Onychomys torridus chromosome 13, mOncTor1.1, whole genome shotgun sequence.
type: Entry
definition: Onychomys torridus chromosome 13, mOncTor1.1, whole genome shotgun sequence.
sequence version: NC_050455.1
sequence date: 2020-09-23
sequence: sequence
division: CON
label: NC_050455.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA664182
dblink: SAMEA104026389
keyword: WGS
keyword: RefSeq
source: Onychomys torridus (southern grasshopper mouse)
organism: Onychomys torridus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Onychomys.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR877200.1.\nAssembly name: mOncTor1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the SC on 2020/08/21. The\noriginal whole-genome shotgun project has the accession\nCAJFAA000000000.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Onychomys torridus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 78371027
topology: linear
so has quality: SO_0000987
location: 1..78371027
location: region:1-78371027:1
RO_0002162: 38674

NC_050455
type: RefSeq
SIO_000068: refseq

PRJNA664182
type: BioProject
SIO_000068: bioproject

SAMEA104026389
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78371027:1
position: 78371027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-78371027:1:source
so part of: sequence
organism: Onychomys torridus
mol type: genomic DNA
chromosome: 13

38674
type: Taxonomy
SIO_000068: taxonomy

LOC118594934
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 14673..17678
location: region:14673-17678:1
so has part: feature:14673-17678:1:exon
subclass of: SO_0000010

118594934
type: Gene
SIO_000068: ncbigene

position:14673:1
position: 14673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17678:1
position: 17678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14673-17678:1:exon

LOC118594934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118594934
product: protein ZNF738-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_036205189.1
SIO_010081: LOC118594934
subclass of: SO_0000673
so part of: LOC118594934
location: join(14673..14738,17520..17678)
location: region:14673-17678:1
so has part: feature:14673-14738:1:exon
so has part: feature:17520-17678:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14673-14738:1:exon

position:14738:1
position: 14738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17520-17678:1:exon

position:17520:1
position: 17520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118594934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118594934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ZNF738-like
translation: MGKDGEDFRGKRIAFMILEHKQSPLAFKDVAIYFSKEEWECLDTAQRDLYREVMLENYSNLVSVGENKFFHDCC
SIO_010081: LOC118594934
subclass of: SO_0000673
so part of: LOC118594934
location: join(14673..14738,17520..17678)
location: region:14673-17678:1
so has part: feature:14673-14738:1:exon
so has part: feature:17520-17678:1:exon

XP_036061082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14673-14738:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17520-17678:1:exon

Cetn1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Cetn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(57195..57713)
location: region:57195-57713:-1
so has part: feature:57195-57713:-1:exon
subclass of: SO_0000010

118594447
type: Gene
SIO_000068: ncbigene

position:57195:-1
position: 57195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57713:-1
position: 57713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57195-57713:-1:exon

Cetn1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Cetn1
product: centrin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_036204303.1
SIO_010081: Cetn1
subclass of: SO_0000673
so part of: Cetn1
location: complement(57195..57713)
location: region:57195-57713:-1
so has part: feature:57195-57713:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57195-57713:-1:exon

Cetn1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Cetn1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrin-1
translation: MASNLRKSNVASTSYKRKVGPKTELTEDQKQEVREAFDLFDSDGSGTIDVKELKVAMRALGFEPRKEEMKKMISEVDKEATGKISFNDFLAVMTQKMAEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGESLTDEELQEMIDEADRDGDGEVNEEEFLKIMKKTNLY
SIO_010081: Cetn1
subclass of: SO_0000673
so part of: Cetn1
location: complement(57195..57713)
location: region:57195-57713:-1
so has part: feature:57195-57713:-1:exon

XP_036060196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57195-57713:-1:exon

Colec12
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Colec12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 118612..296562
location: region:118612-296562:1
so has part: feature:118612-296562:1:exon
subclass of: SO_0000010

118594824
type: Gene
SIO_000068: ncbigene

position:118612:1
position: 118612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296562:1
position: 296562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118612-296562:1:exon

Colec12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Colec12
product: collectin subfamily member 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205027.1
SIO_010081: Colec12
subclass of: SO_0000673
so part of: Colec12
location: join(118612..118777,138996..139046,266916..267038,274313..274411,275483..276529,283148..283627,284458..284594,285709..285818,294560..294705,295992..296562)
location: region:118612-296562:1
so has part: feature:118612-118777:1:exon
so has part: feature:138996-139046:1:exon
so has part: feature:266916-267038:1:exon
so has part: feature:274313-274411:1:exon
so has part: feature:275483-276529:1:exon
so has part: feature:283148-283627:1:exon
so has part: feature:284458-284594:1:exon
so has part: feature:285709-285818:1:exon
so has part: feature:294560-294705:1:exon
so has part: feature:295992-296562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118612-118777:1:exon

position:118777:1
position: 118777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:138996-139046:1:exon

position:138996:1
position: 138996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139046:1
position: 139046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:266916-267038:1:exon

position:266916:1
position: 266916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267038:1
position: 267038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:274313-274411:1:exon

position:274313:1
position: 274313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274411:1
position: 274411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:275483-276529:1:exon

position:275483:1
position: 275483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276529:1
position: 276529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:283148-283627:1:exon

position:283148:1
position: 283148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283627:1
position: 283627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:284458-284594:1:exon

position:284458:1
position: 284458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284594:1
position: 284594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:285709-285818:1:exon

position:285709:1
position: 285709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285818:1
position: 285818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:294560-294705:1:exon

position:294560:1
position: 294560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294705:1
position: 294705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:295992-296562:1:exon

position:295992:1
position: 295992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Colec12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Colec12
product: collectin subfamily member 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205026.1
SIO_010081: Colec12
subclass of: SO_0000673
so part of: Colec12
location: join(118612..118777,138996..139046,266916..267038,274313..274411,275483..276529,283148..283627,284458..284594,285709..285818,294560..294705,296076..296562)
location: region:118612-296562:1
so has part: feature:118612-118777:1:exon
so has part: feature:138996-139046:1:exon
so has part: feature:266916-267038:1:exon
so has part: feature:274313-274411:1:exon
so has part: feature:275483-276529:1:exon
so has part: feature:283148-283627:1:exon
so has part: feature:284458-284594:1:exon
so has part: feature:285709-285818:1:exon
so has part: feature:294560-294705:1:exon
so has part: feature:296076-296562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118612-118777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138996-139046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266916-267038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274313-274411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275483-276529:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283148-283627:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284458-284594:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285709-285818:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:294560-294705:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:296076-296562:1:exon

position:296076:1
position: 296076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Colec12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Colec12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collectin-12 isoform X1
translation: MSWVTMKDDFAEEEEVQSFGYKRFGIQEGTQCTKCKNNWALKFSIILLYILCALLTITVAILAYKVVEKMDNVTGGLEISRQTYNDKLTAVESDLKKLGDQTGKKAISTNSELSTFRSDILDLRQQLQEITEKTSKNKDTLEKLQASGDSLVDRQSQLKETLQNNSFLITTVNKTLQAYNGYVTNLQQDTSVLQGNLQNQMYSQNVVIMNLNNLNLTQVQQRNLITNLQRSVDDTSQAIQRIKNDFQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALAKANNDTLEDMNSQLSSFTGQMDNITTISQANEQSLKDLQDLHKGAENRTAIKFSQLEERFQVFETDIVNIISNISYTAHHLRTLTSNLNEVRTTCTDTLTRHTDDLTSLNNTLVNIRLDSVSLRMQQDLMRARLDTEVANLSVIMEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGSQGPPGPSGNKGQKGEKGEPGPPGPAGERGPIGPVGPPGERGSKGSKGSQGPKGSRGSPGKPGPQGPNGDPGPPGPPGKDGLPGPQGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGLPGPPGPSGAMEPLALQNEPSETNGCPPHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSSHLVFINSREEQQWIKKQTVGRDSHWIGLTDSEQENEWRWLDGTPVDYKNWKAGQPDNWGNGHGPGEDCAGLIYAGQWNDFQCDEINNFICEKEREADWMGKALKTNGHTTAL
SIO_010081: Colec12
subclass of: SO_0000673
so part of: Colec12
location: join(118756..118777,138996..139046,266916..267038,274313..274411,275483..276529,283148..283627,284458..284594,285709..285818,294560..294705,296076..296125)
location: region:118756-296125:1
so has part: feature:118756-118777:1:exon
so has part: feature:138996-139046:1:exon
so has part: feature:266916-267038:1:exon
so has part: feature:274313-274411:1:exon
so has part: feature:275483-276529:1:exon
so has part: feature:283148-283627:1:exon
so has part: feature:284458-284594:1:exon
so has part: feature:285709-285818:1:exon
so has part: feature:294560-294705:1:exon
so has part: feature:296076-296125:1:exon

XP_036060919.1
type: Protein
SIO_000068: ncbiprotein

position:118756:1
position: 118756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296125:1
position: 296125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118756-118777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138996-139046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266916-267038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274313-274411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275483-276529:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283148-283627:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284458-284594:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285709-285818:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:294560-294705:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:296076-296125:1:exon

Colec12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Colec12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collectin-12 isoform X2
translation: MSWVTMKDDFAEEEEVQSFGYKRFGIQEGTQCTKCKNNWALKFSIILLYILCALLTITVAILAYKVVEKMDNVTGGLEISRQTYNDKLTAVESDLKKLGDQTGKKAISTNSELSTFRSDILDLRQQLQEITEKTSKNKDTLEKLQASGDSLVDRQSQLKETLQNNSFLITTVNKTLQAYNGYVTNLQQDTSVLQGNLQNQMYSQNVVIMNLNNLNLTQVQQRNLITNLQRSVDDTSQAIQRIKNDFQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALAKANNDTLEDMNSQLSSFTGQMDNITTISQANEQSLKDLQDLHKGAENRTAIKFSQLEERFQVFETDIVNIISNISYTAHHLRTLTSNLNEVRTTCTDTLTRHTDDLTSLNNTLVNIRLDSVSLRMQQDLMRARLDTEVANLSVIMEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGSQGPPGPSGNKGQKGEKGEPGPPGPAGERGPIGPVGPPGERGSKGSKGSQGPKGSRGSPGKPGPQGPNGDPGPPGPPGKDGLPGPQGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGLPGPPGPSGAMEPLALQNEPSETNGCPPHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSSHLVFINSREEQQWIKKQTVGRDSHWIGLTDSEQENEWRWLDGTPVDYKNWKAGQPDNWGNGHGPGEDCAGLIYAGQWNDFQCDEINNFICEKEREAVPSSTL
SIO_010081: Colec12
subclass of: SO_0000673
so part of: Colec12
location: join(118756..118777,138996..139046,266916..267038,274313..274411,275483..276529,283148..283627,284458..284594,285709..285818,294560..294705,295992..296011)
location: region:118756-296011:1
so has part: feature:118756-118777:1:exon
so has part: feature:138996-139046:1:exon
so has part: feature:266916-267038:1:exon
so has part: feature:274313-274411:1:exon
so has part: feature:275483-276529:1:exon
so has part: feature:283148-283627:1:exon
so has part: feature:284458-284594:1:exon
so has part: feature:285709-285818:1:exon
so has part: feature:294560-294705:1:exon
so has part: feature:295992-296011:1:exon

XP_036060920.1
type: Protein
SIO_000068: ncbiprotein

position:296011:1
position: 296011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118756-118777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138996-139046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266916-267038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274313-274411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275483-276529:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283148-283627:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284458-284594:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285709-285818:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:294560-294705:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:295992-296011:1:exon

LOC118594630
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594630
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 291585..292921
location: region:291585-292921:1
so has part: feature:291585-292921:1:exon

118594630
type: Gene
SIO_000068: ncbigene

position:291585:1
position: 291585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292921:1
position: 292921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291585-292921:1:exon

LOC118594630
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118594630
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118594630
subclass of: SO_0000673
so part of: LOC118594630
location: 291585..291638
location: region:291585-291638:1
so has part: feature:291585-291638:1:exon

position:291638:1
position: 291638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291585-291638:1:exon

LOC118594630
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118594630
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118594630
subclass of: SO_0000673
so part of: LOC118594630
location: 292132..292921
location: region:292132-292921:1
so has part: feature:292132-292921:1:exon

position:292132:1
position: 292132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292132-292921:1:exon

Thoc1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Thoc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 361924..408519
location: region:361924-408519:1
so has part: feature:361924-408519:1:exon
subclass of: SO_0000010

118594861
type: Gene
SIO_000068: ncbigene

position:361924:1
position: 361924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408519:1
position: 408519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361924-408519:1:exon

Thoc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Thoc1
product: THO complex 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205086.1
SIO_010081: Thoc1
subclass of: SO_0000673
so part of: Thoc1
location: join(361924..362041,364343..364416,364527..364587,365894..365960,370439..370557,371324..371372,371915..372010,377935..378017,379335..379408,381109..381217,388710..388841,398712..398812,400479..400545,400743..400793,400882..400952,401278..401373,401916..401981,404435..404518,406695..406842,407581..407656,408116..408519)
location: region:361924-408519:1
so has part: feature:361924-362041:1:exon
so has part: feature:364343-364416:1:exon
so has part: feature:364527-364587:1:exon
so has part: feature:365894-365960:1:exon
so has part: feature:370439-370557:1:exon
so has part: feature:371324-371372:1:exon
so has part: feature:371915-372010:1:exon
so has part: feature:377935-378017:1:exon
so has part: feature:379335-379408:1:exon
so has part: feature:381109-381217:1:exon
so has part: feature:388710-388841:1:exon
so has part: feature:398712-398812:1:exon
so has part: feature:400479-400545:1:exon
so has part: feature:400743-400793:1:exon
so has part: feature:400882-400952:1:exon
so has part: feature:401278-401373:1:exon
so has part: feature:401916-401981:1:exon
so has part: feature:404435-404518:1:exon
so has part: feature:406695-406842:1:exon
so has part: feature:407581-407656:1:exon
so has part: feature:408116-408519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361924-362041:1:exon

position:362041:1
position: 362041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:364343-364416:1:exon

position:364343:1
position: 364343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364416:1
position: 364416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:364527-364587:1:exon

position:364527:1
position: 364527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364587:1
position: 364587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:365894-365960:1:exon

position:365894:1
position: 365894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365960:1
position: 365960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:370439-370557:1:exon

position:370439:1
position: 370439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370557:1
position: 370557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:371324-371372:1:exon

position:371324:1
position: 371324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371372:1
position: 371372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:371915-372010:1:exon

position:371915:1
position: 371915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372010:1
position: 372010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:377935-378017:1:exon

position:377935:1
position: 377935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378017:1
position: 378017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:379335-379408:1:exon

position:379335:1
position: 379335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379408:1
position: 379408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:381109-381217:1:exon

position:381109:1
position: 381109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381217:1
position: 381217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:388710-388841:1:exon

position:388710:1
position: 388710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388841:1
position: 388841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:398712-398812:1:exon

position:398712:1
position: 398712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398812:1
position: 398812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:400479-400545:1:exon

position:400479:1
position: 400479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400545:1
position: 400545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:400743-400793:1:exon

position:400743:1
position: 400743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400793:1
position: 400793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:400882-400952:1:exon

position:400882:1
position: 400882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400952:1
position: 400952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:401278-401373:1:exon

position:401278:1
position: 401278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401373:1
position: 401373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:401916-401981:1:exon

position:401916:1
position: 401916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401981:1
position: 401981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:404435-404518:1:exon

position:404435:1
position: 404435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404518:1
position: 404518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:406695-406842:1:exon

position:406695:1
position: 406695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406842:1
position: 406842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:407581-407656:1:exon

position:407581:1
position: 407581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407656:1
position: 407656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:408116-408519:1:exon

position:408116:1
position: 408116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Thoc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Thoc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THO complex subunit 1
translation: MSPTPALFSLPEARTRFTKSTREALNNRNIKPLLNAFSQLPGSENEKKCTLDQAFRGVLEEEIINHSACENVLAIISLAIGGVTESVCTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNVATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFNLENITVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWSLQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERASDTKPTRVVRKRAAPEDFLGKGPNKKILIGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMVESEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENESPDVRRHKPVTGEQIELFANKLGEQWKILAPYLEIKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGAHATTDNLISALNKCGLSDLAESLTNDTETNS
SIO_010081: Thoc1
subclass of: SO_0000673
so part of: Thoc1
location: join(361988..362041,364343..364416,364527..364587,365894..365960,370439..370557,371324..371372,371915..372010,377935..378017,379335..379408,381109..381217,388710..388841,398712..398812,400479..400545,400743..400793,400882..400952,401278..401373,401916..401981,404435..404518,406695..406842,407581..407656,408116..408411)
location: region:361988-408411:1
so has part: feature:361988-362041:1:exon
so has part: feature:364343-364416:1:exon
so has part: feature:364527-364587:1:exon
so has part: feature:365894-365960:1:exon
so has part: feature:370439-370557:1:exon
so has part: feature:371324-371372:1:exon
so has part: feature:371915-372010:1:exon
so has part: feature:377935-378017:1:exon
so has part: feature:379335-379408:1:exon
so has part: feature:381109-381217:1:exon
so has part: feature:388710-388841:1:exon
so has part: feature:398712-398812:1:exon
so has part: feature:400479-400545:1:exon
so has part: feature:400743-400793:1:exon
so has part: feature:400882-400952:1:exon
so has part: feature:401278-401373:1:exon
so has part: feature:401916-401981:1:exon
so has part: feature:404435-404518:1:exon
so has part: feature:406695-406842:1:exon
so has part: feature:407581-407656:1:exon
so has part: feature:408116-408411:1:exon

XP_036060979.1
type: Protein
SIO_000068: ncbiprotein

position:361988:1
position: 361988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408411:1
position: 408411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361988-362041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364343-364416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364527-364587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:365894-365960:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370439-370557:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:371324-371372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371915-372010:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:377935-378017:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:379335-379408:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:381109-381217:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:388710-388841:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398712-398812:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:400479-400545:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:400743-400793:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400882-400952:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401278-401373:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401916-401981:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:404435-404518:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:406695-406842:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:407581-407656:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:408116-408411:1:exon

Usp14
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Usp14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(408413..446084)
location: region:408413-446084:-1
so has part: feature:408413-446084:-1:exon
subclass of: SO_0000010

118594862
type: Gene
SIO_000068: ncbigene

position:408413:-1
position: 408413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446084:-1
position: 446084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408413-446084:-1:exon

Usp14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Usp14
product: ubiquitin specific peptidase 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205089.1
SIO_010081: Usp14
subclass of: SO_0000673
so part of: Usp14
location: complement(join(408413..411109,412050..412157,412771..412831,415240..415368,416865..416957,417463..417528,420769..420883,421600..421682,422022..422102,423757..423887,425618..425676,431677..431780,437355..437387,439346..439491,445750..446084))
location: region:408413-446084:-1
so has part: feature:445750-446084:-1:exon
so has part: feature:439346-439491:-1:exon
so has part: feature:437355-437387:-1:exon
so has part: feature:431677-431780:-1:exon
so has part: feature:425618-425676:-1:exon
so has part: feature:423757-423887:-1:exon
so has part: feature:422022-422102:-1:exon
so has part: feature:421600-421682:-1:exon
so has part: feature:420769-420883:-1:exon
so has part: feature:417463-417528:-1:exon
so has part: feature:416865-416957:-1:exon
so has part: feature:415240-415368:-1:exon
so has part: feature:412771-412831:-1:exon
so has part: feature:412050-412157:-1:exon
so has part: feature:408413-411109:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445750-446084:-1:exon

position:445750:-1
position: 445750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:439346-439491:-1:exon

position:439346:-1
position: 439346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439491:-1
position: 439491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:437355-437387:-1:exon

position:437355:-1
position: 437355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437387:-1
position: 437387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:431677-431780:-1:exon

position:431677:-1
position: 431677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431780:-1
position: 431780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:425618-425676:-1:exon

position:425618:-1
position: 425618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425676:-1
position: 425676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:423757-423887:-1:exon

position:423757:-1
position: 423757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423887:-1
position: 423887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:422022-422102:-1:exon

position:422022:-1
position: 422022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422102:-1
position: 422102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:421600-421682:-1:exon

position:421600:-1
position: 421600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421682:-1
position: 421682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:420769-420883:-1:exon

position:420769:-1
position: 420769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420883:-1
position: 420883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:417463-417528:-1:exon

position:417463:-1
position: 417463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417528:-1
position: 417528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:416865-416957:-1:exon

position:416865:-1
position: 416865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416957:-1
position: 416957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:415240-415368:-1:exon

position:415240:-1
position: 415240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415368:-1
position: 415368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:412771-412831:-1:exon

position:412771:-1
position: 412771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412831:-1
position: 412831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:412050-412157:-1:exon

position:412050:-1
position: 412050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412157:-1
position: 412157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:408413-411109:-1:exon

position:411109:-1
position: 411109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Usp14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Usp14
product: ubiquitin specific peptidase 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205088.1
SIO_010081: Usp14
subclass of: SO_0000673
so part of: Usp14
location: complement(join(408413..411109,412050..412157,412771..412831,415240..415368,416865..416957,417463..417528,420769..420883,421600..421682,422022..422102,423757..423887,425618..425676,431677..431780,432920..433024,437355..437387,439346..439491,445750..446084))
location: region:408413-446084:-1
so has part: feature:445750-446084:-1:exon
so has part: feature:439346-439491:-1:exon
so has part: feature:437355-437387:-1:exon
so has part: feature:432920-433024:-1:exon
so has part: feature:431677-431780:-1:exon
so has part: feature:425618-425676:-1:exon
so has part: feature:423757-423887:-1:exon
so has part: feature:422022-422102:-1:exon
so has part: feature:421600-421682:-1:exon
so has part: feature:420769-420883:-1:exon
so has part: feature:417463-417528:-1:exon
so has part: feature:416865-416957:-1:exon
so has part: feature:415240-415368:-1:exon
so has part: feature:412771-412831:-1:exon
so has part: feature:412050-412157:-1:exon
so has part: feature:408413-411109:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445750-446084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439346-439491:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:437355-437387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432920-433024:-1:exon

position:432920:-1
position: 432920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433024:-1
position: 433024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:431677-431780:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425618-425676:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:423757-423887:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:422022-422102:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:421600-421682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:420769-420883:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:417463-417528:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:416865-416957:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:415240-415368:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:412771-412831:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:412050-412157:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:408413-411109:-1:exon

Usp14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Usp14
product: ubiquitin specific peptidase 14, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205090.1
SIO_010081: Usp14
subclass of: SO_0000673
so part of: Usp14
location: complement(join(408413..411109,412050..412157,412771..412831,415240..415368,416865..416957,417463..417528,420769..420883,421600..421682,422022..422102,423757..423887,425618..425676,431677..431780,432920..433024,445750..446083))
location: region:408413-446083:-1
so has part: feature:445750-446083:-1:exon
so has part: feature:432920-433024:-1:exon
so has part: feature:431677-431780:-1:exon
so has part: feature:425618-425676:-1:exon
so has part: feature:423757-423887:-1:exon
so has part: feature:422022-422102:-1:exon
so has part: feature:421600-421682:-1:exon
so has part: feature:420769-420883:-1:exon
so has part: feature:417463-417528:-1:exon
so has part: feature:416865-416957:-1:exon
so has part: feature:415240-415368:-1:exon
so has part: feature:412771-412831:-1:exon
so has part: feature:412050-412157:-1:exon
so has part: feature:408413-411109:-1:exon

position:446083:-1
position: 446083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445750-446083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:432920-433024:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:431677-431780:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:425618-425676:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423757-423887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422022-422102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:421600-421682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420769-420883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:417463-417528:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416865-416957:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415240-415368:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:412771-412831:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:412050-412157:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:408413-411109:-1:exon

Usp14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Usp14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 14 isoform X2
translation: MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKMKNMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSASAVTPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDLEDKKVTQQPNGNDKKNGPPKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESEQ
SIO_010081: Usp14
subclass of: SO_0000673
so part of: Usp14
location: complement(join(410958..411109,412050..412157,412771..412831,415240..415368,416865..416957,417463..417528,420769..420883,421600..421682,422022..422102,423757..423887,425618..425676,431677..431780,437355..437387,439346..439491,445750..445765))
location: region:410958-445765:-1
so has part: feature:445750-445765:-1:exon
so has part: feature:439346-439491:-1:exon
so has part: feature:437355-437387:-1:exon
so has part: feature:431677-431780:-1:exon
so has part: feature:425618-425676:-1:exon
so has part: feature:423757-423887:-1:exon
so has part: feature:422022-422102:-1:exon
so has part: feature:421600-421682:-1:exon
so has part: feature:420769-420883:-1:exon
so has part: feature:417463-417528:-1:exon
so has part: feature:416865-416957:-1:exon
so has part: feature:415240-415368:-1:exon
so has part: feature:412771-412831:-1:exon
so has part: feature:412050-412157:-1:exon
so has part: feature:410958-411109:-1:exon

XP_036060982.1
type: Protein
SIO_000068: ncbiprotein

position:410958:-1
position: 410958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445765:-1
position: 445765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445750-445765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439346-439491:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:437355-437387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431677-431780:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:425618-425676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:423757-423887:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422022-422102:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:421600-421682:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:420769-420883:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:417463-417528:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:416865-416957:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:415240-415368:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:412771-412831:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:412050-412157:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:410958-411109:-1:exon

Usp14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Usp14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 14 isoform X1
translation: MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKMKNGMTVLMMGSADALPEEPSAKTVFVEDMTEEQLATAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSASAVTPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDLEDKKVTQQPNGNDKKNGPPKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESEQ
SIO_010081: Usp14
subclass of: SO_0000673
so part of: Usp14
location: complement(join(410958..411109,412050..412157,412771..412831,415240..415368,416865..416957,417463..417528,420769..420883,421600..421682,422022..422102,423757..423887,425618..425676,431677..431780,432920..433024,437355..437387,439346..439491,445750..445765))
location: region:410958-445765:-1
so has part: feature:445750-445765:-1:exon
so has part: feature:439346-439491:-1:exon
so has part: feature:437355-437387:-1:exon
so has part: feature:432920-433024:-1:exon
so has part: feature:431677-431780:-1:exon
so has part: feature:425618-425676:-1:exon
so has part: feature:423757-423887:-1:exon
so has part: feature:422022-422102:-1:exon
so has part: feature:421600-421682:-1:exon
so has part: feature:420769-420883:-1:exon
so has part: feature:417463-417528:-1:exon
so has part: feature:416865-416957:-1:exon
so has part: feature:415240-415368:-1:exon
so has part: feature:412771-412831:-1:exon
so has part: feature:412050-412157:-1:exon
so has part: feature:410958-411109:-1:exon

XP_036060981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445750-445765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439346-439491:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:437355-437387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432920-433024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431677-431780:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425618-425676:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:423757-423887:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:422022-422102:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:421600-421682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:420769-420883:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:417463-417528:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:416865-416957:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:415240-415368:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:412771-412831:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:412050-412157:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:410958-411109:-1:exon

Usp14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Usp14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 14 isoform X3
translation: MTVLMMGSADALPEEPSAKTVFVEDMTEEQLATAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSASAVTPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDLEDKKVTQQPNGNDKKNGPPKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESEQ
SIO_010081: Usp14
subclass of: SO_0000673
so part of: Usp14
location: complement(join(410958..411109,412050..412157,412771..412831,415240..415368,416865..416957,417463..417528,420769..420883,421600..421682,422022..422102,423757..423887,425618..425676,431677..431780,432920..433021))
location: region:410958-433021:-1
so has part: feature:432920-433021:-1:exon
so has part: feature:431677-431780:-1:exon
so has part: feature:425618-425676:-1:exon
so has part: feature:423757-423887:-1:exon
so has part: feature:422022-422102:-1:exon
so has part: feature:421600-421682:-1:exon
so has part: feature:420769-420883:-1:exon
so has part: feature:417463-417528:-1:exon
so has part: feature:416865-416957:-1:exon
so has part: feature:415240-415368:-1:exon
so has part: feature:412771-412831:-1:exon
so has part: feature:412050-412157:-1:exon
so has part: feature:410958-411109:-1:exon

XP_036060983.1
type: Protein
SIO_000068: ncbiprotein

position:433021:-1
position: 433021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432920-433021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:431677-431780:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425618-425676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:423757-423887:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422022-422102:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:421600-421682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420769-420883:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417463-417528:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416865-416957:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:415240-415368:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:412771-412831:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:412050-412157:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:410958-411109:-1:exon

LOC118594992
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(467069..467439)
location: region:467069-467439:-1
so has part: feature:467069-467439:-1:exon

118594992
type: Gene
SIO_000068: ncbigene

position:467069:-1
position: 467069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467439:-1
position: 467439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467069-467439:-1:exon

LOC118594992
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118594992
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118594992
subclass of: SO_0000673
so part of: LOC118594992
location: complement(467069..467439)
location: region:467069-467439:-1
so has part: feature:467069-467439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:467069-467439:-1:exon

Rock1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Rock1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(473509..591960)
location: region:473509-591960:-1
so has part: feature:473509-591960:-1:exon
subclass of: SO_0000010

118594662
type: Gene
SIO_000068: ncbigene

position:473509:-1
position: 473509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591960:-1
position: 591960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473509-591960:-1:exon

Rock1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Rock1
product: Rho associated coiled-coil containing protein kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_036204728.1
SIO_010081: Rock1
subclass of: SO_0000673
so part of: Rock1
location: complement(join(473509..475016,476769..476976,477582..477843,478160..478238,480103..480191,480387..480457,486564..486723,487853..488041,491361..491449,492473..492566,494144..494309,496293..496387,498342..498411,500474..500658,502284..502444,504706..504856,506461..506567,511523..511769,511862..511953,513038..513173,518383..518431,523027..523112,528463..528523,530602..530761,538212..538303,540551..540689,541539..541683,542777..542861,543753..543928,547960..548097,548580..548680,557279..557360,590969..591960))
location: region:473509-591960:-1
so has part: feature:590969-591960:-1:exon
so has part: feature:557279-557360:-1:exon
so has part: feature:548580-548680:-1:exon
so has part: feature:547960-548097:-1:exon
so has part: feature:543753-543928:-1:exon
so has part: feature:542777-542861:-1:exon
so has part: feature:541539-541683:-1:exon
so has part: feature:540551-540689:-1:exon
so has part: feature:538212-538303:-1:exon
so has part: feature:530602-530761:-1:exon
so has part: feature:528463-528523:-1:exon
so has part: feature:523027-523112:-1:exon
so has part: feature:518383-518431:-1:exon
so has part: feature:513038-513173:-1:exon
so has part: feature:511862-511953:-1:exon
so has part: feature:511523-511769:-1:exon
so has part: feature:506461-506567:-1:exon
so has part: feature:504706-504856:-1:exon
so has part: feature:502284-502444:-1:exon
so has part: feature:500474-500658:-1:exon
so has part: feature:498342-498411:-1:exon
so has part: feature:496293-496387:-1:exon
so has part: feature:494144-494309:-1:exon
so has part: feature:492473-492566:-1:exon
so has part: feature:491361-491449:-1:exon
so has part: feature:487853-488041:-1:exon
so has part: feature:486564-486723:-1:exon
so has part: feature:480387-480457:-1:exon
so has part: feature:480103-480191:-1:exon
so has part: feature:478160-478238:-1:exon
so has part: feature:477582-477843:-1:exon
so has part: feature:476769-476976:-1:exon
so has part: feature:473509-475016:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:590969-591960:-1:exon

position:590969:-1
position: 590969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557279-557360:-1:exon

position:557279:-1
position: 557279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557360:-1
position: 557360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:548580-548680:-1:exon

position:548580:-1
position: 548580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548680:-1
position: 548680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:547960-548097:-1:exon

position:547960:-1
position: 547960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548097:-1
position: 548097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:543753-543928:-1:exon

position:543753:-1
position: 543753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543928:-1
position: 543928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:542777-542861:-1:exon

position:542777:-1
position: 542777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542861:-1
position: 542861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:541539-541683:-1:exon

position:541539:-1
position: 541539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541683:-1
position: 541683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:540551-540689:-1:exon

position:540551:-1
position: 540551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540689:-1
position: 540689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:538212-538303:-1:exon

position:538212:-1
position: 538212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538303:-1
position: 538303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:530602-530761:-1:exon

position:530602:-1
position: 530602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530761:-1
position: 530761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:528463-528523:-1:exon

position:528463:-1
position: 528463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528523:-1
position: 528523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:523027-523112:-1:exon

position:523027:-1
position: 523027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523112:-1
position: 523112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:518383-518431:-1:exon

position:518383:-1
position: 518383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518431:-1
position: 518431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:513038-513173:-1:exon

position:513038:-1
position: 513038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513173:-1
position: 513173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:511862-511953:-1:exon

position:511862:-1
position: 511862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511953:-1
position: 511953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:511523-511769:-1:exon

position:511523:-1
position: 511523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511769:-1
position: 511769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:506461-506567:-1:exon

position:506461:-1
position: 506461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506567:-1
position: 506567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:504706-504856:-1:exon

position:504706:-1
position: 504706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504856:-1
position: 504856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:502284-502444:-1:exon

position:502284:-1
position: 502284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502444:-1
position: 502444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:500474-500658:-1:exon

position:500474:-1
position: 500474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500658:-1
position: 500658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:498342-498411:-1:exon

position:498342:-1
position: 498342
reference: sequence
type: ReverseStrandPosition
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position:498411:-1
position: 498411
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:496293-496387:-1:exon

position:496293:-1
position: 496293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496387:-1
position: 496387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:494144-494309:-1:exon

position:494144:-1
position: 494144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494309:-1
position: 494309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:492473-492566:-1:exon

position:492473:-1
position: 492473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492566:-1
position: 492566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:491361-491449:-1:exon

position:491361:-1
position: 491361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491449:-1
position: 491449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:487853-488041:-1:exon

position:487853:-1
position: 487853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488041:-1
position: 488041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:486564-486723:-1:exon

position:486564:-1
position: 486564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486723:-1
position: 486723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:480387-480457:-1:exon

position:480387:-1
position: 480387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480457:-1
position: 480457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:480103-480191:-1:exon

position:480103:-1
position: 480103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480191:-1
position: 480191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:478160-478238:-1:exon

position:478160:-1
position: 478160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478238:-1
position: 478238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:477582-477843:-1:exon

position:477582:-1
position: 477582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477843:-1
position: 477843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:476769-476976:-1:exon

position:476769:-1
position: 476769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476976:-1
position: 476976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:473509-475016:-1:exon

position:475016:-1
position: 475016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Rock1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Rock1
product: Rho associated coiled-coil containing protein kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_036204727.1
SIO_010081: Rock1
subclass of: SO_0000673
so part of: Rock1
location: complement(join(473509..475016,476769..476976,477582..477843,478160..478238,480103..480191,480387..480457,486564..486723,487853..488041,491361..491449,492473..492566,494144..494309,496293..496387,498342..498411,500474..500658,502284..502444,504706..504856,506461..506567,511523..511769,511862..511953,513038..513173,518383..518431,523027..523115,528463..528523,530602..530761,538212..538303,540551..540689,541539..541683,542777..542861,543753..543928,547960..548097,548580..548680,557279..557360,590969..591960))
location: region:473509-591960:-1
so has part: feature:590969-591960:-1:exon
so has part: feature:557279-557360:-1:exon
so has part: feature:548580-548680:-1:exon
so has part: feature:547960-548097:-1:exon
so has part: feature:543753-543928:-1:exon
so has part: feature:542777-542861:-1:exon
so has part: feature:541539-541683:-1:exon
so has part: feature:540551-540689:-1:exon
so has part: feature:538212-538303:-1:exon
so has part: feature:530602-530761:-1:exon
so has part: feature:528463-528523:-1:exon
so has part: feature:523027-523115:-1:exon
so has part: feature:518383-518431:-1:exon
so has part: feature:513038-513173:-1:exon
so has part: feature:511862-511953:-1:exon
so has part: feature:511523-511769:-1:exon
so has part: feature:506461-506567:-1:exon
so has part: feature:504706-504856:-1:exon
so has part: feature:502284-502444:-1:exon
so has part: feature:500474-500658:-1:exon
so has part: feature:498342-498411:-1:exon
so has part: feature:496293-496387:-1:exon
so has part: feature:494144-494309:-1:exon
so has part: feature:492473-492566:-1:exon
so has part: feature:491361-491449:-1:exon
so has part: feature:487853-488041:-1:exon
so has part: feature:486564-486723:-1:exon
so has part: feature:480387-480457:-1:exon
so has part: feature:480103-480191:-1:exon
so has part: feature:478160-478238:-1:exon
so has part: feature:477582-477843:-1:exon
so has part: feature:476769-476976:-1:exon
so has part: feature:473509-475016:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:590969-591960:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:557279-557360:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548580-548680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547960-548097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543753-543928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542777-542861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541539-541683:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540551-540689:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:538212-538303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:530602-530761:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:528463-528523:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523027-523115:-1:exon

position:523115:-1
position: 523115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:518383-518431:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:513038-513173:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:511862-511953:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:511523-511769:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:506461-506567:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:504706-504856:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:502284-502444:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:500474-500658:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498342-498411:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:496293-496387:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:494144-494309:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:492473-492566:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:491361-491449:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:487853-488041:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:486564-486723:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:480387-480457:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:480103-480191:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:478160-478238:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:477582-477843:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:476769-476976:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:473509-475016:-1:exon

Rock1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Rock1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-associated protein kinase 1 isoform X2
translation: MSTGDSFESRFEKIDNLLRDPKSEVNSDCLLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGDEETFPIPKAFVGNQLPFVGFTYYSNRRYLPAANPSENRTTSNVDKSLESLQKTIYKLEEQLHNEMQLKDEMEQKCRTSNIKLDKIMKELDEEGNQRRNLESAVSQIEKEKMLLQHRINEYQRKVEQENEKRRNVENEVSTLKDQLEDLRKVSQSSQLANEKLAQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQADKDYYQLQAVLEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLERVEGERKEAQDMLNHSEKEKNNLEIDLNYKLKSLQQRLEQEVNEHKVTKACLTDKHQSIEEAKSVAMCEMEKKLKEEREARERAENRVVETEKQCSMLDVDLKQSLQKLEHMTENKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKGLEKQMKQEINTLLEAKRLLEFEFAQLTKQYRGNEGQMRELQDQLEAEQYFSTLYKTQVKELKEEIEEKNRENLRKIQELQSEKETLSTQLDLAETKAESEQLARGILEEQYFELTQESKKAASRNRQEITDKDHTVSRLEETNNMLTKDIEILRKENEELNERMRTAEEEYKLKKEEEINNLKAAFEKNISTERTLKTQAVNKLAEIMNRKDFKIDRKKANTQDLRKKEKENRKLQLELNQEREKFNQMVVKHQKELNDMQAQLVEECTHRNELQMQLASKESDIEQLRAKLLDLSDSTSVASFPSADETDGNLPESRIEGWLSVPNRGNIKRYGWKKQYVVVSSKKILFYNDEQDKEQSSPSMVLDIDKLFHVRPVTQGDVYRAETEEIPKIFQILYANEGECRKDIEMEPVQQGEKTNFQNHKGHEFIPTLYHFPANCEACAKPLWHVFKPPPALECRRCHVKCHRDHLDKKEDLISPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPSGFVRASPRTMSTRSTANQSFRKVVKNTSGKTS
SIO_010081: Rock1
subclass of: SO_0000673
so part of: Rock1
location: complement(join(475013..475016,476769..476976,477582..477843,478160..478238,480103..480191,480387..480457,486564..486723,487853..488041,491361..491449,492473..492566,494144..494309,496293..496387,498342..498411,500474..500658,502284..502444,504706..504856,506461..506567,511523..511769,511862..511953,513038..513173,518383..518431,523027..523112,528463..528523,530602..530761,538212..538303,540551..540689,541539..541683,542777..542861,543753..543928,547960..548097,548580..548680,557279..557360,590969..591061))
location: region:475013-591061:-1
so has part: feature:590969-591061:-1:exon
so has part: feature:557279-557360:-1:exon
so has part: feature:548580-548680:-1:exon
so has part: feature:547960-548097:-1:exon
so has part: feature:543753-543928:-1:exon
so has part: feature:542777-542861:-1:exon
so has part: feature:541539-541683:-1:exon
so has part: feature:540551-540689:-1:exon
so has part: feature:538212-538303:-1:exon
so has part: feature:530602-530761:-1:exon
so has part: feature:528463-528523:-1:exon
so has part: feature:523027-523112:-1:exon
so has part: feature:518383-518431:-1:exon
so has part: feature:513038-513173:-1:exon
so has part: feature:511862-511953:-1:exon
so has part: feature:511523-511769:-1:exon
so has part: feature:506461-506567:-1:exon
so has part: feature:504706-504856:-1:exon
so has part: feature:502284-502444:-1:exon
so has part: feature:500474-500658:-1:exon
so has part: feature:498342-498411:-1:exon
so has part: feature:496293-496387:-1:exon
so has part: feature:494144-494309:-1:exon
so has part: feature:492473-492566:-1:exon
so has part: feature:491361-491449:-1:exon
so has part: feature:487853-488041:-1:exon
so has part: feature:486564-486723:-1:exon
so has part: feature:480387-480457:-1:exon
so has part: feature:480103-480191:-1:exon
so has part: feature:478160-478238:-1:exon
so has part: feature:477582-477843:-1:exon
so has part: feature:476769-476976:-1:exon
so has part: feature:475013-475016:-1:exon

XP_036060621.1
type: Protein
SIO_000068: ncbiprotein

position:475013:-1
position: 475013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591061:-1
position: 591061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590969-591061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:557279-557360:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548580-548680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547960-548097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543753-543928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542777-542861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541539-541683:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540551-540689:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:538212-538303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:530602-530761:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:528463-528523:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523027-523112:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:518383-518431:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:513038-513173:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:511862-511953:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:511523-511769:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:506461-506567:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:504706-504856:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:502284-502444:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:500474-500658:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498342-498411:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:496293-496387:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:494144-494309:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:492473-492566:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:491361-491449:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:487853-488041:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:486564-486723:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:480387-480457:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:480103-480191:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:478160-478238:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:477582-477843:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:476769-476976:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:475013-475016:-1:exon

Rock1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Rock1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-associated protein kinase 1 isoform X1
translation: MSTGDSFESRFEKIDNLLRDPKSEVNSDCLLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGDEETFPIPKAFVGNQLPFVGFTYYSNRRYLPAANPSENRTTSNVDKSLQESLQKTIYKLEEQLHNEMQLKDEMEQKCRTSNIKLDKIMKELDEEGNQRRNLESAVSQIEKEKMLLQHRINEYQRKVEQENEKRRNVENEVSTLKDQLEDLRKVSQSSQLANEKLAQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQADKDYYQLQAVLEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLERVEGERKEAQDMLNHSEKEKNNLEIDLNYKLKSLQQRLEQEVNEHKVTKACLTDKHQSIEEAKSVAMCEMEKKLKEEREARERAENRVVETEKQCSMLDVDLKQSLQKLEHMTENKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKGLEKQMKQEINTLLEAKRLLEFEFAQLTKQYRGNEGQMRELQDQLEAEQYFSTLYKTQVKELKEEIEEKNRENLRKIQELQSEKETLSTQLDLAETKAESEQLARGILEEQYFELTQESKKAASRNRQEITDKDHTVSRLEETNNMLTKDIEILRKENEELNERMRTAEEEYKLKKEEEINNLKAAFEKNISTERTLKTQAVNKLAEIMNRKDFKIDRKKANTQDLRKKEKENRKLQLELNQEREKFNQMVVKHQKELNDMQAQLVEECTHRNELQMQLASKESDIEQLRAKLLDLSDSTSVASFPSADETDGNLPESRIEGWLSVPNRGNIKRYGWKKQYVVVSSKKILFYNDEQDKEQSSPSMVLDIDKLFHVRPVTQGDVYRAETEEIPKIFQILYANEGECRKDIEMEPVQQGEKTNFQNHKGHEFIPTLYHFPANCEACAKPLWHVFKPPPALECRRCHVKCHRDHLDKKEDLISPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPSGFVRASPRTMSTRSTANQSFRKVVKNTSGKTS
SIO_010081: Rock1
subclass of: SO_0000673
so part of: Rock1
location: complement(join(475013..475016,476769..476976,477582..477843,478160..478238,480103..480191,480387..480457,486564..486723,487853..488041,491361..491449,492473..492566,494144..494309,496293..496387,498342..498411,500474..500658,502284..502444,504706..504856,506461..506567,511523..511769,511862..511953,513038..513173,518383..518431,523027..523115,528463..528523,530602..530761,538212..538303,540551..540689,541539..541683,542777..542861,543753..543928,547960..548097,548580..548680,557279..557360,590969..591061))
location: region:475013-591061:-1
so has part: feature:590969-591061:-1:exon
so has part: feature:557279-557360:-1:exon
so has part: feature:548580-548680:-1:exon
so has part: feature:547960-548097:-1:exon
so has part: feature:543753-543928:-1:exon
so has part: feature:542777-542861:-1:exon
so has part: feature:541539-541683:-1:exon
so has part: feature:540551-540689:-1:exon
so has part: feature:538212-538303:-1:exon
so has part: feature:530602-530761:-1:exon
so has part: feature:528463-528523:-1:exon
so has part: feature:523027-523115:-1:exon
so has part: feature:518383-518431:-1:exon
so has part: feature:513038-513173:-1:exon
so has part: feature:511862-511953:-1:exon
so has part: feature:511523-511769:-1:exon
so has part: feature:506461-506567:-1:exon
so has part: feature:504706-504856:-1:exon
so has part: feature:502284-502444:-1:exon
so has part: feature:500474-500658:-1:exon
so has part: feature:498342-498411:-1:exon
so has part: feature:496293-496387:-1:exon
so has part: feature:494144-494309:-1:exon
so has part: feature:492473-492566:-1:exon
so has part: feature:491361-491449:-1:exon
so has part: feature:487853-488041:-1:exon
so has part: feature:486564-486723:-1:exon
so has part: feature:480387-480457:-1:exon
so has part: feature:480103-480191:-1:exon
so has part: feature:478160-478238:-1:exon
so has part: feature:477582-477843:-1:exon
so has part: feature:476769-476976:-1:exon
so has part: feature:475013-475016:-1:exon

XP_036060620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:590969-591061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:557279-557360:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548580-548680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547960-548097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543753-543928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542777-542861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541539-541683:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540551-540689:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:538212-538303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:530602-530761:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:528463-528523:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523027-523115:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:518383-518431:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:513038-513173:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:511862-511953:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:511523-511769:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:506461-506567:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:504706-504856:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:502284-502444:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:500474-500658:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498342-498411:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:496293-496387:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:494144-494309:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:492473-492566:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:491361-491449:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:487853-488041:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:486564-486723:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:480387-480457:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:480103-480191:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:478160-478238:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:477582-477843:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:476769-476976:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:475013-475016:-1:exon

Rock1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Rock1
product: Rho associated coiled-coil containing protein kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_036204729.1
SIO_010081: Rock1
subclass of: SO_0000673
so part of: Rock1
location: complement(join(480393..480457,480918..480966,486564..486723,487853..488041,491361..491449,492473..492566,494144..494309,496293..496387,498342..498411,500474..500658,502284..502444,504706..504856,506461..506567,511523..511769,511862..511953,513038..513173,518383..518431,523027..523115,528463..528523,530602..530761,538212..538303,540551..540689,541539..541683,542777..542861,543753..543928,547960..548097,548580..548680,557279..557360,590969..591960))
location: region:480393-591960:-1
so has part: feature:590969-591960:-1:exon
so has part: feature:557279-557360:-1:exon
so has part: feature:548580-548680:-1:exon
so has part: feature:547960-548097:-1:exon
so has part: feature:543753-543928:-1:exon
so has part: feature:542777-542861:-1:exon
so has part: feature:541539-541683:-1:exon
so has part: feature:540551-540689:-1:exon
so has part: feature:538212-538303:-1:exon
so has part: feature:530602-530761:-1:exon
so has part: feature:528463-528523:-1:exon
so has part: feature:523027-523115:-1:exon
so has part: feature:518383-518431:-1:exon
so has part: feature:513038-513173:-1:exon
so has part: feature:511862-511953:-1:exon
so has part: feature:511523-511769:-1:exon
so has part: feature:506461-506567:-1:exon
so has part: feature:504706-504856:-1:exon
so has part: feature:502284-502444:-1:exon
so has part: feature:500474-500658:-1:exon
so has part: feature:498342-498411:-1:exon
so has part: feature:496293-496387:-1:exon
so has part: feature:494144-494309:-1:exon
so has part: feature:492473-492566:-1:exon
so has part: feature:491361-491449:-1:exon
so has part: feature:487853-488041:-1:exon
so has part: feature:486564-486723:-1:exon
so has part: feature:480918-480966:-1:exon
so has part: feature:480393-480457:-1:exon

position:480393:-1
position: 480393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590969-591960:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:557279-557360:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548580-548680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547960-548097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543753-543928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542777-542861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541539-541683:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540551-540689:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:538212-538303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:530602-530761:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:528463-528523:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523027-523115:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:518383-518431:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:513038-513173:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:511862-511953:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:511523-511769:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:506461-506567:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:504706-504856:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:502284-502444:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:500474-500658:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498342-498411:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:496293-496387:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:494144-494309:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:492473-492566:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:491361-491449:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:487853-488041:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:486564-486723:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:480918-480966:-1:exon

position:480918:-1
position: 480918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480966:-1
position: 480966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:480393-480457:-1:exon

Rock1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Rock1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-associated protein kinase 1 isoform X3
translation: MSTGDSFESRFEKIDNLLRDPKSEVNSDCLLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGDEETFPIPKAFVGNQLPFVGFTYYSNRRYLPAANPSENRTTSNVDKSLQESLQKTIYKLEEQLHNEMQLKDEMEQKCRTSNIKLDKIMKELDEEGNQRRNLESAVSQIEKEKMLLQHRINEYQRKVEQENEKRRNVENEVSTLKDQLEDLRKVSQSSQLANEKLAQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQADKDYYQLQAVLEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLERVEGERKEAQDMLNHSEKEKNNLEIDLNYKLKSLQQRLEQEVNEHKVTKACLTDKHQSIEEAKSVAMCEMEKKLKEEREARERAENRVVETEKQCSMLDVDLKQSLQKLEHMTENKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKGLEKQMKQEINTLLEAKRLLEFEFAQLTKQYRGNEGQMRELQDQLEAEQYFSTLYKTQVKELKEEIEEKNRENLRKIQELQSEKETLSTQLDLAETKAESEQLARGILEEQYFELTQESKKAASRNRQEITDKDHTVSRLEETNNMLTKDIEILRKENEELNERMRTAEEEYKLKKEEEINNLKAAFEKNISTERTLKTQAVNKLAEIMNRKDFKIDRKKANTQDLRKKEKENRKLQLELNQEREKFNQMVVKHQKELNDMQAQLVEECTHRNELQMQLASKESDIEQLRAKLLDLSDSTSVASFPSADETDGNLPVDSACIPYLFIFYSCLLVKN
SIO_010081: Rock1
subclass of: SO_0000673
so part of: Rock1
location: complement(join(480445..480457,480918..480966,486564..486723,487853..488041,491361..491449,492473..492566,494144..494309,496293..496387,498342..498411,500474..500658,502284..502444,504706..504856,506461..506567,511523..511769,511862..511953,513038..513173,518383..518431,523027..523115,528463..528523,530602..530761,538212..538303,540551..540689,541539..541683,542777..542861,543753..543928,547960..548097,548580..548680,557279..557360,590969..591061))
location: region:480445-591061:-1
so has part: feature:590969-591061:-1:exon
so has part: feature:557279-557360:-1:exon
so has part: feature:548580-548680:-1:exon
so has part: feature:547960-548097:-1:exon
so has part: feature:543753-543928:-1:exon
so has part: feature:542777-542861:-1:exon
so has part: feature:541539-541683:-1:exon
so has part: feature:540551-540689:-1:exon
so has part: feature:538212-538303:-1:exon
so has part: feature:530602-530761:-1:exon
so has part: feature:528463-528523:-1:exon
so has part: feature:523027-523115:-1:exon
so has part: feature:518383-518431:-1:exon
so has part: feature:513038-513173:-1:exon
so has part: feature:511862-511953:-1:exon
so has part: feature:511523-511769:-1:exon
so has part: feature:506461-506567:-1:exon
so has part: feature:504706-504856:-1:exon
so has part: feature:502284-502444:-1:exon
so has part: feature:500474-500658:-1:exon
so has part: feature:498342-498411:-1:exon
so has part: feature:496293-496387:-1:exon
so has part: feature:494144-494309:-1:exon
so has part: feature:492473-492566:-1:exon
so has part: feature:491361-491449:-1:exon
so has part: feature:487853-488041:-1:exon
so has part: feature:486564-486723:-1:exon
so has part: feature:480918-480966:-1:exon
so has part: feature:480445-480457:-1:exon

XP_036060622.1
type: Protein
SIO_000068: ncbiprotein

position:480445:-1
position: 480445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590969-591061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:557279-557360:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548580-548680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547960-548097:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543753-543928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542777-542861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541539-541683:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540551-540689:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:538212-538303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:530602-530761:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:528463-528523:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523027-523115:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:518383-518431:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:513038-513173:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:511862-511953:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:511523-511769:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:506461-506567:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:504706-504856:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:502284-502444:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:500474-500658:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:498342-498411:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:496293-496387:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:494144-494309:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:492473-492566:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:491361-491449:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:487853-488041:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:486564-486723:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:480918-480966:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:480445-480457:-1:exon

LOC118594909
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 630972..632660
location: region:630972-632660:1
so has part: feature:630972-632660:1:exon

118594909
type: Gene
SIO_000068: ncbigene

position:630972:1
position: 630972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632660:1
position: 632660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630972-632660:1:exon

LOC118594909
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118594909
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118594909
subclass of: SO_0000673
so part of: LOC118594909
location: 630972..632660
location: region:630972-632660:1
so has part: feature:630972-632660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:630972-632660:1:exon

Greb1l
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Greb1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 813936..946928
location: region:813936-946928:1
so has part: feature:813936-946928:1:exon
subclass of: SO_0000010

118594420
type: Gene
SIO_000068: ncbigene

position:813936:1
position: 813936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946928:1
position: 946928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813936-946928:1:exon

Greb1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Greb1l
product: GREB1 like retinoic acid receptor coactivator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036204260.1
SIO_010081: Greb1l
subclass of: SO_0000673
so part of: Greb1l
location: join(813936..813974,826161..826320,826519..826716,838880..839056,844842..845018,847404..847526,871317..871433,872348..872467,873373..873510,875325..875510,879126..879452,880733..880861,881429..881563,885331..885528,900268..900448,901390..901582,906530..906660,909337..909676,918308..918423,919244..919488,923808..924379,924563..924665,927145..927300,927574..927713,929378..929539,929687..929891,937437..937602,938865..939092,939910..940051,941372..941572,943649..943787,945020..946928)
location: region:813936-946928:1
so has part: feature:813936-813974:1:exon
so has part: feature:826161-826320:1:exon
so has part: feature:826519-826716:1:exon
so has part: feature:838880-839056:1:exon
so has part: feature:844842-845018:1:exon
so has part: feature:847404-847526:1:exon
so has part: feature:871317-871433:1:exon
so has part: feature:872348-872467:1:exon
so has part: feature:873373-873510:1:exon
so has part: feature:875325-875510:1:exon
so has part: feature:879126-879452:1:exon
so has part: feature:880733-880861:1:exon
so has part: feature:881429-881563:1:exon
so has part: feature:885331-885528:1:exon
so has part: feature:900268-900448:1:exon
so has part: feature:901390-901582:1:exon
so has part: feature:906530-906660:1:exon
so has part: feature:909337-909676:1:exon
so has part: feature:918308-918423:1:exon
so has part: feature:919244-919488:1:exon
so has part: feature:923808-924379:1:exon
so has part: feature:924563-924665:1:exon
so has part: feature:927145-927300:1:exon
so has part: feature:927574-927713:1:exon
so has part: feature:929378-929539:1:exon
so has part: feature:929687-929891:1:exon
so has part: feature:937437-937602:1:exon
so has part: feature:938865-939092:1:exon
so has part: feature:939910-940051:1:exon
so has part: feature:941372-941572:1:exon
so has part: feature:943649-943787:1:exon
so has part: feature:945020-946928:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:813936-813974:1:exon

position:813974:1
position: 813974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:826161-826320:1:exon

position:826161:1
position: 826161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826320:1
position: 826320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:826519-826716:1:exon

position:826519:1
position: 826519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826716:1
position: 826716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:838880-839056:1:exon

position:838880:1
position: 838880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839056:1
position: 839056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:844842-845018:1:exon

position:844842:1
position: 844842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845018:1
position: 845018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:847404-847526:1:exon

position:847404:1
position: 847404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847526:1
position: 847526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:871317-871433:1:exon

position:871317:1
position: 871317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871433:1
position: 871433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:872348-872467:1:exon

position:872348:1
position: 872348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872467:1
position: 872467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:873373-873510:1:exon

position:873373:1
position: 873373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873510:1
position: 873510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:875325-875510:1:exon

position:875325:1
position: 875325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875510:1
position: 875510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:879126-879452:1:exon

position:879126:1
position: 879126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879452:1
position: 879452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:880733-880861:1:exon

position:880733:1
position: 880733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880861:1
position: 880861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:881429-881563:1:exon

position:881429:1
position: 881429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881563:1
position: 881563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:885331-885528:1:exon

position:885331:1
position: 885331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885528:1
position: 885528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:900268-900448:1:exon

position:900268:1
position: 900268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900448:1
position: 900448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:901390-901582:1:exon

position:901390:1
position: 901390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901582:1
position: 901582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:906530-906660:1:exon

position:906530:1
position: 906530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906660:1
position: 906660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:909337-909676:1:exon

position:909337:1
position: 909337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909676:1
position: 909676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:918308-918423:1:exon

position:918308:1
position: 918308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918423:1
position: 918423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:919244-919488:1:exon

position:919244:1
position: 919244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919488:1
position: 919488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:923808-924379:1:exon

position:923808:1
position: 923808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924379:1
position: 924379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:924563-924665:1:exon

position:924563:1
position: 924563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924665:1
position: 924665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:927145-927300:1:exon

position:927145:1
position: 927145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927300:1
position: 927300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:927574-927713:1:exon

position:927574:1
position: 927574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927713:1
position: 927713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:929378-929539:1:exon

position:929378:1
position: 929378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929539:1
position: 929539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:929687-929891:1:exon

position:929687:1
position: 929687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929891:1
position: 929891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:937437-937602:1:exon

position:937437:1
position: 937437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937602:1
position: 937602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:938865-939092:1:exon

position:938865:1
position: 938865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939092:1
position: 939092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:939910-940051:1:exon

position:939910:1
position: 939910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940051:1
position: 940051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:941372-941572:1:exon

position:941372:1
position: 941372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941572:1
position: 941572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:943649-943787:1:exon

position:943649:1
position: 943649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943787:1
position: 943787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:945020-946928:1:exon

position:945020:1
position: 945020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Greb1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Greb1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GREB1-like protein
translation: MGNSYAGQLKSARFEEALHNSIEASLRCSSVVPRPIFSQLYLDPDQHPFSSADVKPKVEDLDKDLVHRYTQNGSLDFSNNVAINEMEDDDDEEEMSDSNSPPIPYSQKPAPEGSCTTDGFCQAGKDLRLVSLCMEQIDIPAGFLLVGAKSPNLPEHILVCAVDKRFLPDDHGKNALLGFSGNCIGCGERGFRYFTEFSNHINLKLTTQPKKQKHLKYYLVRTSQGVLSKGPLICWKECRSRQSSAVCHSTKPISSVSSAVAPENGTANGYKAGFTQTEAANGATSHGGKSGTSSSTPSRPGNYSLSPRPSYTSIDQANMFISGPPKKRHRGWYPGSPVSQPALVVPVPTVRPLSRTEPLLPSQVPQTPLTGILQPRPVPAGETVIVPENLLSNSGVRPVILIGYGTLPYFYGNVGDIVVSPLLVNCYKVPQLENKDLEQLGLTSTQLLSVENMILLTIQYLVRLGPDQIPLREEFEQIILRAMQEFAVRERTLQMGVPCTPVSPGQLPWLARLAASVSQDMVHVIVTQNSLAEGISETLRLLSEGKHYQRLPDYVVAICASKIRGNEFCVVVLGQHQSRALAESMLTTSEFLKEISYELITGKVSFLASHFKTTSLGDDLDKLLEKMQQRRGDSVVTPFNGDLKECVSPQEAAAMIPTQNLDVDNETFQIYQPQLTVARRLLSQVCTIADSGSQSLDLGHFSKVDFIIIVPRSEVLVQQTLQRVRQSGVLVDLGLEENGMAHQRAEKYVVRLDNDIQSKFEVFMRRVKQNPYTLFVLVHDNSHVELTSVVSGSLSHGEPTHGLADRVINCREVLEAFNLLVLQVSSFPYTLQTQQSRISTSNEVHWIQLDTMEDVGCEKLYFGLNEYSKSLQWGITSPLLRFDETFEKMVSTLLERYPRLHSMVVRCYLLIQQYSEALMALTTMASLRDHSTPETLSIMDDLLSCPGKTKSGRGHMLVIRVPSVQLAMLAKERLQEVRDKLGLQYRFEIILGNPVSELHIATHFVARLKTWRGNDQEDWLPRTYQDLEGLPCIVILTGKDPLGETFPRSLKYCDLRLIDSSYLTRTALEQEVGLACCYVSKEVIRGPAAALDLSGKEAERAPTSENDSEELFIDLERPQSNSSAVTGTSGSIMENGVSSSSTDKSQQQPPTPTFQSPTPSVRLDEGVSASTAVTGESLKQECDSVGLPMTSSTTSKPSSSSSSSAQPLAWSGQPPRGCRGLHTALPPVVILSKAAYSLLGSQKGGRLPPSSSLLPHADVAWVSSLRPGLHKDMSSEEQSLFYRQWTSARQHHADHSNQPDPASGSRTLHPRRLLLTGPPQVGKTGSYLQFLRILFRMLIRLLEVDVYDEEEINTDHSENSGASQSEGEPWPDIETFSKMPFDLSVHDPKYSLMSLVYTEKLAGIKQEVIKEYKVEEPGKRETMSIMLTKYAAYNTFHHCEQCQQYMDFTPTSQMSDSTLHAFTFSSSMLGEEVQLYFIIPKSKESHFVFSKQGRHLESMRLPLVSDKNLNAVKSPIFTPSSGRHEHGLLNLFHAMEGISHLHLLVVKEYEMPLYRKYWPNHIMLVLPGMFNNAGVGAARFLIKELSYHNLELERNRLEELGVKRQCVWPFIVVMDDSCVLWNIHSVQEQTSQPTEAGISSKNVSLKSVLQHIEATPKIVHYAILGIQKWNSKLTSQNLKAPFSRCHVHDFILLNIDLTQNVQYDFNRYFCEDVDFNLRTNSSGLLICRFNNFSLMKKHVQVGGQRDFIIKPKIMVSESFAPILPLQYVCAPDSEHTLLAAPAQFLLEKFLQHASYKLFPKAIHNFKCPVLAIDCYLNIGQEVAICYVSSRPHSSNVNCEGVFFSGLLLYLCDSFVGADLLKKFKFLKGATLCVICQDRSSLRQTIVRLELEDQWQFRLRDEFQTANSSDDKPLYFLTGRHV
SIO_010081: Greb1l
subclass of: SO_0000673
so part of: Greb1l
location: join(826164..826320,826519..826716,838880..839056,844842..845018,847404..847526,871317..871433,872348..872467,873373..873510,875325..875510,879126..879452,880733..880861,881429..881563,885331..885528,900268..900448,901390..901582,906530..906660,909337..909676,918308..918423,919244..919488,923808..924379,924563..924665,927145..927300,927574..927713,929378..929539,929687..929891,937437..937602,938865..939092,939910..940051,941372..941572,943649..943787,945020..945183)
location: region:826164-945183:1
so has part: feature:826164-826320:1:exon
so has part: feature:826519-826716:1:exon
so has part: feature:838880-839056:1:exon
so has part: feature:844842-845018:1:exon
so has part: feature:847404-847526:1:exon
so has part: feature:871317-871433:1:exon
so has part: feature:872348-872467:1:exon
so has part: feature:873373-873510:1:exon
so has part: feature:875325-875510:1:exon
so has part: feature:879126-879452:1:exon
so has part: feature:880733-880861:1:exon
so has part: feature:881429-881563:1:exon
so has part: feature:885331-885528:1:exon
so has part: feature:900268-900448:1:exon
so has part: feature:901390-901582:1:exon
so has part: feature:906530-906660:1:exon
so has part: feature:909337-909676:1:exon
so has part: feature:918308-918423:1:exon
so has part: feature:919244-919488:1:exon
so has part: feature:923808-924379:1:exon
so has part: feature:924563-924665:1:exon
so has part: feature:927145-927300:1:exon
so has part: feature:927574-927713:1:exon
so has part: feature:929378-929539:1:exon
so has part: feature:929687-929891:1:exon
so has part: feature:937437-937602:1:exon
so has part: feature:938865-939092:1:exon
so has part: feature:939910-940051:1:exon
so has part: feature:941372-941572:1:exon
so has part: feature:943649-943787:1:exon
so has part: feature:945020-945183:1:exon

XP_036060153.1
type: Protein
SIO_000068: ncbiprotein

position:826164:1
position: 826164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945183:1
position: 945183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826164-826320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826519-826716:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838880-839056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:844842-845018:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:847404-847526:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:871317-871433:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:872348-872467:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873373-873510:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:875325-875510:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:879126-879452:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:880733-880861:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:881429-881563:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:885331-885528:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:900268-900448:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:901390-901582:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:906530-906660:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:909337-909676:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:918308-918423:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:919244-919488:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:923808-924379:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:924563-924665:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:927145-927300:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:927574-927713:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:929378-929539:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:929687-929891:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:937437-937602:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:938865-939092:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:939910-940051:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:941372-941572:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:943649-943787:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:945020-945183:1:exon

LOC118595093
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118595093
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(931685..931817)
location: region:931685-931817:-1
so has part: feature:931685-931817:-1:exon
subclass of: SO_0000578

118595093
type: Gene
SIO_000068: ncbigene

position:931685:-1
position: 931685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931817:-1
position: 931817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931685-931817:-1:exon

LOC118595093
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: snoRNA
gene: LOC118595093
product: small nucleolar RNA SNORA33
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00438
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004946466.1
SIO_010081: LOC118595093
subclass of: SO_0000673
so part of: LOC118595093
location: complement(931685..931817)
location: region:931685-931817:-1
so has part: feature:931685-931817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:931685-931817:-1:exon

Esco1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Esco1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(950697..1011187)
location: region:950697-1011187:-1
so has part: feature:950697-1011187:-1:exon
subclass of: SO_0000010

118594804
type: Gene
SIO_000068: ncbigene

position:950697:-1
position: 950697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011187:-1
position: 1011187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950697-1011187:-1:exon

Esco1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Esco1
product: establishment of sister chromatid cohesion N-acetyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205003.1
SIO_010081: Esco1
subclass of: SO_0000673
so part of: Esco1
location: complement(join(950697..951897,956933..957120,959603..959746,962807..962896,974862..974993,977209..977323,980277..980340,982878..982989,987054..989182,989641..989740,994811..994895,1010830..1011185))
location: region:950697-1011185:-1
so has part: feature:1010830-1011185:-1:exon
so has part: feature:994811-994895:-1:exon
so has part: feature:989641-989740:-1:exon
so has part: feature:987054-989182:-1:exon
so has part: feature:982878-982989:-1:exon
so has part: feature:980277-980340:-1:exon
so has part: feature:977209-977323:-1:exon
so has part: feature:974862-974993:-1:exon
so has part: feature:962807-962896:-1:exon
so has part: feature:959603-959746:-1:exon
so has part: feature:956933-957120:-1:exon
so has part: feature:950697-951897:-1:exon

position:1011185:-1
position: 1011185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010830-1011185:-1:exon

position:1010830:-1
position: 1010830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:994811-994895:-1:exon

position:994811:-1
position: 994811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994895:-1
position: 994895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:989641-989740:-1:exon

position:989641:-1
position: 989641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989740:-1
position: 989740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:987054-989182:-1:exon

position:987054:-1
position: 987054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989182:-1
position: 989182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:982878-982989:-1:exon

position:982878:-1
position: 982878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982989:-1
position: 982989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:980277-980340:-1:exon

position:980277:-1
position: 980277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980340:-1
position: 980340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:977209-977323:-1:exon

position:977209:-1
position: 977209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977323:-1
position: 977323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:974862-974993:-1:exon

position:974862:-1
position: 974862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974993:-1
position: 974993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:962807-962896:-1:exon

position:962807:-1
position: 962807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962896:-1
position: 962896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:959603-959746:-1:exon

position:959603:-1
position: 959603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959746:-1
position: 959746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:956933-957120:-1:exon

position:956933:-1
position: 956933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957120:-1
position: 957120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:950697-951897:-1:exon

position:951897:-1
position: 951897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Esco1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Esco1
product: establishment of sister chromatid cohesion N-acetyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_036205004.1
SIO_010081: Esco1
subclass of: SO_0000673
so part of: Esco1
location: complement(join(950697..951897,956933..957120,959603..959746,962807..962896,974862..974993,977209..977323,980277..980340,982878..982989,987054..989182,989641..989740,994811..994895,1003578..1003703))
location: region:950697-1003703:-1
so has part: feature:1003578-1003703:-1:exon
so has part: feature:994811-994895:-1:exon
so has part: feature:989641-989740:-1:exon
so has part: feature:987054-989182:-1:exon
so has part: feature:982878-982989:-1:exon
so has part: feature:980277-980340:-1:exon
so has part: feature:977209-977323:-1:exon
so has part: feature:974862-974993:-1:exon
so has part: feature:962807-962896:-1:exon
so has part: feature:959603-959746:-1:exon
so has part: feature:956933-957120:-1:exon
so has part: feature:950697-951897:-1:exon

position:1003703:-1
position: 1003703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003578-1003703:-1:exon

position:1003578:-1
position: 1003578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:994811-994895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:989641-989740:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:987054-989182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:982878-982989:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980277-980340:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:977209-977323:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:974862-974993:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:962807-962896:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:959603-959746:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:956933-957120:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:950697-951897:-1:exon

Esco1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Esco1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetyltransferase ESCO1 isoform X1
translation: MSIQEKSKQNSSKVTKEIEDENLELEIQSSQNSLAKKPGSKEAVKALVRSSNESKINQPELGTRMNTRSASAADKNATKSINNNMVTVKGQSQESTKKKRLYQEKLVLGTFKGNEQLNRRSQRLQQLSECSTRSLRSREIQSQIQAIKQNLQPTRREQCNSTQSKSNKVTVNQKHVKRKVLEIKSDCKEDRNSVTNEVINSPKGKKLKVQHETAYTCSSQCIPGSEKCFQKTVRKEESKPVPVTSEIRKLKTATSVVSQKNEPRKSAHTPVNTSTKSPQFPQPLVPEQSIDPELEQAGKSKRGTILQLCEEIAGEIESDTVEVKREWSHVESVKEEKPLEVKPEGTDAERQMLHQKETNQDVQCNRFFPSRKTKPVKCILNGINSSTKRNSNWTKIKLSKFNSVQQHKLDSQVSPKLGLLRTGFSPPVLEMPHPVSQSTFLEMKPHSNVTCQQDKMKGIKSEEVKINNIAIEINKATKGAPGNCHLDNHIKPSPDSPLDNQMKHSCESAPDKNFSLCSASEVENSSLEDTAAASALPNQAKIDGDRKFPGSAPKQPHSVLSNEASINSKPRAIPPNHSQLKYNSHLEITIPKALKLRDSEKVDEKQLVIDAGHKRFGAVSCNVCGMLYTASNPEDETQHLLFHNQFISAVKYVGWKKERILAEYPDGKIIMVLPEDPKYALKKVDEIREMVDNDLGFQQAPLMCYSRTKTLLFISNDKKVVGCLIAEHIQWGYRVIEEKLPVIRSEEEKVRFERQKAWCCSTLPEPAICGISRIWVFSMMRRKKIASRMIECLRSNFIYGSYLSKEEIAFSDPTPDGKLFATQYCGTGQFLVYNFINGQNTT
SIO_010081: Esco1
subclass of: SO_0000673
so part of: Esco1
location: complement(join(951750..951897,956933..957120,959603..959746,962807..962896,974862..974993,977209..977323,980277..980340,982878..982989,987054..988589))
location: region:951750-988589:-1
so has part: feature:987054-988589:-1:exon
so has part: feature:982878-982989:-1:exon
so has part: feature:980277-980340:-1:exon
so has part: feature:977209-977323:-1:exon
so has part: feature:974862-974993:-1:exon
so has part: feature:962807-962896:-1:exon
so has part: feature:959603-959746:-1:exon
so has part: feature:956933-957120:-1:exon
so has part: feature:951750-951897:-1:exon

XP_036060896.1
type: Protein
SIO_000068: ncbiprotein

position:951750:-1
position: 951750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988589:-1
position: 988589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:987054-988589:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:982878-982989:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:980277-980340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977209-977323:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:974862-974993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962807-962896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:959603-959746:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956933-957120:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:951750-951897:-1:exon

Esco1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Esco1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetyltransferase ESCO1 isoform X1
translation: MSIQEKSKQNSSKVTKEIEDENLELEIQSSQNSLAKKPGSKEAVKALVRSSNESKINQPELGTRMNTRSASAADKNATKSINNNMVTVKGQSQESTKKKRLYQEKLVLGTFKGNEQLNRRSQRLQQLSECSTRSLRSREIQSQIQAIKQNLQPTRREQCNSTQSKSNKVTVNQKHVKRKVLEIKSDCKEDRNSVTNEVINSPKGKKLKVQHETAYTCSSQCIPGSEKCFQKTVRKEESKPVPVTSEIRKLKTATSVVSQKNEPRKSAHTPVNTSTKSPQFPQPLVPEQSIDPELEQAGKSKRGTILQLCEEIAGEIESDTVEVKREWSHVESVKEEKPLEVKPEGTDAERQMLHQKETNQDVQCNRFFPSRKTKPVKCILNGINSSTKRNSNWTKIKLSKFNSVQQHKLDSQVSPKLGLLRTGFSPPVLEMPHPVSQSTFLEMKPHSNVTCQQDKMKGIKSEEVKINNIAIEINKATKGAPGNCHLDNHIKPSPDSPLDNQMKHSCESAPDKNFSLCSASEVENSSLEDTAAASALPNQAKIDGDRKFPGSAPKQPHSVLSNEASINSKPRAIPPNHSQLKYNSHLEITIPKALKLRDSEKVDEKQLVIDAGHKRFGAVSCNVCGMLYTASNPEDETQHLLFHNQFISAVKYVGWKKERILAEYPDGKIIMVLPEDPKYALKKVDEIREMVDNDLGFQQAPLMCYSRTKTLLFISNDKKVVGCLIAEHIQWGYRVIEEKLPVIRSEEEKVRFERQKAWCCSTLPEPAICGISRIWVFSMMRRKKIASRMIECLRSNFIYGSYLSKEEIAFSDPTPDGKLFATQYCGTGQFLVYNFINGQNTT
SIO_010081: Esco1
subclass of: SO_0000673
so part of: Esco1
location: complement(join(951750..951897,956933..957120,959603..959746,962807..962896,974862..974993,977209..977323,980277..980340,982878..982989,987054..988589))
location: region:951750-988589:-1
so has part: feature:987054-988589:-1:exon
so has part: feature:982878-982989:-1:exon
so has part: feature:980277-980340:-1:exon
so has part: feature:977209-977323:-1:exon
so has part: feature:974862-974993:-1:exon
so has part: feature:962807-962896:-1:exon
so has part: feature:959603-959746:-1:exon
so has part: feature:956933-957120:-1:exon
so has part: feature:951750-951897:-1:exon

XP_036060897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:987054-988589:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:982878-982989:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:980277-980340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977209-977323:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:974862-974993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962807-962896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:959603-959746:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956933-957120:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:951750-951897:-1:exon

Esco1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Esco1
product: establishment of sister chromatid cohesion N-acetyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_036205005.1
SIO_010081: Esco1
subclass of: SO_0000673
so part of: Esco1
location: complement(join(962811..962896,963440..963563,974862..974993,977209..977323,980277..980340,982878..982989,987054..989182,989641..989740,994811..994895,1010830..1011187))
location: region:962811-1011187:-1
so has part: feature:1010830-1011187:-1:exon
so has part: feature:994811-994895:-1:exon
so has part: feature:989641-989740:-1:exon
so has part: feature:987054-989182:-1:exon
so has part: feature:982878-982989:-1:exon
so has part: feature:980277-980340:-1:exon
so has part: feature:977209-977323:-1:exon
so has part: feature:974862-974993:-1:exon
so has part: feature:963440-963563:-1:exon
so has part: feature:962811-962896:-1:exon

position:962811:-1
position: 962811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010830-1011187:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:994811-994895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:989641-989740:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:987054-989182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:982878-982989:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980277-980340:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:977209-977323:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:974862-974993:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963440-963563:-1:exon

position:963440:-1
position: 963440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963563:-1
position: 963563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:962811-962896:-1:exon

Esco1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Esco1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetyltransferase ESCO1 isoform X2
translation: MSIQEKSKQNSSKVTKEIEDENLELEIQSSQNSLAKKPGSKEAVKALVRSSNESKINQPELGTRMNTRSASAADKNATKSINNNMVTVKGQSQESTKKKRLYQEKLVLGTFKGNEQLNRRSQRLQQLSECSTRSLRSREIQSQIQAIKQNLQPTRREQCNSTQSKSNKVTVNQKHVKRKVLEIKSDCKEDRNSVTNEVINSPKGKKLKVQHETAYTCSSQCIPGSEKCFQKTVRKEESKPVPVTSEIRKLKTATSVVSQKNEPRKSAHTPVNTSTKSPQFPQPLVPEQSIDPELEQAGKSKRGTILQLCEEIAGEIESDTVEVKREWSHVESVKEEKPLEVKPEGTDAERQMLHQKETNQDVQCNRFFPSRKTKPVKCILNGINSSTKRNSNWTKIKLSKFNSVQQHKLDSQVSPKLGLLRTGFSPPVLEMPHPVSQSTFLEMKPHSNVTCQQDKMKGIKSEEVKINNIAIEINKATKGAPGNCHLDNHIKPSPDSPLDNQMKHSCESAPDKNFSLCSASEVENSSLEDTAAASALPNQAKIDGDRKFPGSAPKQPHSVLSNEASINSKPRAIPPNHSQLKYNSHLEITIPKALKLRDSEKVDEKQLVIDAGHKRFGAVSCNVCGMLYTASNPEDETQHLLFHNQFISAVKYVVLLINHHECGSEEEFISSLFLSMSNFRYTQRSLSFPIRFLEGLEKRKNSG
SIO_010081: Esco1
subclass of: SO_0000673
so part of: Esco1
location: complement(join(962868..962896,963440..963563,974862..974993,977209..977323,980277..980340,982878..982989,987054..988589))
location: region:962868-988589:-1
so has part: feature:987054-988589:-1:exon
so has part: feature:982878-982989:-1:exon
so has part: feature:980277-980340:-1:exon
so has part: feature:977209-977323:-1:exon
so has part: feature:974862-974993:-1:exon
so has part: feature:963440-963563:-1:exon
so has part: feature:962868-962896:-1:exon

XP_036060898.1
type: Protein
SIO_000068: ncbiprotein

position:962868:-1
position: 962868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:987054-988589:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:982878-982989:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:980277-980340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977209-977323:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:974862-974993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:963440-963563:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962868-962896:-1:exon

LOC118594805
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 968030..968447
location: region:968030-968447:1
so has part: feature:968030-968447:1:exon

118594805
type: Gene
SIO_000068: ncbigene

position:968030:1
position: 968030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968447:1
position: 968447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:968030-968447:1:exon

LOC118594805
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118594805
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
pseudo: true
SIO_010081: LOC118594805
subclass of: SO_0000673
so part of: LOC118594805
location: 968030..968447
location: region:968030-968447:1
so has part: feature:968030-968447:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:968030-968447:1:exon

Snrpd1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Snrpd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1023725..1042465
location: region:1023725-1042465:1
so has part: feature:1023725-1042465:1:exon
subclass of: SO_0000010

118594773
type: Gene
SIO_000068: ncbigene

position:1023725:1
position: 1023725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042465:1
position: 1042465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023725-1042465:1:exon

Snrpd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Snrpd1
product: small nuclear ribonucleoprotein D1 polypeptide
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036204952.1
SIO_010081: Snrpd1
subclass of: SO_0000673
so part of: Snrpd1
location: join(1023725..1023846,1029977..1030053,1037420..1037611,1042080..1042465)
location: region:1023725-1042465:1
so has part: feature:1023725-1023846:1:exon
so has part: feature:1029977-1030053:1:exon
so has part: feature:1037420-1037611:1:exon
so has part: feature:1042080-1042465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1023725-1023846:1:exon

position:1023846:1
position: 1023846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1029977-1030053:1:exon

position:1029977:1
position: 1029977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030053:1
position: 1030053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1037420-1037611:1:exon

position:1037420:1
position: 1037420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037611:1
position: 1037611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1042080-1042465:1:exon

position:1042080:1
position: 1042080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Snrpd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Snrpd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small nuclear ribonucleoprotein Sm D1
translation: MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
SIO_010081: Snrpd1
subclass of: SO_0000673
so part of: Snrpd1
location: join(1023833..1023846,1029977..1030053,1037420..1037611,1042080..1042156)
location: region:1023833-1042156:1
so has part: feature:1023833-1023846:1:exon
so has part: feature:1029977-1030053:1:exon
so has part: feature:1037420-1037611:1:exon
so has part: feature:1042080-1042156:1:exon

XP_036060845.1
type: Protein
SIO_000068: ncbiprotein

position:1023833:1
position: 1023833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042156:1
position: 1042156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023833-1023846:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029977-1030053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1037420-1037611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042080-1042156:1:exon

Abhd3
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Abhd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1093216..1138374)
location: region:1093216-1138374:-1
so has part: feature:1093216-1138374:-1:exon
subclass of: SO_0000010

118594869
type: Gene
SIO_000068: ncbigene

position:1093216:-1
position: 1093216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138374:-1
position: 1138374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093216-1138374:-1:exon

Abhd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Abhd3
product: abhydrolase domain containing 3, phospholipase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205099.1
SIO_010081: Abhd3
subclass of: SO_0000673
so part of: Abhd3
location: complement(join(1093216..1094018,1097914..1098079,1098158..1098206,1100512..1100685,1105842..1105954,1115302..1115347,1136268..1136450,1137591..1137754,1138133..1138374))
location: region:1093216-1138374:-1
so has part: feature:1138133-1138374:-1:exon
so has part: feature:1137591-1137754:-1:exon
so has part: feature:1136268-1136450:-1:exon
so has part: feature:1115302-1115347:-1:exon
so has part: feature:1105842-1105954:-1:exon
so has part: feature:1100512-1100685:-1:exon
so has part: feature:1098158-1098206:-1:exon
so has part: feature:1097914-1098079:-1:exon
so has part: feature:1093216-1094018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1138133-1138374:-1:exon

position:1138133:-1
position: 1138133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1137591-1137754:-1:exon

position:1137591:-1
position: 1137591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137754:-1
position: 1137754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1136268-1136450:-1:exon

position:1136268:-1
position: 1136268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136450:-1
position: 1136450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1115302-1115347:-1:exon

position:1115302:-1
position: 1115302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115347:-1
position: 1115347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1105842-1105954:-1:exon

position:1105842:-1
position: 1105842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105954:-1
position: 1105954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1100512-1100685:-1:exon

position:1100512:-1
position: 1100512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100685:-1
position: 1100685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1098158-1098206:-1:exon

position:1098158:-1
position: 1098158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1098206:-1
position: 1098206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1097914-1098079:-1:exon

position:1097914:-1
position: 1097914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1098079:-1
position: 1098079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1093216-1094018:-1:exon

position:1094018:-1
position: 1094018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Abhd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Abhd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase ABHD3
translation: MQRLAMDLRVLSRELALYLEHQVRVGFFGSGVGLSLILGFSVAYACYYLSSIAKKPQLVTGGESFSRFLQDHCPVVTETYYPTVWCWESRGQTLLRPFITAKPLVQYRNELIKTADGGQISLDWSDNNNSSCYMDASTRPTILLLPGLTGTSKESYILHMIHLSKELGYRCVVFNNRGVAGENLLTPRTYCCANTEDLETVIQHVHSLYPLAPFLAAGVSMGGMLLLNYLGKIGSKTPLMAAATFSVGWNTFACSESLEKPLNWLLFNYYLTTCLQSSVKKHQHMFVKQIDMDQVMKAKSIREFDKRFTSVMFGYRTIDDYYMDASPNRRLKSVGIPVLCLNAVDDVFSPSHAIPIETAKQNPNVALVLTSYGGHIGFLEGIWPRQCTYMDRVFKQFVQAMVEHGHELSDM
SIO_010081: Abhd3
subclass of: SO_0000673
so part of: Abhd3
location: complement(join(1093840..1094018,1097914..1098079,1098158..1098206,1100512..1100685,1105842..1105954,1115302..1115347,1136268..1136450,1137591..1137754,1138133..1138294))
location: region:1093840-1138294:-1
so has part: feature:1138133-1138294:-1:exon
so has part: feature:1137591-1137754:-1:exon
so has part: feature:1136268-1136450:-1:exon
so has part: feature:1115302-1115347:-1:exon
so has part: feature:1105842-1105954:-1:exon
so has part: feature:1100512-1100685:-1:exon
so has part: feature:1098158-1098206:-1:exon
so has part: feature:1097914-1098079:-1:exon
so has part: feature:1093840-1094018:-1:exon

XP_036060992.1
type: Protein
SIO_000068: ncbiprotein

position:1093840:-1
position: 1093840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138294:-1
position: 1138294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1138133-1138294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137591-1137754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1136268-1136450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1115302-1115347:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1105842-1105954:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1100512-1100685:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098158-1098206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1097914-1098079:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1093840-1094018:-1:exon

Mib1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Mib1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1176492..1287902
location: region:1176492-1287902:1
so has part: feature:1176492-1287902:1:exon
subclass of: SO_0000010

118594428
type: Gene
SIO_000068: ncbigene

position:1176492:1
position: 1176492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287902:1
position: 1287902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176492-1287902:1:exon

Mib1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Mib1
product: mindbomb E3 ubiquitin protein ligase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_036204271.1
SIO_010081: Mib1
subclass of: SO_0000673
so part of: Mib1
location: join(1176492..1177398,1206385..1206556,1208475..1208604,1214247..1214351,1216920..1216986,1218822..1219026,1220880..1221063,1226652..1226796,1228741..1228874,1234410..1234517,1243589..1243786,1244782..1244933,1261899..1262031,1263662..1263748,1265070..1265231,1268157..1268338,1270751..1270943,1272547..1272625,1276358..1276471,1277799..1277899,1281407..1281578,1287132..1287902)
location: region:1176492-1287902:1
so has part: feature:1176492-1177398:1:exon
so has part: feature:1206385-1206556:1:exon
so has part: feature:1208475-1208604:1:exon
so has part: feature:1214247-1214351:1:exon
so has part: feature:1216920-1216986:1:exon
so has part: feature:1218822-1219026:1:exon
so has part: feature:1220880-1221063:1:exon
so has part: feature:1226652-1226796:1:exon
so has part: feature:1228741-1228874:1:exon
so has part: feature:1234410-1234517:1:exon
so has part: feature:1243589-1243786:1:exon
so has part: feature:1244782-1244933:1:exon
so has part: feature:1261899-1262031:1:exon
so has part: feature:1263662-1263748:1:exon
so has part: feature:1265070-1265231:1:exon
so has part: feature:1268157-1268338:1:exon
so has part: feature:1270751-1270943:1:exon
so has part: feature:1272547-1272625:1:exon
so has part: feature:1276358-1276471:1:exon
so has part: feature:1277799-1277899:1:exon
so has part: feature:1281407-1281578:1:exon
so has part: feature:1287132-1287902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1176492-1177398:1:exon

position:1177398:1
position: 1177398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1206385-1206556:1:exon

position:1206385:1
position: 1206385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1206556:1
position: 1206556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1208475-1208604:1:exon

position:1208475:1
position: 1208475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1208604:1
position: 1208604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1214247-1214351:1:exon

position:1214247:1
position: 1214247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214351:1
position: 1214351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1216920-1216986:1:exon

position:1216920:1
position: 1216920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216986:1
position: 1216986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1218822-1219026:1:exon

position:1218822:1
position: 1218822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219026:1
position: 1219026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1220880-1221063:1:exon

position:1220880:1
position: 1220880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221063:1
position: 1221063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1226652-1226796:1:exon

position:1226652:1
position: 1226652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226796:1
position: 1226796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1228741-1228874:1:exon

position:1228741:1
position: 1228741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228874:1
position: 1228874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1234410-1234517:1:exon

position:1234410:1
position: 1234410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234517:1
position: 1234517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1243589-1243786:1:exon

position:1243589:1
position: 1243589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243786:1
position: 1243786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1244782-1244933:1:exon

position:1244782:1
position: 1244782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244933:1
position: 1244933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1261899-1262031:1:exon

position:1261899:1
position: 1261899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262031:1
position: 1262031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1263662-1263748:1:exon

position:1263662:1
position: 1263662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263748:1
position: 1263748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1265070-1265231:1:exon

position:1265070:1
position: 1265070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1265231:1
position: 1265231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1268157-1268338:1:exon

position:1268157:1
position: 1268157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268338:1
position: 1268338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1270751-1270943:1:exon

position:1270751:1
position: 1270751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270943:1
position: 1270943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1272547-1272625:1:exon

position:1272547:1
position: 1272547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272625:1
position: 1272625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1276358-1276471:1:exon

position:1276358:1
position: 1276358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276471:1
position: 1276471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1277799-1277899:1:exon

position:1277799:1
position: 1277799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277899:1
position: 1277899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1281407-1281578:1:exon

position:1281407:1
position: 1281407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281578:1
position: 1281578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1287132-1287902:1:exon

position:1287132:1
position: 1287132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mib1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Mib1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MIB1
translation: MSNSRNNRVMVEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANYRCSGAYDLRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHLRHRFYRITTPGSERVLLESRRKSKKITARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTEIQDWSASSPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGNRNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPSGNRWTFNPAVLTKANIVRSGDAAQGAEGGTSQFQVGDLVQVCYDLERIKLLQRGHGEWAEAMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVSKVASAGSAISNASGERLSQLLKKLFETQESGDLNEELVKAAANGDVAKVEDLLKRPDVDVNGQCAGHTAMQAASQNGHVDILKLLLKQNVDVEAEDKDGDRAVHHAAFGDEGAVIEVLHRGSADLNARNKRRQTPLHIAVNKGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDILAVLLEAGADVTITNNNGFNALHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNANLDIQNVNQQTALHLAVERQHTQIVRLLVRAGAKLDIQDKDGDTPLHEALRHHTLSQLRQLQDMQDVGKVDAAWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLSIRNKKGQSPLDLCPDPSLCKALAKCHKEKVSGQVGSRSPSMISNDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRAVVERRVPFIMCCGGKSSEDPSDDISSGNIPVLQKDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY
SIO_010081: Mib1
subclass of: SO_0000673
so part of: Mib1
location: join(1177170..1177398,1206385..1206556,1208475..1208604,1214247..1214351,1216920..1216986,1218822..1219026,1220880..1221063,1226652..1226796,1228741..1228874,1234410..1234517,1243589..1243786,1244782..1244933,1261899..1262031,1263662..1263748,1265070..1265231,1268157..1268338,1270751..1270943,1272547..1272625,1276358..1276471,1277799..1277899,1281407..1281547)
location: region:1177170-1281547:1
so has part: feature:1177170-1177398:1:exon
so has part: feature:1206385-1206556:1:exon
so has part: feature:1208475-1208604:1:exon
so has part: feature:1214247-1214351:1:exon
so has part: feature:1216920-1216986:1:exon
so has part: feature:1218822-1219026:1:exon
so has part: feature:1220880-1221063:1:exon
so has part: feature:1226652-1226796:1:exon
so has part: feature:1228741-1228874:1:exon
so has part: feature:1234410-1234517:1:exon
so has part: feature:1243589-1243786:1:exon
so has part: feature:1244782-1244933:1:exon
so has part: feature:1261899-1262031:1:exon
so has part: feature:1263662-1263748:1:exon
so has part: feature:1265070-1265231:1:exon
so has part: feature:1268157-1268338:1:exon
so has part: feature:1270751-1270943:1:exon
so has part: feature:1272547-1272625:1:exon
so has part: feature:1276358-1276471:1:exon
so has part: feature:1277799-1277899:1:exon
so has part: feature:1281407-1281547:1:exon

XP_036060164.1
type: Protein
SIO_000068: ncbiprotein

position:1177170:1
position: 1177170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281547:1
position: 1281547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177170-1177398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206385-1206556:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1208475-1208604:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1214247-1214351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1216920-1216986:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218822-1219026:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1220880-1221063:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1226652-1226796:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1228741-1228874:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1234410-1234517:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1243589-1243786:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1244782-1244933:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1261899-1262031:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1263662-1263748:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1265070-1265231:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1268157-1268338:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1270751-1270943:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1272547-1272625:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1276358-1276471:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1277799-1277899:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1281407-1281547:1:exon

LOC118594919
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1195243..1196907)
location: region:1195243-1196907:-1
so has part: feature:1195243-1196907:-1:exon

118594919
type: Gene
SIO_000068: ncbigene

position:1195243:-1
position: 1195243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196907:-1
position: 1196907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1195243-1196907:-1:exon

LOC118594919
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118594919
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118594919
subclass of: SO_0000673
so part of: LOC118594919
location: complement(1195243..1196326)
location: region:1195243-1196326:-1
so has part: feature:1195243-1196326:-1:exon

position:1196326:-1
position: 1196326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1195243-1196326:-1:exon

LOC118594919
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118594919
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118594919
subclass of: SO_0000673
so part of: LOC118594919
location: complement(1196876..1196907)
location: region:1196876-1196907:-1
so has part: feature:1196876-1196907:-1:exon

position:1196876:-1
position: 1196876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1196876-1196907:-1:exon

LOC118595087
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118595087
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 1224277..1224393
location: region:1224277-1224393:1
so has part: feature:1224277-1224393:1:exon

118595087
type: Gene
SIO_000068: ncbigene

position:1224277:1
position: 1224277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1224393:1
position: 1224393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1224277-1224393:1:exon

LOC118595087
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118595087
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00156
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118595087
subclass of: SO_0000673
so part of: LOC118595087
location: 1224277..1224393
location: region:1224277-1224393:1
so has part: feature:1224277-1224393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1224277-1224393:1:exon

LOC118595089
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118595089
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1556568..1556697
location: region:1556568-1556697:1
so has part: feature:1556568-1556697:1:exon
subclass of: SO_0000578

118595089
type: Gene
SIO_000068: ncbigene

position:1556568:1
position: 1556568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1556697:1
position: 1556697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1556568-1556697:1:exon

LOC118595089
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: snoRNA
gene: LOC118595089
product: small nucleolar RNA SNORA3/SNORA45 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00334
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004946462.1
SIO_010081: LOC118595089
subclass of: SO_0000673
so part of: LOC118595089
location: 1556568..1556697
location: region:1556568-1556697:1
so has part: feature:1556568-1556697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1556568-1556697:1:exon

Gata6
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Gata6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1620814..1650879
location: region:1620814-1650879:1
so has part: feature:1620814-1650879:1:exon
subclass of: SO_0000010

118594408
type: Gene
SIO_000068: ncbigene

position:1620814:1
position: 1620814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1650879:1
position: 1650879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1620814-1650879:1:exon

Gata6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Gata6
product: GATA binding protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036204240.1
SIO_010081: Gata6
subclass of: SO_0000673
so part of: Gata6
location: join(1620814..1621924,1625843..1626009,1629656..1629781,1631077..1631164,1631245..1631348,1650712..1650879)
location: region:1620814-1650879:1
so has part: feature:1620814-1621924:1:exon
so has part: feature:1625843-1626009:1:exon
so has part: feature:1629656-1629781:1:exon
so has part: feature:1631077-1631164:1:exon
so has part: feature:1631245-1631348:1:exon
so has part: feature:1650712-1650879:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1620814-1621924:1:exon

position:1621924:1
position: 1621924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1625843-1626009:1:exon

position:1625843:1
position: 1625843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626009:1
position: 1626009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1629656-1629781:1:exon

position:1629656:1
position: 1629656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629781:1
position: 1629781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1631077-1631164:1:exon

position:1631077:1
position: 1631077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1631164:1
position: 1631164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1631245-1631348:1:exon

position:1631245:1
position: 1631245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1631348:1
position: 1631348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1650712-1650879:1:exon

position:1650712:1
position: 1650712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gata6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Gata6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor GATA-6
translation: MALTDGGWCLPKRFGAAAADAGDSGAFLAREPSSPPSPISSSSSSCSRGGDRGPCGASNCRTPQLDTQAVAGPPGRSLLLSPYASHPFAAAHGPSAPGVPGPGSALSSWEDLLLFTDLDQAATASKLLWSSRGAKLSPFATEQPEEMYQTLAALSSQGPAAYDGAPGGFVHSAAAAAAAAAAATSPVYVPTTRVGSMLPGLPYLQGAGSGPSNHAGGAGAHPGWPQASADSPPYGGGGAAGGGAAGPGGAGSATAHASARFPYSPSPPMANGAARDPGGYVAAGSAGAGSVSGGSLAAMGGREHQYSSLSAARPLNGTYHHHHHHHPTYSPYMGAPLTPAWPAGPFETPVLHSLQSRAGAPLSVPRGPSADLLEDLSEGRECVNCGSIQTPLWRRDGTGHYLCNACGLYSKMNGLSRPLIKPQKRVPSSRRLGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKEGIQTRKRKPKNINKSKACSGNSSNSVPMTPTSSSSNSDDCTKTTSPSTQPTASGPGASVMSAVGEGPNSENSDLKYSGQDGLYIGVSLSSPAEVTSSVRQDSWCALALA
SIO_010081: Gata6
subclass of: SO_0000673
so part of: Gata6
location: join(1620814..1621924,1625843..1626009,1629656..1629781,1631077..1631164,1631245..1631348,1650712..1650879)
location: region:1620814-1650879:1
so has part: feature:1620814-1621924:1:exon
so has part: feature:1625843-1626009:1:exon
so has part: feature:1629656-1629781:1:exon
so has part: feature:1631077-1631164:1:exon
so has part: feature:1631245-1631348:1:exon
so has part: feature:1650712-1650879:1:exon

XP_036060133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1620814-1621924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1625843-1626009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1629656-1629781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1631077-1631164:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1631245-1631348:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1650712-1650879:1:exon

LOC118594859
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594859
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1848839..1914335
location: region:1848839-1914335:1
so has part: feature:1848839-1914335:1:exon
subclass of: SO_0000011

118594859
type: Gene
SIO_000068: ncbigene

position:1848839:1
position: 1848839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1914335:1
position: 1914335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1848839-1914335:1:exon

LOC118594859
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: lncRNA
gene: LOC118594859
product: uncharacterized LOC118594859
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004946419.1
SIO_010081: LOC118594859
subclass of: SO_0000673
so part of: LOC118594859
location: join(1848839..1849022,1851475..1851787,1869695..1869826,1874755..1874916,1913067..1913183,1913939..1914335)
location: region:1848839-1914335:1
so has part: feature:1848839-1849022:1:exon
so has part: feature:1851475-1851787:1:exon
so has part: feature:1869695-1869826:1:exon
so has part: feature:1874755-1874916:1:exon
so has part: feature:1913067-1913183:1:exon
so has part: feature:1913939-1914335:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1848839-1849022:1:exon

position:1849022:1
position: 1849022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1851475-1851787:1:exon

position:1851475:1
position: 1851475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1851787:1
position: 1851787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1869695-1869826:1:exon

position:1869695:1
position: 1869695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1869826:1
position: 1869826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1874755-1874916:1:exon

position:1874755:1
position: 1874755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1874916:1
position: 1874916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1913067-1913183:1:exon

position:1913067:1
position: 1913067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1913183:1
position: 1913183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1913939-1914335:1:exon

position:1913939:1
position: 1913939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118595014
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118595014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2191464..2193024
location: region:2191464-2193024:1
so has part: feature:2191464-2193024:1:exon

118595014
type: Gene
SIO_000068: ncbigene

position:2191464:1
position: 2191464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2193024:1
position: 2193024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2191464-2193024:1:exon

LOC118595014
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118595014
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118595014
subclass of: SO_0000673
so part of: LOC118595014
location: 2191464..2193024
location: region:2191464-2193024:1
so has part: feature:2191464-2193024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2191464-2193024:1:exon

Rbbp8
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Rbbp8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2351273..2430045
location: region:2351273-2430045:1
so has part: feature:2351273-2430045:1:exon
subclass of: SO_0000010

118594917
type: Gene
SIO_000068: ncbigene

position:2351273:1
position: 2351273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2430045:1
position: 2430045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2351273-2430045:1:exon

Rbbp8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Rbbp8
product: RB binding protein 8, endonuclease, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205179.1
SIO_010081: Rbbp8
subclass of: SO_0000673
so part of: Rbbp8
location: join(2351273..2351479,2354842..2355046,2365606..2365648,2372635..2372730,2374355..2374467,2379205..2379271,2387361..2387536,2391256..2391360,2398638..2398735,2401104..2401216,2402548..2403439,2403518..2403644,2406371..2406459,2407982..2408090,2413757..2413882,2419178..2419247,2424226..2424322,2428079..2428220,2429802..2430045)
location: region:2351273-2430045:1
so has part: feature:2351273-2351479:1:exon
so has part: feature:2354842-2355046:1:exon
so has part: feature:2365606-2365648:1:exon
so has part: feature:2372635-2372730:1:exon
so has part: feature:2374355-2374467:1:exon
so has part: feature:2379205-2379271:1:exon
so has part: feature:2387361-2387536:1:exon
so has part: feature:2391256-2391360:1:exon
so has part: feature:2398638-2398735:1:exon
so has part: feature:2401104-2401216:1:exon
so has part: feature:2402548-2403439:1:exon
so has part: feature:2403518-2403644:1:exon
so has part: feature:2406371-2406459:1:exon
so has part: feature:2407982-2408090:1:exon
so has part: feature:2413757-2413882:1:exon
so has part: feature:2419178-2419247:1:exon
so has part: feature:2424226-2424322:1:exon
so has part: feature:2428079-2428220:1:exon
so has part: feature:2429802-2430045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2351273-2351479:1:exon

position:2351479:1
position: 2351479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2354842-2355046:1:exon

position:2354842:1
position: 2354842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2355046:1
position: 2355046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2365606-2365648:1:exon

position:2365606:1
position: 2365606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2365648:1
position: 2365648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2372635-2372730:1:exon

position:2372635:1
position: 2372635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2372730:1
position: 2372730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2374355-2374467:1:exon

position:2374355:1
position: 2374355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2374467:1
position: 2374467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2379205-2379271:1:exon

position:2379205:1
position: 2379205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2379271:1
position: 2379271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2387361-2387536:1:exon

position:2387361:1
position: 2387361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2387536:1
position: 2387536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2391256-2391360:1:exon

position:2391256:1
position: 2391256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2391360:1
position: 2391360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2398638-2398735:1:exon

position:2398638:1
position: 2398638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2398735:1
position: 2398735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2401104-2401216:1:exon

position:2401104:1
position: 2401104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2401216:1
position: 2401216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2402548-2403439:1:exon

position:2402548:1
position: 2402548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2403439:1
position: 2403439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2403518-2403644:1:exon

position:2403518:1
position: 2403518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2403644:1
position: 2403644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2406371-2406459:1:exon

position:2406371:1
position: 2406371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2406459:1
position: 2406459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2407982-2408090:1:exon

position:2407982:1
position: 2407982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2408090:1
position: 2408090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2413757-2413882:1:exon

position:2413757:1
position: 2413757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2413882:1
position: 2413882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2419178-2419247:1:exon

position:2419178:1
position: 2419178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2419247:1
position: 2419247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2424226-2424322:1:exon

position:2424226:1
position: 2424226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2424322:1
position: 2424322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2428079-2428220:1:exon

position:2428079:1
position: 2428079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2428220:1
position: 2428220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2429802-2430045:1:exon

position:2429802:1
position: 2429802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rbbp8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Rbbp8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA endonuclease RBBP8 isoform X1
translation: MSISGSSCGSPNSADVSSDFKELWTKLKEYHDKEVQGLQIKVTKLKKERILDAQRLEEFFTKNQQLRDQQKVLQETIKILEDRLRAGLCDRCAVTEEHMHKKQQEFENIRQQNLKLITELMNEKNVLQEENKKLSEQLQQKIENDQQDQVAELECEENIIPDSPITSFSFSGTNRLRRKENLHVRYIEQTHTKLEHSVCTNELRKMSKALAPAPRNSEEHEILVADTCSQSHSPLSKICGSSSYPTDKSPFNLDTVVAETLGINVQEESEHQGPTSPLGDELYHCLEGDHKKQPSGESAGSSEDSLRCADAVAKTPPQEFTIRASSPVFGATSTVKTHLGLNTSFSPSLLDIGKRNLLKTAPFSNISVSKSEKARSKSEDSALFTHHSLGSEVNKVISQSLPKKQILMNKNVSESVDEQGSTDHIKHIITDKCLVPLKSLGGKASKRKKAEEESDRAVNCPQTCFDKENTLPFPVENQFCMNGDHVMDKPLDLSDRFAAAQRQEKSHGNETFKSKFKQVTVCEALKPVPKGSSSGRKALSGACILARDPSEVSCLQQCGLQSSGKVSPDPKMPVQTKEERPAVFKTPLCSQESLETESRLSDAKGTGSLVPTKVKNRSVHGGCEPASVLQLNPCRVAKTKPPPNNQDVSFENIQWSVDPGADLSQYKMDVTVIDTKGGSHSRLGETVDMDCTLVSETVLLKMKRQEHEAETPNGDIKMNDSLEEMFDQTTHEEYESFPQGPDEEELSAAAKKPNIHGDQQDKVKQKAFVGPYFQEKERESSIQNFPHIEVVRKKEERRKLLGHTCKECEIYYADMPPEEREKKLASCSRHRFRYIPPSTPENFWEVGFPSTQTCLERGYIKEDLDLCPRPKRRQPYTAVFSPKGKEQRT
SIO_010081: Rbbp8
subclass of: SO_0000673
so part of: Rbbp8
location: join(2354938..2355046,2365606..2365648,2372635..2372730,2374355..2374467,2379205..2379271,2387361..2387536,2391256..2391360,2398638..2398735,2401104..2401216,2402548..2403439,2403518..2403644,2406371..2406459,2407982..2408090,2413757..2413882,2419178..2419247,2424226..2424322,2428079..2428220,2429802..2429899)
location: region:2354938-2429899:1
so has part: feature:2354938-2355046:1:exon
so has part: feature:2365606-2365648:1:exon
so has part: feature:2372635-2372730:1:exon
so has part: feature:2374355-2374467:1:exon
so has part: feature:2379205-2379271:1:exon
so has part: feature:2387361-2387536:1:exon
so has part: feature:2391256-2391360:1:exon
so has part: feature:2398638-2398735:1:exon
so has part: feature:2401104-2401216:1:exon
so has part: feature:2402548-2403439:1:exon
so has part: feature:2403518-2403644:1:exon
so has part: feature:2406371-2406459:1:exon
so has part: feature:2407982-2408090:1:exon
so has part: feature:2413757-2413882:1:exon
so has part: feature:2419178-2419247:1:exon
so has part: feature:2424226-2424322:1:exon
so has part: feature:2428079-2428220:1:exon
so has part: feature:2429802-2429899:1:exon

XP_036061072.1
type: Protein
SIO_000068: ncbiprotein

position:2354938:1
position: 2354938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2429899:1
position: 2429899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2354938-2355046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2365606-2365648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2372635-2372730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2374355-2374467:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2379205-2379271:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2387361-2387536:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2391256-2391360:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2398638-2398735:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2401104-2401216:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2402548-2403439:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2403518-2403644:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2406371-2406459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2407982-2408090:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2413757-2413882:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2419178-2419247:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2424226-2424322:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2428079-2428220:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2429802-2429899:1:exon

Rbbp8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Rbbp8
product: RB binding protein 8, endonuclease, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_036205180.1
SIO_010081: Rbbp8
subclass of: SO_0000673
so part of: Rbbp8
location: join(2354984..2355046,2372635..2372730,2374355..2374467,2379205..2379271,2387361..2387536,2391256..2391360,2398638..2398735,2401104..2401216,2402548..2403439,2403518..2403644,2406371..2406459,2407982..2408090,2413757..2413882,2419178..2419247,2424226..2424322,2428079..2428220,2429802..2430045)
location: region:2354984-2430045:1
so has part: feature:2354984-2355046:1:exon
so has part: feature:2372635-2372730:1:exon
so has part: feature:2374355-2374467:1:exon
so has part: feature:2379205-2379271:1:exon
so has part: feature:2387361-2387536:1:exon
so has part: feature:2391256-2391360:1:exon
so has part: feature:2398638-2398735:1:exon
so has part: feature:2401104-2401216:1:exon
so has part: feature:2402548-2403439:1:exon
so has part: feature:2403518-2403644:1:exon
so has part: feature:2406371-2406459:1:exon
so has part: feature:2407982-2408090:1:exon
so has part: feature:2413757-2413882:1:exon
so has part: feature:2419178-2419247:1:exon
so has part: feature:2424226-2424322:1:exon
so has part: feature:2428079-2428220:1:exon
so has part: feature:2429802-2430045:1:exon

position:2354984:1
position: 2354984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2354984-2355046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2372635-2372730:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2374355-2374467:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2379205-2379271:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2387361-2387536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2391256-2391360:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2398638-2398735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2401104-2401216:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2402548-2403439:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2403518-2403644:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2406371-2406459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2407982-2408090:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2413757-2413882:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2419178-2419247:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2424226-2424322:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2428079-2428220:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2429802-2430045:1:exon

Rbbp8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Rbbp8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA endonuclease RBBP8 isoform X2
translation: MHKKQQEFENIRQQNLKLITELMNEKNVLQEENKKLSEQLQQKIENDQQDQVAELECEENIIPDSPITSFSFSGTNRLRRKENLHVRYIEQTHTKLEHSVCTNELRKMSKALAPAPRNSEEHEILVADTCSQSHSPLSKICGSSSYPTDKSPFNLDTVVAETLGINVQEESEHQGPTSPLGDELYHCLEGDHKKQPSGESAGSSEDSLRCADAVAKTPPQEFTIRASSPVFGATSTVKTHLGLNTSFSPSLLDIGKRNLLKTAPFSNISVSKSEKARSKSEDSALFTHHSLGSEVNKVISQSLPKKQILMNKNVSESVDEQGSTDHIKHIITDKCLVPLKSLGGKASKRKKAEEESDRAVNCPQTCFDKENTLPFPVENQFCMNGDHVMDKPLDLSDRFAAAQRQEKSHGNETFKSKFKQVTVCEALKPVPKGSSSGRKALSGACILARDPSEVSCLQQCGLQSSGKVSPDPKMPVQTKEERPAVFKTPLCSQESLETESRLSDAKGTGSLVPTKVKNRSVHGGCEPASVLQLNPCRVAKTKPPPNNQDVSFENIQWSVDPGADLSQYKMDVTVIDTKGGSHSRLGETVDMDCTLVSETVLLKMKRQEHEAETPNGDIKMNDSLEEMFDQTTHEEYESFPQGPDEEELSAAAKKPNIHGDQQDKVKQKAFVGPYFQEKERESSIQNFPHIEVVRKKEERRKLLGHTCKECEIYYADMPPEEREKKLASCSRHRFRYIPPSTPENFWEVGFPSTQTCLERGYIKEDLDLCPRPKRRQPYTAVFSPKGKEQRT
SIO_010081: Rbbp8
subclass of: SO_0000673
so part of: Rbbp8
location: join(2374401..2374467,2379205..2379271,2387361..2387536,2391256..2391360,2398638..2398735,2401104..2401216,2402548..2403439,2403518..2403644,2406371..2406459,2407982..2408090,2413757..2413882,2419178..2419247,2424226..2424322,2428079..2428220,2429802..2429899)
location: region:2374401-2429899:1
so has part: feature:2374401-2374467:1:exon
so has part: feature:2379205-2379271:1:exon
so has part: feature:2387361-2387536:1:exon
so has part: feature:2391256-2391360:1:exon
so has part: feature:2398638-2398735:1:exon
so has part: feature:2401104-2401216:1:exon
so has part: feature:2402548-2403439:1:exon
so has part: feature:2403518-2403644:1:exon
so has part: feature:2406371-2406459:1:exon
so has part: feature:2407982-2408090:1:exon
so has part: feature:2413757-2413882:1:exon
so has part: feature:2419178-2419247:1:exon
so has part: feature:2424226-2424322:1:exon
so has part: feature:2428079-2428220:1:exon
so has part: feature:2429802-2429899:1:exon

XP_036061073.1
type: Protein
SIO_000068: ncbiprotein

position:2374401:1
position: 2374401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2374401-2374467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2379205-2379271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2387361-2387536:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2391256-2391360:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2398638-2398735:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2401104-2401216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2402548-2403439:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2403518-2403644:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2406371-2406459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2407982-2408090:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2413757-2413882:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2419178-2419247:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2424226-2424322:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2428079-2428220:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2429802-2429899:1:exon

LOC118594643
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2540502..2551966)
location: region:2540502-2551966:-1
so has part: feature:2540502-2551966:-1:exon
subclass of: SO_0000011

118594643
type: Gene
SIO_000068: ncbigene

position:2540502:-1
position: 2540502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2551966:-1
position: 2551966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2540502-2551966:-1:exon

LOC118594643
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: lncRNA
gene: LOC118594643
product: uncharacterized LOC118594643
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004946393.1
SIO_010081: LOC118594643
subclass of: SO_0000673
so part of: LOC118594643
location: complement(join(2540502..2540569,2541072..2541203,2543343..2543468,2544851..2545008,2548078..2548252,2551780..2551966))
location: region:2540502-2551966:-1
so has part: feature:2551780-2551966:-1:exon
so has part: feature:2548078-2548252:-1:exon
so has part: feature:2544851-2545008:-1:exon
so has part: feature:2543343-2543468:-1:exon
so has part: feature:2541072-2541203:-1:exon
so has part: feature:2540502-2540569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2551780-2551966:-1:exon

position:2551780:-1
position: 2551780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2548078-2548252:-1:exon

position:2548078:-1
position: 2548078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2548252:-1
position: 2548252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2544851-2545008:-1:exon

position:2544851:-1
position: 2544851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2545008:-1
position: 2545008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2543343-2543468:-1:exon

position:2543343:-1
position: 2543343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2543468:-1
position: 2543468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2541072-2541203:-1:exon

position:2541072:-1
position: 2541072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2541203:-1
position: 2541203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2540502-2540569:-1:exon

position:2540569:-1
position: 2540569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cables1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Cables1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2553499..2665611
location: region:2553499-2665611:1
so has part: feature:2553499-2665611:1:exon
subclass of: SO_0000010

118594641
type: Gene
SIO_000068: ncbigene

position:2553499:1
position: 2553499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2665611:1
position: 2665611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2553499-2665611:1:exon

Cables1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Cables1
product: Cdk5 and Abl enzyme substrate 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036204674.1
SIO_010081: Cables1
subclass of: SO_0000673
so part of: Cables1
location: join(2553499..2554735,2603847..2603918,2609105..2609197,2626961..2627038,2645044..2645140,2646461..2646617,2647850..2647953,2658825..2658931,2660296..2660503,2664390..2665611)
location: region:2553499-2665611:1
so has part: feature:2553499-2554735:1:exon
so has part: feature:2603847-2603918:1:exon
so has part: feature:2609105-2609197:1:exon
so has part: feature:2626961-2627038:1:exon
so has part: feature:2645044-2645140:1:exon
so has part: feature:2646461-2646617:1:exon
so has part: feature:2647850-2647953:1:exon
so has part: feature:2658825-2658931:1:exon
so has part: feature:2660296-2660503:1:exon
so has part: feature:2664390-2665611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2553499-2554735:1:exon

position:2554735:1
position: 2554735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2603847-2603918:1:exon

position:2603847:1
position: 2603847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2603918:1
position: 2603918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2609105-2609197:1:exon

position:2609105:1
position: 2609105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2609197:1
position: 2609197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2626961-2627038:1:exon

position:2626961:1
position: 2626961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2627038:1
position: 2627038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2645044-2645140:1:exon

position:2645044:1
position: 2645044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2645140:1
position: 2645140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2646461-2646617:1:exon

position:2646461:1
position: 2646461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2646617:1
position: 2646617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2647850-2647953:1:exon

position:2647850:1
position: 2647850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2647953:1
position: 2647953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2658825-2658931:1:exon

position:2658825:1
position: 2658825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2658931:1
position: 2658931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2660296-2660503:1:exon

position:2660296:1
position: 2660296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2660503:1
position: 2660503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2664390-2665611:1:exon

position:2664390:1
position: 2664390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cables1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Cables1
product: Cdk5 and Abl enzyme substrate 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036204675.1
SIO_010081: Cables1
subclass of: SO_0000673
so part of: Cables1
location: join(2553499..2554735,2603847..2603918,2609105..2609197,2645044..2645140,2646461..2646617,2647850..2647953,2658825..2658931,2660296..2660503,2664390..2665611)
location: region:2553499-2665611:1
so has part: feature:2553499-2554735:1:exon
so has part: feature:2603847-2603918:1:exon
so has part: feature:2609105-2609197:1:exon
so has part: feature:2645044-2645140:1:exon
so has part: feature:2646461-2646617:1:exon
so has part: feature:2647850-2647953:1:exon
so has part: feature:2658825-2658931:1:exon
so has part: feature:2660296-2660503:1:exon
so has part: feature:2664390-2665611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2553499-2554735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2603847-2603918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2609105-2609197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2645044-2645140:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2646461-2646617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2647850-2647953:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2658825-2658931:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2660296-2660503:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2664390-2665611:1:exon

Cables1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Cables1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 and ABL1 enzyme substrate 1 isoform X1
translation: MAAATATAGTAACSSSSSSRGGTDAAATSGVQPPPPPAATAQPEPLRKPRVDPRRRQAALSFLTNISLDGRPPLQDDEWGGGEEGGATKPGARARLSLLAAGCNAFSAPGTAAAPWTAGSSPCPLPPSLVHRASGESLPPRSAPAVPGAQLQLPDGPGGAGQEELEEDDAFTNVQVPLASFLGSGTPGSASGSRGRLNSFTQGILPIAFSRQNSQNYCALEQPGQGGSTSALEQLQRSRRRLISQRSSLETLEDIEENAPLRRCRTLSGSPRPKNFKKIHFIKNMRQHDTRNGRIVLISGRRSFCSIFSVLPYRDSTQVGDLKLDGGRQSAGAMSLKEIIGLDGVELGADGKTVSYTQFLLPTNAFGTRRNTIDSTSSFSQFRNLSHRSLSMGRASSTQGSLDAGSDLGDFMDYDPNLLDDPQWPCGKHKRVLTFPSYMTTVIDYVKPSDLKKDMNETFKEKFPHIKLTLSKIRSLKREMRKLAQEDCGFEEPTVAMAFVYFEKLALKGKLNKQNRKLCAGACVLLAAKVGSDLKKHEVKHLIDKLEEKFRLNRRELIAFEFPVLVALEFALHLPEHEVMPHYRRLIQNS
SIO_010081: Cables1
subclass of: SO_0000673
so part of: Cables1
location: join(2554020..2554735,2603847..2603918,2609105..2609197,2626961..2627038,2645044..2645140,2646461..2646617,2647850..2647953,2658825..2658931,2660296..2660503,2664390..2664530)
location: region:2554020-2664530:1
so has part: feature:2554020-2554735:1:exon
so has part: feature:2603847-2603918:1:exon
so has part: feature:2609105-2609197:1:exon
so has part: feature:2626961-2627038:1:exon
so has part: feature:2645044-2645140:1:exon
so has part: feature:2646461-2646617:1:exon
so has part: feature:2647850-2647953:1:exon
so has part: feature:2658825-2658931:1:exon
so has part: feature:2660296-2660503:1:exon
so has part: feature:2664390-2664530:1:exon

XP_036060567.1
type: Protein
SIO_000068: ncbiprotein

position:2554020:1
position: 2554020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2664530:1
position: 2664530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2554020-2554735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2603847-2603918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2609105-2609197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2626961-2627038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2645044-2645140:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2646461-2646617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2647850-2647953:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2658825-2658931:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2660296-2660503:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2664390-2664530:1:exon

Cables1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Cables1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 and ABL1 enzyme substrate 1 isoform X2
translation: MAAATATAGTAACSSSSSSRGGTDAAATSGVQPPPPPAATAQPEPLRKPRVDPRRRQAALSFLTNISLDGRPPLQDDEWGGGEEGGATKPGARARLSLLAAGCNAFSAPGTAAAPWTAGSSPCPLPPSLVHRASGESLPPRSAPAVPGAQLQLPDGPGGAGQEELEEDDAFTNVQVPLASFLGSGTPGSASGSRGRLNSFTQGILPIAFSRQNSQNYCALEQPGQGGSTSALEQLQRSRRRLISQRSSLETLEDIEENAPLRRCRTLSGSPRPKNFKKIHFIKNMRQHDTRNGRDLKLDGGRQSAGAMSLKEIIGLDGVELGADGKTVSYTQFLLPTNAFGTRRNTIDSTSSFSQFRNLSHRSLSMGRASSTQGSLDAGSDLGDFMDYDPNLLDDPQWPCGKHKRVLTFPSYMTTVIDYVKPSDLKKDMNETFKEKFPHIKLTLSKIRSLKREMRKLAQEDCGFEEPTVAMAFVYFEKLALKGKLNKQNRKLCAGACVLLAAKVGSDLKKHEVKHLIDKLEEKFRLNRRELIAFEFPVLVALEFALHLPEHEVMPHYRRLIQNS
SIO_010081: Cables1
subclass of: SO_0000673
so part of: Cables1
location: join(2554020..2554735,2603847..2603918,2609105..2609197,2645044..2645140,2646461..2646617,2647850..2647953,2658825..2658931,2660296..2660503,2664390..2664530)
location: region:2554020-2664530:1
so has part: feature:2554020-2554735:1:exon
so has part: feature:2603847-2603918:1:exon
so has part: feature:2609105-2609197:1:exon
so has part: feature:2645044-2645140:1:exon
so has part: feature:2646461-2646617:1:exon
so has part: feature:2647850-2647953:1:exon
so has part: feature:2658825-2658931:1:exon
so has part: feature:2660296-2660503:1:exon
so has part: feature:2664390-2664530:1:exon

XP_036060568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2554020-2554735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2603847-2603918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2609105-2609197:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2645044-2645140:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2646461-2646617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2647850-2647953:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2658825-2658931:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2660296-2660503:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2664390-2664530:1:exon

LOC118594903
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2681370..2699858)
location: region:2681370-2699858:-1
so has part: feature:2681370-2699858:-1:exon
subclass of: SO_0000011

118594903
type: Gene
SIO_000068: ncbigene

position:2681370:-1
position: 2681370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2699858:-1
position: 2699858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2681370-2699858:-1:exon

LOC118594903
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: lncRNA
gene: LOC118594903
product: uncharacterized LOC118594903
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004946430.1
SIO_010081: LOC118594903
subclass of: SO_0000673
so part of: LOC118594903
location: complement(join(2681370..2681952,2693425..2693518,2699462..2699858))
location: region:2681370-2699858:-1
so has part: feature:2699462-2699858:-1:exon
so has part: feature:2693425-2693518:-1:exon
so has part: feature:2681370-2681952:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2699462-2699858:-1:exon

position:2699462:-1
position: 2699462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2693425-2693518:-1:exon

position:2693425:-1
position: 2693425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2693518:-1
position: 2693518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2681370-2681952:-1:exon

position:2681952:-1
position: 2681952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tmem241
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Tmem241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2713235..2854064)
location: region:2713235-2854064:-1
so has part: feature:2713235-2854064:-1:exon
subclass of: SO_0000010

118594881
type: Gene
SIO_000068: ncbigene

position:2713235:-1
position: 2713235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2854064:-1
position: 2854064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2713235-2854064:-1:exon

Tmem241
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Tmem241
product: transmembrane protein 241, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_036205131.1
SIO_010081: Tmem241
subclass of: SO_0000673
so part of: Tmem241
location: complement(join(2713235..2714723,2783200..2783293,2787012..2787081,2796544..2796578,2801915..2801950,2804818..2804863,2806689..2806737,2809098..2809149,2812707..2812732,2833717..2833798,2843175..2843252,2850574..2850620,2853777..2854064))
location: region:2713235-2854064:-1
so has part: feature:2853777-2854064:-1:exon
so has part: feature:2850574-2850620:-1:exon
so has part: feature:2843175-2843252:-1:exon
so has part: feature:2833717-2833798:-1:exon
so has part: feature:2812707-2812732:-1:exon
so has part: feature:2809098-2809149:-1:exon
so has part: feature:2806689-2806737:-1:exon
so has part: feature:2804818-2804863:-1:exon
so has part: feature:2801915-2801950:-1:exon
so has part: feature:2796544-2796578:-1:exon
so has part: feature:2787012-2787081:-1:exon
so has part: feature:2783200-2783293:-1:exon
so has part: feature:2713235-2714723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2853777-2854064:-1:exon

position:2853777:-1
position: 2853777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2850574-2850620:-1:exon

position:2850574:-1
position: 2850574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2850620:-1
position: 2850620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2843175-2843252:-1:exon

position:2843175:-1
position: 2843175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2843252:-1
position: 2843252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2833717-2833798:-1:exon

position:2833717:-1
position: 2833717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2833798:-1
position: 2833798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2812707-2812732:-1:exon

position:2812707:-1
position: 2812707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2812732:-1
position: 2812732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2809098-2809149:-1:exon

position:2809098:-1
position: 2809098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2809149:-1
position: 2809149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2806689-2806737:-1:exon

position:2806689:-1
position: 2806689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2806737:-1
position: 2806737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2804818-2804863:-1:exon

position:2804818:-1
position: 2804818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2804863:-1
position: 2804863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2801915-2801950:-1:exon

position:2801915:-1
position: 2801915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2801950:-1
position: 2801950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2796544-2796578:-1:exon

position:2796544:-1
position: 2796544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2796578:-1
position: 2796578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2787012-2787081:-1:exon

position:2787012:-1
position: 2787012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2787081:-1
position: 2787081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2783200-2783293:-1:exon

position:2783200:-1
position: 2783200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2783293:-1
position: 2783293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2713235-2714723:-1:exon

position:2714723:-1
position: 2714723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tmem241
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Tmem241
product: transmembrane protein 241, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_036205129.1
SIO_010081: Tmem241
subclass of: SO_0000673
so part of: Tmem241
location: complement(join(2713235..2714723,2783200..2783293,2787012..2787081,2796544..2796578,2801915..2801950,2804818..2804863,2806689..2806737,2809098..2809149,2812707..2812732,2821721..2821798,2833717..2833798,2843175..2843252,2850574..2850620,2853777..2854064))
location: region:2713235-2854064:-1
so has part: feature:2853777-2854064:-1:exon
so has part: feature:2850574-2850620:-1:exon
so has part: feature:2843175-2843252:-1:exon
so has part: feature:2833717-2833798:-1:exon
so has part: feature:2821721-2821798:-1:exon
so has part: feature:2812707-2812732:-1:exon
so has part: feature:2809098-2809149:-1:exon
so has part: feature:2806689-2806737:-1:exon
so has part: feature:2804818-2804863:-1:exon
so has part: feature:2801915-2801950:-1:exon
so has part: feature:2796544-2796578:-1:exon
so has part: feature:2787012-2787081:-1:exon
so has part: feature:2783200-2783293:-1:exon
so has part: feature:2713235-2714723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2853777-2854064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2850574-2850620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2843175-2843252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2833717-2833798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2821721-2821798:-1:exon

position:2821721:-1
position: 2821721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2821798:-1
position: 2821798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2812707-2812732:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2809098-2809149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2806689-2806737:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2804818-2804863:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2801915-2801950:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2796544-2796578:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2787012-2787081:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2783200-2783293:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2713235-2714723:-1:exon

Tmem241
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Tmem241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 241 isoform X3
translation: MIGRRSLLGLTFCTCYLASHLTNKYVLSVLKFTYPTLFQGWQTFLGGLLLHVSWKLGWVEINSSFRSNVLAWLPAAVLFVGIIYAGSRALSRLKTSPTKICSALFLVAAAGCLPFQDAQFDPDGYFWAVIHLFCVGAYKILQKSQKPSMLSDVDQQYLNYIFSVALLGFASHPTGDLFSALDFPFLHFYRFHGSCCASGVLGFFLMLSSVKLKSILAPGQCAAWTFFAKLPAWCTWRGPAGYLRAEEFLMKMCRKSKHTPCCWSRIQHSGLPLERQRKNTPQRDQAELSVC
SIO_010081: Tmem241
subclass of: SO_0000673
so part of: Tmem241
location: complement(join(2714535..2714723,2783200..2783293,2787012..2787081,2796544..2796578,2801915..2801950,2804818..2804863,2806689..2806737,2809098..2809149,2812707..2812732,2833717..2833798,2843175..2843252,2850574..2850620,2853777..2853848))
location: region:2714535-2853848:-1
so has part: feature:2853777-2853848:-1:exon
so has part: feature:2850574-2850620:-1:exon
so has part: feature:2843175-2843252:-1:exon
so has part: feature:2833717-2833798:-1:exon
so has part: feature:2812707-2812732:-1:exon
so has part: feature:2809098-2809149:-1:exon
so has part: feature:2806689-2806737:-1:exon
so has part: feature:2804818-2804863:-1:exon
so has part: feature:2801915-2801950:-1:exon
so has part: feature:2796544-2796578:-1:exon
so has part: feature:2787012-2787081:-1:exon
so has part: feature:2783200-2783293:-1:exon
so has part: feature:2714535-2714723:-1:exon

XP_036061024.1
type: Protein
SIO_000068: ncbiprotein

position:2714535:-1
position: 2714535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2853848:-1
position: 2853848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2853777-2853848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2850574-2850620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2843175-2843252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2833717-2833798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2812707-2812732:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2809098-2809149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2806689-2806737:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2804818-2804863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2801915-2801950:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2796544-2796578:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2787012-2787081:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2783200-2783293:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2714535-2714723:-1:exon

Tmem241
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Tmem241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 241 isoform X1
translation: MIGRRSLLGLTFCTCYLASHLTNKYVLSVLKFTYPTLFQGWQTFLGGLLLHVSWKLGWVEINSSFRSNVLAWLPAAVLFVGIIYAGSRALSRLAIPVFFILHNVAEVLICGYRKCVWKEKTSPTKICSALFLVAAAGCLPFQDAQFDPDGYFWAVIHLFCVGAYKILQKSQKPSMLSDVDQQYLNYIFSVALLGFASHPTGDLFSALDFPFLHFYRFHGSCCASGVLGFFLMLSSVKLKSILAPGQCAAWTFFAKLPAWCTWRGPAGYLRAEEFLMKMCRKSKHTPCCWSRIQHSGLPLERQRKNTPQRDQAELSVC
SIO_010081: Tmem241
subclass of: SO_0000673
so part of: Tmem241
location: complement(join(2714535..2714723,2783200..2783293,2787012..2787081,2796544..2796578,2801915..2801950,2804818..2804863,2806689..2806737,2809098..2809149,2812707..2812732,2821721..2821798,2833717..2833798,2843175..2843252,2850574..2850620,2853777..2853848))
location: region:2714535-2853848:-1
so has part: feature:2853777-2853848:-1:exon
so has part: feature:2850574-2850620:-1:exon
so has part: feature:2843175-2843252:-1:exon
so has part: feature:2833717-2833798:-1:exon
so has part: feature:2821721-2821798:-1:exon
so has part: feature:2812707-2812732:-1:exon
so has part: feature:2809098-2809149:-1:exon
so has part: feature:2806689-2806737:-1:exon
so has part: feature:2804818-2804863:-1:exon
so has part: feature:2801915-2801950:-1:exon
so has part: feature:2796544-2796578:-1:exon
so has part: feature:2787012-2787081:-1:exon
so has part: feature:2783200-2783293:-1:exon
so has part: feature:2714535-2714723:-1:exon

XP_036061022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2853777-2853848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2850574-2850620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2843175-2843252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2833717-2833798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2821721-2821798:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2812707-2812732:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2809098-2809149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2806689-2806737:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2804818-2804863:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2801915-2801950:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2796544-2796578:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2787012-2787081:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2783200-2783293:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2714535-2714723:-1:exon

Tmem241
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Tmem241
product: transmembrane protein 241, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205130.1
SIO_010081: Tmem241
subclass of: SO_0000673
so part of: Tmem241
location: complement(join(2714604..2714723,2740877..2740941,2783200..2783293,2787012..2787081,2796544..2796578,2801915..2801950,2804818..2804863,2806689..2806737,2809098..2809149,2812707..2812732,2821721..2821798,2833717..2833798,2843175..2843252,2850574..2850620,2853777..2854064))
location: region:2714604-2854064:-1
so has part: feature:2853777-2854064:-1:exon
so has part: feature:2850574-2850620:-1:exon
so has part: feature:2843175-2843252:-1:exon
so has part: feature:2833717-2833798:-1:exon
so has part: feature:2821721-2821798:-1:exon
so has part: feature:2812707-2812732:-1:exon
so has part: feature:2809098-2809149:-1:exon
so has part: feature:2806689-2806737:-1:exon
so has part: feature:2804818-2804863:-1:exon
so has part: feature:2801915-2801950:-1:exon
so has part: feature:2796544-2796578:-1:exon
so has part: feature:2787012-2787081:-1:exon
so has part: feature:2783200-2783293:-1:exon
so has part: feature:2740877-2740941:-1:exon
so has part: feature:2714604-2714723:-1:exon

position:2714604:-1
position: 2714604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2853777-2854064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2850574-2850620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2843175-2843252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2833717-2833798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2821721-2821798:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2812707-2812732:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2809098-2809149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2806689-2806737:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2804818-2804863:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2801915-2801950:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2796544-2796578:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2787012-2787081:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2783200-2783293:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2740877-2740941:-1:exon

position:2740877:-1
position: 2740877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2740941:-1
position: 2740941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2714604-2714723:-1:exon

Tmem241
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Tmem241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 241 isoform X2
translation: MIGRRSLLGLTFCTCYLASHLTNKYVLSVLKFTYPTLFQGWQTFLGGLLLHVSWKLGWVEINSSFRSNVLAWLPAAVLFVGIIYAGSRALSRLAIPVFFILHNVAEVLICGYRKCVWKEKTSPTKICSALFLVAAAGCLPFQDAQFDPDGYFWAVIHLFCVGAYKILQKSQKPSMLSDVDQQYLNYIFSVALLGFASHPTGDLFSALDFPFLHFYRFHGSCCASGVLGFFLMLSSVKLKSILAPGQCAAWTFFAKVTTAALSLVLFDVILTRAAVGCFLLGVLGEALLVISERRSS
SIO_010081: Tmem241
subclass of: SO_0000673
so part of: Tmem241
location: complement(join(2714663..2714723,2740877..2740941,2783200..2783293,2787012..2787081,2796544..2796578,2801915..2801950,2804818..2804863,2806689..2806737,2809098..2809149,2812707..2812732,2821721..2821798,2833717..2833798,2843175..2843252,2850574..2850620,2853777..2853848))
location: region:2714663-2853848:-1
so has part: feature:2853777-2853848:-1:exon
so has part: feature:2850574-2850620:-1:exon
so has part: feature:2843175-2843252:-1:exon
so has part: feature:2833717-2833798:-1:exon
so has part: feature:2821721-2821798:-1:exon
so has part: feature:2812707-2812732:-1:exon
so has part: feature:2809098-2809149:-1:exon
so has part: feature:2806689-2806737:-1:exon
so has part: feature:2804818-2804863:-1:exon
so has part: feature:2801915-2801950:-1:exon
so has part: feature:2796544-2796578:-1:exon
so has part: feature:2787012-2787081:-1:exon
so has part: feature:2783200-2783293:-1:exon
so has part: feature:2740877-2740941:-1:exon
so has part: feature:2714663-2714723:-1:exon

XP_036061023.1
type: Protein
SIO_000068: ncbiprotein

position:2714663:-1
position: 2714663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2853777-2853848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2850574-2850620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2843175-2843252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2833717-2833798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2821721-2821798:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2812707-2812732:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2809098-2809149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2806689-2806737:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2804818-2804863:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2801915-2801950:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2796544-2796578:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2787012-2787081:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2783200-2783293:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2740877-2740941:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2714663-2714723:-1:exon

LOC118594882
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2755589..2755786
location: region:2755589-2755786:1
so has part: feature:2755589-2755786:1:exon
subclass of: SO_0000010

118594882
type: Gene
SIO_000068: ncbigene

position:2755589:1
position: 2755589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2755786:1
position: 2755786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2755589-2755786:1:exon

LOC118594882
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118594882
product: translation machinery-associated protein 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_036205132.1
SIO_010081: LOC118594882
subclass of: SO_0000673
so part of: LOC118594882
location: 2755589..2755786
location: region:2755589-2755786:1
so has part: feature:2755589-2755786:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2755589-2755786:1:exon

LOC118594882
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118594882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation machinery-associated protein 7-like
translation: MLGPEGGGKKKPLKLPKKQAKEMDEEDKAFKQKQKEEQKKLKKLKAKAAGKGPLATGEIKKSGKK
SIO_010081: LOC118594882
subclass of: SO_0000673
so part of: LOC118594882
location: 2755589..2755786
location: region:2755589-2755786:1
so has part: feature:2755589-2755786:1:exon

XP_036061025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2755589-2755786:1:exon

Riok3
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Riok3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2861243..2889139
location: region:2861243-2889139:1
so has part: feature:2861243-2889139:1:exon
subclass of: SO_0000010

118594718
type: Gene
SIO_000068: ncbigene

position:2861243:1
position: 2861243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2889139:1
position: 2889139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2861243-2889139:1:exon

Riok3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Riok3
product: RIO kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036204851.1
SIO_010081: Riok3
subclass of: SO_0000673
so part of: Riok3
location: join(2861243..2861469,2867869..2867984,2868662..2868807,2868900..2869007,2869192..2869301,2871679..2871822,2875242..2875369,2881937..2882134,2882653..2882812,2885732..2885812,2885902..2885991,2886736..2886843,2887945..2889139)
location: region:2861243-2889139:1
so has part: feature:2861243-2861469:1:exon
so has part: feature:2867869-2867984:1:exon
so has part: feature:2868662-2868807:1:exon
so has part: feature:2868900-2869007:1:exon
so has part: feature:2869192-2869301:1:exon
so has part: feature:2871679-2871822:1:exon
so has part: feature:2875242-2875369:1:exon
so has part: feature:2881937-2882134:1:exon
so has part: feature:2882653-2882812:1:exon
so has part: feature:2885732-2885812:1:exon
so has part: feature:2885902-2885991:1:exon
so has part: feature:2886736-2886843:1:exon
so has part: feature:2887945-2889139:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2861243-2861469:1:exon

position:2861469:1
position: 2861469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2867869-2867984:1:exon

position:2867869:1
position: 2867869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2867984:1
position: 2867984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2868662-2868807:1:exon

position:2868662:1
position: 2868662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2868807:1
position: 2868807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2868900-2869007:1:exon

position:2868900:1
position: 2868900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2869007:1
position: 2869007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2869192-2869301:1:exon

position:2869192:1
position: 2869192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2869301:1
position: 2869301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2871679-2871822:1:exon

position:2871679:1
position: 2871679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2871822:1
position: 2871822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2875242-2875369:1:exon

position:2875242:1
position: 2875242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2875369:1
position: 2875369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2881937-2882134:1:exon

position:2881937:1
position: 2881937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2882134:1
position: 2882134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2882653-2882812:1:exon

position:2882653:1
position: 2882653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2882812:1
position: 2882812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2885732-2885812:1:exon

position:2885732:1
position: 2885732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2885812:1
position: 2885812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2885902-2885991:1:exon

position:2885902:1
position: 2885902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2885991:1
position: 2885991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2886736-2886843:1:exon

position:2886736:1
position: 2886736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2886843:1
position: 2886843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2887945-2889139:1:exon

position:2887945:1
position: 2887945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Riok3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Riok3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase RIO3
translation: MDLVGVSSPEPGPAAAWGPSKCPWATPQNTVSCSLTEVMSEELARELQLEEEAAAFPEVVVAEGPFISGENVDTSSDLMLAQMLQMEFDREYDAQLRREEKKFNGDSKVSISFENYRKVHPFEDSDSSEDEVDWQDTRDDPYRPAKPIPTPKKGFIGKGKDITTKHDEVVCGRKNTARMENFAPGFQVGDGIGMDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSLEEDKEDGKAIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLTRMQKAGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLSSEEMKDAYHQTLHLMQQLYNECNLVHADLSEYNMLWHAGKIWLIDVSQSVEPTHPHGLEFLFRDCRNVSQFFQKGGVKEALNERELFNAVSGLNISADNEADFLAEIEALEKMNEDHVQKNGRKAASFLKDDGGPPVLSAE
SIO_010081: Riok3
subclass of: SO_0000673
so part of: Riok3
location: join(2861407..2861469,2867869..2867984,2868662..2868807,2868900..2869007,2869192..2869301,2871679..2871822,2875242..2875369,2881937..2882134,2882653..2882812,2885732..2885812,2885902..2885991,2886736..2886843,2887945..2888052)
location: region:2861407-2888052:1
so has part: feature:2861407-2861469:1:exon
so has part: feature:2867869-2867984:1:exon
so has part: feature:2868662-2868807:1:exon
so has part: feature:2868900-2869007:1:exon
so has part: feature:2869192-2869301:1:exon
so has part: feature:2871679-2871822:1:exon
so has part: feature:2875242-2875369:1:exon
so has part: feature:2881937-2882134:1:exon
so has part: feature:2882653-2882812:1:exon
so has part: feature:2885732-2885812:1:exon
so has part: feature:2885902-2885991:1:exon
so has part: feature:2886736-2886843:1:exon
so has part: feature:2887945-2888052:1:exon

XP_036060744.1
type: Protein
SIO_000068: ncbiprotein

position:2861407:1
position: 2861407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2888052:1
position: 2888052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2861407-2861469:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2867869-2867984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2868662-2868807:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2868900-2869007:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2869192-2869301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2871679-2871822:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2875242-2875369:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2881937-2882134:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2882653-2882812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2885732-2885812:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2885902-2885991:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2886736-2886843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2887945-2888052:1:exon

LOC118594863
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594863
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2895531..2904135)
location: region:2895531-2904135:-1
so has part: feature:2895531-2904135:-1:exon
subclass of: SO_0000011

118594863
type: Gene
SIO_000068: ncbigene

position:2895531:-1
position: 2895531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2904135:-1
position: 2904135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2895531-2904135:-1:exon

LOC118594863
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: lncRNA
gene: LOC118594863
product: uncharacterized LOC118594863, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004946421.1
SIO_010081: LOC118594863
subclass of: SO_0000673
so part of: LOC118594863
location: complement(join(2895531..2895561,2898176..2898316,2903866..2904135))
location: region:2895531-2904135:-1
so has part: feature:2903866-2904135:-1:exon
so has part: feature:2898176-2898316:-1:exon
so has part: feature:2895531-2895561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2903866-2904135:-1:exon

position:2903866:-1
position: 2903866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2898176-2898316:-1:exon

position:2898176:-1
position: 2898176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2898316:-1
position: 2898316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2895531-2895561:-1:exon

position:2895561:-1
position: 2895561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118594863
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: lncRNA
gene: LOC118594863
product: uncharacterized LOC118594863, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004946420.1
SIO_010081: LOC118594863
subclass of: SO_0000673
so part of: LOC118594863
location: complement(join(2895531..2895561,2896765..2896899,2898176..2898316,2903866..2904135))
location: region:2895531-2904135:-1
so has part: feature:2903866-2904135:-1:exon
so has part: feature:2898176-2898316:-1:exon
so has part: feature:2896765-2896899:-1:exon
so has part: feature:2895531-2895561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2903866-2904135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2898176-2898316:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2896765-2896899:-1:exon

position:2896765:-1
position: 2896765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2896899:-1
position: 2896899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2895531-2895561:-1:exon

Rmc1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Rmc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2905039..2927485
location: region:2905039-2927485:1
so has part: feature:2905039-2927485:1:exon
subclass of: SO_0000010

118594841
type: Gene
SIO_000068: ncbigene

position:2905039:1
position: 2905039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2927485:1
position: 2927485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2905039-2927485:1:exon

Rmc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Rmc1
product: regulator of MON1-CCZ1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205053.1
SIO_010081: Rmc1
subclass of: SO_0000673
so part of: Rmc1
location: join(2905039..2905226,2905599..2905675,2907670..2907754,2910418..2910474,2912310..2912396,2914610..2914750,2915048..2915151,2916774..2916863,2916959..2917064,2918019..2918130,2921018..2921062,2921251..2921304,2922246..2922374,2923074..2923180,2925657..2925776,2925997..2926074,2926311..2926415,2926505..2926877,2927304..2927485)
location: region:2905039-2927485:1
so has part: feature:2905039-2905226:1:exon
so has part: feature:2905599-2905675:1:exon
so has part: feature:2907670-2907754:1:exon
so has part: feature:2910418-2910474:1:exon
so has part: feature:2912310-2912396:1:exon
so has part: feature:2914610-2914750:1:exon
so has part: feature:2915048-2915151:1:exon
so has part: feature:2916774-2916863:1:exon
so has part: feature:2916959-2917064:1:exon
so has part: feature:2918019-2918130:1:exon
so has part: feature:2921018-2921062:1:exon
so has part: feature:2921251-2921304:1:exon
so has part: feature:2922246-2922374:1:exon
so has part: feature:2923074-2923180:1:exon
so has part: feature:2925657-2925776:1:exon
so has part: feature:2925997-2926074:1:exon
so has part: feature:2926311-2926415:1:exon
so has part: feature:2926505-2926877:1:exon
so has part: feature:2927304-2927485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2905039-2905226:1:exon

position:2905226:1
position: 2905226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2905599-2905675:1:exon

position:2905599:1
position: 2905599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2905675:1
position: 2905675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2907670-2907754:1:exon

position:2907670:1
position: 2907670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2907754:1
position: 2907754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2910418-2910474:1:exon

position:2910418:1
position: 2910418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2910474:1
position: 2910474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2912310-2912396:1:exon

position:2912310:1
position: 2912310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2912396:1
position: 2912396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2914610-2914750:1:exon

position:2914610:1
position: 2914610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2914750:1
position: 2914750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2915048-2915151:1:exon

position:2915048:1
position: 2915048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2915151:1
position: 2915151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2916774-2916863:1:exon

position:2916774:1
position: 2916774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2916863:1
position: 2916863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2916959-2917064:1:exon

position:2916959:1
position: 2916959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2917064:1
position: 2917064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2918019-2918130:1:exon

position:2918019:1
position: 2918019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2918130:1
position: 2918130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2921018-2921062:1:exon

position:2921018:1
position: 2921018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2921062:1
position: 2921062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2921251-2921304:1:exon

position:2921251:1
position: 2921251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2921304:1
position: 2921304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2922246-2922374:1:exon

position:2922246:1
position: 2922246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2922374:1
position: 2922374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2923074-2923180:1:exon

position:2923074:1
position: 2923074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2923180:1
position: 2923180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2925657-2925776:1:exon

position:2925657:1
position: 2925657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2925776:1
position: 2925776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2925997-2926074:1:exon

position:2925997:1
position: 2925997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2926074:1
position: 2926074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2926311-2926415:1:exon

position:2926311:1
position: 2926311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2926415:1
position: 2926415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2926505-2926877:1:exon

position:2926505:1
position: 2926505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2926877:1
position: 2926877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2927304-2927485:1:exon

position:2927304:1
position: 2927304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rmc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Rmc1
product: regulator of MON1-CCZ1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205055.1
SIO_010081: Rmc1
subclass of: SO_0000673
so part of: Rmc1
location: join(2905039..2905226,2905599..2905675,2907670..2907754,2910418..2910474,2912310..2912396,2914610..2914750,2915048..2915151,2916774..2916863,2916959..2917064,2918019..2918130,2921018..2921062,2921251..2921304,2922246..2922374,2923074..2923180,2925657..2925776,2925997..2926074,2926311..2926415,2926505..2926573,2926652..2926877,2927304..2927461)
location: region:2905039-2927461:1
so has part: feature:2905039-2905226:1:exon
so has part: feature:2905599-2905675:1:exon
so has part: feature:2907670-2907754:1:exon
so has part: feature:2910418-2910474:1:exon
so has part: feature:2912310-2912396:1:exon
so has part: feature:2914610-2914750:1:exon
so has part: feature:2915048-2915151:1:exon
so has part: feature:2916774-2916863:1:exon
so has part: feature:2916959-2917064:1:exon
so has part: feature:2918019-2918130:1:exon
so has part: feature:2921018-2921062:1:exon
so has part: feature:2921251-2921304:1:exon
so has part: feature:2922246-2922374:1:exon
so has part: feature:2923074-2923180:1:exon
so has part: feature:2925657-2925776:1:exon
so has part: feature:2925997-2926074:1:exon
so has part: feature:2926311-2926415:1:exon
so has part: feature:2926505-2926573:1:exon
so has part: feature:2926652-2926877:1:exon
so has part: feature:2927304-2927461:1:exon

position:2927461:1
position: 2927461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2905039-2905226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2905599-2905675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2907670-2907754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2910418-2910474:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2912310-2912396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2914610-2914750:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2915048-2915151:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2916774-2916863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2916959-2917064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2918019-2918130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2921018-2921062:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2921251-2921304:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2922246-2922374:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2923074-2923180:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2925657-2925776:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2925997-2926074:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2926311-2926415:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2926505-2926573:1:exon

position:2926573:1
position: 2926573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2926652-2926877:1:exon

position:2926652:1
position: 2926652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2927304-2927461:1:exon

Rmc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Rmc1
product: regulator of MON1-CCZ1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205052.1
SIO_010081: Rmc1
subclass of: SO_0000673
so part of: Rmc1
location: join(2905039..2905226,2905599..2905675,2907670..2907754,2910418..2910474,2912310..2912396,2914610..2914750,2915048..2915151,2916774..2916863,2916959..2917064,2918019..2918130,2921018..2921062,2921251..2921304,2922246..2922374,2923074..2923180,2925657..2925776,2925997..2926074,2926311..2926415,2926505..2927370)
location: region:2905039-2927370:1
so has part: feature:2905039-2905226:1:exon
so has part: feature:2905599-2905675:1:exon
so has part: feature:2907670-2907754:1:exon
so has part: feature:2910418-2910474:1:exon
so has part: feature:2912310-2912396:1:exon
so has part: feature:2914610-2914750:1:exon
so has part: feature:2915048-2915151:1:exon
so has part: feature:2916774-2916863:1:exon
so has part: feature:2916959-2917064:1:exon
so has part: feature:2918019-2918130:1:exon
so has part: feature:2921018-2921062:1:exon
so has part: feature:2921251-2921304:1:exon
so has part: feature:2922246-2922374:1:exon
so has part: feature:2923074-2923180:1:exon
so has part: feature:2925657-2925776:1:exon
so has part: feature:2925997-2926074:1:exon
so has part: feature:2926311-2926415:1:exon
so has part: feature:2926505-2927370:1:exon

position:2927370:1
position: 2927370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2905039-2905226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2905599-2905675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2907670-2907754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2910418-2910474:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2912310-2912396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2914610-2914750:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2915048-2915151:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2916774-2916863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2916959-2917064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2918019-2918130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2921018-2921062:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2921251-2921304:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2922246-2922374:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2923074-2923180:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2925657-2925776:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2925997-2926074:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2926311-2926415:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2926505-2927370:1:exon

Rmc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Rmc1
product: regulator of MON1-CCZ1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205054.1
SIO_010081: Rmc1
subclass of: SO_0000673
so part of: Rmc1
location: join(2905039..2905226,2905599..2905675,2907670..2907754,2910418..2910474,2912310..2912396,2914610..2914750,2915048..2915151,2916774..2916863,2916959..2917064,2918019..2918130,2921018..2921062,2921251..2921304,2922246..2922374,2923074..2923180,2925657..2925776,2925997..2926074,2926311..2926415,2926505..2926573,2926652..2927370)
location: region:2905039-2927370:1
so has part: feature:2905039-2905226:1:exon
so has part: feature:2905599-2905675:1:exon
so has part: feature:2907670-2907754:1:exon
so has part: feature:2910418-2910474:1:exon
so has part: feature:2912310-2912396:1:exon
so has part: feature:2914610-2914750:1:exon
so has part: feature:2915048-2915151:1:exon
so has part: feature:2916774-2916863:1:exon
so has part: feature:2916959-2917064:1:exon
so has part: feature:2918019-2918130:1:exon
so has part: feature:2921018-2921062:1:exon
so has part: feature:2921251-2921304:1:exon
so has part: feature:2922246-2922374:1:exon
so has part: feature:2923074-2923180:1:exon
so has part: feature:2925657-2925776:1:exon
so has part: feature:2925997-2926074:1:exon
so has part: feature:2926311-2926415:1:exon
so has part: feature:2926505-2926573:1:exon
so has part: feature:2926652-2927370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2905039-2905226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2905599-2905675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2907670-2907754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2910418-2910474:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2912310-2912396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2914610-2914750:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2915048-2915151:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2916774-2916863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2916959-2917064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2918019-2918130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2921018-2921062:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2921251-2921304:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2922246-2922374:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2923074-2923180:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2925657-2925776:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2925997-2926074:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2926311-2926415:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2926505-2926573:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2926652-2927370:1:exon

Rmc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Rmc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of MON1-CCZ1 complex isoform X2
translation: MGGEDYYLELCERPVQFEKANPVNCVFFDEANKQVFAVRSGGATGVVVKGPDDRNPISFRMDDRGEVKCIKFSLENKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEIVFITDQGIEFYQVLPEKRSLKLLKSHNINVNWYMYCPESAVILLSTTVLENVLQPFYFRAGTMSKLPKFEIELPAAPKSTKLSLSERDIAMATIYGRLYVLFLRHHSRASNGAGAEVVLYHLPREGACKKLHILKLNRTGKFALNVVDNLVVVHHQDTETSVIFDIKLRGEFDGTVTFHHPVLPARSIQPYQIPAAGPAAVTSQSPVPCKLYSSSWIVFQPDIIISASQGYLWNLQVKLQPVVTLLPDKGRLMDFLLQRKECKMVILSVCSQMLTESDRATLPVIATVFDKLNHEYKKYLDAEQSYTMAVEAGQSRSNPPLKRPVRTQAVVDQSDVYTHVLSPFVENKEMAHKFVIAVLMEYIRSLNQFQIPVQHYLHELVIKTLVQHNLFYTLHQFLQYHVLSDSKPLACLLLSLESFYPPAHQLSLDMLKVTWATTLAVTSIPSYGCPDHHLSHFQRLSTANDEIVEVLLSKHQVLAALRFIRGIGGHDNISARKFLDAAKQTDDVMLFYTIFRFFEQRNQRLRGNPNFTPGEHCEEHVAFFKQVFGEQALMRPTTF
SIO_010081: Rmc1
subclass of: SO_0000673
so part of: Rmc1
location: join(2905125..2905226,2905599..2905675,2907670..2907754,2910418..2910474,2912310..2912396,2914610..2914750,2915048..2915151,2916774..2916863,2916959..2917064,2918019..2918130,2921018..2921062,2921251..2921304,2922246..2922374,2923074..2923180,2925657..2925776,2925997..2926074,2926311..2926415,2926505..2926877,2927304..2927383)
location: region:2905125-2927383:1
so has part: feature:2905125-2905226:1:exon
so has part: feature:2905599-2905675:1:exon
so has part: feature:2907670-2907754:1:exon
so has part: feature:2910418-2910474:1:exon
so has part: feature:2912310-2912396:1:exon
so has part: feature:2914610-2914750:1:exon
so has part: feature:2915048-2915151:1:exon
so has part: feature:2916774-2916863:1:exon
so has part: feature:2916959-2917064:1:exon
so has part: feature:2918019-2918130:1:exon
so has part: feature:2921018-2921062:1:exon
so has part: feature:2921251-2921304:1:exon
so has part: feature:2922246-2922374:1:exon
so has part: feature:2923074-2923180:1:exon
so has part: feature:2925657-2925776:1:exon
so has part: feature:2925997-2926074:1:exon
so has part: feature:2926311-2926415:1:exon
so has part: feature:2926505-2926877:1:exon
so has part: feature:2927304-2927383:1:exon

XP_036060946.1
type: Protein
SIO_000068: ncbiprotein

position:2905125:1
position: 2905125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2927383:1
position: 2927383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2905125-2905226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2905599-2905675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2907670-2907754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2910418-2910474:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2912310-2912396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2914610-2914750:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2915048-2915151:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2916774-2916863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2916959-2917064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2918019-2918130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2921018-2921062:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2921251-2921304:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2922246-2922374:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2923074-2923180:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2925657-2925776:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2925997-2926074:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2926311-2926415:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2926505-2926877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2927304-2927383:1:exon

Rmc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Rmc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of MON1-CCZ1 complex isoform X4
translation: MGGEDYYLELCERPVQFEKANPVNCVFFDEANKQVFAVRSGGATGVVVKGPDDRNPISFRMDDRGEVKCIKFSLENKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEIVFITDQGIEFYQVLPEKRSLKLLKSHNINVNWYMYCPESAVILLSTTVLENVLQPFYFRAGTMSKLPKFEIELPAAPKSTKLSLSERDIAMATIYGRLYVLFLRHHSRASNGAGAEVVLYHLPREGACKKLHILKLNRTGKFALNVVDNLVVVHHQDTETSVIFDIKLRGEFDGTVTFHHPVLPARSIQPYQIPAAGPAAVTSQSPVPCKLYSSSWIVFQPDIIISASQGYLWNLQVKLQPVVTLLPDKGRLMDFLLQRKECKMVILSVCSQMLTESDRATLPVIATVFDKLNHEYKKYLDAEQSYTMAVEAGQSRSNPPLKRPVRTQAVVDQSDVYTHVLSPFVENKEMAHKFVIAVLMEYIRSLNQFQIPVQHYLHELVIKTLVQHNLFYTLHQFLQYHVLSDSKPLACLLLSLESFYPPAHQLSLDMLKRLSTANDEIVEVLLSKHQVLAALRFIRGIGGHDNISARKFLDAAKQTDDVMLFYTIFRFFEQRNQRLRGNPNFTPGEHCEEHVAFFKQVFGEQALMRPTTF
SIO_010081: Rmc1
subclass of: SO_0000673
so part of: Rmc1
location: join(2905125..2905226,2905599..2905675,2907670..2907754,2910418..2910474,2912310..2912396,2914610..2914750,2915048..2915151,2916774..2916863,2916959..2917064,2918019..2918130,2921018..2921062,2921251..2921304,2922246..2922374,2923074..2923180,2925657..2925776,2925997..2926074,2926311..2926415,2926505..2926573,2926652..2926877,2927304..2927383)
location: region:2905125-2927383:1
so has part: feature:2905125-2905226:1:exon
so has part: feature:2905599-2905675:1:exon
so has part: feature:2907670-2907754:1:exon
so has part: feature:2910418-2910474:1:exon
so has part: feature:2912310-2912396:1:exon
so has part: feature:2914610-2914750:1:exon
so has part: feature:2915048-2915151:1:exon
so has part: feature:2916774-2916863:1:exon
so has part: feature:2916959-2917064:1:exon
so has part: feature:2918019-2918130:1:exon
so has part: feature:2921018-2921062:1:exon
so has part: feature:2921251-2921304:1:exon
so has part: feature:2922246-2922374:1:exon
so has part: feature:2923074-2923180:1:exon
so has part: feature:2925657-2925776:1:exon
so has part: feature:2925997-2926074:1:exon
so has part: feature:2926311-2926415:1:exon
so has part: feature:2926505-2926573:1:exon
so has part: feature:2926652-2926877:1:exon
so has part: feature:2927304-2927383:1:exon

XP_036060948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2905125-2905226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2905599-2905675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2907670-2907754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2910418-2910474:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2912310-2912396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2914610-2914750:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2915048-2915151:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2916774-2916863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2916959-2917064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2918019-2918130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2921018-2921062:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2921251-2921304:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2922246-2922374:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2923074-2923180:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2925657-2925776:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2925997-2926074:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2926311-2926415:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2926505-2926573:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2926652-2926877:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2927304-2927383:1:exon

Rmc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Rmc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of MON1-CCZ1 complex isoform X1
translation: MGGEDYYLELCERPVQFEKANPVNCVFFDEANKQVFAVRSGGATGVVVKGPDDRNPISFRMDDRGEVKCIKFSLENKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEIVFITDQGIEFYQVLPEKRSLKLLKSHNINVNWYMYCPESAVILLSTTVLENVLQPFYFRAGTMSKLPKFEIELPAAPKSTKLSLSERDIAMATIYGRLYVLFLRHHSRASNGAGAEVVLYHLPREGACKKLHILKLNRTGKFALNVVDNLVVVHHQDTETSVIFDIKLRGEFDGTVTFHHPVLPARSIQPYQIPAAGPAAVTSQSPVPCKLYSSSWIVFQPDIIISASQGYLWNLQVKLQPVVTLLPDKGRLMDFLLQRKECKMVILSVCSQMLTESDRATLPVIATVFDKLNHEYKKYLDAEQSYTMAVEAGQSRSNPPLKRPVRTQAVVDQSDVYTHVLSPFVENKEMAHKFVIAVLMEYIRSLNQFQIPVQHYLHELVIKTLVQHNLFYTLHQFLQYHVLSDSKPLACLLLSLESFYPPAHQLSLDMLKVTWATTLAVTSIPSYGCPDHHLSHFQRLSTANDEIVEVLLSKHQVLAALRFIRGIGGHDNISARKFLDAAKQTDDVMLFYTIFRFFEQRNQRLRGNPNFTPGEGRPRVTTNSRSPPHPGVCDHRVRMLIDMNYTQEECLGLRHSGWNSGISE
SIO_010081: Rmc1
subclass of: SO_0000673
so part of: Rmc1
location: join(2905125..2905226,2905599..2905675,2907670..2907754,2910418..2910474,2912310..2912396,2914610..2914750,2915048..2915151,2916774..2916863,2916959..2917064,2918019..2918130,2921018..2921062,2921251..2921304,2922246..2922374,2923074..2923180,2925657..2925776,2925997..2926074,2926311..2926415,2926505..2927032)
location: region:2905125-2927032:1
so has part: feature:2905125-2905226:1:exon
so has part: feature:2905599-2905675:1:exon
so has part: feature:2907670-2907754:1:exon
so has part: feature:2910418-2910474:1:exon
so has part: feature:2912310-2912396:1:exon
so has part: feature:2914610-2914750:1:exon
so has part: feature:2915048-2915151:1:exon
so has part: feature:2916774-2916863:1:exon
so has part: feature:2916959-2917064:1:exon
so has part: feature:2918019-2918130:1:exon
so has part: feature:2921018-2921062:1:exon
so has part: feature:2921251-2921304:1:exon
so has part: feature:2922246-2922374:1:exon
so has part: feature:2923074-2923180:1:exon
so has part: feature:2925657-2925776:1:exon
so has part: feature:2925997-2926074:1:exon
so has part: feature:2926311-2926415:1:exon
so has part: feature:2926505-2927032:1:exon

XP_036060945.1
type: Protein
SIO_000068: ncbiprotein

position:2927032:1
position: 2927032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2905125-2905226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2905599-2905675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2907670-2907754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2910418-2910474:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2912310-2912396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2914610-2914750:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2915048-2915151:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2916774-2916863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2916959-2917064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2918019-2918130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2921018-2921062:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2921251-2921304:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2922246-2922374:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2923074-2923180:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2925657-2925776:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2925997-2926074:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2926311-2926415:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2926505-2927032:1:exon

Rmc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Rmc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of MON1-CCZ1 complex isoform X3
translation: MGGEDYYLELCERPVQFEKANPVNCVFFDEANKQVFAVRSGGATGVVVKGPDDRNPISFRMDDRGEVKCIKFSLENKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEIVFITDQGIEFYQVLPEKRSLKLLKSHNINVNWYMYCPESAVILLSTTVLENVLQPFYFRAGTMSKLPKFEIELPAAPKSTKLSLSERDIAMATIYGRLYVLFLRHHSRASNGAGAEVVLYHLPREGACKKLHILKLNRTGKFALNVVDNLVVVHHQDTETSVIFDIKLRGEFDGTVTFHHPVLPARSIQPYQIPAAGPAAVTSQSPVPCKLYSSSWIVFQPDIIISASQGYLWNLQVKLQPVVTLLPDKGRLMDFLLQRKECKMVILSVCSQMLTESDRATLPVIATVFDKLNHEYKKYLDAEQSYTMAVEAGQSRSNPPLKRPVRTQAVVDQSDVYTHVLSPFVENKEMAHKFVIAVLMEYIRSLNQFQIPVQHYLHELVIKTLVQHNLFYTLHQFLQYHVLSDSKPLACLLLSLESFYPPAHQLSLDMLKRLSTANDEIVEVLLSKHQVLAALRFIRGIGGHDNISARKFLDAAKQTDDVMLFYTIFRFFEQRNQRLRGNPNFTPGEGRPRVTTNSRSPPHPGVCDHRVRMLIDMNYTQEECLGLRHSGWNSGISE
SIO_010081: Rmc1
subclass of: SO_0000673
so part of: Rmc1
location: join(2905125..2905226,2905599..2905675,2907670..2907754,2910418..2910474,2912310..2912396,2914610..2914750,2915048..2915151,2916774..2916863,2916959..2917064,2918019..2918130,2921018..2921062,2921251..2921304,2922246..2922374,2923074..2923180,2925657..2925776,2925997..2926074,2926311..2926415,2926505..2926573,2926652..2927032)
location: region:2905125-2927032:1
so has part: feature:2905125-2905226:1:exon
so has part: feature:2905599-2905675:1:exon
so has part: feature:2907670-2907754:1:exon
so has part: feature:2910418-2910474:1:exon
so has part: feature:2912310-2912396:1:exon
so has part: feature:2914610-2914750:1:exon
so has part: feature:2915048-2915151:1:exon
so has part: feature:2916774-2916863:1:exon
so has part: feature:2916959-2917064:1:exon
so has part: feature:2918019-2918130:1:exon
so has part: feature:2921018-2921062:1:exon
so has part: feature:2921251-2921304:1:exon
so has part: feature:2922246-2922374:1:exon
so has part: feature:2923074-2923180:1:exon
so has part: feature:2925657-2925776:1:exon
so has part: feature:2925997-2926074:1:exon
so has part: feature:2926311-2926415:1:exon
so has part: feature:2926505-2926573:1:exon
so has part: feature:2926652-2927032:1:exon

XP_036060947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2905125-2905226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2905599-2905675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2907670-2907754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2910418-2910474:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2912310-2912396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2914610-2914750:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2915048-2915151:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2916774-2916863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2916959-2917064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2918019-2918130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2921018-2921062:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2921251-2921304:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2922246-2922374:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2923074-2923180:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2925657-2925776:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2925997-2926074:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2926311-2926415:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2926505-2926573:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2926652-2927032:1:exon

Trnat-agu
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Trnat-agu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2918310..2918382)
location: region:2918310-2918382:-1
so has part: feature:2918310-2918382:-1:exon
subclass of: SO_0000663

118595110
type: Gene
SIO_000068: ncbigene

position:2918310:-1
position: 2918310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2918382:-1
position: 2918382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2918310-2918382:-1:exon

Trnat-agu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 38674
gene: Trnat-agu
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2918347..2918349),aa:Thr, seq:agt)
SIO_010081: Trnat-agu
subclass of: SO_0000673
so part of: Trnat-agu
location: complement(2918310..2918382)
location: region:2918310-2918382:-1
so has part: feature:2918310-2918382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2918310-2918382:-1:exon

Npc1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Npc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2927179..2985349)
location: region:2927179-2985349:-1
so has part: feature:2927179-2985349:-1:exon
subclass of: SO_0000010

118594840
type: Gene
SIO_000068: ncbigene

position:2927179:-1
position: 2927179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2985349:-1
position: 2985349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2927179-2985349:-1:exon

Npc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Npc1
product: NPC intracellular cholesterol transporter 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036205051.1
SIO_010081: Npc1
subclass of: SO_0000673
so part of: Npc1
location: complement(join(2927179..2927898,2928706..2928868,2930089..2930202,2931475..2931706,2932067..2932071,2932548..2932743,2937463..2937592,2938098..2938213,2938837..2939027,2939394..2939483,2939981..2940121,2940204..2940331,2941435..2941549,2942238..2942420,2942842..2943031,2945381..2945483,2955805..2955905,2958933..2959159,2960026..2960396,2960916..2960989,2962632..2962881,2963525..2963692,2968789..2968964,2971532..2971638,2972585..2972707,2985169..2985349))
location: region:2927179-2985349:-1
so has part: feature:2985169-2985349:-1:exon
so has part: feature:2972585-2972707:-1:exon
so has part: feature:2971532-2971638:-1:exon
so has part: feature:2968789-2968964:-1:exon
so has part: feature:2963525-2963692:-1:exon
so has part: feature:2962632-2962881:-1:exon
so has part: feature:2960916-2960989:-1:exon
so has part: feature:2960026-2960396:-1:exon
so has part: feature:2958933-2959159:-1:exon
so has part: feature:2955805-2955905:-1:exon
so has part: feature:2945381-2945483:-1:exon
so has part: feature:2942842-2943031:-1:exon
so has part: feature:2942238-2942420:-1:exon
so has part: feature:2941435-2941549:-1:exon
so has part: feature:2940204-2940331:-1:exon
so has part: feature:2939981-2940121:-1:exon
so has part: feature:2939394-2939483:-1:exon
so has part: feature:2938837-2939027:-1:exon
so has part: feature:2938098-2938213:-1:exon
so has part: feature:2937463-2937592:-1:exon
so has part: feature:2932548-2932743:-1:exon
so has part: feature:2932067-2932071:-1:exon
so has part: feature:2931475-2931706:-1:exon
so has part: feature:2930089-2930202:-1:exon
so has part: feature:2928706-2928868:-1:exon
so has part: feature:2927179-2927898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2985169-2985349:-1:exon

position:2985169:-1
position: 2985169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2972585-2972707:-1:exon

position:2972585:-1
position: 2972585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2972707:-1
position: 2972707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2971532-2971638:-1:exon

position:2971532:-1
position: 2971532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2971638:-1
position: 2971638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2968789-2968964:-1:exon

position:2968789:-1
position: 2968789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2968964:-1
position: 2968964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2963525-2963692:-1:exon

position:2963525:-1
position: 2963525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2963692:-1
position: 2963692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2962632-2962881:-1:exon

position:2962632:-1
position: 2962632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2962881:-1
position: 2962881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2960916-2960989:-1:exon

position:2960916:-1
position: 2960916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2960989:-1
position: 2960989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2960026-2960396:-1:exon

position:2960026:-1
position: 2960026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2960396:-1
position: 2960396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2958933-2959159:-1:exon

position:2958933:-1
position: 2958933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2959159:-1
position: 2959159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2955805-2955905:-1:exon

position:2955805:-1
position: 2955805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2955905:-1
position: 2955905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2945381-2945483:-1:exon

position:2945381:-1
position: 2945381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2945483:-1
position: 2945483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2942842-2943031:-1:exon

position:2942842:-1
position: 2942842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2943031:-1
position: 2943031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2942238-2942420:-1:exon

position:2942238:-1
position: 2942238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2942420:-1
position: 2942420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2941435-2941549:-1:exon

position:2941435:-1
position: 2941435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2941549:-1
position: 2941549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2940204-2940331:-1:exon

position:2940204:-1
position: 2940204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2940331:-1
position: 2940331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2939981-2940121:-1:exon

position:2939981:-1
position: 2939981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2940121:-1
position: 2940121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2939394-2939483:-1:exon

position:2939394:-1
position: 2939394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2939483:-1
position: 2939483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2938837-2939027:-1:exon

position:2938837:-1
position: 2938837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2939027:-1
position: 2939027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2938098-2938213:-1:exon

position:2938098:-1
position: 2938098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2938213:-1
position: 2938213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2937463-2937592:-1:exon

position:2937463:-1
position: 2937463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2937592:-1
position: 2937592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2932548-2932743:-1:exon

position:2932548:-1
position: 2932548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2932743:-1
position: 2932743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2932067-2932071:-1:exon

position:2932067:-1
position: 2932067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2932071:-1
position: 2932071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2931475-2931706:-1:exon

position:2931475:-1
position: 2931475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2931706:-1
position: 2931706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2930089-2930202:-1:exon

position:2930089:-1
position: 2930089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2930202:-1
position: 2930202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2928706-2928868:-1:exon

position:2928706:-1
position: 2928706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2928868:-1
position: 2928868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2927179-2927898:-1:exon

position:2927898:-1
position: 2927898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Npc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Npc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NPC intracellular cholesterol transporter 1 isoform X2
translation: MSARHPALGLLLLLLLLCPAQVFPQSCVWYGECGIAVGDKRYNCKYSGPPKPLPKDGYDLVQELCPGFFFGDVSLCCDVQQLQTLKNNLQLPLQFLSRCPSCFYNLMTLFCELTCSPHQSQFLNVTATEDYVDPETQENKTNVKELEYYIGQSFSNAMYNACRDVEAPSSNEKALGLLCGRDASACNATNWIEYMFNKDNGQAPFTITPIFSDLSILGMEPMRNATKGCNESVDEVTGPCSCQDCSMVCGPKPQPPPPPVPWRIFGLDAMYVVMWFSYVAFLLLFFGGLLAVWCHRRRYFVSEYTPIDSNIVFSVNTSDRGEASCCDPLGAAFDGCLRRMFTKWGAFCVRNPSCVIFFSLVFIAACSSGLVFVRVTTNPVELWSAPHSRARLEKEYFDKHFGPFFRTEQLIIQAPSTSVHIYEPYPAGSNVPFGPPLNKEILHQVLDLQIAIESITASYGNETVTLQDICVAPLSPYNNNCTIMSVLNYFQNSHSVLDHQVGDDFYVYADYHTHFLYCVRAPASLNDTSMLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVSNYYNNTEKLQRAQAWEKEFITFVENYRNPNLTISFIAERSIEDELNRESKSDVFTIAISYAIMFLYISLALGHIQSCSRLLVDSKISLGIAGILIVLSSVACSLGIFSYMGMPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQEETLDQQLGRILGEVAPTMFLSSFSETSAFFFGALSSMPAVHTFSLFAGMAVLIDFLLQITCFVSLLGLDIKRQEKNRLDILCCVRGADDGRGVQASESFLFRFFKNSFAPLLMKDWLRPVVVAAFVGVLSFSIAVVNKVEIGLDQSLSMPNDSYVIDYFKSLGQYLHSGPPVYFVLEEGHNYTTHRGQSMVCGGMGCDNDSLVQQIFNAAELDAYTRIGFAPSSWIDDYFDWITPQSSCCRLHNATHQFCNASVIDPTCVRCRPLTPEGKQRPQGKEFMEFLPMFLSDNPNPKCGKGGHAAYASAVNIIGDDTYVGATYFMTYHTVLKTSADYIDAMKKAQLVASNITETMRSKGSAYRVFPYIVFYVFYEQYLTIIDDTIFNLSVSLGSIFLVTLVVLGCELWSAVIMCITIAMILVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTMSTKGSRASRAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFEIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSVNKARRHTTQERYRGTERERLLNF
SIO_010081: Npc1
subclass of: SO_0000673
so part of: Npc1
location: complement(join(2927816..2927898,2928706..2928868,2930089..2930202,2931475..2931706,2932067..2932071,2932548..2932743,2937463..2937592,2938098..2938213,2938837..2939027,2939394..2939483,2939981..2940121,2940204..2940331,2941435..2941549,2942238..2942420,2942842..2943031,2945381..2945483,2955805..2955905,2958933..2959159,2960026..2960396,2960916..2960989,2962632..2962881,2963525..2963692,2968789..2968964,2971532..2971638,2972585..2972707,2985169..2985231))
location: region:2927816-2985231:-1
so has part: feature:2985169-2985231:-1:exon
so has part: feature:2972585-2972707:-1:exon
so has part: feature:2971532-2971638:-1:exon
so has part: feature:2968789-2968964:-1:exon
so has part: feature:2963525-2963692:-1:exon
so has part: feature:2962632-2962881:-1:exon
so has part: feature:2960916-2960989:-1:exon
so has part: feature:2960026-2960396:-1:exon
so has part: feature:2958933-2959159:-1:exon
so has part: feature:2955805-2955905:-1:exon
so has part: feature:2945381-2945483:-1:exon
so has part: feature:2942842-2943031:-1:exon
so has part: feature:2942238-2942420:-1:exon
so has part: feature:2941435-2941549:-1:exon
so has part: feature:2940204-2940331:-1:exon
so has part: feature:2939981-2940121:-1:exon
so has part: feature:2939394-2939483:-1:exon
so has part: feature:2938837-2939027:-1:exon
so has part: feature:2938098-2938213:-1:exon
so has part: feature:2937463-2937592:-1:exon
so has part: feature:2932548-2932743:-1:exon
so has part: feature:2932067-2932071:-1:exon
so has part: feature:2931475-2931706:-1:exon
so has part: feature:2930089-2930202:-1:exon
so has part: feature:2928706-2928868:-1:exon
so has part: feature:2927816-2927898:-1:exon

XP_036060944.1
type: Protein
SIO_000068: ncbiprotein

position:2927816:-1
position: 2927816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2985231:-1
position: 2985231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2985169-2985231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2972585-2972707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2971532-2971638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2968789-2968964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2963525-2963692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2962632-2962881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2960916-2960989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2960026-2960396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2958933-2959159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2955805-2955905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2945381-2945483:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2942842-2943031:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2942238-2942420:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2941435-2941549:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2940204-2940331:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2939981-2940121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2939394-2939483:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2938837-2939027:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2938098-2938213:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2937463-2937592:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2932548-2932743:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2932067-2932071:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2931475-2931706:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2930089-2930202:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2928706-2928868:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2927816-2927898:-1:exon

Npc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Npc1
product: NPC intracellular cholesterol transporter 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205050.1
SIO_010081: Npc1
subclass of: SO_0000673
so part of: Npc1
location: complement(join(2931618..2931706,2932542..2932743,2937463..2937592,2938098..2938213,2938837..2939027,2939394..2939483,2939981..2940121,2940204..2940331,2941435..2941549,2942238..2942420,2942842..2943031,2945381..2945483,2955805..2955905,2958933..2959159,2960026..2960396,2960916..2960989,2962632..2962881,2963525..2963692,2968789..2968964,2971532..2971638,2972585..2972707,2985169..2985349))
location: region:2931618-2985349:-1
so has part: feature:2985169-2985349:-1:exon
so has part: feature:2972585-2972707:-1:exon
so has part: feature:2971532-2971638:-1:exon
so has part: feature:2968789-2968964:-1:exon
so has part: feature:2963525-2963692:-1:exon
so has part: feature:2962632-2962881:-1:exon
so has part: feature:2960916-2960989:-1:exon
so has part: feature:2960026-2960396:-1:exon
so has part: feature:2958933-2959159:-1:exon
so has part: feature:2955805-2955905:-1:exon
so has part: feature:2945381-2945483:-1:exon
so has part: feature:2942842-2943031:-1:exon
so has part: feature:2942238-2942420:-1:exon
so has part: feature:2941435-2941549:-1:exon
so has part: feature:2940204-2940331:-1:exon
so has part: feature:2939981-2940121:-1:exon
so has part: feature:2939394-2939483:-1:exon
so has part: feature:2938837-2939027:-1:exon
so has part: feature:2938098-2938213:-1:exon
so has part: feature:2937463-2937592:-1:exon
so has part: feature:2932542-2932743:-1:exon
so has part: feature:2931618-2931706:-1:exon

position:2931618:-1
position: 2931618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2985169-2985349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2972585-2972707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2971532-2971638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2968789-2968964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2963525-2963692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2962632-2962881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2960916-2960989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2960026-2960396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2958933-2959159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2955805-2955905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2945381-2945483:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2942842-2943031:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2942238-2942420:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2941435-2941549:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2940204-2940331:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2939981-2940121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2939394-2939483:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2938837-2939027:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2938098-2938213:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2937463-2937592:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2932542-2932743:-1:exon

position:2932542:-1
position: 2932542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2931618-2931706:-1:exon

Npc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Npc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NPC intracellular cholesterol transporter 1 isoform X1
translation: MSARHPALGLLLLLLLLCPAQVFPQSCVWYGECGIAVGDKRYNCKYSGPPKPLPKDGYDLVQELCPGFFFGDVSLCCDVQQLQTLKNNLQLPLQFLSRCPSCFYNLMTLFCELTCSPHQSQFLNVTATEDYVDPETQENKTNVKELEYYIGQSFSNAMYNACRDVEAPSSNEKALGLLCGRDASACNATNWIEYMFNKDNGQAPFTITPIFSDLSILGMEPMRNATKGCNESVDEVTGPCSCQDCSMVCGPKPQPPPPPVPWRIFGLDAMYVVMWFSYVAFLLLFFGGLLAVWCHRRRYFVSEYTPIDSNIVFSVNTSDRGEASCCDPLGAAFDGCLRRMFTKWGAFCVRNPSCVIFFSLVFIAACSSGLVFVRVTTNPVELWSAPHSRARLEKEYFDKHFGPFFRTEQLIIQAPSTSVHIYEPYPAGSNVPFGPPLNKEILHQVLDLQIAIESITASYGNETVTLQDICVAPLSPYNNNCTIMSVLNYFQNSHSVLDHQVGDDFYVYADYHTHFLYCVRAPASLNDTSMLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVSNYYNNTEKLQRAQAWEKEFITFVENYRNPNLTISFIAERSIEDELNRESKSDVFTIAISYAIMFLYISLALGHIQSCSRLLVDSKISLGIAGILIVLSSVACSLGIFSYMGMPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQEETLDQQLGRILGEVAPTMFLSSFSETSAFFFGALSSMPAVHTFSLFAGMAVLIDFLLQITCFVSLLGLDIKRQEKNRLDILCCVRGADDGRGVQASESFLFRFFKNSFAPLLMKDWLRPVVVAAFVGVLSFSIAVVNKVEIGLDQSLSMPNDSYVIDYFKSLGQYLHSGPPVYFVLEEGHNYTTHRGQSMVCGGMGCDNDSLVQQIFNAAELDAYTRIGFAPSSWIDDYFDWITPQSSCCRLHNATHQFCNASVIDPTCVRCRPLTPEGKQRPQGKEFMEFLPMFLSDNPNPKCGKGGHAAYASAVNIIGDDTYVGATYFMTYHTVLKTSADYIDAMKKAQLVASNITETMRSKGSAYRVFPVQCVLRLL
SIO_010081: Npc1
subclass of: SO_0000673
so part of: Npc1
location: complement(join(2931686..2931706,2932542..2932743,2937463..2937592,2938098..2938213,2938837..2939027,2939394..2939483,2939981..2940121,2940204..2940331,2941435..2941549,2942238..2942420,2942842..2943031,2945381..2945483,2955805..2955905,2958933..2959159,2960026..2960396,2960916..2960989,2962632..2962881,2963525..2963692,2968789..2968964,2971532..2971638,2972585..2972707,2985169..2985231))
location: region:2931686-2985231:-1
so has part: feature:2985169-2985231:-1:exon
so has part: feature:2972585-2972707:-1:exon
so has part: feature:2971532-2971638:-1:exon
so has part: feature:2968789-2968964:-1:exon
so has part: feature:2963525-2963692:-1:exon
so has part: feature:2962632-2962881:-1:exon
so has part: feature:2960916-2960989:-1:exon
so has part: feature:2960026-2960396:-1:exon
so has part: feature:2958933-2959159:-1:exon
so has part: feature:2955805-2955905:-1:exon
so has part: feature:2945381-2945483:-1:exon
so has part: feature:2942842-2943031:-1:exon
so has part: feature:2942238-2942420:-1:exon
so has part: feature:2941435-2941549:-1:exon
so has part: feature:2940204-2940331:-1:exon
so has part: feature:2939981-2940121:-1:exon
so has part: feature:2939394-2939483:-1:exon
so has part: feature:2938837-2939027:-1:exon
so has part: feature:2938098-2938213:-1:exon
so has part: feature:2937463-2937592:-1:exon
so has part: feature:2932542-2932743:-1:exon
so has part: feature:2931686-2931706:-1:exon

XP_036060943.1
type: Protein
SIO_000068: ncbiprotein

position:2931686:-1
position: 2931686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2985169-2985231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2972585-2972707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2971532-2971638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2968789-2968964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2963525-2963692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2962632-2962881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2960916-2960989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2960026-2960396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2958933-2959159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2955805-2955905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2945381-2945483:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2942842-2943031:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2942238-2942420:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2941435-2941549:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2940204-2940331:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2939981-2940121:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2939394-2939483:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2938837-2939027:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2938098-2938213:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2937463-2937592:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2932542-2932743:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2931686-2931706:-1:exon

Ankrd29
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Ankrd29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2997450..3048412)
location: region:2997450-3048412:-1
so has part: feature:2997450-3048412:-1:exon
subclass of: SO_0000010

118595035
type: Gene
SIO_000068: ncbigene

position:2997450:-1
position: 2997450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3048412:-1
position: 3048412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2997450-3048412:-1:exon

Ankrd29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ankrd29
product: ankyrin repeat domain 29, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205302.1
SIO_010081: Ankrd29
subclass of: SO_0000673
so part of: Ankrd29
location: complement(join(2997450..2999686,3004876..3004974,3006577..3006672,3007866..3007964,3017374..3017472,3021819..3021917,3024537..3024635,3029618..3029716,3035530..3035640,3048356..3048412))
location: region:2997450-3048412:-1
so has part: feature:3048356-3048412:-1:exon
so has part: feature:3035530-3035640:-1:exon
so has part: feature:3029618-3029716:-1:exon
so has part: feature:3024537-3024635:-1:exon
so has part: feature:3021819-3021917:-1:exon
so has part: feature:3017374-3017472:-1:exon
so has part: feature:3007866-3007964:-1:exon
so has part: feature:3006577-3006672:-1:exon
so has part: feature:3004876-3004974:-1:exon
so has part: feature:2997450-2999686:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3048356-3048412:-1:exon

position:3048356:-1
position: 3048356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3035530-3035640:-1:exon

position:3035530:-1
position: 3035530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3035640:-1
position: 3035640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3029618-3029716:-1:exon

position:3029618:-1
position: 3029618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3029716:-1
position: 3029716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3024537-3024635:-1:exon

position:3024537:-1
position: 3024537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3024635:-1
position: 3024635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3021819-3021917:-1:exon

position:3021819:-1
position: 3021819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3021917:-1
position: 3021917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3017374-3017472:-1:exon

position:3017374:-1
position: 3017374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3017472:-1
position: 3017472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3007866-3007964:-1:exon

position:3007866:-1
position: 3007866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3007964:-1
position: 3007964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3006577-3006672:-1:exon

position:3006577:-1
position: 3006577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3006672:-1
position: 3006672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3004876-3004974:-1:exon

position:3004876:-1
position: 3004876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3004974:-1
position: 3004974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2997450-2999686:-1:exon

position:2999686:-1
position: 2999686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ankrd29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ankrd29
product: ankyrin repeat domain 29, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_036205301.1
SIO_010081: Ankrd29
subclass of: SO_0000673
so part of: Ankrd29
location: complement(join(2997450..2999686,3004876..3004974,3006577..3006672,3007866..3007964,3017374..3017472,3021819..3021917,3024537..3024635,3029618..3029716,3035515..3035640,3048356..3048412))
location: region:2997450-3048412:-1
so has part: feature:3048356-3048412:-1:exon
so has part: feature:3035515-3035640:-1:exon
so has part: feature:3029618-3029716:-1:exon
so has part: feature:3024537-3024635:-1:exon
so has part: feature:3021819-3021917:-1:exon
so has part: feature:3017374-3017472:-1:exon
so has part: feature:3007866-3007964:-1:exon
so has part: feature:3006577-3006672:-1:exon
so has part: feature:3004876-3004974:-1:exon
so has part: feature:2997450-2999686:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3048356-3048412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3035515-3035640:-1:exon

position:3035515:-1
position: 3035515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3029618-3029716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3024537-3024635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3021819-3021917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3017374-3017472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3007866-3007964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3006577-3006672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3004876-3004974:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2997450-2999686:-1:exon

Ankrd29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ankrd29
product: ankyrin repeat domain 29, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_036205303.1
SIO_010081: Ankrd29
subclass of: SO_0000673
so part of: Ankrd29
location: complement(join(2997450..2999686,3004876..3004974,3006577..3006672,3007866..3007964,3017374..3017472,3021819..3021917,3024537..3024635,3029618..3029716,3048356..3048407))
location: region:2997450-3048407:-1
so has part: feature:3048356-3048407:-1:exon
so has part: feature:3029618-3029716:-1:exon
so has part: feature:3024537-3024635:-1:exon
so has part: feature:3021819-3021917:-1:exon
so has part: feature:3017374-3017472:-1:exon
so has part: feature:3007866-3007964:-1:exon
so has part: feature:3006577-3006672:-1:exon
so has part: feature:3004876-3004974:-1:exon
so has part: feature:2997450-2999686:-1:exon

position:3048407:-1
position: 3048407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3048356-3048407:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3029618-3029716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3024537-3024635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3021819-3021917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3017374-3017472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3007866-3007964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3006577-3006672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3004876-3004974:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2997450-2999686:-1:exon

Ankrd29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ankrd29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 29 isoform X3
translation: MSFKHGTTLLMVASYAGHIDCVRELVLQGADINLQRESGTTALFFAAQQGHNDVVRFLFGFGASTEHRTKDGGTALLAASQYGHMPVVETLLKHGANIHDQLYDGATALFLAAQGGYLDVIRLLLSSGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGADRDAARNDGTTALLKAANKGHSDVIEELLKFSPALGILKNGTSALHAAVLSGNMKTVALLLEAGADPALRNQANELPAELTKNERILHLLRSKDGPGKNEFGSILDR
SIO_010081: Ankrd29
subclass of: SO_0000673
so part of: Ankrd29
location: complement(join(2999579..2999686,3004876..3004974,3006577..3006672,3007866..3007964,3017374..3017472,3021819..3021917,3024537..3024635,3029618..3029716,3048356..3048367))
location: region:2999579-3048367:-1
so has part: feature:3048356-3048367:-1:exon
so has part: feature:3029618-3029716:-1:exon
so has part: feature:3024537-3024635:-1:exon
so has part: feature:3021819-3021917:-1:exon
so has part: feature:3017374-3017472:-1:exon
so has part: feature:3007866-3007964:-1:exon
so has part: feature:3006577-3006672:-1:exon
so has part: feature:3004876-3004974:-1:exon
so has part: feature:2999579-2999686:-1:exon

XP_036061196.1
type: Protein
SIO_000068: ncbiprotein

position:2999579:-1
position: 2999579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3048367:-1
position: 3048367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3048356-3048367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3029618-3029716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3024537-3024635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3021819-3021917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3017374-3017472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3007866-3007964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3006577-3006672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3004876-3004974:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2999579-2999686:-1:exon

Ankrd29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ankrd29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 29 isoform X2
translation: MSFKKETPLANAAFWAARRGNLALLKLLLNSGRVDVDCRDSHGTTLLMVASYAGHIDCVRELVLQGADINLQRESGTTALFFAAQQGHNDVVRFLFGFGASTEHRTKDGGTALLAASQYGHMPVVETLLKHGANIHDQLYDGATALFLAAQGGYLDVIRLLLSSGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGADRDAARNDGTTALLKAANKGHSDVIEELLKFSPALGILKNGTSALHAAVLSGNMKTVALLLEAGADPALRNQANELPAELTKNERILHLLRSKDGPGKNEFGSILDR
SIO_010081: Ankrd29
subclass of: SO_0000673
so part of: Ankrd29
location: complement(join(2999579..2999686,3004876..3004974,3006577..3006672,3007866..3007964,3017374..3017472,3021819..3021917,3024537..3024635,3029618..3029716,3035530..3035640,3048356..3048367))
location: region:2999579-3048367:-1
so has part: feature:3048356-3048367:-1:exon
so has part: feature:3035530-3035640:-1:exon
so has part: feature:3029618-3029716:-1:exon
so has part: feature:3024537-3024635:-1:exon
so has part: feature:3021819-3021917:-1:exon
so has part: feature:3017374-3017472:-1:exon
so has part: feature:3007866-3007964:-1:exon
so has part: feature:3006577-3006672:-1:exon
so has part: feature:3004876-3004974:-1:exon
so has part: feature:2999579-2999686:-1:exon

XP_036061195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3048356-3048367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3035530-3035640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029618-3029716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3024537-3024635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3021819-3021917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3017374-3017472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3007866-3007964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3006577-3006672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3004876-3004974:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2999579-2999686:-1:exon

Ankrd29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ankrd29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 29 isoform X1
translation: MSFKKETPLANAAFWAARRGNLALLKLLLNSGRVDVDCRDSVWTDMHGTTLLMVASYAGHIDCVRELVLQGADINLQRESGTTALFFAAQQGHNDVVRFLFGFGASTEHRTKDGGTALLAASQYGHMPVVETLLKHGANIHDQLYDGATALFLAAQGGYLDVIRLLLSSGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGADRDAARNDGTTALLKAANKGHSDVIEELLKFSPALGILKNGTSALHAAVLSGNMKTVALLLEAGADPALRNQANELPAELTKNERILHLLRSKDGPGKNEFGSILDR
SIO_010081: Ankrd29
subclass of: SO_0000673
so part of: Ankrd29
location: complement(join(2999579..2999686,3004876..3004974,3006577..3006672,3007866..3007964,3017374..3017472,3021819..3021917,3024537..3024635,3029618..3029716,3035515..3035640,3048356..3048367))
location: region:2999579-3048367:-1
so has part: feature:3048356-3048367:-1:exon
so has part: feature:3035515-3035640:-1:exon
so has part: feature:3029618-3029716:-1:exon
so has part: feature:3024537-3024635:-1:exon
so has part: feature:3021819-3021917:-1:exon
so has part: feature:3017374-3017472:-1:exon
so has part: feature:3007866-3007964:-1:exon
so has part: feature:3006577-3006672:-1:exon
so has part: feature:3004876-3004974:-1:exon
so has part: feature:2999579-2999686:-1:exon

XP_036061194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3048356-3048367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3035515-3035640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029618-3029716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3024537-3024635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3021819-3021917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3017374-3017472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3007866-3007964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3006577-3006672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3004876-3004974:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2999579-2999686:-1:exon

Lama3
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Lama3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3081555..3333867
location: region:3081555-3333867:1
so has part: feature:3081555-3333867:1:exon
subclass of: SO_0000010

118594778
type: Gene
SIO_000068: ncbigene

position:3081555:1
position: 3081555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3333867:1
position: 3333867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3081555-3333867:1:exon

Lama3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Lama3
product: laminin subunit alpha 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036204961.1
SIO_010081: Lama3
subclass of: SO_0000673
so part of: Lama3
location: join(3081555..3081875,3105899..3106051,3145279..3145396,3146054..3146172,3147875..3148045,3150331..3150422,3152976..3153091,3155466..3155584,3161404..3161495,3163331..3163393,3182269..3182403,3188817..3188955,3190632..3190678,3192107..3192206,3192972..3193024,3193248..3193353,3194261..3194360,3196232..3196388,3203057..3203189,3205074..3205216,3207387..3207484,3208114..3208267,3213886..3214046,3218011..3218119,3219832..3219929,3222034..3222178,3225598..3225724,3225809..3225948,3228492..3228607,3234730..3234941,3235775..3235979,3247360..3247504,3248127..3248267,3251020..3251181,3253899..3253997,3255769..3255852,3258856..3259086,3262938..3263051,3268591..3268700,3271805..3271885,3275149..3275255,3277030..3277080,3277751..3277902,3283681..3283791,3283898..3284009,3284195..3284362,3285476..3285672,3286960..3287076,3287702..3287856,3288153..3288294,3289059..3289161,3290874..3290990,3291076..3291255,3292847..3292989,3296131..3296301,3297652..3297803,3297945..3298107,3298520..3298653,3300324..3300468,3303043..3303162,3303941..3304074,3307347..3307464,3307731..3307871,3310545..3310684,3311633..3311764,3312808..3312961,3317805..3317974,3321957..3322140,3324524..3324664,3327992..3328151,3328253..3328383,3330605..3330698,3332702..3332821,3333517..3333867)
location: region:3081555-3333867:1
so has part: feature:3081555-3081875:1:exon
so has part: feature:3105899-3106051:1:exon
so has part: feature:3145279-3145396:1:exon
so has part: feature:3146054-3146172:1:exon
so has part: feature:3147875-3148045:1:exon
so has part: feature:3150331-3150422:1:exon
so has part: feature:3152976-3153091:1:exon
so has part: feature:3155466-3155584:1:exon
so has part: feature:3161404-3161495:1:exon
so has part: feature:3163331-3163393:1:exon
so has part: feature:3182269-3182403:1:exon
so has part: feature:3188817-3188955:1:exon
so has part: feature:3190632-3190678:1:exon
so has part: feature:3192107-3192206:1:exon
so has part: feature:3192972-3193024:1:exon
so has part: feature:3193248-3193353:1:exon
so has part: feature:3194261-3194360:1:exon
so has part: feature:3196232-3196388:1:exon
so has part: feature:3203057-3203189:1:exon
so has part: feature:3205074-3205216:1:exon
so has part: feature:3207387-3207484:1:exon
so has part: feature:3208114-3208267:1:exon
so has part: feature:3213886-3214046:1:exon
so has part: feature:3218011-3218119:1:exon
so has part: feature:3219832-3219929:1:exon
so has part: feature:3222034-3222178:1:exon
so has part: feature:3225598-3225724:1:exon
so has part: feature:3225809-3225948:1:exon
so has part: feature:3228492-3228607:1:exon
so has part: feature:3234730-3234941:1:exon
so has part: feature:3235775-3235979:1:exon
so has part: feature:3247360-3247504:1:exon
so has part: feature:3248127-3248267:1:exon
so has part: feature:3251020-3251181:1:exon
so has part: feature:3253899-3253997:1:exon
so has part: feature:3255769-3255852:1:exon
so has part: feature:3258856-3259086:1:exon
so has part: feature:3262938-3263051:1:exon
so has part: feature:3268591-3268700:1:exon
so has part: feature:3271805-3271885:1:exon
so has part: feature:3275149-3275255:1:exon
so has part: feature:3277030-3277080:1:exon
so has part: feature:3277751-3277902:1:exon
so has part: feature:3283681-3283791:1:exon
so has part: feature:3283898-3284009:1:exon
so has part: feature:3284195-3284362:1:exon
so has part: feature:3285476-3285672:1:exon
so has part: feature:3286960-3287076:1:exon
so has part: feature:3287702-3287856:1:exon
so has part: feature:3288153-3288294:1:exon
so has part: feature:3289059-3289161:1:exon
so has part: feature:3290874-3290990:1:exon
so has part: feature:3291076-3291255:1:exon
so has part: feature:3292847-3292989:1:exon
so has part: feature:3296131-3296301:1:exon
so has part: feature:3297652-3297803:1:exon
so has part: feature:3297945-3298107:1:exon
so has part: feature:3298520-3298653:1:exon
so has part: feature:3300324-3300468:1:exon
so has part: feature:3303043-3303162:1:exon
so has part: feature:3303941-3304074:1:exon
so has part: feature:3307347-3307464:1:exon
so has part: feature:3307731-3307871:1:exon
so has part: feature:3310545-3310684:1:exon
so has part: feature:3311633-3311764:1:exon
so has part: feature:3312808-3312961:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3081555-3081875:1:exon

position:3081875:1
position: 3081875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3105899-3106051:1:exon

position:3105899:1
position: 3105899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3106051:1
position: 3106051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3145279-3145396:1:exon

position:3145279:1
position: 3145279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3145396:1
position: 3145396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3146054-3146172:1:exon

position:3146054:1
position: 3146054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3146172:1
position: 3146172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3147875-3148045:1:exon

position:3147875:1
position: 3147875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3148045:1
position: 3148045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3150331-3150422:1:exon

position:3150331:1
position: 3150331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3150422:1
position: 3150422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3152976-3153091:1:exon

position:3152976:1
position: 3152976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3153091:1
position: 3153091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3155466-3155584:1:exon

position:3155466:1
position: 3155466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3155584:1
position: 3155584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3161404-3161495:1:exon

position:3161404:1
position: 3161404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3161495:1
position: 3161495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3163331-3163393:1:exon

position:3163331:1
position: 3163331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3163393:1
position: 3163393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3182269-3182403:1:exon

position:3182269:1
position: 3182269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3182403:1
position: 3182403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3188817-3188955:1:exon

position:3188817:1
position: 3188817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3188955:1
position: 3188955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3190632-3190678:1:exon

position:3190632:1
position: 3190632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3190678:1
position: 3190678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3192107-3192206:1:exon

position:3192107:1
position: 3192107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3192206:1
position: 3192206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3192972-3193024:1:exon

position:3192972:1
position: 3192972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3193024:1
position: 3193024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3193248-3193353:1:exon

position:3193248:1
position: 3193248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3193353:1
position: 3193353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3194261-3194360:1:exon

position:3194261:1
position: 3194261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3194360:1
position: 3194360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3196232-3196388:1:exon

position:3196232:1
position: 3196232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3196388:1
position: 3196388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3203057-3203189:1:exon

position:3203057:1
position: 3203057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3203189:1
position: 3203189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3205074-3205216:1:exon

position:3205074:1
position: 3205074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3205216:1
position: 3205216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3207387-3207484:1:exon

position:3207387:1
position: 3207387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3207484:1
position: 3207484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3208114-3208267:1:exon

position:3208114:1
position: 3208114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3208267:1
position: 3208267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3213886-3214046:1:exon

position:3213886:1
position: 3213886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3214046:1
position: 3214046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3218011-3218119:1:exon

position:3218011:1
position: 3218011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3218119:1
position: 3218119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3219832-3219929:1:exon

position:3219832:1
position: 3219832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3219929:1
position: 3219929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3222034-3222178:1:exon

position:3222034:1
position: 3222034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3222178:1
position: 3222178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3225598-3225724:1:exon

position:3225598:1
position: 3225598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3225724:1
position: 3225724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3225809-3225948:1:exon

position:3225809:1
position: 3225809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3225948:1
position: 3225948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3228492-3228607:1:exon

position:3228492:1
position: 3228492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3228607:1
position: 3228607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3234730-3234941:1:exon

position:3234730:1
position: 3234730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3234941:1
position: 3234941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3235775-3235979:1:exon

position:3235775:1
position: 3235775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3235979:1
position: 3235979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3247360-3247504:1:exon

position:3247360:1
position: 3247360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3247504:1
position: 3247504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3248127-3248267:1:exon

position:3248127:1
position: 3248127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3248267:1
position: 3248267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:3251020-3251181:1:exon

position:3251020:1
position: 3251020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3251181:1
position: 3251181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:3253899-3253997:1:exon

position:3253899:1
position: 3253899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3253997:1
position: 3253997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:3255769-3255852:1:exon

position:3255769:1
position: 3255769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3255852:1
position: 3255852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:3258856-3259086:1:exon

position:3258856:1
position: 3258856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3259086:1
position: 3259086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:3262938-3263051:1:exon

position:3262938:1
position: 3262938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3263051:1
position: 3263051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:3268591-3268700:1:exon

position:3268591:1
position: 3268591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3268700:1
position: 3268700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:3271805-3271885:1:exon

position:3271805:1
position: 3271805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3271885:1
position: 3271885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:3275149-3275255:1:exon

position:3275149:1
position: 3275149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3275255:1
position: 3275255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:3277030-3277080:1:exon

position:3277030:1
position: 3277030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3277080:1
position: 3277080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:3277751-3277902:1:exon

position:3277751:1
position: 3277751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3277902:1
position: 3277902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:3283681-3283791:1:exon

position:3283681:1
position: 3283681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3283791:1
position: 3283791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:3283898-3284009:1:exon

position:3283898:1
position: 3283898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3284009:1
position: 3284009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:3284195-3284362:1:exon

position:3284195:1
position: 3284195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3284362:1
position: 3284362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:3285476-3285672:1:exon

position:3285476:1
position: 3285476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3285672:1
position: 3285672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:3286960-3287076:1:exon

position:3286960:1
position: 3286960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3287076:1
position: 3287076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:3287702-3287856:1:exon

position:3287702:1
position: 3287702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3287856:1
position: 3287856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:3288153-3288294:1:exon

position:3288153:1
position: 3288153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3288294:1
position: 3288294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:3289059-3289161:1:exon

position:3289059:1
position: 3289059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3289161:1
position: 3289161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:3290874-3290990:1:exon

position:3290874:1
position: 3290874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3290990:1
position: 3290990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:3291076-3291255:1:exon

position:3291076:1
position: 3291076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3291255:1
position: 3291255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:3292847-3292989:1:exon

position:3292847:1
position: 3292847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3292989:1
position: 3292989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:3296131-3296301:1:exon

position:3296131:1
position: 3296131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3296301:1
position: 3296301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:3297652-3297803:1:exon

position:3297652:1
position: 3297652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3297803:1
position: 3297803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:3297945-3298107:1:exon

position:3297945:1
position: 3297945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3298107:1
position: 3298107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:3298520-3298653:1:exon

position:3298520:1
position: 3298520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3298653:1
position: 3298653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 59
SIO_000628: feature:3300324-3300468:1:exon

position:3300324:1
position: 3300324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3300468:1
position: 3300468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:3303043-3303162:1:exon

position:3303043:1
position: 3303043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3303162:1
position: 3303162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 61
SIO_000628: feature:3303941-3304074:1:exon

position:3303941:1
position: 3303941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3304074:1
position: 3304074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 62
SIO_000628: feature:3307347-3307464:1:exon

position:3307347:1
position: 3307347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3307464:1
position: 3307464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 63
SIO_000628: feature:3307731-3307871:1:exon

position:3307731:1
position: 3307731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3307871:1
position: 3307871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 64
SIO_000628: feature:3310545-3310684:1:exon

position:3310545:1
position: 3310545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3310684:1
position: 3310684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 65
SIO_000628: feature:3311633-3311764:1:exon

position:3311633:1
position: 3311633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3311764:1
position: 3311764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 66
SIO_000628: feature:3312808-3312961:1:exon

position:3312808:1
position: 3312808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3312961:1
position: 3312961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 67
SIO_000628: feature:3317805-3317974:1:exon

position:3317805:1
position: 3317805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3317974:1
position: 3317974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 68
SIO_000628: feature:3321957-3322140:1:exon

position:3321957:1
position: 3321957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3322140:1
position: 3322140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 69
SIO_000628: feature:3324524-3324664:1:exon

position:3324524:1
position: 3324524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3324664:1
position: 3324664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 70
SIO_000628: feature:3327992-3328151:1:exon

position:3327992:1
position: 3327992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3328151:1
position: 3328151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 71
SIO_000628: feature:3328253-3328383:1:exon

position:3328253:1
position: 3328253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3328383:1
position: 3328383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 72
SIO_000628: feature:3330605-3330698:1:exon

position:3330605:1
position: 3330605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3330698:1
position: 3330698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 73
SIO_000628: feature:3332702-3332821:1:exon

position:3332702:1
position: 3332702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3332821:1
position: 3332821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 74
SIO_000628: feature:3333517-3333867:1:exon

position:3333517:1
position: 3333517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Lama3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Lama3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: laminin subunit alpha-3
translation: MAVAPGWAPRSSTRLLTLLLLLLLLRMSPCWSMVAQDPPAAALSLHPPYFNLAQAARIWATATCGERGPEVARPRPELYCKLVGGPTAQGSGHTIQGQFCDYCNSEDSRKAHPATHAIDGSERWWQSPPLSSGIQYNEVNLTLDLGQLFHVAYVLIKFANSPRPDLWVLERSVDFGSTYSPWQYFAHSRRDCLEQFGQEANMAITQDDQVLCVTEYSRIVPLENGEVVVSLINGRPGAKNFAFSDTLRQFTKATNIRLRFLRTNTLLGHLISKAERDPTVTRRYYYSIKDISIGGRCVCNGHADECTADNPEKQFRCECQHHTCGETCNRCCAGYNQRRWQPAAPGQHSECEACNCHGHATDCYYDPEVEQQQASLNTKGTYAGGGVCIDCQHNTAGVNCEECAKGYYRPSGMPVDALHGCIRIPVSPVYTLSPEDPVAGNIKGCDCNLEGVLPEICDDHGRCLCRPGVEGPRCASCRSGSYSFPICQACQCSTIGSYPVPCDPVTGQCECLPGVTGRQCDRCLSGAYDFPYCRGSSSICDPAGTVDSSLGYCQCKLHVASPTCSVCKPLYWNLAKENPSGCSECQCHEAGTVSGIGECGQGDGVCSCKAHVTGDACDACEDGYFALEKSNYFGCQGCQCDIGGSLTTMCSGPSGKCQCREHVVGKECQRPENNYYFPDLHHMKHEVEDGAGPNGRDLRFGFDPMVFPEFSWRGYALMTSVQNEVRMRLTVRKSNLSLFHIILRYVNPGTEEVSGRIIVYPSWAQSDVSQSKEITFPPSKEPAFVTVPGKGFADPFSITPGTWITCIQVEGVLLDYLVLLPRDYYDALTLQVPVTEPCARSGAPQDSCLLYQHLPVTRFSCTLACEATHFLLDGELRPVAVRQPTPAHPAMVDLSGREVELHLRLRVPQIGHYVIMLEYATEVDQLFVVDVNLKSPRSAFTGQVNIYSCKYSILCRSVVIDSLSRTAVNELLADADIELKVHMAKFLLYHICLIPTEEFSTEYLRPQIHCVANYGPSANPSVTCVSLAHETPPTALVLDARSRGPLSLLPQEPSPPADVTEGVPLKAPRNQVTLKGLIPHLGRYVFVIHFYQAEHPTFSTEVFVDGGGRWSGSFLASFCPHLLGCRNQVLSDGQVEFDISEAEVAVTVTVPEGKSLKLVRVLVVPAENYDYQILHKTSVDKSFEFISNCGGDSFYIDPQAASGFCKNSARSLVAFYHNGALPCECHPVGAASRHCSPEGGQCPCRPNIIGRQCTRCATGHYGFPHCKPCNCGRRLCEEVTGKCLCPPRTVRPECELCEMNSFNFHPLAGCEVCNCSRKGTMEAAISECDRDSGQCRCKPRITGRRCDRCAPGFHQFPECVPCSCNRDGTEPQVCDPGTGACMCKENVEGPECHVCRRGSFYLHPANPKGCTTCFCFGVNTDCQSSHKQRAKFVDMMGWRLQTADGVDIPVSFNPGSNSVVADLQELPSTVRSASWVSPPSYLGDKVSSYGGYLTYQAKSFGLPGDMVLLEKQPDVQLTGQHMSIIHKESSDPRPDRLHHGRLQLVEGNFRHEGNSAPVSREELMTVLSQLEGLYIRGLYFTETQRLTLGEVGLEEASNTGSGPRAHLVEMCVCPPDYTGDSCQACRPGYYRDNKSPPTGRCVPCNCNGHSNRCQDGSGMCINCQHNTAGEHCEHCKEGHYGNAIQGSCRVCPCPHTNSFATGCTVDGGNVRCACKPGYTGAQCERCAPGYFGNPQQFGGSCQPCNCNSNGPLGTCDPLTGDCISQEPRDGTPAEDCDDCNSCVMTLLDDLATMGEELRLVKSKLQGLSVSTGVLEQIRHVETQAKDLRSQLLGFRSAISSHGSKLEGLEKELGHLNREFETVQEKAQVNSRKAQTLYNNIDRTTQSAKELDTKIKNVIQNVHILLKQIARPGGEGADVLVGDWSRELAEAQRMIRELRGRDFRKHLREAEAEKTEAQRLLNRLRTWLETHQVENNGLLRNIRDSLSDYEAKLQDLRAVLQ…
SIO_010081: Lama3
subclass of: SO_0000673
so part of: Lama3
location: join(3081588..3081875,3105899..3106051,3145279..3145396,3146054..3146172,3147875..3148045,3150331..3150422,3152976..3153091,3155466..3155584,3161404..3161495,3163331..3163393,3182269..3182403,3188817..3188955,3190632..3190678,3192107..3192206,3192972..3193024,3193248..3193353,3194261..3194360,3196232..3196388,3203057..3203189,3205074..3205216,3207387..3207484,3208114..3208267,3213886..3214046,3218011..3218119,3219832..3219929,3222034..3222178,3225598..3225724,3225809..3225948,3228492..3228607,3234730..3234941,3235775..3235979,3247360..3247504,3248127..3248267,3251020..3251181,3253899..3253997,3255769..3255852,3258856..3259086,3262938..3263051,3268591..3268700,3271805..3271885,3275149..3275255,3277030..3277080,3277751..3277902,3283681..3283791,3283898..3284009,3284195..3284362,3285476..3285672,3286960..3287076,3287702..3287856,3288153..3288294,3289059..3289161,3290874..3290990,3291076..3291255,3292847..3292989,3296131..3296301,3297652..3297803,3297945..3298107,3298520..3298653,3300324..3300468,3303043..3303162,3303941..3304074,3307347..3307464,3307731..3307871,3310545..3310684,3311633..3311764,3312808..3312961,3317805..3317974,3321957..3322140,3324524..3324664,3327992..3328151,3328253..3328383,3330605..3330698,3332702..3332821,3333517..3333662)
location: region:3081588-3333662:1
so has part: feature:3081588-3081875:1:exon
so has part: feature:3105899-3106051:1:exon
so has part: feature:3145279-3145396:1:exon
so has part: feature:3146054-3146172:1:exon
so has part: feature:3147875-3148045:1:exon
so has part: feature:3150331-3150422:1:exon
so has part: feature:3152976-3153091:1:exon
so has part: feature:3155466-3155584:1:exon
so has part: feature:3161404-3161495:1:exon
so has part: feature:3163331-3163393:1:exon
so has part: feature:3182269-3182403:1:exon
so has part: feature:3188817-3188955:1:exon
so has part: feature:3190632-3190678:1:exon
so has part: feature:3192107-3192206:1:exon
so has part: feature:3192972-3193024:1:exon
so has part: feature:3193248-3193353:1:exon
so has part: feature:3194261-3194360:1:exon
so has part: feature:3196232-3196388:1:exon
so has part: feature:3203057-3203189:1:exon
so has part: feature:3205074-3205216:1:exon
so has part: feature:3207387-3207484:1:exon
so has part: feature:3208114-3208267:1:exon
so has part: feature:3213886-3214046:1:exon
so has part: feature:3218011-3218119:1:exon
so has part: feature:3219832-3219929:1:exon
so has part: feature:3222034-3222178:1:exon
so has part: feature:3225598-3225724:1:exon
so has part: feature:3225809-3225948:1:exon
so has part: feature:3228492-3228607:1:exon
so has part: feature:3234730-3234941:1:exon
so has part: feature:3235775-3235979:1:exon
so has part: feature:3247360-3247504:1:exon
so has part: feature:3248127-3248267:1:exon
so has part: feature:3251020-3251181:1:exon
so has part: feature:3253899-3253997:1:exon
so has part: feature:3255769-3255852:1:exon
so has part: feature:3258856-3259086:1:exon
so has part: feature:3262938-3263051:1:exon
so has part: feature:3268591-3268700:1:exon
so has part: feature:3271805-3271885:1:exon
so has part: feature:3275149-3275255:1:exon
so has part: feature:3277030-3277080:1:exon
so has part: feature:3277751-3277902:1:exon
so has part: feature:3283681-3283791:1:exon
so has part: feature:3283898-3284009:1:exon
so has part: feature:3284195-3284362:1:exon
so has part: feature:3285476-3285672:1:exon
so has part: feature:3286960-3287076:1:exon
so has part: feature:3287702-3287856:1:exon
so has part: feature:3288153-3288294:1:exon
so has part: feature:3289059-3289161:1:exon
so has part: feature:3290874-3290990:1:exon
so has part: feature:3291076-3291255:1:exon
so has part: feature:3292847-3292989:1:exon
so has part: feature:3296131-3296301:1:exon
so has part: feature:3297652-3297803:1:exon
so has part: feature:3297945-3298107:1:exon
so has part: feature:3298520-3298653:1:exon
so has part: feature:3300324-3300468:1:exon
so has part: feature:3303043-3303162:1:exon
so has part: feature:3303941-3304074:1:exon
so has part: feature:3307347-3307464:1:exon
so has part: feature:3307731-3307871:1:exon
so has part: feature:3310545-3310684:1:exon
so has part: feature:3311633-3311764:1:exon

XP_036060854.1
type: Protein
SIO_000068: ncbiprotein

position:3081588:1
position: 3081588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3333662:1
position: 3333662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3081588-3081875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3105899-3106051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3145279-3145396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3146054-3146172:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3147875-3148045:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3150331-3150422:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3152976-3153091:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3155466-3155584:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3161404-3161495:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3163331-3163393:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3182269-3182403:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3188817-3188955:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3190632-3190678:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3192107-3192206:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3192972-3193024:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3193248-3193353:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3194261-3194360:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3196232-3196388:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3203057-3203189:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3205074-3205216:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3207387-3207484:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3208114-3208267:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3213886-3214046:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3218011-3218119:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3219832-3219929:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3222034-3222178:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3225598-3225724:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3225809-3225948:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3228492-3228607:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3234730-3234941:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3235775-3235979:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3247360-3247504:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3248127-3248267:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3251020-3251181:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3253899-3253997:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:3255769-3255852:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:3258856-3259086:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:3262938-3263051:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:3268591-3268700:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:3271805-3271885:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:3275149-3275255:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:3277030-3277080:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:3277751-3277902:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:3283681-3283791:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:3283898-3284009:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:3284195-3284362:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:3285476-3285672:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:3286960-3287076:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:3287702-3287856:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:3288153-3288294:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:3289059-3289161:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:3290874-3290990:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:3291076-3291255:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:3292847-3292989:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:3296131-3296301:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:3297652-3297803:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:3297945-3298107:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:3298520-3298653:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:3300324-3300468:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:3303043-3303162:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:3303941-3304074:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:3307347-3307464:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:3307731-3307871:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:3310545-3310684:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:3311633-3311764:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:3312808-3312961:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:3317805-3317974:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:3321957-3322140:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:3324524-3324664:1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:3327992-3328151:1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:3328253-3328383:1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:3330605-3330698:1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:3332702-3332821:1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:3333517-3333662:1:exon

Trnas-uga
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Trnas-uga
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3145172..3145239)
location: region:3145172-3145239:-1
so has part: feature:3145172-3145239:-1:exon
subclass of: SO_0000663

118595101
type: Gene
SIO_000068: ncbigene

position:3145172:-1
position: 3145172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3145239:-1
position: 3145239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3145172-3145239:-1:exon

Trnas-uga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 38674
gene: Trnas-uga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA serine (anticodon UGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3145209..3145211),aa:Ser, seq:tga)
SIO_010081: Trnas-uga
subclass of: SO_0000673
so part of: Trnas-uga
location: complement(3145172..3145239)
location: region:3145172-3145239:-1
so has part: feature:3145172-3145239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3145172-3145239:-1:exon

Ttc39c
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Ttc39c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3415875..3500476
location: region:3415875-3500476:1
so has part: feature:3415875-3500476:1:exon
subclass of: SO_0000010

118594781
type: Gene
SIO_000068: ncbigene

position:3415875:1
position: 3415875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3500476:1
position: 3500476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3415875-3500476:1:exon

Ttc39c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ttc39c
product: tetratricopeptide repeat domain 39C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036204964.1
SIO_010081: Ttc39c
subclass of: SO_0000673
so part of: Ttc39c
location: join(3415875..3416604,3449280..3449328,3451141..3451269,3453250..3453364,3468344..3468698,3471615..3471783,3485272..3485365,3487312..3487419,3491906..3492015,3493083..3493206,3495205..3495302,3497527..3497631,3499132..3499170,3500117..3500476)
location: region:3415875-3500476:1
so has part: feature:3415875-3416604:1:exon
so has part: feature:3449280-3449328:1:exon
so has part: feature:3451141-3451269:1:exon
so has part: feature:3453250-3453364:1:exon
so has part: feature:3468344-3468698:1:exon
so has part: feature:3471615-3471783:1:exon
so has part: feature:3485272-3485365:1:exon
so has part: feature:3487312-3487419:1:exon
so has part: feature:3491906-3492015:1:exon
so has part: feature:3493083-3493206:1:exon
so has part: feature:3495205-3495302:1:exon
so has part: feature:3497527-3497631:1:exon
so has part: feature:3499132-3499170:1:exon
so has part: feature:3500117-3500476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3415875-3416604:1:exon

position:3416604:1
position: 3416604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3449280-3449328:1:exon

position:3449280:1
position: 3449280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3449328:1
position: 3449328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3451141-3451269:1:exon

position:3451141:1
position: 3451141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3451269:1
position: 3451269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3453250-3453364:1:exon

position:3453250:1
position: 3453250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3453364:1
position: 3453364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3468344-3468698:1:exon

position:3468344:1
position: 3468344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3468698:1
position: 3468698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3471615-3471783:1:exon

position:3471615:1
position: 3471615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3471783:1
position: 3471783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3485272-3485365:1:exon

position:3485272:1
position: 3485272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3485365:1
position: 3485365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3487312-3487419:1:exon

position:3487312:1
position: 3487312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3487419:1
position: 3487419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3491906-3492015:1:exon

position:3491906:1
position: 3491906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3492015:1
position: 3492015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3493083-3493206:1:exon

position:3493083:1
position: 3493083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3493206:1
position: 3493206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3495205-3495302:1:exon

position:3495205:1
position: 3495205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3495302:1
position: 3495302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3497527-3497631:1:exon

position:3497527:1
position: 3497527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3497631:1
position: 3497631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3499132-3499170:1:exon

position:3499132:1
position: 3499132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3499170:1
position: 3499170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3500117-3500476:1:exon

position:3500117:1
position: 3500117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ttc39c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ttc39c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 39C
translation: MAGSEQQRPRRRDESEPDAAAAAAAPAPLQDAELALAGINMLLNNGFRESDQLFKQYRNHSPLMSFGASFVSFLNAMMTFEEEKMQVACDDLKTTEKLCESEEAGVIETIKNKMKKNVDARKSAPSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYVDINALQELYQKKLTEEPLSSDAANDNHMVAEGVTEESLNRLKGAVSFGYGLFHLCISMVPPNLLKIINLLGFPGDRLQGLSSLTYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNQAGLDEAKEILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAIDQREIQHVCLYEIGWCSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQLVFKEVQKLFKRKNNQIEQFSVKKAERFRKQTPTRALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDPSVTGLKHLLLGAIHKCLGNSEDAVQFFQRAAKDELCRQNNLYVQPYACYELGCLLLGRPETVGRGRALLLQAKEDFSGYDFENRLHVRVHAALASLRELVPQ
SIO_010081: Ttc39c
subclass of: SO_0000673
so part of: Ttc39c
location: join(3416432..3416604,3449280..3449328,3451141..3451269,3453250..3453364,3468344..3468698,3471615..3471783,3485272..3485365,3487312..3487419,3491906..3492015,3493083..3493206,3495205..3495302,3497527..3497631,3499132..3499170,3500117..3500206)
location: region:3416432-3500206:1
so has part: feature:3416432-3416604:1:exon
so has part: feature:3449280-3449328:1:exon
so has part: feature:3451141-3451269:1:exon
so has part: feature:3453250-3453364:1:exon
so has part: feature:3468344-3468698:1:exon
so has part: feature:3471615-3471783:1:exon
so has part: feature:3485272-3485365:1:exon
so has part: feature:3487312-3487419:1:exon
so has part: feature:3491906-3492015:1:exon
so has part: feature:3493083-3493206:1:exon
so has part: feature:3495205-3495302:1:exon
so has part: feature:3497527-3497631:1:exon
so has part: feature:3499132-3499170:1:exon
so has part: feature:3500117-3500206:1:exon

XP_036060857.1
type: Protein
SIO_000068: ncbiprotein

position:3416432:1
position: 3416432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3500206:1
position: 3500206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3416432-3416604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3449280-3449328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3451141-3451269:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3453250-3453364:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3468344-3468698:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3471615-3471783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3485272-3485365:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3487312-3487419:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3491906-3492015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3493083-3493206:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3495205-3495302:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3497527-3497631:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3499132-3499170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3500117-3500206:1:exon

Cabyr
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Cabyr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3504931..3515169
location: region:3504931-3515169:1
so has part: feature:3504931-3515169:1:exon
subclass of: SO_0000010

118594414
type: Gene
SIO_000068: ncbigene

position:3504931:1
position: 3504931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3515169:1
position: 3515169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3504931-3515169:1:exon

Cabyr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Cabyr
product: calcium binding tyrosine phosphorylation regulated, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_036204254.1
SIO_010081: Cabyr
subclass of: SO_0000673
so part of: Cabyr
location: join(3504931..3504994,3507311..3507483,3507577..3507630,3510792..3511133,3513863..3515169)
location: region:3504931-3515169:1
so has part: feature:3504931-3504994:1:exon
so has part: feature:3507311-3507483:1:exon
so has part: feature:3507577-3507630:1:exon
so has part: feature:3510792-3511133:1:exon
so has part: feature:3513863-3515169:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3504931-3504994:1:exon

position:3504994:1
position: 3504994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3507311-3507483:1:exon

position:3507311:1
position: 3507311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3507483:1
position: 3507483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3507577-3507630:1:exon

position:3507577:1
position: 3507577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3507630:1
position: 3507630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3510792-3511133:1:exon

position:3510792:1
position: 3510792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3511133:1
position: 3511133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3513863-3515169:1:exon

position:3513863:1
position: 3513863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cabyr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Cabyr
product: calcium binding tyrosine phosphorylation regulated, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_036204255.1
SIO_010081: Cabyr
subclass of: SO_0000673
so part of: Cabyr
location: join(3504931..3504994,3507311..3507483,3507577..3507630,3510792..3511133,3513863..3514466,3515093..3515169)
location: region:3504931-3515169:1
so has part: feature:3504931-3504994:1:exon
so has part: feature:3507311-3507483:1:exon
so has part: feature:3507577-3507630:1:exon
so has part: feature:3510792-3511133:1:exon
so has part: feature:3513863-3514466:1:exon
so has part: feature:3515093-3515169:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3504931-3504994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3507311-3507483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3507577-3507630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3510792-3511133:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3513863-3514466:1:exon

position:3514466:1
position: 3514466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3515093-3515169:1:exon

position:3515093:1
position: 3515093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cabyr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Cabyr
product: calcium binding tyrosine phosphorylation regulated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_036204252.1
SIO_010081: Cabyr
subclass of: SO_0000673
so part of: Cabyr
location: join(3504931..3504994,3507311..3507483,3507577..3507630,3510792..3511963,3513863..3513922)
location: region:3504931-3513922:1
so has part: feature:3504931-3504994:1:exon
so has part: feature:3507311-3507483:1:exon
so has part: feature:3507577-3507630:1:exon
so has part: feature:3510792-3511963:1:exon
so has part: feature:3513863-3513922:1:exon

position:3513922:1
position: 3513922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3504931-3504994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3507311-3507483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3507577-3507630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3510792-3511963:1:exon

position:3511963:1
position: 3511963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3513863-3513922:1:exon

Cabyr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Cabyr
product: calcium binding tyrosine phosphorylation regulated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036204253.1
SIO_010081: Cabyr
subclass of: SO_0000673
so part of: Cabyr
location: join(3504954..3504994,3505580..3505643,3507311..3507483,3507577..3507630,3510792..3511963,3513863..3513922)
location: region:3504954-3513922:1
so has part: feature:3504954-3504994:1:exon
so has part: feature:3505580-3505643:1:exon
so has part: feature:3507311-3507483:1:exon
so has part: feature:3507577-3507630:1:exon
so has part: feature:3510792-3511963:1:exon
so has part: feature:3513863-3513922:1:exon

position:3504954:1
position: 3504954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3504954-3504994:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3505580-3505643:1:exon

position:3505580:1
position: 3505580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3505643:1
position: 3505643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3507311-3507483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3507577-3507630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3510792-3511963:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3513863-3513922:1:exon

Cabyr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Cabyr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding tyrosine phosphorylation-regulated protein isoform X2
translation: MISSKPRLVVPYGLKTLLEGVSRAILKTNPTNITQFAAVYFKELIVFREGNSSLDIKDLIKQFHQTKVEKWAEGATLEKKECVKESGRTPPVSCEPARLEKSTDTEEDNVAGPLFSNKTTQFPSVHAELQPEETCEGVWGPSSKPTTPKTTTPPTSPPPAPVSAEYAYVPADPAQFAAQMLALATSEAGQPPPYSNMWTLYCLTDMNQQSRPSPPPALGPFPQATLYLPNPKDPPQFLQNPPKVTSPTYVMMDDSKKTSAPPFILVGSNVQEAQDWKPLPGHTVVSQSEALKRYAAVQVPIAVPADQTFQRPAPNPQNASPPTSGQDGPRPKSPVFLSVAFPVEDVAKKSSGSGDKRTPFGSYGIAGEITVTTAHVRRAEP
SIO_010081: Cabyr
subclass of: SO_0000673
so part of: Cabyr
location: join(3507336..3507483,3507577..3507630,3510792..3511133,3513863..3514464)
location: region:3507336-3514464:1
so has part: feature:3507336-3507483:1:exon
so has part: feature:3507577-3507630:1:exon
so has part: feature:3510792-3511133:1:exon
so has part: feature:3513863-3514464:1:exon

XP_036060147.1
type: Protein
SIO_000068: ncbiprotein

position:3507336:1
position: 3507336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3514464:1
position: 3514464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3507336-3507483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3507577-3507630:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3510792-3511133:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3513863-3514464:1:exon

Cabyr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Cabyr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding tyrosine phosphorylation-regulated protein isoform X2
translation: MISSKPRLVVPYGLKTLLEGVSRAILKTNPTNITQFAAVYFKELIVFREGNSSLDIKDLIKQFHQTKVEKWAEGATLEKKECVKESGRTPPVSCEPARLEKSTDTEEDNVAGPLFSNKTTQFPSVHAELQPEETCEGVWGPSSKPTTPKTTTPPTSPPPAPVSAEYAYVPADPAQFAAQMLALATSEAGQPPPYSNMWTLYCLTDMNQQSRPSPPPALGPFPQATLYLPNPKDPPQFLQNPPKVTSPTYVMMDDSKKTSAPPFILVGSNVQEAQDWKPLPGHTVVSQSEALKRYAAVQVPIAVPADQTFQRPAPNPQNASPPTSGQDGPRPKSPVFLSVAFPVEDVAKKSSGSGDKRTPFGSYGIAGEITVTTAHVRRAEP
SIO_010081: Cabyr
subclass of: SO_0000673
so part of: Cabyr
location: join(3507336..3507483,3507577..3507630,3510792..3511133,3513863..3514464)
location: region:3507336-3514464:1
so has part: feature:3507336-3507483:1:exon
so has part: feature:3507577-3507630:1:exon
so has part: feature:3510792-3511133:1:exon
so has part: feature:3513863-3514464:1:exon

XP_036060148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3507336-3507483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3507577-3507630:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3510792-3511133:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3513863-3514464:1:exon

Cabyr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Cabyr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding tyrosine phosphorylation-regulated protein isoform X1
translation: MISSKPRLVVPYGLKTLLEGVSRAILKTNPTNITQFAAVYFKELIVFREGNSSLDIKDLIKQFHQTKVEKWAEGATLEKKECVKESGRTPPVSCEPARLEKSTDTEEDNVAGPLFSNKTTQFPSVHAELQPEETCEGVWGPSSKPTTPKTTTPPTSPPPAPVSAEYAYVPADPAQFAAQMLGNVSSTHSEVLMVDVATSTPSVFQDALSSEFAEEVVVSAPLVCSGEMVAVRVMSQTSAQAVVGPKSKAEPSKASSAPLQGEQEPPAYEAPDTQATSPFHVPSVCNDVPVNEGVVYVEQIPGFIVIPFNDQVACSKENEQSPPVSHKAVEPKTSSGVSKLSVESLRIVQVENSQHQSSVHMEAEATVLLSNTALDGQPKVPAEPLDAEGFVQIASEKSLHLEMEIVTIDPDNPGQEESGENSAPYSSGDPFPPAPGGFTEPEIQPDGEDAPEQV
SIO_010081: Cabyr
subclass of: SO_0000673
so part of: Cabyr
location: join(3507336..3507483,3507577..3507630,3510792..3511954)
location: region:3507336-3511954:1
so has part: feature:3507336-3507483:1:exon
so has part: feature:3507577-3507630:1:exon
so has part: feature:3510792-3511954:1:exon

XP_036060145.1
type: Protein
SIO_000068: ncbiprotein

position:3511954:1
position: 3511954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3507336-3507483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3507577-3507630:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3510792-3511954:1:exon

Cabyr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Cabyr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding tyrosine phosphorylation-regulated protein isoform X1
translation: MISSKPRLVVPYGLKTLLEGVSRAILKTNPTNITQFAAVYFKELIVFREGNSSLDIKDLIKQFHQTKVEKWAEGATLEKKECVKESGRTPPVSCEPARLEKSTDTEEDNVAGPLFSNKTTQFPSVHAELQPEETCEGVWGPSSKPTTPKTTTPPTSPPPAPVSAEYAYVPADPAQFAAQMLGNVSSTHSEVLMVDVATSTPSVFQDALSSEFAEEVVVSAPLVCSGEMVAVRVMSQTSAQAVVGPKSKAEPSKASSAPLQGEQEPPAYEAPDTQATSPFHVPSVCNDVPVNEGVVYVEQIPGFIVIPFNDQVACSKENEQSPPVSHKAVEPKTSSGVSKLSVESLRIVQVENSQHQSSVHMEAEATVLLSNTALDGQPKVPAEPLDAEGFVQIASEKSLHLEMEIVTIDPDNPGQEESGENSAPYSSGDPFPPAPGGFTEPEIQPDGEDAPEQV
SIO_010081: Cabyr
subclass of: SO_0000673
so part of: Cabyr
location: join(3507336..3507483,3507577..3507630,3510792..3511954)
location: region:3507336-3511954:1
so has part: feature:3507336-3507483:1:exon
so has part: feature:3507577-3507630:1:exon
so has part: feature:3510792-3511954:1:exon

XP_036060146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3507336-3507483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3507577-3507630:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3510792-3511954:1:exon

Osbpl1a
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Osbpl1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3516270..3703591)
location: region:3516270-3703591:-1
so has part: feature:3516270-3703591:-1:exon
subclass of: SO_0000010

118594413
type: Gene
SIO_000068: ncbigene

position:3516270:-1
position: 3516270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3703591:-1
position: 3703591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3516270-3703591:-1:exon

Osbpl1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Osbpl1a
product: oxysterol binding protein like 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 24 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036204247.1
SIO_010081: Osbpl1a
subclass of: SO_0000673
so part of: Osbpl1a
location: complement(join(3516270..3516388,3518178..3518268,3519421..3519544,3520029..3520145,3523005..3523131,3523343..3523432,3523860..3523967,3527215..3527397,3529634..3529731,3531571..3531705,3546594..3546669,3579312..3579468,3600969..3601131,3627383..3627489,3637704..3637785,3644329..3644451,3652411..3652509,3658809..3658872,3658980..3659053,3661041..3661085,3661190..3661251,3664122..3664266,3665758..3665843,3672056..3672167,3689961..3690035,3690759..3690844,3695089..3695211,3703383..3703591))
location: region:3516270-3703591:-1
so has part: feature:3703383-3703591:-1:exon
so has part: feature:3695089-3695211:-1:exon
so has part: feature:3690759-3690844:-1:exon
so has part: feature:3689961-3690035:-1:exon
so has part: feature:3672056-3672167:-1:exon
so has part: feature:3665758-3665843:-1:exon
so has part: feature:3664122-3664266:-1:exon
so has part: feature:3661190-3661251:-1:exon
so has part: feature:3661041-3661085:-1:exon
so has part: feature:3658980-3659053:-1:exon
so has part: feature:3658809-3658872:-1:exon
so has part: feature:3652411-3652509:-1:exon
so has part: feature:3644329-3644451:-1:exon
so has part: feature:3637704-3637785:-1:exon
so has part: feature:3627383-3627489:-1:exon
so has part: feature:3600969-3601131:-1:exon
so has part: feature:3579312-3579468:-1:exon
so has part: feature:3546594-3546669:-1:exon
so has part: feature:3531571-3531705:-1:exon
so has part: feature:3529634-3529731:-1:exon
so has part: feature:3527215-3527397:-1:exon
so has part: feature:3523860-3523967:-1:exon
so has part: feature:3523343-3523432:-1:exon
so has part: feature:3523005-3523131:-1:exon
so has part: feature:3520029-3520145:-1:exon
so has part: feature:3519421-3519544:-1:exon
so has part: feature:3518178-3518268:-1:exon
so has part: feature:3516270-3516388:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3703383-3703591:-1:exon

position:3703383:-1
position: 3703383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3695089-3695211:-1:exon

position:3695089:-1
position: 3695089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3695211:-1
position: 3695211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3690759-3690844:-1:exon

position:3690759:-1
position: 3690759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3690844:-1
position: 3690844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3689961-3690035:-1:exon

position:3689961:-1
position: 3689961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3690035:-1
position: 3690035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3672056-3672167:-1:exon

position:3672056:-1
position: 3672056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3672167:-1
position: 3672167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3665758-3665843:-1:exon

position:3665758:-1
position: 3665758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3665843:-1
position: 3665843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3664122-3664266:-1:exon

position:3664122:-1
position: 3664122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3664266:-1
position: 3664266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3661190-3661251:-1:exon

position:3661190:-1
position: 3661190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3661251:-1
position: 3661251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3661041-3661085:-1:exon

position:3661041:-1
position: 3661041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3661085:-1
position: 3661085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3658980-3659053:-1:exon

position:3658980:-1
position: 3658980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3659053:-1
position: 3659053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3658809-3658872:-1:exon

position:3658809:-1
position: 3658809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3658872:-1
position: 3658872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3652411-3652509:-1:exon

position:3652411:-1
position: 3652411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3652509:-1
position: 3652509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3644329-3644451:-1:exon

position:3644329:-1
position: 3644329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3644451:-1
position: 3644451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3637704-3637785:-1:exon

position:3637704:-1
position: 3637704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3637785:-1
position: 3637785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3627383-3627489:-1:exon

position:3627383:-1
position: 3627383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3627489:-1
position: 3627489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3600969-3601131:-1:exon

position:3600969:-1
position: 3600969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3601131:-1
position: 3601131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3579312-3579468:-1:exon

position:3579312:-1
position: 3579312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3579468:-1
position: 3579468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3546594-3546669:-1:exon

position:3546594:-1
position: 3546594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3546669:-1
position: 3546669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3531571-3531705:-1:exon

position:3531571:-1
position: 3531571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3531705:-1
position: 3531705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3529634-3529731:-1:exon

position:3529634:-1
position: 3529634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3529731:-1
position: 3529731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3527215-3527397:-1:exon

position:3527215:-1
position: 3527215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3527397:-1
position: 3527397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3523860-3523967:-1:exon

position:3523860:-1
position: 3523860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3523967:-1
position: 3523967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3523343-3523432:-1:exon

position:3523343:-1
position: 3523343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3523432:-1
position: 3523432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3523005-3523131:-1:exon

position:3523005:-1
position: 3523005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3523131:-1
position: 3523131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3520029-3520145:-1:exon

position:3520029:-1
position: 3520029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3520145:-1
position: 3520145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3519421-3519544:-1:exon

position:3519421:-1
position: 3519421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3519544:-1
position: 3519544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3518178-3518268:-1:exon

position:3518178:-1
position: 3518178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3518268:-1
position: 3518268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3516270-3516388:-1:exon

position:3516388:-1
position: 3516388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Osbpl1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Osbpl1a
product: oxysterol binding protein like 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036204246.1
SIO_010081: Osbpl1a
subclass of: SO_0000673
so part of: Osbpl1a
location: complement(join(3516270..3516388,3518178..3518268,3519421..3519544,3520029..3520145,3523005..3523131,3523343..3523432,3523860..3523967,3527215..3527397,3529634..3529731,3531571..3531705,3546594..3546669,3579312..3579468,3600969..3601131,3627383..3627489,3637704..3637785,3644329..3644451,3652411..3652509,3658809..3658872,3658980..3659053,3661041..3661088,3661190..3661251,3664122..3664266,3665758..3665843,3672056..3672167,3689961..3690035,3690759..3690844,3695089..3695211,3703383..3703577))
location: region:3516270-3703577:-1
so has part: feature:3703383-3703577:-1:exon
so has part: feature:3695089-3695211:-1:exon
so has part: feature:3690759-3690844:-1:exon
so has part: feature:3689961-3690035:-1:exon
so has part: feature:3672056-3672167:-1:exon
so has part: feature:3665758-3665843:-1:exon
so has part: feature:3664122-3664266:-1:exon
so has part: feature:3661190-3661251:-1:exon
so has part: feature:3661041-3661088:-1:exon
so has part: feature:3658980-3659053:-1:exon
so has part: feature:3658809-3658872:-1:exon
so has part: feature:3652411-3652509:-1:exon
so has part: feature:3644329-3644451:-1:exon
so has part: feature:3637704-3637785:-1:exon
so has part: feature:3627383-3627489:-1:exon
so has part: feature:3600969-3601131:-1:exon
so has part: feature:3579312-3579468:-1:exon
so has part: feature:3546594-3546669:-1:exon
so has part: feature:3531571-3531705:-1:exon
so has part: feature:3529634-3529731:-1:exon
so has part: feature:3527215-3527397:-1:exon
so has part: feature:3523860-3523967:-1:exon
so has part: feature:3523343-3523432:-1:exon
so has part: feature:3523005-3523131:-1:exon
so has part: feature:3520029-3520145:-1:exon
so has part: feature:3519421-3519544:-1:exon
so has part: feature:3518178-3518268:-1:exon
so has part: feature:3516270-3516388:-1:exon

position:3703577:-1
position: 3703577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3703383-3703577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3695089-3695211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3690759-3690844:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3689961-3690035:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3672056-3672167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3665758-3665843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3664122-3664266:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3661190-3661251:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3661041-3661088:-1:exon

position:3661088:-1
position: 3661088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3658980-3659053:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3658809-3658872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3652411-3652509:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3644329-3644451:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3637704-3637785:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3627383-3627489:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3600969-3601131:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3579312-3579468:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3546594-3546669:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3531571-3531705:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3529634-3529731:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3527215-3527397:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3523860-3523967:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3523343-3523432:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3523005-3523131:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3520029-3520145:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3519421-3519544:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3518178-3518268:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3516270-3516388:-1:exon

Osbpl1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Osbpl1a
product: oxysterol binding protein like 1A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_036204248.1
SIO_010081: Osbpl1a
subclass of: SO_0000673
so part of: Osbpl1a
location: complement(join(3516270..3516388,3518178..3518268,3519421..3519544,3520029..3520145,3523005..3523131,3523343..3523432,3523860..3523967,3527215..3527397,3529634..3529731,3531571..3531705,3546594..3546669,3579312..3579468,3600969..3601131,3627383..3627489,3637704..3637785,3644329..3644451,3658809..3658872,3658980..3659053,3661041..3661088,3661190..3661251,3664122..3664266,3665758..3665843,3672056..3672167,3689961..3690035,3690759..3690844,3695089..3695211,3703383..3703576))
location: region:3516270-3703576:-1
so has part: feature:3703383-3703576:-1:exon
so has part: feature:3695089-3695211:-1:exon
so has part: feature:3690759-3690844:-1:exon
so has part: feature:3689961-3690035:-1:exon
so has part: feature:3672056-3672167:-1:exon
so has part: feature:3665758-3665843:-1:exon
so has part: feature:3664122-3664266:-1:exon
so has part: feature:3661190-3661251:-1:exon
so has part: feature:3661041-3661088:-1:exon
so has part: feature:3658980-3659053:-1:exon
so has part: feature:3658809-3658872:-1:exon
so has part: feature:3644329-3644451:-1:exon
so has part: feature:3637704-3637785:-1:exon
so has part: feature:3627383-3627489:-1:exon
so has part: feature:3600969-3601131:-1:exon
so has part: feature:3579312-3579468:-1:exon
so has part: feature:3546594-3546669:-1:exon
so has part: feature:3531571-3531705:-1:exon
so has part: feature:3529634-3529731:-1:exon
so has part: feature:3527215-3527397:-1:exon
so has part: feature:3523860-3523967:-1:exon
so has part: feature:3523343-3523432:-1:exon
so has part: feature:3523005-3523131:-1:exon
so has part: feature:3520029-3520145:-1:exon
so has part: feature:3519421-3519544:-1:exon
so has part: feature:3518178-3518268:-1:exon
so has part: feature:3516270-3516388:-1:exon

position:3703576:-1
position: 3703576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3703383-3703576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3695089-3695211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3690759-3690844:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3689961-3690035:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3672056-3672167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3665758-3665843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3664122-3664266:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3661190-3661251:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3661041-3661088:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3658980-3659053:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3658809-3658872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3644329-3644451:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3637704-3637785:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3627383-3627489:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3600969-3601131:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3579312-3579468:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3546594-3546669:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3531571-3531705:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3529634-3529731:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3527215-3527397:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3523860-3523967:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3523343-3523432:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3523005-3523131:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3520029-3520145:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3519421-3519544:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3518178-3518268:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3516270-3516388:-1:exon

Osbpl1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Osbpl1a
product: oxysterol binding protein like 1A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036204250.1
SIO_010081: Osbpl1a
subclass of: SO_0000673
so part of: Osbpl1a
location: complement(join(3516270..3516388,3518178..3518268,3519421..3519544,3520029..3520145,3523005..3523131,3523343..3523432,3523860..3523967,3527215..3527397,3529634..3529731,3531571..3531705,3546594..3546669,3579312..3579468,3600969..3601131,3618727..3619336))
location: region:3516270-3619336:-1
so has part: feature:3618727-3619336:-1:exon
so has part: feature:3600969-3601131:-1:exon
so has part: feature:3579312-3579468:-1:exon
so has part: feature:3546594-3546669:-1:exon
so has part: feature:3531571-3531705:-1:exon
so has part: feature:3529634-3529731:-1:exon
so has part: feature:3527215-3527397:-1:exon
so has part: feature:3523860-3523967:-1:exon
so has part: feature:3523343-3523432:-1:exon
so has part: feature:3523005-3523131:-1:exon
so has part: feature:3520029-3520145:-1:exon
so has part: feature:3519421-3519544:-1:exon
so has part: feature:3518178-3518268:-1:exon
so has part: feature:3516270-3516388:-1:exon

position:3619336:-1
position: 3619336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3618727-3619336:-1:exon

position:3618727:-1
position: 3618727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3600969-3601131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3579312-3579468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3546594-3546669:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3531571-3531705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3529634-3529731:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3527215-3527397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3523860-3523967:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3523343-3523432:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3523005-3523131:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3520029-3520145:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3519421-3519544:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3518178-3518268:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3516270-3516388:-1:exon

Osbpl1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Osbpl1a
product: oxysterol binding protein like 1A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_036204251.1
SIO_010081: Osbpl1a
subclass of: SO_0000673
so part of: Osbpl1a
location: complement(join(3516270..3516388,3518178..3518268,3519421..3519544,3520029..3520145,3523005..3523131,3523343..3523432,3523860..3523967,3527215..3527397,3529634..3529731,3531571..3531705,3546594..3546669,3579312..3579468,3600969..3601131,3619051..3619168))
location: region:3516270-3619168:-1
so has part: feature:3619051-3619168:-1:exon
so has part: feature:3600969-3601131:-1:exon
so has part: feature:3579312-3579468:-1:exon
so has part: feature:3546594-3546669:-1:exon
so has part: feature:3531571-3531705:-1:exon
so has part: feature:3529634-3529731:-1:exon
so has part: feature:3527215-3527397:-1:exon
so has part: feature:3523860-3523967:-1:exon
so has part: feature:3523343-3523432:-1:exon
so has part: feature:3523005-3523131:-1:exon
so has part: feature:3520029-3520145:-1:exon
so has part: feature:3519421-3519544:-1:exon
so has part: feature:3518178-3518268:-1:exon
so has part: feature:3516270-3516388:-1:exon

position:3619168:-1
position: 3619168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3619051-3619168:-1:exon

position:3619051:-1
position: 3619051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3600969-3601131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3579312-3579468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3546594-3546669:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3531571-3531705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3529634-3529731:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3527215-3527397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3523860-3523967:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3523343-3523432:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3523005-3523131:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3520029-3520145:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3519421-3519544:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3518178-3518268:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3516270-3516388:-1:exon

Osbpl1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Osbpl1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 1 isoform X2
translation: MNTEAEQQLLHHARNGNTEEVRKLLEAMERTEVIAAIDCKGRSKSNLGWTPLHLACYFGHKQVVQDLLKAGAKVNVLNDMGDTPLHRAAFTGRKELVMLLLEYNADTTVVNGSGQTAKEATHDKEIRNMLEAVERTQQRKLEELLLGAAREGRTAQVSALLSRPSPPDVNCSDQLGNTPLHCAAYRAHKQCALKLLRSGADPNLKNKNDQKPLDLAHGAEMKHILVGSKVLYKALKRYEGPLWKSSRFFGWKLFWVVLEHGVLSWYRKQPDAVRNTYRQGCKHLTQAVCTVKPTDSCLFSIRCFDDTVHGFRVPKNSLQQSREKWLEAIEEHSAYSTHYCSQDQVTDEEEEEEVSPMDLKESLERAQTCQQRLDREIYNFLKMIKECDVAKDMLPSFLQKAEVVSEASRETCVALSDCLNLFTKQEGVRSFKLEQEQEKNKILSEALETLATEHHELERSLVEGSPPVSILSEDEFYDALSGSESEASLTCLEAVTAHSFEENEVPVSSGRHRMSEGKDCGGGDALSNGIKRHRTSLPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSFSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGSVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQTSSSEESDEMPVPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKEMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPHNGAQDWIYSGSYWDRNYFNLPDIY
SIO_010081: Osbpl1a
subclass of: SO_0000673
so part of: Osbpl1a
location: complement(join(3516286..3516388,3518178..3518268,3519421..3519544,3520029..3520145,3523005..3523131,3523343..3523432,3523860..3523967,3527215..3527397,3529634..3529731,3531571..3531705,3546594..3546669,3579312..3579468,3600969..3601131,3627383..3627489,3637704..3637785,3644329..3644451,3652411..3652509,3658809..3658872,3658980..3659053,3661041..3661085,3661190..3661251,3664122..3664266,3665758..3665843,3672056..3672167,3689961..3690035,3690759..3690844,3695089..3695209))
location: region:3516286-3695209:-1
so has part: feature:3695089-3695209:-1:exon
so has part: feature:3690759-3690844:-1:exon
so has part: feature:3689961-3690035:-1:exon
so has part: feature:3672056-3672167:-1:exon
so has part: feature:3665758-3665843:-1:exon
so has part: feature:3664122-3664266:-1:exon
so has part: feature:3661190-3661251:-1:exon
so has part: feature:3661041-3661085:-1:exon
so has part: feature:3658980-3659053:-1:exon
so has part: feature:3658809-3658872:-1:exon
so has part: feature:3652411-3652509:-1:exon
so has part: feature:3644329-3644451:-1:exon
so has part: feature:3637704-3637785:-1:exon
so has part: feature:3627383-3627489:-1:exon
so has part: feature:3600969-3601131:-1:exon
so has part: feature:3579312-3579468:-1:exon
so has part: feature:3546594-3546669:-1:exon
so has part: feature:3531571-3531705:-1:exon
so has part: feature:3529634-3529731:-1:exon
so has part: feature:3527215-3527397:-1:exon
so has part: feature:3523860-3523967:-1:exon
so has part: feature:3523343-3523432:-1:exon
so has part: feature:3523005-3523131:-1:exon
so has part: feature:3520029-3520145:-1:exon
so has part: feature:3519421-3519544:-1:exon
so has part: feature:3518178-3518268:-1:exon
so has part: feature:3516286-3516388:-1:exon

XP_036060140.1
type: Protein
SIO_000068: ncbiprotein

position:3516286:-1
position: 3516286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3695209:-1
position: 3695209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3695089-3695209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3690759-3690844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3689961-3690035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3672056-3672167:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3665758-3665843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3664122-3664266:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3661190-3661251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3661041-3661085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3658980-3659053:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3658809-3658872:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3652411-3652509:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3644329-3644451:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3637704-3637785:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3627383-3627489:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3600969-3601131:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3579312-3579468:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3546594-3546669:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3531571-3531705:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3529634-3529731:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3527215-3527397:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3523860-3523967:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3523343-3523432:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3523005-3523131:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3520029-3520145:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3519421-3519544:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3518178-3518268:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3516286-3516388:-1:exon

Osbpl1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Osbpl1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 1 isoform X3
translation: MNTEAEQQLLHHARNGNTEEVRKLLEAMERTEVIAAIDCKGRSKSNLGWTPLHLACYFGHKQVVQDLLKAGAKVNVLNDMGDTPLHRAAFTGRKELVMLLLEYNADTTVVNGSGQTAKEATHDKEIRNMLEAVERTQQRKLEELLLGAAREGRTAQVSALLSRPSPPDVNCSDQLGNTPLHCAAYRAHKQCALKLLRSGADPNLKNKNDQKPLDLAHGAEMKHILVGSKQVLYKALKRYEGPLWKSSRFFGWKLFWVVLEHGVLSWYRKQPDAVRNTYRQGCKHLTQAVCTKWLEAIEEHSAYSTHYCSQDQVTDEEEEEEVSPMDLKESLERAQTCQQRLDREIYNFLKMIKECDVAKDMLPSFLQKAEVVSEASRETCVALSDCLNLFTKQEGVRSFKLEQEQEKNKILSEALETLATEHHELERSLVEGSPPVSILSEDEFYDALSGSESEASLTCLEAVTAHSFEENEVPVSSGRHRMSEGKDCGGGDALSNGIKRHRTSLPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSFSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGSVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQTSSSEESDEMPVPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKEMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPHNGAQDWIYSGSYWDRNYFNLPDIY
SIO_010081: Osbpl1a
subclass of: SO_0000673
so part of: Osbpl1a
location: complement(join(3516286..3516388,3518178..3518268,3519421..3519544,3520029..3520145,3523005..3523131,3523343..3523432,3523860..3523967,3527215..3527397,3529634..3529731,3531571..3531705,3546594..3546669,3579312..3579468,3600969..3601131,3627383..3627489,3637704..3637785,3644329..3644451,3658809..3658872,3658980..3659053,3661041..3661088,3661190..3661251,3664122..3664266,3665758..3665843,3672056..3672167,3689961..3690035,3690759..3690844,3695089..3695209))
location: region:3516286-3695209:-1
so has part: feature:3695089-3695209:-1:exon
so has part: feature:3690759-3690844:-1:exon
so has part: feature:3689961-3690035:-1:exon
so has part: feature:3672056-3672167:-1:exon
so has part: feature:3665758-3665843:-1:exon
so has part: feature:3664122-3664266:-1:exon
so has part: feature:3661190-3661251:-1:exon
so has part: feature:3661041-3661088:-1:exon
so has part: feature:3658980-3659053:-1:exon
so has part: feature:3658809-3658872:-1:exon
so has part: feature:3644329-3644451:-1:exon
so has part: feature:3637704-3637785:-1:exon
so has part: feature:3627383-3627489:-1:exon
so has part: feature:3600969-3601131:-1:exon
so has part: feature:3579312-3579468:-1:exon
so has part: feature:3546594-3546669:-1:exon
so has part: feature:3531571-3531705:-1:exon
so has part: feature:3529634-3529731:-1:exon
so has part: feature:3527215-3527397:-1:exon
so has part: feature:3523860-3523967:-1:exon
so has part: feature:3523343-3523432:-1:exon
so has part: feature:3523005-3523131:-1:exon
so has part: feature:3520029-3520145:-1:exon
so has part: feature:3519421-3519544:-1:exon
so has part: feature:3518178-3518268:-1:exon
so has part: feature:3516286-3516388:-1:exon

XP_036060141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3695089-3695209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3690759-3690844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3689961-3690035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3672056-3672167:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3665758-3665843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3664122-3664266:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3661190-3661251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3661041-3661088:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3658980-3659053:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3658809-3658872:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3644329-3644451:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3637704-3637785:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3627383-3627489:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3600969-3601131:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3579312-3579468:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3546594-3546669:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3531571-3531705:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3529634-3529731:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3527215-3527397:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3523860-3523967:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3523343-3523432:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3523005-3523131:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3520029-3520145:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3519421-3519544:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3518178-3518268:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3516286-3516388:-1:exon

Osbpl1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Osbpl1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 1 isoform X1
translation: MNTEAEQQLLHHARNGNTEEVRKLLEAMERTEVIAAIDCKGRSKSNLGWTPLHLACYFGHKQVVQDLLKAGAKVNVLNDMGDTPLHRAAFTGRKELVMLLLEYNADTTVVNGSGQTAKEATHDKEIRNMLEAVERTQQRKLEELLLGAAREGRTAQVSALLSRPSPPDVNCSDQLGNTPLHCAAYRAHKQCALKLLRSGADPNLKNKNDQKPLDLAHGAEMKHILVGSKQVLYKALKRYEGPLWKSSRFFGWKLFWVVLEHGVLSWYRKQPDAVRNTYRQGCKHLTQAVCTVKPTDSCLFSIRCFDDTVHGFRVPKNSLQQSREKWLEAIEEHSAYSTHYCSQDQVTDEEEEEEVSPMDLKESLERAQTCQQRLDREIYNFLKMIKECDVAKDMLPSFLQKAEVVSEASRETCVALSDCLNLFTKQEGVRSFKLEQEQEKNKILSEALETLATEHHELERSLVEGSPPVSILSEDEFYDALSGSESEASLTCLEAVTAHSFEENEVPVSSGRHRMSEGKDCGGGDALSNGIKRHRTSLPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSFSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGSVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQTSSSEESDEMPVPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKEMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPHNGAQDWIYSGSYWDRNYFNLPDIY
SIO_010081: Osbpl1a
subclass of: SO_0000673
so part of: Osbpl1a
location: complement(join(3516286..3516388,3518178..3518268,3519421..3519544,3520029..3520145,3523005..3523131,3523343..3523432,3523860..3523967,3527215..3527397,3529634..3529731,3531571..3531705,3546594..3546669,3579312..3579468,3600969..3601131,3627383..3627489,3637704..3637785,3644329..3644451,3652411..3652509,3658809..3658872,3658980..3659053,3661041..3661088,3661190..3661251,3664122..3664266,3665758..3665843,3672056..3672167,3689961..3690035,3690759..3690844,3695089..3695209))
location: region:3516286-3695209:-1
so has part: feature:3695089-3695209:-1:exon
so has part: feature:3690759-3690844:-1:exon
so has part: feature:3689961-3690035:-1:exon
so has part: feature:3672056-3672167:-1:exon
so has part: feature:3665758-3665843:-1:exon
so has part: feature:3664122-3664266:-1:exon
so has part: feature:3661190-3661251:-1:exon
so has part: feature:3661041-3661088:-1:exon
so has part: feature:3658980-3659053:-1:exon
so has part: feature:3658809-3658872:-1:exon
so has part: feature:3652411-3652509:-1:exon
so has part: feature:3644329-3644451:-1:exon
so has part: feature:3637704-3637785:-1:exon
so has part: feature:3627383-3627489:-1:exon
so has part: feature:3600969-3601131:-1:exon
so has part: feature:3579312-3579468:-1:exon
so has part: feature:3546594-3546669:-1:exon
so has part: feature:3531571-3531705:-1:exon
so has part: feature:3529634-3529731:-1:exon
so has part: feature:3527215-3527397:-1:exon
so has part: feature:3523860-3523967:-1:exon
so has part: feature:3523343-3523432:-1:exon
so has part: feature:3523005-3523131:-1:exon
so has part: feature:3520029-3520145:-1:exon
so has part: feature:3519421-3519544:-1:exon
so has part: feature:3518178-3518268:-1:exon
so has part: feature:3516286-3516388:-1:exon

XP_036060139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3695089-3695209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3690759-3690844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3689961-3690035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3672056-3672167:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3665758-3665843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3664122-3664266:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3661190-3661251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3661041-3661088:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3658980-3659053:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3658809-3658872:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3652411-3652509:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3644329-3644451:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3637704-3637785:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3627383-3627489:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3600969-3601131:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3579312-3579468:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3546594-3546669:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3531571-3531705:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3529634-3529731:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3527215-3527397:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3523860-3523967:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3523343-3523432:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3523005-3523131:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3520029-3520145:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3519421-3519544:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3518178-3518268:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3516286-3516388:-1:exon

Osbpl1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Osbpl1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 1 isoform X4
translation: MSEGKDCGGGDALSNGIKRHRTSLPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSFSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGSVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQTSSSEESDEMPVPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKEMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPHNGAQDWIYSGSYWDRNYFNLPDIY
SIO_010081: Osbpl1a
subclass of: SO_0000673
so part of: Osbpl1a
location: complement(join(3516286..3516388,3518178..3518268,3519421..3519544,3520029..3520145,3523005..3523131,3523343..3523432,3523860..3523967,3527215..3527397,3529634..3529731,3531571..3531705,3546594..3546669,3579312..3579373))
location: region:3516286-3579373:-1
so has part: feature:3579312-3579373:-1:exon
so has part: feature:3546594-3546669:-1:exon
so has part: feature:3531571-3531705:-1:exon
so has part: feature:3529634-3529731:-1:exon
so has part: feature:3527215-3527397:-1:exon
so has part: feature:3523860-3523967:-1:exon
so has part: feature:3523343-3523432:-1:exon
so has part: feature:3523005-3523131:-1:exon
so has part: feature:3520029-3520145:-1:exon
so has part: feature:3519421-3519544:-1:exon
so has part: feature:3518178-3518268:-1:exon
so has part: feature:3516286-3516388:-1:exon

XP_036060143.1
type: Protein
SIO_000068: ncbiprotein

position:3579373:-1
position: 3579373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3579312-3579373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3546594-3546669:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3531571-3531705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3529634-3529731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3527215-3527397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3523860-3523967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3523343-3523432:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3523005-3523131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3520029-3520145:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3519421-3519544:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3518178-3518268:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3516286-3516388:-1:exon

Osbpl1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Osbpl1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 1 isoform X4
translation: MSEGKDCGGGDALSNGIKRHRTSLPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSFSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGSVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQTSSSEESDEMPVPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKEMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPHNGAQDWIYSGSYWDRNYFNLPDIY
SIO_010081: Osbpl1a
subclass of: SO_0000673
so part of: Osbpl1a
location: complement(join(3516286..3516388,3518178..3518268,3519421..3519544,3520029..3520145,3523005..3523131,3523343..3523432,3523860..3523967,3527215..3527397,3529634..3529731,3531571..3531705,3546594..3546669,3579312..3579373))
location: region:3516286-3579373:-1
so has part: feature:3579312-3579373:-1:exon
so has part: feature:3546594-3546669:-1:exon
so has part: feature:3531571-3531705:-1:exon
so has part: feature:3529634-3529731:-1:exon
so has part: feature:3527215-3527397:-1:exon
so has part: feature:3523860-3523967:-1:exon
so has part: feature:3523343-3523432:-1:exon
so has part: feature:3523005-3523131:-1:exon
so has part: feature:3520029-3520145:-1:exon
so has part: feature:3519421-3519544:-1:exon
so has part: feature:3518178-3518268:-1:exon
so has part: feature:3516286-3516388:-1:exon

XP_036060144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3579312-3579373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3546594-3546669:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3531571-3531705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3529634-3529731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3527215-3527397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3523860-3523967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3523343-3523432:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3523005-3523131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3520029-3520145:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3519421-3519544:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3518178-3518268:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3516286-3516388:-1:exon

Impact
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Impact
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3733289..3757279
location: region:3733289-3757279:1
so has part: feature:3733289-3757279:1:exon
subclass of: SO_0000010

118594763
type: Gene
SIO_000068: ncbigene

position:3733289:1
position: 3733289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3757279:1
position: 3757279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3733289-3757279:1:exon

Impact
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Impact
product: impact RWD domain protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_036204922.1
SIO_010081: Impact
subclass of: SO_0000673
so part of: Impact
location: join(3733289..3733309,3734362..3734490,3735602..3735654,3737051..3737113,3744670..3744755,3746018..3746140,3746909..3747006,3749246..3749319,3751164..3751254,3753104..3753238,3753980..3757279)
location: region:3733289-3757279:1
so has part: feature:3733289-3733309:1:exon
so has part: feature:3734362-3734490:1:exon
so has part: feature:3735602-3735654:1:exon
so has part: feature:3737051-3737113:1:exon
so has part: feature:3744670-3744755:1:exon
so has part: feature:3746018-3746140:1:exon
so has part: feature:3746909-3747006:1:exon
so has part: feature:3749246-3749319:1:exon
so has part: feature:3751164-3751254:1:exon
so has part: feature:3753104-3753238:1:exon
so has part: feature:3753980-3757279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3733289-3733309:1:exon

position:3733309:1
position: 3733309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3734362-3734490:1:exon

position:3734362:1
position: 3734362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3734490:1
position: 3734490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3735602-3735654:1:exon

position:3735602:1
position: 3735602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3735654:1
position: 3735654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3737051-3737113:1:exon

position:3737051:1
position: 3737051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3737113:1
position: 3737113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3744670-3744755:1:exon

position:3744670:1
position: 3744670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3744755:1
position: 3744755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3746018-3746140:1:exon

position:3746018:1
position: 3746018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3746140:1
position: 3746140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3746909-3747006:1:exon

position:3746909:1
position: 3746909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3747006:1
position: 3747006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3749246-3749319:1:exon

position:3749246:1
position: 3749246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3749319:1
position: 3749319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3751164-3751254:1:exon

position:3751164:1
position: 3751164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3751254:1
position: 3751254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3753104-3753238:1:exon

position:3753104:1
position: 3753104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3753238:1
position: 3753238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3753980-3757279:1:exon

position:3753980:1
position: 3753980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Impact
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Impact
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein IMPACT isoform X2
translation: MNEEIEAMAAIYGEEWCVIDDCAKVFCIRISDDIDDPKWTLCLQVMLPSEYPGTAPPIYQLNAPWLKGQERADLSNSLEEIYIQNIGESILYLWVEKIRDVLIQKSQITEPGPDVKKKTEEEDVECEDDLIVEHQPANAVKTVDFNISEHVPEIEELPPVDHGVPITDRRSTFQAHVAPVVCPKQVKMVLAKLYENKKIASATHNIYAYRIFCEDKQTFLQDCEDDGETAAGGRLLHLMEILNVKNVMVVVSRWYGGILLGPDRFKHINNCARNILVEKNFTSSPEESSKSLGKKKVKKDKKRSEH
SIO_010081: Impact
subclass of: SO_0000673
so part of: Impact
location: join(3733307..3733309,3734362..3734490,3735602..3735654,3737051..3737113,3744670..3744755,3746018..3746140,3746909..3747006,3749246..3749319,3751164..3751254,3753104..3753238,3753980..3754045)
location: region:3733307-3754045:1
so has part: feature:3733307-3733309:1:exon
so has part: feature:3734362-3734490:1:exon
so has part: feature:3735602-3735654:1:exon
so has part: feature:3737051-3737113:1:exon
so has part: feature:3744670-3744755:1:exon
so has part: feature:3746018-3746140:1:exon
so has part: feature:3746909-3747006:1:exon
so has part: feature:3749246-3749319:1:exon
so has part: feature:3751164-3751254:1:exon
so has part: feature:3753104-3753238:1:exon
so has part: feature:3753980-3754045:1:exon

XP_036060815.1
type: Protein
SIO_000068: ncbiprotein

position:3733307:1
position: 3733307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3754045:1
position: 3754045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3733307-3733309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3734362-3734490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3735602-3735654:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3737051-3737113:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3744670-3744755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3746018-3746140:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3746909-3747006:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3749246-3749319:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3751164-3751254:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3753104-3753238:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3753980-3754045:1:exon

Impact
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Impact
product: impact RWD domain protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036204921.1
SIO_010081: Impact
subclass of: SO_0000673
so part of: Impact
location: join(3733583..3733709,3734362..3734490,3735602..3735654,3737051..3737113,3744670..3744755,3746018..3746140,3746909..3747006,3749246..3749319,3751164..3751254,3753104..3753238,3753980..3757279)
location: region:3733583-3757279:1
so has part: feature:3733583-3733709:1:exon
so has part: feature:3734362-3734490:1:exon
so has part: feature:3735602-3735654:1:exon
so has part: feature:3737051-3737113:1:exon
so has part: feature:3744670-3744755:1:exon
so has part: feature:3746018-3746140:1:exon
so has part: feature:3746909-3747006:1:exon
so has part: feature:3749246-3749319:1:exon
so has part: feature:3751164-3751254:1:exon
so has part: feature:3753104-3753238:1:exon
so has part: feature:3753980-3757279:1:exon

position:3733583:1
position: 3733583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3733583-3733709:1:exon

position:3733709:1
position: 3733709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3734362-3734490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3735602-3735654:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3737051-3737113:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3744670-3744755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3746018-3746140:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3746909-3747006:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3749246-3749319:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3751164-3751254:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3753104-3753238:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3753980-3757279:1:exon

Impact
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Impact
product: impact RWD domain protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_036204923.1
SIO_010081: Impact
subclass of: SO_0000673
so part of: Impact
location: join(3733583..3733709,3734362..3734490,3735602..3735654,3737051..3737113,3744670..3744755,3746018..3746140,3746909..3747006,3753104..3753238,3753980..3757279)
location: region:3733583-3757279:1
so has part: feature:3733583-3733709:1:exon
so has part: feature:3734362-3734490:1:exon
so has part: feature:3735602-3735654:1:exon
so has part: feature:3737051-3737113:1:exon
so has part: feature:3744670-3744755:1:exon
so has part: feature:3746018-3746140:1:exon
so has part: feature:3746909-3747006:1:exon
so has part: feature:3753104-3753238:1:exon
so has part: feature:3753980-3757279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3733583-3733709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3734362-3734490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3735602-3735654:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3737051-3737113:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3744670-3744755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3746018-3746140:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3746909-3747006:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3753104-3753238:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3753980-3757279:1:exon

Impact
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Impact
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein IMPACT isoform X1
translation: MAEGDVGSDQRQNEEIEAMAAIYGEEWCVIDDCAKVFCIRISDDIDDPKWTLCLQVMLPSEYPGTAPPIYQLNAPWLKGQERADLSNSLEEIYIQNIGESILYLWVEKIRDVLIQKSQITEPGPDVKKKTEEEDVECEDDLIVEHQPANAVKTVDFNISEHVPEIEELPPVDHGVPITDRRSTFQAHVAPVVCPKQVKMVLAKLYENKKIASATHNIYAYRIFCEDKQTFLQDCEDDGETAAGGRLLHLMEILNVKNVMVVVSRWYGGILLGPDRFKHINNCARNILVEKNFTSSPEESSKSLGKKKVKKDKKRSEH
SIO_010081: Impact
subclass of: SO_0000673
so part of: Impact
location: join(3733674..3733709,3734362..3734490,3735602..3735654,3737051..3737113,3744670..3744755,3746018..3746140,3746909..3747006,3749246..3749319,3751164..3751254,3753104..3753238,3753980..3754045)
location: region:3733674-3754045:1
so has part: feature:3733674-3733709:1:exon
so has part: feature:3734362-3734490:1:exon
so has part: feature:3735602-3735654:1:exon
so has part: feature:3737051-3737113:1:exon
so has part: feature:3744670-3744755:1:exon
so has part: feature:3746018-3746140:1:exon
so has part: feature:3746909-3747006:1:exon
so has part: feature:3749246-3749319:1:exon
so has part: feature:3751164-3751254:1:exon
so has part: feature:3753104-3753238:1:exon
so has part: feature:3753980-3754045:1:exon

XP_036060814.1
type: Protein
SIO_000068: ncbiprotein

position:3733674:1
position: 3733674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3733674-3733709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3734362-3734490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3735602-3735654:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3737051-3737113:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3744670-3744755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3746018-3746140:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3746909-3747006:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3749246-3749319:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3751164-3751254:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3753104-3753238:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3753980-3754045:1:exon

Impact
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Impact
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein IMPACT isoform X3
translation: MAEGDVGSDQRQNEEIEAMAAIYGEEWCVIDDCAKVFCIRISDDIDDPKWTLCLQVMLPSEYPGTAPPIYQLNAPWLKGQERADLSNSLEEIYIQNIGESILYLWVEKIRDVLIQKSQITEPGPDVKKKTEEEDVECEDDLIVEHQPANAVKTVDFNISEHVPEIEELPPVDHGVPITDRRSTFQAHVAPVVCPKQILNVKNVMVVVSRWYGGILLGPDRFKHINNCARNILVEKNFTSSPEESSKSLGKKKVKKDKKRSEH
SIO_010081: Impact
subclass of: SO_0000673
so part of: Impact
location: join(3733674..3733709,3734362..3734490,3735602..3735654,3737051..3737113,3744670..3744755,3746018..3746140,3746909..3747006,3753104..3753238,3753980..3754045)
location: region:3733674-3754045:1
so has part: feature:3733674-3733709:1:exon
so has part: feature:3734362-3734490:1:exon
so has part: feature:3735602-3735654:1:exon
so has part: feature:3737051-3737113:1:exon
so has part: feature:3744670-3744755:1:exon
so has part: feature:3746018-3746140:1:exon
so has part: feature:3746909-3747006:1:exon
so has part: feature:3753104-3753238:1:exon
so has part: feature:3753980-3754045:1:exon

XP_036060816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3733674-3733709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3734362-3734490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3735602-3735654:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3737051-3737113:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3744670-3744755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3746018-3746140:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3746909-3747006:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3753104-3753238:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3753980-3754045:1:exon

Impact
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Impact
product: impact RWD domain protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_036204924.1
SIO_010081: Impact
subclass of: SO_0000673
so part of: Impact
location: join(3734393..3734490,3737051..3737113,3744670..3744755,3746018..3746140,3746909..3747006,3749246..3749319,3751164..3751254,3753104..3753238,3753980..3757279)
location: region:3734393-3757279:1
so has part: feature:3734393-3734490:1:exon
so has part: feature:3737051-3737113:1:exon
so has part: feature:3744670-3744755:1:exon
so has part: feature:3746018-3746140:1:exon
so has part: feature:3746909-3747006:1:exon
so has part: feature:3749246-3749319:1:exon
so has part: feature:3751164-3751254:1:exon
so has part: feature:3753104-3753238:1:exon
so has part: feature:3753980-3757279:1:exon

position:3734393:1
position: 3734393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3734393-3734490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3737051-3737113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3744670-3744755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3746018-3746140:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3746909-3747006:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3749246-3749319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3751164-3751254:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3753104-3753238:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3753980-3757279:1:exon

Impact
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Impact
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein IMPACT isoform X4
translation: MTQSGHFACSAPWLKGQERADLSNSLEEIYIQNIGESILYLWVEKIRDVLIQKSQITEPGPDVKKKTEEEDVECEDDLIVEHQPANAVKTVDFNISEHVPEIEELPPVDHGVPITDRRSTFQAHVAPVVCPKQVKMVLAKLYENKKIASATHNIYAYRIFCEDKQTFLQDCEDDGETAAGGRLLHLMEILNVKNVMVVVSRWYGGILLGPDRFKHINNCARNILVEKNFTSSPEESSKSLGKKKVKKDKKRSEH
SIO_010081: Impact
subclass of: SO_0000673
so part of: Impact
location: join(3734462..3734490,3737051..3737113,3744670..3744755,3746018..3746140,3746909..3747006,3749246..3749319,3751164..3751254,3753104..3753238,3753980..3754045)
location: region:3734462-3754045:1
so has part: feature:3734462-3734490:1:exon
so has part: feature:3737051-3737113:1:exon
so has part: feature:3744670-3744755:1:exon
so has part: feature:3746018-3746140:1:exon
so has part: feature:3746909-3747006:1:exon
so has part: feature:3749246-3749319:1:exon
so has part: feature:3751164-3751254:1:exon
so has part: feature:3753104-3753238:1:exon
so has part: feature:3753980-3754045:1:exon

XP_036060817.1
type: Protein
SIO_000068: ncbiprotein

position:3734462:1
position: 3734462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3734462-3734490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3737051-3737113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3744670-3744755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3746018-3746140:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3746909-3747006:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3749246-3749319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3751164-3751254:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3753104-3753238:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3753980-3754045:1:exon

LOC118594430
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594430
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3772938..3773726)
location: region:3772938-3773726:-1
so has part: feature:3772938-3773726:-1:exon

118594430
type: Gene
SIO_000068: ncbigene

position:3772938:-1
position: 3772938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3773726:-1
position: 3773726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3772938-3773726:-1:exon

LOC118594430
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118594430
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC118594430
subclass of: SO_0000673
so part of: LOC118594430
location: complement(3772938..3773726)
location: region:3772938-3773726:-1
so has part: feature:3772938-3773726:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3772938-3773726:-1:exon

Hrh4
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Hrh4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3775849..3781589
location: region:3775849-3781589:1
so has part: feature:3775849-3781589:1:exon
subclass of: SO_0000010

118594936
type: Gene
SIO_000068: ncbigene

position:3775849:1
position: 3775849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3781589:1
position: 3781589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3775849-3781589:1:exon

Hrh4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Hrh4
product: histamine receptor H4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_036205191.1
SIO_010081: Hrh4
subclass of: SO_0000673
so part of: Hrh4
location: join(3775849..3776045,3781448..3781589)
location: region:3775849-3781589:1
so has part: feature:3775849-3776045:1:exon
so has part: feature:3781448-3781589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3775849-3776045:1:exon

position:3776045:1
position: 3776045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3781448-3781589:1:exon

position:3781448:1
position: 3781448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Hrh4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Hrh4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histamine H4 receptor
translation: MLDANSSGSLPLAAKVSLAVFMSLLAFAIMLGNAVVILAFLVDKNLRHRSNYFFLNLAISDFFVGKEEPRTGHLHCAEHKDAVEFYQRSGTGVMIQSFHKHEDLGSIPGSYL
SIO_010081: Hrh4
subclass of: SO_0000673
so part of: Hrh4
location: join(3775849..3776045,3781448..3781589)
location: region:3775849-3781589:1
so has part: feature:3775849-3776045:1:exon
so has part: feature:3781448-3781589:1:exon

XP_036061084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3775849-3776045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3781448-3781589:1:exon

LOC118594937
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3782358..3792569
location: region:3782358-3792569:1
so has part: feature:3782358-3792569:1:exon
subclass of: SO_0000010

118594937
type: Gene
SIO_000068: ncbigene

position:3782358:1
position: 3782358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3792569:1
position: 3792569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3782358-3792569:1:exon

LOC118594937
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: LOC118594937
product: histamine H4 receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036205193.1
SIO_010081: LOC118594937
subclass of: SO_0000673
so part of: LOC118594937
location: join(3782358..3782415,3784370..3784533,3791670..3792569)
location: region:3782358-3792569:1
so has part: feature:3782358-3782415:1:exon
so has part: feature:3784370-3784533:1:exon
so has part: feature:3791670-3792569:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3782358-3782415:1:exon

position:3782415:1
position: 3782415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3784370-3784533:1:exon

position:3784370:1
position: 3784370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3784533:1
position: 3784533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3791670-3792569:1:exon

position:3791670:1
position: 3791670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118594937
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: LOC118594937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histamine H4 receptor-like
translation: MKLAGYQNHVLMVDRFGDSGMISIPLYIPHTLFNWNFGSEICIFWLIIDYLLCTASVYNIVLISYDRYQSVSNAVSYRAQHTGIVKIVAPMVAVWILAFLVNGPMILASHSWKNSTNTKECEPGFVTEWYILAITSFLEFFVPVISVAYFNVQIYWSLWKRGSLNRCPSHVGFISTSSSDDGPLPRAGLVSRTSLPALKESAPSLHSESPRRKSSLLVSFRTHMNSRFIAFKVGSFSHSETLALHHREHMELLRGRKLARSLAILLTAFFICWAPYCLVTIVFSTYAEGKRPKSVWYSIAFWLQWFNSFVNPFLYPLCHRHFQKAFWKIFCVKKQSAPSQNRSISS
SIO_010081: LOC118594937
subclass of: SO_0000673
so part of: LOC118594937
location: join(3782358..3782415,3784370..3784533,3791670..3792488)
location: region:3782358-3792488:1
so has part: feature:3782358-3782415:1:exon
so has part: feature:3784370-3784533:1:exon
so has part: feature:3791670-3792488:1:exon

XP_036061086.1
type: Protein
SIO_000068: ncbiprotein

position:3792488:1
position: 3792488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3782358-3782415:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3784370-3784533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3791670-3792488:1:exon

LOC118594448
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594448
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4237443..4245046
location: region:4237443-4245046:1
so has part: feature:4237443-4245046:1:exon
subclass of: SO_0000011

118594448
type: Gene
SIO_000068: ncbigene

position:4237443:1
position: 4237443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4245046:1
position: 4245046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4237443-4245046:1:exon

LOC118594448
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: lncRNA
gene: LOC118594448
product: uncharacterized LOC118594448
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004946385.1
SIO_010081: LOC118594448
subclass of: SO_0000673
so part of: LOC118594448
location: join(4237443..4237851,4240353..4240460,4244768..4245046)
location: region:4237443-4245046:1
so has part: feature:4237443-4237851:1:exon
so has part: feature:4240353-4240460:1:exon
so has part: feature:4244768-4245046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4237443-4237851:1:exon

position:4237851:1
position: 4237851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4240353-4240460:1:exon

position:4240353:1
position: 4240353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4240460:1
position: 4240460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4244768-4245046:1:exon

position:4244768:1
position: 4244768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Znf521
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Znf521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4389802..4674910)
location: region:4389802-4674910:-1
so has part: feature:4389802-4674910:-1:exon
subclass of: SO_0000010

118594858
type: Gene
SIO_000068: ncbigene

position:4389802:-1
position: 4389802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4674910:-1
position: 4674910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4389802-4674910:-1:exon

Znf521
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Znf521
product: zinc finger protein 521, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036205083.1
SIO_010081: Znf521
subclass of: SO_0000673
so part of: Znf521
location: complement(join(4389802..4390615,4416600..4416715,4419065..4419196,4520225..4520309,4546040..4549392,4640399..4640578,4674638..4674910))
location: region:4389802-4674910:-1
so has part: feature:4674638-4674910:-1:exon
so has part: feature:4640399-4640578:-1:exon
so has part: feature:4546040-4549392:-1:exon
so has part: feature:4520225-4520309:-1:exon
so has part: feature:4419065-4419196:-1:exon
so has part: feature:4416600-4416715:-1:exon
so has part: feature:4389802-4390615:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4674638-4674910:-1:exon

position:4674638:-1
position: 4674638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4640399-4640578:-1:exon

position:4640399:-1
position: 4640399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4640578:-1
position: 4640578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4546040-4549392:-1:exon

position:4546040:-1
position: 4546040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4549392:-1
position: 4549392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4520225-4520309:-1:exon

position:4520225:-1
position: 4520225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4520309:-1
position: 4520309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4419065-4419196:-1:exon

position:4419065:-1
position: 4419065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4419196:-1
position: 4419196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4416600-4416715:-1:exon

position:4416600:-1
position: 4416600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4416715:-1
position: 4416715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4389802-4390615:-1:exon

position:4390615:-1
position: 4390615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Znf521
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Znf521
product: zinc finger protein 521, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036205082.1
SIO_010081: Znf521
subclass of: SO_0000673
so part of: Znf521
location: complement(join(4389802..4390615,4416600..4416715,4419065..4419196,4520225..4520306,4546040..4549392,4640399..4640578,4673487..4673527,4674638..4674870))
location: region:4389802-4674870:-1
so has part: feature:4674638-4674870:-1:exon
so has part: feature:4673487-4673527:-1:exon
so has part: feature:4640399-4640578:-1:exon
so has part: feature:4546040-4549392:-1:exon
so has part: feature:4520225-4520306:-1:exon
so has part: feature:4419065-4419196:-1:exon
so has part: feature:4416600-4416715:-1:exon
so has part: feature:4389802-4390615:-1:exon

position:4674870:-1
position: 4674870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4674638-4674870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4673487-4673527:-1:exon

position:4673487:-1
position: 4673487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4673527:-1
position: 4673527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4640399-4640578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4546040-4549392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4520225-4520306:-1:exon

position:4520306:-1
position: 4520306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4419065-4419196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4416600-4416715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4389802-4390615:-1:exon

Znf521
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Znf521
product: zinc finger protein 521, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_036205081.1
SIO_010081: Znf521
subclass of: SO_0000673
so part of: Znf521
location: complement(join(4389802..4390615,4416600..4416715,4419065..4419196,4520225..4520309,4546040..4549392,4640399..4640578,4673487..4673527,4674638..4674870))
location: region:4389802-4674870:-1
so has part: feature:4674638-4674870:-1:exon
so has part: feature:4673487-4673527:-1:exon
so has part: feature:4640399-4640578:-1:exon
so has part: feature:4546040-4549392:-1:exon
so has part: feature:4520225-4520309:-1:exon
so has part: feature:4419065-4419196:-1:exon
so has part: feature:4416600-4416715:-1:exon
so has part: feature:4389802-4390615:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4674638-4674870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4673487-4673527:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4640399-4640578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4546040-4549392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4520225-4520309:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4419065-4419196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4416600-4416715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4389802-4390615:-1:exon

Znf521
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Znf521
product: zinc finger protein 521, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036205084.1
SIO_010081: Znf521
subclass of: SO_0000673
so part of: Znf521
location: complement(join(4389802..4390615,4416600..4416715,4419065..4419196,4520225..4520309,4546040..4549392,4633316..4633363))
location: region:4389802-4633363:-1
so has part: feature:4633316-4633363:-1:exon
so has part: feature:4546040-4549392:-1:exon
so has part: feature:4520225-4520309:-1:exon
so has part: feature:4419065-4419196:-1:exon
so has part: feature:4416600-4416715:-1:exon
so has part: feature:4389802-4390615:-1:exon

position:4633363:-1
position: 4633363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4633316-4633363:-1:exon

position:4633316:-1
position: 4633316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4546040-4549392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4520225-4520309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4419065-4419196:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4416600-4416715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4389802-4390615:-1:exon

Znf521
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Znf521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 521 isoform X2
translation: MSRRKQAKPRSLKDPNCKLEEKTEDGEVLDCKKRPEDSEELEDEAVHSCDSCLQVFESLSDITEHKIHQCQLTDGVDVEDDPTCSWPASSPSSKDQTSPSHGEGCDFGEEEGGPGLPYPCQFCDKSFSRLSYLKHHEQSHSDKLPFKCTYCSRLFKHKRSRDRHIKLHTGDKKYHCSECDAAFSRSDHLKIHLKTHTSNKPYKCAICRRGFLSSSSLHGHMQVHERNKDGSQSGSRMEDWKMKDTQKCSQCEEGFDFPEDLQKHIAECHPECSPNEDRAALQCMYCHELFVEETSLMNHIEQVHGGEKKNSCSICSESFLTVEELYSHMDSHQQPESCNHSNSPSLVTVGYTSVSSTTPDSNLSVDSSTMVEAAPPIPKSRGRKRAAQQPADMTGPSSKQAKVTYSCIYCNKQLFSSLAVLQIHLKTMHLDKPEQAHICQYCLEVLPSLYNLNEHLKQVHEAQDPGLIVSAMPAIVYQCNFCSEVVNDLNTLQEHIRCSHGFANPAAKDSNAFFCPHCYMGFLTDSSLEEHIRQVHCDLSGSRFGSPVLGTPKEPVVEVYSCSYCTNSPIFNSVLKLNKHIKENHKNIPLALNYIHNGKKSRALSPLSPVAIEQTSLKMMQAVGGGPARSAGEYICNQCGAKYTSLDSFQTHLKTHLDTVLPKLTCPQCNKEFPNQESLLKHVTIHFMITSTYYICESCDKQFTSVDDLQKHLLDMHTFVFFRCTLCQEVFDSKVSIQLHLAVKHSNEKKVYRCTSCNWDFRNETDLQLHVKHNHLENQGKVHKCIFCGESFGTEVELQCHITTHSKKYNCRFCSKAFHAVILLEKHLREKHCVFETKTPNCGTNGASEQVQKEEAELQTLLTNSQESHNSHDGSEEDVDSSEPMYGCDICGAAYTMETLLQNHQLRDHNIRPGESAIVKKKAELIKGNYKCNVCSRTFFSENGLREHMQTHLGPVKHYMCPICGERFPSLLTLTEHKVTHSKSLDTGNCRICKMPLQSEEEFLEHCQMHPDLRNSLTGFRCVVCMQTVTSTLELKIHGTFHMQKTGNGSTVQTTGRGQHVQKLYKCASCLKEFRSKQDLVKLDINGLPYGLCAGCVNLSKSSSPGLSLPPGTSRPGLGQNENLSAMEGKGKAGGLKTRCSSCNVKFESESELQNHIQTVHRELLPDGNSTQLKTPQVSPMPRISPSQSDEKTYQCIKCQMVFYNEWDIQVHVANHMIDEGLNHECKLCSQTFDSPAKLQCHLIEHSFEGMGGTFKCPVCFTVFVQANKLQQHIFSAHGQEDKIYDCTQCPQKFFFQTELQNHTMTQHSS
SIO_010081: Znf521
subclass of: SO_0000673
so part of: Znf521
location: complement(join(4390586..4390615,4416600..4416715,4419065..4419196,4520225..4520306,4546040..4549392,4640399..4640578,4673487..4673526))
location: region:4390586-4673526:-1
so has part: feature:4673487-4673526:-1:exon
so has part: feature:4640399-4640578:-1:exon
so has part: feature:4546040-4549392:-1:exon
so has part: feature:4520225-4520306:-1:exon
so has part: feature:4419065-4419196:-1:exon
so has part: feature:4416600-4416715:-1:exon
so has part: feature:4390586-4390615:-1:exon

XP_036060975.1
type: Protein
SIO_000068: ncbiprotein

position:4390586:-1
position: 4390586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4673526:-1
position: 4673526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4673487-4673526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4640399-4640578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4546040-4549392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4520225-4520306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4419065-4419196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4416600-4416715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4390586-4390615:-1:exon

Znf521
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Znf521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 521 isoform X1
translation: MSRRKQAKPRSLKDPNCKLEEKTEDGEVLDCKKRPEDSEELEDEAVHSCDSCLQVFESLSDITEHKIHQCQLTDGVDVEDDPTCSWPASSPSSKDQTSPSHGEGCDFGEEEGGPGLPYPCQFCDKSFSRLSYLKHHEQSHSDKLPFKCTYCSRLFKHKRSRDRHIKLHTGDKKYHCSECDAAFSRSDHLKIHLKTHTSNKPYKCAICRRGFLSSSSLHGHMQVHERNKDGSQSGSRMEDWKMKDTQKCSQCEEGFDFPEDLQKHIAECHPECSPNEDRAALQCMYCHELFVEETSLMNHIEQVHGGEKKNSCSICSESFLTVEELYSHMDSHQQPESCNHSNSPSLVTVGYTSVSSTTPDSNLSVDSSTMVEAAPPIPKSRGRKRAAQQPADMTGPSSKQAKVTYSCIYCNKQLFSSLAVLQIHLKTMHLDKPEQAHICQYCLEVLPSLYNLNEHLKQVHEAQDPGLIVSAMPAIVYQCNFCSEVVNDLNTLQEHIRCSHGFANPAAKDSNAFFCPHCYMGFLTDSSLEEHIRQVHCDLSGSRFGSPVLGTPKEPVVEVYSCSYCTNSPIFNSVLKLNKHIKENHKNIPLALNYIHNGKKSRALSPLSPVAIEQTSLKMMQAVGGGPARSAGEYICNQCGAKYTSLDSFQTHLKTHLDTVLPKLTCPQCNKEFPNQESLLKHVTIHFMITSTYYICESCDKQFTSVDDLQKHLLDMHTFVFFRCTLCQEVFDSKVSIQLHLAVKHSNEKKVYRCTSCNWDFRNETDLQLHVKHNHLENQGKVHKCIFCGESFGTEVELQCHITTHSKKYNCRFCSKAFHAVILLEKHLREKHCVFETKTPNCGTNGASEQVQKEEAELQTLLTNSQESHNSHDGSEEDVDSSEPMYGCDICGAAYTMETLLQNHQLRDHNIRPGESAIVKKKAELIKGNYKCNVCSRTFFSENGLREHMQTHLGPVKHYMCPICGERFPSLLTLTEHKVTHSKSLDTGNCRICKMPLQSEEEFLEHCQMHPDLRNSLTGFRCVVCMQTVTSTLELKIHGTFHMQKTGNGSTVQTTGRGQHVQKLYKCASCLKEFRSKQDLVKLDINGLPYGLCAGCVNLSKSSSPGLSLPPGTSRPGLGQNENLSAMEGKGKAGGLKTRCSSCNVKFESESELQNHIQTVHRELLPDGNSTQLKTPQVSPMPRISPSQSDEKKTYQCIKCQMVFYNEWDIQVHVANHMIDEGLNHECKLCSQTFDSPAKLQCHLIEHSFEGMGGTFKCPVCFTVFVQANKLQQHIFSAHGQEDKIYDCTQCPQKFFFQTELQNHTMTQHSS
SIO_010081: Znf521
subclass of: SO_0000673
so part of: Znf521
location: complement(join(4390586..4390615,4416600..4416715,4419065..4419196,4520225..4520309,4546040..4549392,4640399..4640578,4673487..4673526))
location: region:4390586-4673526:-1
so has part: feature:4673487-4673526:-1:exon
so has part: feature:4640399-4640578:-1:exon
so has part: feature:4546040-4549392:-1:exon
so has part: feature:4520225-4520309:-1:exon
so has part: feature:4419065-4419196:-1:exon
so has part: feature:4416600-4416715:-1:exon
so has part: feature:4390586-4390615:-1:exon

XP_036060974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4673487-4673526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4640399-4640578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4546040-4549392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4520225-4520309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4419065-4419196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4416600-4416715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4390586-4390615:-1:exon

Znf521
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Znf521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 521 isoform X3
translation: MQVHERNKDGSQSGSRMEDWKMKDTQKCSQCEEGFDFPEDLQKHIAECHPECSPNEDRAALQCMYCHELFVEETSLMNHIEQVHGGEKKNSCSICSESFLTVEELYSHMDSHQQPESCNHSNSPSLVTVGYTSVSSTTPDSNLSVDSSTMVEAAPPIPKSRGRKRAAQQPADMTGPSSKQAKVTYSCIYCNKQLFSSLAVLQIHLKTMHLDKPEQAHICQYCLEVLPSLYNLNEHLKQVHEAQDPGLIVSAMPAIVYQCNFCSEVVNDLNTLQEHIRCSHGFANPAAKDSNAFFCPHCYMGFLTDSSLEEHIRQVHCDLSGSRFGSPVLGTPKEPVVEVYSCSYCTNSPIFNSVLKLNKHIKENHKNIPLALNYIHNGKKSRALSPLSPVAIEQTSLKMMQAVGGGPARSAGEYICNQCGAKYTSLDSFQTHLKTHLDTVLPKLTCPQCNKEFPNQESLLKHVTIHFMITSTYYICESCDKQFTSVDDLQKHLLDMHTFVFFRCTLCQEVFDSKVSIQLHLAVKHSNEKKVYRCTSCNWDFRNETDLQLHVKHNHLENQGKVHKCIFCGESFGTEVELQCHITTHSKKYNCRFCSKAFHAVILLEKHLREKHCVFETKTPNCGTNGASEQVQKEEAELQTLLTNSQESHNSHDGSEEDVDSSEPMYGCDICGAAYTMETLLQNHQLRDHNIRPGESAIVKKKAELIKGNYKCNVCSRTFFSENGLREHMQTHLGPVKHYMCPICGERFPSLLTLTEHKVTHSKSLDTGNCRICKMPLQSEEEFLEHCQMHPDLRNSLTGFRCVVCMQTVTSTLELKIHGTFHMQKTGNGSTVQTTGRGQHVQKLYKCASCLKEFRSKQDLVKLDINGLPYGLCAGCVNLSKSSSPGLSLPPGTSRPGLGQNENLSAMEGKGKAGGLKTRCSSCNVKFESESELQNHIQTVHRELLPDGNSTQLKTPQVSPMPRISPSQSDEKKTYQCIKCQMVFYNEWDIQVHVANHMIDEGLNHECKLCSQTFDSPAKLQCHLIEHSFEGMGGTFKCPVCFTVFVQANKLQQHIFSAHGQEDKIYDCTQCPQKFFFQTELQNHTMTQHSS
SIO_010081: Znf521
subclass of: SO_0000673
so part of: Znf521
location: complement(join(4390586..4390615,4416600..4416715,4419065..4419196,4520225..4520309,4546040..4548952))
location: region:4390586-4548952:-1
so has part: feature:4546040-4548952:-1:exon
so has part: feature:4520225-4520309:-1:exon
so has part: feature:4419065-4419196:-1:exon
so has part: feature:4416600-4416715:-1:exon
so has part: feature:4390586-4390615:-1:exon

XP_036060976.1
type: Protein
SIO_000068: ncbiprotein

position:4548952:-1
position: 4548952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4546040-4548952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4520225-4520309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4419065-4419196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4416600-4416715:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4390586-4390615:-1:exon

Znf521
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Znf521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 521 isoform X3
translation: MQVHERNKDGSQSGSRMEDWKMKDTQKCSQCEEGFDFPEDLQKHIAECHPECSPNEDRAALQCMYCHELFVEETSLMNHIEQVHGGEKKNSCSICSESFLTVEELYSHMDSHQQPESCNHSNSPSLVTVGYTSVSSTTPDSNLSVDSSTMVEAAPPIPKSRGRKRAAQQPADMTGPSSKQAKVTYSCIYCNKQLFSSLAVLQIHLKTMHLDKPEQAHICQYCLEVLPSLYNLNEHLKQVHEAQDPGLIVSAMPAIVYQCNFCSEVVNDLNTLQEHIRCSHGFANPAAKDSNAFFCPHCYMGFLTDSSLEEHIRQVHCDLSGSRFGSPVLGTPKEPVVEVYSCSYCTNSPIFNSVLKLNKHIKENHKNIPLALNYIHNGKKSRALSPLSPVAIEQTSLKMMQAVGGGPARSAGEYICNQCGAKYTSLDSFQTHLKTHLDTVLPKLTCPQCNKEFPNQESLLKHVTIHFMITSTYYICESCDKQFTSVDDLQKHLLDMHTFVFFRCTLCQEVFDSKVSIQLHLAVKHSNEKKVYRCTSCNWDFRNETDLQLHVKHNHLENQGKVHKCIFCGESFGTEVELQCHITTHSKKYNCRFCSKAFHAVILLEKHLREKHCVFETKTPNCGTNGASEQVQKEEAELQTLLTNSQESHNSHDGSEEDVDSSEPMYGCDICGAAYTMETLLQNHQLRDHNIRPGESAIVKKKAELIKGNYKCNVCSRTFFSENGLREHMQTHLGPVKHYMCPICGERFPSLLTLTEHKVTHSKSLDTGNCRICKMPLQSEEEFLEHCQMHPDLRNSLTGFRCVVCMQTVTSTLELKIHGTFHMQKTGNGSTVQTTGRGQHVQKLYKCASCLKEFRSKQDLVKLDINGLPYGLCAGCVNLSKSSSPGLSLPPGTSRPGLGQNENLSAMEGKGKAGGLKTRCSSCNVKFESESELQNHIQTVHRELLPDGNSTQLKTPQVSPMPRISPSQSDEKKTYQCIKCQMVFYNEWDIQVHVANHMIDEGLNHECKLCSQTFDSPAKLQCHLIEHSFEGMGGTFKCPVCFTVFVQANKLQQHIFSAHGQEDKIYDCTQCPQKFFFQTELQNHTMTQHSS
SIO_010081: Znf521
subclass of: SO_0000673
so part of: Znf521
location: complement(join(4390586..4390615,4416600..4416715,4419065..4419196,4520225..4520309,4546040..4548952))
location: region:4390586-4548952:-1
so has part: feature:4546040-4548952:-1:exon
so has part: feature:4520225-4520309:-1:exon
so has part: feature:4419065-4419196:-1:exon
so has part: feature:4416600-4416715:-1:exon
so has part: feature:4390586-4390615:-1:exon

XP_036060977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4546040-4548952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4520225-4520309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4419065-4419196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4416600-4416715:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4390586-4390615:-1:exon

LOC118595054
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118595054
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(5144001..5144112)
location: region:5144001-5144112:-1
so has part: feature:5144001-5144112:-1:exon

118595054
type: Gene
SIO_000068: ncbigene

position:5144001:-1
position: 5144001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5144112:-1
position: 5144112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5144001-5144112:-1:exon

LOC118595054
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118595054
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118595054
subclass of: SO_0000673
so part of: LOC118595054
location: complement(5144001..5144112)
location: region:5144001-5144112:-1
so has part: feature:5144001-5144112:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5144001-5144112:-1:exon

Ss18
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Ss18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5362499..5432048)
location: region:5362499-5432048:-1
so has part: feature:5362499-5432048:-1:exon
subclass of: SO_0000010

118594714
type: Gene
SIO_000068: ncbigene

position:5362499:-1
position: 5362499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5432048:-1
position: 5432048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5362499-5432048:-1:exon

Ss18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ss18
product: SS18 subunit of BAF chromatin remodeling complex, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036204842.1
SIO_010081: Ss18
subclass of: SO_0000673
so part of: Ss18
location: complement(join(5362499..5364205,5369444..5369577,5372696..5372821,5373496..5373588,5376543..5376647,5377304..5377471,5386781..5387002,5391246..5391399,5419253..5419337,5428450..5428526,5431801..5432048))
location: region:5362499-5432048:-1
so has part: feature:5431801-5432048:-1:exon
so has part: feature:5428450-5428526:-1:exon
so has part: feature:5419253-5419337:-1:exon
so has part: feature:5391246-5391399:-1:exon
so has part: feature:5386781-5387002:-1:exon
so has part: feature:5377304-5377471:-1:exon
so has part: feature:5376543-5376647:-1:exon
so has part: feature:5373496-5373588:-1:exon
so has part: feature:5372696-5372821:-1:exon
so has part: feature:5369444-5369577:-1:exon
so has part: feature:5362499-5364205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5431801-5432048:-1:exon

position:5431801:-1
position: 5431801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5428450-5428526:-1:exon

position:5428450:-1
position: 5428450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5428526:-1
position: 5428526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5419253-5419337:-1:exon

position:5419253:-1
position: 5419253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5419337:-1
position: 5419337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5391246-5391399:-1:exon

position:5391246:-1
position: 5391246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5391399:-1
position: 5391399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5386781-5387002:-1:exon

position:5386781:-1
position: 5386781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5387002:-1
position: 5387002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5377304-5377471:-1:exon

position:5377304:-1
position: 5377304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5377471:-1
position: 5377471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5376543-5376647:-1:exon

position:5376543:-1
position: 5376543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5376647:-1
position: 5376647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5373496-5373588:-1:exon

position:5373496:-1
position: 5373496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5373588:-1
position: 5373588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5372696-5372821:-1:exon

position:5372696:-1
position: 5372696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5372821:-1
position: 5372821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5369444-5369577:-1:exon

position:5369444:-1
position: 5369444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5369577:-1
position: 5369577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5362499-5364205:-1:exon

position:5364205:-1
position: 5364205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ss18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ss18
product: SS18 subunit of BAF chromatin remodeling complex, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036204844.1
SIO_010081: Ss18
subclass of: SO_0000673
so part of: Ss18
location: complement(join(5362499..5364205,5369444..5369577,5372696..5372821,5376543..5376647,5377304..5377471,5386781..5387002,5391246..5391399,5419253..5419337,5428450..5428526,5431801..5431941))
location: region:5362499-5431941:-1
so has part: feature:5431801-5431941:-1:exon
so has part: feature:5428450-5428526:-1:exon
so has part: feature:5419253-5419337:-1:exon
so has part: feature:5391246-5391399:-1:exon
so has part: feature:5386781-5387002:-1:exon
so has part: feature:5377304-5377471:-1:exon
so has part: feature:5376543-5376647:-1:exon
so has part: feature:5372696-5372821:-1:exon
so has part: feature:5369444-5369577:-1:exon
so has part: feature:5362499-5364205:-1:exon

position:5431941:-1
position: 5431941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5431801-5431941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5428450-5428526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5419253-5419337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5391246-5391399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5386781-5387002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5377304-5377471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5376543-5376647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5372696-5372821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5369444-5369577:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5362499-5364205:-1:exon

Ss18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Ss18
product: SS18 subunit of BAF chromatin remodeling complex, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_036204843.1
SIO_010081: Ss18
subclass of: SO_0000673
so part of: Ss18
location: complement(join(5362499..5364205,5369444..5369577,5372696..5372821,5373496..5373588,5377304..5377471,5386781..5387002,5391246..5391399,5419253..5419337,5428450..5428526,5431801..5431923))
location: region:5362499-5431923:-1
so has part: feature:5431801-5431923:-1:exon
so has part: feature:5428450-5428526:-1:exon
so has part: feature:5419253-5419337:-1:exon
so has part: feature:5391246-5391399:-1:exon
so has part: feature:5386781-5387002:-1:exon
so has part: feature:5377304-5377471:-1:exon
so has part: feature:5373496-5373588:-1:exon
so has part: feature:5372696-5372821:-1:exon
so has part: feature:5369444-5369577:-1:exon
so has part: feature:5362499-5364205:-1:exon

position:5431923:-1
position: 5431923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5431801-5431923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5428450-5428526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5419253-5419337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5391246-5391399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5386781-5387002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5377304-5377471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5373496-5373588:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5372696-5372821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5369444-5369577:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5362499-5364205:-1:exon

Ss18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ss18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SSXT isoform X2
translation: MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMPMGPGGMSQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPSQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQMPPYRPPQQGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQQYPGQQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRAAQPGPPQPPQQRPYGYDQGQYGNYQQ
SIO_010081: Ss18
subclass of: SO_0000673
so part of: Ss18
location: complement(join(5364179..5364205,5369444..5369577,5372696..5372821,5373496..5373588,5377304..5377471,5386781..5387002,5391246..5391399,5419253..5419337,5428450..5428526,5431801..5431869))
location: region:5364179-5431869:-1
so has part: feature:5431801-5431869:-1:exon
so has part: feature:5428450-5428526:-1:exon
so has part: feature:5419253-5419337:-1:exon
so has part: feature:5391246-5391399:-1:exon
so has part: feature:5386781-5387002:-1:exon
so has part: feature:5377304-5377471:-1:exon
so has part: feature:5373496-5373588:-1:exon
so has part: feature:5372696-5372821:-1:exon
so has part: feature:5369444-5369577:-1:exon
so has part: feature:5364179-5364205:-1:exon

XP_036060736.1
type: Protein
SIO_000068: ncbiprotein

position:5364179:-1
position: 5364179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5431869:-1
position: 5431869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5431801-5431869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5428450-5428526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5419253-5419337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5391246-5391399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5386781-5387002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5377304-5377471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5373496-5373588:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5372696-5372821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5369444-5369577:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5364179-5364205:-1:exon

Ss18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ss18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SSXT isoform X3
translation: MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMPMGPGGMSQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPSQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQMPPYRPPQQGPPQQFSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQQYPGQQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRAAQPGPPQPPQQRPYGYDQGQYGNYQQ
SIO_010081: Ss18
subclass of: SO_0000673
so part of: Ss18
location: complement(join(5364179..5364205,5369444..5369577,5372696..5372821,5376543..5376647,5377304..5377471,5386781..5387002,5391246..5391399,5419253..5419337,5428450..5428526,5431801..5431869))
location: region:5364179-5431869:-1
so has part: feature:5431801-5431869:-1:exon
so has part: feature:5428450-5428526:-1:exon
so has part: feature:5419253-5419337:-1:exon
so has part: feature:5391246-5391399:-1:exon
so has part: feature:5386781-5387002:-1:exon
so has part: feature:5377304-5377471:-1:exon
so has part: feature:5376543-5376647:-1:exon
so has part: feature:5372696-5372821:-1:exon
so has part: feature:5369444-5369577:-1:exon
so has part: feature:5364179-5364205:-1:exon

XP_036060737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5431801-5431869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5428450-5428526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5419253-5419337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5391246-5391399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5386781-5387002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5377304-5377471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5376543-5376647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5372696-5372821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5369444-5369577:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5364179-5364205:-1:exon

Ss18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Ss18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SSXT isoform X1
translation: MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMPMGPGGMSQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPSQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQMPPYRPPQQGPPQQFSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQQYPGQQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRAAQPGPPQPPQQRPYGYDQGQYGNYQQ
SIO_010081: Ss18
subclass of: SO_0000673
so part of: Ss18
location: complement(join(5364179..5364205,5369444..5369577,5372696..5372821,5373496..5373588,5376543..5376647,5377304..5377471,5386781..5387002,5391246..5391399,5419253..5419337,5428450..5428526,5431801..5431869))
location: region:5364179-5431869:-1
so has part: feature:5431801-5431869:-1:exon
so has part: feature:5428450-5428526:-1:exon
so has part: feature:5419253-5419337:-1:exon
so has part: feature:5391246-5391399:-1:exon
so has part: feature:5386781-5387002:-1:exon
so has part: feature:5377304-5377471:-1:exon
so has part: feature:5376543-5376647:-1:exon
so has part: feature:5373496-5373588:-1:exon
so has part: feature:5372696-5372821:-1:exon
so has part: feature:5369444-5369577:-1:exon
so has part: feature:5364179-5364205:-1:exon

XP_036060735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5431801-5431869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5428450-5428526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5419253-5419337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5391246-5391399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5386781-5387002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5377304-5377471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5376543-5376647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5373496-5373588:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5372696-5372821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5369444-5369577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5364179-5364205:-1:exon

Psma8
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Psma8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5461709..5518259
location: region:5461709-5518259:1
so has part: feature:5461709-5518259:1:exon
subclass of: SO_0000010

118594830
type: Gene
SIO_000068: ncbigene

position:5461709:1
position: 5461709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5518259:1
position: 5518259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5461709-5518259:1:exon

Psma8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Psma8
product: proteasome 20S subunit alpha 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_036205038.1
SIO_010081: Psma8
subclass of: SO_0000673
so part of: Psma8
location: join(5461709..5461810,5477675..5477801,5482055..5482059,5486428..5486577,5490736..5490858,5514287..5514406,5514624..5514686,5518167..5518259)
location: region:5461709-5518259:1
so has part: feature:5461709-5461810:1:exon
so has part: feature:5477675-5477801:1:exon
so has part: feature:5482055-5482059:1:exon
so has part: feature:5486428-5486577:1:exon
so has part: feature:5490736-5490858:1:exon
so has part: feature:5514287-5514406:1:exon
so has part: feature:5514624-5514686:1:exon
so has part: feature:5518167-5518259:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5461709-5461810:1:exon

position:5461810:1
position: 5461810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5477675-5477801:1:exon

position:5477675:1
position: 5477675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5477801:1
position: 5477801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5482055-5482059:1:exon

position:5482055:1
position: 5482055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5482059:1
position: 5482059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5486428-5486577:1:exon

position:5486428:1
position: 5486428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5486577:1
position: 5486577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5490736-5490858:1:exon

position:5490736:1
position: 5490736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5490858:1
position: 5490858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5514287-5514406:1:exon

position:5514287:1
position: 5514287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5514406:1
position: 5514406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5514624-5514686:1:exon

position:5514624:1
position: 5514624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5514686:1
position: 5514686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5518167-5518259:1:exon

position:5518167:1
position: 5518167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Psma8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Psma8
product: proteasome 20S subunit alpha 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins
transcript id: XM_036205037.1
SIO_010081: Psma8
subclass of: SO_0000673
so part of: Psma8
location: join(5461709..5461810,5477675..5477801,5486453..5486577,5490736..5490858,5514287..5514406,5514624..5514686,5518167..5518259)
location: region:5461709-5518259:1
so has part: feature:5461709-5461810:1:exon
so has part: feature:5477675-5477801:1:exon
so has part: feature:5486453-5486577:1:exon
so has part: feature:5490736-5490858:1:exon
so has part: feature:5514287-5514406:1:exon
so has part: feature:5514624-5514686:1:exon
so has part: feature:5518167-5518259:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5461709-5461810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5477675-5477801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5486453-5486577:1:exon

position:5486453:1
position: 5486453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5490736-5490858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5514287-5514406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5514624-5514686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5518167-5518259:1:exon

Psma8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Psma8
product: proteasome 20S subunit alpha 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_036205039.1
SIO_010081: Psma8
subclass of: SO_0000673
so part of: Psma8
location: join(5461709..5461810,5477675..5477801,5486453..5486577,5490736..5490858,5514624..5514686,5518167..5518259)
location: region:5461709-5518259:1
so has part: feature:5461709-5461810:1:exon
so has part: feature:5477675-5477801:1:exon
so has part: feature:5486453-5486577:1:exon
so has part: feature:5490736-5490858:1:exon
so has part: feature:5514624-5514686:1:exon
so has part: feature:5518167-5518259:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5461709-5461810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5477675-5477801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5486453-5486577:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5490736-5490858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5514624-5514686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5518167-5518259:1:exon

Psma8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Psma8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit alpha-type 8 isoform X2
translation: MASRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAVLTLRNACFTGLTADARVVIHRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDNEAIKLAIKALLEVVQSGGKNIELAIIRRDQPLKMFSAKEIELQVTEIEKEKEEAEKKKSKKAT
SIO_010081: Psma8
subclass of: SO_0000673
so part of: Psma8
location: join(5461709..5461810,5477675..5477801,5482055..5482059,5486428..5486577,5490736..5490858,5514287..5514406,5514624..5514686,5518167..5518259)
location: region:5461709-5518259:1
so has part: feature:5461709-5461810:1:exon
so has part: feature:5477675-5477801:1:exon
so has part: feature:5482055-5482059:1:exon
so has part: feature:5486428-5486577:1:exon
so has part: feature:5490736-5490858:1:exon
so has part: feature:5514287-5514406:1:exon
so has part: feature:5514624-5514686:1:exon
so has part: feature:5518167-5518259:1:exon

XP_036060931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5461709-5461810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5477675-5477801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5482055-5482059:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5486428-5486577:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5490736-5490858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5514287-5514406:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5514624-5514686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5518167-5518259:1:exon

Psma8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Psma8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit alpha-type 8 isoform X1
translation: MASRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVIHRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDNEAIKLAIKALLEVVQSGGKNIELAIIRRDQPLKMFSAKEIELQVTEIEKEKEEAEKKKSKKAT
SIO_010081: Psma8
subclass of: SO_0000673
so part of: Psma8
location: join(5461709..5461810,5477675..5477801,5486453..5486577,5490736..5490858,5514287..5514406,5514624..5514686,5518167..5518259)
location: region:5461709-5518259:1
so has part: feature:5461709-5461810:1:exon
so has part: feature:5477675-5477801:1:exon
so has part: feature:5486453-5486577:1:exon
so has part: feature:5490736-5490858:1:exon
so has part: feature:5514287-5514406:1:exon
so has part: feature:5514624-5514686:1:exon
so has part: feature:5518167-5518259:1:exon

XP_036060930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5461709-5461810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5477675-5477801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5486453-5486577:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5490736-5490858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5514287-5514406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5514624-5514686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5518167-5518259:1:exon

Psma8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Psma8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit alpha-type 8 isoform X3
translation: MASRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVIHRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKVVQSGGKNIELAIIRRDQPLKMFSAKEIELQVTEIEKEKEEAEKKKSKKAT
SIO_010081: Psma8
subclass of: SO_0000673
so part of: Psma8
location: join(5461709..5461810,5477675..5477801,5486453..5486577,5490736..5490858,5514624..5514686,5518167..5518259)
location: region:5461709-5518259:1
so has part: feature:5461709-5461810:1:exon
so has part: feature:5477675-5477801:1:exon
so has part: feature:5486453-5486577:1:exon
so has part: feature:5490736-5490858:1:exon
so has part: feature:5514624-5514686:1:exon
so has part: feature:5518167-5518259:1:exon

XP_036060932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5461709-5461810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5477675-5477801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5486453-5486577:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5490736-5490858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5514624-5514686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5518167-5518259:1:exon

LOC118594832
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5501791..5536261)
location: region:5501791-5536261:-1
so has part: feature:5501791-5536261:-1:exon
subclass of: SO_0000011

118594832
type: Gene
SIO_000068: ncbigene

position:5501791:-1
position: 5501791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5536261:-1
position: 5536261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5501791-5536261:-1:exon

LOC118594832
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: lncRNA
gene: LOC118594832
product: uncharacterized LOC118594832
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004946416.1
SIO_010081: LOC118594832
subclass of: SO_0000673
so part of: LOC118594832
location: complement(join(5501791..5501823,5525428..5525520,5536147..5536261))
location: region:5501791-5536261:-1
so has part: feature:5536147-5536261:-1:exon
so has part: feature:5525428-5525520:-1:exon
so has part: feature:5501791-5501823:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5536147-5536261:-1:exon

position:5536147:-1
position: 5536147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5525428-5525520:-1:exon

position:5525428:-1
position: 5525428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5525520:-1
position: 5525520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5501791-5501823:-1:exon

position:5501823:-1
position: 5501823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118594831
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5537850..5545380)
location: region:5537850-5545380:-1
so has part: feature:5537850-5545380:-1:exon
subclass of: SO_0000011

118594831
type: Gene
SIO_000068: ncbigene

position:5537850:-1
position: 5537850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5545380:-1
position: 5545380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5537850-5545380:-1:exon

LOC118594831
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: lncRNA
gene: LOC118594831
product: uncharacterized LOC118594831
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004946415.1
SIO_010081: LOC118594831
subclass of: SO_0000673
so part of: LOC118594831
location: complement(join(5537850..5537876,5542577..5542761,5545183..5545380))
location: region:5537850-5545380:-1
so has part: feature:5545183-5545380:-1:exon
so has part: feature:5542577-5542761:-1:exon
so has part: feature:5537850-5537876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5545183-5545380:-1:exon

position:5545183:-1
position: 5545183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5542577-5542761:-1:exon

position:5542577:-1
position: 5542577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5542761:-1
position: 5542761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5537850-5537876:-1:exon

position:5537876:-1
position: 5537876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Taf4b
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Taf4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5545531..5664131
location: region:5545531-5664131:1
so has part: feature:5545531-5664131:1:exon
subclass of: SO_0000010

118595030
type: Gene
SIO_000068: ncbigene

position:5545531:1
position: 5545531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5664131:1
position: 5664131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5545531-5664131:1:exon

Taf4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Taf4b
product: TATA-box binding protein associated factor 4b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_036205292.1
SIO_010081: Taf4b
subclass of: SO_0000673
so part of: Taf4b
location: join(5545531..5546262,5559040..5559188,5561857..5561964,5564269..5564409,5564497..5564619,5566582..5566671,5574061..5574645,5585005..5585122,5585635..5585746,5603101..5603270,5607466..5607596,5612953..5613078,5618806..5618862,5630919..5631023,5663799..5664131)
location: region:5545531-5664131:1
so has part: feature:5545531-5546262:1:exon
so has part: feature:5559040-5559188:1:exon
so has part: feature:5561857-5561964:1:exon
so has part: feature:5564269-5564409:1:exon
so has part: feature:5564497-5564619:1:exon
so has part: feature:5566582-5566671:1:exon
so has part: feature:5574061-5574645:1:exon
so has part: feature:5585005-5585122:1:exon
so has part: feature:5585635-5585746:1:exon
so has part: feature:5603101-5603270:1:exon
so has part: feature:5607466-5607596:1:exon
so has part: feature:5612953-5613078:1:exon
so has part: feature:5618806-5618862:1:exon
so has part: feature:5630919-5631023:1:exon
so has part: feature:5663799-5664131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5545531-5546262:1:exon

position:5546262:1
position: 5546262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5559040-5559188:1:exon

position:5559040:1
position: 5559040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5559188:1
position: 5559188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5561857-5561964:1:exon

position:5561857:1
position: 5561857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5561964:1
position: 5561964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5564269-5564409:1:exon

position:5564269:1
position: 5564269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5564409:1
position: 5564409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5564497-5564619:1:exon

position:5564497:1
position: 5564497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5564619:1
position: 5564619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5566582-5566671:1:exon

position:5566582:1
position: 5566582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5566671:1
position: 5566671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5574061-5574645:1:exon

position:5574061:1
position: 5574061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5574645:1
position: 5574645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5585005-5585122:1:exon

position:5585005:1
position: 5585005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5585122:1
position: 5585122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5585635-5585746:1:exon

position:5585635:1
position: 5585635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5585746:1
position: 5585746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5603101-5603270:1:exon

position:5603101:1
position: 5603101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5603270:1
position: 5603270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5607466-5607596:1:exon

position:5607466:1
position: 5607466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5607596:1
position: 5607596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5612953-5613078:1:exon

position:5612953:1
position: 5612953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5613078:1
position: 5613078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5618806-5618862:1:exon

position:5618806:1
position: 5618806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5618862:1
position: 5618862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5630919-5631023:1:exon

position:5630919:1
position: 5630919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5631023:1
position: 5631023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5663799-5664131:1:exon

position:5663799:1
position: 5663799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Taf4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Taf4b
product: TATA-box binding protein associated factor 4b, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036205294.1
SIO_010081: Taf4b
subclass of: SO_0000673
so part of: Taf4b
location: join(5545531..5546262,5559040..5559188,5564269..5564409,5564497..5564619,5566582..5566671,5574061..5574645,5585005..5585122,5585635..5585746,5603101..5603270,5607466..5607596,5612953..5613078,5618806..5618862,5630919..5631023,5663799..5664131)
location: region:5545531-5664131:1
so has part: feature:5545531-5546262:1:exon
so has part: feature:5559040-5559188:1:exon
so has part: feature:5564269-5564409:1:exon
so has part: feature:5564497-5564619:1:exon
so has part: feature:5566582-5566671:1:exon
so has part: feature:5574061-5574645:1:exon
so has part: feature:5585005-5585122:1:exon
so has part: feature:5585635-5585746:1:exon
so has part: feature:5603101-5603270:1:exon
so has part: feature:5607466-5607596:1:exon
so has part: feature:5612953-5613078:1:exon
so has part: feature:5618806-5618862:1:exon
so has part: feature:5630919-5631023:1:exon
so has part: feature:5663799-5664131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5545531-5546262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5559040-5559188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5564269-5564409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5564497-5564619:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5566582-5566671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5574061-5574645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5585005-5585122:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5585635-5585746:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5603101-5603270:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5607466-5607596:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5612953-5613078:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5618806-5618862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5630919-5631023:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5663799-5664131:1:exon

Taf4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Taf4b
product: TATA-box binding protein associated factor 4b, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_036205296.1
SIO_010081: Taf4b
subclass of: SO_0000673
so part of: Taf4b
location: join(5545531..5546262,5559040..5559188,5561857..5561964,5564269..5564409,5564497..5564619,5566582..5566671,5574061..5574645,5585005..5585122,5585635..5585746,5603101..5603270,5607466..5607596,5612953..5613078,5618806..5618862,5630919..5631023,5663809..5663899)
location: region:5545531-5663899:1
so has part: feature:5545531-5546262:1:exon
so has part: feature:5559040-5559188:1:exon
so has part: feature:5561857-5561964:1:exon
so has part: feature:5564269-5564409:1:exon
so has part: feature:5564497-5564619:1:exon
so has part: feature:5566582-5566671:1:exon
so has part: feature:5574061-5574645:1:exon
so has part: feature:5585005-5585122:1:exon
so has part: feature:5585635-5585746:1:exon
so has part: feature:5603101-5603270:1:exon
so has part: feature:5607466-5607596:1:exon
so has part: feature:5612953-5613078:1:exon
so has part: feature:5618806-5618862:1:exon
so has part: feature:5630919-5631023:1:exon
so has part: feature:5663809-5663899:1:exon

position:5663899:1
position: 5663899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5545531-5546262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5559040-5559188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5561857-5561964:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5564269-5564409:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5564497-5564619:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5566582-5566671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5574061-5574645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5585005-5585122:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5585635-5585746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5603101-5603270:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5607466-5607596:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5612953-5613078:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5618806-5618862:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5630919-5631023:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5663809-5663899:1:exon

position:5663809:1
position: 5663809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Taf4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Taf4b
product: TATA-box binding protein associated factor 4b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036205293.1
SIO_010081: Taf4b
subclass of: SO_0000673
so part of: Taf4b
location: join(5545531..5546262,5559040..5559188,5561857..5561964,5564269..5564409,5564497..5564619,5566582..5566671,5574061..5574645,5585005..5585122,5585635..5585746,5603101..5603270,5607466..5607596,5612953..5613078,5618806..5618862,5630919..5631023,5645906..5645993,5663799..5663876)
location: region:5545531-5663876:1
so has part: feature:5545531-5546262:1:exon
so has part: feature:5559040-5559188:1:exon
so has part: feature:5561857-5561964:1:exon
so has part: feature:5564269-5564409:1:exon
so has part: feature:5564497-5564619:1:exon
so has part: feature:5566582-5566671:1:exon
so has part: feature:5574061-5574645:1:exon
so has part: feature:5585005-5585122:1:exon
so has part: feature:5585635-5585746:1:exon
so has part: feature:5603101-5603270:1:exon
so has part: feature:5607466-5607596:1:exon
so has part: feature:5612953-5613078:1:exon
so has part: feature:5618806-5618862:1:exon
so has part: feature:5630919-5631023:1:exon
so has part: feature:5645906-5645993:1:exon
so has part: feature:5663799-5663876:1:exon

position:5663876:1
position: 5663876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5545531-5546262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5559040-5559188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5561857-5561964:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5564269-5564409:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5564497-5564619:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5566582-5566671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5574061-5574645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5585005-5585122:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5585635-5585746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5603101-5603270:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5607466-5607596:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5612953-5613078:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5618806-5618862:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5630919-5631023:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5645906-5645993:1:exon

position:5645906:1
position: 5645906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5645993:1
position: 5645993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5663799-5663876:1:exon

Taf4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Taf4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 4B isoform X1
translation: MPAGLTEPAGAAAPGVASASGAVTMASAATLPVRVESTPVALGPVTKAPVSVCVEPVAPQPLPSPVGTLVTKVVPVTALPKLSGPRLPAPQIVTVKTPGTTTIQLPANLQLPPGTVLIRSNSGQLMLVSPQQAVTGAKTTNNVVTPRPAVPVNTPTVKICTVPNSSSQLMKKVAVTPVNSLTQAGSTVATTAPGASSGQSVAVPPVKPVNTVTILKPSSLGAVSTPSNEASLKAETSVAAQTSLSPTVLENVKKCKNFLSMLIKLACSGSQSPDMGQNVKKLVEQLLDAEIEAEEFTRKLYIELKSAPQPHLVPFLKKSVVALRQLLPSSQSFIENCVQEVSGEVVIASCSTTATASPVVTSTISPVLVSGATAPRTLSIQTSNPLSGPGGANAVAGTLHSVVPAAVAGGPPATVLLQTSKPLTTSVPNALSAVSLQPEKPVVSGAAATLALPPVTFGETSAAHAPLCLPSVKPAITSAGTQPDKPSIGAPVQIRLAQPGPLLPQAVKVKQLVVQQPSGGNASQVTTISYSSPLTTQKCGPKMPVNAVVPTTSIIKQITLPGNKLLSLQAQTSSIQNNKIKENGAACFRGEDDINDVTCMAEVNLDEENACILATHSEFVGTLIQSCKEEPFLFIGALQKRILDIGKKHDITELNSDAVNLISHATQERLRGLLEKLTTIAQHRMTVYKGSENYILSTDTRSQLKFLEKLDQLEKQRKDLEEREMLLRAAKSRSNKEDPEQLRLKQKARELQQLELAQIQYRDANLTALAAIGPRKKRPLESGNEGFKDNPSASGTSSLTATKPLLRPRITRICLRDLIFCMEQEREMKYSRALYLALLK
SIO_010081: Taf4b
subclass of: SO_0000673
so part of: Taf4b
location: join(5545923..5546262,5559040..5559188,5561857..5561964,5564269..5564409,5564497..5564619,5566582..5566671,5574061..5574645,5585005..5585122,5585635..5585746,5603101..5603270,5607466..5607596,5612953..5613078,5618806..5618862,5630919..5631023,5663799..5663966)
location: region:5545923-5663966:1
so has part: feature:5545923-5546262:1:exon
so has part: feature:5559040-5559188:1:exon
so has part: feature:5561857-5561964:1:exon
so has part: feature:5564269-5564409:1:exon
so has part: feature:5564497-5564619:1:exon
so has part: feature:5566582-5566671:1:exon
so has part: feature:5574061-5574645:1:exon
so has part: feature:5585005-5585122:1:exon
so has part: feature:5585635-5585746:1:exon
so has part: feature:5603101-5603270:1:exon
so has part: feature:5607466-5607596:1:exon
so has part: feature:5612953-5613078:1:exon
so has part: feature:5618806-5618862:1:exon
so has part: feature:5630919-5631023:1:exon
so has part: feature:5663799-5663966:1:exon

XP_036061185.1
type: Protein
SIO_000068: ncbiprotein

position:5545923:1
position: 5545923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5663966:1
position: 5663966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5545923-5546262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5559040-5559188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5561857-5561964:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5564269-5564409:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5564497-5564619:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5566582-5566671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5574061-5574645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5585005-5585122:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5585635-5585746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5603101-5603270:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5607466-5607596:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5612953-5613078:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5618806-5618862:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5630919-5631023:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5663799-5663966:1:exon

Taf4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Taf4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 4B isoform X3
translation: MPAGLTEPAGAAAPGVASASGAVTMASAATLPVRVESTPVALGPVTKAPVSVCVEPVAPQPLPSPVGTLVTKVVPVTALPKLSGPRLPAPQIVTVKTPGTTTIQLPANLQLPPGTVLIRSNSGQLMLVSPQQAVTGAKTTNNVVTPRPAVPVNTPTVKICTVPSVAVPPVKPVNTVTILKPSSLGAVSTPSNEASLKAETSVAAQTSLSPTVLENVKKCKNFLSMLIKLACSGSQSPDMGQNVKKLVEQLLDAEIEAEEFTRKLYIELKSAPQPHLVPFLKKSVVALRQLLPSSQSFIENCVQEVSGEVVIASCSTTATASPVVTSTISPVLVSGATAPRTLSIQTSNPLSGPGGANAVAGTLHSVVPAAVAGGPPATVLLQTSKPLTTSVPNALSAVSLQPEKPVVSGAAATLALPPVTFGETSAAHAPLCLPSVKPAITSAGTQPDKPSIGAPVQIRLAQPGPLLPQAVKVKQLVVQQPSGGNASQVTTISYSSPLTTQKCGPKMPVNAVVPTTSIIKQITLPGNKLLSLQAQTSSIQNNKIKENGAACFRGEDDINDVTCMAEVNLDEENACILATHSEFVGTLIQSCKEEPFLFIGALQKRILDIGKKHDITELNSDAVNLISHATQERLRGLLEKLTTIAQHRMTVYKGSENYILSTDTRSQLKFLEKLDQLEKQRKDLEEREMLLRAAKSRSNKEDPEQLRLKQKARELQQLELAQIQYRDANLTALAAIGPRKKRPLESGNEGFKDNPSASGTSSLTATKPLLRPRITRICLRDLIFCMEQEREMKYSRALYLALLK
SIO_010081: Taf4b
subclass of: SO_0000673
so part of: Taf4b
location: join(5545923..5546262,5559040..5559188,5564269..5564409,5564497..5564619,5566582..5566671,5574061..5574645,5585005..5585122,5585635..5585746,5603101..5603270,5607466..5607596,5612953..5613078,5618806..5618862,5630919..5631023,5663799..5663966)
location: region:5545923-5663966:1
so has part: feature:5545923-5546262:1:exon
so has part: feature:5559040-5559188:1:exon
so has part: feature:5564269-5564409:1:exon
so has part: feature:5564497-5564619:1:exon
so has part: feature:5566582-5566671:1:exon
so has part: feature:5574061-5574645:1:exon
so has part: feature:5585005-5585122:1:exon
so has part: feature:5585635-5585746:1:exon
so has part: feature:5603101-5603270:1:exon
so has part: feature:5607466-5607596:1:exon
so has part: feature:5612953-5613078:1:exon
so has part: feature:5618806-5618862:1:exon
so has part: feature:5630919-5631023:1:exon
so has part: feature:5663799-5663966:1:exon

XP_036061187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5545923-5546262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5559040-5559188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5564269-5564409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5564497-5564619:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5566582-5566671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5574061-5574645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5585005-5585122:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5585635-5585746:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5603101-5603270:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5607466-5607596:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5612953-5613078:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5618806-5618862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5630919-5631023:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5663799-5663966:1:exon

Taf4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Taf4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 4B isoform X4
translation: MPAGLTEPAGAAAPGVASASGAVTMASAATLPVRVESTPVALGPVTKAPVSVCVEPVAPQPLPSPVGTLVTKVVPVTALPKLSGPRLPAPQIVTVKTPGTTTIQLPANLQLPPGTVLIRSNSGQLMLVSPQQAVTGAKTTNNVVTPRPAVPVNTPTVKICTVPNSSSQLMKKVAVTPVNSLTQAGSTVATTAPGASSGQSVAVPPVKPVNTVTILKPSSLGAVSTPSNEASLKAETSVAAQTSLSPTVLENVKKCKNFLSMLIKLACSGSQSPDMGQNVKKLVEQLLDAEIEAEEFTRKLYIELKSAPQPHLVPFLKKSVVALRQLLPSSQSFIENCVQEVSGEVVIASCSTTATASPVVTSTISPVLVSGATAPRTLSIQTSNPLSGPGGANAVAGTLHSVVPAAVAGGPPATVLLQTSKPLTTSVPNALSAVSLQPEKPVVSGAAATLALPPVTFGETSAAHAPLCLPSVKPAITSAGTQPDKPSIGAPVQIRLAQPGPLLPQAVKVKQLVVQQPSGGNASQVTTISYSSPLTTQKCGPKMPVNAVVPTTSIIKQITLPGNKLLSLQAQTSSIQNNKIKENGAACFRGEDDINDVTCMAEVNLDEENACILATHSEFVGTLIQSCKEEPFLFIGALQKRILDIGKKHDITELNSDAVNLISHATQERLRGLLEKLTTIAQHRMTVYKGSENYILSTDTRSQLKFLEKLDQLEKQRKDLEEREMLLRAAKSRSNKEDPEQLRLKQKARELQQLELAQIQYRDANLTALAAIGPRKKRPLESGNEITLLLLGHPA
SIO_010081: Taf4b
subclass of: SO_0000673
so part of: Taf4b
location: join(5545923..5546262,5559040..5559188,5561857..5561964,5564269..5564409,5564497..5564619,5566582..5566671,5574061..5574645,5585005..5585122,5585635..5585746,5603101..5603270,5607466..5607596,5612953..5613078,5618806..5618862,5630919..5631023,5663809..5663841)
location: region:5545923-5663841:1
so has part: feature:5545923-5546262:1:exon
so has part: feature:5559040-5559188:1:exon
so has part: feature:5561857-5561964:1:exon
so has part: feature:5564269-5564409:1:exon
so has part: feature:5564497-5564619:1:exon
so has part: feature:5566582-5566671:1:exon
so has part: feature:5574061-5574645:1:exon
so has part: feature:5585005-5585122:1:exon
so has part: feature:5585635-5585746:1:exon
so has part: feature:5603101-5603270:1:exon
so has part: feature:5607466-5607596:1:exon
so has part: feature:5612953-5613078:1:exon
so has part: feature:5618806-5618862:1:exon
so has part: feature:5630919-5631023:1:exon
so has part: feature:5663809-5663841:1:exon

XP_036061189.1
type: Protein
SIO_000068: ncbiprotein

position:5663841:1
position: 5663841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5545923-5546262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5559040-5559188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5561857-5561964:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5564269-5564409:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5564497-5564619:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5566582-5566671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5574061-5574645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5585005-5585122:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5585635-5585746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5603101-5603270:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5607466-5607596:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5612953-5613078:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5618806-5618862:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5630919-5631023:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5663809-5663841:1:exon

Taf4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Taf4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 4B isoform X2
translation: MPAGLTEPAGAAAPGVASASGAVTMASAATLPVRVESTPVALGPVTKAPVSVCVEPVAPQPLPSPVGTLVTKVVPVTALPKLSGPRLPAPQIVTVKTPGTTTIQLPANLQLPPGTVLIRSNSGQLMLVSPQQAVTGAKTTNNVVTPRPAVPVNTPTVKICTVPNSSSQLMKKVAVTPVNSLTQAGSTVATTAPGASSGQSVAVPPVKPVNTVTILKPSSLGAVSTPSNEASLKAETSVAAQTSLSPTVLENVKKCKNFLSMLIKLACSGSQSPDMGQNVKKLVEQLLDAEIEAEEFTRKLYIELKSAPQPHLVPFLKKSVVALRQLLPSSQSFIENCVQEVSGEVVIASCSTTATASPVVTSTISPVLVSGATAPRTLSIQTSNPLSGPGGANAVAGTLHSVVPAAVAGGPPATVLLQTSKPLTTSVPNALSAVSLQPEKPVVSGAAATLALPPVTFGETSAAHAPLCLPSVKPAITSAGTQPDKPSIGAPVQIRLAQPGPLLPQAVKVKQLVVQQPSGGNASQVTTISYSSPLTTQKCGPKMPVNAVVPTTSIIKQITLPGNKLLSLQAQTSSIQNNKIKENGAACFRGEDDINDVTCMAEVNLDEENACILATHSEFVGTLIQSCKEEPFLFIGALQKRILDIGKKHDITELNSDAVNLISHATQERLRGLLEKLTTIAQHRMTVYKGSENYILSTDTRSQLKFLEKLDQLEKQRKDLEEREMLLRAAKSRSNKEDPEQLRLKQKARELQQLELAQIQYRDANLTALAAIGPRKKRPLESGNEGPLIPEGRKLVETFRLGLNVPRSYTLRIGWLQR
SIO_010081: Taf4b
subclass of: SO_0000673
so part of: Taf4b
location: join(5545923..5546262,5559040..5559188,5561857..5561964,5564269..5564409,5564497..5564619,5566582..5566671,5574061..5574645,5585005..5585122,5585635..5585746,5603101..5603270,5607466..5607596,5612953..5613078,5618806..5618862,5630919..5631023,5645906..5645993,5663799..5663812)
location: region:5545923-5663812:1
so has part: feature:5545923-5546262:1:exon
so has part: feature:5559040-5559188:1:exon
so has part: feature:5561857-5561964:1:exon
so has part: feature:5564269-5564409:1:exon
so has part: feature:5564497-5564619:1:exon
so has part: feature:5566582-5566671:1:exon
so has part: feature:5574061-5574645:1:exon
so has part: feature:5585005-5585122:1:exon
so has part: feature:5585635-5585746:1:exon
so has part: feature:5603101-5603270:1:exon
so has part: feature:5607466-5607596:1:exon
so has part: feature:5612953-5613078:1:exon
so has part: feature:5618806-5618862:1:exon
so has part: feature:5630919-5631023:1:exon
so has part: feature:5645906-5645993:1:exon
so has part: feature:5663799-5663812:1:exon

XP_036061186.1
type: Protein
SIO_000068: ncbiprotein

position:5663812:1
position: 5663812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5545923-5546262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5559040-5559188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5561857-5561964:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5564269-5564409:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5564497-5564619:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5566582-5566671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5574061-5574645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5585005-5585122:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5585635-5585746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5603101-5603270:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5607466-5607596:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5612953-5613078:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5618806-5618862:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5630919-5631023:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5645906-5645993:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5663799-5663812:1:exon

LOC118594920
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5579400..5584023)
location: region:5579400-5584023:-1
so has part: feature:5579400-5584023:-1:exon

118594920
type: Gene
SIO_000068: ncbigene

position:5579400:-1
position: 5579400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5584023:-1
position: 5584023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5579400-5584023:-1:exon

LOC118594920
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118594920
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC118594920
subclass of: SO_0000673
so part of: LOC118594920
location: complement(5579400..5580057)
location: region:5579400-5580057:-1
so has part: feature:5579400-5580057:-1:exon

position:5580057:-1
position: 5580057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5579400-5580057:-1:exon

LOC118594920
type: Exon
subclass of: SO_0000147
RO_0002162: 38674
gene: LOC118594920
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC118594920
subclass of: SO_0000673
so part of: LOC118594920
location: complement(5584002..5584023)
location: region:5584002-5584023:-1
so has part: feature:5584002-5584023:-1:exon

position:5584002:-1
position: 5584002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5584002-5584023:-1:exon

Kctd1
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Kctd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5743824..5847566)
location: region:5743824-5847566:-1
so has part: feature:5743824-5847566:-1:exon
subclass of: SO_0000010

118594631
type: Gene
SIO_000068: ncbigene

position:5743824:-1
position: 5743824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5847566:-1
position: 5847566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5743824-5847566:-1:exon

Kctd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Kctd1
product: potassium channel tetramerization domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036204643.1
SIO_010081: Kctd1
subclass of: SO_0000673
so part of: Kctd1
location: complement(join(5743824..5744409,5749045..5749350,5766355..5766499,5793411..5793589,5846901..5847566))
location: region:5743824-5847566:-1
so has part: feature:5846901-5847566:-1:exon
so has part: feature:5793411-5793589:-1:exon
so has part: feature:5766355-5766499:-1:exon
so has part: feature:5749045-5749350:-1:exon
so has part: feature:5743824-5744409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5846901-5847566:-1:exon

position:5846901:-1
position: 5846901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5793411-5793589:-1:exon

position:5793411:-1
position: 5793411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5793589:-1
position: 5793589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5766355-5766499:-1:exon

position:5766355:-1
position: 5766355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5766499:-1
position: 5766499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5749045-5749350:-1:exon

position:5749045:-1
position: 5749045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5749350:-1
position: 5749350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5743824-5744409:-1:exon

position:5744409:-1
position: 5744409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Kctd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Kctd1
product: potassium channel tetramerization domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036204642.1
SIO_010081: Kctd1
subclass of: SO_0000673
so part of: Kctd1
location: complement(join(5743824..5744409,5749045..5749350,5766355..5766499,5793411..5793589,5844763..5846874))
location: region:5743824-5846874:-1
so has part: feature:5844763-5846874:-1:exon
so has part: feature:5793411-5793589:-1:exon
so has part: feature:5766355-5766499:-1:exon
so has part: feature:5749045-5749350:-1:exon
so has part: feature:5743824-5744409:-1:exon

position:5846874:-1
position: 5846874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5844763-5846874:-1:exon

position:5844763:-1
position: 5844763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5793411-5793589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5766355-5766499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5749045-5749350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5743824-5744409:-1:exon

Kctd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Kctd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD1 isoform X1
translation: MARMPGSGDCNTSAGGSAAAAAENNGERGEGERGAGGRGRLHGRPHYCSAGEEEEEEEEEDEIQEVQITGDEEEDGGGGLEDEEEEEEEEEMGMDWEEPLEPEDSAGEELEPEPVHMIHMDQSAALEPEAPPRLLAPRARAGPPGDSAELDPDVLQRPERARLSENTRLATRYAVRIFREYLSEKAQSPDFETMDKGALCRVLRSFYAEARSKSGQLYSKSSLISIRSSLNRYLNEPPYCRTLDLTKDPELRSANLTLAAVIRKLEEQGAGPVVQKQAITRADLRKLYTSSVFSTNTPFGLLNKVWFETCMYFCTRGRENQRELEEDSFGLAMDEDGRKFVYFKSLGPYHKSRSSSWSKKRAESSDEENLPRMYETGTEFCPYASFVKYLSKRNPLCKAFFQRPRDHCSEGDVTWYENKAIGKNLLGTRMQMLSKAAKLSKTYTNHCIGAVSIATLNSIAGIGTKLGSPAPQGCYTEALNGSARHHSHHPPTHPSHHHRSQPPSLGNTYILPKDSQVGPDVKSEAAPKRALYESVFGSGEICGPSSPKRLCIRPSSEPVDAVVVVSVKHDPLPLLPEVNGHRSSNSPTIVSPAIVSPTQDSRPNMSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVNAGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELRRTPRVPSVIRIKQEPLD
SIO_010081: Kctd1
subclass of: SO_0000673
so part of: Kctd1
location: complement(join(5744251..5744409,5749045..5749350,5766355..5766499,5793411..5793589,5844763..5846559))
location: region:5744251-5846559:-1
so has part: feature:5844763-5846559:-1:exon
so has part: feature:5793411-5793589:-1:exon
so has part: feature:5766355-5766499:-1:exon
so has part: feature:5749045-5749350:-1:exon
so has part: feature:5744251-5744409:-1:exon

XP_036060535.1
type: Protein
SIO_000068: ncbiprotein

position:5744251:-1
position: 5744251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5846559:-1
position: 5846559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5844763-5846559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5793411-5793589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5766355-5766499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5749045-5749350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5744251-5744409:-1:exon

Kctd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 38674
gene: Kctd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD1 isoform X2
translation: MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVNAGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELRRTPRVPSVIRIKQEPLD
SIO_010081: Kctd1
subclass of: SO_0000673
so part of: Kctd1
location: complement(join(5744251..5744409,5749045..5749350,5766355..5766499,5793411..5793574))
location: region:5744251-5793574:-1
so has part: feature:5793411-5793574:-1:exon
so has part: feature:5766355-5766499:-1:exon
so has part: feature:5749045-5749350:-1:exon
so has part: feature:5744251-5744409:-1:exon

XP_036060536.1
type: Protein
SIO_000068: ncbiprotein

position:5793574:-1
position: 5793574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5793411-5793574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5766355-5766499:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5749045-5749350:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5744251-5744409:-1:exon

LOC118594432
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5978833..5984108)
location: region:5978833-5984108:-1
so has part: feature:5978833-5984108:-1:exon
subclass of: SO_0000011

118594432
type: Gene
SIO_000068: ncbigene

position:5978833:-1
position: 5978833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5984108:-1
position: 5984108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5978833-5984108:-1:exon

LOC118594432
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: lncRNA
gene: LOC118594432
product: uncharacterized LOC118594432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004946384.1
SIO_010081: LOC118594432
subclass of: SO_0000673
so part of: LOC118594432
location: complement(join(5978833..5979519,5980767..5981184,5984050..5984108))
location: region:5978833-5984108:-1
so has part: feature:5984050-5984108:-1:exon
so has part: feature:5980767-5981184:-1:exon
so has part: feature:5978833-5979519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5984050-5984108:-1:exon

position:5984050:-1
position: 5984050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5980767-5981184:-1:exon

position:5980767:-1
position: 5980767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5981184:-1
position: 5981184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5978833-5979519:-1:exon

position:5979519:-1
position: 5979519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118594429
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: LOC118594429
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6113953..6120092
location: region:6113953-6120092:1
so has part: feature:6113953-6120092:1:exon
subclass of: SO_0000011

118594429
type: Gene
SIO_000068: ncbigene

position:6113953:1
position: 6113953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6120092:1
position: 6120092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6113953-6120092:1:exon

LOC118594429
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: lncRNA
gene: LOC118594429
product: uncharacterized LOC118594429, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004946383.1
SIO_010081: LOC118594429
subclass of: SO_0000673
so part of: LOC118594429
location: join(6113953..6114141,6116891..6117017,6117990..6118134,6118519..6120092)
location: region:6113953-6120092:1
so has part: feature:6113953-6114141:1:exon
so has part: feature:6116891-6117017:1:exon
so has part: feature:6117990-6118134:1:exon
so has part: feature:6118519-6120092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6113953-6114141:1:exon

position:6114141:1
position: 6114141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6116891-6117017:1:exon

position:6116891:1
position: 6116891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6117017:1
position: 6117017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6117990-6118134:1:exon

position:6117990:1
position: 6117990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6118134:1
position: 6118134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6118519-6120092:1:exon

position:6118519:1
position: 6118519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118594429
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 38674
nc RNA class: lncRNA
gene: LOC118594429
product: uncharacterized LOC118594429, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004946382.1
SIO_010081: LOC118594429
subclass of: SO_0000673
so part of: LOC118594429
location: join(6116393..6117017,6117990..6118134,6118519..6120092)
location: region:6116393-6120092:1
so has part: feature:6116393-6117017:1:exon
so has part: feature:6117990-6118134:1:exon
so has part: feature:6118519-6120092:1:exon

position:6116393:1
position: 6116393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6116393-6117017:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6117990-6118134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6118519-6120092:1:exon

Aqp4
type: Gene
subclass of: SO_0000704
RO_0002162: 38674
gene: Aqp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6139539..6153407)
location: region:6139539-6153407:-1
so has part: feature:6139539-6153407:-1:exon
subclass of: SO_0000010

118594892
type: Gene
SIO_000068: ncbigene

position:6139539:-1
position: 6139539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6153407:-1
position: 6153407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6139539-6153407:-1:exon

Aqp4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Aqp4
product: aquaporin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205144.1
SIO_010081: Aqp4
subclass of: SO_0000673
so part of: Aqp4
location: complement(join(6139539..6143885,6147581..6147661,6148159..6148323,6149555..6149969,6153297..6153407))
location: region:6139539-6153407:-1
so has part: feature:6153297-6153407:-1:exon
so has part: feature:6149555-6149969:-1:exon
so has part: feature:6148159-6148323:-1:exon
so has part: feature:6147581-6147661:-1:exon
so has part: feature:6139539-6143885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6153297-6153407:-1:exon

position:6153297:-1
position: 6153297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6149555-6149969:-1:exon

position:6149555:-1
position: 6149555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6149969:-1
position: 6149969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6148159-6148323:-1:exon

position:6148159:-1
position: 6148159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6148323:-1
position: 6148323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6147581-6147661:-1:exon

position:6147581:-1
position: 6147581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6147661:-1
position: 6147661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6139539-6143885:-1:exon

position:6143885:-1
position: 6143885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Aqp4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Aqp4
product: aquaporin 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205147.1
SIO_010081: Aqp4
subclass of: SO_0000673
so part of: Aqp4
location: complement(join(6139539..6143885,6147581..6147661,6148159..6148323,6149555..6149965,6153297..6153374))
location: region:6139539-6153374:-1
so has part: feature:6153297-6153374:-1:exon
so has part: feature:6149555-6149965:-1:exon
so has part: feature:6148159-6148323:-1:exon
so has part: feature:6147581-6147661:-1:exon
so has part: feature:6139539-6143885:-1:exon

position:6153374:-1
position: 6153374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6153297-6153374:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6149555-6149965:-1:exon

position:6149965:-1
position: 6149965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6148159-6148323:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6147581-6147661:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6139539-6143885:-1:exon

Aqp4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 38674
gene: Aqp4
product: aquaporin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_036205146.1
SIO_010081: Aqp4
subclass of: SO_0000673
so part of: Aqp4
location: complement(join(6139539..6143885,6147581..6147661,6148159..6148323,6149555..6149969,6152399..6152501))
location: region:6139539-6152501:-1
so has part: feature:6152399-6152501:-1:exon
so has part: feature:6149555-6149969:-1:exon
so has part: feature:6148159-6148323:-1:exon
so has part: feature:6147581-6147661:-1:exon
so has part: feature:6139539-6143885:-1:exon

position:6152501:-1
position: 6152501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6152399-6152501:-1:exon

position:6152399:-1
position: 6152399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6149555-6149969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6148159-6148323:-1:exon