-9714459:-1:exon
so has part: feature:9709636-9709698:-1:exon
so has part: feature:9709390-9709537:-1:exon
so has part: feature:9703851-9703907:-1:exon
so has part: feature:9697651-9697786:-1:exon
so has part: feature:9691936-9692047:-1:exon

XP_036025217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9721804-9721938:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9717968-9718063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9714271-9714459:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9709636-9709698:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9709390-9709537:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9703851-9703907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9697651-9697786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9691936-9692047:-1:exon

Ppil6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ppil6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable inactive peptidyl-prolyl cis-trans isomerase-like 6 isoform X2
translation: MLQHTRNLKAGGRGSSMVKHTQLRPRDLPFVLVFPDCPVGCKDSQTLKSNYPSRFEDPVIVPLQEFAWDQYLQEKKRDLKGETWVYSSYVMCFVNDQFLGNAFDLKKWAQKVWDVVDVRPSALYEALTLNYATKFLKDTKHDFVFLDICIDLSPIGRLIFELFCDTCPKTCKNFQVLCTGMAGFSERGVKLHYKDSIFHRVVQNGWIQGGDIVEGKGDDGESIYGPTFEDENFSVPHDKRGILGMVNKGRHTNGSQFYITLQATPYLDKKYVAFGQLIEGTEVLQELELVPTENERPILLCSIADSGILYT
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(9691936..9692047,9697651..9697786,9703851..9703907,9709390..9709537,9709636..9709698,9714271..9714459,9717968..9718063,9721169..9721303))
location: region:9691936-9721303:-1
so has part: feature:9721169-9721303:-1:exon
so has part: feature:9717968-9718063:-1:exon
so has part: feature:9714271-9714459:-1:exon
so has part: feature:9709636-9709698:-1:exon
so has part: feature:9709390-9709537:-1:exon
so has part: feature:9703851-9703907:-1:exon
so has part: feature:9697651-9697786:-1:exon
so has part: feature:9691936-9692047:-1:exon

XP_036025218.1
type: Protein
SIO_000068: ncbiprotein

position:9721303:-1
position: 9721303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9721169-9721303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9717968-9718063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9714271-9714459:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9709636-9709698:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9709390-9709537:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9703851-9703907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9697651-9697786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9691936-9692047:-1:exon

Ppil6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ppil6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable inactive peptidyl-prolyl cis-trans isomerase-like 6 isoform X2
translation: MLQHTRNLKAGGRGSSMVKHTQLRPRDLPFVLVFPDCPVGCKDSQTLKSNYPSRFEDPVIVPLQEFAWDQYLQEKKRDLKGETWVYSSYVMCFVNDQFLGNAFDLKKWAQKVWDVVDVRPSALYEALTLNYATKFLKDTKHDFVFLDICIDLSPIGRLIFELFCDTCPKTCKNFQVLCTGMAGFSERGVKLHYKDSIFHRVVQNGWIQGGDIVEGKGDDGESIYGPTFEDENFSVPHDKRGILGMVNKGRHTNGSQFYITLQATPYLDKKYVAFGQLIEGTEVLQELELVPTENERPILLCSIADSGILYT
SIO_010081: Ppil6
subclass of: SO_0000673
so part of: Ppil6
location: complement(join(9691936..9692047,9697651..9697786,9703851..9703907,9709390..9709537,9709636..9709698,9714271..9714459,9717968..9718063,9721169..9721303))
location: region:9691936-9721303:-1
so has part: feature:9721169-9721303:-1:exon
so has part: feature:9717968-9718063:-1:exon
so has part: feature:9714271-9714459:-1:exon
so has part: feature:9709636-9709698:-1:exon
so has part: feature:9709390-9709537:-1:exon
so has part: feature:9703851-9703907:-1:exon
so has part: feature:9697651-9697786:-1:exon
so has part: feature:9691936-9692047:-1:exon

XP_036025219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9721169-9721303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9717968-9718063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9714271-9714459:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9709636-9709698:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9709390-9709537:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9703851-9703907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9697651-9697786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9691936-9692047:-1:exon

Smpd2
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Smpd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9721655..9725219
location: region:9721655-9725219:1
so has part: feature:9721655-9725219:1:exon
subclass of: SO_0000010

118570659
type: Gene
SIO_000068: ncbigene

position:9721655:1
position: 9721655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9725219:1
position: 9725219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9721655-9725219:1:exon

Smpd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Smpd2
product: sphingomyelin phosphodiesterase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_036169323.1
SIO_010081: Smpd2
subclass of: SO_0000673
so part of: Smpd2
location: join(9721655..9722433,9722861..9722957,9723062..9723138,9723424..9723481,9723586..9723675,9723870..9723952,9724069..9724201,9724285..9724389,9724593..9724746,9724841..9725219)
location: region:9721655-9725219:1
so has part: feature:9721655-9722433:1:exon
so has part: feature:9722861-9722957:1:exon
so has part: feature:9723062-9723138:1:exon
so has part: feature:9723424-9723481:1:exon
so has part: feature:9723586-9723675:1:exon
so has part: feature:9723870-9723952:1:exon
so has part: feature:9724069-9724201:1:exon
so has part: feature:9724285-9724389:1:exon
so has part: feature:9724593-9724746:1:exon
so has part: feature:9724841-9725219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9721655-9722433:1:exon

position:9722433:1
position: 9722433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9722861-9722957:1:exon

position:9722861:1
position: 9722861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9722957:1
position: 9722957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9723062-9723138:1:exon

position:9723062:1
position: 9723062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9723138:1
position: 9723138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9723424-9723481:1:exon

position:9723424:1
position: 9723424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9723481:1
position: 9723481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9723586-9723675:1:exon

position:9723586:1
position: 9723586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9723675:1
position: 9723675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9723870-9723952:1:exon

position:9723870:1
position: 9723870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9723952:1
position: 9723952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9724069-9724201:1:exon

position:9724069:1
position: 9724069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9724201:1
position: 9724201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9724285-9724389:1:exon

position:9724285:1
position: 9724285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9724389:1
position: 9724389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9724593-9724746:1:exon

position:9724593:1
position: 9724593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9724746:1
position: 9724746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9724841-9725219:1:exon

position:9724841:1
position: 9724841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Smpd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Smpd2
product: sphingomyelin phosphodiesterase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169322.1
SIO_010081: Smpd2
subclass of: SO_0000673
so part of: Smpd2
location: join(9721657..9722433,9722861..9722957,9723062..9723138,9723388..9723481,9723586..9723675,9723870..9723952,9724069..9724201,9724285..9724389,9724593..9724746,9724841..9725219)
location: region:9721657-9725219:1
so has part: feature:9721657-9722433:1:exon
so has part: feature:9722861-9722957:1:exon
so has part: feature:9723062-9723138:1:exon
so has part: feature:9723388-9723481:1:exon
so has part: feature:9723586-9723675:1:exon
so has part: feature:9723870-9723952:1:exon
so has part: feature:9724069-9724201:1:exon
so has part: feature:9724285-9724389:1:exon
so has part: feature:9724593-9724746:1:exon
so has part: feature:9724841-9725219:1:exon

position:9721657:1
position: 9721657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9721657-9722433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9722861-9722957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9723062-9723138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9723388-9723481:1:exon

position:9723388:1
position: 9723388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9723586-9723675:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9723870-9723952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9724069-9724201:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9724285-9724389:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9724593-9724746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9724841-9725219:1:exon

Smpd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Smpd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingomyelin phosphodiesterase 2 isoform X1
translation: MKPTFSVRLRVFNLNCWDIPYLSKHRADRMKRLGDFLNLESFDLALLQEVWSEQDFQYLRQKLSLTYPDAHYFRSGIIGSGLCVFSRHPIQELIQHVYTLNGYPYMVCHGDWFCGKAVGLLVLHLNGLVLNVYVTHLHAEYSRQKDIYLAHRVVQAWELAQFIHHTSKNADVVLLCGDLNMHPKDLGCCLLKEWTGLRDAYVETQDFKGSEDGCTMVPTNCYVSQQDLGPFPHGIRIDYVLYKAVSGFYIYCKTLKTTTGCDPRNGTPLSDHEALMATLYVKHSPPQEDPSPAHGPSERSALISVLREAWTELGLGVAQARWWAAFAGCVTVWGLFLLVLLCVLAVGGGAREVAIMLWTPSVGLVLGAGAVCIFHRQEARGLCRAQAELQHVLRRERETQDLGSEPHLAPS
SIO_010081: Smpd2
subclass of: SO_0000673
so part of: Smpd2
location: join(9722384..9722433,9722861..9722957,9723062..9723138,9723388..9723481,9723586..9723675,9723870..9723952,9724069..9724201,9724285..9724389,9724593..9724746,9724841..9725193)
location: region:9722384-9725193:1
so has part: feature:9722384-9722433:1:exon
so has part: feature:9722861-9722957:1:exon
so has part: feature:9723062-9723138:1:exon
so has part: feature:9723388-9723481:1:exon
so has part: feature:9723586-9723675:1:exon
so has part: feature:9723870-9723952:1:exon
so has part: feature:9724069-9724201:1:exon
so has part: feature:9724285-9724389:1:exon
so has part: feature:9724593-9724746:1:exon
so has part: feature:9724841-9725193:1:exon

XP_036025215.1
type: Protein
SIO_000068: ncbiprotein

position:9722384:1
position: 9722384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9725193:1
position: 9725193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9722384-9722433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9722861-9722957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9723062-9723138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9723388-9723481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9723586-9723675:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9723870-9723952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9724069-9724201:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9724285-9724389:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9724593-9724746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9724841-9725193:1:exon

Smpd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Smpd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingomyelin phosphodiesterase 2 isoform X2
translation: MKPTFSVRLRVFNLNCWDIPYLSKHRADRMKRLGDFLNLESFDLALLQEVWSEQDFQYLRQKLSLTYPDAHYFRRHPIQELIQHVYTLNGYPYMVCHGDWFCGKAVGLLVLHLNGLVLNVYVTHLHAEYSRQKDIYLAHRVVQAWELAQFIHHTSKNADVVLLCGDLNMHPKDLGCCLLKEWTGLRDAYVETQDFKGSEDGCTMVPTNCYVSQQDLGPFPHGIRIDYVLYKAVSGFYIYCKTLKTTTGCDPRNGTPLSDHEALMATLYVKHSPPQEDPSPAHGPSERSALISVLREAWTELGLGVAQARWWAAFAGCVTVWGLFLLVLLCVLAVGGGAREVAIMLWTPSVGLVLGAGAVCIFHRQEARGLCRAQAELQHVLRRERETQDLGSEPHLAPS
SIO_010081: Smpd2
subclass of: SO_0000673
so part of: Smpd2
location: join(9722384..9722433,9722861..9722957,9723062..9723138,9723424..9723481,9723586..9723675,9723870..9723952,9724069..9724201,9724285..9724389,9724593..9724746,9724841..9725193)
location: region:9722384-9725193:1
so has part: feature:9722384-9722433:1:exon
so has part: feature:9722861-9722957:1:exon
so has part: feature:9723062-9723138:1:exon
so has part: feature:9723424-9723481:1:exon
so has part: feature:9723586-9723675:1:exon
so has part: feature:9723870-9723952:1:exon
so has part: feature:9724069-9724201:1:exon
so has part: feature:9724285-9724389:1:exon
so has part: feature:9724593-9724746:1:exon
so has part: feature:9724841-9725193:1:exon

XP_036025216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9722384-9722433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9722861-9722957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9723062-9723138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9723424-9723481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9723586-9723675:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9723870-9723952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9724069-9724201:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9724285-9724389:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9724593-9724746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9724841-9725193:1:exon

Mical1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Mical1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9725346..9736446)
location: region:9725346-9736446:-1
so has part: feature:9725346-9736446:-1:exon
subclass of: SO_0000010

118570658
type: Gene
SIO_000068: ncbigene

position:9725346:-1
position: 9725346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9736446:-1
position: 9736446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9725346-9736446:-1:exon

Mical1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Mical1
product: microtubule associated monooxygenase, calponin and LIM domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036169319.1
SIO_010081: Mical1
subclass of: SO_0000673
so part of: Mical1
location: complement(join(9725346..9725632,9725925..9725998,9726097..9726196,9726366..9726459,9726578..9726691,9726915..9727054,9727193..9727472,9727662..9727738,9727971..9728127,9728247..9728330,9728672..9728760,9728839..9729041,9729839..9729983,9730552..9730633,9730803..9730929,9731115..9731230,9731442..9731699,9732394..9732494,9733033..9733188,9733304..9733408,9733724..9733828,9734140..9734347,9734437..9734737,9735802..9735930,9736246..9736446))
location: region:9725346-9736446:-1
so has part: feature:9736246-9736446:-1:exon
so has part: feature:9735802-9735930:-1:exon
so has part: feature:9734437-9734737:-1:exon
so has part: feature:9734140-9734347:-1:exon
so has part: feature:9733724-9733828:-1:exon
so has part: feature:9733304-9733408:-1:exon
so has part: feature:9733033-9733188:-1:exon
so has part: feature:9732394-9732494:-1:exon
so has part: feature:9731442-9731699:-1:exon
so has part: feature:9731115-9731230:-1:exon
so has part: feature:9730803-9730929:-1:exon
so has part: feature:9730552-9730633:-1:exon
so has part: feature:9729839-9729983:-1:exon
so has part: feature:9728839-9729041:-1:exon
so has part: feature:9728672-9728760:-1:exon
so has part: feature:9728247-9728330:-1:exon
so has part: feature:9727971-9728127:-1:exon
so has part: feature:9727662-9727738:-1:exon
so has part: feature:9727193-9727472:-1:exon
so has part: feature:9726915-9727054:-1:exon
so has part: feature:9726578-9726691:-1:exon
so has part: feature:9726366-9726459:-1:exon
so has part: feature:9726097-9726196:-1:exon
so has part: feature:9725925-9725998:-1:exon
so has part: feature:9725346-9725632:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9736246-9736446:-1:exon

position:9736246:-1
position: 9736246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9735802-9735930:-1:exon

position:9735802:-1
position: 9735802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9735930:-1
position: 9735930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9734437-9734737:-1:exon

position:9734437:-1
position: 9734437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9734737:-1
position: 9734737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9734140-9734347:-1:exon

position:9734140:-1
position: 9734140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9734347:-1
position: 9734347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9733724-9733828:-1:exon

position:9733724:-1
position: 9733724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9733828:-1
position: 9733828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9733304-9733408:-1:exon

position:9733304:-1
position: 9733304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9733408:-1
position: 9733408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9733033-9733188:-1:exon

position:9733033:-1
position: 9733033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9733188:-1
position: 9733188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9732394-9732494:-1:exon

position:9732394:-1
position: 9732394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9732494:-1
position: 9732494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9731442-9731699:-1:exon

position:9731442:-1
position: 9731442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9731699:-1
position: 9731699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9731115-9731230:-1:exon

position:9731115:-1
position: 9731115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9731230:-1
position: 9731230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9730803-9730929:-1:exon

position:9730803:-1
position: 9730803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9730929:-1
position: 9730929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9730552-9730633:-1:exon

position:9730552:-1
position: 9730552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9730633:-1
position: 9730633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9729839-9729983:-1:exon

position:9729839:-1
position: 9729839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9729983:-1
position: 9729983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9728839-9729041:-1:exon

position:9728839:-1
position: 9728839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9729041:-1
position: 9729041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9728672-9728760:-1:exon

position:9728672:-1
position: 9728672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9728760:-1
position: 9728760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9728247-9728330:-1:exon

position:9728247:-1
position: 9728247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9728330:-1
position: 9728330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9727971-9728127:-1:exon

position:9727971:-1
position: 9727971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9728127:-1
position: 9728127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9727662-9727738:-1:exon

position:9727662:-1
position: 9727662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9727738:-1
position: 9727738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9727193-9727472:-1:exon

position:9727193:-1
position: 9727193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9727472:-1
position: 9727472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9726915-9727054:-1:exon

position:9726915:-1
position: 9726915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9727054:-1
position: 9727054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9726578-9726691:-1:exon

position:9726578:-1
position: 9726578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9726691:-1
position: 9726691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:9726366-9726459:-1:exon

position:9726366:-1
position: 9726366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9726459:-1
position: 9726459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:9726097-9726196:-1:exon

position:9726097:-1
position: 9726097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9726196:-1
position: 9726196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:9725925-9725998:-1:exon

position:9725925:-1
position: 9725925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9725998:-1
position: 9725998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:9725346-9725632:-1:exon

position:9725632:-1
position: 9725632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mical1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Mical1
product: microtubule associated monooxygenase, calponin and LIM domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169321.1
SIO_010081: Mical1
subclass of: SO_0000673
so part of: Mical1
location: complement(join(9725346..9725632,9725925..9725998,9726097..9726196,9726366..9726459,9726578..9726691,9726915..9727054,9727193..9727472,9727662..9727738,9727971..9728127,9728247..9728330,9728672..9728760,9728851..9729041,9729839..9729983,9730552..9730633,9730803..9730929,9731115..9731230,9731442..9731699,9732394..9732494,9733033..9733188,9733304..9733408,9733724..9733828,9734140..9734347,9734437..9734737,9736246..9736445))
location: region:9725346-9736445:-1
so has part: feature:9736246-9736445:-1:exon
so has part: feature:9734437-9734737:-1:exon
so has part: feature:9734140-9734347:-1:exon
so has part: feature:9733724-9733828:-1:exon
so has part: feature:9733304-9733408:-1:exon
so has part: feature:9733033-9733188:-1:exon
so has part: feature:9732394-9732494:-1:exon
so has part: feature:9731442-9731699:-1:exon
so has part: feature:9731115-9731230:-1:exon
so has part: feature:9730803-9730929:-1:exon
so has part: feature:9730552-9730633:-1:exon
so has part: feature:9729839-9729983:-1:exon
so has part: feature:9728851-9729041:-1:exon
so has part: feature:9728672-9728760:-1:exon
so has part: feature:9728247-9728330:-1:exon
so has part: feature:9727971-9728127:-1:exon
so has part: feature:9727662-9727738:-1:exon
so has part: feature:9727193-9727472:-1:exon
so has part: feature:9726915-9727054:-1:exon
so has part: feature:9726578-9726691:-1:exon
so has part: feature:9726366-9726459:-1:exon
so has part: feature:9726097-9726196:-1:exon
so has part: feature:9725925-9725998:-1:exon
so has part: feature:9725346-9725632:-1:exon

position:9736445:-1
position: 9736445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9736246-9736445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9734437-9734737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9734140-9734347:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9733724-9733828:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9733304-9733408:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9733033-9733188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9732394-9732494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9731442-9731699:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9731115-9731230:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9730803-9730929:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9730552-9730633:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9729839-9729983:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9728851-9729041:-1:exon

position:9728851:-1
position: 9728851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9728672-9728760:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9728247-9728330:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9727971-9728127:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9727662-9727738:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9727193-9727472:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9726915-9727054:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9726578-9726691:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9726366-9726459:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9726097-9726196:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9725925-9725998:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9725346-9725632:-1:exon

Mical1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Mical1
product: microtubule associated monooxygenase, calponin and LIM domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036169318.1
SIO_010081: Mical1
subclass of: SO_0000673
so part of: Mical1
location: complement(join(9725346..9725632,9725925..9725998,9726097..9726196,9726366..9726459,9726578..9726691,9726915..9727054,9727193..9727472,9727662..9727738,9727971..9728127,9728247..9728330,9728672..9728760,9728839..9729041,9729839..9729983,9730552..9730633,9730803..9730929,9731115..9731230,9731442..9731699,9732394..9732494,9733033..9733188,9733304..9733408,9733724..9733828,9734140..9734347,9734437..9734737,9736246..9736445))
location: region:9725346-9736445:-1
so has part: feature:9736246-9736445:-1:exon
so has part: feature:9734437-9734737:-1:exon
so has part: feature:9734140-9734347:-1:exon
so has part: feature:9733724-9733828:-1:exon
so has part: feature:9733304-9733408:-1:exon
so has part: feature:9733033-9733188:-1:exon
so has part: feature:9732394-9732494:-1:exon
so has part: feature:9731442-9731699:-1:exon
so has part: feature:9731115-9731230:-1:exon
so has part: feature:9730803-9730929:-1:exon
so has part: feature:9730552-9730633:-1:exon
so has part: feature:9729839-9729983:-1:exon
so has part: feature:9728839-9729041:-1:exon
so has part: feature:9728672-9728760:-1:exon
so has part: feature:9728247-9728330:-1:exon
so has part: feature:9727971-9728127:-1:exon
so has part: feature:9727662-9727738:-1:exon
so has part: feature:9727193-9727472:-1:exon
so has part: feature:9726915-9727054:-1:exon
so has part: feature:9726578-9726691:-1:exon
so has part: feature:9726366-9726459:-1:exon
so has part: feature:9726097-9726196:-1:exon
so has part: feature:9725925-9725998:-1:exon
so has part: feature:9725346-9725632:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9736246-9736445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9734437-9734737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9734140-9734347:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9733724-9733828:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9733304-9733408:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9733033-9733188:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9732394-9732494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9731442-9731699:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9731115-9731230:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9730803-9730929:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9730552-9730633:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9729839-9729983:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9728839-9729041:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9728672-9728760:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9728247-9728330:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9727971-9728127:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9727662-9727738:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9727193-9727472:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9726915-9727054:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9726578-9726691:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9726366-9726459:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9726097-9726196:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9725925-9725998:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9725346-9725632:-1:exon

Mical1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Mical1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-actin-monooxygenase MICAL1 isoform X2
translation: MASTASTNPAHAHFESFVQAQLCQDVLSSFQGLCEALGLEPGGGLPQYHKIKAQLNYWSAKSLWAKLDKRASQSVYQQGQACANTKCLVVGAGPCGLRAAVELALLGARVVLVEKRTKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGIAFTGLQPPPRKGSGWHAQLQPSPPAQLANYEFDVLISAAGGKFVPEGFTIREMRGKLAIGITVNFVNGRTVEETQVPEISGVARIYNQKFFQSLLKATGIDLENIVYYKDDTHYFVMTAKKQCLLRLGVLLQDLPETDQLLGRDNVVPEALQHFARAAADFATHGKLGKLEFAQDARGRPDVAAFDFTSMMRAESSARVQEKHGARLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMVKRWAEGARPLEVLAERESLYQLLSQTSPENMHRNVAQYGLDPATRYPNLNLRAVTPNQVQDLYDVMDKEHAQRKNDKTDAGKVTTGSAGTEELLYWCQERTAGFPGVHVTDFSSSWTDGLALCALVHRLQPGLLEPSELQGMGALEATSWALKVAQHELGITPVVSAQAVVAGSDPLGLIAYLSHFHSAFKNVPQSSSPVGQAPSGTPNAILFLGKLQRTLQRTRAKVEAETPSTEEPPVSEPSVPPALPSENQEAGAEDLCELCGKHLYILERFCVDGHFFHRDCFRCHACEATLWPGGYGQHLGDGHFYCLQHLPQEGQKEADRDGSPENQELPTPDDNSTQPGPPSPPVSPAKRVSPVPSPSQPTRRLIRLSSLERLRLSSLAIIPGPGTEPPPKPPRSCSALARQALEGSFMGWGVPVQAPQVPEATEKMEENPFSNEEEEEEEEEEEEEEEEEEEEEEEVPLEVDLEQTLLTLAKNSGAMTKYPTWYRTLMRRAKEEEMKRFCKAQAIQRRLNEIEAAVRELETEGTRLELALRSQSSSPEQQKKLWLDQLLQLIQEKNSLVTEEAELMITVQELDLEEKQWQLDQELRGYMNREETLKTEADRQSEDQILRKLLDVVNQRDALIRFQEERRLSEMASETGAQG
SIO_010081: Mical1
subclass of: SO_0000673
so part of: Mical1
location: complement(join(9725484..9725632,9725925..9725998,9726097..9726196,9726366..9726459,9726578..9726691,9726915..9727054,9727193..9727472,9727662..9727738,9727971..9728127,9728247..9728330,9728672..9728760,9728851..9729041,9729839..9729983,9730552..9730633,9730803..9730929,9731115..9731230,9731442..9731699,9732394..9732494,9733033..9733188,9733304..9733408,9733724..9733828,9734140..9734347,9734437..9734694))
location: region:9725484-9734694:-1
so has part: feature:9734437-9734694:-1:exon
so has part: feature:9734140-9734347:-1:exon
so has part: feature:9733724-9733828:-1:exon
so has part: feature:9733304-9733408:-1:exon
so has part: feature:9733033-9733188:-1:exon
so has part: feature:9732394-9732494:-1:exon
so has part: feature:9731442-9731699:-1:exon
so has part: feature:9731115-9731230:-1:exon
so has part: feature:9730803-9730929:-1:exon
so has part: feature:9730552-9730633:-1:exon
so has part: feature:9729839-9729983:-1:exon
so has part: feature:9728851-9729041:-1:exon
so has part: feature:9728672-9728760:-1:exon
so has part: feature:9728247-9728330:-1:exon
so has part: feature:9727971-9728127:-1:exon
so has part: feature:9727662-9727738:-1:exon
so has part: feature:9727193-9727472:-1:exon
so has part: feature:9726915-9727054:-1:exon
so has part: feature:9726578-9726691:-1:exon
so has part: feature:9726366-9726459:-1:exon
so has part: feature:9726097-9726196:-1:exon
so has part: feature:9725925-9725998:-1:exon
so has part: feature:9725484-9725632:-1:exon

XP_036025214.1
type: Protein
SIO_000068: ncbiprotein

position:9725484:-1
position: 9725484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9734694:-1
position: 9734694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9734437-9734694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9734140-9734347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9733724-9733828:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9733304-9733408:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9733033-9733188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9732394-9732494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9731442-9731699:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9731115-9731230:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9730803-9730929:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9730552-9730633:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9729839-9729983:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9728851-9729041:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9728672-9728760:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9728247-9728330:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9727971-9728127:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9727662-9727738:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9727193-9727472:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9726915-9727054:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9726578-9726691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9726366-9726459:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9726097-9726196:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9725925-9725998:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9725484-9725632:-1:exon

Mical1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Mical1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-actin-monooxygenase MICAL1 isoform X1
translation: MASTASTNPAHAHFESFVQAQLCQDVLSSFQGLCEALGLEPGGGLPQYHKIKAQLNYWSAKSLWAKLDKRASQSVYQQGQACANTKCLVVGAGPCGLRAAVELALLGARVVLVEKRTKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGIAFTGLQPPPRKGSGWHAQLQPSPPAQLANYEFDVLISAAGGKFVPEGFTIREMRGKLAIGITVNFVNGRTVEETQVPEISGVARIYNQKFFQSLLKATGIDLENIVYYKDDTHYFVMTAKKQCLLRLGVLLQDLPETDQLLGRDNVVPEALQHFARAAADFATHGKLGKLEFAQDARGRPDVAAFDFTSMMRAESSARVQEKHGARLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMVKRWAEGARPLEVLAERESLYQLLSQTSPENMHRNVAQYGLDPATRYPNLNLRAVTPNQVQDLYDVMDKEHAQRKNDKTDAGKVTTGSAGTEELLYWCQERTAGFPGVHVTDFSSSWTDGLALCALVHRLQPGLLEPSELQGMGALEATSWALKVAQHELGITPVVSAQAVVAGSDPLGLIAYLSHFHSAFKNVPQSSSELEGPVGQAPSGTPNAILFLGKLQRTLQRTRAKVEAETPSTEEPPVSEPSVPPALPSENQEAGAEDLCELCGKHLYILERFCVDGHFFHRDCFRCHACEATLWPGGYGQHLGDGHFYCLQHLPQEGQKEADRDGSPENQELPTPDDNSTQPGPPSPPVSPAKRVSPVPSPSQPTRRLIRLSSLERLRLSSLAIIPGPGTEPPPKPPRSCSALARQALEGSFMGWGVPVQAPQVPEATEKMEENPFSNEEEEEEEEEEEEEEEEEEEEEEEVPLEVDLEQTLLTLAKNSGAMTKYPTWYRTLMRRAKEEEMKRFCKAQAIQRRLNEIEAAVRELETEGTRLELALRSQSSSPEQQKKLWLDQLLQLIQEKNSLVTEEAELMITVQELDLEEKQWQLDQELRGYMNREETLKTEADRQSEDQILRKLLDVVNQRDALIRFQEERRLSEMASETGAQG
SIO_010081: Mical1
subclass of: SO_0000673
so part of: Mical1
location: complement(join(9725484..9725632,9725925..9725998,9726097..9726196,9726366..9726459,9726578..9726691,9726915..9727054,9727193..9727472,9727662..9727738,9727971..9728127,9728247..9728330,9728672..9728760,9728839..9729041,9729839..9729983,9730552..9730633,9730803..9730929,9731115..9731230,9731442..9731699,9732394..9732494,9733033..9733188,9733304..9733408,9733724..9733828,9734140..9734347,9734437..9734694))
location: region:9725484-9734694:-1
so has part: feature:9734437-9734694:-1:exon
so has part: feature:9734140-9734347:-1:exon
so has part: feature:9733724-9733828:-1:exon
so has part: feature:9733304-9733408:-1:exon
so has part: feature:9733033-9733188:-1:exon
so has part: feature:9732394-9732494:-1:exon
so has part: feature:9731442-9731699:-1:exon
so has part: feature:9731115-9731230:-1:exon
so has part: feature:9730803-9730929:-1:exon
so has part: feature:9730552-9730633:-1:exon
so has part: feature:9729839-9729983:-1:exon
so has part: feature:9728839-9729041:-1:exon
so has part: feature:9728672-9728760:-1:exon
so has part: feature:9728247-9728330:-1:exon
so has part: feature:9727971-9728127:-1:exon
so has part: feature:9727662-9727738:-1:exon
so has part: feature:9727193-9727472:-1:exon
so has part: feature:9726915-9727054:-1:exon
so has part: feature:9726578-9726691:-1:exon
so has part: feature:9726366-9726459:-1:exon
so has part: feature:9726097-9726196:-1:exon
so has part: feature:9725925-9725998:-1:exon
so has part: feature:9725484-9725632:-1:exon

XP_036025211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9734437-9734694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9734140-9734347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9733724-9733828:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9733304-9733408:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9733033-9733188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9732394-9732494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9731442-9731699:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9731115-9731230:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9730803-9730929:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9730552-9730633:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9729839-9729983:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9728839-9729041:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9728672-9728760:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9728247-9728330:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9727971-9728127:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9727662-9727738:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9727193-9727472:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9726915-9727054:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9726578-9726691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9726366-9726459:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9726097-9726196:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9725925-9725998:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9725484-9725632:-1:exon

Mical1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Mical1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-actin-monooxygenase MICAL1 isoform X1
translation: MASTASTNPAHAHFESFVQAQLCQDVLSSFQGLCEALGLEPGGGLPQYHKIKAQLNYWSAKSLWAKLDKRASQSVYQQGQACANTKCLVVGAGPCGLRAAVELALLGARVVLVEKRTKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGIAFTGLQPPPRKGSGWHAQLQPSPPAQLANYEFDVLISAAGGKFVPEGFTIREMRGKLAIGITVNFVNGRTVEETQVPEISGVARIYNQKFFQSLLKATGIDLENIVYYKDDTHYFVMTAKKQCLLRLGVLLQDLPETDQLLGRDNVVPEALQHFARAAADFATHGKLGKLEFAQDARGRPDVAAFDFTSMMRAESSARVQEKHGARLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMVKRWAEGARPLEVLAERESLYQLLSQTSPENMHRNVAQYGLDPATRYPNLNLRAVTPNQVQDLYDVMDKEHAQRKNDKTDAGKVTTGSAGTEELLYWCQERTAGFPGVHVTDFSSSWTDGLALCALVHRLQPGLLEPSELQGMGALEATSWALKVAQHELGITPVVSAQAVVAGSDPLGLIAYLSHFHSAFKNVPQSSSELEGPVGQAPSGTPNAILFLGKLQRTLQRTRAKVEAETPSTEEPPVSEPSVPPALPSENQEAGAEDLCELCGKHLYILERFCVDGHFFHRDCFRCHACEATLWPGGYGQHLGDGHFYCLQHLPQEGQKEADRDGSPENQELPTPDDNSTQPGPPSPPVSPAKRVSPVPSPSQPTRRLIRLSSLERLRLSSLAIIPGPGTEPPPKPPRSCSALARQALEGSFMGWGVPVQAPQVPEATEKMEENPFSNEEEEEEEEEEEEEEEEEEEEEEEVPLEVDLEQTLLTLAKNSGAMTKYPTWYRTLMRRAKEEEMKRFCKAQAIQRRLNEIEAAVRELETEGTRLELALRSQSSSPEQQKKLWLDQLLQLIQEKNSLVTEEAELMITVQELDLEEKQWQLDQELRGYMNREETLKTEADRQSEDQILRKLLDVVNQRDALIRFQEERRLSEMASETGAQG
SIO_010081: Mical1
subclass of: SO_0000673
so part of: Mical1
location: complement(join(9725484..9725632,9725925..9725998,9726097..9726196,9726366..9726459,9726578..9726691,9726915..9727054,9727193..9727472,9727662..9727738,9727971..9728127,9728247..9728330,9728672..9728760,9728839..9729041,9729839..9729983,9730552..9730633,9730803..9730929,9731115..9731230,9731442..9731699,9732394..9732494,9733033..9733188,9733304..9733408,9733724..9733828,9734140..9734347,9734437..9734694))
location: region:9725484-9734694:-1
so has part: feature:9734437-9734694:-1:exon
so has part: feature:9734140-9734347:-1:exon
so has part: feature:9733724-9733828:-1:exon
so has part: feature:9733304-9733408:-1:exon
so has part: feature:9733033-9733188:-1:exon
so has part: feature:9732394-9732494:-1:exon
so has part: feature:9731442-9731699:-1:exon
so has part: feature:9731115-9731230:-1:exon
so has part: feature:9730803-9730929:-1:exon
so has part: feature:9730552-9730633:-1:exon
so has part: feature:9729839-9729983:-1:exon
so has part: feature:9728839-9729041:-1:exon
so has part: feature:9728672-9728760:-1:exon
so has part: feature:9728247-9728330:-1:exon
so has part: feature:9727971-9728127:-1:exon
so has part: feature:9727662-9727738:-1:exon
so has part: feature:9727193-9727472:-1:exon
so has part: feature:9726915-9727054:-1:exon
so has part: feature:9726578-9726691:-1:exon
so has part: feature:9726366-9726459:-1:exon
so has part: feature:9726097-9726196:-1:exon
so has part: feature:9725925-9725998:-1:exon
so has part: feature:9725484-9725632:-1:exon

XP_036025212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9734437-9734694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9734140-9734347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9733724-9733828:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9733304-9733408:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9733033-9733188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9732394-9732494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9731442-9731699:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9731115-9731230:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9730803-9730929:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9730552-9730633:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9729839-9729983:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9728839-9729041:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9728672-9728760:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9728247-9728330:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9727971-9728127:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9727662-9727738:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9727193-9727472:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9726915-9727054:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9726578-9726691:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9726366-9726459:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9726097-9726196:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9725925-9725998:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9725484-9725632:-1:exon

Zbtb24
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Zbtb24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9746103..9761152)
location: region:9746103-9761152:-1
so has part: feature:9746103-9761152:-1:exon
subclass of: SO_0000010

118570633
type: Gene
SIO_000068: ncbigene

position:9746103:-1
position: 9746103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9761152:-1
position: 9761152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9746103-9761152:-1:exon

Zbtb24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Zbtb24
product: zinc finger and BTB domain containing 24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_036169308.1
SIO_010081: Zbtb24
subclass of: SO_0000673
so part of: Zbtb24
location: complement(join(9746103..9747049,9748524..9748605,9755426..9755509,9756328..9756411,9756889..9757056,9759546..9760522,9761034..9761152))
location: region:9746103-9761152:-1
so has part: feature:9761034-9761152:-1:exon
so has part: feature:9759546-9760522:-1:exon
so has part: feature:9756889-9757056:-1:exon
so has part: feature:9756328-9756411:-1:exon
so has part: feature:9755426-9755509:-1:exon
so has part: feature:9748524-9748605:-1:exon
so has part: feature:9746103-9747049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9761034-9761152:-1:exon

position:9761034:-1
position: 9761034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9759546-9760522:-1:exon

position:9759546:-1
position: 9759546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9760522:-1
position: 9760522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9756889-9757056:-1:exon

position:9756889:-1
position: 9756889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9757056:-1
position: 9757056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9756328-9756411:-1:exon

position:9756328:-1
position: 9756328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9756411:-1
position: 9756411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9755426-9755509:-1:exon

position:9755426:-1
position: 9755426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9755509:-1
position: 9755509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9748524-9748605:-1:exon

position:9748524:-1
position: 9748524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9748605:-1
position: 9748605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9746103-9747049:-1:exon

position:9747049:-1
position: 9747049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Zbtb24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Zbtb24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 24
translation: MAETAAEPSGQLVVHSDTHSHTVLASLEEQRKRGFLCDITLIVENVHFRAHKALLAASSEYFSMMFAEEGEIGQSIYMLEGMVADTFGILLEFIYTGYLQASEKTAEQILATAQFLKVYDLIKAYTDFQTKHSSPEPPALNGTGTPVVVISNKKNDPLKRKRGRPRKGSSVQEGKSELATEEEMQLRVNNSVQNRQNFVVKEGDGVELNAQIPKEKASEPAGEPGRVEEMLAEKDENCDPTVRDGQDSLSRYSKRRIRRSVKLKDYKLLGDEDDQGSAQRICGEKKRSSGPEARCKDCGKVFKYSHFLAIHQRRHTGERPFKCGECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALTTKHSLLEHMSLHSGQKSFTCDQCGKYFSQKRQLKSHYRVHTGHSLPECNHCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTAKSSLQTHIRIHRGEKPYSCSICGKSFSDSSAKRRHCILHTGKKPFSCPECSLQFARLDNLKAHLKIHNKEKHTADSCSSSGSSAEEVRNILQLQPYQLSTSGEQEIQLLVTDSVHNINFMPGPSQGVSLVAADSSQNMATDPAANLALLTQQPEQLQSLLLSAQQEQTEHIQSLSMIGSQMESSQPEPVHVITLSKETLEHLQAQQQGQTEALRLAAGADPAQHLQLTRDPDPPLPTPLGQEQS
SIO_010081: Zbtb24
subclass of: SO_0000673
so part of: Zbtb24
location: complement(join(9746350..9747049,9748524..9748605,9755426..9755509,9756328..9756411,9756889..9757056,9759546..9760494))
location: region:9746350-9760494:-1
so has part: feature:9759546-9760494:-1:exon
so has part: feature:9756889-9757056:-1:exon
so has part: feature:9756328-9756411:-1:exon
so has part: feature:9755426-9755509:-1:exon
so has part: feature:9748524-9748605:-1:exon
so has part: feature:9746350-9747049:-1:exon

XP_036025201.1
type: Protein
SIO_000068: ncbiprotein

position:9746350:-1
position: 9746350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9760494:-1
position: 9760494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9759546-9760494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9756889-9757056:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9756328-9756411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9755426-9755509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9748524-9748605:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9746350-9747049:-1:exon

LOC118570661
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9784877..9802931)
location: region:9784877-9802931:-1
so has part: feature:9784877-9802931:-1:exon
subclass of: SO_0000010

118570661
type: Gene
SIO_000068: ncbigene

position:9784877:-1
position: 9784877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9802931:-1
position: 9802931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9784877-9802931:-1:exon

LOC118570661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118570661
product: adenylate kinase 9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036169328.1
SIO_010081: LOC118570661
subclass of: SO_0000673
so part of: LOC118570661
location: complement(join(9784877..9785195,9787540..9787800,9790645..9790857,9796119..9796240,9796526..9796729,9799932..9800009,9801889..9802065,9802904..9802931))
location: region:9784877-9802931:-1
so has part: feature:9802904-9802931:-1:exon
so has part: feature:9801889-9802065:-1:exon
so has part: feature:9799932-9800009:-1:exon
so has part: feature:9796526-9796729:-1:exon
so has part: feature:9796119-9796240:-1:exon
so has part: feature:9790645-9790857:-1:exon
so has part: feature:9787540-9787800:-1:exon
so has part: feature:9784877-9785195:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9802904-9802931:-1:exon

position:9802904:-1
position: 9802904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9801889-9802065:-1:exon

position:9801889:-1
position: 9801889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9802065:-1
position: 9802065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9799932-9800009:-1:exon

position:9799932:-1
position: 9799932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9800009:-1
position: 9800009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9796526-9796729:-1:exon

position:9796526:-1
position: 9796526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9796729:-1
position: 9796729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9796119-9796240:-1:exon

position:9796119:-1
position: 9796119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9796240:-1
position: 9796240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9790645-9790857:-1:exon

position:9790645:-1
position: 9790645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9790857:-1
position: 9790857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9787540-9787800:-1:exon

position:9787540:-1
position: 9787540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9787800:-1
position: 9787800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9784877-9785195:-1:exon

position:9785195:-1
position: 9785195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118570661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118570661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate kinase 9-like
translation: MWHLEENWKDGEEADNEADEEVDGEDSEVHDAPEESETPEIQENTRGSLLPEESEALEVPEAEHEPEAAPPAAAHLLAQAPFLPCRHWRIGRAGEAVLPEFPEDAYPNVPEMEPLKEELNNYLLMWKHLEQMITENLIQILTLDISNKTPKELLQKVVETMEKPFQYAAWELNAEDYDEEAEDYQAEVEIDEEQEEEEEEEEEGEEKIKEKRRHLGDTKHFCPVVLKENFILQPGNTEEAVKYREKIYYFSTAEAKEKFLEHPEDYVAQNEPLKAPPIRMCLLGPRGSGKTTCARKLAENFGVFHIQFDEFLQEKLLLKAERKFGPEFEDDSDEEQATKQELEELAVQANVKIEEESTKKPILDVQFTEEEEAIKLSLMENEALPSEILDPILSEWWLKEPIRCLHTLGSVSYWVSLLCS
SIO_010081: LOC118570661
subclass of: SO_0000673
so part of: LOC118570661
location: complement(join(9785016..9785195,9787540..9787800,9790645..9790857,9796119..9796240,9796526..9796729,9799932..9800009,9801889..9802065,9802904..9802931))
location: region:9785016-9802931:-1
so has part: feature:9802904-9802931:-1:exon
so has part: feature:9801889-9802065:-1:exon
so has part: feature:9799932-9800009:-1:exon
so has part: feature:9796526-9796729:-1:exon
so has part: feature:9796119-9796240:-1:exon
so has part: feature:9790645-9790857:-1:exon
so has part: feature:9787540-9787800:-1:exon
so has part: feature:9785016-9785195:-1:exon

XP_036025221.1
type: Protein
SIO_000068: ncbiprotein

position:9785016:-1
position: 9785016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9802904-9802931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9801889-9802065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9799932-9800009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9796526-9796729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9796119-9796240:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9790645-9790857:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9787540-9787800:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9785016-9785195:-1:exon

LOC118570707
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9810834..9882339)
location: region:9810834-9882339:-1
so has part: feature:9810834-9882339:-1:exon
subclass of: SO_0000010

118570707
type: Gene
SIO_000068: ncbigene

position:9810834:-1
position: 9810834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9882339:-1
position: 9882339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9810834-9882339:-1:exon

LOC118570707
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118570707
product: adenylate kinase 9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036169365.1
SIO_010081: LOC118570707
subclass of: SO_0000673
so part of: LOC118570707
location: complement(join(9810834..9811046,9812917..9813073,9816936..9817084,9823250..9823345,9823432..9823545,9826735..9826879,9837066..9837246,9837326..9837465,9842183..9842281,9843613..9843687,9845309..9845437,9866050..9866235,9869637..9869749,9872286..9872382,9872482..9872534,9874821..9874884,9876263..9876390,9881712..9882339))
location: region:9810834-9882339:-1
so has part: feature:9881712-9882339:-1:exon
so has part: feature:9876263-9876390:-1:exon
so has part: feature:9874821-9874884:-1:exon
so has part: feature:9872482-9872534:-1:exon
so has part: feature:9872286-9872382:-1:exon
so has part: feature:9869637-9869749:-1:exon
so has part: feature:9866050-9866235:-1:exon
so has part: feature:9845309-9845437:-1:exon
so has part: feature:9843613-9843687:-1:exon
so has part: feature:9842183-9842281:-1:exon
so has part: feature:9837326-9837465:-1:exon
so has part: feature:9837066-9837246:-1:exon
so has part: feature:9826735-9826879:-1:exon
so has part: feature:9823432-9823545:-1:exon
so has part: feature:9823250-9823345:-1:exon
so has part: feature:9816936-9817084:-1:exon
so has part: feature:9812917-9813073:-1:exon
so has part: feature:9810834-9811046:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9881712-9882339:-1:exon

position:9881712:-1
position: 9881712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9876263-9876390:-1:exon

position:9876263:-1
position: 9876263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9876390:-1
position: 9876390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9874821-9874884:-1:exon

position:9874821:-1
position: 9874821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9874884:-1
position: 9874884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9872482-9872534:-1:exon

position:9872482:-1
position: 9872482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9872534:-1
position: 9872534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9872286-9872382:-1:exon

position:9872286:-1
position: 9872286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9872382:-1
position: 9872382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9869637-9869749:-1:exon

position:9869637:-1
position: 9869637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9869749:-1
position: 9869749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9866050-9866235:-1:exon

position:9866050:-1
position: 9866050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9866235:-1
position: 9866235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9845309-9845437:-1:exon

position:9845309:-1
position: 9845309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9845437:-1
position: 9845437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9843613-9843687:-1:exon

position:9843613:-1
position: 9843613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9843687:-1
position: 9843687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9842183-9842281:-1:exon

position:9842183:-1
position: 9842183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9842281:-1
position: 9842281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9837326-9837465:-1:exon

position:9837326:-1
position: 9837326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9837465:-1
position: 9837465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9837066-9837246:-1:exon

position:9837066:-1
position: 9837066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9837246:-1
position: 9837246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9826735-9826879:-1:exon

position:9826735:-1
position: 9826735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9826879:-1
position: 9826879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9823432-9823545:-1:exon

position:9823432:-1
position: 9823432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9823545:-1
position: 9823545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9823250-9823345:-1:exon

position:9823250:-1
position: 9823250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9823345:-1
position: 9823345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9816936-9817084:-1:exon

position:9816936:-1
position: 9816936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9817084:-1
position: 9817084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9812917-9813073:-1:exon

position:9812917:-1
position: 9812917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9813073:-1
position: 9813073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9810834-9811046:-1:exon

position:9811046:-1
position: 9811046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118570707
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118570707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate kinase 9-like
translation: MASAEKTEEYPFADIFNEDETERNFLLSKPTCFIIFGKPGSGKTTLARNIAQAWKCIRVEALSVLEEIIATETEMGTTLQSMLVSGHSIPDELVMKLILEKLKSPEVSHFGYIITEIPTLAQDNMTTLNQVELVKNLDLQPDVIINIKCGDYDLCQRISGQRQHSSTGYIYSRDQWDPEIIESRRRRKKESPKDGKSEEEEEEEEQEEEEALIAEMQMVAEMLQHLVQRPEDYLENIENTVKLYKEELLDALEEIMAEHNPQYLIELDGNKAPEDLFTTVIERLKYLNLRRAAVITKLQSTEEEMNDIVDTEELFRTLAAYKLIAPRYRWYRSKWGRSCPVALKDGNIYSGSADLSVSFLGKMYCLSSEETLKLFSLNPRPCLLPPMPLPPCKIFVFGPRSSGRTTLCNLVAEHFKGKVVDYAEIVQPRFDEAREKLIKDTIKEVTNTAIKSVKERLLMELKSRKQEERTLKELQAQYAKKEYEDFMDNKMFKSTEDLQSLDDEATAPSSQKYSSLDVLDEDKTRSDYTLVDVDKDVSTEDSIEEVNETHPEVLFIVEDTLRQAKDLNFEQPFEKHTELLEEVIKEVTEDNKNRFPGAQKYGGWIVDNCPTIRDLWTVFIDKGIIPDLVISLTDGENNGKCFLNRMYLRSKSEIDAKILERLFEELQAKKREEEEIR
SIO_010081: LOC118570707
subclass of: SO_0000673
so part of: LOC118570707
location: complement(join(9810928..9811046,9812917..9813073,9816936..9817084,9823250..9823345,9823432..9823545,9826735..9826879,9837066..9837246,9837326..9837465,9842183..9842281,9843613..9843687,9845309..9845437,9866050..9866235,9869637..9869749,9872286..9872382,9872482..9872534,9874821..9874884,9876263..9876379))
location: region:9810928-9876379:-1
so has part: feature:9876263-9876379:-1:exon
so has part: feature:9874821-9874884:-1:exon
so has part: feature:9872482-9872534:-1:exon
so has part: feature:9872286-9872382:-1:exon
so has part: feature:9869637-9869749:-1:exon
so has part: feature:9866050-9866235:-1:exon
so has part: feature:9845309-9845437:-1:exon
so has part: feature:9843613-9843687:-1:exon
so has part: feature:9842183-9842281:-1:exon
so has part: feature:9837326-9837465:-1:exon
so has part: feature:9837066-9837246:-1:exon
so has part: feature:9826735-9826879:-1:exon
so has part: feature:9823432-9823545:-1:exon
so has part: feature:9823250-9823345:-1:exon
so has part: feature:9816936-9817084:-1:exon
so has part: feature:9812917-9813073:-1:exon
so has part: feature:9810928-9811046:-1:exon

XP_036025258.1
type: Protein
SIO_000068: ncbiprotein

position:9810928:-1
position: 9810928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9876379:-1
position: 9876379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9876263-9876379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9874821-9874884:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9872482-9872534:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9872286-9872382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9869637-9869749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9866050-9866235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9845309-9845437:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9843613-9843687:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9842183-9842281:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9837326-9837465:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9837066-9837246:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9826735-9826879:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9823432-9823545:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9823250-9823345:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9816936-9817084:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9812917-9813073:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9810928-9811046:-1:exon

Fig4
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Fig4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9882465..9967704
location: region:9882465-9967704:1
so has part: feature:9882465-9967704:1:exon
subclass of: SO_0000010

118570466
type: Gene
SIO_000068: ncbigene

position:9882465:1
position: 9882465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9967704:1
position: 9967704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9882465-9967704:1:exon

Fig4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Fig4
product: FIG4 phosphoinositide 5-phosphatase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036168977.1
SIO_010081: Fig4
subclass of: SO_0000673
so part of: Fig4
location: join(9882465..9882734,9888066..9888164,9889814..9889937,9890635..9890791,9893033..9893083,9896813..9896961,9900473..9900601,9904199..9904299,9904796..9904958,9905355..9905452,9911966..9912099,9913078..9913194,9915388..9915433,9916515..9916663,9917976..9918142,9927581..9927719,9933217..9933275,9934567..9934714,9937307..9937390,9938939..9939134,9940277..9940359,9941609..9941695,9967277..9967704)
location: region:9882465-9967704:1
so has part: feature:9882465-9882734:1:exon
so has part: feature:9888066-9888164:1:exon
so has part: feature:9889814-9889937:1:exon
so has part: feature:9890635-9890791:1:exon
so has part: feature:9893033-9893083:1:exon
so has part: feature:9896813-9896961:1:exon
so has part: feature:9900473-9900601:1:exon
so has part: feature:9904199-9904299:1:exon
so has part: feature:9904796-9904958:1:exon
so has part: feature:9905355-9905452:1:exon
so has part: feature:9911966-9912099:1:exon
so has part: feature:9913078-9913194:1:exon
so has part: feature:9915388-9915433:1:exon
so has part: feature:9916515-9916663:1:exon
so has part: feature:9917976-9918142:1:exon
so has part: feature:9927581-9927719:1:exon
so has part: feature:9933217-9933275:1:exon
so has part: feature:9934567-9934714:1:exon
so has part: feature:9937307-9937390:1:exon
so has part: feature:9938939-9939134:1:exon
so has part: feature:9940277-9940359:1:exon
so has part: feature:9941609-9941695:1:exon
so has part: feature:9967277-9967704:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9882465-9882734:1:exon

position:9882734:1
position: 9882734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9888066-9888164:1:exon

position:9888066:1
position: 9888066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9888164:1
position: 9888164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9889814-9889937:1:exon

position:9889814:1
position: 9889814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9889937:1
position: 9889937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9890635-9890791:1:exon

position:9890635:1
position: 9890635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9890791:1
position: 9890791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9893033-9893083:1:exon

position:9893033:1
position: 9893033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9893083:1
position: 9893083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9896813-9896961:1:exon

position:9896813:1
position: 9896813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9896961:1
position: 9896961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9900473-9900601:1:exon

position:9900473:1
position: 9900473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9900601:1
position: 9900601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9904199-9904299:1:exon

position:9904199:1
position: 9904199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9904299:1
position: 9904299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9904796-9904958:1:exon

position:9904796:1
position: 9904796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9904958:1
position: 9904958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9905355-9905452:1:exon

position:9905355:1
position: 9905355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9905452:1
position: 9905452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9911966-9912099:1:exon

position:9911966:1
position: 9911966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9912099:1
position: 9912099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9913078-9913194:1:exon

position:9913078:1
position: 9913078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9913194:1
position: 9913194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9915388-9915433:1:exon

position:9915388:1
position: 9915388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9915433:1
position: 9915433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9916515-9916663:1:exon

position:9916515:1
position: 9916515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9916663:1
position: 9916663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9917976-9918142:1:exon

position:9917976:1
position: 9917976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9918142:1
position: 9918142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9927581-9927719:1:exon

position:9927581:1
position: 9927581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9927719:1
position: 9927719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9933217-9933275:1:exon

position:9933217:1
position: 9933217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9933275:1
position: 9933275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9934567-9934714:1:exon

position:9934567:1
position: 9934567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9934714:1
position: 9934714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9937307-9937390:1:exon

position:9937307:1
position: 9937307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9937390:1
position: 9937390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9938939-9939134:1:exon

position:9938939:1
position: 9938939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9939134:1
position: 9939134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9940277-9940359:1:exon

position:9940277:1
position: 9940277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9940359:1
position: 9940359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:9941609-9941695:1:exon

position:9941609:1
position: 9941609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9941695:1
position: 9941695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:9967277-9967704:1:exon

position:9967277:1
position: 9967277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fig4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Fig4
product: FIG4 phosphoinositide 5-phosphatase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_036168978.1
SIO_010081: Fig4
subclass of: SO_0000673
so part of: Fig4
location: join(9882465..9882734,9888066..9888164,9889814..9889937,9890635..9890791,9893033..9893083,9896819..9896961,9900473..9900601,9904199..9904299,9904796..9904958,9905355..9905452,9911966..9912099,9913078..9913194,9915388..9915433,9916515..9916663,9917976..9918142,9927581..9927719,9933217..9933275,9934567..9934714,9937307..9937390,9938939..9939134,9940277..9940359,9941609..9941695,9967277..9967704)
location: region:9882465-9967704:1
so has part: feature:9882465-9882734:1:exon
so has part: feature:9888066-9888164:1:exon
so has part: feature:9889814-9889937:1:exon
so has part: feature:9890635-9890791:1:exon
so has part: feature:9893033-9893083:1:exon
so has part: feature:9896819-9896961:1:exon
so has part: feature:9900473-9900601:1:exon
so has part: feature:9904199-9904299:1:exon
so has part: feature:9904796-9904958:1:exon
so has part: feature:9905355-9905452:1:exon
so has part: feature:9911966-9912099:1:exon
so has part: feature:9913078-9913194:1:exon
so has part: feature:9915388-9915433:1:exon
so has part: feature:9916515-9916663:1:exon
so has part: feature:9917976-9918142:1:exon
so has part: feature:9927581-9927719:1:exon
so has part: feature:9933217-9933275:1:exon
so has part: feature:9934567-9934714:1:exon
so has part: feature:9937307-9937390:1:exon
so has part: feature:9938939-9939134:1:exon
so has part: feature:9940277-9940359:1:exon
so has part: feature:9941609-9941695:1:exon
so has part: feature:9967277-9967704:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9882465-9882734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9888066-9888164:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9889814-9889937:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9890635-9890791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9893033-9893083:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9896819-9896961:1:exon

position:9896819:1
position: 9896819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9900473-9900601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9904199-9904299:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9904796-9904958:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9905355-9905452:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9911966-9912099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9913078-9913194:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9915388-9915433:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9916515-9916663:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9917976-9918142:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9927581-9927719:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9933217-9933275:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9934567-9934714:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9937307-9937390:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9938939-9939134:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9940277-9940359:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9941609-9941695:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9967277-9967704:1:exon

Fig4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Fig4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyphosphoinositide phosphatase isoform X1
translation: MPTAAAPIISSVQKLVLYETRARYFLVGSNHAETKFRVLKIDRTEPKDLVIIDDRHVYTQQEVRELLGRLDLGNRTKMSQKGSSGLFRAVSAFGIVGFVRFLEGYYIVLITKRRKMADIGGHAIYKIEDTNMIYIPNDSVRITHPDEARYLRIFQNVDLSSNFYFSYSYDLSHSLQYNLTVLRMPLEMLKSETSKTRQESFDIFEDEGLITQGGSGVFGISSEPYMKYVWNGELLDIIKNTVHRDWLLYIIHGFCGQSKLLIYGRPVYVTLIARRSSKFAGTRFLKRGANCEGDVANEVETEQILCDASVMSFTAGSYSSYVQVRGSVPLYWSQDISTMMPKPPITLDQADPFAHVAALHFDQMLQRFGSPIIILNLVKEREKRKHERILSEELVAAVTYLNQFLPPEHTIVYIPWDMAKYTKSKLCNVLDRLNVIAESVVKKTGFFVNRPDSYCSVLRPDEKWNELGGCVIPTGRLQTGILRTNCVDCLDRTNTAQFMVGKCALAYQLYSLGLMDKPNLQFDTDAVRLFEELYEDHGDTLSLQYGGSQLVHRVKTYRKIAPWTQHSKDIMQTLSRYYSNAFSDADRQDSINLFLGVFHPTEGKPHLWELPTDFYLHHKNTMSLSPSRRSYTYWWTPEVIKHLPLPYDEVICAANLKKLIVKKFHRCEEEIDIHNEFFRPYELSSFDDTFCLAMTSSARDFMPKTVGIDPSPFTVRKPDETGKSVLGNKSNREEAVLQRKTAASAPPPPSEEAVSSSSEDDSGTDREDEGSVSQRSTPVKMTDPGDSTKVTENVVQPMKEVYGINLSDTLSEEDFSIYARFVQLGQSQHKQDRSSQQPCSRCSDGVIKLTPISAFSQDNIYEVQPPRVDRKSTEIFHAHIQASHGIMQPLGKEDTAMYREYIRNRYL
SIO_010081: Fig4
subclass of: SO_0000673
so part of: Fig4
location: join(9882669..9882734,9888066..9888164,9889814..9889937,9890635..9890791,9893033..9893083,9896813..9896961,9900473..9900601,9904199..9904299,9904796..9904958,9905355..9905452,9911966..9912099,9913078..9913194,9915388..9915433,9916515..9916663,9917976..9918142,9927581..9927719,9933217..9933275,9934567..9934714,9937307..9937390,9938939..9939134,9940277..9940359,9941609..9941695,9967277..9967454)
location: region:9882669-9967454:1
so has part: feature:9882669-9882734:1:exon
so has part: feature:9888066-9888164:1:exon
so has part: feature:9889814-9889937:1:exon
so has part: feature:9890635-9890791:1:exon
so has part: feature:9893033-9893083:1:exon
so has part: feature:9896813-9896961:1:exon
so has part: feature:9900473-9900601:1:exon
so has part: feature:9904199-9904299:1:exon
so has part: feature:9904796-9904958:1:exon
so has part: feature:9905355-9905452:1:exon
so has part: feature:9911966-9912099:1:exon
so has part: feature:9913078-9913194:1:exon
so has part: feature:9915388-9915433:1:exon
so has part: feature:9916515-9916663:1:exon
so has part: feature:9917976-9918142:1:exon
so has part: feature:9927581-9927719:1:exon
so has part: feature:9933217-9933275:1:exon
so has part: feature:9934567-9934714:1:exon
so has part: feature:9937307-9937390:1:exon
so has part: feature:9938939-9939134:1:exon
so has part: feature:9940277-9940359:1:exon
so has part: feature:9941609-9941695:1:exon
so has part: feature:9967277-9967454:1:exon

XP_036024870.1
type: Protein
SIO_000068: ncbiprotein

position:9882669:1
position: 9882669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9967454:1
position: 9967454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9882669-9882734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9888066-9888164:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9889814-9889937:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9890635-9890791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9893033-9893083:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9896813-9896961:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9900473-9900601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9904199-9904299:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9904796-9904958:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9905355-9905452:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9911966-9912099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9913078-9913194:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9915388-9915433:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9916515-9916663:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9917976-9918142:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9927581-9927719:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9933217-9933275:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9934567-9934714:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9937307-9937390:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9938939-9939134:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9940277-9940359:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9941609-9941695:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9967277-9967454:1:exon

Fig4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Fig4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyphosphoinositide phosphatase isoform X2
translation: MPTAAAPIISSVQKLVLYETRARYFLVGSNHAETKFRVLKIDRTEPKDLVIIDDRHVYTQQEVRELLGRLDLGNRTKMSQKGSSGLFRAVSAFGIVGFVRFLEGYYIVLITKRRKMADIGGHAIYKIEDTNMIYIPNDSVRITHPDEARYLRIFQNVDLSSNFYFSYDLSHSLQYNLTVLRMPLEMLKSETSKTRQESFDIFEDEGLITQGGSGVFGISSEPYMKYVWNGELLDIIKNTVHRDWLLYIIHGFCGQSKLLIYGRPVYVTLIARRSSKFAGTRFLKRGANCEGDVANEVETEQILCDASVMSFTAGSYSSYVQVRGSVPLYWSQDISTMMPKPPITLDQADPFAHVAALHFDQMLQRFGSPIIILNLVKEREKRKHERILSEELVAAVTYLNQFLPPEHTIVYIPWDMAKYTKSKLCNVLDRLNVIAESVVKKTGFFVNRPDSYCSVLRPDEKWNELGGCVIPTGRLQTGILRTNCVDCLDRTNTAQFMVGKCALAYQLYSLGLMDKPNLQFDTDAVRLFEELYEDHGDTLSLQYGGSQLVHRVKTYRKIAPWTQHSKDIMQTLSRYYSNAFSDADRQDSINLFLGVFHPTEGKPHLWELPTDFYLHHKNTMSLSPSRRSYTYWWTPEVIKHLPLPYDEVICAANLKKLIVKKFHRCEEEIDIHNEFFRPYELSSFDDTFCLAMTSSARDFMPKTVGIDPSPFTVRKPDETGKSVLGNKSNREEAVLQRKTAASAPPPPSEEAVSSSSEDDSGTDREDEGSVSQRSTPVKMTDPGDSTKVTENVVQPMKEVYGINLSDTLSEEDFSIYARFVQLGQSQHKQDRSSQQPCSRCSDGVIKLTPISAFSQDNIYEVQPPRVDRKSTEIFHAHIQASHGIMQPLGKEDTAMYREYIRNRYL
SIO_010081: Fig4
subclass of: SO_0000673
so part of: Fig4
location: join(9882669..9882734,9888066..9888164,9889814..9889937,9890635..9890791,9893033..9893083,9896819..9896961,9900473..9900601,9904199..9904299,9904796..9904958,9905355..9905452,9911966..9912099,9913078..9913194,9915388..9915433,9916515..9916663,9917976..9918142,9927581..9927719,9933217..9933275,9934567..9934714,9937307..9937390,9938939..9939134,9940277..9940359,9941609..9941695,9967277..9967454)
location: region:9882669-9967454:1
so has part: feature:9882669-9882734:1:exon
so has part: feature:9888066-9888164:1:exon
so has part: feature:9889814-9889937:1:exon
so has part: feature:9890635-9890791:1:exon
so has part: feature:9893033-9893083:1:exon
so has part: feature:9896819-9896961:1:exon
so has part: feature:9900473-9900601:1:exon
so has part: feature:9904199-9904299:1:exon
so has part: feature:9904796-9904958:1:exon
so has part: feature:9905355-9905452:1:exon
so has part: feature:9911966-9912099:1:exon
so has part: feature:9913078-9913194:1:exon
so has part: feature:9915388-9915433:1:exon
so has part: feature:9916515-9916663:1:exon
so has part: feature:9917976-9918142:1:exon
so has part: feature:9927581-9927719:1:exon
so has part: feature:9933217-9933275:1:exon
so has part: feature:9934567-9934714:1:exon
so has part: feature:9937307-9937390:1:exon
so has part: feature:9938939-9939134:1:exon
so has part: feature:9940277-9940359:1:exon
so has part: feature:9941609-9941695:1:exon
so has part: feature:9967277-9967454:1:exon

XP_036024871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9882669-9882734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9888066-9888164:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9889814-9889937:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9890635-9890791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9893033-9893083:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9896819-9896961:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9900473-9900601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9904199-9904299:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9904796-9904958:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9905355-9905452:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9911966-9912099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9913078-9913194:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9915388-9915433:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9916515-9916663:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9917976-9918142:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9927581-9927719:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9933217-9933275:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9934567-9934714:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9937307-9937390:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9938939-9939134:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9940277-9940359:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9941609-9941695:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9967277-9967454:1:exon

Gpr6
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Gpr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10068278..10070642
location: region:10068278-10070642:1
so has part: feature:10068278-10070642:1:exon
subclass of: SO_0000010

118570487
type: Gene
SIO_000068: ncbigene

position:10068278:1
position: 10068278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10070642:1
position: 10070642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10068278-10070642:1:exon

Gpr6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Gpr6
product: G protein-coupled receptor 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_036169017.1
SIO_010081: Gpr6
subclass of: SO_0000673
so part of: Gpr6
location: join(10068278..10068438,10069009..10070642)
location: region:10068278-10070642:1
so has part: feature:10068278-10068438:1:exon
so has part: feature:10069009-10070642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10068278-10068438:1:exon

position:10068438:1
position: 10068438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10069009-10070642:1:exon

position:10069009:1
position: 10069009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gpr6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Gpr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 6
translation: MNASAASLNDSQVVAVAAEGAAAAATAAGAPDTSEWGPPAASAALGGGGGPNGSLELSSQLPAGPSGLLLSAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYVVPSETVSLLMVGFLVASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLALGLLPVLGWNCLADRSSCSVVRPLTRSHVALLSTSFFVVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSQEDPAIYTYATLLPATYNSMINPIIYAFRNQEIQRALWLLFCGCFQSKVPFRSRSPSEV
SIO_010081: Gpr6
subclass of: SO_0000673
so part of: Gpr6
location: 10069027..10070118
location: region:10069027-10070118:1
so has part: feature:10069027-10070118:1:exon

XP_036024910.1
type: Protein
SIO_000068: ncbiprotein

position:10069027:1
position: 10069027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10070118:1
position: 10070118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10069027-10070118:1:exon

LOC118570682
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118570682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 10108122..10108370
location: region:10108122-10108370:1
so has part: feature:10108122-10108370:1:exon