Amblyraja radiata isolate CabotCenter1 chromosome 49, sAmbRad1.1.pri, whole genome shotgun sequence.
type: Entry
definition: Amblyraja radiata isolate CabotCenter1 chromosome 49, sAmbRad1.1.pri, whole genome shotgun sequence.
sequence version: NC_046004.1
sequence date: 2021-04-05
sequence: sequence
division: CON
label: NC_046004.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA610638
dblink: SAMN09948523
keyword: WGS
keyword: RefSeq
source: Amblyraja radiata (thorny skate)
organism: Amblyraja radiata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Amblyraja.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021414.1.\nAssembly name: sAmbRad1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/21. The original whole-genome shotgun project has the\naccession JAAGWR000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 13-JAN-2020\nAssembly Method :: Canu v. 1.7; purge_haplotigs v. bitbucket\n 7.10.2018; scaff10x v. 4.1.0; Bionano\n Solve DLS v. 3.3; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes Illumina polishing v.\n 1.3.1; purge_dups v.\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n gEVAL manual curation v. 2020-01-13; VGP\n assembly pipeline v. 1.5\nAssembly Name :: sAmbRad1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 128.24x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Amblyraja radiata Updated Annotation\n Release 100.20210331\nAnnotation Version :: 100.20210331\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 3795527
topology: linear
so has quality: SO_0000987
location: 1..3795527
location: region:1-3795527:1
RO_0002162: 386614

NC_046004
type: RefSeq
SIO_000068: refseq

PRJNA610638
type: BioProject
SIO_000068: bioproject

SAMN09948523
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3795527:1
position: 3795527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-3795527:1:source
so part of: sequence
organism: Amblyraja radiata
mol type: genomic DNA
isolate: CabotCenter1
chromosome: 49
sex: male
tissue type: testis, liver
country: USA: Gulf of Main
lat lon: 43.1336 N 68.3266 W
collection date: 2017-09-18
collected by: Jeff Kneebone

386614
type: Taxonomy
SIO_000068: taxonomy

LOC116968993
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968993
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <201806..215566
location: region:201806-215566:1
so has part: feature:201806-215566:1:exon
subclass of: SO_0000010

116968993
type: Gene
SIO_000068: ncbigene

position:201806:1
position: 201806
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:215566:1
position: 215566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201806-215566:1:exon

LOC116968993
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968993
product: WD repeat-containing protein 46-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033015972.1
SIO_010081: LOC116968993
subclass of: SO_0000673
so part of: LOC116968993
location: join(<201806..202064,205808..205907,208649..208802,209417..209564,211361..211455,213309..213404,214718..214831,215332..215566)
location: region:201806-215566:1
so has part: feature:201806-202064:1:exon
so has part: feature:205808-205907:1:exon
so has part: feature:208649-208802:1:exon
so has part: feature:209417-209564:1:exon
so has part: feature:211361-211455:1:exon
so has part: feature:213309-213404:1:exon
so has part: feature:214718-214831:1:exon
so has part: feature:215332-215566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201806-202064:1:exon

position:202064:1
position: 202064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205808-205907:1:exon

position:205808:1
position: 205808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205907:1
position: 205907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:208649-208802:1:exon

position:208649:1
position: 208649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208802:1
position: 208802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:209417-209564:1:exon

position:209417:1
position: 209417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209564:1
position: 209564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:211361-211455:1:exon

position:211361:1
position: 211361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211455:1
position: 211455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:213309-213404:1:exon

position:213309:1
position: 213309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213404:1
position: 213404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:214718-214831:1:exon

position:214718:1
position: 214718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214831:1
position: 214831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:215332-215566:1:exon

position:215332:1
position: 215332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968993
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968993
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 46-like
translation: SHACPVSVIPLCPVPHVCLARVLHAPCVPHPVPPPHPVLVQSAPGFLQYLDISVGKEVAAICTKAGRLDVMTHNPHNGIVHLGHPQGTVTLWSPNVKEPLVKMLCHKGGVRAVAVDKSGLYMATSGLDHKLNIFDVRTYRPLHSYLLPAGGAHLTFSQRDLLGVACGNTVQVYKDVHSATVRSPYVSHAVRQGVHGLQFCPYEDVLGVGHGLGFTSMLVPGAGEANFDGLECNPYRSKKQRQEWEVKALLEKLQPELISLEPDRLGQVDPVSMVQRHRDRVERLGYDPTETERFEPRKRMKGRSSTGNLERRKKLVAGGDRRDVVRRSVEQKVKMQKQQKMAASTPSLPPSALTRFNK
SIO_010081: LOC116968993
subclass of: SO_0000673
so part of: LOC116968993
location: join(<201806..202064,205808..205907,208649..208802,209417..209564,211361..211455,213309..213404,214718..214831,215332..215442)
location: region:201806-215442:1
so has part: feature:201806-202064:1:exon
so has part: feature:205808-205907:1:exon
so has part: feature:208649-208802:1:exon
so has part: feature:209417-209564:1:exon
so has part: feature:211361-211455:1:exon
so has part: feature:213309-213404:1:exon
so has part: feature:214718-214831:1:exon
so has part: feature:215332-215442:1:exon

XP_032871863.1
type: Protein
SIO_000068: ncbiprotein

position:215442:1
position: 215442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201806-202064:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205808-205907:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208649-208802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209417-209564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211361-211455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213309-213404:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:214718-214831:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:215332-215442:1:exon

LOC116968992
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 219711..231307
location: region:219711-231307:1
so has part: feature:219711-231307:1:exon
subclass of: SO_0000010

116968992
type: Gene
SIO_000068: ncbigene

position:219711:1
position: 219711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231307:1
position: 231307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219711-231307:1:exon

LOC116968992
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968992
product: tumor protein p63-regulated gene 1-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015971.1
SIO_010081: LOC116968992
subclass of: SO_0000673
so part of: LOC116968992
location: join(219711..220143,224590..224678,225175..225351,226294..226444,230411..230612,231226..231307)
location: region:219711-231307:1
so has part: feature:219711-220143:1:exon
so has part: feature:224590-224678:1:exon
so has part: feature:225175-225351:1:exon
so has part: feature:226294-226444:1:exon
so has part: feature:230411-230612:1:exon
so has part: feature:231226-231307:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219711-220143:1:exon

position:220143:1
position: 220143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224590-224678:1:exon

position:224590:1
position: 224590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224678:1
position: 224678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:225175-225351:1:exon

position:225175:1
position: 225175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225351:1
position: 225351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:226294-226444:1:exon

position:226294:1
position: 226294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226444:1
position: 226444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:230411-230612:1:exon

position:230411:1
position: 230411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230612:1
position: 230612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:231226-231307:1:exon

position:231226:1
position: 231226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968992
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein p63-regulated gene 1-like protein
translation: MEHQLEPSAPSTQLEPDATFTQGPGVNPVNPADLSRLYPPLPRGEFSPSVLPPPPGQSHRDEFFALRPGALQAAISETERTLEEEDGKVQGTWLLTEVDHWNRESERLLLLTPRVLLVSHYDFVGLSCHLLVRIPLQYIDTITVGPFHFPTTSLSRRCGLGLRLGWDKLHESTFRSRWNPWARDLPTVILTEHPGVESGHLAPLGSLESFRWELTQGVRTAHQEQPLAGRANGPLILEKPIEMETVLGLVSALSNWAQLGYAKPRRMLAF
SIO_010081: LOC116968992
subclass of: SO_0000673
so part of: LOC116968992
location: join(219943..220143,224590..224678,225175..225351,226294..226444,230411..230605)
location: region:219943-230605:1
so has part: feature:219943-220143:1:exon
so has part: feature:224590-224678:1:exon
so has part: feature:225175-225351:1:exon
so has part: feature:226294-226444:1:exon
so has part: feature:230411-230605:1:exon

XP_032871862.1
type: Protein
SIO_000068: ncbiprotein

position:219943:1
position: 219943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230605:1
position: 230605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219943-220143:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224590-224678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225175-225351:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226294-226444:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230411-230605:1:exon

lrrc23
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: lrrc23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(373475..392698)
location: region:373475-392698:-1
so has part: feature:373475-392698:-1:exon
subclass of: SO_0000010

116968984
type: Gene
SIO_000068: ncbigene

position:373475:-1
position: 373475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392698:-1
position: 392698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373475-392698:-1:exon

lrrc23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: lrrc23
product: leucine rich repeat containing 23, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033015965.1
SIO_010081: lrrc23
subclass of: SO_0000673
so part of: lrrc23
location: complement(join(373475..374053,377921..378075,381688..381764,382411..382547,384574..384704,387676..387929,389806..389915,391393..391491,391829..392385,392524..392698))
location: region:373475-392698:-1
so has part: feature:392524-392698:-1:exon
so has part: feature:391829-392385:-1:exon
so has part: feature:391393-391491:-1:exon
so has part: feature:389806-389915:-1:exon
so has part: feature:387676-387929:-1:exon
so has part: feature:384574-384704:-1:exon
so has part: feature:382411-382547:-1:exon
so has part: feature:381688-381764:-1:exon
so has part: feature:377921-378075:-1:exon
so has part: feature:373475-374053:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392524-392698:-1:exon

position:392524:-1
position: 392524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:391829-392385:-1:exon

position:391829:-1
position: 391829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392385:-1
position: 392385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:391393-391491:-1:exon

position:391393:-1
position: 391393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391491:-1
position: 391491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:389806-389915:-1:exon

position:389806:-1
position: 389806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389915:-1
position: 389915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:387676-387929:-1:exon

position:387676:-1
position: 387676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387929:-1
position: 387929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:384574-384704:-1:exon

position:384574:-1
position: 384574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384704:-1
position: 384704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:382411-382547:-1:exon

position:382411:-1
position: 382411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382547:-1
position: 382547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:381688-381764:-1:exon

position:381688:-1
position: 381688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381764:-1
position: 381764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:377921-378075:-1:exon

position:377921:-1
position: 377921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378075:-1
position: 378075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:373475-374053:-1:exon

position:374053:-1
position: 374053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lrrc23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: lrrc23
product: leucine rich repeat containing 23, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033015963.1
SIO_010081: lrrc23
subclass of: SO_0000673
so part of: lrrc23
location: complement(join(373475..374053,377921..378075,381688..381764,382411..382547,384574..384704,387676..387929,389806..389915,391393..391491,391829..392698))
location: region:373475-392698:-1
so has part: feature:391829-392698:-1:exon
so has part: feature:391393-391491:-1:exon
so has part: feature:389806-389915:-1:exon
so has part: feature:387676-387929:-1:exon
so has part: feature:384574-384704:-1:exon
so has part: feature:382411-382547:-1:exon
so has part: feature:381688-381764:-1:exon
so has part: feature:377921-378075:-1:exon
so has part: feature:373475-374053:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391829-392698:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391393-391491:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389806-389915:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387676-387929:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384574-384704:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:382411-382547:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:381688-381764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:377921-378075:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373475-374053:-1:exon

lrrc23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: lrrc23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 23
translation: MSETETDAEREAGSQIEDEGQEEEDEEKEEQPEPKPLTTEILAESLSLLCKTGNSLSHAYVRADLRDRELTDINALRPFVHLRYVDISGNMIQDISPLANLSQLLWVSADGNHLSSAQVEELPFLQVASFARNSIRDTEGIYHPLLETLNLNNNQIREVSGLDPMKLSRLHTLELRGNLLESTRGIILPNLRHLYLAANTISRLEDLDALTGLQTLHLRENHIETLQGFSPTMVALQYINLRSNLIVEINELKHLECVPNLRALVLADNPCAEEDSHRLEALLTVPGLERLDKDSFGIDERAEAASTRKQREEEAAAEKAAKDQDIEGLDTT
SIO_010081: lrrc23
subclass of: SO_0000673
so part of: lrrc23
location: complement(join(374012..374053,377921..378075,381688..381764,382411..382547,384574..384704,387676..387929,389806..389915,391393..391485))
location: region:374012-391485:-1
so has part: feature:391393-391485:-1:exon
so has part: feature:389806-389915:-1:exon
so has part: feature:387676-387929:-1:exon
so has part: feature:384574-384704:-1:exon
so has part: feature:382411-382547:-1:exon
so has part: feature:381688-381764:-1:exon
so has part: feature:377921-378075:-1:exon
so has part: feature:374012-374053:-1:exon

XP_032871854.1
type: Protein
SIO_000068: ncbiprotein

position:374012:-1
position: 374012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391485:-1
position: 391485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391393-391485:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389806-389915:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387676-387929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384574-384704:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:382411-382547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:381688-381764:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377921-378075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374012-374053:-1:exon

lrrc23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: lrrc23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 23
translation: MSETETDAEREAGSQIEDEGQEEEDEEKEEQPEPKPLTTEILAESLSLLCKTGNSLSHAYVRADLRDRELTDINALRPFVHLRYVDISGNMIQDISPLANLSQLLWVSADGNHLSSAQVEELPFLQVASFARNSIRDTEGIYHPLLETLNLNNNQIREVSGLDPMKLSRLHTLELRGNLLESTRGIILPNLRHLYLAANTISRLEDLDALTGLQTLHLRENHIETLQGFSPTMVALQYINLRSNLIVEINELKHLECVPNLRALVLADNPCAEEDSHRLEALLTVPGLERLDKDSFGIDERAEAASTRKQREEEAAAEKAAKDQDIEGLDTT
SIO_010081: lrrc23
subclass of: SO_0000673
so part of: lrrc23
location: complement(join(374012..374053,377921..378075,381688..381764,382411..382547,384574..384704,387676..387929,389806..389915,391393..391485))
location: region:374012-391485:-1
so has part: feature:391393-391485:-1:exon
so has part: feature:389806-389915:-1:exon
so has part: feature:387676-387929:-1:exon
so has part: feature:384574-384704:-1:exon
so has part: feature:382411-382547:-1:exon
so has part: feature:381688-381764:-1:exon
so has part: feature:377921-378075:-1:exon
so has part: feature:374012-374053:-1:exon

XP_032871856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391393-391485:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389806-389915:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387676-387929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384574-384704:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:382411-382547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:381688-381764:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377921-378075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374012-374053:-1:exon

LOC116968990
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 481374..502378
location: region:481374-502378:1
so has part: feature:481374-502378:1:exon
subclass of: SO_0000011

116968990
type: Gene
SIO_000068: ncbigene

position:481374:1
position: 481374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502378:1
position: 502378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481374-502378:1:exon

LOC116968990
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968990
product: uncharacterized LOC116968990
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004410582.1
SIO_010081: LOC116968990
subclass of: SO_0000673
so part of: LOC116968990
location: join(481374..481385,495862..495876,502072..502378)
location: region:481374-502378:1
so has part: feature:481374-481385:1:exon
so has part: feature:495862-495876:1:exon
so has part: feature:502072-502378:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:481374-481385:1:exon

position:481385:1
position: 481385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:495862-495876:1:exon

position:495862:1
position: 495862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495876:1
position: 495876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:502072-502378:1:exon

position:502072:1
position: 502072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968989
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(492512..508660)
location: region:492512-508660:-1
so has part: feature:492512-508660:-1:exon
subclass of: SO_0000011

116968989
type: Gene
SIO_000068: ncbigene

position:492512:-1
position: 492512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508660:-1
position: 508660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492512-508660:-1:exon

LOC116968989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968989
product: uncharacterized LOC116968989
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004410581.1
SIO_010081: LOC116968989
subclass of: SO_0000673
so part of: LOC116968989
location: complement(join(492512..492565,504812..504813,508642..508660))
location: region:492512-508660:-1
so has part: feature:508642-508660:-1:exon
so has part: feature:504812-504813:-1:exon
so has part: feature:492512-492565:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:508642-508660:-1:exon

position:508642:-1
position: 508642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:504812-504813:-1:exon

position:504812:-1
position: 504812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504813:-1
position: 504813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:492512-492565:-1:exon

position:492565:-1
position: 492565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968973
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 589160..599937
location: region:589160-599937:1
so has part: feature:589160-599937:1:exon
subclass of: SO_0000010

116968973
type: Gene
SIO_000068: ncbigene

position:589160:1
position: 589160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599937:1
position: 599937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589160-599937:1:exon

LOC116968973
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968973
product: pancreatic secretory granule membrane major glycoprotein GP2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015952.1
SIO_010081: LOC116968973
subclass of: SO_0000673
so part of: LOC116968973
location: join(589160..589255,590618..590694,593306..593485,598575..598716,599601..599677,599807..599937)
location: region:589160-599937:1
so has part: feature:589160-589255:1:exon
so has part: feature:590618-590694:1:exon
so has part: feature:593306-593485:1:exon
so has part: feature:598575-598716:1:exon
so has part: feature:599601-599677:1:exon
so has part: feature:599807-599937:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:589160-589255:1:exon

position:589255:1
position: 589255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:590618-590694:1:exon

position:590618:1
position: 590618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590694:1
position: 590694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:593306-593485:1:exon

position:593306:1
position: 593306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593485:1
position: 593485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:598575-598716:1:exon

position:598575:1
position: 598575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598716:1
position: 598716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:599601-599677:1:exon

position:599601:1
position: 599601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599677:1
position: 599677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:599807-599937:1:exon

position:599807:1
position: 599807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968973
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pancreatic secretory granule membrane major glycoprotein GP2-like
translation: MDDSNLEEGWYRFSSYDNVTIPESVVPRYRCSGWSPGWLNGSHPSVEDGEVNRTVCFHWVNHGGNDDTCPRHQEIKIKKCSSYFVYFLKPISWSYSVYCADSVHSDPCVNHTVLDQPWRSTNCTNTQCTNGKMKSDKNLAEAWYRFNSSGGWKIPETTIRANHCSGKKSGWLNVSQPWIFMESGDRAPAPCFPVSGRRSVGCCPHYRRDLEQFQLL
SIO_010081: LOC116968973
subclass of: SO_0000673
so part of: LOC116968973
location: join(589212..589255,590618..590694,593306..593485,598575..598716,599601..599677,599807..599937)
location: region:589212-599937:1
so has part: feature:589212-589255:1:exon
so has part: feature:590618-590694:1:exon
so has part: feature:593306-593485:1:exon
so has part: feature:598575-598716:1:exon
so has part: feature:599601-599677:1:exon
so has part: feature:599807-599937:1:exon

XP_032871843.1
type: Protein
SIO_000068: ncbiprotein

position:589212:1
position: 589212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589212-589255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:590618-590694:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:593306-593485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598575-598716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:599601-599677:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599807-599937:1:exon

LOC116968974
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 680138..684781
location: region:680138-684781:1
so has part: feature:680138-684781:1:exon
subclass of: SO_0000010

116968974
type: Gene
SIO_000068: ncbigene

position:680138:1
position: 680138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684781:1
position: 684781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680138-684781:1:exon

LOC116968974
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968974
product: zinc finger protein 664-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015953.1
SIO_010081: LOC116968974
subclass of: SO_0000673
so part of: LOC116968974
location: join(680138..680201,682516..683113,684776..684781)
location: region:680138-684781:1
so has part: feature:680138-680201:1:exon
so has part: feature:682516-683113:1:exon
so has part: feature:684776-684781:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:680138-680201:1:exon

position:680201:1
position: 680201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:682516-683113:1:exon

position:682516:1
position: 682516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683113:1
position: 683113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:684776-684781:1:exon

position:684776:1
position: 684776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968974
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 664-like
translation: MAGHNKEKRYECDVCGKAWQYPSQLEIHRRVHTGERPFDCSECGKNFTLYANMMRHYQVHSLTCSDCGKDFTTAQELKIHQQVHTGKKPFNCSDCGKSFKTTNELKIHQRVHTGEKPFGCSTCGKSFSQSSGLQVHRRVHSSERPFTCSDCGKGFKYSTDLKA
SIO_010081: LOC116968974
subclass of: SO_0000673
so part of: LOC116968974
location: join(682628..683113,684776..684781)
location: region:682628-684781:1
so has part: feature:682628-683113:1:exon
so has part: feature:684776-684781:1:exon

XP_032871844.1
type: Protein
SIO_000068: ncbiprotein

position:682628:1
position: 682628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682628-683113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:684776-684781:1:exon

LOC116968970
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 708375..721900
location: region:708375-721900:1
so has part: feature:708375-721900:1:exon
subclass of: SO_0000011

116968970
type: Gene
SIO_000068: ncbigene

position:708375:1
position: 708375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721900:1
position: 721900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708375-721900:1:exon

LOC116968970
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968970
product: uncharacterized LOC116968970
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004410576.1
SIO_010081: LOC116968970
subclass of: SO_0000673
so part of: LOC116968970
location: join(708375..708389,710116..710117,721782..721900)
location: region:708375-721900:1
so has part: feature:708375-708389:1:exon
so has part: feature:710116-710117:1:exon
so has part: feature:721782-721900:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708375-708389:1:exon

position:708389:1
position: 708389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:710116-710117:1:exon

position:710116:1
position: 710116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710117:1
position: 710117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:721782-721900:1:exon

position:721782:1
position: 721782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968969
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 721966..742174
location: region:721966-742174:1
so has part: feature:721966-742174:1:exon
subclass of: SO_0000011

116968969
type: Gene
SIO_000068: ncbigene

position:721966:1
position: 721966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742174:1
position: 742174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721966-742174:1:exon

LOC116968969
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968969
product: uncharacterized LOC116968969
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004410575.1
SIO_010081: LOC116968969
subclass of: SO_0000673
so part of: LOC116968969
location: join(721966..722146,722269..722272,742135..742174)
location: region:721966-742174:1
so has part: feature:721966-722146:1:exon
so has part: feature:722269-722272:1:exon
so has part: feature:742135-742174:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721966-722146:1:exon

position:722146:1
position: 722146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:722269-722272:1:exon

position:722269:1
position: 722269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722272:1
position: 722272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:742135-742174:1:exon

position:742135:1
position: 742135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968967
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 840750..859457
location: region:840750-859457:1
so has part: feature:840750-859457:1:exon
subclass of: SO_0000011

116968967
type: Gene
SIO_000068: ncbigene

position:840750:1
position: 840750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859457:1
position: 859457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840750-859457:1:exon

LOC116968967
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968967
product: uncharacterized LOC116968967
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004410573.1
SIO_010081: LOC116968967
subclass of: SO_0000673
so part of: LOC116968967
location: join(840750..840925,841048..841051,859418..859457)
location: region:840750-859457:1
so has part: feature:840750-840925:1:exon
so has part: feature:841048-841051:1:exon
so has part: feature:859418-859457:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:840750-840925:1:exon

position:840925:1
position: 840925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:841048-841051:1:exon

position:841048:1
position: 841048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841051:1
position: 841051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:859418-859457:1:exon

position:859418:1
position: 859418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968975
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 934333..935226
location: region:934333-935226:1
so has part: feature:934333-935226:1:exon
subclass of: SO_0000010

116968975
type: Gene
SIO_000068: ncbigene

position:934333:1
position: 934333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935226:1
position: 935226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934333-935226:1:exon

LOC116968975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968975
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_033015955.1
SIO_010081: LOC116968975
subclass of: SO_0000673
so part of: LOC116968975
location: 934333..935226
location: region:934333-935226:1
so has part: feature:934333-935226:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934333-935226:1:exon

LOC116968975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MLTVAILYRGKCGLSKGTTRYMVAMAISNLLVLIAHVLIEKIYMYYTPNSFLFLTAICPSNIYLRVVTLDYSVWLTMSFTFDRFVSICCPKLRLAYCTDRTAVMVIVSLWPLSCLKFIPFNFMYVPRLIVDSVKWECRPKRDFFISGWWLVFSWMCTISLPLLPILIMVLFNGLTVRNIIAANRVRRRLKATDSGKDTEAENRRKSIVLLFTVSGAFILLWTTVTVSFICTRVTVNFAGGDHSSPFYIANEVGVLLTHVSSCANSCIYGMTQRKFRLEVKNAFTHLTSIVQLMTPAR
SIO_010081: LOC116968975
subclass of: SO_0000673
so part of: LOC116968975
location: 934333..935226
location: region:934333-935226:1
so has part: feature:934333-935226:1:exon

XP_032871846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:934333-935226:1:exon

LOC116968966
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1075011..>1100901)
location: region:1075011-1100901:-1
so has part: feature:1075011-1100901:-1:exon
subclass of: SO_0000010

116968966
type: Gene
SIO_000068: ncbigene

position:1075011:-1
position: 1075011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100901:-1
position: 1100901
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075011-1100901:-1:exon

LOC116968966
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968966
product: zinc finger protein 208-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015949.1
SIO_010081: LOC116968966
subclass of: SO_0000673
so part of: LOC116968966
location: complement(join(1075011..1076421,1098988..1099678,1099763..>1100901))
location: region:1075011-1100901:-1
so has part: feature:1099763-1100901:-1:exon
so has part: feature:1098988-1099678:-1:exon
so has part: feature:1075011-1076421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1099763-1100901:-1:exon

position:1099763:-1
position: 1099763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1098988-1099678:-1:exon

position:1098988:-1
position: 1098988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099678:-1
position: 1099678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1075011-1076421:-1:exon

position:1076421:-1
position: 1076421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968966
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 208-like
translation: RYECDVCGKAWQKPSKLEAHRRVHTGERPFDCSECGKSFTRYASLLRHNRVHSGEKPFTCSDCDKSFKTTQELKIHQRVHTGEKPYGCSTCGKSFAQLSGLLRHGLVHSSERPFTCSDCGKAFKSSQEMKVHMRLHTGERPFTCSDCGKGLKSSKELKVHRRQHMGERPYICSDCGKGFKSSPELKMHMRLHTGERPFTCSDCGKGFIRSDSLLEHQHTHTGERPYTCSDCGKGFTRANGLLVHQRTHSDERPYTCAQCGKGFTCSNRLLQHQHTHTGERPYTCTQCGKGFTCSNYLLQHQRTHTGQHPYTCAQCGKGFTKSTRLLSHQRTHTGERPFTCAQCGKGFTHSNYLLEHQRIHTGERPYTCTQCGKGFTRSSSLLEHQRIHTGERPYTCTQCGKGFIRSSRLLSHQRTHTGEHPFTCTQCSKGFTSSTKLLEHQSVHSGERPFSCSECGKGFKTTQELKVHWRVHTGEKPYGCSTCGKSFARLSGLWVHRRVHSSERPFTCSDCGKGFKSSLALKVHMRLHTGERPYTCSDCGKGFARLNSLLVHRRTHTSERPYTCAQCGKGFTQSSNLVVHQRTHTGERPYTCAQCGKGFTRSNSLLSHQRIHRRVHTGERPFDCSDCGKCFKSSSVLKEHRHLHTGERPYICNDCGKGFTRSSYLLMHQRTHTGERPYTCAQCGKGFTQSSSLLEHQRNHTGERPFTCAQCGKGFIRSSTLLSHQRNHTGERPFTCAQCGKGFIRSSTLLSHQRTHTVEQPYTCAQCGKGFTESSSLLVHQRTHTGERPFTCIQCGKGFIKSNYLLSHQRIHTGERPHTCTQCGKGFTRSSTLLSHQRTHTGERPYTCAQCGKSFTQSSHLKEHQRTHTGERPYTCTQCGQVFMYSSTLLSHQRTHTGERPYTCAKCGKGFMYSSKLLSHQRTHTGERPYTCAQCGKGFTQSNHLKEHQHTHSGERPYTCVQCGKGFTSSTKLLSHQRVHTSDHPVPSPVRGEHFAMASHALSHQRMHTSGQPYDCPYCSEEFDSSRGLRQHQRTHAGEQLLPL
SIO_010081: LOC116968966
subclass of: SO_0000673
so part of: LOC116968966
location: complement(join(1075117..1076421,1098988..1099678,1099763..>1100901))
location: region:1075117-1100901:-1
so has part: feature:1099763-1100901:-1:exon
so has part: feature:1098988-1099678:-1:exon
so has part: feature:1075117-1076421:-1:exon

XP_032871840.1
type: Protein
SIO_000068: ncbiprotein

position:1075117:-1
position: 1075117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1099763-1100901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1098988-1099678:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1075117-1076421:-1:exon

LOC116968971
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1184804..1195560
location: region:1184804-1195560:1
so has part: feature:1184804-1195560:1:exon
subclass of: SO_0000011

116968971
type: Gene
SIO_000068: ncbigene

position:1184804:1
position: 1184804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195560:1
position: 1195560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184804-1195560:1:exon

LOC116968971
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968971
product: uncharacterized LOC116968971
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004410577.1
SIO_010081: LOC116968971
subclass of: SO_0000673
so part of: LOC116968971
location: join(1184804..1185134,1192311..1192314,1195548..1195560)
location: region:1184804-1195560:1
so has part: feature:1184804-1185134:1:exon
so has part: feature:1192311-1192314:1:exon
so has part: feature:1195548-1195560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1184804-1185134:1:exon

position:1185134:1
position: 1185134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1192311-1192314:1:exon

position:1192311:1
position: 1192311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1192314:1
position: 1192314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1195548-1195560:1:exon

position:1195548:1
position: 1195548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968968
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1206603..1215136)
location: region:1206603-1215136:-1
so has part: feature:1206603-1215136:-1:exon
subclass of: SO_0000011

116968968
type: Gene
SIO_000068: ncbigene

position:1206603:-1
position: 1206603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215136:-1
position: 1215136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206603-1215136:-1:exon

LOC116968968
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968968
product: uncharacterized LOC116968968
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004410574.1
SIO_010081: LOC116968968
subclass of: SO_0000673
so part of: LOC116968968
location: complement(join(1206603..1206613,1207634..1207637,1215015..1215136))
location: region:1206603-1215136:-1
so has part: feature:1215015-1215136:-1:exon
so has part: feature:1207634-1207637:-1:exon
so has part: feature:1206603-1206613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1215015-1215136:-1:exon

position:1215015:-1
position: 1215015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1207634-1207637:-1:exon

position:1207634:-1
position: 1207634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207637:-1
position: 1207637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1206603-1206613:-1:exon

position:1206613:-1
position: 1206613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968994
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1398702..1400200)
location: region:1398702-1400200:-1
so has part: feature:1398702-1400200:-1:exon
subclass of: SO_0000011

116968994
type: Gene
SIO_000068: ncbigene

position:1398702:-1
position: 1398702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1400200:-1
position: 1400200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1398702-1400200:-1:exon

LOC116968994
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968994
product: uncharacterized LOC116968994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004410583.1
SIO_010081: LOC116968994
subclass of: SO_0000673
so part of: LOC116968994
location: complement(join(1398702..1398718,1399397..1399467,1400162..1400200))
location: region:1398702-1400200:-1
so has part: feature:1400162-1400200:-1:exon
so has part: feature:1399397-1399467:-1:exon
so has part: feature:1398702-1398718:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1400162-1400200:-1:exon

position:1400162:-1
position: 1400162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1399397-1399467:-1:exon

position:1399397:-1
position: 1399397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399467:-1
position: 1399467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1398702-1398718:-1:exon

position:1398718:-1
position: 1398718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968976
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1442640..1445507
location: region:1442640-1445507:1
so has part: feature:1442640-1445507:1:exon
subclass of: SO_0000010

116968976
type: Gene
SIO_000068: ncbigene

position:1442640:1
position: 1442640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445507:1
position: 1445507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1442640-1445507:1:exon

LOC116968976
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968976
product: zinc-binding protein A33-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015956.1
SIO_010081: LOC116968976
subclass of: SO_0000673
so part of: LOC116968976
location: join(1442640..1442655,1444984..1445327,1445367..1445507)
location: region:1442640-1445507:1
so has part: feature:1442640-1442655:1:exon
so has part: feature:1444984-1445327:1:exon
so has part: feature:1445367-1445507:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1442640-1442655:1:exon

position:1442655:1
position: 1442655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1444984-1445327:1:exon

position:1444984:1
position: 1444984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445327:1
position: 1445327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1445367-1445507:1:exon

position:1445367:1
position: 1445367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968976
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968976
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1445085..1445087,aa:OTHER)
product: LOW QUALITY PROTEIN: zinc-binding protein A33-like
translation: MADKRIPIKLKLNPDTAHPRLILSTDLTAIRLGAKQKVPXKLERFVQWHGVLASQGFNTGSHYWEVEVGRNTMWSVGVVKASVLRKAEFTPEPKSGAWVLWRLGEEYTTMSSTRTALPIPAGQVTLYNADDMSHLYTFRDKFSEKLYPYFSTGCNIDCMQIVHLHI
SIO_010081: LOC116968976
subclass of: SO_0000673
so part of: LOC116968976
location: join(1442640..1442655,1444984..1445327,1445367..1445507)
location: region:1442640-1445507:1
so has part: feature:1442640-1442655:1:exon
so has part: feature:1444984-1445327:1:exon
so has part: feature:1445367-1445507:1:exon

XP_032871847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1442640-1442655:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1444984-1445327:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1445367-1445507:1:exon

LOC116968977
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1783591..1787114
location: region:1783591-1787114:1
so has part: feature:1783591-1787114:1:exon
subclass of: SO_0000010

116968977
type: Gene
SIO_000068: ncbigene

position:1783591:1
position: 1783591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1787114:1
position: 1787114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1783591-1787114:1:exon

LOC116968977
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968977
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_033015957.1
SIO_010081: LOC116968977
subclass of: SO_0000673
so part of: LOC116968977
location: join(1783591..1783660,1786213..1787114)
location: region:1783591-1787114:1
so has part: feature:1783591-1783660:1:exon
so has part: feature:1786213-1787114:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1783591-1783660:1:exon

position:1783660:1
position: 1783660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1786213-1787114:1:exon

position:1786213:1
position: 1786213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968977
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MGPAPILYVKEIFYPIMAAYGIPANVVTAAILYRGKCGLSKGITRYMVSMAMSDLLVIFFQVLLQGIYVYYNPNAFFIRSTVCPSYVYLRILTLDYSVWLTLSFTFDRFVSICCPKLRLTYCTDKTAAVVIASLCALSCLKYIPFYFMYEPRFTMDNVNWGCRPRPAYFTSIGWVVFSWMCNISLSLLPFVLILLLNGLTVKNIIAASRVRRRLKGHDGKDTESENRRKSIVLLFMVSGTSILLWTTGAVTFICTRITINFVGSDLTSPSNIANEVGVLLIRVSSCANTCIYAMTQSKFRQELKNGIKRLIHFFTKPTKRTRQ
SIO_010081: LOC116968977
subclass of: SO_0000673
so part of: LOC116968977
location: join(1783591..1783660,1786213..1787114)
location: region:1783591-1787114:1
so has part: feature:1783591-1783660:1:exon
so has part: feature:1786213-1787114:1:exon

XP_032871848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1783591-1783660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1786213-1787114:1:exon

LOC116968988
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2050134..2060822
location: region:2050134-2060822:1
so has part: feature:2050134-2060822:1:exon
subclass of: SO_0000011

116968988
type: Gene
SIO_000068: ncbigene

position:2050134:1
position: 2050134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2060822:1
position: 2060822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2050134-2060822:1:exon

LOC116968988
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968988
product: uncharacterized LOC116968988
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004410580.1
SIO_010081: LOC116968988
subclass of: SO_0000673
so part of: LOC116968988
location: join(2050134..2050144,2051083..2051084,2060745..2060822)
location: region:2050134-2060822:1
so has part: feature:2050134-2050144:1:exon
so has part: feature:2051083-2051084:1:exon
so has part: feature:2060745-2060822:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2050134-2050144:1:exon

position:2050144:1
position: 2050144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2051083-2051084:1:exon

position:2051083:1
position: 2051083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2051084:1
position: 2051084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2060745-2060822:1:exon

position:2060745:1
position: 2060745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968986
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2208254..2219086)
location: region:2208254-2219086:-1
so has part: feature:2208254-2219086:-1:exon
subclass of: SO_0000011

116968986
type: Gene
SIO_000068: ncbigene

position:2208254:-1
position: 2208254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2219086:-1
position: 2219086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2208254-2219086:-1:exon

LOC116968986
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968986
product: uncharacterized LOC116968986
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004410578.1
SIO_010081: LOC116968986
subclass of: SO_0000673
so part of: LOC116968986
location: complement(join(2208254..2208338,2216348..2216354,2219065..2219086))
location: region:2208254-2219086:-1
so has part: feature:2219065-2219086:-1:exon
so has part: feature:2216348-2216354:-1:exon
so has part: feature:2208254-2208338:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2219065-2219086:-1:exon

position:2219065:-1
position: 2219065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2216348-2216354:-1:exon

position:2216348:-1
position: 2216348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2216354:-1
position: 2216354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2208254-2208338:-1:exon

position:2208338:-1
position: 2208338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968972
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2339114..2354080)
location: region:2339114-2354080:-1
so has part: feature:2339114-2354080:-1:exon
subclass of: SO_0000010

116968972
type: Gene
SIO_000068: ncbigene

position:2339114:-1
position: 2339114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2354080:-1
position: 2354080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2339114-2354080:-1:exon

LOC116968972
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968972
product: zinc finger protein 271-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 139 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015951.1
SIO_010081: LOC116968972
subclass of: SO_0000673
so part of: LOC116968972
location: complement(join(2339114..2340483,2340955..2341352,2349437..2350836,2353840..2354080))
location: region:2339114-2354080:-1
so has part: feature:2353840-2354080:-1:exon
so has part: feature:2349437-2350836:-1:exon
so has part: feature:2340955-2341352:-1:exon
so has part: feature:2339114-2340483:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2353840-2354080:-1:exon

position:2353840:-1
position: 2353840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2349437-2350836:-1:exon

position:2349437:-1
position: 2349437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2350836:-1
position: 2350836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2340955-2341352:-1:exon

position:2340955:-1
position: 2340955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2341352:-1
position: 2341352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2339114-2340483:-1:exon

position:2340483:-1
position: 2340483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968972
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 271-like
translation: MEDHMAGHNKEKRYECDVCGKAWQSPSQLETHRRVHTGERPFDCSECGKNFARYDKLVQHNRVHTGERPFTCSDCGKSFKTAQVLKMHRRVHTDEKSYGCSTCGKSFARSSGLQVHRRVHSNERPFTCSDCGKGFKSSTDLKVHRRLHTGERPYTCSDCGKGFTQSHSLLVHRRTHTGQRPFTCSDCGKGFKSSKDLKVHRRMHIGERPYTCSDCGKGFIRSSSLLVHQHTHTGERPYTCAQCGKGFTQSNHLLSHQRTHTGERPYTCAQCGKGFTQSSNLLEHQRIHTGERPYTCAQCSKGFTRSTYLLVHQRTHTGERPYTCSQCGKGFTYSSNLLKHQRTHTDERPYTCVQCGKGFSQSSDLLVHQRIHTGERPYTCAQCGKGFTQSSDLLVHQRIHTGKRPYTCGQCGKGFTQSSDLLVHQRIHTGERPYTCAQCGKGFSCSSRLMSHQHTHTSDRPRYECDVCGKAWQSPSRLEIHRRVHTGERPFDCSDCGKDFTRADELKNHQRVHTGEKPYGCSTCGKSFTDSSGLLRHRRVHSNERPFTCSDCGKGFKSSAELKLHRRLHTGERPYTCSDCGKGFKSSSELKMHRRVHTGERPYTCSDCGKGFKSSSELKMHRHLHTGERPYTCSDCGKGFIRSSSLLVHQHTHTGERPYTCSDCGKGFTQTSTLLQHQRTHTEERPYTCAQCGKGFTCSDSLLEHQRTHNGDHPYTCTQCGKGFTQSRHLLRHQHAHTGERLYTCAQCGKGFTKSSNLLVHQRTHTGERPYTCGQCGKSFTKSHHLLVHQRTHTGERPYTCPQCGKGFTQSHHLQSHQRTHTGERPYTCAQCGKGFTQSSDLLVHQRIHTGERPFTCAQCGKGFTHSNSLQEHQRIHTGERPYTCAQCGKSFTKSSTLLVHQRTHTGERPYTCALCGKGFTRSTYLLSHQRVHAGDHSVPSPVCGERFSRTSHVLSHQRMHTSGRPYGCPNCGEEFDSSRGLRQHRRAHAGKELLPLREAFQECTGAAGAPAEAHRRETL
SIO_010081: LOC116968972
subclass of: SO_0000673
so part of: LOC116968972
location: complement(join(2339202..2340483,2340955..2341352,2349437..2350819))
location: region:2339202-2350819:-1
so has part: feature:2349437-2350819:-1:exon
so has part: feature:2340955-2341352:-1:exon
so has part: feature:2339202-2340483:-1:exon

XP_032871842.1
type: Protein
SIO_000068: ncbiprotein

position:2339202:-1
position: 2339202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2350819:-1
position: 2350819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2349437-2350819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2340955-2341352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2339202-2340483:-1:exon

trnaa-cgc
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trnaa-cgc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2776197..2776268
location: region:2776197-2776268:1
so has part: feature:2776197-2776268:1:exon
subclass of: SO_0000663

116968997
type: Gene
SIO_000068: ncbigene

position:2776197:1
position: 2776197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2776268:1
position: 2776268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2776197-2776268:1:exon

trnaa-cgc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 386614
gene: trnaa-cgc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon CGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2776229..2776231,aa:Ala,seq:cgc)
SIO_010081: trnaa-cgc
subclass of: SO_0000673
so part of: trnaa-cgc
location: 2776197..2776268
location: region:2776197-2776268:1
so has part: feature:2776197-2776268:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2776197-2776268:1:exon

trnaa-cgc
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trnaa-cgc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2800537..2800608
location: region:2800537-2800608:1
so has part: feature:2800537-2800608:1:exon
subclass of: SO_0000663

116968998
type: Gene
SIO_000068: ncbigene

position:2800537:1
position: 2800537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2800608:1
position: 2800608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2800537-2800608:1:exon

trnaa-cgc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 386614
gene: trnaa-cgc
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon CGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2800569..2800571,aa:Ala,seq:cgc)
SIO_010081: trnaa-cgc
subclass of: SO_0000673
so part of: trnaa-cgc
location: 2800537..2800608
location: region:2800537-2800608:1
so has part: feature:2800537-2800608:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2800537-2800608:1:exon

LOC116968978
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2843951..2853421)
location: region:2843951-2853421:-1
so has part: feature:2843951-2853421:-1:exon
subclass of: SO_0000010

116968978
type: Gene
SIO_000068: ncbigene

position:2843951:-1
position: 2843951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2853421:-1
position: 2853421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2843951-2853421:-1:exon

LOC116968978
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968978
product: proteoglycan 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015958.1
SIO_010081: LOC116968978
subclass of: SO_0000673
so part of: LOC116968978
location: complement(join(2843951..2843991,2846525..2846617,2851174..2851269,2853096..2853421))
location: region:2843951-2853421:-1
so has part: feature:2853096-2853421:-1:exon
so has part: feature:2851174-2851269:-1:exon
so has part: feature:2846525-2846617:-1:exon
so has part: feature:2843951-2843991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2853096-2853421:-1:exon

position:2853096:-1
position: 2853096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2851174-2851269:-1:exon

position:2851174:-1
position: 2851174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2851269:-1
position: 2851269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2846525-2846617:-1:exon

position:2846525:-1
position: 2846525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2846617:-1
position: 2846617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2843951-2843991:-1:exon

position:2843991:-1
position: 2843991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968978
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteoglycan 4-like
translation: MECWSGGRKAQNGVMQMRAGHSFCSPETGVSRAPWTPSILQTNWIIPSTAPTVCPHFITDPASKPTDQIQETTPENHEDLSTDPEPDTSSDPLSDTTRDPQQAMTEDYGQGLTSDPAGFASSDPPSVPTDEPQETTSEPLEDLSTTPEQDTSSVLKEVTWRLKLLM
SIO_010081: LOC116968978
subclass of: SO_0000673
so part of: LOC116968978
location: complement(join(2843951..2843991,2846525..2846617,2851174..2851269,2853096..2853366))
location: region:2843951-2853366:-1
so has part: feature:2853096-2853366:-1:exon
so has part: feature:2851174-2851269:-1:exon
so has part: feature:2846525-2846617:-1:exon
so has part: feature:2843951-2843991:-1:exon

XP_032871849.1
type: Protein
SIO_000068: ncbiprotein

position:2853366:-1
position: 2853366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2853096-2853366:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2851174-2851269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2846525-2846617:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2843951-2843991:-1:exon

LOC116968991
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2930872..2931958)
location: region:2930872-2931958:-1
so has part: feature:2930872-2931958:-1:exon
subclass of: SO_0000010

116968991
type: Gene
SIO_000068: ncbigene

position:2930872:-1
position: 2930872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2931958:-1
position: 2931958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2930872-2931958:-1:exon

LOC116968991
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968991
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015969.1
SIO_010081: LOC116968991
subclass of: SO_0000673
so part of: LOC116968991
location: complement(join(2930872..2931231,2931400..2931958))
location: region:2930872-2931958:-1
so has part: feature:2931400-2931958:-1:exon
so has part: feature:2930872-2931231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2931400-2931958:-1:exon

position:2931400:-1
position: 2931400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2930872-2931231:-1:exon

position:2931231:-1
position: 2931231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968991
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MHRRVHKAEKSYGCSTCGKSFARSSGLRVHRRVHSSERPFTCSDCGKGFKSSTDLKVHRRLHTGERPYTCSYCGKDFTQSSNLLDHQRTHTGERPYTCVQCGKGFAQSSILLAHQHTHTGERPYTCAQCGKGFTQSSNLLSHQRTHTGDRPVPNPVCGERFAMASHALSHQSVHTSGQSYDCPYCGEAFDSSRGLRQHRRAHAGERLLPLRQASQECMGAAAAPVDTH
SIO_010081: LOC116968991
subclass of: SO_0000673
so part of: LOC116968991
location: complement(join(2930987..2931231,2931400..2931841))
location: region:2930987-2931841:-1
so has part: feature:2931400-2931841:-1:exon
so has part: feature:2930987-2931231:-1:exon

XP_032871860.1
type: Protein
SIO_000068: ncbiprotein

position:2930987:-1
position: 2930987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2931841:-1
position: 2931841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2931400-2931841:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2930987-2931231:-1:exon

LOC116968985
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2933991..2942564
location: region:2933991-2942564:1
so has part: feature:2933991-2942564:1:exon
subclass of: SO_0000010

116968985
type: Gene
SIO_000068: ncbigene

position:2933991:1
position: 2933991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2942564:1
position: 2942564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2933991-2942564:1:exon

LOC116968985
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968985
product: zinc finger protein 239-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033015967.1
SIO_010081: LOC116968985
subclass of: SO_0000673
so part of: LOC116968985
location: join(2933991..2934139,2941589..2941645,2941690..2942564)
location: region:2933991-2942564:1
so has part: feature:2933991-2934139:1:exon
so has part: feature:2941589-2941645:1:exon
so has part: feature:2941690-2942564:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2933991-2934139:1:exon

position:2934139:1
position: 2934139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2941589-2941645:1:exon

position:2941589:1
position: 2941589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2941645:1
position: 2941645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2941690-2942564:1:exon

position:2941690:1
position: 2941690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968985
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968985
product: zinc finger protein 239-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015966.1
SIO_010081: LOC116968985
subclass of: SO_0000673
so part of: LOC116968985
location: join(2933991..2934139,2941589..2941636,2941675..2942564)
location: region:2933991-2942564:1
so has part: feature:2933991-2934139:1:exon
so has part: feature:2941589-2941636:1:exon
so has part: feature:2941675-2942564:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2933991-2934139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2941589-2941636:1:exon

position:2941636:1
position: 2941636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2941675-2942564:1:exon

position:2941675:1
position: 2941675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MGRNKEKRYECDVCGKAWQCPSWLEAHRRLHTGERPFDCSDCGKSFNHMSALQVHRRLHTSEKPYDCSTCGKSFTQLSGLQGHWRVHSGERPYTCSDCGKGFKSSSHLKVHRRLHTGERPYTCSDCGKGFSRSSHLLVHQRTHTGEQPYTCAQCGKGFTQSYNLLVHQRTHTGERPYTCTQCGKGFTQFSNLLSHQRVHASDRPSPSPVCGERFAMASHDLSHQRERLVPLRQTFQECTGAAGAPADTH
SIO_010081: LOC116968985
subclass of: SO_0000673
so part of: LOC116968985
location: 2941733..2942482
location: region:2941733-2942482:1
so has part: feature:2941733-2942482:1:exon

XP_032871857.1
type: Protein
SIO_000068: ncbiprotein

position:2941733:1
position: 2941733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2942482:1
position: 2942482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2941733-2942482:1:exon

LOC116968985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MGRNKEKRYECDVCGKAWQCPSWLEAHRRLHTGERPFDCSDCGKSFNHMSALQVHRRLHTSEKPYDCSTCGKSFTQLSGLQGHWRVHSGERPYTCSDCGKGFKSSSHLKVHRRLHTGERPYTCSDCGKGFSRSSHLLVHQRTHTGEQPYTCAQCGKGFTQSYNLLVHQRTHTGERPYTCTQCGKGFTQFSNLLSHQRVHASDRPSPSPVCGERFAMASHDLSHQRERLVPLRQTFQECTGAAGAPADTH
SIO_010081: LOC116968985
subclass of: SO_0000673
so part of: LOC116968985
location: 2941733..2942482
location: region:2941733-2942482:1
so has part: feature:2941733-2942482:1:exon

XP_032871858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2941733-2942482:1:exon

LOC116968979
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968979
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2957058..2959756)
location: region:2957058-2959756:-1
so has part: feature:2957058-2959756:-1:exon
subclass of: SO_0000010

116968979
type: Gene
SIO_000068: ncbigene

position:2957058:-1
position: 2957058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2959756:-1
position: 2959756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2957058-2959756:-1:exon

LOC116968979
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968979
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_033015959.1
SIO_010081: LOC116968979
subclass of: SO_0000673
so part of: LOC116968979
location: complement(join(2957058..2957959,2959687..2959756))
location: region:2957058-2959756:-1
so has part: feature:2959687-2959756:-1:exon
so has part: feature:2957058-2957959:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2959687-2959756:-1:exon

position:2959687:-1
position: 2959687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2957058-2957959:-1:exon

position:2957959:-1
position: 2957959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968979
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968979
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MGRAPILYVKEISYPILALFGIPANVLTAVILCRGKCGLTKGITRYMVAMAMSHLLVVISHVFLREIYIYHNPYSFLSLSTLCSSYIHLRVAILDYSVWLTVSFTFDRFVSICCPKLRLTYCTDKTAAVVIGSLCALSCLKYIPFHFMYEPRFSVDNVNWGCRPKAVYFTSIGWVAFTWLCSASLSLLPIGLIIFLNGLTVRYIVAASRVRRRLKSLEGKDTEAENRRNAIILLFTVSGTSILLWATATVTLICTRVTVNFVGADLTSPSTIANEVGILLLRVSCCANTCIYAMTQSKFRKQLKNGIKILTRVIISPMKQAKQ
SIO_010081: LOC116968979
subclass of: SO_0000673
so part of: LOC116968979
location: complement(join(2957058..2957959,2959687..2959756))
location: region:2957058-2959756:-1
so has part: feature:2959687-2959756:-1:exon
so has part: feature:2957058-2957959:-1:exon

XP_032871850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2959687-2959756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2957058-2957959:-1:exon

LOC116968980
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2974076..2974900)
location: region:2974076-2974900:-1
so has part: feature:2974076-2974900:-1:exon
subclass of: SO_0000010

116968980
type: Gene
SIO_000068: ncbigene

position:2974076:-1
position: 2974076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2974900:-1
position: 2974900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2974076-2974900:-1:exon

LOC116968980
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968980
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_033015960.1
SIO_010081: LOC116968980
subclass of: SO_0000673
so part of: LOC116968980
location: complement(2974076..2974900)
location: region:2974076-2974900:-1
so has part: feature:2974076-2974900:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2974076-2974900:-1:exon

LOC116968980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MAMSDLLVIFFQVLLQGIYVYYNPNAFFIRSTVCPSYVYLRILTLDYSVWLTLSFTFDRFVSICCPKLRLTYCTDKTAAVVIVSLCALSCLKYIPFYFMYEPRFTMDNVNWGCRPKPAYFTSIGWVIFSWMCNISLSLLPFVLILLLNGLTVNNIIAASRVRRRLKGHDGKDTESENRRKSIVLLFTVSGTSILLWTTGAVTFICTRITINFVGSDLTSPSNIANEVGVLLIRVSSCANTCIYAMTQSKFRQELKNGMKSLIHFFTKPTKRTRQ
SIO_010081: LOC116968980
subclass of: SO_0000673
so part of: LOC116968980
location: complement(2974076..2974900)
location: region:2974076-2974900:-1
so has part: feature:2974076-2974900:-1:exon

XP_032871851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2974076-2974900:-1:exon

LOC116968996
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968996
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3058255..3058446
location: region:3058255-3058446:1
so has part: feature:3058255-3058446:1:exon
subclass of: SO_0000623

116968996
type: Gene
SIO_000068: ncbigene

position:3058255:1
position: 3058255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3058446:1
position: 3058446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3058255-3058446:1:exon

LOC116968996
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snRNA
gene: LOC116968996
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004410585.1
SIO_010081: LOC116968996
subclass of: SO_0000673
so part of: LOC116968996
location: 3058255..3058446
location: region:3058255-3058446:1
so has part: feature:3058255-3058446:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3058255-3058446:1:exon

LOC116968982
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3081495..3091224
location: region:3081495-3091224:1
so has part: feature:3081495-3091224:1:exon
subclass of: SO_0000010

116968982
type: Gene
SIO_000068: ncbigene

position:3081495:1
position: 3081495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3091224:1
position: 3091224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3081495-3091224:1:exon

LOC116968982
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968982
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_033015961.1
SIO_010081: LOC116968982
subclass of: SO_0000673
so part of: LOC116968982
location: join(3081495..3081566,3087618..3087687,3090299..3091224)
location: region:3081495-3091224:1
so has part: feature:3081495-3081566:1:exon
so has part: feature:3087618-3087687:1:exon
so has part: feature:3090299-3091224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3081495-3081566:1:exon

position:3081566:1
position: 3081566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3087618-3087687:1:exon

position:3087618:1
position: 3087618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3087687:1
position: 3087687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3090299-3091224:1:exon

position:3090299:1
position: 3090299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968982
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MKMVMVVYTKDMGGSLYVSDNVGEMGRAAILYVNEIIYPILAAFGIPANVLTAVILHRGKCGLSRGITRYMVAMAISDLLVIILHVLLREIYIYHVSNSFLSLSAVCPSNVYLRIVTVDYSVWLTVSFTFDRFVSICCPKLRVIYCTDRTAAVVIMSMCALCCIKYIPFNFMYESRFTVDSVKWGCRPKPAYFTSVWWVAFSWMCSISLSFLPFLLVLLFNGLTVRNIVAASRVRRRLKALDGKDTETENRTKSIVLLFTVSGAYILLWTTATVTYISTRVTVNFVGGDQTSPSYIANDVGVLLMRISSCANTCIYGMTQSRFRQEVKNAVKYLTGVVSKPMKLVRQWAGTRVEM
SIO_010081: LOC116968982
subclass of: SO_0000673
so part of: LOC116968982
location: join(3081495..3081566,3087618..3087687,3090299..3091224)
location: region:3081495-3091224:1
so has part: feature:3081495-3081566:1:exon
so has part: feature:3087618-3087687:1:exon
so has part: feature:3090299-3091224:1:exon

XP_032871852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3081495-3081566:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3087618-3087687:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3090299-3091224:1:exon

LOC116968987
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3198048..3204296
location: region:3198048-3204296:1
so has part: feature:3198048-3204296:1:exon
subclass of: SO_0000011

116968987
type: Gene
SIO_000068: ncbigene

position:3198048:1
position: 3198048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3204296:1
position: 3204296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3198048-3204296:1:exon

LOC116968987
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968987
product: uncharacterized LOC116968987
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004410579.1
SIO_010081: LOC116968987
subclass of: SO_0000673
so part of: LOC116968987
location: join(3198048..3198251,3204138..3204160,3204258..3204296)
location: region:3198048-3204296:1
so has part: feature:3198048-3198251:1:exon
so has part: feature:3204138-3204160:1:exon
so has part: feature:3204258-3204296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3198048-3198251:1:exon

position:3198251:1
position: 3198251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3204138-3204160:1:exon

position:3204138:1
position: 3204138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3204160:1
position: 3204160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3204258-3204296:1:exon

position:3204258:1
position: 3204258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968983
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968983
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3516400..3521438)
location: region:3516400-3521438:-1
so has part: feature:3516400-3521438:-1:exon
subclass of: SO_0000010

116968983
type: Gene
SIO_000068: ncbigene

position:3516400:-1
position: 3516400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3521438:-1
position: 3521438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3516400-3521438:-1:exon

LOC116968983
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968983
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015962.1
SIO_010081: LOC116968983
subclass of: SO_0000673
so part of: LOC116968983
location: complement(join(3516400..3516962,3520471..3520589,3520686..3520708,3521412..3521438))
location: region:3516400-3521438:-1
so has part: feature:3521412-3521438:-1:exon
so has part: feature:3520686-3520708:-1:exon
so has part: feature:3520471-3520589:-1:exon
so has part: feature:3516400-3516962:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3521412-3521438:-1:exon

position:3521412:-1
position: 3521412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3520686-3520708:-1:exon

position:3520686:-1
position: 3520686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3520708:-1
position: 3520708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3520471-3520589:-1:exon

position:3520471:-1
position: 3520471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3520589:-1
position: 3520589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3516400-3516962:-1:exon

position:3516962:-1
position: 3516962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968983
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968983
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MCLSRSHLNEEAGRKQRVRYEAKLLSVVDDYLLIEKFENPFLYNTVLAETPDAIKPVSVTLDVETAHPLLEVSEDRKRVRLRGTRRSLPGTGKRFTGWRCALGSEGFTSGRHYWEVEVAGSRRWSLGVAAESVERKKRATLTPETGVWSIGRWGDGFVAFASLPSHLPARSIPGRVGIYLSYESGTVSFYDADTKSHLHTFTRNKFTEKLYPFFEPWHEDQWLSICSVSAPGVQHCQIEQTNV
SIO_010081: LOC116968983
subclass of: SO_0000673
so part of: LOC116968983
location: complement(join(3516400..3516962,3520471..3520589,3520686..3520708,3521412..3521438))
location: region:3516400-3521438:-1
so has part: feature:3521412-3521438:-1:exon
so has part: feature:3520686-3520708:-1:exon
so has part: feature:3520471-3520589:-1:exon
so has part: feature:3516400-3516962:-1:exon

XP_032871853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3521412-3521438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3520686-3520708:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3520471-3520589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3516400-3516962:-1:exon

LOC116968995
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3522480..3527195)
location: region:3522480-3527195:-1
so has part: feature:3522480-3527195:-1:exon
subclass of: SO_0000011

116968995
type: Gene
SIO_000068: ncbigene

position:3522480:-1
position: 3522480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3527195:-1
position: 3527195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3522480-3527195:-1:exon

LOC116968995
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968995
product: uncharacterized LOC116968995
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004410584.1
SIO_010081: LOC116968995
subclass of: SO_0000673
so part of: LOC116968995
location: complement(join(3522480..3522650,3526966..3527061,3527154..3527195))
location: region:3522480-3527195:-1
so has part: feature:3527154-3527195:-1:exon
so has part: feature:3526966-3527061:-1:exon
so has part: feature:3522480-3522650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3527154-3527195:-1:exon

position:3527154:-1
position: 3527154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3526966-3527061:-1:exon

position:3526966:-1
position: 3526966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3527061:-1
position: 3527061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3522480-3522650:-1:exon

position:3522650:-1
position: 3522650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition