Amblyraja radiata isolate CabotCenter1 chromosome 47, sAmbRad1.1.pri, whole genome shotgun sequence.
type: Entry
definition: Amblyraja radiata isolate CabotCenter1 chromosome 47, sAmbRad1.1.pri, whole genome shotgun sequence.
sequence version: NC_046002.1
sequence date: 2021-04-05
sequence: sequence
division: CON
label: NC_046002.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA610638
dblink: SAMN09948523
keyword: WGS
keyword: RefSeq
source: Amblyraja radiata (thorny skate)
organism: Amblyraja radiata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Amblyraja.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021412.1.\nAssembly name: sAmbRad1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/21. The original whole-genome shotgun project has the\naccession JAAGWR000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 13-JAN-2020\nAssembly Method :: Canu v. 1.7; purge_haplotigs v. bitbucket\n 7.10.2018; scaff10x v. 4.1.0; Bionano\n Solve DLS v. 3.3; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes Illumina polishing v.\n 1.3.1; purge_dups v.\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n gEVAL manual curation v. 2020-01-13; VGP\n assembly pipeline v. 1.5\nAssembly Name :: sAmbRad1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 128.24x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Amblyraja radiata Updated Annotation\n Release 100.20210331\nAnnotation Version :: 100.20210331\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 8058312
topology: linear
so has quality: SO_0000987
location: 1..8058312
location: region:1-8058312:1
RO_0002162: 386614

NC_046002
type: RefSeq
SIO_000068: refseq

PRJNA610638
type: BioProject
SIO_000068: bioproject

SAMN09948523
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8058312:1
position: 8058312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-8058312:1:source
so part of: sequence
organism: Amblyraja radiata
mol type: genomic DNA
isolate: CabotCenter1
chromosome: 47
sex: male
tissue type: testis, liver
country: USA: Gulf of Main
lat lon: 43.1336 N 68.3266 W
collection date: 2017-09-18
collected by: Jeff Kneebone

386614
type: Taxonomy
SIO_000068: taxonomy

LOC116968931
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 21451..76989
location: region:21451-76989:1
so has part: feature:21451-76989:1:exon
subclass of: SO_0000010

116968931
type: Gene
SIO_000068: ncbigene

position:21451:1
position: 21451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76989:1
position: 76989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21451-76989:1:exon

LOC116968931
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968931
product: putative PIP5K1A and PSMD4-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015926.1
SIO_010081: LOC116968931
subclass of: SO_0000673
so part of: LOC116968931
location: join(21451..21589,24468..24509,27918..27949,31025..31108,33569..33699,36505..36622,39956..40108,40886..41185,42603..42823,43650..43733,44519..44567,46014..46098,49117..49269,50925..51072,51732..51809,52948..53068,55736..55831,65349..65476,66886..67026,68158..68272,70459..70545,71273..71341,72275..72490,73296..73404,74199..74330,74927..75000,76624..76989)
location: region:21451-76989:1
so has part: feature:21451-21589:1:exon
so has part: feature:24468-24509:1:exon
so has part: feature:27918-27949:1:exon
so has part: feature:31025-31108:1:exon
so has part: feature:33569-33699:1:exon
so has part: feature:36505-36622:1:exon
so has part: feature:39956-40108:1:exon
so has part: feature:40886-41185:1:exon
so has part: feature:42603-42823:1:exon
so has part: feature:43650-43733:1:exon
so has part: feature:44519-44567:1:exon
so has part: feature:46014-46098:1:exon
so has part: feature:49117-49269:1:exon
so has part: feature:50925-51072:1:exon
so has part: feature:51732-51809:1:exon
so has part: feature:52948-53068:1:exon
so has part: feature:55736-55831:1:exon
so has part: feature:65349-65476:1:exon
so has part: feature:66886-67026:1:exon
so has part: feature:68158-68272:1:exon
so has part: feature:70459-70545:1:exon
so has part: feature:71273-71341:1:exon
so has part: feature:72275-72490:1:exon
so has part: feature:73296-73404:1:exon
so has part: feature:74199-74330:1:exon
so has part: feature:74927-75000:1:exon
so has part: feature:76624-76989:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21451-21589:1:exon

position:21589:1
position: 21589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24468-24509:1:exon

position:24468:1
position: 24468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24509:1
position: 24509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27918-27949:1:exon

position:27918:1
position: 27918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27949:1
position: 27949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:31025-31108:1:exon

position:31025:1
position: 31025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31108:1
position: 31108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:33569-33699:1:exon

position:33569:1
position: 33569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33699:1
position: 33699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:36505-36622:1:exon

position:36505:1
position: 36505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36622:1
position: 36622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:39956-40108:1:exon

position:39956:1
position: 39956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40108:1
position: 40108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:40886-41185:1:exon

position:40886:1
position: 40886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41185:1
position: 41185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:42603-42823:1:exon

position:42603:1
position: 42603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42823:1
position: 42823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:43650-43733:1:exon

position:43650:1
position: 43650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43733:1
position: 43733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:44519-44567:1:exon

position:44519:1
position: 44519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44567:1
position: 44567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:46014-46098:1:exon

position:46014:1
position: 46014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46098:1
position: 46098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:49117-49269:1:exon

position:49117:1
position: 49117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49269:1
position: 49269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:50925-51072:1:exon

position:50925:1
position: 50925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51072:1
position: 51072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:51732-51809:1:exon

position:51732:1
position: 51732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51809:1
position: 51809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:52948-53068:1:exon

position:52948:1
position: 52948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53068:1
position: 53068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:55736-55831:1:exon

position:55736:1
position: 55736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55831:1
position: 55831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:65349-65476:1:exon

position:65349:1
position: 65349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65476:1
position: 65476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:66886-67026:1:exon

position:66886:1
position: 66886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67026:1
position: 67026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:68158-68272:1:exon

position:68158:1
position: 68158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68272:1
position: 68272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:70459-70545:1:exon

position:70459:1
position: 70459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70545:1
position: 70545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:71273-71341:1:exon

position:71273:1
position: 71273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71341:1
position: 71341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:72275-72490:1:exon

position:72275:1
position: 72275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72490:1
position: 72490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:73296-73404:1:exon

position:73296:1
position: 73296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73404:1
position: 73404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:74199-74330:1:exon

position:74199:1
position: 74199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74330:1
position: 74330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:74927-75000:1:exon

position:74927:1
position: 74927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75000:1
position: 75000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:76624-76989:1:exon

position:76624:1
position: 76624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968931
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative PIP5K1A and PSMD4-like protein
translation: MAAEGSGASTELRLWYWQLLERVRGLSSRRAPSNEVAGSSHSMQLKKIGHRGVDSTGETTYKKTTSSALRGAIQLGITHTVGSLSTKPERDVLMQDFYVVESIFFPREGSNLTPAHHYSDFRFKTYAPVAFRYFRELFGIRPDDYLYSLCNEPLFELSNPGASGSVFYVSADDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFFGLYCIQSEGNNIRLVVMNNLLPRVMKMHLKYDLKGSTYKRRASQKERDKSRPTFKDLDFLHDTPDGLYLDTDMHSALCKTIQRDCLVLQSFKIMDYSLLVGVHNMDIARRERETERQQGSSDVGHSDLRRPVGQRSLYSTAYEAIQGESRLGDTNETDEQMGGIPARNSKGESLMLYIGIIDILQSYRFIKKLEHSWKALVHDGDTVSVHRPGFYAERFQRFMCSTVFKKIPLKPSPSKKSRLGMTSVRRPATGGSGQPPSSLTEESKGQVPTKEITQAVIEPGAYQGRPDILPRTPPLDEAASNSAATTLSSSSLAEPGALDSTAANSPVTRPPGLDTHATDETKQYPNALAISSVESMPPIISEPASGIPLSELSVASKSVEGTRCHDTLLETEICFFLEGRYWICSSPVLPRLPCLPKPPEANSKDVKGPRGHAVNQPLIGENSDQWAARSRRAEDRWRSFEMVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANNCEVLTTLTPDTGRILSKLHAVQPTGKISFCTGIRVAHLALKHRQGKNHKTRIIVFVGSPVEDNEKDLVKLAKRLKKEKVNVDIVNFGEEEANTDKLTAFINALNGKDGTGSHLVTVPPGPSLADALISSPILAGEGGTMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAAVSAVEAGIVTPTGDEPDDALLKMSINQQESPETGLPDISSMTEEEQIAYAMQMSLQAAEFGSAADLSSMDAGTAMDTSEATAKEEDNYDVMEDPEFLQSVLENLPGVDPNNEAIRNAMGSLQSQTSKDGKKDKEEEKK
SIO_010081: LOC116968931
subclass of: SO_0000673
so part of: LOC116968931
location: join(21559..21589,24468..24509,27918..27949,31025..31108,33569..33699,36505..36622,39956..40108,40886..41185,42603..42823,43650..43733,44519..44567,46014..46098,49117..49269,50925..51072,51732..51809,52948..53068,55736..55831,65349..65476,66886..67026,68158..68272,70459..70545,71273..71341,72275..72490,73296..73404,74199..74330,74927..75000,76624..76791)
location: region:21559-76791:1
so has part: feature:21559-21589:1:exon
so has part: feature:24468-24509:1:exon
so has part: feature:27918-27949:1:exon
so has part: feature:31025-31108:1:exon
so has part: feature:33569-33699:1:exon
so has part: feature:36505-36622:1:exon
so has part: feature:39956-40108:1:exon
so has part: feature:40886-41185:1:exon
so has part: feature:42603-42823:1:exon
so has part: feature:43650-43733:1:exon
so has part: feature:44519-44567:1:exon
so has part: feature:46014-46098:1:exon
so has part: feature:49117-49269:1:exon
so has part: feature:50925-51072:1:exon
so has part: feature:51732-51809:1:exon
so has part: feature:52948-53068:1:exon
so has part: feature:55736-55831:1:exon
so has part: feature:65349-65476:1:exon
so has part: feature:66886-67026:1:exon
so has part: feature:68158-68272:1:exon
so has part: feature:70459-70545:1:exon
so has part: feature:71273-71341:1:exon
so has part: feature:72275-72490:1:exon
so has part: feature:73296-73404:1:exon
so has part: feature:74199-74330:1:exon
so has part: feature:74927-75000:1:exon
so has part: feature:76624-76791:1:exon

XP_032871817.1
type: Protein
SIO_000068: ncbiprotein

position:21559:1
position: 21559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76791:1
position: 76791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21559-21589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24468-24509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27918-27949:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31025-31108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33569-33699:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36505-36622:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:39956-40108:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:40886-41185:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:42603-42823:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:43650-43733:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44519-44567:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:46014-46098:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:49117-49269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:50925-51072:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:51732-51809:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:52948-53068:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:55736-55831:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:65349-65476:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:66886-67026:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:68158-68272:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:70459-70545:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:71273-71341:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:72275-72490:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:73296-73404:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:74199-74330:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:74927-75000:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:76624-76791:1:exon

prune1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: prune1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 82239..97943
location: region:82239-97943:1
so has part: feature:82239-97943:1:exon
subclass of: SO_0000010

116968871
type: Gene
SIO_000068: ncbigene

position:82239:1
position: 82239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97943:1
position: 97943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82239-97943:1:exon

prune1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: prune1
product: prune exopolyphosphatase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_033015844.1
SIO_010081: prune1
subclass of: SO_0000673
so part of: prune1
location: join(82239..82358,84215..84319,85966..86171,87219..87403,89553..89711,91975..92069,93940..94098,95636..97943)
location: region:82239-97943:1
so has part: feature:82239-82358:1:exon
so has part: feature:84215-84319:1:exon
so has part: feature:85966-86171:1:exon
so has part: feature:87219-87403:1:exon
so has part: feature:89553-89711:1:exon
so has part: feature:91975-92069:1:exon
so has part: feature:93940-94098:1:exon
so has part: feature:95636-97943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82239-82358:1:exon

position:82358:1
position: 82358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:84215-84319:1:exon

position:84215:1
position: 84215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84319:1
position: 84319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:85966-86171:1:exon

position:85966:1
position: 85966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86171:1
position: 86171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87219-87403:1:exon

position:87219:1
position: 87219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87403:1
position: 87403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:89553-89711:1:exon

position:89553:1
position: 89553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89711:1
position: 89711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91975-92069:1:exon

position:91975:1
position: 91975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92069:1
position: 92069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:93940-94098:1:exon

position:93940:1
position: 93940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94098:1
position: 94098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:95636-97943:1:exon

position:95636:1
position: 95636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

prune1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: prune1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exopolyphosphatase PRUNE1
translation: MEAMLRGSRAALELHGRDAPRVHIVLGNEACDLDSMVSAIVLAYFLTKTSLEQKTAFVPILNIPRSEFPLRGECTFLLRESQLSEDLLIFRDEIDLQSLHKEGRLQLTLVDHNVLSRADADLESAVTEVIDHRPLERPFSPGCVVTCEPVGSCSTLVTERIVQRAPDILDKELAFLLRSTIVLDCIDMASAAGKVTPKDSEYVAVLDSRFHDLPPSNTVFEALQEAKFDVRGLTTEQMLRKDLKAAFGGDVRLAISAVFLTLEEFLARPRVKEELEDFCRTRGYDVLVIMTVSFNEKKEPSRQLAVYSPCSHFRELVSCALEKSEAPSLQLLPMYSPSSEIAAYSQGNRLASRKKVLPIIEILLKALETKGATAMHGCHGWKETSNIAQMVPTSCAEDICQDEDLQLPPTPMNSLVDGCPLDGGLPKLTPEDILEKINQMPGKRLAGTPCSDSH
SIO_010081: prune1
subclass of: SO_0000673
so part of: prune1
location: join(82320..82358,84215..84319,85966..86171,87219..87403,89553..89711,91975..92069,93940..94098,95636..96052)
location: region:82320-96052:1
so has part: feature:82320-82358:1:exon
so has part: feature:84215-84319:1:exon
so has part: feature:85966-86171:1:exon
so has part: feature:87219-87403:1:exon
so has part: feature:89553-89711:1:exon
so has part: feature:91975-92069:1:exon
so has part: feature:93940-94098:1:exon
so has part: feature:95636-96052:1:exon

XP_032871735.1
type: Protein
SIO_000068: ncbiprotein

position:82320:1
position: 82320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96052:1
position: 96052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82320-82358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84215-84319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85966-86171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87219-87403:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89553-89711:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91975-92069:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93940-94098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:95636-96052:1:exon

LOC116968911
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968911
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 101919..130178
location: region:101919-130178:1
so has part: feature:101919-130178:1:exon
subclass of: SO_0000010

116968911
type: Gene
SIO_000068: ncbigene

position:101919:1
position: 101919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130178:1
position: 130178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101919-130178:1:exon

LOC116968911
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968911
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033015893.1
SIO_010081: LOC116968911
subclass of: SO_0000673
so part of: LOC116968911
location: join(101919..102129,112954..113049,114336..114406,116204..116425,119095..119268,120492..120594,121764..121895,122635..122721,123750..123848,127543..130178)
location: region:101919-130178:1
so has part: feature:101919-102129:1:exon
so has part: feature:112954-113049:1:exon
so has part: feature:114336-114406:1:exon
so has part: feature:116204-116425:1:exon
so has part: feature:119095-119268:1:exon
so has part: feature:120492-120594:1:exon
so has part: feature:121764-121895:1:exon
so has part: feature:122635-122721:1:exon
so has part: feature:123750-123848:1:exon
so has part: feature:127543-130178:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101919-102129:1:exon

position:102129:1
position: 102129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:112954-113049:1:exon

position:112954:1
position: 112954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113049:1
position: 113049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:114336-114406:1:exon

position:114336:1
position: 114336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114406:1
position: 114406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:116204-116425:1:exon

position:116204:1
position: 116204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116425:1
position: 116425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:119095-119268:1:exon

position:119095:1
position: 119095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119268:1
position: 119268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:120492-120594:1:exon

position:120492:1
position: 120492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120594:1
position: 120594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:121764-121895:1:exon

position:121764:1
position: 121764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121895:1
position: 121895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:122635-122721:1:exon

position:122635:1
position: 122635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122721:1
position: 122721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:123750-123848:1:exon

position:123750:1
position: 123750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123848:1
position: 123848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:127543-130178:1:exon

position:127543:1
position: 127543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968911
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968911
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL2/adenovirus E1B 19 kDa protein-interacting protein 2-like
translation: MNSPLVVNNAEERQDKRHKGKGDTAEQNGSLQKEQLESPNSAEIQIEDMELREEWQDEEFPKPLPEDNDALIEDDLNANAEVNRPVAPKSLQLYGNKKRLLAPAISLNLEGNEEVTRSEERTPDELEGDSYDINVDDLETPSESESFELPENGNEFEWEDDLPRVFRSLSDTDSFQGHVTDEETEDGKLWRVFHIGEQEYRVDMAVVDPYKAVISHGGCFGENLTAIILFSSCYLPESSRPDYENVMENLFRYVIGTLELLVAENYIIVYLNGATTRNRVPSISWLKQCYQTIDRRLRKNLKSLIVVHPSWFIKVILAITRPFISTKFSRKVRFVSSLQELSKLIPMQHVHIPECIKELDEELNGNSET
SIO_010081: LOC116968911
subclass of: SO_0000673
so part of: LOC116968911
location: join(102041..102129,112954..113049,114336..114406,116204..116425,119095..119268,120492..120594,121764..121895,122635..122721,123750..123848,127543..127579)
location: region:102041-127579:1
so has part: feature:102041-102129:1:exon
so has part: feature:112954-113049:1:exon
so has part: feature:114336-114406:1:exon
so has part: feature:116204-116425:1:exon
so has part: feature:119095-119268:1:exon
so has part: feature:120492-120594:1:exon
so has part: feature:121764-121895:1:exon
so has part: feature:122635-122721:1:exon
so has part: feature:123750-123848:1:exon
so has part: feature:127543-127579:1:exon

XP_032871784.1
type: Protein
SIO_000068: ncbiprotein

position:102041:1
position: 102041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127579:1
position: 127579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102041-102129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112954-113049:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114336-114406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:116204-116425:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119095-119268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120492-120594:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:121764-121895:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:122635-122721:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:123750-123848:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:127543-127579:1:exon

cdc42se1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: cdc42se1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(139498..160819)
location: region:139498-160819:-1
so has part: feature:139498-160819:-1:exon
subclass of: SO_0000010

116968914
type: Gene
SIO_000068: ncbigene

position:139498:-1
position: 139498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160819:-1
position: 160819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139498-160819:-1:exon

cdc42se1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cdc42se1
product: CDC42 small effector 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033015899.1
SIO_010081: cdc42se1
subclass of: SO_0000673
so part of: cdc42se1
location: complement(join(139498..143843,146229..146332,149428..149532,153694..153975,160626..160819))
location: region:139498-160819:-1
so has part: feature:160626-160819:-1:exon
so has part: feature:153694-153975:-1:exon
so has part: feature:149428-149532:-1:exon
so has part: feature:146229-146332:-1:exon
so has part: feature:139498-143843:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160626-160819:-1:exon

position:160626:-1
position: 160626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153694-153975:-1:exon

position:153694:-1
position: 153694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153975:-1
position: 153975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:149428-149532:-1:exon

position:149428:-1
position: 149428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149532:-1
position: 149532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:146229-146332:-1:exon

position:146229:-1
position: 146229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146332:-1
position: 146332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:139498-143843:-1:exon

position:143843:-1
position: 143843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cdc42se1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cdc42se1
product: CDC42 small effector 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033015900.1
SIO_010081: cdc42se1
subclass of: SO_0000673
so part of: cdc42se1
location: complement(join(139498..143843,146229..146332,149428..149532,153694..153978,160626..160819))
location: region:139498-160819:-1
so has part: feature:160626-160819:-1:exon
so has part: feature:153694-153978:-1:exon
so has part: feature:149428-149532:-1:exon
so has part: feature:146229-146332:-1:exon
so has part: feature:139498-143843:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160626-160819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:153694-153978:-1:exon

position:153978:-1
position: 153978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:149428-149532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146229-146332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139498-143843:-1:exon

cdc42se1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cdc42se1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDC42 small effector protein 1
translation: MSEFWLCFGCSEVEKAQPKKRKRIDRSMIGEPMNFVHLTHVGSGDMASQGFSKSGTVQERMKSKSGLVTNSATDTKRP
SIO_010081: cdc42se1
subclass of: SO_0000673
so part of: cdc42se1
location: complement(join(146255..146332,149428..149532,153694..153747))
location: region:146255-153747:-1
so has part: feature:153694-153747:-1:exon
so has part: feature:149428-149532:-1:exon
so has part: feature:146255-146332:-1:exon

XP_032871790.1
type: Protein
SIO_000068: ncbiprotein

position:146255:-1
position: 146255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153747:-1
position: 153747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153694-153747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149428-149532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146255-146332:-1:exon

cdc42se1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cdc42se1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDC42 small effector protein 1
translation: MSEFWLCFGCSEVEKAQPKKRKRIDRSMIGEPMNFVHLTHVGSGDMASQGFSKSGTVQERMKSKSGLVTNSATDTKRP
SIO_010081: cdc42se1
subclass of: SO_0000673
so part of: cdc42se1
location: complement(join(146255..146332,149428..149532,153694..153747))
location: region:146255-153747:-1
so has part: feature:153694-153747:-1:exon
so has part: feature:149428-149532:-1:exon
so has part: feature:146255-146332:-1:exon

XP_032871791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153694-153747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149428-149532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146255-146332:-1:exon

LOC116968915
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 165424..174562
location: region:165424-174562:1
so has part: feature:165424-174562:1:exon
subclass of: SO_0000011

116968915
type: Gene
SIO_000068: ncbigene

position:165424:1
position: 165424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174562:1
position: 174562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165424-174562:1:exon

LOC116968915
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968915
product: uncharacterized LOC116968915
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XR_004410553.1
SIO_010081: LOC116968915
subclass of: SO_0000673
so part of: LOC116968915
location: join(165424..165649,173458..174562)
location: region:165424-174562:1
so has part: feature:165424-165649:1:exon
so has part: feature:173458-174562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165424-165649:1:exon

position:165649:1
position: 165649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:173458-174562:1:exon

position:173458:1
position: 173458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gabpb2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: gabpb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 180042..191656
location: region:180042-191656:1
so has part: feature:180042-191656:1:exon
subclass of: SO_0000010

116968912
type: Gene
SIO_000068: ncbigene

position:180042:1
position: 180042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191656:1
position: 191656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180042-191656:1:exon

gabpb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gabpb2
product: GA binding protein transcription factor subunit beta 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033015894.1
SIO_010081: gabpb2
subclass of: SO_0000673
so part of: gabpb2
location: join(180042..180280,183337..183444,184717..184884,186129..186323,188358..188490,188902..189081,189674..189777,191181..191656)
location: region:180042-191656:1
so has part: feature:180042-180280:1:exon
so has part: feature:183337-183444:1:exon
so has part: feature:184717-184884:1:exon
so has part: feature:186129-186323:1:exon
so has part: feature:188358-188490:1:exon
so has part: feature:188902-189081:1:exon
so has part: feature:189674-189777:1:exon
so has part: feature:191181-191656:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180042-180280:1:exon

position:180280:1
position: 180280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183337-183444:1:exon

position:183337:1
position: 183337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183444:1
position: 183444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:184717-184884:1:exon

position:184717:1
position: 184717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184884:1
position: 184884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:186129-186323:1:exon

position:186129:1
position: 186129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186323:1
position: 186323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:188358-188490:1:exon

position:188358:1
position: 188358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188490:1
position: 188490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:188902-189081:1:exon

position:188902:1
position: 188902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189081:1
position: 189081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:189674-189777:1:exon

position:189674:1
position: 189674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189777:1
position: 189777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:191181-191656:1:exon

position:191181:1
position: 191181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gabpb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gabpb2
product: GA binding protein transcription factor subunit beta 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015895.1
SIO_010081: gabpb2
subclass of: SO_0000673
so part of: gabpb2
location: join(181110..181288,183332..183444,184717..184884,186129..186323,188358..188490,188902..189081,189674..189777,191181..191656)
location: region:181110-191656:1
so has part: feature:181110-181288:1:exon
so has part: feature:183332-183444:1:exon
so has part: feature:184717-184884:1:exon
so has part: feature:186129-186323:1:exon
so has part: feature:188358-188490:1:exon
so has part: feature:188902-189081:1:exon
so has part: feature:189674-189777:1:exon
so has part: feature:191181-191656:1:exon

position:181110:1
position: 181110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181110-181288:1:exon

position:181288:1
position: 181288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183332-183444:1:exon

position:183332:1
position: 183332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:184717-184884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186129-186323:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188358-188490:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188902-189081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189674-189777:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191181-191656:1:exon

gabpb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gabpb2
product: GA binding protein transcription factor subunit beta 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033015897.1
SIO_010081: gabpb2
subclass of: SO_0000673
so part of: gabpb2
location: join(182173..182478,183337..183444,184717..184884,186129..186323,188358..188490,188902..189081,189674..189777,191181..191656)
location: region:182173-191656:1
so has part: feature:182173-182478:1:exon
so has part: feature:183337-183444:1:exon
so has part: feature:184717-184884:1:exon
so has part: feature:186129-186323:1:exon
so has part: feature:188358-188490:1:exon
so has part: feature:188902-189081:1:exon
so has part: feature:189674-189777:1:exon
so has part: feature:191181-191656:1:exon

position:182173:1
position: 182173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182173-182478:1:exon

position:182478:1
position: 182478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183337-183444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:184717-184884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186129-186323:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188358-188490:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188902-189081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189674-189777:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191181-191656:1:exon

gabpb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gabpb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein subunit beta-2
translation: MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAAEGHASIVELLIRNNADINAKDMLKMTALHWAVEHDHREVVEILLKYGADVHALSKFDKNAFDIALDKHNPELVAILQEAMHNQVNTNPERTNSVAITTPQFIIAPSGVMSLVTSASTKTTSMMTEEVVTADSVDSAIQQVVGSGGQRVITIVTDGGVQLGNLHAGLGSGQQFIVTMQDGQQVLTVPASHVEEETIITEEMSIRKQCLEAVLNHSEKDMNDCMEREQLQQQLHEANRKAQEYRQQLVKKEQEADEYRMRLEAIARLHTVEEITVVEEVTEDGTVPIITMTTEVEGPETTIETMEQPIDMATETVTS
SIO_010081: gabpb2
subclass of: SO_0000673
so part of: gabpb2
location: join(183337..183444,184717..184884,186129..186323,188358..188490,188902..189081,189674..189777,191181..191480)
location: region:183337-191480:1
so has part: feature:183337-183444:1:exon
so has part: feature:184717-184884:1:exon
so has part: feature:186129-186323:1:exon
so has part: feature:188358-188490:1:exon
so has part: feature:188902-189081:1:exon
so has part: feature:189674-189777:1:exon
so has part: feature:191181-191480:1:exon

XP_032871785.1
type: Protein
SIO_000068: ncbiprotein

position:191480:1
position: 191480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183337-183444:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184717-184884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186129-186323:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188358-188490:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188902-189081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189674-189777:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191181-191480:1:exon

gabpb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gabpb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein subunit beta-2
translation: MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAAEGHASIVELLIRNNADINAKDMLKMTALHWAVEHDHREVVEILLKYGADVHALSKFDKNAFDIALDKHNPELVAILQEAMHNQVNTNPERTNSVAITTPQFIIAPSGVMSLVTSASTKTTSMMTEEVVTADSVDSAIQQVVGSGGQRVITIVTDGGVQLGNLHAGLGSGQQFIVTMQDGQQVLTVPASHVEEETIITEEMSIRKQCLEAVLNHSEKDMNDCMEREQLQQQLHEANRKAQEYRQQLVKKEQEADEYRMRLEAIARLHTVEEITVVEEVTEDGTVPIITMTTEVEGPETTIETMEQPIDMATETVTS
SIO_010081: gabpb2
subclass of: SO_0000673
so part of: gabpb2
location: join(183337..183444,184717..184884,186129..186323,188358..188490,188902..189081,189674..189777,191181..191480)
location: region:183337-191480:1
so has part: feature:183337-183444:1:exon
so has part: feature:184717-184884:1:exon
so has part: feature:186129-186323:1:exon
so has part: feature:188358-188490:1:exon
so has part: feature:188902-189081:1:exon
so has part: feature:189674-189777:1:exon
so has part: feature:191181-191480:1:exon

XP_032871786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183337-183444:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184717-184884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186129-186323:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188358-188490:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188902-189081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189674-189777:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191181-191480:1:exon

gabpb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gabpb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GA-binding protein subunit beta-2
translation: MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAAEGHASIVELLIRNNADINAKDMLKMTALHWAVEHDHREVVEILLKYGADVHALSKFDKNAFDIALDKHNPELVAILQEAMHNQVNTNPERTNSVAITTPQFIIAPSGVMSLVTSASTKTTSMMTEEVVTADSVDSAIQQVVGSGGQRVITIVTDGGVQLGNLHAGLGSGQQFIVTMQDGQQVLTVPASHVEEETIITEEMSIRKQCLEAVLNHSEKDMNDCMEREQLQQQLHEANRKAQEYRQQLVKKEQEADEYRMRLEAIARLHTVEEITVVEEVTEDGTVPIITMTTEVEGPETTIETMEQPIDMATETVTS
SIO_010081: gabpb2
subclass of: SO_0000673
so part of: gabpb2
location: join(183337..183444,184717..184884,186129..186323,188358..188490,188902..189081,189674..189777,191181..191480)
location: region:183337-191480:1
so has part: feature:183337-183444:1:exon
so has part: feature:184717-184884:1:exon
so has part: feature:186129-186323:1:exon
so has part: feature:188358-188490:1:exon
so has part: feature:188902-189081:1:exon
so has part: feature:189674-189777:1:exon
so has part: feature:191181-191480:1:exon

XP_032871788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183337-183444:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184717-184884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186129-186323:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188358-188490:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188902-189081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189674-189777:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191181-191480:1:exon

trnag-ucc
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trnag-ucc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 198364..198435
location: region:198364-198435:1
so has part: feature:198364-198435:1:exon
subclass of: SO_0000663

116968942
type: Gene
SIO_000068: ncbigene

position:198364:1
position: 198364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198435:1
position: 198435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198364-198435:1:exon

trnag-ucc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 386614
gene: trnag-ucc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon UCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:198397..198399,aa:Gly,seq:tcc)
SIO_010081: trnag-ucc
subclass of: SO_0000673
so part of: trnag-ucc
location: 198364..198435
location: region:198364-198435:1
so has part: feature:198364-198435:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198364-198435:1:exon

ssr2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ssr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(199771..203659)
location: region:199771-203659:-1
so has part: feature:199771-203659:-1:exon
subclass of: SO_0000010

116968913
type: Gene
SIO_000068: ncbigene

position:199771:-1
position: 199771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203659:-1
position: 203659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199771-203659:-1:exon

ssr2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ssr2
product: signal sequence receptor subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033015898.1
SIO_010081: ssr2
subclass of: SO_0000673
so part of: ssr2
location: complement(join(199771..200175,200592..200669,201040..201148,201784..201882,202526..202683,203572..203659))
location: region:199771-203659:-1
so has part: feature:203572-203659:-1:exon
so has part: feature:202526-202683:-1:exon
so has part: feature:201784-201882:-1:exon
so has part: feature:201040-201148:-1:exon
so has part: feature:200592-200669:-1:exon
so has part: feature:199771-200175:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203572-203659:-1:exon

position:203572:-1
position: 203572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:202526-202683:-1:exon

position:202526:-1
position: 202526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202683:-1
position: 202683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:201784-201882:-1:exon

position:201784:-1
position: 201784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201882:-1
position: 201882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:201040-201148:-1:exon

position:201040:-1
position: 201040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201148:-1
position: 201148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:200592-200669:-1:exon

position:200592:-1
position: 200592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200669:-1
position: 200669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:199771-200175:-1:exon

position:200175:-1
position: 200175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ssr2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ssr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocon-associated protein subunit beta
translation: MRLLLIGVCAVLLAAAGAEEGARILSSKSLLNKYAVEGRDLTLQYNVYNVGSSAALEVELSDDSFPPEDFGIVSGMLTVKWDRIAPASNVTHTVVLRPLKAGYFNFTSATVSYLAQEGGPVVVGYTSAPGQGGILAQREFDRRFSPHYLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKSKKN
SIO_010081: ssr2
subclass of: SO_0000673
so part of: ssr2
location: complement(join(200065..200175,200592..200669,201040..201148,201784..201882,202526..202683))
location: region:200065-202683:-1
so has part: feature:202526-202683:-1:exon
so has part: feature:201784-201882:-1:exon
so has part: feature:201040-201148:-1:exon
so has part: feature:200592-200669:-1:exon
so has part: feature:200065-200175:-1:exon

XP_032871789.1
type: Protein
SIO_000068: ncbiprotein

position:200065:-1
position: 200065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202526-202683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201784-201882:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201040-201148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200592-200669:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:200065-200175:-1:exon

cct3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: cct3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 205875..222449
location: region:205875-222449:1
so has part: feature:205875-222449:1:exon
subclass of: SO_0000010

116968932
type: Gene
SIO_000068: ncbigene

position:205875:1
position: 205875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222449:1
position: 222449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205875-222449:1:exon

cct3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cct3
product: chaperonin containing TCP1 subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033015927.1
SIO_010081: cct3
subclass of: SO_0000673
so part of: cct3
location: join(205875..205996,206546..206607,208886..208936,209115..209177,210080..210176,210565..210682,211381..211567,211931..212080,212998..213130,216173..216254,217000..217180,217518..217763,218488..218619,222131..222449)
location: region:205875-222449:1
so has part: feature:205875-205996:1:exon
so has part: feature:206546-206607:1:exon
so has part: feature:208886-208936:1:exon
so has part: feature:209115-209177:1:exon
so has part: feature:210080-210176:1:exon
so has part: feature:210565-210682:1:exon
so has part: feature:211381-211567:1:exon
so has part: feature:211931-212080:1:exon
so has part: feature:212998-213130:1:exon
so has part: feature:216173-216254:1:exon
so has part: feature:217000-217180:1:exon
so has part: feature:217518-217763:1:exon
so has part: feature:218488-218619:1:exon
so has part: feature:222131-222449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205875-205996:1:exon

position:205996:1
position: 205996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:206546-206607:1:exon

position:206546:1
position: 206546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206607:1
position: 206607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:208886-208936:1:exon

position:208886:1
position: 208886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208936:1
position: 208936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:209115-209177:1:exon

position:209115:1
position: 209115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209177:1
position: 209177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:210080-210176:1:exon

position:210080:1
position: 210080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210176:1
position: 210176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:210565-210682:1:exon

position:210565:1
position: 210565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210682:1
position: 210682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:211381-211567:1:exon

position:211381:1
position: 211381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211567:1
position: 211567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:211931-212080:1:exon

position:211931:1
position: 211931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212080:1
position: 212080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:212998-213130:1:exon

position:212998:1
position: 212998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213130:1
position: 213130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:216173-216254:1:exon

position:216173:1
position: 216173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216254:1
position: 216254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:217000-217180:1:exon

position:217000:1
position: 217000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217180:1
position: 217180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:217518-217763:1:exon

position:217518:1
position: 217518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217763:1
position: 217763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:218488-218619:1:exon

position:218488:1
position: 218488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218619:1
position: 218619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:222131-222449:1:exon

position:222131:1
position: 222131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cct3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cct3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 1 subunit gamma
translation: MLGRQVVVLSQNVKRESGRRVQQGNISAAKSIADVIRTCLGPRAMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEQYLEQQMHPSVIIGAYHQALDDMITTLEELSTPVDINNRDLMLKIINSAINTKVNNLQLDLACNIALDAVKTVELDENGRKEIDIKKYAKIEKVPGGFIHDSCVLRGVMLNKDVTHSRMRRHIKSPRILLLDCSLEYKKGESQTDIEITREEDFTHILQMEENYIQQICEDIIRLKPDLLFTEKGISDLAIHFLMKANITAIRRIRKSDSNRIARACGARVVSRTDELTEEDIGTRAGQFEVKKIGDEYFAFVTECKDPKACTILLRGASKEILAEVERNLQDAMQVTRNVLLDPRLVPGGGAVEMAVAHTLIEKSKTMTGVEQWPYRAVANALEVIPRTLIQNCGASTIRLLTSLRAKHTQEGCQTWGVNGETGALADMKELGIWEPLTVKSQTFKTSVETAILLLRIDDIVSGHKSKKDSNQGGEGDAA
SIO_010081: cct3
subclass of: SO_0000673
so part of: cct3
location: join(205969..205996,206546..206607,208886..208936,209115..209177,210080..210176,210565..210682,211381..211567,211931..212080,212998..213130,216173..216254,217000..217180,217518..217763,218488..218619,222131..222223)
location: region:205969-222223:1
so has part: feature:205969-205996:1:exon
so has part: feature:206546-206607:1:exon
so has part: feature:208886-208936:1:exon
so has part: feature:209115-209177:1:exon
so has part: feature:210080-210176:1:exon
so has part: feature:210565-210682:1:exon
so has part: feature:211381-211567:1:exon
so has part: feature:211931-212080:1:exon
so has part: feature:212998-213130:1:exon
so has part: feature:216173-216254:1:exon
so has part: feature:217000-217180:1:exon
so has part: feature:217518-217763:1:exon
so has part: feature:218488-218619:1:exon
so has part: feature:222131-222223:1:exon

XP_032871818.1
type: Protein
SIO_000068: ncbiprotein

position:205969:1
position: 205969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222223:1
position: 222223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205969-205996:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206546-206607:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208886-208936:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209115-209177:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:210080-210176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:210565-210682:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211381-211567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:211931-212080:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:212998-213130:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:216173-216254:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217000-217180:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217518-217763:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:218488-218619:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:222131-222223:1:exon

LOC116968933
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968933
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 213126..213509
location: region:213126-213509:1
so has part: feature:213126-213509:1:exon
subclass of: SO_0000011

116968933
type: Gene
SIO_000068: ncbigene

position:213126:1
position: 213126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213509:1
position: 213509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213126-213509:1:exon

LOC116968933
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968933
product: uncharacterized LOC116968933
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004410556.1
SIO_010081: LOC116968933
subclass of: SO_0000673
so part of: LOC116968933
location: join(213126..213236,213362..213509)
location: region:213126-213509:1
so has part: feature:213126-213236:1:exon
so has part: feature:213362-213509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213126-213236:1:exon

position:213236:1
position: 213236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:213362-213509:1:exon

position:213362:1
position: 213362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ttc24
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ttc24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(823499..845286)
location: region:823499-845286:-1
so has part: feature:823499-845286:-1:exon
subclass of: SO_0000010

116968910
type: Gene
SIO_000068: ncbigene

position:823499:-1
position: 823499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845286:-1
position: 845286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823499-845286:-1:exon

ttc24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ttc24
product: tetratricopeptide repeat domain 24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033015892.1
SIO_010081: ttc24
subclass of: SO_0000673
so part of: ttc24
location: complement(join(823499..824376,825345..825399,826141..826223,828414..828597,829395..829543,831797..831903,832466..832585,833705..833826,836932..837060,840130..840345,842388..843137,845192..845286))
location: region:823499-845286:-1
so has part: feature:845192-845286:-1:exon
so has part: feature:842388-843137:-1:exon
so has part: feature:840130-840345:-1:exon
so has part: feature:836932-837060:-1:exon
so has part: feature:833705-833826:-1:exon
so has part: feature:832466-832585:-1:exon
so has part: feature:831797-831903:-1:exon
so has part: feature:829395-829543:-1:exon
so has part: feature:828414-828597:-1:exon
so has part: feature:826141-826223:-1:exon
so has part: feature:825345-825399:-1:exon
so has part: feature:823499-824376:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:845192-845286:-1:exon

position:845192:-1
position: 845192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:842388-843137:-1:exon

position:842388:-1
position: 842388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843137:-1
position: 843137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:840130-840345:-1:exon

position:840130:-1
position: 840130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840345:-1
position: 840345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:836932-837060:-1:exon

position:836932:-1
position: 836932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837060:-1
position: 837060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:833705-833826:-1:exon

position:833705:-1
position: 833705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833826:-1
position: 833826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:832466-832585:-1:exon

position:832466:-1
position: 832466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832585:-1
position: 832585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:831797-831903:-1:exon

position:831797:-1
position: 831797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831903:-1
position: 831903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:829395-829543:-1:exon

position:829395:-1
position: 829395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829543:-1
position: 829543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:828414-828597:-1:exon

position:828414:-1
position: 828414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828597:-1
position: 828597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:826141-826223:-1:exon

position:826141:-1
position: 826141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826223:-1
position: 826223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:825345-825399:-1:exon

position:825345:-1
position: 825345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825399:-1
position: 825399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:823499-824376:-1:exon

position:824376:-1
position: 824376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ttc24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ttc24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 24
translation: MASDLEPAPCASPEGKVMMTMKKKKKRKKQPSASQGDEERQEAQAEIEGLTKAGSLALAQERPEEALASFKKAFLMSLDVGEQSVQRACAFNLGAAYVASGRPAKGLDFLLRSQPAEGDERQGDLYFNLGIAQEELGDLESATEHYEQALAHYRARQPQGEADTCMKLASCRARAGHEAQAARCFLRAGRLYRQGGGPDMAAVAMNEAAGHMLQCRHFTATQITEVLNECRTVCGNIQNKALLGKLYNDIGLSYSQLKIFSLAAECFEQALPYSRRDCTEPRKEAVILQNLGAVYNTTGDFSRALTFHQRAAALHGSLGNRNAQGQCFCNLAYACSQLGDHEEAAEGYLHALQAFKDTDDFHGQWQACEGLGAARFRLGDPEKATLYYKLALAALAKSQESTSSAQERIVNKLADAIQYKLSLNSVLPHAGGILPAMPLKYLPGSFPRTNPLCGPVAVTQGQGKGKQSQRRQLVQPAEEDRVPGDRVGCPETGWQMRNGRRHRTDPSPPAAETGPALGNKPTGSDPAGMESGAAAGSNGRSLPQTGTAEDAEKGVVTAVAEGPGQGEEEEVEVEEGRWISPAQANRNLNNTYLQPDPTYMNNPQLGTLKTADKSDHFYETCRLRQTQAADEGVASTSQESGNSANGAEPEHPKWRRKWESRMCSLM
SIO_010081: ttc24
subclass of: SO_0000673
so part of: ttc24
location: complement(join(824271..824376,825345..825399,826141..826223,828414..828597,829395..829543,831797..831903,832466..832585,833705..833826,836932..837060,840130..840345,842388..843117))
location: region:824271-843117:-1
so has part: feature:842388-843117:-1:exon
so has part: feature:840130-840345:-1:exon
so has part: feature:836932-837060:-1:exon
so has part: feature:833705-833826:-1:exon
so has part: feature:832466-832585:-1:exon
so has part: feature:831797-831903:-1:exon
so has part: feature:829395-829543:-1:exon
so has part: feature:828414-828597:-1:exon
so has part: feature:826141-826223:-1:exon
so has part: feature:825345-825399:-1:exon
so has part: feature:824271-824376:-1:exon

XP_032871783.1
type: Protein
SIO_000068: ncbiprotein

position:824271:-1
position: 824271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843117:-1
position: 843117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842388-843117:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:840130-840345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:836932-837060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833705-833826:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832466-832585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831797-831903:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:829395-829543:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:828414-828597:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:826141-826223:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825345-825399:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824271-824376:-1:exon

iqgap3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: iqgap3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 845638..935266
location: region:845638-935266:1
so has part: feature:845638-935266:1:exon
subclass of: SO_0000010

116968870
type: Gene
SIO_000068: ncbigene

position:845638:1
position: 845638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935266:1
position: 935266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845638-935266:1:exon

iqgap3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: iqgap3
product: IQ motif containing GTPase activating protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033015843.1
SIO_010081: iqgap3
subclass of: SO_0000673
so part of: iqgap3
location: join(845638..845799,859023..859122,862266..862422,864216..864293,865723..865799,867885..867952,869639..869752,870675..870862,873608..873695,874884..875047,876753..876840,879181..879344,882965..883125,884553..884677,889209..889372,890617..890707,893324..893491,895469..895611,898619..898789,899832..899915,901632..901703,903876..903945,905823..906031,906484..906636,907400..907563,909288..909512,914642..914782,915524..915608,916736..916968,920121..920253,922123..922225,923307..923451,923810..923897,928633..928851,929401..929567,931267..931392,933205..933313,934729..935266)
location: region:845638-935266:1
so has part: feature:845638-845799:1:exon
so has part: feature:859023-859122:1:exon
so has part: feature:862266-862422:1:exon
so has part: feature:864216-864293:1:exon
so has part: feature:865723-865799:1:exon
so has part: feature:867885-867952:1:exon
so has part: feature:869639-869752:1:exon
so has part: feature:870675-870862:1:exon
so has part: feature:873608-873695:1:exon
so has part: feature:874884-875047:1:exon
so has part: feature:876753-876840:1:exon
so has part: feature:879181-879344:1:exon
so has part: feature:882965-883125:1:exon
so has part: feature:884553-884677:1:exon
so has part: feature:889209-889372:1:exon
so has part: feature:890617-890707:1:exon
so has part: feature:893324-893491:1:exon
so has part: feature:895469-895611:1:exon
so has part: feature:898619-898789:1:exon
so has part: feature:899832-899915:1:exon
so has part: feature:901632-901703:1:exon
so has part: feature:903876-903945:1:exon
so has part: feature:905823-906031:1:exon
so has part: feature:906484-906636:1:exon
so has part: feature:907400-907563:1:exon
so has part: feature:909288-909512:1:exon
so has part: feature:914642-914782:1:exon
so has part: feature:915524-915608:1:exon
so has part: feature:916736-916968:1:exon
so has part: feature:920121-920253:1:exon
so has part: feature:922123-922225:1:exon
so has part: feature:923307-923451:1:exon
so has part: feature:923810-923897:1:exon
so has part: feature:928633-928851:1:exon
so has part: feature:929401-929567:1:exon
so has part: feature:931267-931392:1:exon
so has part: feature:933205-933313:1:exon
so has part: feature:934729-935266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:845638-845799:1:exon

position:845799:1
position: 845799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:859023-859122:1:exon

position:859023:1
position: 859023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859122:1
position: 859122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:862266-862422:1:exon

position:862266:1
position: 862266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862422:1
position: 862422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:864216-864293:1:exon

position:864216:1
position: 864216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864293:1
position: 864293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:865723-865799:1:exon

position:865723:1
position: 865723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865799:1
position: 865799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:867885-867952:1:exon

position:867885:1
position: 867885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867952:1
position: 867952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:869639-869752:1:exon

position:869639:1
position: 869639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869752:1
position: 869752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:870675-870862:1:exon

position:870675:1
position: 870675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870862:1
position: 870862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:873608-873695:1:exon

position:873608:1
position: 873608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873695:1
position: 873695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:874884-875047:1:exon

position:874884:1
position: 874884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875047:1
position: 875047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:876753-876840:1:exon

position:876753:1
position: 876753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876840:1
position: 876840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:879181-879344:1:exon

position:879181:1
position: 879181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879344:1
position: 879344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:882965-883125:1:exon

position:882965:1
position: 882965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883125:1
position: 883125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:884553-884677:1:exon

position:884553:1
position: 884553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884677:1
position: 884677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:889209-889372:1:exon

position:889209:1
position: 889209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889372:1
position: 889372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:890617-890707:1:exon

position:890617:1
position: 890617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890707:1
position: 890707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:893324-893491:1:exon

position:893324:1
position: 893324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893491:1
position: 893491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:895469-895611:1:exon

position:895469:1
position: 895469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895611:1
position: 895611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:898619-898789:1:exon

position:898619:1
position: 898619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898789:1
position: 898789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:899832-899915:1:exon

position:899832:1
position: 899832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899915:1
position: 899915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:901632-901703:1:exon

position:901632:1
position: 901632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901703:1
position: 901703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:903876-903945:1:exon

position:903876:1
position: 903876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903945:1
position: 903945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:905823-906031:1:exon

position:905823:1
position: 905823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906031:1
position: 906031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:906484-906636:1:exon

position:906484:1
position: 906484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906636:1
position: 906636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:907400-907563:1:exon

position:907400:1
position: 907400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907563:1
position: 907563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:909288-909512:1:exon

position:909288:1
position: 909288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909512:1
position: 909512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:914642-914782:1:exon

position:914642:1
position: 914642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914782:1
position: 914782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:915524-915608:1:exon

position:915524:1
position: 915524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915608:1
position: 915608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:916736-916968:1:exon

position:916736:1
position: 916736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916968:1
position: 916968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:920121-920253:1:exon

position:920121:1
position: 920121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920253:1
position: 920253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:922123-922225:1:exon

position:922123:1
position: 922123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922225:1
position: 922225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:923307-923451:1:exon

position:923307:1
position: 923307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923451:1
position: 923451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:923810-923897:1:exon

position:923810:1
position: 923810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923897:1
position: 923897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:928633-928851:1:exon

position:928633:1
position: 928633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928851:1
position: 928851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:929401-929567:1:exon

position:929401:1
position: 929401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929567:1
position: 929567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:931267-931392:1:exon

position:931267:1
position: 931267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931392:1
position: 931392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:933205-933313:1:exon

position:933205:1
position: 933205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933313:1
position: 933313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:934729-935266:1:exon

position:934729:1
position: 934729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

iqgap3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: iqgap3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP3
translation: MANEVEPSGRRPCGYGLGSERLTAEEMDERRRQNIAYEYLCHLEEAKRWMEVCLDEELPPTTDLEESLRNGVFLAKLGHRFAPTVVPQRKIYDQEQLRYKATGLHFRHTDNINHWLNAMAKISLPSIFYPETTDIYDKKNIPRVVYCIHAFSLYLFKLGLAPQIQDLYGKVNFTEEEINNMKTELDKYGIQMPSFSKIGGILANELSVDEAAVHAAVIAINEAIDRGLVEQTLVALRNPSAMLVNLADSLAPVYQEILCQAKSEKSANARKRFDTYKAELTEGKDMYEELLTHAEIQGNINKVNVQAALEYVDEALEKSDVQALYSALQSPALNLHQVNRENTEWYMDQLLIDREQKALELGMVDPLEKEELQAAVHAANENASVHLSMMQSVARINAAVRKGIPAGTTKELMDPSAKLPEVYPFAGALYQRELAALQRQKPQGELTQEELYVAVEMLSAVALINRALEAGDVGAFWSSLFSPATGLTDVKDESVQRYFDALRGLKQQSGRNGETMLSWNSLQLCVRDVNSAMQEEHQQIAAIVLINEALDGGDPERTIAALLMPSAGLAALDFPAALRYHHVLAAAKRHKAKVTRDQAAMLWLEEIQEGIHKTNQDSQMARKMSLGVAAINQAIKEAKVSQTLRVLRSPELALCGVVLDCARAYQTELAVLVRVKVDMGDNRSPWVKHVLKDGSTYYFNLQRLEGSWERPQGFVQSSTQLNRAEIQSTVAAVTAVYNRERLWQANEGMIVGLQAHMKGYLVRNDLSDRKHFIRRQLPAIVKIQSHWRGCRQRRDYQTRLHHLHANTAYVIKIQSWVRMWQARRRYKARLQYFKRNIASVVKIQAFVRANKARGDYKMLVHAQNPPLNVVRKFAHLLDQSDYDFREEWELMQLREEVVQRIRSSRQLEQDLNVMDIKIGLLVKNRITLQEVVSHCKKLTRKNKEQLSDLMVIDKQKGLKGLSKEKREKLEAYQHLFYLLQTKPVYLAKLIFQMPQNRSTKFMESVIFSLYNYASNEREGYLLLGLFTTALREEIRSKVDRVREIVTGNPMVTRLVVSFYRNIRGQNALRDILGPVVKEVLQDKTLSIKTDPVDIYKCWVNQMESQSGQRSQLPYEVTMDQALTHPEVERRLDISIRNLRAATDKFLNAIISSVDKIPYGMRYTAKVLKSSLRERFPGATEEELLKVVGNLLYYRYMNPAVVAPDGFDIIDVTVGGGLHADHRRNLGSIAKLLQLAASGKTLEGENAQLRTMADYLLQSQQRFRAFFRAACNVPEPEERFNVDEYSEMVSLNKPVIYITAGELINTHKLLLQHQDSLSVEHSDPLHQLLEDLGDVPTVESLLGEGSVTINDAQEDHLAQLYKMEVSLTLSNKFDLCKSGNATSDTRGLLLSTKQLIVDVIRSQAGDSLTEILQTSASTDQVIDHQRMVHKRAIRDARTPEKMKMKRNRSLLLDNKLPIDEKKRRIVRSLRKLEAAGVVSTANDHQELINEIARDIQNHRRYRQQRKTELSKLKQTLRGISSKTDFFEEQIDYYNQYIKTCLDNLTAKAMGPGKKPAEAKGRKSKALSLNYTAARLQEKGVLLAIEDLPTSQFRNVIFDIVQSEQVGTFEVRARFMGVDMEKFQLKYQDLLQLQYEGVAVMKMFDKAKVNVNLLIFLLNKKFFKK
SIO_010081: iqgap3
subclass of: SO_0000673
so part of: iqgap3
location: join(845757..845799,859023..859122,862266..862422,864216..864293,865723..865799,867885..867952,869639..869752,870675..870862,873608..873695,874884..875047,876753..876840,879181..879344,882965..883125,884553..884677,889209..889372,890617..890707,893324..893491,895469..895611,898619..898789,899832..899915,901632..901703,903876..903945,905823..906031,906484..906636,907400..907563,909288..909512,914642..914782,915524..915608,916736..916968,920121..920253,922123..922225,923307..923451,923810..923897,928633..928851,929401..929567,931267..931392,933205..933313,934729..934842)
location: region:845757-934842:1
so has part: feature:845757-845799:1:exon
so has part: feature:859023-859122:1:exon
so has part: feature:862266-862422:1:exon
so has part: feature:864216-864293:1:exon
so has part: feature:865723-865799:1:exon
so has part: feature:867885-867952:1:exon
so has part: feature:869639-869752:1:exon
so has part: feature:870675-870862:1:exon
so has part: feature:873608-873695:1:exon
so has part: feature:874884-875047:1:exon
so has part: feature:876753-876840:1:exon
so has part: feature:879181-879344:1:exon
so has part: feature:882965-883125:1:exon
so has part: feature:884553-884677:1:exon
so has part: feature:889209-889372:1:exon
so has part: feature:890617-890707:1:exon
so has part: feature:893324-893491:1:exon
so has part: feature:895469-895611:1:exon
so has part: feature:898619-898789:1:exon
so has part: feature:899832-899915:1:exon
so has part: feature:901632-901703:1:exon
so has part: feature:903876-903945:1:exon
so has part: feature:905823-906031:1:exon
so has part: feature:906484-906636:1:exon
so has part: feature:907400-907563:1:exon
so has part: feature:909288-909512:1:exon
so has part: feature:914642-914782:1:exon
so has part: feature:915524-915608:1:exon
so has part: feature:916736-916968:1:exon
so has part: feature:920121-920253:1:exon
so has part: feature:922123-922225:1:exon
so has part: feature:923307-923451:1:exon
so has part: feature:923810-923897:1:exon
so has part: feature:928633-928851:1:exon
so has part: feature:929401-929567:1:exon
so has part: feature:931267-931392:1:exon
so has part: feature:933205-933313:1:exon
so has part: feature:934729-934842:1:exon

XP_032871734.1
type: Protein
SIO_000068: ncbiprotein

position:845757:1
position: 845757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934842:1
position: 934842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845757-845799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:859023-859122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862266-862422:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:864216-864293:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:865723-865799:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:867885-867952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:869639-869752:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:870675-870862:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873608-873695:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:874884-875047:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:876753-876840:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:879181-879344:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:882965-883125:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:884553-884677:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:889209-889372:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:890617-890707:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:893324-893491:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:895469-895611:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:898619-898789:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:899832-899915:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:901632-901703:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:903876-903945:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:905823-906031:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:906484-906636:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907400-907563:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:909288-909512:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:914642-914782:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:915524-915608:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:916736-916968:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:920121-920253:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:922123-922225:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:923307-923451:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:923810-923897:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:928633-928851:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:929401-929567:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:931267-931392:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:933205-933313:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:934729-934842:1:exon

LOC116968916
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968916
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 955162..964310
location: region:955162-964310:1
so has part: feature:955162-964310:1:exon
subclass of: SO_0000011

116968916
type: Gene
SIO_000068: ncbigene

position:955162:1
position: 955162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964310:1
position: 964310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:955162-964310:1:exon

LOC116968916
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968916
product: uncharacterized LOC116968916
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004410554.1
SIO_010081: LOC116968916
subclass of: SO_0000673
so part of: LOC116968916
location: join(955162..955299,959736..959745,964287..964310)
location: region:955162-964310:1
so has part: feature:955162-955299:1:exon
so has part: feature:959736-959745:1:exon
so has part: feature:964287-964310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:955162-955299:1:exon

position:955299:1
position: 955299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:959736-959745:1:exon

position:959736:1
position: 959736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959745:1
position: 959745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:964287-964310:1:exon

position:964287:1
position: 964287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968938
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1026783..1062985
location: region:1026783-1062985:1
so has part: feature:1026783-1062985:1:exon
subclass of: SO_0000010

116968938
type: Gene
SIO_000068: ncbigene

position:1026783:1
position: 1026783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062985:1
position: 1062985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026783-1062985:1:exon

LOC116968938
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968938
product: protein S100-A6-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015932.1
SIO_010081: LOC116968938
subclass of: SO_0000673
so part of: LOC116968938
location: join(1026783..1027031,1059354..1059505,1062736..1062985)
location: region:1026783-1062985:1
so has part: feature:1026783-1027031:1:exon
so has part: feature:1059354-1059505:1:exon
so has part: feature:1062736-1062985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1026783-1027031:1:exon

position:1027031:1
position: 1027031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1059354-1059505:1:exon

position:1059354:1
position: 1059354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059505:1
position: 1059505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1062736-1062985:1:exon

position:1062736:1
position: 1062736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968938
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968938
product: protein S100-A6-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_033015934.1
SIO_010081: LOC116968938
subclass of: SO_0000673
so part of: LOC116968938
location: join(1026839..1027031,1029472..1029623,1031006..1031369)
location: region:1026839-1031369:1
so has part: feature:1026839-1027031:1:exon
so has part: feature:1029472-1029623:1:exon
so has part: feature:1031006-1031369:1:exon

position:1026839:1
position: 1026839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031369:1
position: 1031369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026839-1027031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029472-1029623:1:exon

position:1029472:1
position: 1029472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029623:1
position: 1029623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1031006-1031369:1:exon

position:1031006:1
position: 1031006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968938
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein S100-A6-like isoform X1
translation: MTSRTVMGTPLEEALTNIKDIFKKYAKPTGKKDTLDLAELKKLLREEITMLDKEKLEQFADKVIEHDKSKDIDFPEFMRILAALATCNKSSGDCQQSSGCAKST
SIO_010081: LOC116968938
subclass of: SO_0000673
so part of: LOC116968938
location: join(1027028..1027031,1059354..1059505,1062736..1062894)
location: region:1027028-1062894:1
so has part: feature:1027028-1027031:1:exon
so has part: feature:1059354-1059505:1:exon
so has part: feature:1062736-1062894:1:exon

XP_032871823.1
type: Protein
SIO_000068: ncbiprotein

position:1027028:1
position: 1027028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062894:1
position: 1062894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1027028-1027031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059354-1059505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062736-1062894:1:exon

LOC116968938
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein S100-A6-like isoform X3
translation: MTSCTVMGTPLEKAAKEIMGIFNNYAKKGGKKDALDKAELKELFSKEMKMFSATTFDQLATAMLQNDTSGDVDFQEFLKMLFALINCKEKECQQSK
SIO_010081: LOC116968938
subclass of: SO_0000673
so part of: LOC116968938
location: join(1027028..1027031,1029472..1029623,1031006..1031140)
location: region:1027028-1031140:1
so has part: feature:1027028-1027031:1:exon
so has part: feature:1029472-1029623:1:exon
so has part: feature:1031006-1031140:1:exon

XP_032871825.1
type: Protein
SIO_000068: ncbiprotein

position:1031140:1
position: 1031140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1027028-1027031:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029472-1029623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031006-1031140:1:exon

LOC116968939
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1027822..1028544
location: region:1027822-1028544:1
so has part: feature:1027822-1028544:1:exon
subclass of: SO_0000011

116968939
type: Gene
SIO_000068: ncbigene

position:1027822:1
position: 1027822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028544:1
position: 1028544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1027822-1028544:1:exon

LOC116968939
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968939
product: uncharacterized LOC116968939
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004410558.1
SIO_010081: LOC116968939
subclass of: SO_0000673
so part of: LOC116968939
location: join(1027822..1028049,1028326..1028329,1028506..1028544)
location: region:1027822-1028544:1
so has part: feature:1027822-1028049:1:exon
so has part: feature:1028326-1028329:1:exon
so has part: feature:1028506-1028544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1027822-1028049:1:exon

position:1028049:1
position: 1028049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1028326-1028329:1:exon

position:1028326:1
position: 1028326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028329:1
position: 1028329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1028506-1028544:1:exon

position:1028506:1
position: 1028506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968938
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968938
product: protein S100-A6-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033015933.1
SIO_010081: LOC116968938
subclass of: SO_0000673
so part of: LOC116968938
location: join(1057610..1057922,1059354..1059505,1062736..1062985)
location: region:1057610-1062985:1
so has part: feature:1057610-1057922:1:exon
so has part: feature:1059354-1059505:1:exon
so has part: feature:1062736-1062985:1:exon

position:1057610:1
position: 1057610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057610-1057922:1:exon

position:1057922:1
position: 1057922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1059354-1059505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062736-1062985:1:exon

LOC116968938
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein S100-A6-like isoform X2
translation: MGTPLEEALTNIKDIFKKYAKPTGKKDTLDLAELKKLLREEITMLDKEKLEQFADKVIEHDKSKDIDFPEFMRILAALATCNKSSGDCQQSSGCAKST
SIO_010081: LOC116968938
subclass of: SO_0000673
so part of: LOC116968938
location: join(1059368..1059505,1062736..1062894)
location: region:1059368-1062894:1
so has part: feature:1059368-1059505:1:exon
so has part: feature:1062736-1062894:1:exon

XP_032871824.1
type: Protein
SIO_000068: ncbiprotein

position:1059368:1
position: 1059368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059368-1059505:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1062736-1062894:1:exon

LOC116968883
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1077971..1081914
location: region:1077971-1081914:1
so has part: feature:1077971-1081914:1:exon
subclass of: SO_0000010

116968883
type: Gene
SIO_000068: ncbigene

position:1077971:1
position: 1077971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081914:1
position: 1081914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077971-1081914:1:exon

LOC116968883
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968883
product: perforin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015863.1
SIO_010081: LOC116968883
subclass of: SO_0000673
so part of: LOC116968883
location: join(1077971..1078423,1078528..1078824,1080752..1081357,1081399..1081914)
location: region:1077971-1081914:1
so has part: feature:1077971-1078423:1:exon
so has part: feature:1078528-1078824:1:exon
so has part: feature:1080752-1081357:1:exon
so has part: feature:1081399-1081914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1077971-1078423:1:exon

position:1078423:1
position: 1078423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1078528-1078824:1:exon

position:1078528:1
position: 1078528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078824:1
position: 1078824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1080752-1081357:1:exon

position:1080752:1
position: 1080752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081357:1
position: 1081357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1081399-1081914:1:exon

position:1081399:1
position: 1081399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968883
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: perforin-1-like
translation: MAARCWCPPLLLISLLLLAPRVASSVCGTGTAKECNVATPMPGVEMVGEGFDVVHMRGTGTWVVDTRSWQLPDGGCTLCHNDQLEGKRQRLPQAVKHWHSATDCRRYLSGQTFNSSGGGKRTELPGGKASSAATVSAACPSAAAVQGAVGATSHHSIRTWSSSCAPCPLPCTSEADFLYSSFLRTFGTPYVVAVDLGGAYTDLTALRTCQIALNGQTLDEVKDCLKSEVLKKMTGKVDSDTKVDSDTKGPNCNQDRSKMEGKLTFHQTYSERLTEVTGGSPGSMDNLFNPSSSSDSFYLSSNSSLSTSSDSSPSSSSSISNPPSKDSLPSSNFVFTSDDSSDPDSPSNSKHSSISSSSNSLPSSDTDSSSPGGSSAYTSWLASLPAHPGVLRRTLEPLHLLLPSKDPRRDLLKAAIARHLLQTEPCPAGGRTDPSRPCSCRCQGQPGLSAACCPLRRRWGTLQVEVQRARGLWGDWLSQTDAYVRLRVGAGGRRGRHRHRVHRRHFGHNPVWNVTLHLGQVSLAASDTELTVEVWDSNSFWADALLGSCQVHLSSGHRDHVCSLKHGSLNYSHTLTCGPHLGGDLCQEYMPGR
SIO_010081: LOC116968883
subclass of: SO_0000673
so part of: LOC116968883
location: join(1078061..1078423,1078528..1078824,1080752..1081357,1081399..1081914)
location: region:1078061-1081914:1
so has part: feature:1078061-1078423:1:exon
so has part: feature:1078528-1078824:1:exon
so has part: feature:1080752-1081357:1:exon
so has part: feature:1081399-1081914:1:exon

XP_032871754.1
type: Protein
SIO_000068: ncbiprotein

position:1078061:1
position: 1078061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1078061-1078423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078528-1078824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080752-1081357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1081399-1081914:1:exon

LOC116968884
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1084501..1089540
location: region:1084501-1089540:1
so has part: feature:1084501-1089540:1:exon
subclass of: SO_0000010

116968884
type: Gene
SIO_000068: ncbigene

position:1084501:1
position: 1084501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089540:1
position: 1089540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1084501-1089540:1:exon

LOC116968884
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968884
product: perforin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015864.1
SIO_010081: LOC116968884
subclass of: SO_0000673
so part of: LOC116968884
location: join(1084501..1085202,1087133..1088286,1089136..1089540)
location: region:1084501-1089540:1
so has part: feature:1084501-1085202:1:exon
so has part: feature:1087133-1088286:1:exon
so has part: feature:1089136-1089540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1084501-1085202:1:exon

position:1085202:1
position: 1085202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1087133-1088286:1:exon

position:1087133:1
position: 1087133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088286:1
position: 1088286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1089136-1089540:1:exon

position:1089136:1
position: 1089136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968884
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: perforin-1-like
translation: MASSVCGTGTAKECNVATPMPGVEMVGEGFDVVHMRGTGTWVVDTRSWQLPDGGCTLCHNDQLEGKRQRLPQAVKHWHSATDCRRYLSGQTFNSAGEVSASESSGLDSSWSSHLDVANKDMSAVVSAAGSLSQQTEFARQKASSDRYSFSRLSFSCRLYKARLGHQPPLHPHLEQLLRTLPSTGGTSEADFLYSSFLRTFGTHYVVAVDLGGAYTDLTALRTCQIALNGQTLDEVKDCLKSEVLKKMTGKVDSDTKVDSDTKGPNCNQDRSKMEGKLTFHQTYSERLTEVTGGSPGSMDNLFNPSSSSDSFYLSSNSSLSTSSDSSPSSISNPPSKDSLSSSNFVFTSDDSSDPDSPSNSKHSSISSSSNSLPSSDTDSSSPGGSSAYTSWLASLPAHPGVLRRTLEPLHLLLPSKDPRRDLLKAAIARHLLQAGGEAMKNQCPGVGTEPCPAGGRTDPSRPCSCRCQGQPGLSAACCPLRRRWGTLQVEVQRARGLWGDWLSQTDAYVRLRVGPAGGGADIATGSTDVISDNNPVWNVTLHLGQVSLAASDTELTVEVWDSNSFWADALLGSCQVHLSSGHRDHVCSLKHGSLNYSHTLTCGPHLGGDLCQEYMPGRWPTLSNWEFLDIATGSTDVISDNNPVWNVTLDLGQVSLAASNTELTVEVWDSNSFWADALLGSCQVHLSSGHRDHVCDLKHGSLTYSLTLTCGPHLGGDLCQEYMPGR
SIO_010081: LOC116968884
subclass of: SO_0000673
so part of: LOC116968884
location: join(1084501..1085202,1087133..1088286,1089136..1089460)
location: region:1084501-1089460:1
so has part: feature:1084501-1085202:1:exon
so has part: feature:1087133-1088286:1:exon
so has part: feature:1089136-1089460:1:exon

XP_032871755.1
type: Protein
SIO_000068: ncbiprotein

position:1089460:1
position: 1089460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1084501-1085202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1087133-1088286:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1089136-1089460:1:exon

LOC116968885
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1092008..1095909
location: region:1092008-1095909:1
so has part: feature:1092008-1095909:1:exon
subclass of: SO_0000010

116968885
type: Gene
SIO_000068: ncbigene

position:1092008:1
position: 1092008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095909:1
position: 1095909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092008-1095909:1:exon

LOC116968885
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968885
product: perforin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033015865.1
SIO_010081: LOC116968885
subclass of: SO_0000673
so part of: LOC116968885
location: join(1092008..1092709,1094640..1095909)
location: region:1092008-1095909:1
so has part: feature:1092008-1092709:1:exon
so has part: feature:1094640-1095909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1092008-1092709:1:exon

position:1092709:1
position: 1092709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1094640-1095909:1:exon

position:1094640:1
position: 1094640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: perforin-1-like
translation: MASSVCGTGTAKECNVATPMPGVEMVGEGFDVVHMRGTGTWVVDTRSWQLPDGGCTLCHNDQLEGKRQRLPQAVKHWHSATDCRRYLSGQTFNSAGEVSASESSGLDSSWSSHLDVANKDMSAVVSAAGSLSQQTEFARQKASSDRYSFSRLSFSCRLYKARLGHQPPLHPHLEQLLRTLPSTGGTSEADFLYSSFLRTFGTHYVVAVDLGGAYTDLTALRTCQIALNGQTLDEVKDCLKSEVLKKMTGKVDSDTKVDSDTKGPNCNQDRSKMEGKLTFHQTYSERLTEVTGGSPGSMDNLFNPSSSSDSFYLSSNSSLSTSSDSSPSSISNPPSKDSLPSSNFVFTSDDSSDPDSPSNSKHSSISSSSSNSLPSSDTDSSSPGGSSAYTSWLASLPAHPGVLRRTLEPLHLLLPSKDPRRDLLKAAIARHLLQAGGEAMKNQCPGVGTEPCPAGGRTDPSRPCSCRCQGQPGLSAACCPLRRRWGTLQVEVQRARGLWGDWLSQTDAYVRLRVGPAGGGADIAAASTDVISDNNPVWNVTLDLGQVSLAASDTELTVEVWDSNSFWADALLGSCQVHLSSGHRDHVCDLKHGSLTYSHTLTCGPHLGGDLCQEYMPGR
SIO_010081: LOC116968885
subclass of: SO_0000673
so part of: LOC116968885
location: join(1092008..1092709,1094640..1095797)
location: region:1092008-1095797:1
so has part: feature:1092008-1092709:1:exon
so has part: feature:1094640-1095797:1:exon

XP_032871756.1
type: Protein
SIO_000068: ncbiprotein

position:1095797:1
position: 1095797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092008-1092709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1094640-1095797:1:exon

prf1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: prf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1100628..1114567)
location: region:1100628-1114567:-1
so has part: feature:1100628-1114567:-1:exon
subclass of: SO_0000010

116968882
type: Gene
SIO_000068: ncbigene

position:1100628:-1
position: 1100628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114567:-1
position: 1114567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1100628-1114567:-1:exon

prf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: prf1
product: perforin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033015862.1
SIO_010081: prf1
subclass of: SO_0000673
so part of: prf1
location: complement(join(1100628..1101694,1108509..1108902,1113700..1114567))
location: region:1100628-1114567:-1
so has part: feature:1113700-1114567:-1:exon
so has part: feature:1108509-1108902:-1:exon
so has part: feature:1100628-1101694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1113700-1114567:-1:exon

position:1113700:-1
position: 1113700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1108509-1108902:-1:exon

position:1108509:-1
position: 1108509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108902:-1
position: 1108902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1100628-1101694:-1:exon

position:1101694:-1
position: 1101694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

prf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: prf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: perforin-1 isoform X2
translation: MAARCWCPPLVLISLLLLVPRPVSSVCGTVTAKECKAATPMPGVEKVGEGFDVVHMRGTGTWVVDTQTWQLPNGGCTLCHNDQLGGKRQRLPQAVQHWHSATDCRRHLSGQTFDSTEEVSKSESSELDSSWSAHLDVEHKDMSAAVSAAGSHSQQTEFARQKASSDRYSFSRLSFSCRLYQARLGHQPPLHPHLRKRLRTLPRTGGTSKADFLYSDLLRTFGTHYVVAVDLGGAYTDLTALRTCQIALNGQTLDEVKDCLEAEVQLKMTGKVDSGAKGQRCRQDRSKMEGKLTFHQTYSERLTEVTGGSLGSMDNIFNPPSSSDSFYFSSNSSLSTSSPSSDSFSSSPSPDESISPSPSIFSSFLSFFLPSSSSSSISNPPSKDSLPSSNVYFTSDDSSDPHSPSNSKHFSILSSSSNSLPFSDVFFASSSPGGSSAYTSWLSSLSAHPGVLRRTLEPLHLLLPFNDSRRGLLKAAISRHLLQAGGEAMKNQCPGVGTEPCPAGGRTDPSRPCSCRCQGQPGVNADCCPLRWRSGALQVEVQRARGLPGDWFSQADPYVRLRVGPAGPSAATDIVWNNNNPVWNEILHLGQVSLAPGPAGDAELTLEVWDRDVSLDDLRGTCQVRLSAGHSDHTCSLDRGSLTYSVTLTCGPHLGGDLCQEYMPGR
SIO_010081: prf1
subclass of: SO_0000673
so part of: prf1
location: complement(join(1100853..1101694,1108509..1108902,1113700..1114464))
location: region:1100853-1114464:-1
so has part: feature:1113700-1114464:-1:exon
so has part: feature:1108509-1108902:-1:exon
so has part: feature:1100853-1101694:-1:exon

XP_032871753.1
type: Protein
SIO_000068: ncbiprotein

position:1100853:-1
position: 1100853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114464:-1
position: 1114464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113700-1114464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1108509-1108902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1100853-1101694:-1:exon

prf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: prf1
product: perforin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033015861.1
SIO_010081: prf1
subclass of: SO_0000673
so part of: prf1
location: complement(join(1107333..1108902,1113700..1114567))
location: region:1107333-1114567:-1
so has part: feature:1113700-1114567:-1:exon
so has part: feature:1107333-1108902:-1:exon

position:1107333:-1
position: 1107333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113700-1114567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1107333-1108902:-1:exon

prf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: prf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: perforin-1 isoform X1
translation: MAARCWCPPLVLISLLLLVPRPVSSVCGTVTAKECKAATPMPGVEKVGEGFDVVHMRGTGTWVVDTQTWQLPNGGCTLCHNDQLGGKRQRLPQAVQHWHSATDCRRHLSGQTFDSTEEVSKSESSELDSSWSAHLDVEHKDMSAAVSAAGSHSQQTEFARQKASSDRYSFSRLSFSCRLYQARLGHQPPLHPHLRKRLRTLPRTGGTSKADFLYSDLLRTFGTHYVVAVDLGGAYTDLTALRTCQIALNGQTLDEVKDCLEAEVQLKMTGKVDSGAKGQRCRQDRSKMEGKLTFHQTYSERLTEVTGGSLGSMDNIFNPPSSSDSFYFSSNSSLSTSSPSSDSFSSSPSPDESISPSPSIFSSFLSFFLPSSSSSSISNPPSKDSLPSSNDSSDSDSPSNSKHSSIFSSSSNSLPSSSNNSLPFSDSFFASSSPGGSSAYTSWLASLPAHPGVLHRTLEPLHLLLPSSDPRRGLLKAAISRHILQAGKKAMMNQCPGVGTEPCPGGGRTDPSRPCSCRCQGQPEVSADCCSRRRRLGALRAEVHRARGLWGDWLSQTDAFVRLRVGPAGGGAATATGSTAVMWNNNNPVWDVTLELGQVNLVHGPHGDTVLTVEVWDRDHGWDDDLLGSCQVRLSSGHRDHVCDLNHGSLTYSLTLTCGPHLGGDLCQEYMPGR
SIO_010081: prf1
subclass of: SO_0000673
so part of: prf1
location: complement(join(1107643..1108902,1113700..1114464))
location: region:1107643-1114464:-1
so has part: feature:1113700-1114464:-1:exon
so has part: feature:1107643-1108902:-1:exon

XP_032871752.1
type: Protein
SIO_000068: ncbiprotein

position:1107643:-1
position: 1107643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113700-1114464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1107643-1108902:-1:exon

LOC116968886
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<1729296..1734555)
location: region:1729296-1734555:-1
so has part: feature:1729296-1734555:-1:exon
subclass of: SO_0000010

116968886
type: Gene
SIO_000068: ncbigene

position:1729296:-1
position: 1729296
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:1734555:-1
position: 1734555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1729296-1734555:-1:exon

LOC116968886
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968886
product: aquaporin-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033015866.1
SIO_010081: LOC116968886
subclass of: SO_0000673
so part of: LOC116968886
location: complement(join(<1729296..1729354,1730456..1730593,1731812..1731938,1734380..1734555))
location: region:1729296-1734555:-1
so has part: feature:1734380-1734555:-1:exon
so has part: feature:1731812-1731938:-1:exon
so has part: feature:1730456-1730593:-1:exon
so has part: feature:1729296-1729354:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1734380-1734555:-1:exon

position:1734380:-1
position: 1734380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1731812-1731938:-1:exon

position:1731812:-1
position: 1731812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1731938:-1
position: 1731938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1730456-1730593:-1:exon

position:1730456:-1
position: 1730456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1730593:-1
position: 1730593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1729296-1729354:-1:exon

position:1729354:-1
position: 1729354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968886
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aquaporin-3-like
translation: MERVRAIFSPVRESLKLKNRLFRECLAEFLGVCILILFGCGAVAQMVTSHTTRGEFLSVNLGFGIGATFGVCIAGEISGAHLNPAVSFSLCLLGRFQWKKLPFYMFFQTLGGFVGAAIVYGVHHDGIHAVNNGTLSVTGPNATA
SIO_010081: LOC116968886
subclass of: SO_0000673
so part of: LOC116968886
location: complement(join(<1729296..1729354,1730456..1730593,1731812..1731938,1734380..1734487))
location: region:1729296-1734487:-1
so has part: feature:1734380-1734487:-1:exon
so has part: feature:1731812-1731938:-1:exon
so has part: feature:1730456-1730593:-1:exon
so has part: feature:1729296-1729354:-1:exon

XP_032871757.1
type: Protein
SIO_000068: ncbiprotein

position:1734487:-1
position: 1734487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1734380-1734487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1731812-1731938:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1730456-1730593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1729296-1729354:-1:exon

LOC116968877
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968877
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2042188..2137813
location: region:2042188-2137813:1
so has part: feature:2042188-2137813:1:exon
subclass of: SO_0000010

116968877
type: Gene
SIO_000068: ncbigene

position:2042188:1
position: 2042188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2137813:1
position: 2137813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2042188-2137813:1:exon

LOC116968877
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968877
product: zinc finger and BTB domain-containing protein 7B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033015853.1
SIO_010081: LOC116968877
subclass of: SO_0000673
so part of: LOC116968877
location: join(2042188..2042408,2083145..2083297,2125473..2125602,2132052..2132701,2133749..2134272,2137125..2137813)
location: region:2042188-2137813:1
so has part: feature:2042188-2042408:1:exon
so has part: feature:2083145-2083297:1:exon
so has part: feature:2125473-2125602:1:exon
so has part: feature:2132052-2132701:1:exon
so has part: feature:2133749-2134272:1:exon
so has part: feature:2137125-2137813:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2042188-2042408:1:exon

position:2042408:1
position: 2042408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2083145-2083297:1:exon

position:2083145:1
position: 2083145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2083297:1
position: 2083297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2125473-2125602:1:exon

position:2125473:1
position: 2125473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2125602:1
position: 2125602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2132052-2132701:1:exon

position:2132052:1
position: 2132052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2132701:1
position: 2132701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2133749-2134272:1:exon

position:2133749:1
position: 2133749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2134272:1
position: 2134272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2137125-2137813:1:exon

position:2137125:1
position: 2137125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trnai-aau
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trnai-aau
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2060468..2060541)
location: region:2060468-2060541:-1
so has part: feature:2060468-2060541:-1:exon
subclass of: SO_0000663

116968943
type: Gene
SIO_000068: ncbigene

position:2060468:-1
position: 2060468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2060541:-1
position: 2060541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2060468-2060541:-1:exon

trnai-aau
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 386614
gene: trnai-aau
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2060505..2060507),aa:Ile, seq:aat)
SIO_010081: trnai-aau
subclass of: SO_0000673
so part of: trnai-aau
location: complement(2060468..2060541)
location: region:2060468-2060541:-1
so has part: feature:2060468-2060541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2060468-2060541:-1:exon

LOC116968877
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968877
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 7B-like
translation: MGASEDELIGIPFPEHSSDLLSSLNDQRHRGLLCDVTIVTQGLEYRTHRAVLAACSHYFRKLFTSKPFSGQRNVCELDFIQPPVLAALLEFAYTATLTISSANMREVLRAARVLEIQCVADACLDILRCSGEGEQEEQLLQQEQLLQQEQQLLQQQQQQQQLVEESASADPLLHHHPHHHHHHPKDGTFPGDGLAQEMPKIRRRKRAASKKAPRITLSNRGCLYRIVQPLRTSNNHKLQLKQQQQQQRRPAQDQGYSMEVEGRVAARPEEEEEAEEPLDYRPLPPSPADREGDGEGEGDGPEIDSLSASFPFPFLSSLGAAAAAASGPASPDNKPGGRGAGGGRRKSQMPQECPICHKVIHGAGKLPRHMRTHTGEKPFACEVCAVRFTRNDKLKIHMRKHTGERPYCCNCCDARFLHSYDLKNHARLHTGDRPFECSQCRKAFVRLDHLHRHLKGQNCLEVRTRRRKDDEGGDDGDDGGDDGGNGDDGGVNGDSADGKGADGGESGAEYGTPVREDGSLRTAWSHLAGAWDQEPPEEMAAEDSS
SIO_010081: LOC116968877
subclass of: SO_0000673
so part of: LOC116968877
location: join(2132057..2132701,2133749..2134272,2137125..2137593)
location: region:2132057-2137593:1
so has part: feature:2132057-2132701:1:exon
so has part: feature:2133749-2134272:1:exon
so has part: feature:2137125-2137593:1:exon

XP_032871744.1
type: Protein
SIO_000068: ncbiprotein

position:2132057:1
position: 2132057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2137593:1
position: 2137593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2132057-2132701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2133749-2134272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2137125-2137593:1:exon

rfx5
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rfx5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3418979..3440078)
location: region:3418979-3440078:-1
so has part: feature:3418979-3440078:-1:exon
subclass of: SO_0000010

116968872
type: Gene
SIO_000068: ncbigene

position:3418979:-1
position: 3418979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3440078:-1
position: 3440078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3418979-3440078:-1:exon

rfx5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rfx5
product: regulatory factor X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033015845.1
SIO_010081: rfx5
subclass of: SO_0000673
so part of: rfx5
location: complement(join(3418979..3420006,3420837..3420928,3422266..3422467,3424760..3424841,3425675..3425791,3426569..3426706,3429859..3429941,3432923..3432956,3436817..3436946,3440013..3440078))
location: region:3418979-3440078:-1
so has part: feature:3440013-3440078:-1:exon
so has part: feature:3436817-3436946:-1:exon
so has part: feature:3432923-3432956:-1:exon
so has part: feature:3429859-3429941:-1:exon
so has part: feature:3426569-3426706:-1:exon
so has part: feature:3425675-3425791:-1:exon
so has part: feature:3424760-3424841:-1:exon
so has part: feature:3422266-3422467:-1:exon
so has part: feature:3420837-3420928:-1:exon
so has part: feature:3418979-3420006:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3440013-3440078:-1:exon

position:3440013:-1
position: 3440013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3436817-3436946:-1:exon

position:3436817:-1
position: 3436817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3436946:-1
position: 3436946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3432923-3432956:-1:exon

position:3432923:-1
position: 3432923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3432956:-1
position: 3432956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3429859-3429941:-1:exon

position:3429859:-1
position: 3429859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3429941:-1
position: 3429941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3426569-3426706:-1:exon

position:3426569:-1
position: 3426569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3426706:-1
position: 3426706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3425675-3425791:-1:exon

position:3425675:-1
position: 3425675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3425791:-1
position: 3425791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3424760-3424841:-1:exon

position:3424760:-1
position: 3424760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3424841:-1
position: 3424841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3422266-3422467:-1:exon

position:3422266:-1
position: 3422266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3422467:-1
position: 3422467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3420837-3420928:-1:exon

position:3420837:-1
position: 3420837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3420928:-1
position: 3420928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3418979-3420006:-1:exon

position:3420006:-1
position: 3420006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rfx5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rfx5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding protein RFX5
translation: MEVIEVHLQEADRGRLSPSDSETVDTEPSTLLHKLKSGINKNVQIKVENVLQEVKGFSDSEKLYFYLQLPSGPSHGEKSSTNVSASDQYPTSTADQMHACNWIRNHLEEHPDTCLPKQHVYESYKRYCDNLSYRLLSAANFGKIMRDVFPNFKARRLGGRGQSKYCYGGIRRKTVVSMPSLPSLDLKLPDPSELKEVDKSQQNETLMTAAISLICEWAQRVLMRQFDTVIDLARFLVMEHLISPRTKNATMVMEELMTENMLKGEKDPKHRQQSKNAGKNVEERTQDSQTETSKGTVPRSPSGKDVSPSAVRVKQPTVVDVDSVINRFAPIRPKALAKKLVAISAAGVIARSALPLRLGAIPLSPGPGGGAGMVPLLKKVTVILPSVSASPVRLPALPAEVPPPAVIVAAAATGPKGVKFPPGPPQALPRKRHACRPLLPPLGAEHLSKKRRGRPRKASPHTGKSGPAPSRQQTPGAILLPDIAPAPRLPPAGTVAAAVPPTPQAGARVLPPPPPPPPPPVPPSLGQPRTNTGAAGSVVRKSSVIRSLPGLAGRDSKYRVASAQDPRQPQTTTPRPTSSGLP
SIO_010081: rfx5
subclass of: SO_0000673
so part of: rfx5
location: complement(join(3419125..3420006,3420837..3420928,3422266..3422467,3424760..3424841,3425675..3425791,3426569..3426706,3429859..3429941,3432923..3432956,3436817..3436935))
location: region:3419125-3436935:-1
so has part: feature:3436817-3436935:-1:exon
so has part: feature:3432923-3432956:-1:exon
so has part: feature:3429859-3429941:-1:exon
so has part: feature:3426569-3426706:-1:exon
so has part: feature:3425675-3425791:-1:exon
so has part: feature:3424760-3424841:-1:exon
so has part: feature:3422266-3422467:-1:exon
so has part: feature:3420837-3420928:-1:exon
so has part: feature:3419125-3420006:-1:exon

XP_032871736.1
type: Protein
SIO_000068: ncbiprotein

position:3419125:-1
position: 3419125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3436935:-1
position: 3436935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3436817-3436935:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3432923-3432956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3429859-3429941:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3426569-3426706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3425675-3425791:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3424760-3424841:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3422266-3422467:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3420837-3420928:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3419125-3420006:-1:exon

LOC116968874
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3448306..3473841
location: region:3448306-3473841:1
so has part: feature:3448306-3473841:1:exon
subclass of: SO_0000011

116968874
type: Gene
SIO_000068: ncbigene

position:3448306:1
position: 3448306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3473841:1
position: 3473841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3448306-3473841:1:exon

LOC116968874
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968874
product: uncharacterized LOC116968874
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004410548.1
SIO_010081: LOC116968874
subclass of: SO_0000673
so part of: LOC116968874
location: join(3448306..3448471,3448980..3448981,3473803..3473841)
location: region:3448306-3473841:1
so has part: feature:3448306-3448471:1:exon
so has part: feature:3448980-3448981:1:exon
so has part: feature:3473803-3473841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3448306-3448471:1:exon

position:3448471:1
position: 3448471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3448980-3448981:1:exon

position:3448980:1
position: 3448980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3448981:1
position: 3448981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3473803-3473841:1:exon

position:3473803:1
position: 3473803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

selenbp1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: selenbp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3448362..3477339)
location: region:3448362-3477339:-1
so has part: feature:3448362-3477339:-1:exon
subclass of: SO_0000010

116968873
type: Gene
SIO_000068: ncbigene

position:3448362:-1
position: 3448362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3477339:-1
position: 3477339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3448362-3477339:-1:exon

selenbp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: selenbp1
product: selenium binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015848.1
SIO_010081: selenbp1
subclass of: SO_0000673
so part of: selenbp1
location: complement(join(3448362..3448699,3448914..3449120,3451614..3451732,3454683..3454775,3456794..3456915,3458793..3458871,3460230..3460411,3461803..3461985,3464163..3464283,3470790..3470975,3472282..3472394,3474430..3474486,3477133..3477339))
location: region:3448362-3477339:-1
so has part: feature:3477133-3477339:-1:exon
so has part: feature:3474430-3474486:-1:exon
so has part: feature:3472282-3472394:-1:exon
so has part: feature:3470790-3470975:-1:exon
so has part: feature:3464163-3464283:-1:exon
so has part: feature:3461803-3461985:-1:exon
so has part: feature:3460230-3460411:-1:exon
so has part: feature:3458793-3458871:-1:exon
so has part: feature:3456794-3456915:-1:exon
so has part: feature:3454683-3454775:-1:exon
so has part: feature:3451614-3451732:-1:exon
so has part: feature:3448914-3449120:-1:exon
so has part: feature:3448362-3448699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3477133-3477339:-1:exon

position:3477133:-1
position: 3477133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3474430-3474486:-1:exon

position:3474430:-1
position: 3474430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3474486:-1
position: 3474486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3472282-3472394:-1:exon

position:3472282:-1
position: 3472282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3472394:-1
position: 3472394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3470790-3470975:-1:exon

position:3470790:-1
position: 3470790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3470975:-1
position: 3470975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3464163-3464283:-1:exon

position:3464163:-1
position: 3464163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3464283:-1
position: 3464283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3461803-3461985:-1:exon

position:3461803:-1
position: 3461803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3461985:-1
position: 3461985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3460230-3460411:-1:exon

position:3460230:-1
position: 3460230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3460411:-1
position: 3460411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3458793-3458871:-1:exon

position:3458793:-1
position: 3458793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3458871:-1
position: 3458871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3456794-3456915:-1:exon

position:3456794:-1
position: 3456794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3456915:-1
position: 3456915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3454683-3454775:-1:exon

position:3454683:-1
position: 3454683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3454775:-1
position: 3454775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3451614-3451732:-1:exon

position:3451614:-1
position: 3451614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3451732:-1
position: 3451732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3448914-3449120:-1:exon

position:3448914:-1
position: 3448914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3449120:-1
position: 3449120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3448362-3448699:-1:exon

position:3448699:-1
position: 3448699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

selenbp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: selenbp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methanethiol oxidase
translation: MASKCGSCGPGYSSPLAAMKGPREEIVYLPCIYRNTDVNKPDYLATVDVDPKSPTYSQVVHRLPMPNLNDELHHSGWNTCSSCYGNPSKSRDRLILPALISSRIYVVDVGTEPRAPRLHKTVEPTDLFWKCDLANPHTSHCLPSGEVMISSIGNPSGNGKGGFALLDGETFEVKGNWEQEGEAAEFGYDFWYQPRHNVMFSSEWGAPKALAGGFNLDDIAAGLYGHSLHVWDWTERKRIQTIDLGEDGLIPLEIRFLHDPDAAEGLVGCALSSCVFRFYKTKKGDWAAEKVISIPSKKVEGWVLPDIPGLITDILISLDDRFLYFSNWLHGDIRQYDITDIRNPKLVGQVFIGGSVLKGGPVKVLEDKELDSQPEPRIVNGTWIYGGPQMIQLSLDGKRMYVTTSLYSGWDKQFYPDMVKKGSVMLQVDVDSDKGGLTVNENFLVDFGKEPEGPALAHEIRYPGGDCSSDIWL
SIO_010081: selenbp1
subclass of: SO_0000673
so part of: selenbp1
location: complement(join(3448958..3449120,3451614..3451732,3454683..3454775,3456794..3456915,3458793..3458871,3460230..3460411,3461803..3461985,3464163..3464283,3470790..3470975,3472282..3472394,3474430..3474486,3477133..3477136))
location: region:3448958-3477136:-1
so has part: feature:3477133-3477136:-1:exon
so has part: feature:3474430-3474486:-1:exon
so has part: feature:3472282-3472394:-1:exon
so has part: feature:3470790-3470975:-1:exon
so has part: feature:3464163-3464283:-1:exon
so has part: feature:3461803-3461985:-1:exon
so has part: feature:3460230-3460411:-1:exon
so has part: feature:3458793-3458871:-1:exon
so has part: feature:3456794-3456915:-1:exon
so has part: feature:3454683-3454775:-1:exon
so has part: feature:3451614-3451732:-1:exon
so has part: feature:3448958-3449120:-1:exon

XP_032871739.1
type: Protein
SIO_000068: ncbiprotein

position:3448958:-1
position: 3448958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3477136:-1
position: 3477136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3477133-3477136:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3474430-3474486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3472282-3472394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3470790-3470975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3464163-3464283:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3461803-3461985:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3460230-3460411:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3458793-3458871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3456794-3456915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3454683-3454775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3451614-3451732:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3448958-3449120:-1:exon

psmb4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: psmb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3492276..3504707
location: region:3492276-3504707:1
so has part: feature:3492276-3504707:1:exon
subclass of: SO_0000010

116968880
type: Gene
SIO_000068: ncbigene

position:3492276:1
position: 3492276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3504707:1
position: 3504707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3492276-3504707:1:exon

psmb4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: psmb4
product: proteasome 20S subunit beta 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 36 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033015857.1
SIO_010081: psmb4
subclass of: SO_0000673
so part of: psmb4
location: join(3492276..3492392,3494468..3494674,3496481..3496564,3497081..3497143,3497763..3497844,3497939..3498055,3500121..3500209,3503954..3504707)
location: region:3492276-3504707:1
so has part: feature:3492276-3492392:1:exon
so has part: feature:3494468-3494674:1:exon
so has part: feature:3496481-3496564:1:exon
so has part: feature:3497081-3497143:1:exon
so has part: feature:3497763-3497844:1:exon
so has part: feature:3497939-3498055:1:exon
so has part: feature:3500121-3500209:1:exon
so has part: feature:3503954-3504707:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3492276-3492392:1:exon

position:3492392:1
position: 3492392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3494468-3494674:1:exon

position:3494468:1
position: 3494468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3494674:1
position: 3494674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3496481-3496564:1:exon

position:3496481:1
position: 3496481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3496564:1
position: 3496564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3497081-3497143:1:exon

position:3497081:1
position: 3497081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3497143:1
position: 3497143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3497763-3497844:1:exon

position:3497763:1
position: 3497763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3497844:1
position: 3497844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3497939-3498055:1:exon

position:3497939:1
position: 3497939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3498055:1
position: 3498055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3500121-3500209:1:exon

position:3500121:1
position: 3500121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3500209:1
position: 3500209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3503954-3504707:1:exon

position:3503954:1
position: 3503954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

psmb4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: psmb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-4
translation: MMDGPEPGSFMSVNVTANCGGNPAKRTMSPMVTGTSVLGVKFDGGVILAADMLGSYGSMARFRNVSRLMKVNEATILGASGDYADYQHLKQAIEQMIIDEDLLGDGHSYSPKAIHSWLTRVMYNRRSRMNPLWNTVIIGGINNGESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMRQVAENNAVISKDEARQLIERCLKVLYYRDARSYNRYQLATVTAAGVEIEGPLTSETNWDIAHMISGFE
SIO_010081: psmb4
subclass of: SO_0000673
so part of: psmb4
location: join(3492310..3492392,3494468..3494674,3496481..3496564,3497081..3497143,3497763..3497844,3497939..3498055,3500121..3500209,3503954..3503966)
location: region:3492310-3503966:1
so has part: feature:3492310-3492392:1:exon
so has part: feature:3494468-3494674:1:exon
so has part: feature:3496481-3496564:1:exon
so has part: feature:3497081-3497143:1:exon
so has part: feature:3497763-3497844:1:exon
so has part: feature:3497939-3498055:1:exon
so has part: feature:3500121-3500209:1:exon
so has part: feature:3503954-3503966:1:exon

XP_032871748.1
type: Protein
SIO_000068: ncbiprotein

position:3492310:1
position: 3492310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3503966:1
position: 3503966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3492310-3492392:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3494468-3494674:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3496481-3496564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3497081-3497143:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3497763-3497844:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3497939-3498055:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3500121-3500209:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3503954-3503966:1:exon

gba
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: gba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3882923..3902363)
location: region:3882923-3902363:-1
so has part: feature:3882923-3902363:-1:exon
subclass of: SO_0000010

116968926
type: Gene
SIO_000068: ncbigene

position:3882923:-1
position: 3882923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3902363:-1
position: 3902363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3882923-3902363:-1:exon

gba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gba
product: glucosylceramidase beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033015916.1
SIO_010081: gba
subclass of: SO_0000673
so part of: gba
location: complement(join(3882923..3883052,3884250..3884366,3887539..3887702,3889895..3890119,3891160..3891397,3892296..3892468,3893636..3893769,3894498..3894644,3897472..3897663,3899397..3899497,3902302..3902363))
location: region:3882923-3902363:-1
so has part: feature:3902302-3902363:-1:exon
so has part: feature:3899397-3899497:-1:exon
so has part: feature:3897472-3897663:-1:exon
so has part: feature:3894498-3894644:-1:exon
so has part: feature:3893636-3893769:-1:exon
so has part: feature:3892296-3892468:-1:exon
so has part: feature:3891160-3891397:-1:exon
so has part: feature:3889895-3890119:-1:exon
so has part: feature:3887539-3887702:-1:exon
so has part: feature:3884250-3884366:-1:exon
so has part: feature:3882923-3883052:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3902302-3902363:-1:exon

position:3902302:-1
position: 3902302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3899397-3899497:-1:exon

position:3899397:-1
position: 3899397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3899497:-1
position: 3899497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3897472-3897663:-1:exon

position:3897472:-1
position: 3897472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3897663:-1
position: 3897663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3894498-3894644:-1:exon

position:3894498:-1
position: 3894498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3894644:-1
position: 3894644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3893636-3893769:-1:exon

position:3893636:-1
position: 3893636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3893769:-1
position: 3893769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3892296-3892468:-1:exon

position:3892296:-1
position: 3892296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3892468:-1
position: 3892468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3891160-3891397:-1:exon

position:3891160:-1
position: 3891160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3891397:-1
position: 3891397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3889895-3890119:-1:exon

position:3889895:-1
position: 3889895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3890119:-1
position: 3890119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3887539-3887702:-1:exon

position:3887539:-1
position: 3887539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3887702:-1
position: 3887702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3884250-3884366:-1:exon

position:3884250:-1
position: 3884250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3884366:-1
position: 3884366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3882923-3883052:-1:exon

position:3883052:-1
position: 3883052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gba
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gba
product: glucosylceramidase beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015917.1
SIO_010081: gba
subclass of: SO_0000673
so part of: gba
location: complement(join(3882923..3883052,3884250..3884366,3887539..3887702,3889895..3890119,3891160..3891397,3892296..3892468,3893636..3893769,3894498..3894644,3897472..3897663,3899397..3899497,3902223..3902319))
location: region:3882923-3902319:-1
so has part: feature:3902223-3902319:-1:exon
so has part: feature:3899397-3899497:-1:exon
so has part: feature:3897472-3897663:-1:exon
so has part: feature:3894498-3894644:-1:exon
so has part: feature:3893636-3893769:-1:exon
so has part: feature:3892296-3892468:-1:exon
so has part: feature:3891160-3891397:-1:exon
so has part: feature:3889895-3890119:-1:exon
so has part: feature:3887539-3887702:-1:exon
so has part: feature:3884250-3884366:-1:exon
so has part: feature:3882923-3883052:-1:exon

position:3902319:-1
position: 3902319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3902223-3902319:-1:exon

position:3902223:-1
position: 3902223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3899397-3899497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3897472-3897663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3894498-3894644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3893636-3893769:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3892296-3892468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3891160-3891397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3889895-3890119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3887539-3887702:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3884250-3884366:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3882923-3883052:-1:exon

gba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal acid glucosylceramidase
translation: MSSLWWSVAFLPLWALLPVTAGLPCAAQSFGWTSAVCVCNATYCDTMEPVVVPAKGRYLLYETSRAGKRLQLTRGLVQPSAKGQDLQLTLDVRKKHQWIKGFGGAMTDAAAINILSLSPASRENLLKSYFGDEGIGYNVIRVPMASCDFSTRVYTYDDHPGDLGLKHFSLAEEDTKMKIPLIQAAIRLSRRPVSLFASPWTSPAWMKTSNSTIGKGTLRGSPGGPYYKAWANYFIRFLDEYSRHNLTFWAVTAENEPSAGMFTGYHFQCLGFTPELQRDFIARDLGPALRSGPHRSVRLLMLDDQRLLLPHWASVVLGDPQAARYVDGIAVHWYLDAMTPADKTLGTTHARFPEYFMFATEACTGSMPWDHLVQLGSWERGAMYSHDIIQDLNYFVTGWTDWNMALDLEGGPNWVKNFADSPVIVDRKKDLFYKQPMFYHMAHFSKFVPEGSRRVGLDASEETGLETVAVLQPDGTAVLTVLNWTPKNIDFWIRDPEVGFIHGHSPADSIQSYLWKRK
SIO_010081: gba
subclass of: SO_0000673
so part of: gba
location: complement(join(3882947..3883052,3884250..3884366,3887539..3887702,3889895..3890119,3891160..3891397,3892296..3892468,3893636..3893769,3894498..3894644,3897472..3897663,3899397..3899457))
location: region:3882947-3899457:-1
so has part: feature:3899397-3899457:-1:exon
so has part: feature:3897472-3897663:-1:exon
so has part: feature:3894498-3894644:-1:exon
so has part: feature:3893636-3893769:-1:exon
so has part: feature:3892296-3892468:-1:exon
so has part: feature:3891160-3891397:-1:exon
so has part: feature:3889895-3890119:-1:exon
so has part: feature:3887539-3887702:-1:exon
so has part: feature:3884250-3884366:-1:exon
so has part: feature:3882947-3883052:-1:exon

XP_032871807.1
type: Protein
SIO_000068: ncbiprotein

position:3882947:-1
position: 3882947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3899457:-1
position: 3899457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3899397-3899457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3897472-3897663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3894498-3894644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3893636-3893769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3892296-3892468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3891160-3891397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3889895-3890119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3887539-3887702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3884250-3884366:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3882947-3883052:-1:exon

gba
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gba
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal acid glucosylceramidase
translation: MSSLWWSVAFLPLWALLPVTAGLPCAAQSFGWTSAVCVCNATYCDTMEPVVVPAKGRYLLYETSRAGKRLQLTRGLVQPSAKGQDLQLTLDVRKKHQWIKGFGGAMTDAAAINILSLSPASRENLLKSYFGDEGIGYNVIRVPMASCDFSTRVYTYDDHPGDLGLKHFSLAEEDTKMKIPLIQAAIRLSRRPVSLFASPWTSPAWMKTSNSTIGKGTLRGSPGGPYYKAWANYFIRFLDEYSRHNLTFWAVTAENEPSAGMFTGYHFQCLGFTPELQRDFIARDLGPALRSGPHRSVRLLMLDDQRLLLPHWASVVLGDPQAARYVDGIAVHWYLDAMTPADKTLGTTHARFPEYFMFATEACTGSMPWDHLVQLGSWERGAMYSHDIIQDLNYFVTGWTDWNMALDLEGGPNWVKNFADSPVIVDRKKDLFYKQPMFYHMAHFSKFVPEGSRRVGLDASEETGLETVAVLQPDGTAVLTVLNWTPKNIDFWIRDPEVGFIHGHSPADSIQSYLWKRK
SIO_010081: gba
subclass of: SO_0000673
so part of: gba
location: complement(join(3882947..3883052,3884250..3884366,3887539..3887702,3889895..3890119,3891160..3891397,3892296..3892468,3893636..3893769,3894498..3894644,3897472..3897663,3899397..3899457))
location: region:3882947-3899457:-1
so has part: feature:3899397-3899457:-1:exon
so has part: feature:3897472-3897663:-1:exon
so has part: feature:3894498-3894644:-1:exon
so has part: feature:3893636-3893769:-1:exon
so has part: feature:3892296-3892468:-1:exon
so has part: feature:3891160-3891397:-1:exon
so has part: feature:3889895-3890119:-1:exon
so has part: feature:3887539-3887702:-1:exon
so has part: feature:3884250-3884366:-1:exon
so has part: feature:3882947-3883052:-1:exon

XP_032871808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3899397-3899457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3897472-3897663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3894498-3894644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3893636-3893769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3892296-3892468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3891160-3891397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3889895-3890119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3887539-3887702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3884250-3884366:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3882947-3883052:-1:exon

LOC116968927
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3903211..3913388
location: region:3903211-3913388:1
so has part: feature:3903211-3913388:1:exon
subclass of: SO_0000010

116968927
type: Gene
SIO_000068: ncbigene

position:3903211:1
position: 3903211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3913388:1
position: 3913388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3903211-3913388:1:exon

LOC116968927
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968927
product: chromatin target of PRMT1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033015918.1
SIO_010081: LOC116968927
subclass of: SO_0000673
so part of: LOC116968927
location: join(3903211..3903400,3905482..3905563,3907984..3908134,3910665..3910830,3911283..3911405,3912810..3913388)
location: region:3903211-3913388:1
so has part: feature:3903211-3903400:1:exon
so has part: feature:3905482-3905563:1:exon
so has part: feature:3907984-3908134:1:exon
so has part: feature:3910665-3910830:1:exon
so has part: feature:3911283-3911405:1:exon
so has part: feature:3912810-3913388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3903211-3903400:1:exon

position:3903400:1
position: 3903400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3905482-3905563:1:exon

position:3905482:1
position: 3905482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3905563:1
position: 3905563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3907984-3908134:1:exon

position:3907984:1
position: 3907984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3908134:1
position: 3908134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3910665-3910830:1:exon

position:3910665:1
position: 3910665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3910830:1
position: 3910830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3911283-3911405:1:exon

position:3911283:1
position: 3911283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3911405:1
position: 3911405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3912810-3913388:1:exon

position:3912810:1
position: 3912810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968927
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968927
product: chromatin target of PRMT1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033015919.1
SIO_010081: LOC116968927
subclass of: SO_0000673
so part of: LOC116968927
location: join(3903212..3903400,3905482..3905563,3907984..3908134,3910668..3910830,3911283..3911405,3912810..3913388)
location: region:3903212-3913388:1
so has part: feature:3903212-3903400:1:exon
so has part: feature:3905482-3905563:1:exon
so has part: feature:3907984-3908134:1:exon
so has part: feature:3910668-3910830:1:exon
so has part: feature:3911283-3911405:1:exon
so has part: feature:3912810-3913388:1:exon

position:3903212:1
position: 3903212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3903212-3903400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3905482-3905563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3907984-3908134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3910668-3910830:1:exon

position:3910668:1
position: 3910668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3911283-3911405:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3912810-3913388:1:exon

LOC116968927
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin target of PRMT1 protein isoform X1
translation: MDSAVQLRQRPYGAALPIAEHPSLIMSAPSTPKIVLKSTTKMSLNERFTNMLKNKQPPTVSIRATMQQQQLASARNRRLAQQMENRPSVQAALKLKQKSLKQRLGKSNIQARLGRPVGALARGPMVGRGSPRGGVRLGRGGRGGMRGGISLRGQGPNRGRGGMPRLGLKRGGMRGRGGLGRGGPPGRGGIGGRGRGGMVGRGRGGFPGRGRGRGRGRGATRPPLTREQLDNQLDAYMSKTKGHLDAELDAYMAQADGEANE
SIO_010081: LOC116968927
subclass of: SO_0000673
so part of: LOC116968927
location: join(3903343..3903400,3905482..3905563,3907984..3908134,3910665..3910830,3911283..3911405,3912810..3913015)
location: region:3903343-3913015:1
so has part: feature:3903343-3903400:1:exon
so has part: feature:3905482-3905563:1:exon
so has part: feature:3907984-3908134:1:exon
so has part: feature:3910665-3910830:1:exon
so has part: feature:3911283-3911405:1:exon
so has part: feature:3912810-3913015:1:exon

XP_032871809.1
type: Protein
SIO_000068: ncbiprotein

position:3903343:1
position: 3903343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3913015:1
position: 3913015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3903343-3903400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3905482-3905563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3907984-3908134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3910665-3910830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3911283-3911405:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3912810-3913015:1:exon

LOC116968927
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin target of PRMT1 protein isoform X2
translation: MDSAVQLRQRPYGAALPIAEHPSLIMSAPSTPKIVLKSTTKMSLNERFTNMLKNKQPPTVSIRATMQQQQLASARNRRLAQQMENRPSVQAALKLKQSLKQRLGKSNIQARLGRPVGALARGPMVGRGSPRGGVRLGRGGRGGMRGGISLRGQGPNRGRGGMPRLGLKRGGMRGRGGLGRGGPPGRGGIGGRGRGGMVGRGRGGFPGRGRGRGRGRGATRPPLTREQLDNQLDAYMSKTKGHLDAELDAYMAQADGEANE
SIO_010081: LOC116968927
subclass of: SO_0000673
so part of: LOC116968927
location: join(3903343..3903400,3905482..3905563,3907984..3908134,3910668..3910830,3911283..3911405,3912810..3913015)
location: region:3903343-3913015:1
so has part: feature:3903343-3903400:1:exon
so has part: feature:3905482-3905563:1:exon
so has part: feature:3907984-3908134:1:exon
so has part: feature:3910668-3910830:1:exon
so has part: feature:3911283-3911405:1:exon
so has part: feature:3912810-3913015:1:exon

XP_032871810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3903343-3903400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3905482-3905563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3907984-3908134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3910668-3910830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3911283-3911405:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3912810-3913015:1:exon

LOC116968878
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3920736..3974355
location: region:3920736-3974355:1
so has part: feature:3920736-3974355:1:exon
subclass of: SO_0000010

116968878
type: Gene
SIO_000068: ncbigene

position:3920736:1
position: 3920736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3974355:1
position: 3974355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3920736-3974355:1:exon

LOC116968878
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968878
product: mothers against decapentaplegic homolog 4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015855.1
SIO_010081: LOC116968878
subclass of: SO_0000673
so part of: LOC116968878
location: join(3920736..3920886,3940423..3940673,3957284..3957473,3960114..3960134,3962153..3962298,3962332..3962410,3964216..3964371,3965198..3965311,3966138..3966218,3967147..3967200,3968141..3968324,3970841..3971009,3971726..3971864,3974087..3974355)
location: region:3920736-3974355:1
so has part: feature:3920736-3920886:1:exon
so has part: feature:3940423-3940673:1:exon
so has part: feature:3957284-3957473:1:exon
so has part: feature:3960114-3960134:1:exon
so has part: feature:3962153-3962298:1:exon
so has part: feature:3962332-3962410:1:exon
so has part: feature:3964216-3964371:1:exon
so has part: feature:3965198-3965311:1:exon
so has part: feature:3966138-3966218:1:exon
so has part: feature:3967147-3967200:1:exon
so has part: feature:3968141-3968324:1:exon
so has part: feature:3970841-3971009:1:exon
so has part: feature:3971726-3971864:1:exon
so has part: feature:3974087-3974355:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3920736-3920886:1:exon

position:3920886:1
position: 3920886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3940423-3940673:1:exon

position:3940423:1
position: 3940423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3940673:1
position: 3940673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3957284-3957473:1:exon

position:3957284:1
position: 3957284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3957473:1
position: 3957473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3960114-3960134:1:exon

position:3960114:1
position: 3960114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3960134:1
position: 3960134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3962153-3962298:1:exon

position:3962153:1
position: 3962153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3962298:1
position: 3962298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3962332-3962410:1:exon

position:3962332:1
position: 3962332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3962410:1
position: 3962410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3964216-3964371:1:exon

position:3964216:1
position: 3964216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3964371:1
position: 3964371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3965198-3965311:1:exon

position:3965198:1
position: 3965198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3965311:1
position: 3965311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3966138-3966218:1:exon

position:3966138:1
position: 3966138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3966218:1
position: 3966218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3967147-3967200:1:exon

position:3967147:1
position: 3967147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3967200:1
position: 3967200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3968141-3968324:1:exon

position:3968141:1
position: 3968141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3968324:1
position: 3968324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3970841-3971009:1:exon

position:3970841:1
position: 3970841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3971009:1
position: 3971009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3971726-3971864:1:exon

position:3971726:1
position: 3971726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3971864:1
position: 3971864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3974087-3974355:1:exon

position:3974087:1
position: 3974087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968878
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968878
product: mothers against decapentaplegic homolog 4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015854.1
SIO_010081: LOC116968878
subclass of: SO_0000673
so part of: LOC116968878
location: join(3920737..3920886,3940423..3940673,3957284..3957473,3960114..3960134,3962153..3962298,3962332..3962410,3964213..3964371,3965198..3965311,3966138..3966218,3967147..3967200,3968141..3968324,3970841..3971009,3971726..3971864,3974087..3974354)
location: region:3920737-3974354:1
so has part: feature:3920737-3920886:1:exon
so has part: feature:3940423-3940673:1:exon
so has part: feature:3957284-3957473:1:exon
so has part: feature:3960114-3960134:1:exon
so has part: feature:3962153-3962298:1:exon
so has part: feature:3962332-3962410:1:exon
so has part: feature:3964213-3964371:1:exon
so has part: feature:3965198-3965311:1:exon
so has part: feature:3966138-3966218:1:exon
so has part: feature:3967147-3967200:1:exon
so has part: feature:3968141-3968324:1:exon
so has part: feature:3970841-3971009:1:exon
so has part: feature:3971726-3971864:1:exon
so has part: feature:3974087-3974354:1:exon

position:3920737:1
position: 3920737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3974354:1
position: 3974354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3920737-3920886:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3940423-3940673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3957284-3957473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3960114-3960134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3962153-3962298:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3962332-3962410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3964213-3964371:1:exon

position:3964213:1
position: 3964213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3965198-3965311:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3966138-3966218:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3967147-3967200:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3968141-3968324:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3970841-3971009:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3971726-3971864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3974087-3974354:1:exon

LOC116968878
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968878
product: mothers against decapentaplegic homolog 4-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015856.1
SIO_010081: LOC116968878
subclass of: SO_0000673
so part of: LOC116968878
location: join(3920738..3920886,3940423..3940673,3957284..3957458,3960114..3960134,3962153..3962298,3962332..3962410,3964213..3964371,3965198..3965311,3966138..3966218,3967147..3967200,3968141..3968324,3970841..3971009,3971726..3971864,3974087..3974354)
location: region:3920738-3974354:1
so has part: feature:3920738-3920886:1:exon
so has part: feature:3940423-3940673:1:exon
so has part: feature:3957284-3957458:1:exon
so has part: feature:3960114-3960134:1:exon
so has part: feature:3962153-3962298:1:exon
so has part: feature:3962332-3962410:1:exon
so has part: feature:3964213-3964371:1:exon
so has part: feature:3965198-3965311:1:exon
so has part: feature:3966138-3966218:1:exon
so has part: feature:3967147-3967200:1:exon
so has part: feature:3968141-3968324:1:exon
so has part: feature:3970841-3971009:1:exon
so has part: feature:3971726-3971864:1:exon
so has part: feature:3974087-3974354:1:exon

position:3920738:1
position: 3920738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3920738-3920886:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3940423-3940673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3957284-3957458:1:exon

position:3957458:1
position: 3957458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3960114-3960134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3962153-3962298:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3962332-3962410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3964213-3964371:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3965198-3965311:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3966138-3966218:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3967147-3967200:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3968141-3968324:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3970841-3971009:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3971726-3971864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3974087-3974354:1:exon

LOC116968878
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 4-like isoform X1
translation: MSLNPPTSNDACLSIVHSLMCHRQGGENESFAKRAIESLVKKLKEKKDELDSLITAITTNGSHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHAKFCQFAFDLKYDSVCVNPYHYERVVSPGIGEWQIGLSLQNTAPPSRLVKDEFIHECVQLDCAQVMPHAEEQANHPPRTLLPTEPYAQPLPPPPVLPIPETSRPTVHSYPNIPLSPPPASSSLNSMNNSEGLLQIAPPLQQMAPPPTPPPTAPPHPSQQNGYPPLKPPYHNTTATWMGSSTAAYSPSIGPQQNGHGQHQQSLHHPSHYCQTSQSAVMPFLLRHAAPSPQPLAAHNGSSHHNGAPYQQPISNHPGPEFWCSITYFEMDVQVGEMFKVPASCPVVTVDGYVDPSGGDRFCLGQLSNVHRTDASEKARLHIGKGIQLECRGEGDVWMRCLSDHAVFVQSYYLDREAGRAPGDAVHKIYPGAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAPAVSLSAAAGIGVDDLRRLCILRLSFVKGWGPDYPRQSIKHTPCWIEVHLHRALQLLDEVLHTMPIADPGSVH
SIO_010081: LOC116968878
subclass of: SO_0000673
so part of: LOC116968878
location: join(3940437..3940673,3957284..3957473,3960114..3960134,3962153..3962298,3962332..3962410,3964213..3964371,3965198..3965311,3966138..3966218,3967147..3967200,3968141..3968324,3970841..3971009,3971726..3971864,3974087..3974298)
location: region:3940437-3974298:1
so has part: feature:3940437-3940673:1:exon
so has part: feature:3957284-3957473:1:exon
so has part: feature:3960114-3960134:1:exon
so has part: feature:3962153-3962298:1:exon
so has part: feature:3962332-3962410:1:exon
so has part: feature:3964213-3964371:1:exon
so has part: feature:3965198-3965311:1:exon
so has part: feature:3966138-3966218:1:exon
so has part: feature:3967147-3967200:1:exon
so has part: feature:3968141-3968324:1:exon
so has part: feature:3970841-3971009:1:exon
so has part: feature:3971726-3971864:1:exon
so has part: feature:3974087-3974298:1:exon

XP_032871745.1
type: Protein
SIO_000068: ncbiprotein

position:3940437:1
position: 3940437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3974298:1
position: 3974298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3940437-3940673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3957284-3957473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3960114-3960134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3962153-3962298:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3962332-3962410:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3964213-3964371:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3965198-3965311:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3966138-3966218:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3967147-3967200:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3968141-3968324:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3970841-3971009:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3971726-3971864:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3974087-3974298:1:exon

LOC116968878
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 4-like isoform X2
translation: MSLNPPTSNDACLSIVHSLMCHRQGGENESFAKRAIESLVKKLKEKKDELDSLITAITTNGSHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHAKFCQFAFDLKYDSVCVNPYHYERVVSPGIGEWQIGLSLQNTAPPSRLVKDEFIHECVQLDCAQVMPHAEEQANHPPRTLLPTEPYAQPLPPPPVLPIPETSRPTVHSYPNIPLSPPPSSSLNSMNNSEGLLQIAPPLQQMAPPPTPPPTAPPHPSQQNGYPPLKPPYHNTTATWMGSSTAAYSPSIGPQQNGHGQHQQSLHHPSHYCQTSQSAVMPFLLRHAAPSPQPLAAHNGSSHHNGAPYQQPISNHPGPEFWCSITYFEMDVQVGEMFKVPASCPVVTVDGYVDPSGGDRFCLGQLSNVHRTDASEKARLHIGKGIQLECRGEGDVWMRCLSDHAVFVQSYYLDREAGRAPGDAVHKIYPGAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAPAVSLSAAAGIGVDDLRRLCILRLSFVKGWGPDYPRQSIKHTPCWIEVHLHRALQLLDEVLHTMPIADPGSVH
SIO_010081: LOC116968878
subclass of: SO_0000673
so part of: LOC116968878
location: join(3940437..3940673,3957284..3957473,3960114..3960134,3962153..3962298,3962332..3962410,3964216..3964371,3965198..3965311,3966138..3966218,3967147..3967200,3968141..3968324,3970841..3971009,3971726..3971864,3974087..3974298)
location: region:3940437-3974298:1
so has part: feature:3940437-3940673:1:exon
so has part: feature:3957284-3957473:1:exon
so has part: feature:3960114-3960134:1:exon
so has part: feature:3962153-3962298:1:exon
so has part: feature:3962332-3962410:1:exon
so has part: feature:3964216-3964371:1:exon
so has part: feature:3965198-3965311:1:exon
so has part: feature:3966138-3966218:1:exon
so has part: feature:3967147-3967200:1:exon
so has part: feature:3968141-3968324:1:exon
so has part: feature:3970841-3971009:1:exon
so has part: feature:3971726-3971864:1:exon
so has part: feature:3974087-3974298:1:exon

XP_032871746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3940437-3940673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3957284-3957473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3960114-3960134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3962153-3962298:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3962332-3962410:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3964216-3964371:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3965198-3965311:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3966138-3966218:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3967147-3967200:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3968141-3968324:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3970841-3971009:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3971726-3971864:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3974087-3974298:1:exon

LOC116968878
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 4-like isoform X3
translation: MSLNPPTSNDACLSIVHSLMCHRQGGENESFAKRAIESLVKKLKEKKDELDSLITAITTNGSHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHAKFCQFAFDLKYDSVCVNPYHYERVVSPGIGLSLQNTAPPSRLVKDEFIHECVQLDCAQVMPHAEEQANHPPRTLLPTEPYAQPLPPPPVLPIPETSRPTVHSYPNIPLSPPPASSSLNSMNNSEGLLQIAPPLQQMAPPPTPPPTAPPHPSQQNGYPPLKPPYHNTTATWMGSSTAAYSPSIGPQQNGHGQHQQSLHHPSHYCQTSQSAVMPFLLRHAAPSPQPLAAHNGSSHHNGAPYQQPISNHPGPEFWCSITYFEMDVQVGEMFKVPASCPVVTVDGYVDPSGGDRFCLGQLSNVHRTDASEKARLHIGKGIQLECRGEGDVWMRCLSDHAVFVQSYYLDREAGRAPGDAVHKIYPGAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAPAVSLSAAAGIGVDDLRRLCILRLSFVKGWGPDYPRQSIKHTPCWIEVHLHRALQLLDEVLHTMPIADPGSVH
SIO_010081: LOC116968878
subclass of: SO_0000673
so part of: LOC116968878
location: join(3940437..3940673,3957284..3957458,3960114..3960134,3962153..3962298,3962332..3962410,3964213..3964371,3965198..3965311,3966138..3966218,3967147..3967200,3968141..3968324,3970841..3971009,3971726..3971864,3974087..3974298)
location: region:3940437-3974298:1
so has part: feature:3940437-3940673:1:exon
so has part: feature:3957284-3957458:1:exon
so has part: feature:3960114-3960134:1:exon
so has part: feature:3962153-3962298:1:exon
so has part: feature:3962332-3962410:1:exon
so has part: feature:3964213-3964371:1:exon
so has part: feature:3965198-3965311:1:exon
so has part: feature:3966138-3966218:1:exon
so has part: feature:3967147-3967200:1:exon
so has part: feature:3968141-3968324:1:exon
so has part: feature:3970841-3971009:1:exon
so has part: feature:3971726-3971864:1:exon
so has part: feature:3974087-3974298:1:exon

XP_032871747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3940437-3940673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3957284-3957458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3960114-3960134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3962153-3962298:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3962332-3962410:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3964213-3964371:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3965198-3965311:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3966138-3966218:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3967147-3967200:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3968141-3968324:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3970841-3971009:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3971726-3971864:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3974087-3974298:1:exon

LOC116968888
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4004655..4007737
location: region:4004655-4007737:1
so has part: feature:4004655-4007737:1:exon
subclass of: SO_0000010

116968888
type: Gene
SIO_000068: ncbigene

position:4004655:1
position: 4004655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4007737:1
position: 4007737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4004655-4007737:1:exon

LOC116968888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968888
product: Ig heavy chain Mem5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015867.1
SIO_010081: LOC116968888
subclass of: SO_0000673
so part of: LOC116968888
location: join(4004655..4004670,4005274..4005600,4006446..4006736,4007580..4007737)
location: region:4004655-4007737:1
so has part: feature:4004655-4004670:1:exon
so has part: feature:4005274-4005600:1:exon
so has part: feature:4006446-4006736:1:exon
so has part: feature:4007580-4007737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4004655-4004670:1:exon

position:4004670:1
position: 4004670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4005274-4005600:1:exon

position:4005274:1
position: 4005274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4005600:1
position: 4005600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4006446-4006736:1:exon

position:4006446:1
position: 4006446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4006736:1
position: 4006736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4007580-4007737:1:exon

position:4007580:1
position: 4007580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Ig heavy chain Mem5-like
translation: MPVYRVSRASMFQSPAVLTVRVGDRAVLTCSQNVRVYPGASINWFIQSGRGRLQFVYTTSKFMPSKGRFSGILDKDPGNYALVIENVQQNDSGIYVCAAQLDSRFGNGSKLVVTAGPVTIFLLSPPSGEIHQTQPVPLVCVVRGASSDSVQIHWNISGDVSKGLVDSGTFDPDGSYSVRSRFQISAERWLSGAVCTCVAGDLTSDGVAAQKELPVFTTDSAAQIFRSTQALYKCGRSLCLGLAFRSQHPLGKILFINAASRII
SIO_010081: LOC116968888
subclass of: SO_0000673
so part of: LOC116968888
location: join(4004655..4004670,4005274..4005600,4006446..4006736,4007580..4007737)
location: region:4004655-4007737:1
so has part: feature:4004655-4004670:1:exon
so has part: feature:4005274-4005600:1:exon
so has part: feature:4006446-4006736:1:exon
so has part: feature:4007580-4007737:1:exon

XP_032871758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4004655-4004670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4005274-4005600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4006446-4006736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4007580-4007737:1:exon

LOC116968937
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4023916..4025823)
location: region:4023916-4025823:-1
so has part: feature:4023916-4025823:-1:exon
subclass of: SO_0000011

116968937
type: Gene
SIO_000068: ncbigene

position:4023916:-1
position: 4023916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4025823:-1
position: 4025823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4023916-4025823:-1:exon

LOC116968937
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968937
product: uncharacterized LOC116968937
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004410557.1
SIO_010081: LOC116968937
subclass of: SO_0000673
so part of: LOC116968937
location: complement(join(4023916..4024233,4024882..4024931,4025736..4025823))
location: region:4023916-4025823:-1
so has part: feature:4025736-4025823:-1:exon
so has part: feature:4024882-4024931:-1:exon
so has part: feature:4023916-4024233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4025736-4025823:-1:exon

position:4025736:-1
position: 4025736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4024882-4024931:-1:exon

position:4024882:-1
position: 4024882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4024931:-1
position: 4024931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4023916-4024233:-1:exon

position:4024233:-1
position: 4024233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968889
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4027186..4032302)
location: region:4027186-4032302:-1
so has part: feature:4027186-4032302:-1:exon
subclass of: SO_0000010

116968889
type: Gene
SIO_000068: ncbigene

position:4027186:-1
position: 4027186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4032302:-1
position: 4032302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4027186-4032302:-1:exon

LOC116968889
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968889
product: uncharacterized LOC116968889
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015868.1
SIO_010081: LOC116968889
subclass of: SO_0000673
so part of: LOC116968889
location: complement(join(4027186..4027577,4027655..4028056,4029370..4029553,4032042..4032302))
location: region:4027186-4032302:-1
so has part: feature:4032042-4032302:-1:exon
so has part: feature:4029370-4029553:-1:exon
so has part: feature:4027655-4028056:-1:exon
so has part: feature:4027186-4027577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4032042-4032302:-1:exon

position:4032042:-1
position: 4032042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4029370-4029553:-1:exon

position:4029370:-1
position: 4029370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4029553:-1
position: 4029553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4027655-4028056:-1:exon

position:4027655:-1
position: 4027655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4028056:-1
position: 4028056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4027186-4027577:-1:exon

position:4027577:-1
position: 4027577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968889
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116968889
translation: MGYVCVHSPVTPNTAPGDRRIKDGATSSDGRKERDIGFNLDLPLTRTSVNVTLARWRSDQSHTMAVTWTLFSRAGYQAETGSQDQHQWFWTRRPRPRKLAPSITEPEAEPKRLNSPQSDNLAGSAAPAGHISMDALPLVFVVQVFRVCATRFCPSSSRHLTDNFNLRDMFPVAGFGPFPSGARDVVTADVGQTVELSCKTEYKVEIADHVLWYKQRADQAPIAIKTIGCAQTGCRATLDKGPGDNTSTLRIRDAQVDDSGVYYCYGRDNYASFARGLTLLVGDSSTNETSLLVFVPQIETNDSAPLVCQVSGLSSNVVVIYWNISGQLTEGRSDSGRIETDHSYSVRSQVLVPAGVWWGGEICTCIVQMGSADKTRTKSVSRPIPTPDHGELEHGTGEIMFIKVSSAVQCLC
SIO_010081: LOC116968889
subclass of: SO_0000673
so part of: LOC116968889
location: complement(join(4027186..4027577,4027655..4028056,4029370..4029553,4032042..4032302))
location: region:4027186-4032302:-1
so has part: feature:4032042-4032302:-1:exon
so has part: feature:4029370-4029553:-1:exon
so has part: feature:4027655-4028056:-1:exon
so has part: feature:4027186-4027577:-1:exon

XP_032871759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4032042-4032302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4029370-4029553:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4027655-4028056:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4027186-4027577:-1:exon

tdrkh
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tdrkh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4032593..4050411)
location: region:4032593-4050411:-1
so has part: feature:4032593-4050411:-1:exon
subclass of: SO_0000010

116968936
type: Gene
SIO_000068: ncbigene

position:4032593:-1
position: 4032593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4050411:-1
position: 4050411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4032593-4050411:-1:exon

tdrkh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tdrkh
product: tudor and KH domain containing
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033015931.1
SIO_010081: tdrkh
subclass of: SO_0000673
so part of: tdrkh
location: complement(join(4032593..4034518,4035417..4035495,4035998..4036094,4037029..4037160,4038280..4038431,4040339..4040403,4041146..4041318,4041789..4041955,4043425..4043749,4043893..4044035,4044554..4044761,4045841..4045947,4048271..4048448,4050372..4050411))
location: region:4032593-4050411:-1
so has part: feature:4050372-4050411:-1:exon
so has part: feature:4048271-4048448:-1:exon
so has part: feature:4045841-4045947:-1:exon
so has part: feature:4044554-4044761:-1:exon
so has part: feature:4043893-4044035:-1:exon
so has part: feature:4043425-4043749:-1:exon
so has part: feature:4041789-4041955:-1:exon
so has part: feature:4041146-4041318:-1:exon
so has part: feature:4040339-4040403:-1:exon
so has part: feature:4038280-4038431:-1:exon
so has part: feature:4037029-4037160:-1:exon
so has part: feature:4035998-4036094:-1:exon
so has part: feature:4035417-4035495:-1:exon
so has part: feature:4032593-4034518:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4050372-4050411:-1:exon

position:4050372:-1
position: 4050372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4048271-4048448:-1:exon

position:4048271:-1
position: 4048271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4048448:-1
position: 4048448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4045841-4045947:-1:exon

position:4045841:-1
position: 4045841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4045947:-1
position: 4045947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4044554-4044761:-1:exon

position:4044554:-1
position: 4044554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4044761:-1
position: 4044761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4043893-4044035:-1:exon

position:4043893:-1
position: 4043893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4044035:-1
position: 4044035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4043425-4043749:-1:exon

position:4043425:-1
position: 4043425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4043749:-1
position: 4043749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4041789-4041955:-1:exon

position:4041789:-1
position: 4041789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4041955:-1
position: 4041955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4041146-4041318:-1:exon

position:4041146:-1
position: 4041146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4041318:-1
position: 4041318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4040339-4040403:-1:exon

position:4040339:-1
position: 4040339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4040403:-1
position: 4040403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4038280-4038431:-1:exon

position:4038280:-1
position: 4038280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4038431:-1
position: 4038431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4037029-4037160:-1:exon

position:4037029:-1
position: 4037029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4037160:-1
position: 4037160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4035998-4036094:-1:exon

position:4035998:-1
position: 4035998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4036094:-1
position: 4036094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4035417-4035495:-1:exon

position:4035417:-1
position: 4035417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4035495:-1
position: 4035495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4032593-4034518:-1:exon

position:4034518:-1
position: 4034518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tdrkh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tdrkh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tudor and KH domain-containing protein
translation: MSAHSAWSSLTTTQKVLLAVGLPAGAAVAYVFYRRYSESLGEHCVLVGDNQIAVDMKVPRDSVKLIVGRQGTTIQQLRRETGARIDMEGGEEWADEGGAAERKLTIVGAPVQVCKARAAIRRLLAHGARVTEELHVPPHTVGRIIGRGGESIRAMCRATGARIVCEKHPGDGAVGFGRVVSISGTKQEVTSAKALVVAKMEEEEMFRQQLACSAAGRRHRKHPAGRRTDGEMPSTALAPGQSPALAPAPAAPGSPQRGEWMPGHSREEEQEHRTEPTLGVGGEEDTAGGERVANHQHTKFEIPSPDFSFLADEHLEVYVSASENPGHFWIQILGSRCLQLDNLCSEMSRYYNNSSTAGEAFVPKMGDIVAAPFQNDGFWYRACVLGFLQNGNADLYYVDYGDNGEAALANIQVLRSDFLSLPFQAVECSLDGIRPVGESWSEEAMNCFDGLAHCAEWKVLLARICSYLQSEGVTRPRVQLFDRSQGKSVDIGEELVRQGHAVRCPRGDGATAADGADTHWMVAPTNLQTLLNDVTGATDGCAVSEATAGSTKPQLSESWQSFAGHPLGSSSGAVPADDEFL
SIO_010081: tdrkh
subclass of: SO_0000673
so part of: tdrkh
location: complement(join(4035440..4035495,4035998..4036094,4037029..4037160,4038280..4038431,4040339..4040403,4041146..4041318,4041789..4041955,4043425..4043749,4043893..4044035,4044554..4044761,4045841..4045947,4048271..4048391))
location: region:4035440-4048391:-1
so has part: feature:4048271-4048391:-1:exon
so has part: feature:4045841-4045947:-1:exon
so has part: feature:4044554-4044761:-1:exon
so has part: feature:4043893-4044035:-1:exon
so has part: feature:4043425-4043749:-1:exon
so has part: feature:4041789-4041955:-1:exon
so has part: feature:4041146-4041318:-1:exon
so has part: feature:4040339-4040403:-1:exon
so has part: feature:4038280-4038431:-1:exon
so has part: feature:4037029-4037160:-1:exon
so has part: feature:4035998-4036094:-1:exon
so has part: feature:4035440-4035495:-1:exon

XP_032871822.1
type: Protein
SIO_000068: ncbiprotein

position:4035440:-1
position: 4035440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4048391:-1
position: 4048391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4048271-4048391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4045841-4045947:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4044554-4044761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4043893-4044035:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4043425-4043749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4041789-4041955:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4041146-4041318:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4040339-4040403:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4038280-4038431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4037029-4037160:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4035998-4036094:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4035440-4035495:-1:exon

LOC116968890
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4050698..4091447
location: region:4050698-4091447:1
so has part: feature:4050698-4091447:1:exon
subclass of: SO_0000010

116968890
type: Gene
SIO_000068: ncbigene

position:4050698:1
position: 4050698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4091447:1
position: 4091447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4050698-4091447:1:exon

LOC116968890
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968890
product: semaphorin-4B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015869.1
SIO_010081: LOC116968890
subclass of: SO_0000673
so part of: LOC116968890
location: join(4050698..4050865,4057779..4057883,4075923..4076034,4080111..4080225,4086838..4087046,4087420..4087580,4087914..4087976,4088252..4088350,4088704..4088815,4089549..4089736,4091349..4091447)
location: region:4050698-4091447:1
so has part: feature:4050698-4050865:1:exon
so has part: feature:4057779-4057883:1:exon
so has part: feature:4075923-4076034:1:exon
so has part: feature:4080111-4080225:1:exon
so has part: feature:4086838-4087046:1:exon
so has part: feature:4087420-4087580:1:exon
so has part: feature:4087914-4087976:1:exon
so has part: feature:4088252-4088350:1:exon
so has part: feature:4088704-4088815:1:exon
so has part: feature:4089549-4089736:1:exon
so has part: feature:4091349-4091447:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4050698-4050865:1:exon

position:4050865:1
position: 4050865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4057779-4057883:1:exon

position:4057779:1
position: 4057779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4057883:1
position: 4057883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4075923-4076034:1:exon

position:4075923:1
position: 4075923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4076034:1
position: 4076034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4080111-4080225:1:exon

position:4080111:1
position: 4080111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4080225:1
position: 4080225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4086838-4087046:1:exon

position:4086838:1
position: 4086838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4087046:1
position: 4087046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4087420-4087580:1:exon

position:4087420:1
position: 4087420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4087580:1
position: 4087580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4087914-4087976:1:exon

position:4087914:1
position: 4087914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4087976:1
position: 4087976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4088252-4088350:1:exon

position:4088252:1
position: 4088252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4088350:1
position: 4088350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4088704-4088815:1:exon

position:4088704:1
position: 4088704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4088815:1
position: 4088815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4089549-4089736:1:exon

position:4089549:1
position: 4089549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4089736:1
position: 4089736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4091349-4091447:1:exon

position:4091349:1
position: 4091349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968934
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4054635..4069720)
location: region:4054635-4069720:-1
so has part: feature:4054635-4069720:-1:exon
subclass of: SO_0000010

116968934
type: Gene
SIO_000068: ncbigene

position:4054635:-1
position: 4054635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4069720:-1
position: 4069720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4054635-4069720:-1:exon

LOC116968934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968934
product: semaphorin-7A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033015929.1
SIO_010081: LOC116968934
subclass of: SO_0000673
so part of: LOC116968934
location: complement(join(4054635..4055258,4056669..4056718,4058055..4058227,4058987..4059102,4060294..4060483,4061311..4061422,4062798..4062979,4063997..4064136,4065049..4065156,4066343..4066454,4066555..4066653,4068133..4068195,4068521..4068660,4069584..4069720))
location: region:4054635-4069720:-1
so has part: feature:4069584-4069720:-1:exon
so has part: feature:4068521-4068660:-1:exon
so has part: feature:4068133-4068195:-1:exon
so has part: feature:4066555-4066653:-1:exon
so has part: feature:4066343-4066454:-1:exon
so has part: feature:4065049-4065156:-1:exon
so has part: feature:4063997-4064136:-1:exon
so has part: feature:4062798-4062979:-1:exon
so has part: feature:4061311-4061422:-1:exon
so has part: feature:4060294-4060483:-1:exon
so has part: feature:4058987-4059102:-1:exon
so has part: feature:4058055-4058227:-1:exon
so has part: feature:4056669-4056718:-1:exon
so has part: feature:4054635-4055258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4069584-4069720:-1:exon

position:4069584:-1
position: 4069584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4068521-4068660:-1:exon

position:4068521:-1
position: 4068521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4068660:-1
position: 4068660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4068133-4068195:-1:exon

position:4068133:-1
position: 4068133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4068195:-1
position: 4068195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4066555-4066653:-1:exon

position:4066555:-1
position: 4066555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4066653:-1
position: 4066653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4066343-4066454:-1:exon

position:4066343:-1
position: 4066343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4066454:-1
position: 4066454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4065049-4065156:-1:exon

position:4065049:-1
position: 4065049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4065156:-1
position: 4065156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4063997-4064136:-1:exon

position:4063997:-1
position: 4063997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4064136:-1
position: 4064136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4062798-4062979:-1:exon

position:4062798:-1
position: 4062798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4062979:-1
position: 4062979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4061311-4061422:-1:exon

position:4061311:-1
position: 4061311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4061422:-1
position: 4061422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4060294-4060483:-1:exon

position:4060294:-1
position: 4060294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4060483:-1
position: 4060483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4058987-4059102:-1:exon

position:4058987:-1
position: 4058987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4059102:-1
position: 4059102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4058055-4058227:-1:exon

position:4058055:-1
position: 4058055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4058227:-1
position: 4058227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4056669-4056718:-1:exon

position:4056669:-1
position: 4056669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4056718:-1
position: 4056718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4054635-4055258:-1:exon

position:4055258:-1
position: 4055258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-7A-like
translation: MLKPRLLFVVQQLLLLLLLGAAERLPRLKITPTDEPRVQFAAPAAAWVGHHDPSSDTLYVGATGGVWLLRFSGRNVSRTQIPLPLEESVRQRCQSERPGSQELCKNVVTVIERFNRSTIMVCGTHAGSPKCWFLAVNGTQLARDHEGRELVKDGREISPSTPIQRPVTITVDEAVYSAIPSSSQSSGSIELSYGRPKRLKTGDRWMQSPTFVGAAWMQMKDSSKDEVYFFFRESNESSALDGEPYRAYIGRVCKVDEGVLKAATQEPFSTFLKARMICGFPAESRLFNKIEDAFLLSVEDDPRSSVVYGIFSSLWNSTAVCAYSQADIERAFRNSRLKGLTANVIGSHRPGMCVKGNVPRNVLTNIRNFPEIEDPIYPIKRHPLYVMKHNNYTRVTADRVRGANQQIYHVLFLGTGNGKIHKVLHYNGKSFIISELSPFKSQAPVSTIMLDSSTGHLFVATPMEAARLSLAGCAEYGHTCPRCVAARDPYCGWDRATHKCVALPQTLNTTDSDILQNVEQLNVSICDSDDVLSGGEVTQLMVSAGAYLYLPCPVTSYHAAYSWKHEERDGIPCTVKDGSCPLMFDGHMPVSDGSFTCFATEDGLEERVATYFVRLNSGSRPGQGGTTLALALGMAALCSML
SIO_010081: LOC116968934
subclass of: SO_0000673
so part of: LOC116968934
location: complement(join(4054918..4055258,4056669..4056718,4058055..4058227,4058987..4059102,4060294..4060483,4061311..4061422,4062798..4062979,4063997..4064136,4065049..4065156,4066343..4066454,4066555..4066653,4068133..4068195,4068521..4068660,4069584..4069683))
location: region:4054918-4069683:-1
so has part: feature:4069584-4069683:-1:exon
so has part: feature:4068521-4068660:-1:exon
so has part: feature:4068133-4068195:-1:exon
so has part: feature:4066555-4066653:-1:exon
so has part: feature:4066343-4066454:-1:exon
so has part: feature:4065049-4065156:-1:exon
so has part: feature:4063997-4064136:-1:exon
so has part: feature:4062798-4062979:-1:exon
so has part: feature:4061311-4061422:-1:exon
so has part: feature:4060294-4060483:-1:exon
so has part: feature:4058987-4059102:-1:exon
so has part: feature:4058055-4058227:-1:exon
so has part: feature:4056669-4056718:-1:exon
so has part: feature:4054918-4055258:-1:exon

XP_032871820.1
type: Protein
SIO_000068: ncbiprotein

position:4054918:-1
position: 4054918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4069683:-1
position: 4069683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4069584-4069683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4068521-4068660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4068133-4068195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4066555-4066653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4066343-4066454:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4065049-4065156:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4063997-4064136:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4062798-4062979:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4061311-4061422:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4060294-4060483:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4058987-4059102:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4058055-4058227:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4056669-4056718:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4054918-4055258:-1:exon

LOC116968935
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4071809..4077434)
location: region:4071809-4077434:-1
so has part: feature:4071809-4077434:-1:exon
subclass of: SO_0000010

116968935
type: Gene
SIO_000068: ncbigene

position:4071809:-1
position: 4071809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4077434:-1
position: 4077434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4071809-4077434:-1:exon

LOC116968935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968935
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015930.1
SIO_010081: LOC116968935
subclass of: SO_0000673
so part of: LOC116968935
location: complement(join(4071809..4073595,4076817..4077434))
location: region:4071809-4077434:-1
so has part: feature:4076817-4077434:-1:exon
so has part: feature:4071809-4073595:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4076817-4077434:-1:exon

position:4076817:-1
position: 4076817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4071809-4073595:-1:exon

position:4073595:-1
position: 4073595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4
translation: MLLPGTARPCPLCLPVMCPALSLVLLACVCACGVSQDCPPSCECGWGNGTVSCRGGELPAIPGWLPPATRMLDLSGNLIASVGRGALANLSELLELDLRDNLISNMEPGALSSLGRLQILRLDGNRLKTVWPGTLASMANLTTLGLSRNPLLLLLDDTFQGLDNLGSLDLGEELVYVGARAFEGLVGLHHLSLTQAETGTLPSAALSRLPGLETLRVSGLGATLLAGDSFPGLARLRELRVESWRSLESLHRDALAGLNLTTLAITRCNLSRVPGEALAHLVYLRSLDLSHNPVVTMAGDALPGLPRLAELRLVGGLLSHIQAGALHGLGSLRLLDVTGNRLATLEAGALPSVGGLAWLGLASNPLACDCRLAWAVGRGRGLEWGPGPTVCAGPGDLRGRELAELGQGRGAGLSACTKPTVRAEAGVVTVGEGQTVSLPCQAQGEPRPTVSWTTPAGSQLGPGDASRLRVLPDGSLQVRLAQAWDAGVYVCTASNAAGTHSAPTRLLVWTGPGSSPVLGPQALWVVMSLGLACFLGVTGLCFTMLLVWSRWQGPIKRNSSVEVLRNPSNSDTQSEAIKYTTKML
SIO_010081: LOC116968935
subclass of: SO_0000673
so part of: LOC116968935
location: complement(4071832..4073586)
location: region:4071832-4073586:-1
so has part: feature:4071832-4073586:-1:exon

XP_032871821.1
type: Protein
SIO_000068: ncbiprotein

position:4071832:-1
position: 4071832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4073586:-1
position: 4073586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4071832-4073586:-1:exon

LOC116968890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4B-like
translation: MDMCLHRTLLTLAMMVTSVPADPPTEPRPRLCHAAGDPRRRLGRFSGESSANYSCLLLSSDGQRLYVGGRDQILSLHTLTFSSTTAVDQIRWRATDAKIQECWSKGKSKQRDCFNFIVAVLPVNESCLYACGTYAYSPTCTYIDTRTFSLRTAVDKQPLTEDCKGRVPFDPALRFTAAMVEGALYSGTSGNFLGTQHVISRSLGHQVPLKTEASLSWLQGRNVMLCSGTNVDRALSTSGQGTPLRQRKAVSSCFLCTVDILGLSEEFAKSVNERY
SIO_010081: LOC116968890
subclass of: SO_0000673
so part of: LOC116968890
location: join(4086941..4087046,4087420..4087580,4087914..4087976,4088252..4088350,4088704..4088815,4089549..4089736,4091349..4091447)
location: region:4086941-4091447:1
so has part: feature:4086941-4087046:1:exon
so has part: feature:4087420-4087580:1:exon
so has part: feature:4087914-4087976:1:exon
so has part: feature:4088252-4088350:1:exon
so has part: feature:4088704-4088815:1:exon
so has part: feature:4089549-4089736:1:exon
so has part: feature:4091349-4091447:1:exon

XP_032871760.1
type: Protein
SIO_000068: ncbiprotein

position:4086941:1
position: 4086941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4086941-4087046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4087420-4087580:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4087914-4087976:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4088252-4088350:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4088704-4088815:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4089549-4089736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4091349-4091447:1:exon

LOC116968891
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968891
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4091481..4144105)
location: region:4091481-4144105:-1
so has part: feature:4091481-4144105:-1:exon
subclass of: SO_0000010

116968891
type: Gene
SIO_000068: ncbigene

position:4091481:-1
position: 4091481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4144105:-1
position: 4144105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4091481-4144105:-1:exon

LOC116968891
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968891
product: integrin alpha-11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015871.1
SIO_010081: LOC116968891
subclass of: SO_0000673
so part of: LOC116968891
location: complement(join(4091481..4091509,4091743..4091911,4092668..4092816,4096274..4096418,4104124..4104197,4105013..4105178,4107160..4107310,4109439..4109587,4114293..4114420,4116623..4116737,4119244..4119329,4123586..4123695,4135932..4136043,4143455..4144105))
location: region:4091481-4144105:-1
so has part: feature:4143455-4144105:-1:exon
so has part: feature:4135932-4136043:-1:exon
so has part: feature:4123586-4123695:-1:exon
so has part: feature:4119244-4119329:-1:exon
so has part: feature:4116623-4116737:-1:exon
so has part: feature:4114293-4114420:-1:exon
so has part: feature:4109439-4109587:-1:exon
so has part: feature:4107160-4107310:-1:exon
so has part: feature:4105013-4105178:-1:exon
so has part: feature:4104124-4104197:-1:exon
so has part: feature:4096274-4096418:-1:exon
so has part: feature:4092668-4092816:-1:exon
so has part: feature:4091743-4091911:-1:exon
so has part: feature:4091481-4091509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4143455-4144105:-1:exon

position:4143455:-1
position: 4143455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4135932-4136043:-1:exon

position:4135932:-1
position: 4135932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4136043:-1
position: 4136043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4123586-4123695:-1:exon

position:4123586:-1
position: 4123586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4123695:-1
position: 4123695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4119244-4119329:-1:exon

position:4119244:-1
position: 4119244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4119329:-1
position: 4119329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4116623-4116737:-1:exon

position:4116623:-1
position: 4116623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4116737:-1
position: 4116737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4114293-4114420:-1:exon

position:4114293:-1
position: 4114293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4114420:-1
position: 4114420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4109439-4109587:-1:exon

position:4109439:-1
position: 4109439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4109587:-1
position: 4109587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4107160-4107310:-1:exon

position:4107160:-1
position: 4107160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4107310:-1
position: 4107310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4105013-4105178:-1:exon

position:4105013:-1
position: 4105013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4105178:-1
position: 4105178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4104124-4104197:-1:exon

position:4104124:-1
position: 4104124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4104197:-1
position: 4104197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4096274-4096418:-1:exon

position:4096274:-1
position: 4096274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4096418:-1
position: 4096418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4092668-4092816:-1:exon

position:4092668:-1
position: 4092668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4092816:-1
position: 4092816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4091743-4091911:-1:exon

position:4091743:-1
position: 4091743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4091911:-1
position: 4091911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4091481-4091509:-1:exon

position:4091509:-1
position: 4091509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968891
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968891
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-11-like
translation: MEFNRCSVILYFLAVWKGFSDSFNINVKDAKTFNGPKKGQFGYKVQQQEAEGQKWLLVSAPWEGSAKNKKGAIYRCKVSNRKSTNCMKLNSGEAALKNISDKMKDMHFGMTLTRNSQGFMVCAPLWAQQCGTSMYNTGICTNISRNFRPSGIIAPTAQDCGVTMDIVILLDGSNSIYPWHEVQRFLSNALHKFHIGPKQIQIGVLQYAETVVHEFHLGQHKTARAVIAAAKNISRQGGRETKTAMAIRAACSDAFSRERGGRDGASKVMVVVTDGESHDGLHLRDSLAECEKRNISRYAIAVLGHYIRRRKDTETFIREIKFIASDPDEKHFFNVSDEAALNDIVDALGDRIFGLEGMIYHNESSFELEMSQAGFSAHVLENGFLLGAVGAYDWNGAVVRQSAHGHVITSREALSKEFPKALNNHAAYLGYTVSSLKQRSGQSVYVAGAPRYKHKGKVILFNMDTTGNVTIHQSLVGEQIGSYFGSEVCPVDVDGDQVTDVLLVAAPMYLGAGYKETGKVYVYTVREVSVEHGVWRKLYDSLGD
SIO_010081: LOC116968891
subclass of: SO_0000673
so part of: LOC116968891
location: complement(join(4091481..4091509,4091743..4091911,4092668..4092816,4096274..4096418,4104124..4104197,4105013..4105178,4107160..4107310,4109439..4109587,4114293..4114420,4116623..4116737,4119244..4119329,4123586..4123695,4135932..4136043,4143455..4143506))
location: region:4091481-4143506:-1
so has part: feature:4143455-4143506:-1:exon
so has part: feature:4135932-4136043:-1:exon
so has part: feature:4123586-4123695:-1:exon
so has part: feature:4119244-4119329:-1:exon
so has part: feature:4116623-4116737:-1:exon
so has part: feature:4114293-4114420:-1:exon
so has part: feature:4109439-4109587:-1:exon
so has part: feature:4107160-4107310:-1:exon
so has part: feature:4105013-4105178:-1:exon
so has part: feature:4104124-4104197:-1:exon
so has part: feature:4096274-4096418:-1:exon
so has part: feature:4092668-4092816:-1:exon
so has part: feature:4091743-4091911:-1:exon
so has part: feature:4091481-4091509:-1:exon

XP_032871762.1
type: Protein
SIO_000068: ncbiprotein

position:4143506:-1
position: 4143506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4143455-4143506:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4135932-4136043:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4123586-4123695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4119244-4119329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4116623-4116737:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4114293-4114420:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4109439-4109587:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4107160-4107310:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4105013-4105178:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4104124-4104197:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4096274-4096418:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4092668-4092816:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4091743-4091911:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4091481-4091509:-1:exon

LOC116968925
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4159844..4176556
location: region:4159844-4176556:1
so has part: feature:4159844-4176556:1:exon
subclass of: SO_0000010

116968925
type: Gene
SIO_000068: ncbigene

position:4159844:1
position: 4159844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4176556:1
position: 4176556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4159844-4176556:1:exon

LOC116968925
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968925
product: acidic leucine-rich nuclear phosphoprotein 32 family member E-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033015915.1
SIO_010081: LOC116968925
subclass of: SO_0000673
so part of: LOC116968925
location: join(4159844..4160140,4169126..4169275,4170423..4170545,4172069..4172225,4173872..4174038,4174780..4174840,4176243..4176556)
location: region:4159844-4176556:1
so has part: feature:4159844-4160140:1:exon
so has part: feature:4169126-4169275:1:exon
so has part: feature:4170423-4170545:1:exon
so has part: feature:4172069-4172225:1:exon
so has part: feature:4173872-4174038:1:exon
so has part: feature:4174780-4174840:1:exon
so has part: feature:4176243-4176556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4159844-4160140:1:exon

position:4160140:1
position: 4160140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4169126-4169275:1:exon

position:4169126:1
position: 4169126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4169275:1
position: 4169275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4170423-4170545:1:exon

position:4170423:1
position: 4170423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4170545:1
position: 4170545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4172069-4172225:1:exon

position:4172069:1
position: 4172069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4172225:1
position: 4172225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4173872-4174038:1:exon

position:4173872:1
position: 4173872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4174038:1
position: 4174038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4174780-4174840:1:exon

position:4174780:1
position: 4174780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4174840:1
position: 4174840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4176243-4176556:1:exon

position:4176243:1
position: 4176243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic leucine-rich nuclear phosphoprotein 32 family member E-like
translation: MDMKKRINLELRNRSPGEVAELVIDNCRSSEGEIDGFSDGFKELEYLSMINVGLKSLSKLPNLHKLLKLELSDNAISGGLEMLTEKCPNLVYLNLSSNKIKEYSTVDPLKNLTHLKSLDLYNCDISNPNDYRESIFKLLPHITYLDGFDRDDQEAPESDDEDEDEEDEEEAAAAGGYYDEDDDDEEDEDEEDEEEDEDEKEEVEEVGLSYLLKEEIQDDEDDDDYVHEGEEGEAGEKDAAAQGQKRKREADDEGEDDE
SIO_010081: LOC116968925
subclass of: SO_0000673
so part of: LOC116968925
location: join(4160087..4160140,4169126..4169275,4170423..4170545,4172069..4172225,4173872..4174038,4174780..4174840,4176243..4176307)
location: region:4160087-4176307:1
so has part: feature:4160087-4160140:1:exon
so has part: feature:4169126-4169275:1:exon
so has part: feature:4170423-4170545:1:exon
so has part: feature:4172069-4172225:1:exon
so has part: feature:4173872-4174038:1:exon
so has part: feature:4174780-4174840:1:exon
so has part: feature:4176243-4176307:1:exon

XP_032871806.1
type: Protein
SIO_000068: ncbiprotein

position:4160087:1
position: 4160087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4176307:1
position: 4176307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4160087-4160140:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4169126-4169275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4170423-4170545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4172069-4172225:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4173872-4174038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4174780-4174840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4176243-4176307:1:exon

LOC116968881
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4224283..4237827
location: region:4224283-4237827:1
so has part: feature:4224283-4237827:1:exon
subclass of: SO_0000010

116968881
type: Gene
SIO_000068: ncbigene

position:4224283:1
position: 4224283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4237827:1
position: 4237827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4224283-4237827:1:exon

LOC116968881
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968881
product: mothers against decapentaplegic homolog 6-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033015858.1
SIO_010081: LOC116968881
subclass of: SO_0000673
so part of: LOC116968881
location: join(4224283..4224443,4225525..4226020,4231024..4231083,4233885..4233959,4237166..4237827)
location: region:4224283-4237827:1
so has part: feature:4224283-4224443:1:exon
so has part: feature:4225525-4226020:1:exon
so has part: feature:4231024-4231083:1:exon
so has part: feature:4233885-4233959:1:exon
so has part: feature:4237166-4237827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4224283-4224443:1:exon

position:4224443:1
position: 4224443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4225525-4226020:1:exon

position:4225525:1
position: 4225525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4226020:1
position: 4226020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4231024-4231083:1:exon

position:4231024:1
position: 4231024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4231083:1
position: 4231083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4233885-4233959:1:exon

position:4233885:1
position: 4233885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4233959:1
position: 4233959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4237166-4237827:1:exon

position:4237166:1
position: 4237166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968881
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968881
product: mothers against decapentaplegic homolog 6-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033015860.1
SIO_010081: LOC116968881
subclass of: SO_0000673
so part of: LOC116968881
location: join(4224283..4224443,4225525..4226020,4233885..4233959,4237166..4237827)
location: region:4224283-4237827:1
so has part: feature:4224283-4224443:1:exon
so has part: feature:4225525-4226020:1:exon
so has part: feature:4233885-4233959:1:exon
so has part: feature:4237166-4237827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4224283-4224443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4225525-4226020:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4233885-4233959:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4237166-4237827:1:exon

LOC116968881
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 6-like isoform X1
translation: MFPSRRSCAVRRLWRGRCQNGGLQGGLKPLTHSLFKRLREDQLEMLARAVEAGGAEDRVGCVSLVRSGVNHWPQVLTCKLFRWPDLRCPHQLKRLSICDCSRRSVEDSGLVCCNPYHFSRLCDPESPPPPYSKLSPSKNQNNIDDFLEDNFAYDQRAIEPSNNTSDLWPDFGLAPHLSREAHWCSVAYWEHRTRVGRLYAVHEPSVGVFCDLPRGNGFCLGQLHVADRHEMVRRTRGKIGRGILLSREWDGVWAYNRSEHPVFVNSPTLGPPNSRRLSVHKVQPGYSVKIFDYDKARALQRTAILDFPDGPYDPNSIRISFAKGWGPCYSRQFITSCPCWLEILLNHS
SIO_010081: LOC116968881
subclass of: SO_0000673
so part of: LOC116968881
location: join(4225648..4226020,4231024..4231083,4233885..4233959,4237166..4237704)
location: region:4225648-4237704:1
so has part: feature:4225648-4226020:1:exon
so has part: feature:4231024-4231083:1:exon
so has part: feature:4233885-4233959:1:exon
so has part: feature:4237166-4237704:1:exon

XP_032871749.1
type: Protein
SIO_000068: ncbiprotein

position:4225648:1
position: 4225648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4237704:1
position: 4237704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4225648-4226020:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4231024-4231083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4233885-4233959:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4237166-4237704:1:exon

LOC116968881
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 6-like isoform X2
translation: MFPSRRSCAVRRLWRGRCQNGGLQGGLKPLTHSLFKRLREDQLEMLARAVEAGGAEDRVGCVSLVRSGVNHWPQVLTCKLFRWPDLRCPHQLKRLSICDCSRRSVEDSGLVCCNPYHFSRLCDPDFLEDNFAYDQRAIEPSNNTSDLWPDFGLAPHLSREAHWCSVAYWEHRTRVGRLYAVHEPSVGVFCDLPRGNGFCLGQLHVADRHEMVRRTRGKIGRGILLSREWDGVWAYNRSEHPVFVNSPTLGPPNSRRLSVHKVQPGYSVKIFDYDKARALQRTAILDFPDGPYDPNSIRISFAKGWGPCYSRQFITSCPCWLEILLNHS
SIO_010081: LOC116968881
subclass of: SO_0000673
so part of: LOC116968881
location: join(4225648..4226020,4233885..4233959,4237166..4237704)
location: region:4225648-4237704:1
so has part: feature:4225648-4226020:1:exon
so has part: feature:4233885-4233959:1:exon
so has part: feature:4237166-4237704:1:exon

XP_032871751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4225648-4226020:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4233885-4233959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4237166-4237704:1:exon

LOC116968876
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4660366..4725260)
location: region:4660366-4725260:-1
so has part: feature:4660366-4725260:-1:exon
subclass of: SO_0000010

116968876
type: Gene
SIO_000068: ncbigene

position:4660366:-1
position: 4660366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4725260:-1
position: 4725260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4660366-4725260:-1:exon

LOC116968876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968876
product: cingulin-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033015852.1
SIO_010081: LOC116968876
subclass of: SO_0000673
so part of: LOC116968876
location: complement(join(4660366..4660622,4663520..4663672,4665810..4665914,4669180..4669386,4671084..4671296,4673817..4673958,4676433..4676581,4679430..4679642,4680994..4681132,4682557..4682708,4690211..4690312,4692062..4692131,4694297..4694394,4697051..4698450,4706682..4706687,4725116..4725260))
location: region:4660366-4725260:-1
so has part: feature:4725116-4725260:-1:exon
so has part: feature:4706682-4706687:-1:exon
so has part: feature:4697051-4698450:-1:exon
so has part: feature:4694297-4694394:-1:exon
so has part: feature:4692062-4692131:-1:exon
so has part: feature:4690211-4690312:-1:exon
so has part: feature:4682557-4682708:-1:exon
so has part: feature:4680994-4681132:-1:exon
so has part: feature:4679430-4679642:-1:exon
so has part: feature:4676433-4676581:-1:exon
so has part: feature:4673817-4673958:-1:exon
so has part: feature:4671084-4671296:-1:exon
so has part: feature:4669180-4669386:-1:exon
so has part: feature:4665810-4665914:-1:exon
so has part: feature:4663520-4663672:-1:exon
so has part: feature:4660366-4660622:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4725116-4725260:-1:exon

position:4725116:-1
position: 4725116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4706682-4706687:-1:exon

position:4706682:-1
position: 4706682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4706687:-1
position: 4706687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4697051-4698450:-1:exon

position:4697051:-1
position: 4697051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4698450:-1
position: 4698450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4694297-4694394:-1:exon

position:4694297:-1
position: 4694297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4694394:-1
position: 4694394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4692062-4692131:-1:exon

position:4692062:-1
position: 4692062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4692131:-1
position: 4692131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4690211-4690312:-1:exon

position:4690211:-1
position: 4690211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4690312:-1
position: 4690312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4682557-4682708:-1:exon

position:4682557:-1
position: 4682557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4682708:-1
position: 4682708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4680994-4681132:-1:exon

position:4680994:-1
position: 4680994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4681132:-1
position: 4681132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4679430-4679642:-1:exon

position:4679430:-1
position: 4679430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4679642:-1
position: 4679642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4676433-4676581:-1:exon

position:4676433:-1
position: 4676433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4676581:-1
position: 4676581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4673817-4673958:-1:exon

position:4673817:-1
position: 4673817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4673958:-1
position: 4673958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4671084-4671296:-1:exon

position:4671084:-1
position: 4671084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4671296:-1
position: 4671296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4669180-4669386:-1:exon

position:4669180:-1
position: 4669180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4669386:-1
position: 4669386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4665810-4665914:-1:exon

position:4665810:-1
position: 4665810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4665914:-1
position: 4665914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4663520-4663672:-1:exon

position:4663520:-1
position: 4663520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4663672:-1
position: 4663672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4660366-4660622:-1:exon

position:4660622:-1
position: 4660622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968876
product: cingulin-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033015851.1
SIO_010081: LOC116968876
subclass of: SO_0000673
so part of: LOC116968876
location: complement(join(4660366..4660622,4663520..4663672,4665810..4665914,4669180..4669386,4671084..4671296,4673817..4673958,4676433..4676581,4679430..4679642,4680994..4681132,4682557..4682708,4690211..4690312,4692062..4692131,4694297..4694394,4697051..4698429,4724066..4724069,4725116..4725260))
location: region:4660366-4725260:-1
so has part: feature:4725116-4725260:-1:exon
so has part: feature:4724066-4724069:-1:exon
so has part: feature:4697051-4698429:-1:exon
so has part: feature:4694297-4694394:-1:exon
so has part: feature:4692062-4692131:-1:exon
so has part: feature:4690211-4690312:-1:exon
so has part: feature:4682557-4682708:-1:exon
so has part: feature:4680994-4681132:-1:exon
so has part: feature:4679430-4679642:-1:exon
so has part: feature:4676433-4676581:-1:exon
so has part: feature:4673817-4673958:-1:exon
so has part: feature:4671084-4671296:-1:exon
so has part: feature:4669180-4669386:-1:exon
so has part: feature:4665810-4665914:-1:exon
so has part: feature:4663520-4663672:-1:exon
so has part: feature:4660366-4660622:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4725116-4725260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4724066-4724069:-1:exon

position:4724066:-1
position: 4724066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4724069:-1
position: 4724069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4697051-4698429:-1:exon

position:4698429:-1
position: 4698429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4694297-4694394:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4692062-4692131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4690211-4690312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4682557-4682708:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4680994-4681132:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4679430-4679642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4676433-4676581:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4673817-4673958:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4671084-4671296:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4669180-4669386:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4665810-4665914:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4663520-4663672:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4660366-4660622:-1:exon

LOC116968876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cingulin-like
translation: MDGGHVDQNAADKQAPVDYGVQIRFIDNLQGTHKVKKPKKNSAKSGTYGVVVRVQGISGQPFVVLNNSDGAPTAPGASGRADGSIKDTVREGNGDIVAGAQTRRAGARATEFEMPENPYGEPPAIPPRPHADSQFTSSDEETGSKRYTKLYDSNVYAPNNKSLLPYASDDDRSSLPRRKPGHQEDQLRKFNSYGSLLISDDVEFSREAGPSYQYLPGERPGFRAPSPAVSANGERLVNNLNERSRGSLDHKHPEKPWPNAGYNSTNLLQPAARASSVTDISLKPGEASEIDTKPLSSVDSLISKFDGSGGQQRGRTARHNRISPEERRRSRSLDNRKPQLDARREVEANHGYETSDSQKPYRSSDIMDVGRDFQSARILETKPVVATKESLSPIQFTSQSYGSDKGYTTGFRNKDQGLLPAFNASSLPRKWNQNQMEIEPIVEKDHKAVVFAEQNIELKCTPDLLRDQKAHSPASEDLTKQLIFGLLKEGSVESDNFLKKKANLVFDKLQDTKYTELSPDIGRLAAQKNDLEKKVTGLQQKLEEQLTNRQRVGSAAEDANTMVLQDMRLQLEESVEERTQLHSLYQKNRKELQHHIEDSMSLKMEKDTLEAEMRDLQEEMLILQKELRSVRNSAEDDEDQEVLQELTRTKEELDMVATAKKTTEDILRQRERELTALKGVLKEEVSSHDKAMEDLTAQYQKDMEQLRKNIDEVSRNQQNIESEKQKVNSTVRNLQRQLQESTEESGHWKEMFQKNREELRNSKQELLQIKMEKEEYDEELRDMRDRYSALQGEVDHVKQTSADMAGMEALKKDLAKTKKDLQDLTAVHELQKALMQRKEKEWSSQKETLTEKTADHGKVLEELKKSHHKEMETLRKSCDLIAVEKQSLETAKGATEQARKAADSTLKQLRLDNEDLKRKVSQMDFQLGECRDMLEEFQGTESRLKDKIARLEMERKQMEESLGEATDQEQEVAVAKRVLENRLEETQRNLNRVTQDHQELNVRLQDEMRQKDQLKKAKTELEEQKRVLDKTAEKLQKEVETIAEQSGSSVVSLQSQLEDHRDKSRRELLEHQRQGKEKTLELEKANMTVKRLQEEVQATSS
SIO_010081: LOC116968876
subclass of: SO_0000673
so part of: LOC116968876
location: complement(join(4660431..4660622,4663520..4663672,4665810..4665914,4669180..4669386,4671084..4671296,4673817..4673958,4676433..4676581,4679430..4679642,4680994..4681132,4682557..4682708,4690211..4690312,4692062..4692131,4694297..4694394,4697051..4698421))
location: region:4660431-4698421:-1
so has part: feature:4697051-4698421:-1:exon
so has part: feature:4694297-4694394:-1:exon
so has part: feature:4692062-4692131:-1:exon
so has part: feature:4690211-4690312:-1:exon
so has part: feature:4682557-4682708:-1:exon
so has part: feature:4680994-4681132:-1:exon
so has part: feature:4679430-4679642:-1:exon
so has part: feature:4676433-4676581:-1:exon
so has part: feature:4673817-4673958:-1:exon
so has part: feature:4671084-4671296:-1:exon
so has part: feature:4669180-4669386:-1:exon
so has part: feature:4665810-4665914:-1:exon
so has part: feature:4663520-4663672:-1:exon
so has part: feature:4660431-4660622:-1:exon

XP_032871742.1
type: Protein
SIO_000068: ncbiprotein

position:4660431:-1
position: 4660431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4698421:-1
position: 4698421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4697051-4698421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4694297-4694394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4692062-4692131:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4690211-4690312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4682557-4682708:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4680994-4681132:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4679430-4679642:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4676433-4676581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4673817-4673958:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4671084-4671296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4669180-4669386:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4665810-4665914:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4663520-4663672:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4660431-4660622:-1:exon

LOC116968876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cingulin-like
translation: MDGGHVDQNAADKQAPVDYGVQIRFIDNLQGTHKVKKPKKNSAKSGTYGVVVRVQGISGQPFVVLNNSDGAPTAPGASGRADGSIKDTVREGNGDIVAGAQTRRAGARATEFEMPENPYGEPPAIPPRPHADSQFTSSDEETGSKRYTKLYDSNVYAPNNKSLLPYASDDDRSSLPRRKPGHQEDQLRKFNSYGSLLISDDVEFSREAGPSYQYLPGERPGFRAPSPAVSANGERLVNNLNERSRGSLDHKHPEKPWPNAGYNSTNLLQPAARASSVTDISLKPGEASEIDTKPLSSVDSLISKFDGSGGQQRGRTARHNRISPEERRRSRSLDNRKPQLDARREVEANHGYETSDSQKPYRSSDIMDVGRDFQSARILETKPVVATKESLSPIQFTSQSYGSDKGYTTGFRNKDQGLLPAFNASSLPRKWNQNQMEIEPIVEKDHKAVVFAEQNIELKCTPDLLRDQKAHSPASEDLTKQLIFGLLKEGSVESDNFLKKKANLVFDKLQDTKYTELSPDIGRLAAQKNDLEKKVTGLQQKLEEQLTNRQRVGSAAEDANTMVLQDMRLQLEESVEERTQLHSLYQKNRKELQHHIEDSMSLKMEKDTLEAEMRDLQEEMLILQKELRSVRNSAEDDEDQEVLQELTRTKEELDMVATAKKTTEDILRQRERELTALKGVLKEEVSSHDKAMEDLTAQYQKDMEQLRKNIDEVSRNQQNIESEKQKVNSTVRNLQRQLQESTEESGHWKEMFQKNREELRNSKQELLQIKMEKEEYDEELRDMRDRYSALQGEVDHVKQTSADMAGMEALKKDLAKTKKDLQDLTAVHELQKALMQRKEKEWSSQKETLTEKTADHGKVLEELKKSHHKEMETLRKSCDLIAVEKQSLETAKGATEQARKAADSTLKQLRLDNEDLKRKVSQMDFQLGECRDMLEEFQGTESRLKDKIARLEMERKQMEESLGEATDQEQEVAVAKRVLENRLEETQRNLNRVTQDHQELNVRLQDEMRQKDQLKKAKTELEEQKRVLDKTAEKLQKEVETIAEQSGSSVVSLQSQLEDHRDKSRRELLEHQRQGKEKTLELEKANMTVKRLQEEVQATSS
SIO_010081: LOC116968876
subclass of: SO_0000673
so part of: LOC116968876
location: complement(join(4660431..4660622,4663520..4663672,4665810..4665914,4669180..4669386,4671084..4671296,4673817..4673958,4676433..4676581,4679430..4679642,4680994..4681132,4682557..4682708,4690211..4690312,4692062..4692131,4694297..4694394,4697051..4698421))
location: region:4660431-4698421:-1
so has part: feature:4697051-4698421:-1:exon
so has part: feature:4694297-4694394:-1:exon
so has part: feature:4692062-4692131:-1:exon
so has part: feature:4690211-4690312:-1:exon
so has part: feature:4682557-4682708:-1:exon
so has part: feature:4680994-4681132:-1:exon
so has part: feature:4679430-4679642:-1:exon
so has part: feature:4676433-4676581:-1:exon
so has part: feature:4673817-4673958:-1:exon
so has part: feature:4671084-4671296:-1:exon
so has part: feature:4669180-4669386:-1:exon
so has part: feature:4665810-4665914:-1:exon
so has part: feature:4663520-4663672:-1:exon
so has part: feature:4660431-4660622:-1:exon

XP_032871743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4697051-4698421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4694297-4694394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4692062-4692131:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4690211-4690312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4682557-4682708:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4680994-4681132:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4679430-4679642:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4676433-4676581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4673817-4673958:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4671084-4671296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4669180-4669386:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4665810-4665914:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4663520-4663672:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4660431-4660622:-1:exon

LOC116968909
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4730528..4734559
location: region:4730528-4734559:1
so has part: feature:4730528-4734559:1:exon
subclass of: SO_0000011

116968909
type: Gene
SIO_000068: ncbigene

position:4730528:1
position: 4730528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4734559:1
position: 4734559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4730528-4734559:1:exon

LOC116968909
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968909
product: uncharacterized LOC116968909
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_004410552.1
SIO_010081: LOC116968909
subclass of: SO_0000673
so part of: LOC116968909
location: join(4730528..4730538,4730843..4730848,4734264..4734559)
location: region:4730528-4734559:1
so has part: feature:4730528-4730538:1:exon
so has part: feature:4730843-4730848:1:exon
so has part: feature:4734264-4734559:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4730528-4730538:1:exon

position:4730538:1
position: 4730538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4730843-4730848:1:exon

position:4730843:1
position: 4730843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4730848:1
position: 4730848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4734264-4734559:1:exon

position:4734264:1
position: 4734264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968908
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4739940..4742972)
location: region:4739940-4742972:-1
so has part: feature:4739940-4742972:-1:exon
subclass of: SO_0000011

116968908
type: Gene
SIO_000068: ncbigene

position:4739940:-1
position: 4739940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4742972:-1
position: 4742972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4739940-4742972:-1:exon

LOC116968908
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968908
product: uncharacterized LOC116968908
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XR_004410551.1
SIO_010081: LOC116968908
subclass of: SO_0000673
so part of: LOC116968908
location: complement(join(4739940..4740329,4742808..4742972))
location: region:4739940-4742972:-1
so has part: feature:4742808-4742972:-1:exon
so has part: feature:4739940-4740329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4742808-4742972:-1:exon

position:4742808:-1
position: 4742808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4739940-4740329:-1:exon

position:4740329:-1
position: 4740329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968892
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<4942178..4945014)
location: region:4942178-4945014:-1
so has part: feature:4942178-4945014:-1:exon
subclass of: SO_0000010

116968892
type: Gene
SIO_000068: ncbigene

position:4942178:-1
position: 4942178
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:4945014:-1
position: 4945014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4942178-4945014:-1:exon

LOC116968892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968892
product: vacuolar protein sorting-associated protein 72 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033015872.1
SIO_010081: LOC116968892
subclass of: SO_0000673
so part of: LOC116968892
location: complement(join(<4942178..4942324,4944809..4945014))
location: region:4942178-4945014:-1
so has part: feature:4944809-4945014:-1:exon
so has part: feature:4942178-4942324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4944809-4945014:-1:exon

position:4944809:-1
position: 4944809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4942178-4942324:-1:exon

position:4942324:-1
position: 4942324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 72 homolog
translation: MSLSLAETRPPRNNAGTRMWRLLQAEEEDDFYKTTYGGFQEESGDEEYNTEQSESEDEVDSDFDIDEGEEPDSGPEDEEPRRKRRVITKV
SIO_010081: LOC116968892
subclass of: SO_0000673
so part of: LOC116968892
location: complement(join(<4942178..4942324,4944809..4944931))
location: region:4942178-4944931:-1
so has part: feature:4944809-4944931:-1:exon
so has part: feature:4942178-4942324:-1:exon

XP_032871763.1
type: Protein
SIO_000068: ncbiprotein

position:4944931:-1
position: 4944931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4944809-4944931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4942178-4942324:-1:exon

LOC116968930
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968930
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4974036..4975042)
location: region:4974036-4975042:-1
so has part: feature:4974036-4975042:-1:exon
subclass of: SO_0000011

116968930
type: Gene
SIO_000068: ncbigene

position:4974036:-1
position: 4974036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4975042:-1
position: 4975042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4974036-4975042:-1:exon

LOC116968930
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968930
product: uncharacterized LOC116968930
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004410555.1
SIO_010081: LOC116968930
subclass of: SO_0000673
so part of: LOC116968930
location: complement(join(4974036..4974075,4974153..4974162,4974666..4975042))
location: region:4974036-4975042:-1
so has part: feature:4974666-4975042:-1:exon
so has part: feature:4974153-4974162:-1:exon
so has part: feature:4974036-4974075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4974666-4975042:-1:exon

position:4974666:-1
position: 4974666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4974153-4974162:-1:exon

position:4974153:-1
position: 4974153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4974162:-1
position: 4974162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4974036-4974075:-1:exon

position:4974075:-1
position: 4974075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968929
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4980271..4996816)
location: region:4980271-4996816:-1
so has part: feature:4980271-4996816:-1:exon
subclass of: SO_0000010

116968929
type: Gene
SIO_000068: ncbigene

position:4980271:-1
position: 4980271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4996816:-1
position: 4996816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4980271-4996816:-1:exon

LOC116968929
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968929
product: induced myeloid leukemia cell differentiation protein Mcl-1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033015924.1
SIO_010081: LOC116968929
subclass of: SO_0000673
so part of: LOC116968929
location: complement(join(4980271..4982484,4986284..4986531,4996354..4996816))
location: region:4980271-4996816:-1
so has part: feature:4996354-4996816:-1:exon
so has part: feature:4986284-4986531:-1:exon
so has part: feature:4980271-4982484:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4996354-4996816:-1:exon

position:4996354:-1
position: 4996354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4986284-4986531:-1:exon

position:4986284:-1
position: 4986284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4986531:-1
position: 4986531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4980271-4982484:-1:exon

position:4982484:-1
position: 4982484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968929
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: induced myeloid leukemia cell differentiation protein Mcl-1 homolog
translation: MDMSLMALNRSSTSTMLQLQNQLFSMGTAQGGGAAASSTSSTSSWAVRDNSLPQTPDETEMEEAPSFPDDLYRLTLSLVEGYIRYYSGGAGEVTGRGWLAWAPHKDGDERRAVETMQRVGDRLIEKHYTAFNGMINRLNNSNGCNLASISGVAAEVFSDGEVNWGRVVSLVAFGAVLATHLKKQRSEDCVEEVATQITQYLTKETREWLETHGGWDGFTKFFQENNSEECTKKALMWIAGVGLAGASIMHLLR
SIO_010081: LOC116968929
subclass of: SO_0000673
so part of: LOC116968929
location: complement(join(4982368..4982484,4986284..4986531,4996354..4996750))
location: region:4982368-4996750:-1
so has part: feature:4996354-4996750:-1:exon
so has part: feature:4986284-4986531:-1:exon
so has part: feature:4982368-4982484:-1:exon

XP_032871815.1
type: Protein
SIO_000068: ncbiprotein

position:4982368:-1
position: 4982368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4996750:-1
position: 4996750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4996354-4996750:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4986284-4986531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4982368-4982484:-1:exon

ensa
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ensa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5015566..5023179)
location: region:5015566-5023179:-1
so has part: feature:5015566-5023179:-1:exon
subclass of: SO_0000010

116968905
type: Gene
SIO_000068: ncbigene

position:5015566:-1
position: 5015566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5023179:-1
position: 5023179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5015566-5023179:-1:exon

ensa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ensa
product: endosulfine alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015889.1
SIO_010081: ensa
subclass of: SO_0000673
so part of: ensa
location: complement(join(5015566..5015937,5016152..5016334,5017772..5017897,5022929..5023179))
location: region:5015566-5023179:-1
so has part: feature:5022929-5023179:-1:exon
so has part: feature:5017772-5017897:-1:exon
so has part: feature:5016152-5016334:-1:exon
so has part: feature:5015566-5015937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5022929-5023179:-1:exon

position:5022929:-1
position: 5022929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5017772-5017897:-1:exon

position:5017772:-1
position: 5017772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5017897:-1
position: 5017897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5016152-5016334:-1:exon

position:5016152:-1
position: 5016152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5016334:-1
position: 5016334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5015566-5015937:-1:exon

position:5015937:-1
position: 5015937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ensa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ensa
product: endosulfine alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015888.1
SIO_010081: ensa
subclass of: SO_0000673
so part of: ensa
location: complement(join(5015572..5015937,5016152..5016337,5017772..5017897,5022929..5023177))
location: region:5015572-5023177:-1
so has part: feature:5022929-5023177:-1:exon
so has part: feature:5017772-5017897:-1:exon
so has part: feature:5016152-5016337:-1:exon
so has part: feature:5015572-5015937:-1:exon

position:5015572:-1
position: 5015572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5023177:-1
position: 5023177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5022929-5023177:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5017772-5017897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5016152-5016337:-1:exon

position:5016337:-1
position: 5016337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5015572-5015937:-1:exon

ensa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ensa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-endosulfine isoform X2
translation: MSDNRQLEGTGDEKQDTQEKGAMSPEKAEEVKLKAKYPVLGLRPGGSEFLMKRLQKGKYFDSGDYNMAKAKMKNKQPPSNGADKNLVTGDHIPTPEDLPQRKSSLVASKLAG
SIO_010081: ensa
subclass of: SO_0000673
so part of: ensa
location: complement(join(5016167..5016334,5017772..5017897,5022929..5022973))
location: region:5016167-5022973:-1
so has part: feature:5022929-5022973:-1:exon
so has part: feature:5017772-5017897:-1:exon
so has part: feature:5016167-5016334:-1:exon

XP_032871780.1
type: Protein
SIO_000068: ncbiprotein

position:5016167:-1
position: 5016167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5022973:-1
position: 5022973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5022929-5022973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5017772-5017897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5016167-5016334:-1:exon

ensa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ensa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-endosulfine isoform X1
translation: MSDNRQLEGTGDEKQDTQEKGAMSPEKAEEVKLKAKYPVLGLRPGGSEFLMKRLQKGQKYFDSGDYNMAKAKMKNKQPPSNGADKNLVTGDHIPTPEDLPQRKSSLVASKLAG
SIO_010081: ensa
subclass of: SO_0000673
so part of: ensa
location: complement(join(5016167..5016337,5017772..5017897,5022929..5022973))
location: region:5016167-5022973:-1
so has part: feature:5022929-5022973:-1:exon
so has part: feature:5017772-5017897:-1:exon
so has part: feature:5016167-5016337:-1:exon

XP_032871779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5022929-5022973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5017772-5017897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5016167-5016337:-1:exon

LOC116968902
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5035667..5041902)
location: region:5035667-5041902:-1
so has part: feature:5035667-5041902:-1:exon
subclass of: SO_0000010

116968902
type: Gene
SIO_000068: ncbigene

position:5035667:-1
position: 5035667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5041902:-1
position: 5041902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5035667-5041902:-1:exon

LOC116968902
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968902
product: hepatocyte nuclear factor 6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033015885.1
SIO_010081: LOC116968902
subclass of: SO_0000673
so part of: LOC116968902
location: complement(join(5035667..5035946,5040998..5041902))
location: region:5035667-5041902:-1
so has part: feature:5040998-5041902:-1:exon
so has part: feature:5035667-5035946:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5040998-5041902:-1:exon

position:5040998:-1
position: 5040998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5035667-5035946:-1:exon

position:5035946:-1
position: 5035946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968902
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte nuclear factor 6-like
translation: MDQQLGLEPELEPARLQHLTHSRDGQCPLGVSQPVSGVGSAPGSRDYRPDLTLPGPSAGHYSALVHPGPAADRYRDLLLPNNLTAGFACARENGGCADFYGLHLKGLGLGQPMVTQGPGPYGLCPGQLGVEKLSHIFSSGPTSMFSPEDHSLMSHPPAPTLFAQDHQDVDLLAHRSYAGASPPGTSKVQAFGQSEDINTKEVARKVMGELKRYNIPQAVFARRVLCRSQGTLSDLLRNPKPWTKLKSGRETFRRMWSWLQEPEYQRMSYLRLEASRRKEQEGAGVEHHRSPKRHRLVFTDVQRRTLLAIYKENPRPNRDLQLTIALQLGLELSTVANFFMNSRRRSLDKWSEEGTQVTIDNRQ
SIO_010081: LOC116968902
subclass of: SO_0000673
so part of: LOC116968902
location: complement(join(5035675..5035946,5040998..5041817))
location: region:5035675-5041817:-1
so has part: feature:5040998-5041817:-1:exon
so has part: feature:5035675-5035946:-1:exon

XP_032871776.1
type: Protein
SIO_000068: ncbiprotein

position:5035675:-1
position: 5035675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5041817:-1
position: 5041817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5040998-5041817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5035675-5035946:-1:exon

LOC116968904
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5045998..5076164)
location: region:5045998-5076164:-1
so has part: feature:5045998-5076164:-1:exon
subclass of: SO_0000010

116968904
type: Gene
SIO_000068: ncbigene

position:5045998:-1
position: 5045998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5076164:-1
position: 5076164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5045998-5076164:-1:exon

LOC116968904
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968904
product: Golgi phosphoprotein 3-like B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 19 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015886.1
SIO_010081: LOC116968904
subclass of: SO_0000673
so part of: LOC116968904
location: complement(join(5045998..5046013,5050452..5051736,5055387..5055501,5057948..5058079,5075859..5076164))
location: region:5045998-5076164:-1
so has part: feature:5075859-5076164:-1:exon
so has part: feature:5057948-5058079:-1:exon
so has part: feature:5055387-5055501:-1:exon
so has part: feature:5050452-5051736:-1:exon
so has part: feature:5045998-5046013:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5075859-5076164:-1:exon

position:5075859:-1
position: 5075859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5057948-5058079:-1:exon

position:5057948:-1
position: 5057948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5058079:-1
position: 5058079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5055387-5055501:-1:exon

position:5055387:-1
position: 5055387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5055501:-1
position: 5055501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5050452-5051736:-1:exon

position:5050452:-1
position: 5050452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5051736:-1
position: 5051736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5045998-5046013:-1:exon

position:5046013:-1
position: 5046013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968904
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968904
product: Golgi phosphoprotein 3-like B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 19 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015887.1
SIO_010081: LOC116968904
subclass of: SO_0000673
so part of: LOC116968904
location: complement(join(5049525..5049537,5050452..5051736,5055387..5055501,5057948..5058079,5075859..5076164))
location: region:5049525-5076164:-1
so has part: feature:5075859-5076164:-1:exon
so has part: feature:5057948-5058079:-1:exon
so has part: feature:5055387-5055501:-1:exon
so has part: feature:5050452-5051736:-1:exon
so has part: feature:5049525-5049537:-1:exon

position:5049525:-1
position: 5049525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5075859-5076164:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5057948-5058079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5055387-5055501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5050452-5051736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5049525-5049537:-1:exon

position:5049537:-1
position: 5049537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968904
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi phosphoprotein 3-like B
translation: MTSTLTHRPRRTEATAGRDGERWRDDADDEDGQRRDGEEEEAGDCKELRLTLMEEVLLLGIKDREGYTSFWNDCISAGLRGCILVELSLRGRIQLEPATMRRKCLLNRKVLFKSDAPTGDVLLDEALKHIKATEPAETVQSWIELLTGETWNPLKLNYQIRNVRERLAKSLVEKGVLTTEKQNFLLFDMTTHPVTNDTLKQRLIKKLQAAFLDKWTKEPQRMDKRLLALVLLAHSSDVLENAFVPLLDEQYELATTRSRELLELNPDHESTKPNANEVIWAVMAAFTK
SIO_010081: LOC116968904
subclass of: SO_0000673
so part of: LOC116968904
location: complement(join(5051312..5051736,5055387..5055501,5057948..5058079,5075859..5076053))
location: region:5051312-5076053:-1
so has part: feature:5075859-5076053:-1:exon
so has part: feature:5057948-5058079:-1:exon
so has part: feature:5055387-5055501:-1:exon
so has part: feature:5051312-5051736:-1:exon

XP_032871777.1
type: Protein
SIO_000068: ncbiprotein

position:5051312:-1
position: 5051312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5076053:-1
position: 5076053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5075859-5076053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5057948-5058079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5055387-5055501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5051312-5051736:-1:exon

LOC116968904
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi phosphoprotein 3-like B
translation: MTSTLTHRPRRTEATAGRDGERWRDDADDEDGQRRDGEEEEAGDCKELRLTLMEEVLLLGIKDREGYTSFWNDCISAGLRGCILVELSLRGRIQLEPATMRRKCLLNRKVLFKSDAPTGDVLLDEALKHIKATEPAETVQSWIELLTGETWNPLKLNYQIRNVRERLAKSLVEKGVLTTEKQNFLLFDMTTHPVTNDTLKQRLIKKLQAAFLDKWTKEPQRMDKRLLALVLLAHSSDVLENAFVPLLDEQYELATTRSRELLELNPDHESTKPNANEVIWAVMAAFTK
SIO_010081: LOC116968904
subclass of: SO_0000673
so part of: LOC116968904
location: complement(join(5051312..5051736,5055387..5055501,5057948..5058079,5075859..5076053))
location: region:5051312-5076053:-1
so has part: feature:5075859-5076053:-1:exon
so has part: feature:5057948-5058079:-1:exon
so has part: feature:5055387-5055501:-1:exon
so has part: feature:5051312-5051736:-1:exon

XP_032871778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5075859-5076053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5057948-5058079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5055387-5055501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5051312-5051736:-1:exon

LOC116968906
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968906
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5076400..5077169)
location: region:5076400-5077169:-1
so has part: feature:5076400-5077169:-1:exon
subclass of: SO_0000011

116968906
type: Gene
SIO_000068: ncbigene

position:5076400:-1
position: 5076400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5077169:-1
position: 5077169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5076400-5077169:-1:exon

LOC116968906
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968906
product: uncharacterized LOC116968906
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004410550.1
SIO_010081: LOC116968906
subclass of: SO_0000673
so part of: LOC116968906
location: complement(join(5076400..5076560,5076664..5076933,5077012..5077169))
location: region:5076400-5077169:-1
so has part: feature:5077012-5077169:-1:exon
so has part: feature:5076664-5076933:-1:exon
so has part: feature:5076400-5076560:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5077012-5077169:-1:exon

position:5077012:-1
position: 5077012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5076664-5076933:-1:exon

position:5076664:-1
position: 5076664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5076933:-1
position: 5076933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5076400-5076560:-1:exon

position:5076560:-1
position: 5076560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hormad1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: hormad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5081237..5104494)
location: region:5081237-5104494:-1
so has part: feature:5081237-5104494:-1:exon
subclass of: SO_0000010

116968901
type: Gene
SIO_000068: ncbigene

position:5081237:-1
position: 5081237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5104494:-1
position: 5104494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5081237-5104494:-1:exon

hormad1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hormad1
product: HORMA domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015884.1
SIO_010081: hormad1
subclass of: SO_0000673
so part of: hormad1
location: complement(join(5081237..5081743,5082824..5082916,5084375..5084458,5086000..5086064,5087205..5087283,5087955..5088205,5089990..5090141,5091060..5091127,5093075..5093104,5093321..5093341,5095993..5096029,5100352..5100415,5102402..5102546,5104208..5104494))
location: region:5081237-5104494:-1
so has part: feature:5104208-5104494:-1:exon
so has part: feature:5102402-5102546:-1:exon
so has part: feature:5100352-5100415:-1:exon
so has part: feature:5095993-5096029:-1:exon
so has part: feature:5093321-5093341:-1:exon
so has part: feature:5093075-5093104:-1:exon
so has part: feature:5091060-5091127:-1:exon
so has part: feature:5089990-5090141:-1:exon
so has part: feature:5087955-5088205:-1:exon
so has part: feature:5087205-5087283:-1:exon
so has part: feature:5086000-5086064:-1:exon
so has part: feature:5084375-5084458:-1:exon
so has part: feature:5082824-5082916:-1:exon
so has part: feature:5081237-5081743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5104208-5104494:-1:exon

position:5104208:-1
position: 5104208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5102402-5102546:-1:exon

position:5102402:-1
position: 5102402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5102546:-1
position: 5102546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5100352-5100415:-1:exon

position:5100352:-1
position: 5100352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5100415:-1
position: 5100415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5095993-5096029:-1:exon

position:5095993:-1
position: 5095993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5096029:-1
position: 5096029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5093321-5093341:-1:exon

position:5093321:-1
position: 5093321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5093341:-1
position: 5093341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5093075-5093104:-1:exon

position:5093075:-1
position: 5093075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5093104:-1
position: 5093104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5091060-5091127:-1:exon

position:5091060:-1
position: 5091060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5091127:-1
position: 5091127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5089990-5090141:-1:exon

position:5089990:-1
position: 5089990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5090141:-1
position: 5090141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5087955-5088205:-1:exon

position:5087955:-1
position: 5087955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5088205:-1
position: 5088205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5087205-5087283:-1:exon

position:5087205:-1
position: 5087205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5087283:-1
position: 5087283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5086000-5086064:-1:exon

position:5086000:-1
position: 5086000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5086064:-1
position: 5086064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5084375-5084458:-1:exon

position:5084375:-1
position: 5084375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5084458:-1
position: 5084458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5082824-5082916:-1:exon

position:5082824:-1
position: 5082824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5082916:-1
position: 5082916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5081237-5081743:-1:exon

position:5081743:-1
position: 5081743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hormad1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hormad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HORMA domain-containing protein 1
translation: MAVVQTTKNAVSAAMFPSKVATEHQSLVLVKRLLAVAISCITYLRGIFPEHAYGTRYLEDLCVKILREDDSCPGSSQIVKWMMGCYDALQKKYLRMLILAIYTNQDVDCQTVTECYQFKFKYMKDGPSMDFTSNNGKVRSTVHCSDTKRTSILLIRKLYVLMQSLGPLPNDICLKMKLTYYDEVTPPEYQPPGFREGTSESMIFEGDPVFLRVGEVATPFHVLKLKVTTDSERMAQTDRSLEQETGSVDVPPGQRAGMDQSEQVEINDTLPAESPAASQTLAPENVNDDEQDGETRIPPEAGKNANPKSNSPLTQVENLVNKTSEMGPSGRRTRSGRRFDGSFASVEPLDNEQEENSKKKVVGKRPTGREQSKPVYQFEIPCSQDEVSMRKRKKFSEPKERFR
SIO_010081: hormad1
subclass of: SO_0000673
so part of: hormad1
location: complement(join(5081654..5081743,5082824..5082916,5084375..5084458,5086000..5086064,5087205..5087283,5087955..5088205,5089990..5090141,5091060..5091127,5093075..5093104,5093321..5093341,5095993..5096029,5100352..5100415,5102402..5102546,5104208..5104240))
location: region:5081654-5104240:-1
so has part: feature:5104208-5104240:-1:exon
so has part: feature:5102402-5102546:-1:exon
so has part: feature:5100352-5100415:-1:exon
so has part: feature:5095993-5096029:-1:exon
so has part: feature:5093321-5093341:-1:exon
so has part: feature:5093075-5093104:-1:exon
so has part: feature:5091060-5091127:-1:exon
so has part: feature:5089990-5090141:-1:exon
so has part: feature:5087955-5088205:-1:exon
so has part: feature:5087205-5087283:-1:exon
so has part: feature:5086000-5086064:-1:exon
so has part: feature:5084375-5084458:-1:exon
so has part: feature:5082824-5082916:-1:exon
so has part: feature:5081654-5081743:-1:exon

XP_032871775.1
type: Protein
SIO_000068: ncbiprotein

position:5081654:-1
position: 5081654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5104240:-1
position: 5104240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5104208-5104240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5102402-5102546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5100352-5100415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5095993-5096029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5093321-5093341:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5093075-5093104:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5091060-5091127:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5089990-5090141:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5087955-5088205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5087205-5087283:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5086000-5086064:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5084375-5084458:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5082824-5082916:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5081654-5081743:-1:exon

LOC116968900
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5113779..5180723)
location: region:5113779-5180723:-1
so has part: feature:5113779-5180723:-1:exon
subclass of: SO_0000010

116968900
type: Gene
SIO_000068: ncbigene

position:5113779:-1
position: 5113779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5180723:-1
position: 5180723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5113779-5180723:-1:exon

LOC116968900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968900
product: aryl hydrocarbon receptor nuclear translocator-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033015883.1
SIO_010081: LOC116968900
subclass of: SO_0000673
so part of: LOC116968900
location: complement(join(5113779..5114726,5117363..5117508,5120740..5120908,5122141..5122282,5123138..5123240,5123731..5123845,5124786..5124846,5127626..5127777,5131727..5131801,5135439..5135573,5140385..5140461,5142663..5142748,5145452..5145517,5149246..5149354,5150584..5150797,5153169..5153382,5155997..5156041,5157610..5157669,5160072..5160189,5180635..5180723))
location: region:5113779-5180723:-1
so has part: feature:5180635-5180723:-1:exon
so has part: feature:5160072-5160189:-1:exon
so has part: feature:5157610-5157669:-1:exon
so has part: feature:5155997-5156041:-1:exon
so has part: feature:5153169-5153382:-1:exon
so has part: feature:5150584-5150797:-1:exon
so has part: feature:5149246-5149354:-1:exon
so has part: feature:5145452-5145517:-1:exon
so has part: feature:5142663-5142748:-1:exon
so has part: feature:5140385-5140461:-1:exon
so has part: feature:5135439-5135573:-1:exon
so has part: feature:5131727-5131801:-1:exon
so has part: feature:5127626-5127777:-1:exon
so has part: feature:5124786-5124846:-1:exon
so has part: feature:5123731-5123845:-1:exon
so has part: feature:5123138-5123240:-1:exon
so has part: feature:5122141-5122282:-1:exon
so has part: feature:5120740-5120908:-1:exon
so has part: feature:5117363-5117508:-1:exon
so has part: feature:5113779-5114726:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5180635-5180723:-1:exon

position:5180635:-1
position: 5180635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5160072-5160189:-1:exon

position:5160072:-1
position: 5160072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5160189:-1
position: 5160189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5157610-5157669:-1:exon

position:5157610:-1
position: 5157610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5157669:-1
position: 5157669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5155997-5156041:-1:exon

position:5155997:-1
position: 5155997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5156041:-1
position: 5156041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5153169-5153382:-1:exon

position:5153169:-1
position: 5153169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5153382:-1
position: 5153382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5150584-5150797:-1:exon

position:5150584:-1
position: 5150584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5150797:-1
position: 5150797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5149246-5149354:-1:exon

position:5149246:-1
position: 5149246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5149354:-1
position: 5149354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5145452-5145517:-1:exon

position:5145452:-1
position: 5145452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5145517:-1
position: 5145517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5142663-5142748:-1:exon

position:5142663:-1
position: 5142663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5142748:-1
position: 5142748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5140385-5140461:-1:exon

position:5140385:-1
position: 5140385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5140461:-1
position: 5140461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5135439-5135573:-1:exon

position:5135439:-1
position: 5135439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5135573:-1
position: 5135573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5131727-5131801:-1:exon

position:5131727:-1
position: 5131727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5131801:-1
position: 5131801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5127626-5127777:-1:exon

position:5127626:-1
position: 5127626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5127777:-1
position: 5127777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5124786-5124846:-1:exon

position:5124786:-1
position: 5124786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5124846:-1
position: 5124846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5123731-5123845:-1:exon

position:5123731:-1
position: 5123731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5123845:-1
position: 5123845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5123138-5123240:-1:exon

position:5123138:-1
position: 5123138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5123240:-1
position: 5123240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5122141-5122282:-1:exon

position:5122141:-1
position: 5122141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5122282:-1
position: 5122282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5120740-5120908:-1:exon

position:5120740:-1
position: 5120740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5120908:-1
position: 5120908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5117363-5117508:-1:exon

position:5117363:-1
position: 5117363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5117508:-1
position: 5117508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5113779-5114726:-1:exon

position:5114726:-1
position: 5114726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968900
product: aryl hydrocarbon receptor nuclear translocator-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033015881.1
SIO_010081: LOC116968900
subclass of: SO_0000673
so part of: LOC116968900
location: complement(join(5113779..5114726,5117363..5117508,5120740..5120908,5122141..5122282,5123138..5123240,5123731..5123845,5124786..5124846,5127626..5127777,5131727..5131801,5135439..5135573,5140385..5140461,5142663..5142748,5145452..5145517,5149246..5149348,5150584..5150797,5153169..5153382,5155997..5156041,5157610..5157669,5160072..5160189,5163731..5163936))
location: region:5113779-5163936:-1
so has part: feature:5163731-5163936:-1:exon
so has part: feature:5160072-5160189:-1:exon
so has part: feature:5157610-5157669:-1:exon
so has part: feature:5155997-5156041:-1:exon
so has part: feature:5153169-5153382:-1:exon
so has part: feature:5150584-5150797:-1:exon
so has part: feature:5149246-5149348:-1:exon
so has part: feature:5145452-5145517:-1:exon
so has part: feature:5142663-5142748:-1:exon
so has part: feature:5140385-5140461:-1:exon
so has part: feature:5135439-5135573:-1:exon
so has part: feature:5131727-5131801:-1:exon
so has part: feature:5127626-5127777:-1:exon
so has part: feature:5124786-5124846:-1:exon
so has part: feature:5123731-5123845:-1:exon
so has part: feature:5123138-5123240:-1:exon
so has part: feature:5122141-5122282:-1:exon
so has part: feature:5120740-5120908:-1:exon
so has part: feature:5117363-5117508:-1:exon
so has part: feature:5113779-5114726:-1:exon

position:5163936:-1
position: 5163936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5163731-5163936:-1:exon

position:5163731:-1
position: 5163731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5160072-5160189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5157610-5157669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5155997-5156041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5153169-5153382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5150584-5150797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5149246-5149348:-1:exon

position:5149348:-1
position: 5149348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5145452-5145517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5142663-5142748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5140385-5140461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5135439-5135573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5131727-5131801:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5127626-5127777:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5124786-5124846:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5123731-5123845:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5123138-5123240:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5122141-5122282:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5120740-5120908:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5117363-5117508:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5113779-5114726:-1:exon

LOC116968900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968900
product: aryl hydrocarbon receptor nuclear translocator-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033015882.1
SIO_010081: LOC116968900
subclass of: SO_0000673
so part of: LOC116968900
location: complement(join(5113779..5114726,5117363..5117508,5120740..5120908,5122141..5122282,5123138..5123240,5123731..5123833,5124786..5124846,5127626..5127777,5131727..5131801,5135439..5135573,5140385..5140461,5142663..5142748,5145452..5145517,5149246..5149354,5150584..5150797,5153169..5153382,5155997..5156041,5157610..5157669,5160072..5160189,5163731..5163936))
location: region:5113779-5163936:-1
so has part: feature:5163731-5163936:-1:exon
so has part: feature:5160072-5160189:-1:exon
so has part: feature:5157610-5157669:-1:exon
so has part: feature:5155997-5156041:-1:exon
so has part: feature:5153169-5153382:-1:exon
so has part: feature:5150584-5150797:-1:exon
so has part: feature:5149246-5149354:-1:exon
so has part: feature:5145452-5145517:-1:exon
so has part: feature:5142663-5142748:-1:exon
so has part: feature:5140385-5140461:-1:exon
so has part: feature:5135439-5135573:-1:exon
so has part: feature:5131727-5131801:-1:exon
so has part: feature:5127626-5127777:-1:exon
so has part: feature:5124786-5124846:-1:exon
so has part: feature:5123731-5123833:-1:exon
so has part: feature:5123138-5123240:-1:exon
so has part: feature:5122141-5122282:-1:exon
so has part: feature:5120740-5120908:-1:exon
so has part: feature:5117363-5117508:-1:exon
so has part: feature:5113779-5114726:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5163731-5163936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5160072-5160189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5157610-5157669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5155997-5156041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5153169-5153382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5150584-5150797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5149246-5149354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5145452-5145517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5142663-5142748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5140385-5140461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5135439-5135573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5131727-5131801:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5127626-5127777:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5124786-5124846:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5123731-5123833:-1:exon

position:5123833:-1
position: 5123833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5123138-5123240:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5122141-5122282:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5120740-5120908:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5117363-5117508:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5113779-5114726:-1:exon

LOC116968900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968900
product: aryl hydrocarbon receptor nuclear translocator-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033015880.1
SIO_010081: LOC116968900
subclass of: SO_0000673
so part of: LOC116968900
location: complement(join(5113779..5114726,5117363..5117508,5120740..5120905,5122141..5122282,5123138..5123240,5123731..5123845,5124786..5124846,5127626..5127777,5131727..5131801,5135439..5135573,5140385..5140461,5142663..5142748,5145452..5145517,5149246..5149354,5150584..5150797,5153169..5153382,5155997..5156041,5157610..5157669,5160072..5160189,5163731..5163936))
location: region:5113779-5163936:-1
so has part: feature:5163731-5163936:-1:exon
so has part: feature:5160072-5160189:-1:exon
so has part: feature:5157610-5157669:-1:exon
so has part: feature:5155997-5156041:-1:exon
so has part: feature:5153169-5153382:-1:exon
so has part: feature:5150584-5150797:-1:exon
so has part: feature:5149246-5149354:-1:exon
so has part: feature:5145452-5145517:-1:exon
so has part: feature:5142663-5142748:-1:exon
so has part: feature:5140385-5140461:-1:exon
so has part: feature:5135439-5135573:-1:exon
so has part: feature:5131727-5131801:-1:exon
so has part: feature:5127626-5127777:-1:exon
so has part: feature:5124786-5124846:-1:exon
so has part: feature:5123731-5123845:-1:exon
so has part: feature:5123138-5123240:-1:exon
so has part: feature:5122141-5122282:-1:exon
so has part: feature:5120740-5120905:-1:exon
so has part: feature:5117363-5117508:-1:exon
so has part: feature:5113779-5114726:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5163731-5163936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5160072-5160189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5157610-5157669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5155997-5156041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5153169-5153382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5150584-5150797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5149246-5149354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5145452-5145517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5142663-5142748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5140385-5140461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5135439-5135573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5131727-5131801:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5127626-5127777:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5124786-5124846:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5123731-5123845:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5123138-5123240:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5122141-5122282:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5120740-5120905:-1:exon

position:5120905:-1
position: 5120905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5117363-5117508:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5113779-5114726:-1:exon

LOC116968900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968900
product: aryl hydrocarbon receptor nuclear translocator-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033015879.1
SIO_010081: LOC116968900
subclass of: SO_0000673
so part of: LOC116968900
location: complement(join(5113779..5114726,5117363..5117508,5120740..5120908,5122141..5122282,5123138..5123240,5123731..5123845,5124786..5124846,5127626..5127777,5131727..5131801,5135439..5135573,5140385..5140461,5142663..5142748,5145452..5145517,5149246..5149354,5150584..5150797,5153169..5153382,5155997..5156041,5157610..5157669,5160072..5160189,5163731..5163936))
location: region:5113779-5163936:-1
so has part: feature:5163731-5163936:-1:exon
so has part: feature:5160072-5160189:-1:exon
so has part: feature:5157610-5157669:-1:exon
so has part: feature:5155997-5156041:-1:exon
so has part: feature:5153169-5153382:-1:exon
so has part: feature:5150584-5150797:-1:exon
so has part: feature:5149246-5149354:-1:exon
so has part: feature:5145452-5145517:-1:exon
so has part: feature:5142663-5142748:-1:exon
so has part: feature:5140385-5140461:-1:exon
so has part: feature:5135439-5135573:-1:exon
so has part: feature:5131727-5131801:-1:exon
so has part: feature:5127626-5127777:-1:exon
so has part: feature:5124786-5124846:-1:exon
so has part: feature:5123731-5123845:-1:exon
so has part: feature:5123138-5123240:-1:exon
so has part: feature:5122141-5122282:-1:exon
so has part: feature:5120740-5120908:-1:exon
so has part: feature:5117363-5117508:-1:exon
so has part: feature:5113779-5114726:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5163731-5163936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5160072-5160189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5157610-5157669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5155997-5156041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5153169-5153382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5150584-5150797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5149246-5149354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5145452-5145517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5142663-5142748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5140385-5140461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5135439-5135573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5131727-5131801:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5127626-5127777:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5124786-5124846:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5123731-5123845:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5123138-5123240:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5122141-5122282:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5120740-5120908:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5117363-5117508:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5113779-5114726:-1:exon

LOC116968900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator-like isoform X3
translation: MAAAVNPVVEMASEIGGPLSVAGSAGSAAQTQDSGGIMSRAPKRHPGLDFDDDDDDDDGEGSSKFPRCEGDEGSNDKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSMDGTYKPSFLTDQELKHLILEAADGFLFVVACETGKIIYVSDSVMPVLNQPQSEWFGSSLYNQVHPEDVEKLREQLSTSENAMTGRILDLKTGTVKKEGQQTSMRMCMGSRRSFICRVRCGNAPVNPASMNRLSFLRNRCRNGLGPLKEGEPQFVVVHCTGFIKAWPPAGVTLPDDEPDGSQGNKFCLVTIGRLQVTSSPSCVDMKGISLPTEFLSRHNTNGIFTFVDHRCVGTVGYQPQELLGKDIVDFAHPEDKGLLRDSFQQVVTLKGQVLSVMFRFQTKSREWAVIRTSCFTFQNPYSDDIEYIVCTNTNVKHLQQTPALTGPEELTYEHPQVGVQAPATERTKPTSKTEPHYNREADARYADIYSGITTVDQNKAVPSSPAAGNQQIYQQGTSFPSARPAQNFSTGMAPSVNVVQQPSAAGQILAQISRQSSGGQVSGNAWSGSRPPFPAQQMAMQGVKTQSPPFGMGANHNFPANAASFSPLANPAVTPAAGGTAYPPLPNRTPAFAEAGQTGAQFQSRPAEGASVWPQWQGQHHGQTSAEPHAHQPQSQPEVYQEMLSIYEEQNATYNSDEFSELPMFPSFSE
SIO_010081: LOC116968900
subclass of: SO_0000673
so part of: LOC116968900
location: complement(join(5114637..5114726,5117363..5117508,5120740..5120908,5122141..5122282,5123138..5123240,5123731..5123845,5124786..5124846,5127626..5127777,5131727..5131801,5135439..5135573,5140385..5140461,5142663..5142748,5145452..5145517,5149246..5149348,5150584..5150797,5153169..5153382,5155997..5156041,5157610..5157669,5160072..5160189,5163731..5163752))
location: region:5114637-5163752:-1
so has part: feature:5163731-5163752:-1:exon
so has part: feature:5160072-5160189:-1:exon
so has part: feature:5157610-5157669:-1:exon
so has part: feature:5155997-5156041:-1:exon
so has part: feature:5153169-5153382:-1:exon
so has part: feature:5150584-5150797:-1:exon
so has part: feature:5149246-5149348:-1:exon
so has part: feature:5145452-5145517:-1:exon
so has part: feature:5142663-5142748:-1:exon
so has part: feature:5140385-5140461:-1:exon
so has part: feature:5135439-5135573:-1:exon
so has part: feature:5131727-5131801:-1:exon
so has part: feature:5127626-5127777:-1:exon
so has part: feature:5124786-5124846:-1:exon
so has part: feature:5123731-5123845:-1:exon
so has part: feature:5123138-5123240:-1:exon
so has part: feature:5122141-5122282:-1:exon
so has part: feature:5120740-5120908:-1:exon
so has part: feature:5117363-5117508:-1:exon
so has part: feature:5114637-5114726:-1:exon

XP_032871772.1
type: Protein
SIO_000068: ncbiprotein

position:5114637:-1
position: 5114637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5163752:-1
position: 5163752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5163731-5163752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5160072-5160189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5157610-5157669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5155997-5156041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5153169-5153382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5150584-5150797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5149246-5149348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5145452-5145517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5142663-5142748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5140385-5140461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5135439-5135573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5131727-5131801:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5127626-5127777:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5124786-5124846:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5123731-5123845:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5123138-5123240:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5122141-5122282:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5120740-5120908:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5117363-5117508:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5114637-5114726:-1:exon

LOC116968900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator 2-like isoform X4
translation: MAAAVNPVVEMASEIGGPLSVAGSAGSAAQTQDSGGIMSRAPKRHPGLDFDDDDDDDDGEGSSKFPRCEGDEGSNDKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSMDGTYKPSFLTDQELKHLILEAADGFLFVVACETGKIIYVSDSVMPVLNQPQSEWFGSSLYNQVHPEDVEKLREQLSTSENAMTGAGRILDLKTGTVKKEGQQTSMRMCMGSRRSFICRVRCGNAPVNPASMNRLSFLRNRCRNGLGPLKEGEPQFVVVHCTGFIKAWPPAGVTLPDDEPDGSQGNKFCLVTIGRLQVTSSPSCVDMKGISLPTEFLSRHNTNGIFTFVDHRCVGTVGYQPQELLGKDIVDFAHPEDKGLLRDSFQQVVTLKGQVLSVMFRFQTKSREWAVIRTSCFTFQNPYSDDIEYIVCTNTNVKHLQQTPALTGPEELTYEHPQAPATERTKPTSKTEPHYNREADARYADIYSGITTVDQNKAVPSSPAAGNQQIYQQGTSFPSARPAQNFSTGMAPSVNVVQQPSAAGQILAQISRQSSGGQVSGNAWSGSRPPFPAQQMAMQGVKTQSPPFGMGANHNFPANAASFSPLANPAVTPAAGGTAYPPLPNRTPAFAEAGQTGAQFQSRPAEGASVWPQWQGQHHGQTSAEPHAHQPQSQPEVYQEMLSIYEEQNATYNSDEFSELPMFPSFSE
SIO_010081: LOC116968900
subclass of: SO_0000673
so part of: LOC116968900
location: complement(join(5114637..5114726,5117363..5117508,5120740..5120908,5122141..5122282,5123138..5123240,5123731..5123833,5124786..5124846,5127626..5127777,5131727..5131801,5135439..5135573,5140385..5140461,5142663..5142748,5145452..5145517,5149246..5149354,5150584..5150797,5153169..5153382,5155997..5156041,5157610..5157669,5160072..5160189,5163731..5163752))
location: region:5114637-5163752:-1
so has part: feature:5163731-5163752:-1:exon
so has part: feature:5160072-5160189:-1:exon
so has part: feature:5157610-5157669:-1:exon
so has part: feature:5155997-5156041:-1:exon
so has part: feature:5153169-5153382:-1:exon
so has part: feature:5150584-5150797:-1:exon
so has part: feature:5149246-5149354:-1:exon
so has part: feature:5145452-5145517:-1:exon
so has part: feature:5142663-5142748:-1:exon
so has part: feature:5140385-5140461:-1:exon
so has part: feature:5135439-5135573:-1:exon
so has part: feature:5131727-5131801:-1:exon
so has part: feature:5127626-5127777:-1:exon
so has part: feature:5124786-5124846:-1:exon
so has part: feature:5123731-5123833:-1:exon
so has part: feature:5123138-5123240:-1:exon
so has part: feature:5122141-5122282:-1:exon
so has part: feature:5120740-5120908:-1:exon
so has part: feature:5117363-5117508:-1:exon
so has part: feature:5114637-5114726:-1:exon

XP_032871773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5163731-5163752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5160072-5160189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5157610-5157669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5155997-5156041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5153169-5153382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5150584-5150797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5149246-5149354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5145452-5145517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5142663-5142748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5140385-5140461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5135439-5135573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5131727-5131801:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5127626-5127777:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5124786-5124846:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5123731-5123833:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5123138-5123240:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5122141-5122282:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5120740-5120908:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5117363-5117508:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5114637-5114726:-1:exon

LOC116968900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator-like isoform X2
translation: MAAAVNPVVEMASEIGGPLSVAGSAGSAAQTQDSGGIMSRAPKRHPGLDFDDDDDDDDGEGSSKFPRCEGDEGSNDKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSMDGTYKPSFLTDQELKHLILEAADGFLFVVACETGKIIYVSDSVMPVLNQPQSEWFGSSLYNQVHPEDVEKLREQLSTSENAMTGAGRILDLKTGTVKKEGQQTSMRMCMGSRRSFICRVRCGNAPVNPASMNRLSFLRNRCRNGLGPLKEGEPQFVVVHCTGFIKAWPPAGVTLPDDEPDGSQGNKFCLVTIGRLQVTSSPSCVDMKGISLPTEFLSRHNTNGIFTFVDHRCVGTVGYQPQELLGKDIVDFAHPEDKGLLRDSFQQVVTLKGQVLSVMFRFQTKSREWAVIRTSCFTFQNPYSDDIEYIVCTNTNVKHLQQTPALTGPEELTYEHPQVGVQAPATERTKPTSKTEPHYNREADARYADIYSGITTVDQNKAVPSSPAAGNQQIYQQGTSFPSARPAQNFSTGMAPSVNVVQQPSAAGQILAQISRQSSGGQVSGNAWSGSRPPFPAQMAMQGVKTQSPPFGMGANHNFPANAASFSPLANPAVTPAAGGTAYPPLPNRTPAFAEAGQTGAQFQSRPAEGASVWPQWQGQHHGQTSAEPHAHQPQSQPEVYQEMLSIYEEQNATYNSDEFSELPMFPSFSE
SIO_010081: LOC116968900
subclass of: SO_0000673
so part of: LOC116968900
location: complement(join(5114637..5114726,5117363..5117508,5120740..5120905,5122141..5122282,5123138..5123240,5123731..5123845,5124786..5124846,5127626..5127777,5131727..5131801,5135439..5135573,5140385..5140461,5142663..5142748,5145452..5145517,5149246..5149354,5150584..5150797,5153169..5153382,5155997..5156041,5157610..5157669,5160072..5160189,5163731..5163752))
location: region:5114637-5163752:-1
so has part: feature:5163731-5163752:-1:exon
so has part: feature:5160072-5160189:-1:exon
so has part: feature:5157610-5157669:-1:exon
so has part: feature:5155997-5156041:-1:exon
so has part: feature:5153169-5153382:-1:exon
so has part: feature:5150584-5150797:-1:exon
so has part: feature:5149246-5149354:-1:exon
so has part: feature:5145452-5145517:-1:exon
so has part: feature:5142663-5142748:-1:exon
so has part: feature:5140385-5140461:-1:exon
so has part: feature:5135439-5135573:-1:exon
so has part: feature:5131727-5131801:-1:exon
so has part: feature:5127626-5127777:-1:exon
so has part: feature:5124786-5124846:-1:exon
so has part: feature:5123731-5123845:-1:exon
so has part: feature:5123138-5123240:-1:exon
so has part: feature:5122141-5122282:-1:exon
so has part: feature:5120740-5120905:-1:exon
so has part: feature:5117363-5117508:-1:exon
so has part: feature:5114637-5114726:-1:exon

XP_032871771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5163731-5163752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5160072-5160189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5157610-5157669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5155997-5156041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5153169-5153382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5150584-5150797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5149246-5149354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5145452-5145517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5142663-5142748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5140385-5140461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5135439-5135573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5131727-5131801:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5127626-5127777:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5124786-5124846:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5123731-5123845:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5123138-5123240:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5122141-5122282:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5120740-5120905:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5117363-5117508:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5114637-5114726:-1:exon

LOC116968900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator-like isoform X1
translation: MAAAVNPVVEMASEIGGPLSVAGSAGSAAQTQDSGGIMSRAPKRHPGLDFDDDDDDDDGEGSSKFPRCEGDEGSNDKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSMDGTYKPSFLTDQELKHLILEAADGFLFVVACETGKIIYVSDSVMPVLNQPQSEWFGSSLYNQVHPEDVEKLREQLSTSENAMTGAGRILDLKTGTVKKEGQQTSMRMCMGSRRSFICRVRCGNAPVNPASMNRLSFLRNRCRNGLGPLKEGEPQFVVVHCTGFIKAWPPAGVTLPDDEPDGSQGNKFCLVTIGRLQVTSSPSCVDMKGISLPTEFLSRHNTNGIFTFVDHRCVGTVGYQPQELLGKDIVDFAHPEDKGLLRDSFQQVVTLKGQVLSVMFRFQTKSREWAVIRTSCFTFQNPYSDDIEYIVCTNTNVKHLQQTPALTGPEELTYEHPQVGVQAPATERTKPTSKTEPHYNREADARYADIYSGITTVDQNKAVPSSPAAGNQQIYQQGTSFPSARPAQNFSTGMAPSVNVVQQPSAAGQILAQISRQSSGGQVSGNAWSGSRPPFPAQQMAMQGVKTQSPPFGMGANHNFPANAASFSPLANPAVTPAAGGTAYPPLPNRTPAFAEAGQTGAQFQSRPAEGASVWPQWQGQHHGQTSAEPHAHQPQSQPEVYQEMLSIYEEQNATYNSDEFSELPMFPSFSE
SIO_010081: LOC116968900
subclass of: SO_0000673
so part of: LOC116968900
location: complement(join(5114637..5114726,5117363..5117508,5120740..5120908,5122141..5122282,5123138..5123240,5123731..5123845,5124786..5124846,5127626..5127777,5131727..5131801,5135439..5135573,5140385..5140461,5142663..5142748,5145452..5145517,5149246..5149354,5150584..5150797,5153169..5153382,5155997..5156041,5157610..5157669,5160072..5160189,5163731..5163752))
location: region:5114637-5163752:-1
so has part: feature:5163731-5163752:-1:exon
so has part: feature:5160072-5160189:-1:exon
so has part: feature:5157610-5157669:-1:exon
so has part: feature:5155997-5156041:-1:exon
so has part: feature:5153169-5153382:-1:exon
so has part: feature:5150584-5150797:-1:exon
so has part: feature:5149246-5149354:-1:exon
so has part: feature:5145452-5145517:-1:exon
so has part: feature:5142663-5142748:-1:exon
so has part: feature:5140385-5140461:-1:exon
so has part: feature:5135439-5135573:-1:exon
so has part: feature:5131727-5131801:-1:exon
so has part: feature:5127626-5127777:-1:exon
so has part: feature:5124786-5124846:-1:exon
so has part: feature:5123731-5123845:-1:exon
so has part: feature:5123138-5123240:-1:exon
so has part: feature:5122141-5122282:-1:exon
so has part: feature:5120740-5120908:-1:exon
so has part: feature:5117363-5117508:-1:exon
so has part: feature:5114637-5114726:-1:exon

XP_032871770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5163731-5163752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5160072-5160189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5157610-5157669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5155997-5156041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5153169-5153382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5150584-5150797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5149246-5149354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5145452-5145517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5142663-5142748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5140385-5140461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5135439-5135573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5131727-5131801:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5127626-5127777:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5124786-5124846:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5123731-5123845:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5123138-5123240:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5122141-5122282:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5120740-5120908:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5117363-5117508:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5114637-5114726:-1:exon

LOC116968900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor nuclear translocator-like isoform X5
translation: MASEIGGPLSVAGSAGSAAQTQDSGGIMSRAPKRHPGLDFDDDDDDDDGEGSSKFPRCEGDEGSNDKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSMDGTYKPSFLTDQELKHLILEAADGFLFVVACETGKIIYVSDSVMPVLNQPQSEWFGSSLYNQVHPEDVEKLREQLSTSENAMTGAGRILDLKTGTVKKEGQQTSMRMCMGSRRSFICRVRCGNAPVNPASMNRLSFLRNRCRNGLGPLKEGEPQFVVVHCTGFIKAWPPAGVTLPDDEPDGSQGNKFCLVTIGRLQVTSSPSCVDMKGISLPTEFLSRHNTNGIFTFVDHRCVGTVGYQPQELLGKDIVDFAHPEDKGLLRDSFQQVVTLKGQVLSVMFRFQTKSREWAVIRTSCFTFQNPYSDDIEYIVCTNTNVKHLQQTPALTGPEELTYEHPQVGVQAPATERTKPTSKTEPHYNREADARYADIYSGITTVDQNKAVPSSPAAGNQQIYQQGTSFPSARPAQNFSTGMAPSVNVVQQPSAAGQILAQISRQSSGGQVSGNAWSGSRPPFPAQQMAMQGVKTQSPPFGMGANHNFPANAASFSPLANPAVTPAAGGTAYPPLPNRTPAFAEAGQTGAQFQSRPAEGASVWPQWQGQHHGQTSAEPHAHQPQSQPEVYQEMLSIYEEQNATYNSDEFSELPMFPSFSE
SIO_010081: LOC116968900
subclass of: SO_0000673
so part of: LOC116968900
location: complement(join(5114637..5114726,5117363..5117508,5120740..5120908,5122141..5122282,5123138..5123240,5123731..5123845,5124786..5124846,5127626..5127777,5131727..5131801,5135439..5135573,5140385..5140461,5142663..5142748,5145452..5145517,5149246..5149354,5150584..5150797,5153169..5153382,5155997..5156041,5157610..5157669,5160072..5160181))
location: region:5114637-5160181:-1
so has part: feature:5160072-5160181:-1:exon
so has part: feature:5157610-5157669:-1:exon
so has part: feature:5155997-5156041:-1:exon
so has part: feature:5153169-5153382:-1:exon
so has part: feature:5150584-5150797:-1:exon
so has part: feature:5149246-5149354:-1:exon
so has part: feature:5145452-5145517:-1:exon
so has part: feature:5142663-5142748:-1:exon
so has part: feature:5140385-5140461:-1:exon
so has part: feature:5135439-5135573:-1:exon
so has part: feature:5131727-5131801:-1:exon
so has part: feature:5127626-5127777:-1:exon
so has part: feature:5124786-5124846:-1:exon
so has part: feature:5123731-5123845:-1:exon
so has part: feature:5123138-5123240:-1:exon
so has part: feature:5122141-5122282:-1:exon
so has part: feature:5120740-5120908:-1:exon
so has part: feature:5117363-5117508:-1:exon
so has part: feature:5114637-5114726:-1:exon

XP_032871774.1
type: Protein
SIO_000068: ncbiprotein

position:5160181:-1
position: 5160181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5160072-5160181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5157610-5157669:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5155997-5156041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5153169-5153382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5150584-5150797:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5149246-5149354:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5145452-5145517:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5142663-5142748:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5140385-5140461:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5135439-5135573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5131727-5131801:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5127626-5127777:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5124786-5124846:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5123731-5123845:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5123138-5123240:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5122141-5122282:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5120740-5120908:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5117363-5117508:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5114637-5114726:-1:exon

LOC116968941
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5185997..5187252)
location: region:5185997-5187252:-1
so has part: feature:5185997-5187252:-1:exon
subclass of: SO_0000011

116968941
type: Gene
SIO_000068: ncbigene

position:5185997:-1
position: 5185997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5187252:-1
position: 5187252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5185997-5187252:-1:exon

LOC116968941
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968941
product: uncharacterized LOC116968941, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004410559.1
SIO_010081: LOC116968941
subclass of: SO_0000673
so part of: LOC116968941
location: complement(join(5185997..5186167,5186978..5187080,5187161..5187252))
location: region:5185997-5187252:-1
so has part: feature:5187161-5187252:-1:exon
so has part: feature:5186978-5187080:-1:exon
so has part: feature:5185997-5186167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5187161-5187252:-1:exon

position:5187161:-1
position: 5187161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5186978-5187080:-1:exon

position:5186978:-1
position: 5186978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5187080:-1
position: 5187080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5185997-5186167:-1:exon

position:5186167:-1
position: 5186167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968941
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968941
product: uncharacterized LOC116968941, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004410560.1
SIO_010081: LOC116968941
subclass of: SO_0000673
so part of: LOC116968941
location: complement(join(5185997..5186187,5186978..5187080,5187161..5187252))
location: region:5185997-5187252:-1
so has part: feature:5187161-5187252:-1:exon
so has part: feature:5186978-5187080:-1:exon
so has part: feature:5185997-5186187:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5187161-5187252:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5186978-5187080:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5185997-5186187:-1:exon

position:5186187:-1
position: 5186187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968941
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968941
product: uncharacterized LOC116968941, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004410561.1
SIO_010081: LOC116968941
subclass of: SO_0000673
so part of: LOC116968941
location: complement(join(5185997..5186194,5186978..5187080,5187161..5187252))
location: region:5185997-5187252:-1
so has part: feature:5187161-5187252:-1:exon
so has part: feature:5186978-5187080:-1:exon
so has part: feature:5185997-5186194:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5187161-5187252:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5186978-5187080:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5185997-5186194:-1:exon

position:5186194:-1
position: 5186194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968940
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5188433..5190998
location: region:5188433-5190998:1
so has part: feature:5188433-5190998:1:exon
subclass of: SO_0000010

116968940
type: Gene
SIO_000068: ncbigene

position:5188433:1
position: 5188433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5190998:1
position: 5190998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5188433-5190998:1:exon

LOC116968940
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968940
product: ubiquitin carboxyl-terminal hydrolase MINDY-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033015936.1
SIO_010081: LOC116968940
subclass of: SO_0000673
so part of: LOC116968940
location: join(5188433..5189022,5190801..5190998)
location: region:5188433-5190998:1
so has part: feature:5188433-5189022:1:exon
so has part: feature:5190801-5190998:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5188433-5189022:1:exon

position:5189022:1
position: 5189022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5190801-5190998:1:exon

position:5190801:1
position: 5190801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase MINDY-1-like
translation: MDNAAFEKGDSIGLDTRPAAASVSAKPSDSGDSGRMEGCSDGLEGAGKMTGTDSQEPDSGKEPLPCVLALAESDGDVASLTPSLGSPDEEEMGDDLAEAEGPLAESADSDRVSAPSLGGCSETEQDGAQGAAPKPEVYRGDPSNTFYYVKWISWKGEKTPVITQSENGPCPLIAIMNILFLRWKVKIPPKTEVISVEQLMILLGNYRSTSVKRFQRSIDQCLMSSSLKTLRRQGTAERHKILE
SIO_010081: LOC116968940
subclass of: SO_0000673
so part of: LOC116968940
location: join(5188471..5189022,5190801..5190980)
location: region:5188471-5190980:1
so has part: feature:5188471-5189022:1:exon
so has part: feature:5190801-5190980:1:exon

XP_032871827.1
type: Protein
SIO_000068: ncbiprotein

position:5188471:1
position: 5188471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5190980:1
position: 5190980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5188471-5189022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5190801-5190980:1:exon

LOC116968893
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5546699..>5563196)
location: region:5546699-5563196:-1
so has part: feature:5546699-5563196:-1:exon
subclass of: SO_0000010

116968893
type: Gene
SIO_000068: ncbigene

position:5546699:-1
position: 5546699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5563196:-1
position: 5563196
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5546699-5563196:-1:exon

LOC116968893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968893
product: nuclear factor 7, ovary-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015873.1
SIO_010081: LOC116968893
subclass of: SO_0000673
so part of: LOC116968893
location: complement(join(5546699..5547219,5549611..5549726,5553940..5553962,5555407..5555637,5559875..5559920,5560956..5561155,5563029..>5563196))
location: region:5546699-5563196:-1
so has part: feature:5563029-5563196:-1:exon
so has part: feature:5560956-5561155:-1:exon
so has part: feature:5559875-5559920:-1:exon
so has part: feature:5555407-5555637:-1:exon
so has part: feature:5553940-5553962:-1:exon
so has part: feature:5549611-5549726:-1:exon
so has part: feature:5546699-5547219:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5563029-5563196:-1:exon

position:5563029:-1
position: 5563029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5560956-5561155:-1:exon

position:5560956:-1
position: 5560956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5561155:-1
position: 5561155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5559875-5559920:-1:exon

position:5559875:-1
position: 5559875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5559920:-1
position: 5559920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5555407-5555637:-1:exon

position:5555407:-1
position: 5555407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5555637:-1
position: 5555637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5553940-5553962:-1:exon

position:5553940:-1
position: 5553940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5553962:-1
position: 5553962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5549611-5549726:-1:exon

position:5549611:-1
position: 5549611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5549726:-1
position: 5549726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5546699-5547219:-1:exon

position:5547219:-1
position: 5547219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 7, ovary-like
translation: TTTTTTTAGALRRELTCSVCLELFRQPVILGCGHSFCRACIGRVWESRERQRRLVQTFPAQSFTKNFLAANLVERLREAKTVPRTPSVAWPRQCREHDKPLTIYCATDQQLICDLCRTSKAHRSCDILLVQELTDEYPQKKRRKELKEKIEKEFAKMIEFLIEQREMLLMQLEEEEKVALAEMEAGEMDLAATIVELEKSIAYIQSKLRKSVSLEEMLDTISQPIPRLGKTTLMKLNPRWETFTGPLQLIVWKRMQDIINPVPENLRFNMASAHPNLRFNSDCTSVESSSSRGPAADNPKRFGSFHAVLATARFSSGRHYWEVEVGASPAWYLGLTCVHSARKGYVKLRPSKGYWSICKLLLYLMNNERQRPLHVASALSRVGVYLDFEAGLVSFYDACGMALLCTFSTAFRCPVVPFFSPSRGVDSILKLRHF
SIO_010081: LOC116968893
subclass of: SO_0000673
so part of: LOC116968893
location: complement(join(5546699..5547219,5549611..5549726,5553940..5553962,5555407..5555637,5559875..5559920,5560956..5561155,5563029..>5563196))
location: region:5546699-5563196:-1
so has part: feature:5563029-5563196:-1:exon
so has part: feature:5560956-5561155:-1:exon
so has part: feature:5559875-5559920:-1:exon
so has part: feature:5555407-5555637:-1:exon
so has part: feature:5553940-5553962:-1:exon
so has part: feature:5549611-5549726:-1:exon
so has part: feature:5546699-5547219:-1:exon

XP_032871764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5563029-5563196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5560956-5561155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5559875-5559920:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5555407-5555637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5553940-5553962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5549611-5549726:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5546699-5547219:-1:exon

c47h1orf189
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: c47h1orf189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5566679..5576641
location: region:5566679-5576641:1
so has part: feature:5566679-5576641:1:exon
subclass of: SO_0000010

116968921
type: Gene
SIO_000068: ncbigene

position:5566679:1
position: 5566679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5576641:1
position: 5576641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5566679-5576641:1:exon

c47h1orf189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: c47h1orf189
product: chromosome 47 C1orf189 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033015910.1
SIO_010081: c47h1orf189
subclass of: SO_0000673
so part of: c47h1orf189
location: join(5566679..5566832,5568867..5568907,5569892..5570021,5576413..5576641)
location: region:5566679-5576641:1
so has part: feature:5566679-5566832:1:exon
so has part: feature:5568867-5568907:1:exon
so has part: feature:5569892-5570021:1:exon
so has part: feature:5576413-5576641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5566679-5566832:1:exon

position:5566832:1
position: 5566832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5568867-5568907:1:exon

position:5568867:1
position: 5568867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5568907:1
position: 5568907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5569892-5570021:1:exon

position:5569892:1
position: 5569892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5570021:1
position: 5570021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5576413-5576641:1:exon

position:5576413:1
position: 5576413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c47h1orf189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: c47h1orf189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf189 homolog
translation: MCSKQKGRARQWQENMKRHAEVEQLEAYLSSWRKVLTNNINLKAMEATSKAKITEQQLRTIDREVKVARRAILLMRQAALKELLQDESKQYVEELKLMGKTFYKERL
SIO_010081: c47h1orf189
subclass of: SO_0000673
so part of: c47h1orf189
location: join(5566782..5566832,5568867..5568907,5569892..5570021,5576413..5576514)
location: region:5566782-5576514:1
so has part: feature:5566782-5566832:1:exon
so has part: feature:5568867-5568907:1:exon
so has part: feature:5569892-5570021:1:exon
so has part: feature:5576413-5576514:1:exon

XP_032871801.1
type: Protein
SIO_000068: ncbiprotein

position:5566782:1
position: 5566782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5576514:1
position: 5576514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5566782-5566832:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5568867-5568907:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5569892-5570021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5576413-5576514:1:exon

LOC116968920
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5584194..5605624)
location: region:5584194-5605624:-1
so has part: feature:5584194-5605624:-1:exon
subclass of: SO_0000010

116968920
type: Gene
SIO_000068: ncbigene

position:5584194:-1
position: 5584194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5605624:-1
position: 5605624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5584194-5605624:-1:exon

LOC116968920
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968920
product: protein CASC4-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033015909.1
SIO_010081: LOC116968920
subclass of: SO_0000673
so part of: LOC116968920
location: complement(join(5584194..5584610,5588309..5588352,5589944..5590043,5591765..5591819,5604428..5604774,5605451..5605596))
location: region:5584194-5605596:-1
so has part: feature:5605451-5605596:-1:exon
so has part: feature:5604428-5604774:-1:exon
so has part: feature:5591765-5591819:-1:exon
so has part: feature:5589944-5590043:-1:exon
so has part: feature:5588309-5588352:-1:exon
so has part: feature:5584194-5584610:-1:exon

position:5605596:-1
position: 5605596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5605451-5605596:-1:exon

position:5605451:-1
position: 5605451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5604428-5604774:-1:exon

position:5604428:-1
position: 5604428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5604774:-1
position: 5604774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5591765-5591819:-1:exon

position:5591765:-1
position: 5591765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5591819:-1
position: 5591819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5589944-5590043:-1:exon

position:5589944:-1
position: 5589944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5590043:-1
position: 5590043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5588309-5588352:-1:exon

position:5588309:-1
position: 5588309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5588352:-1
position: 5588352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5584194-5584610:-1:exon

position:5584610:-1
position: 5584610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968920
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968920
product: protein CASC4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033015908.1
SIO_010081: LOC116968920
subclass of: SO_0000673
so part of: LOC116968920
location: complement(join(5584196..5584613,5588309..5588352,5589944..5590043,5591765..5591819,5604428..5604774,5605606..5605624))
location: region:5584196-5605624:-1
so has part: feature:5605606-5605624:-1:exon
so has part: feature:5604428-5604774:-1:exon
so has part: feature:5591765-5591819:-1:exon
so has part: feature:5589944-5590043:-1:exon
so has part: feature:5588309-5588352:-1:exon
so has part: feature:5584196-5584613:-1:exon

position:5584196:-1
position: 5584196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5605606-5605624:-1:exon

position:5605606:-1
position: 5605606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5604428-5604774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5591765-5591819:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5589944-5590043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5588309-5588352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5584196-5584613:-1:exon

position:5584613:-1
position: 5584613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968920
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968920
product: protein CASC4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033015907.1
SIO_010081: LOC116968920
subclass of: SO_0000673
so part of: LOC116968920
location: complement(join(5584196..5584613,5588309..5588352,5589944..5590043,5591765..5591819,5604428..5604774,5605451..5605596))
location: region:5584196-5605596:-1
so has part: feature:5605451-5605596:-1:exon
so has part: feature:5604428-5604774:-1:exon
so has part: feature:5591765-5591819:-1:exon
so has part: feature:5589944-5590043:-1:exon
so has part: feature:5588309-5588352:-1:exon
so has part: feature:5584196-5584613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5605451-5605596:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5604428-5604774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5591765-5591819:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5589944-5590043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5588309-5588352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5584196-5584613:-1:exon

LOC116968920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CASC4-like isoform X2
translation: MGGKSPAFLVMGLVVLIAAMALYLWTVMSENSLLRLESDRTRDEGRQLRSARDQLQTQLGESTMVLNDKKHYISEIDDKFLKTSGALEKQVAEVRQCMEQKNKISADFEKQKNDLKAKEDQQKALEEEKKKVETLLQEFKKLCGANNTADMLKNLCPKEAEKPPPKVVN
SIO_010081: LOC116968920
subclass of: SO_0000673
so part of: LOC116968920
location: complement(join(5584603..5584610,5588309..5588352,5589944..5590043,5591765..5591819,5604428..5604730))
location: region:5584603-5604730:-1
so has part: feature:5604428-5604730:-1:exon
so has part: feature:5591765-5591819:-1:exon
so has part: feature:5589944-5590043:-1:exon
so has part: feature:5588309-5588352:-1:exon
so has part: feature:5584603-5584610:-1:exon

XP_032871800.1
type: Protein
SIO_000068: ncbiprotein

position:5584603:-1
position: 5584603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5604730:-1
position: 5604730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5604428-5604730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5591765-5591819:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5589944-5590043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5588309-5588352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5584603-5584610:-1:exon

LOC116968920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CASC4-like isoform X1
translation: MGGKSPAFLVMGLVVLIAAMALYLWTVMSENSLLRLESDRTRDEGRQLRSARDQLQTQLGESTMVLNDKKHYISEIDDKFLKTSGALEKQVAEVRQCMEQKNKISADFEKQKNDLKAKEDQQKALEEEKKKVETLLQEFKKLCGANNTADMLKNLCPKEAEKPPPKVVVN
SIO_010081: LOC116968920
subclass of: SO_0000673
so part of: LOC116968920
location: complement(join(5584603..5584613,5588309..5588352,5589944..5590043,5591765..5591819,5604428..5604730))
location: region:5584603-5604730:-1
so has part: feature:5604428-5604730:-1:exon
so has part: feature:5591765-5591819:-1:exon
so has part: feature:5589944-5590043:-1:exon
so has part: feature:5588309-5588352:-1:exon
so has part: feature:5584603-5584613:-1:exon

XP_032871798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5604428-5604730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5591765-5591819:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5589944-5590043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5588309-5588352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5584603-5584613:-1:exon

LOC116968920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CASC4-like isoform X1
translation: MGGKSPAFLVMGLVVLIAAMALYLWTVMSENSLLRLESDRTRDEGRQLRSARDQLQTQLGESTMVLNDKKHYISEIDDKFLKTSGALEKQVAEVRQCMEQKNKISADFEKQKNDLKAKEDQQKALEEEKKKVETLLQEFKKLCGANNTADMLKNLCPKEAEKPPPKVVVN
SIO_010081: LOC116968920
subclass of: SO_0000673
so part of: LOC116968920
location: complement(join(5584603..5584613,5588309..5588352,5589944..5590043,5591765..5591819,5604428..5604730))
location: region:5584603-5604730:-1
so has part: feature:5604428-5604730:-1:exon
so has part: feature:5591765-5591819:-1:exon
so has part: feature:5589944-5590043:-1:exon
so has part: feature:5588309-5588352:-1:exon
so has part: feature:5584603-5584613:-1:exon

XP_032871799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5604428-5604730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5591765-5591819:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5589944-5590043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5588309-5588352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5584603-5584613:-1:exon

tpm3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tpm3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5636638..5685531
location: region:5636638-5685531:1
so has part: feature:5636638-5685531:1:exon
subclass of: SO_0000010

116968919
type: Gene
SIO_000068: ncbigene

position:5636638:1
position: 5636638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5685531:1
position: 5685531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5636638-5685531:1:exon

tpm3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpm3
product: tropomyosin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 131 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033015906.1
SIO_010081: tpm3
subclass of: SO_0000673
so part of: tpm3
location: join(5636638..5636969,5644290..5644415,5672859..5672992,5675027..5675144,5676554..5676624,5685252..5685531)
location: region:5636638-5685531:1
so has part: feature:5636638-5636969:1:exon
so has part: feature:5644290-5644415:1:exon
so has part: feature:5672859-5672992:1:exon
so has part: feature:5675027-5675144:1:exon
so has part: feature:5676554-5676624:1:exon
so has part: feature:5685252-5685531:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5636638-5636969:1:exon

position:5636969:1
position: 5636969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5644290-5644415:1:exon

position:5644290:1
position: 5644290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5644415:1
position: 5644415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5672859-5672992:1:exon

position:5672859:1
position: 5672859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5672992:1
position: 5672992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5675027-5675144:1:exon

position:5675027:1
position: 5675027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5675144:1
position: 5675144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5676554-5676624:1:exon

position:5676554:1
position: 5676554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5676624:1
position: 5676624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5685252-5685531:1:exon

position:5685252:1
position: 5685252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tpm3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpm3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X2
translation: MEAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELAAMQKRLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAEVTESKCAELEEELKNVTNNLKSLEAQAEKVGLPFSLVIPCSFHSFHPPPPPHPPLLLSVAAVGASRVGLKGSARHNKKMSKSCFTLLHKL
SIO_010081: tpm3
subclass of: SO_0000673
so part of: tpm3
location: join(5636856..5636969,5644290..5644415,5672859..5672992,5675027..5675144,5676554..5676624,5685252..5685513)
location: region:5636856-5685513:1
so has part: feature:5636856-5636969:1:exon
so has part: feature:5644290-5644415:1:exon
so has part: feature:5672859-5672992:1:exon
so has part: feature:5675027-5675144:1:exon
so has part: feature:5676554-5676624:1:exon
so has part: feature:5685252-5685513:1:exon

XP_032871797.1
type: Protein
SIO_000068: ncbiprotein

position:5636856:1
position: 5636856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5685513:1
position: 5685513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5636856-5636969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5644290-5644415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5672859-5672992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5675027-5675144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5676554-5676624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5685252-5685513:1:exon

tpm3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpm3
product: tropomyosin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033015905.1
SIO_010081: tpm3
subclass of: SO_0000673
so part of: tpm3
location: join(5656794..5656957,5672859..5672992,5675027..5675144,5676554..5676624,5685252..5685531)
location: region:5656794-5685531:1
so has part: feature:5656794-5656957:1:exon
so has part: feature:5672859-5672992:1:exon
so has part: feature:5675027-5675144:1:exon
so has part: feature:5676554-5676624:1:exon
so has part: feature:5685252-5685531:1:exon

position:5656794:1
position: 5656794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5656794-5656957:1:exon

position:5656957:1
position: 5656957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5672859-5672992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5675027-5675144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5676554-5676624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5685252-5685531:1:exon

tpm3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpm3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X1
translation: MAAATATSLEAVKRKIKVLQQQADSAEERAERLQKVGAAERKAREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAEVTESKCAELEEELKNVTNNLKSLEAQAEKVGLPFSLVIPCSFHSFHPPPPPHPPLLLSVAAVGASRVGLKGSARHNKKMSKSCFTLLHKL
SIO_010081: tpm3
subclass of: SO_0000673
so part of: tpm3
location: join(5656820..5656957,5672859..5672992,5675027..5675144,5676554..5676624,5685252..5685513)
location: region:5656820-5685513:1
so has part: feature:5656820-5656957:1:exon
so has part: feature:5672859-5672992:1:exon
so has part: feature:5675027-5675144:1:exon
so has part: feature:5676554-5676624:1:exon
so has part: feature:5685252-5685513:1:exon

XP_032871796.1
type: Protein
SIO_000068: ncbiprotein

position:5656820:1
position: 5656820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5656820-5656957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5672859-5672992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5675027-5675144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5676554-5676624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5685252-5685513:1:exon

LOC116968875
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5756185..5768274
location: region:5756185-5768274:1
so has part: feature:5756185-5768274:1:exon
subclass of: SO_0000010

116968875
type: Gene
SIO_000068: ncbigene

position:5756185:1
position: 5756185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5768274:1
position: 5768274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5756185-5768274:1:exon

LOC116968875
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968875
product: gamma-secretase subunit APH-1A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033015849.1
SIO_010081: LOC116968875
subclass of: SO_0000673
so part of: LOC116968875
location: join(5756185..5756371,5760777..5760947,5762723..5762796,5764006..5764128,5765160..5765286,5766555..5766678,5767885..5768274)
location: region:5756185-5768274:1
so has part: feature:5756185-5756371:1:exon
so has part: feature:5760777-5760947:1:exon
so has part: feature:5762723-5762796:1:exon
so has part: feature:5764006-5764128:1:exon
so has part: feature:5765160-5765286:1:exon
so has part: feature:5766555-5766678:1:exon
so has part: feature:5767885-5768274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5756185-5756371:1:exon

position:5756371:1
position: 5756371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5760777-5760947:1:exon

position:5760777:1
position: 5760777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5760947:1
position: 5760947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5762723-5762796:1:exon

position:5762723:1
position: 5762723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5762796:1
position: 5762796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5764006-5764128:1:exon

position:5764006:1
position: 5764006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5764128:1
position: 5764128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5765160-5765286:1:exon

position:5765160:1
position: 5765160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5765286:1
position: 5765286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5766555-5766678:1:exon

position:5766555:1
position: 5766555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5766678:1
position: 5766678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5767885-5768274:1:exon

position:5767885:1
position: 5767885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968875
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968875
product: gamma-secretase subunit APH-1A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033015850.1
SIO_010081: LOC116968875
subclass of: SO_0000673
so part of: LOC116968875
location: join(5756192..5756371,5760777..5760947,5762723..5762796,5764006..5764128,5765160..5765286,5766555..5766682,5767885..5768274)
location: region:5756192-5768274:1
so has part: feature:5756192-5756371:1:exon
so has part: feature:5760777-5760947:1:exon
so has part: feature:5762723-5762796:1:exon
so has part: feature:5764006-5764128:1:exon
so has part: feature:5765160-5765286:1:exon
so has part: feature:5766555-5766682:1:exon
so has part: feature:5767885-5768274:1:exon

position:5756192:1
position: 5756192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5756192-5756371:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5760777-5760947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5762723-5762796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5764006-5764128:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5765160-5765286:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5766555-5766682:1:exon

position:5766682:1
position: 5766682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5767885-5768274:1:exon

LOC116968875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-secretase subunit APH-1A-like
translation: MSAAVFFGCTFIAFGPASALLLITVFGDPLRVIILVAGSFFWLVSLLLSSLLWFIAVQLSNKENRNVQRGLLIMGAGISVLFQEAFRFAYYKLLKRADQGLVAISEDGQSPISIGQMAYVSGLAFGVISGAFSVINVLSDSLGPGVVGIHGGSPYFFLTSAFFTMALVLLHTFWGVVFFDACEKRNWLVLAVVRLQPVLPPD
SIO_010081: LOC116968875
subclass of: SO_0000673
so part of: LOC116968875
location: join(5756259..5756371,5760777..5760947,5762723..5762796,5764006..5764128,5765160..5765286,5766555)
location: region:5756259-5766555:1
so has part: feature:5756259-5756371:1:exon
so has part: feature:5760777-5760947:1:exon
so has part: feature:5762723-5762796:1:exon
so has part: feature:5764006-5764128:1:exon
so has part: feature:5765160-5765286:1:exon
so has part: feature:5766555-5766555:1:exon

XP_032871740.1
type: Protein
SIO_000068: ncbiprotein

position:5756259:1
position: 5756259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5756259-5756371:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5760777-5760947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5762723-5762796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5764006-5764128:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5765160-5765286:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5766555-5766555:1:exon

LOC116968875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-secretase subunit APH-1A-like
translation: MSAAVFFGCTFIAFGPASALLLITVFGDPLRVIILVAGSFFWLVSLLLSSLLWFIAVQLSNKENRNVQRGLLIMGAGISVLFQEAFRFAYYKLLKRADQGLVAISEDGQSPISIGQMAYVSGLAFGVISGAFSVINVLSDSLGPGVVGIHGGSPYFFLTSAFFTMALVLLHTFWGVVFFDACEKRNWLVLAVVRLQPVLPPD
SIO_010081: LOC116968875
subclass of: SO_0000673
so part of: LOC116968875
location: join(5756259..5756371,5760777..5760947,5762723..5762796,5764006..5764128,5765160..5765286,5766555)
location: region:5756259-5766555:1
so has part: feature:5756259-5756371:1:exon
so has part: feature:5760777-5760947:1:exon
so has part: feature:5762723-5762796:1:exon
so has part: feature:5764006-5764128:1:exon
so has part: feature:5765160-5765286:1:exon
so has part: feature:5766555-5766555:1:exon

XP_032871741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5756259-5756371:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5760777-5760947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5762723-5762796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5764006-5764128:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5765160-5765286:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5766555-5766555:1:exon

ca14
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ca14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5770109..5790854)
location: region:5770109-5790854:-1
so has part: feature:5770109-5790854:-1:exon
subclass of: SO_0000010

116968917
type: Gene
SIO_000068: ncbigene

position:5770109:-1
position: 5770109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5790854:-1
position: 5790854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5770109-5790854:-1:exon

ca14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ca14
product: carbonic anhydrase 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033015901.1
SIO_010081: ca14
subclass of: SO_0000673
so part of: ca14
location: complement(join(5770109..5770427,5772725..5772851,5776736..5776893,5780376..5780442,5783788..5783883,5786008..5786150,5787676..5787855,5788544..5788564,5790617..5790854))
location: region:5770109-5790854:-1
so has part: feature:5790617-5790854:-1:exon
so has part: feature:5788544-5788564:-1:exon
so has part: feature:5787676-5787855:-1:exon
so has part: feature:5786008-5786150:-1:exon
so has part: feature:5783788-5783883:-1:exon
so has part: feature:5780376-5780442:-1:exon
so has part: feature:5776736-5776893:-1:exon
so has part: feature:5772725-5772851:-1:exon
so has part: feature:5770109-5770427:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5790617-5790854:-1:exon

position:5790617:-1
position: 5790617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5788544-5788564:-1:exon

position:5788544:-1
position: 5788544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5788564:-1
position: 5788564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5787676-5787855:-1:exon

position:5787676:-1
position: 5787676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5787855:-1
position: 5787855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5786008-5786150:-1:exon

position:5786008:-1
position: 5786008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5786150:-1
position: 5786150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5783788-5783883:-1:exon

position:5783788:-1
position: 5783788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5783883:-1
position: 5783883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5780376-5780442:-1:exon

position:5780376:-1
position: 5780376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5780442:-1
position: 5780442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5776736-5776893:-1:exon

position:5776736:-1
position: 5776736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5776893:-1
position: 5776893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5772725-5772851:-1:exon

position:5772725:-1
position: 5772725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5772851:-1
position: 5772851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5770109-5770427:-1:exon

position:5770427:-1
position: 5770427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ca14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ca14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 14
translation: MQLGTLALATCNLLLILPAACVERANHWEYDGSLGGGHWREEFEHCGKEAQSPVNIRSQDAHFDPTLKPVRLKGFTARPGPTYTLRNNGHTVQMSLPSTLAITSLPRQFTASQLHLHWGSSQWPRGSEHLIDGQRSSAELHVVLYNSDKYRNVSEAMRKPNGLAVLAILLEVGKFKNPAYENILSHLESITFAGQEVEIPSFAVRGLLPKRLDQYFTYRGSLTTPPCYQSVRWIVFHRRVLLSLSQLKTLRTGVFRTHAGTLPRLPLVNNRREVQPLRNRKVKASFVVGWAISFRRAVRKLLKMLSVNMRH
SIO_010081: ca14
subclass of: SO_0000673
so part of: ca14
location: complement(join(5770357..5770427,5772725..5772851,5776736..5776893,5780376..5780442,5783788..5783883,5786008..5786150,5787676..5787855,5788544..5788564,5790617..5790689))
location: region:5770357-5790689:-1
so has part: feature:5790617-5790689:-1:exon
so has part: feature:5788544-5788564:-1:exon
so has part: feature:5787676-5787855:-1:exon
so has part: feature:5786008-5786150:-1:exon
so has part: feature:5783788-5783883:-1:exon
so has part: feature:5780376-5780442:-1:exon
so has part: feature:5776736-5776893:-1:exon
so has part: feature:5772725-5772851:-1:exon
so has part: feature:5770357-5770427:-1:exon

XP_032871792.1
type: Protein
SIO_000068: ncbiprotein

position:5770357:-1
position: 5770357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5790689:-1
position: 5790689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5790617-5790689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5788544-5788564:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5787676-5787855:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5786008-5786150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5783788-5783883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5780376-5780442:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5776736-5776893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5772725-5772851:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5770357-5770427:-1:exon

LOC116968894
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6701021..6738032
location: region:6701021-6738032:1
so has part: feature:6701021-6738032:1:exon
subclass of: SO_0000010

116968894
type: Gene
SIO_000068: ncbigene

position:6701021:1
position: 6701021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6738032:1
position: 6738032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6701021-6738032:1:exon

LOC116968894
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968894
product: histone-lysine N-methyltransferase ASH1L-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015874.1
SIO_010081: LOC116968894
subclass of: SO_0000673
so part of: LOC116968894
location: join(6701021..6701151,6736435..6737099,6737965..6738032)
location: region:6701021-6738032:1
so has part: feature:6701021-6701151:1:exon
so has part: feature:6736435-6737099:1:exon
so has part: feature:6737965-6738032:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6701021-6701151:1:exon

position:6701151:1
position: 6701151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6736435-6737099:1:exon

position:6736435:1
position: 6736435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6737099:1
position: 6737099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6737965-6738032:1:exon

position:6737965:1
position: 6737965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968894
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase ASH1L-like
translation: MEQRNVLLGSMNPPLGLDAEGSPGKNTPSSCYSKAVGRREEELEGTALDEEDGTHWKQEEGKVVDLRQVLDPPNSDQQQFSVKETNFTEGSLKLKIGLQPKRTKKPPKSLENYVCRPAIKTTIKHSRTKVAKSGKISEEREEDSEQKRVRFARRSKILWSLALDDFHFLIKSNSSVSSDTPWKQAFQPDLLMPI
SIO_010081: LOC116968894
subclass of: SO_0000673
so part of: LOC116968894
location: join(6736583..6737099,6737965..6738032)
location: region:6736583-6738032:1
so has part: feature:6736583-6737099:1:exon
so has part: feature:6737965-6738032:1:exon

XP_032871765.1
type: Protein
SIO_000068: ncbiprotein

position:6736583:1
position: 6736583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6736583-6737099:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6737965-6738032:1:exon

clk2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: clk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7014717..7050403
location: region:7014717-7050403:1
so has part: feature:7014717-7050403:1:exon
subclass of: SO_0000010

116968928
type: Gene
SIO_000068: ncbigene

position:7014717:1
position: 7014717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7050403:1
position: 7050403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7014717-7050403:1:exon

clk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: clk2
product: CDC like kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033015921.1
SIO_010081: clk2
subclass of: SO_0000673
so part of: clk2
location: join(7014717..7014859,7023682..7023839,7034077..7034317,7037037..7037130,7037538..7037604,7039311..7039427,7043046..7043212,7044439..7044533,7044666..7044795,7047229..7047311,7047389..7047489,7048303..7048393,7049427..7050403)
location: region:7014717-7050403:1
so has part: feature:7014717-7014859:1:exon
so has part: feature:7023682-7023839:1:exon
so has part: feature:7034077-7034317:1:exon
so has part: feature:7037037-7037130:1:exon
so has part: feature:7037538-7037604:1:exon
so has part: feature:7039311-7039427:1:exon
so has part: feature:7043046-7043212:1:exon
so has part: feature:7044439-7044533:1:exon
so has part: feature:7044666-7044795:1:exon
so has part: feature:7047229-7047311:1:exon
so has part: feature:7047389-7047489:1:exon
so has part: feature:7048303-7048393:1:exon
so has part: feature:7049427-7050403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7014717-7014859:1:exon

position:7014859:1
position: 7014859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7023682-7023839:1:exon

position:7023682:1
position: 7023682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7023839:1
position: 7023839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7034077-7034317:1:exon

position:7034077:1
position: 7034077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7034317:1
position: 7034317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7037037-7037130:1:exon

position:7037037:1
position: 7037037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7037130:1
position: 7037130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7037538-7037604:1:exon

position:7037538:1
position: 7037538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7037604:1
position: 7037604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7039311-7039427:1:exon

position:7039311:1
position: 7039311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7039427:1
position: 7039427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7043046-7043212:1:exon

position:7043046:1
position: 7043046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7043212:1
position: 7043212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7044439-7044533:1:exon

position:7044439:1
position: 7044439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7044533:1
position: 7044533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7044666-7044795:1:exon

position:7044666:1
position: 7044666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7044795:1
position: 7044795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7047229-7047311:1:exon

position:7047229:1
position: 7047229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7047311:1
position: 7047311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7047389-7047489:1:exon

position:7047389:1
position: 7047389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7047489:1
position: 7047489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7048303-7048393:1:exon

position:7048303:1
position: 7048303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7048393:1
position: 7048393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7049427-7050403:1:exon

position:7049427:1
position: 7049427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

clk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: clk2
product: CDC like kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033015922.1
SIO_010081: clk2
subclass of: SO_0000673
so part of: clk2
location: join(7014717..7014859,7023682..7023839,7034077..7034317,7037037..7037130,7037538..7037604,7039311..7039427,7043046..7043212,7044439..7044533,7044666..7044795,7047229..7047311,7047410..7047489,7048303..7048393,7049427..7050403)
location: region:7014717-7050403:1
so has part: feature:7014717-7014859:1:exon
so has part: feature:7023682-7023839:1:exon
so has part: feature:7034077-7034317:1:exon
so has part: feature:7037037-7037130:1:exon
so has part: feature:7037538-7037604:1:exon
so has part: feature:7039311-7039427:1:exon
so has part: feature:7043046-7043212:1:exon
so has part: feature:7044439-7044533:1:exon
so has part: feature:7044666-7044795:1:exon
so has part: feature:7047229-7047311:1:exon
so has part: feature:7047410-7047489:1:exon
so has part: feature:7048303-7048393:1:exon
so has part: feature:7049427-7050403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7014717-7014859:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7023682-7023839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7034077-7034317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7037037-7037130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7037538-7037604:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7039311-7039427:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7043046-7043212:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7044439-7044533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7044666-7044795:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7047229-7047311:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7047410-7047489:1:exon

position:7047410:1
position: 7047410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7048303-7048393:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7049427-7050403:1:exon

clk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: clk2
product: CDC like kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033015923.1
SIO_010081: clk2
subclass of: SO_0000673
so part of: clk2
location: join(7014720..7014859,7023682..7023839,7034077..7034317,7037538..7037604,7039311..7039427,7043046..7043212,7044439..7044533,7044666..7044795,7047229..7047311,7047410..7047489,7048303..7048393,7049427..7049856)
location: region:7014720-7049856:1
so has part: feature:7014720-7014859:1:exon
so has part: feature:7023682-7023839:1:exon
so has part: feature:7034077-7034317:1:exon
so has part: feature:7037538-7037604:1:exon
so has part: feature:7039311-7039427:1:exon
so has part: feature:7043046-7043212:1:exon
so has part: feature:7044439-7044533:1:exon
so has part: feature:7044666-7044795:1:exon
so has part: feature:7047229-7047311:1:exon
so has part: feature:7047410-7047489:1:exon
so has part: feature:7048303-7048393:1:exon
so has part: feature:7049427-7049856:1:exon

position:7014720:1
position: 7014720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7049856:1
position: 7049856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7014720-7014859:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7023682-7023839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7034077-7034317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7037538-7037604:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7039311-7039427:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7043046-7043212:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7044439-7044533:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7044666-7044795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7047229-7047311:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7047410-7047489:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7048303-7048393:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7049427-7049856:1:exon

clk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: clk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein kinase CLK2 isoform X1
translation: MPRLRRYRSSDRESRESYHDRYRRSRRGRRRSRSRSSDRDRRHRNESYMRSRSIGDCSCDRRLYNERRFCDAYRGNYSRDQGDGYHPPEYCARNSYDYRRSHERGRSYRSRKSSRRKHKRRRHRSRSYSRSSSRSHQSSRRAKSVEDDNEGHLIYRTGDWLQERYEIVSTLGEGTFGKVIECIDHRRGSSRVALKIIKNVEKYREAARLEINVLEKINVQDPENKFQCVQMFDWFDYHGHICISFELLGQSTFDFLKDNNYSPYPIHQVRHMAFQTCHAVNFLHENKLTHTDLKPENILFVNSDSEVVGNVEKKREERVVKNTATRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIVFEYYLGFTLFQPIPFRLQTHDNREHLAMMERILGPIPARMIRKTRKQKYFYHGRLDWDDNSSAGRYVRENCKPLKRYMITETEEHCQLFGLIERMLDYEPSKRITLADALRHPFFDLLKAEPKSTKPWDSNRDISR
SIO_010081: clk2
subclass of: SO_0000673
so part of: clk2
location: join(7023682..7023839,7034077..7034317,7037037..7037130,7037538..7037604,7039311..7039427,7043046..7043212,7044439..7044533,7044666..7044795,7047229..7047311,7047389..7047489,7048303..7048393,7049427..7049612)
location: region:7023682-7049612:1
so has part: feature:7023682-7023839:1:exon
so has part: feature:7034077-7034317:1:exon
so has part: feature:7037037-7037130:1:exon
so has part: feature:7037538-7037604:1:exon
so has part: feature:7039311-7039427:1:exon
so has part: feature:7043046-7043212:1:exon
so has part: feature:7044439-7044533:1:exon
so has part: feature:7044666-7044795:1:exon
so has part: feature:7047229-7047311:1:exon
so has part: feature:7047389-7047489:1:exon
so has part: feature:7048303-7048393:1:exon
so has part: feature:7049427-7049612:1:exon

XP_032871812.1
type: Protein
SIO_000068: ncbiprotein

position:7049612:1
position: 7049612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7023682-7023839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7034077-7034317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7037037-7037130:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7037538-7037604:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7039311-7039427:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7043046-7043212:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7044439-7044533:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7044666-7044795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7047229-7047311:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7047389-7047489:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7048303-7048393:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7049427-7049612:1:exon

clk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: clk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein kinase CLK2 isoform X2
translation: MPRLRRYRSSDRESRESYHDRYRRSRRGRRRSRSRSSDRDRRHRNESYMRSRSIGDCSCDRRLYNERRFCDAYRGNYSRDQGDGYHPPEYCARNSYDYRRSHERGRSYRSRKSSRRKHKRRRHRSRSYSRSSSRSHQSSRRAKSVEDDNEGHLIYRTGDWLQERYEIVSTLGEGTFGKVIECIDHRRGSSRVALKIIKNVEKYREAARLEINVLEKINVQDPENKFQCVQMFDWFDYHGHICISFELLGQSTFDFLKDNNYSPYPIHQVRHMAFQTCHAVNFLHENKLTHTDLKPENILFVNSDSEVVGNVEKKREERVVKNTATRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIVFEYYLGFTLFQTHDNREHLAMMERILGPIPARMIRKTRKQKYFYHGRLDWDDNSSAGRYVRENCKPLKRYMITETEEHCQLFGLIERMLDYEPSKRITLADALRHPFFDLLKAEPKSTKPWDSNRDISR
SIO_010081: clk2
subclass of: SO_0000673
so part of: clk2
location: join(7023682..7023839,7034077..7034317,7037037..7037130,7037538..7037604,7039311..7039427,7043046..7043212,7044439..7044533,7044666..7044795,7047229..7047311,7047410..7047489,7048303..7048393,7049427..7049612)
location: region:7023682-7049612:1
so has part: feature:7023682-7023839:1:exon
so has part: feature:7034077-7034317:1:exon
so has part: feature:7037037-7037130:1:exon
so has part: feature:7037538-7037604:1:exon
so has part: feature:7039311-7039427:1:exon
so has part: feature:7043046-7043212:1:exon
so has part: feature:7044439-7044533:1:exon
so has part: feature:7044666-7044795:1:exon
so has part: feature:7047229-7047311:1:exon
so has part: feature:7047410-7047489:1:exon
so has part: feature:7048303-7048393:1:exon
so has part: feature:7049427-7049612:1:exon

XP_032871813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7023682-7023839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7034077-7034317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7037037-7037130:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7037538-7037604:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7039311-7039427:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7043046-7043212:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7044439-7044533:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7044666-7044795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7047229-7047311:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7047410-7047489:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7048303-7048393:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7049427-7049612:1:exon

clk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: clk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein kinase CLK2 isoform X3
translation: MFDWFDYHGHICISFELLGQSTFDFLKDNNYSPYPIHQVRHMAFQTCHAVNFLHENKLTHTDLKPENILFVNSDSEVVGNVEKKREERVVKNTATRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIVFEYYLGFTLFQTHDNREHLAMMERILGPIPARMIRKTRKQKYFYHGRLDWDDNSSAGRYVRENCKPLKRYMITETEEHCQLFGLIERMLDYEPSKRITLADALRHPFFDLLKAEPKSTKPWDSNRDISR
SIO_010081: clk2
subclass of: SO_0000673
so part of: clk2
location: join(7043059..7043212,7044439..7044533,7044666..7044795,7047229..7047311,7047410..7047489,7048303..7048393,7049427..7049612)
location: region:7043059-7049612:1
so has part: feature:7043059-7043212:1:exon
so has part: feature:7044439-7044533:1:exon
so has part: feature:7044666-7044795:1:exon
so has part: feature:7047229-7047311:1:exon
so has part: feature:7047410-7047489:1:exon
so has part: feature:7048303-7048393:1:exon
so has part: feature:7049427-7049612:1:exon

XP_032871814.1
type: Protein
SIO_000068: ncbiprotein

position:7043059:1
position: 7043059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7043059-7043212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7044439-7044533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7044666-7044795:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7047229-7047311:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7047410-7047489:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7048303-7048393:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7049427-7049612:1:exon

she
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: she
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7688101..7712443)
location: region:7688101-7712443:-1
so has part: feature:7688101-7712443:-1:exon
subclass of: SO_0000010

116968907
type: Gene
SIO_000068: ncbigene

position:7688101:-1
position: 7688101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7712443:-1
position: 7712443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7688101-7712443:-1:exon

she
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: she
product: Src homology 2 domain containing E
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033015891.1
SIO_010081: she
subclass of: SO_0000673
so part of: she
location: complement(join(7688101..7688826,7692815..7692934,7694393..7694555,7696964..7697200,7708679..7708808,7710948..7712443))
location: region:7688101-7712443:-1
so has part: feature:7710948-7712443:-1:exon
so has part: feature:7708679-7708808:-1:exon
so has part: feature:7696964-7697200:-1:exon
so has part: feature:7694393-7694555:-1:exon
so has part: feature:7692815-7692934:-1:exon
so has part: feature:7688101-7688826:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7710948-7712443:-1:exon

position:7710948:-1
position: 7710948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7708679-7708808:-1:exon

position:7708679:-1
position: 7708679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7708808:-1
position: 7708808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7696964-7697200:-1:exon

position:7696964:-1
position: 7696964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7697200:-1
position: 7697200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7694393-7694555:-1:exon

position:7694393:-1
position: 7694393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7694555:-1
position: 7694555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7692815-7692934:-1:exon

position:7692815:-1
position: 7692815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7692934:-1
position: 7692934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7688101-7688826:-1:exon

position:7688826:-1
position: 7688826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

she
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: she
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing adapter protein E
translation: MAKWFKDFQLSLKTRPKTEDTGVARSGTEGEGANRSRRATQGEVTPRGVGREVKSATERGRGESGLGKLGKAVSAGIQGKSTGLQGKTVGTAVLRGKTETNKSLIHGKNPTGLIKNGLTIKKDNGKLIKGYGENGNSIPGKSIKNSLADPGSGDEIGKSVGKPLLKRGQNLSKSGQSLSGKLGLNPGKITGKSPAKTELKTDPIAGKPDPKTGKADLKVGKVDMKSGKPDLKLKKADLKTGKPDTKTPKTPDLKPGKTDLKPSKPAAQTPGKTALNLGKITGTNPGKNVLKSGKTGQSLGKTGLNLGKITGAKPGKSVQNPGKLSGSNYILSKHRLIKVENQEKNGKNLLNRIQSVKKEEETGKAKQDMIIIMEDYADPYDAKKRETGQNEAERVGENDGYMEPYDAQQMITEIRRRGSKDPLGKQSLLYDSPYEPGEMGAKTEGVGNAAMERTGTPWPIDGCLPENDGRPAAEYEQPWEWKTEHIAKALAVQFDSAERVSPPKEEKVRHHARHPSWTQKAPKQQISESCDSGEKVDPTIPLEKQLWYHGSVTRQEAESRLQACKEASYLVRNSESGNCKYSLALKTSQGCVHIILAQTKDNKYTLNQNSALFTSIPEVVQYYCTEKLPFKDAEHMNLLYPVPNRQQ
SIO_010081: she
subclass of: SO_0000673
so part of: she
location: complement(join(7688640..7688826,7692815..7692934,7694393..7694555,7696964..7697200,7708679..7708808,7710948..7712054))
location: region:7688640-7712054:-1
so has part: feature:7710948-7712054:-1:exon
so has part: feature:7708679-7708808:-1:exon
so has part: feature:7696964-7697200:-1:exon
so has part: feature:7694393-7694555:-1:exon
so has part: feature:7692815-7692934:-1:exon
so has part: feature:7688640-7688826:-1:exon

XP_032871782.1
type: Protein
SIO_000068: ncbiprotein

position:7688640:-1
position: 7688640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7712054:-1
position: 7712054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7710948-7712054:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7708679-7708808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7696964-7697200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7694393-7694555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7692815-7692934:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7688640-7688826:-1:exon

tdrd10
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tdrd10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7727644..7750494
location: region:7727644-7750494:1
so has part: feature:7727644-7750494:1:exon
subclass of: SO_0000010

116968895
type: Gene
SIO_000068: ncbigene

position:7727644:1
position: 7727644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7750494:1
position: 7750494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7727644-7750494:1:exon

tdrd10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tdrd10
product: tudor domain containing 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015875.1
SIO_010081: tdrd10
subclass of: SO_0000673
so part of: tdrd10
location: join(7727644..7727735,7732129..7732223,7735307..7735359,7735597..7735667,7739247..7739403,7740949..7740988,7741755..7741824,7744392..7744539,7746719..7746858,7749232..7749419,7750481..7750494)
location: region:7727644-7750494:1
so has part: feature:7727644-7727735:1:exon
so has part: feature:7732129-7732223:1:exon
so has part: feature:7735307-7735359:1:exon
so has part: feature:7735597-7735667:1:exon
so has part: feature:7739247-7739403:1:exon
so has part: feature:7740949-7740988:1:exon
so has part: feature:7741755-7741824:1:exon
so has part: feature:7744392-7744539:1:exon
so has part: feature:7746719-7746858:1:exon
so has part: feature:7749232-7749419:1:exon
so has part: feature:7750481-7750494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7727644-7727735:1:exon

position:7727735:1
position: 7727735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7732129-7732223:1:exon

position:7732129:1
position: 7732129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7732223:1
position: 7732223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7735307-7735359:1:exon

position:7735307:1
position: 7735307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7735359:1
position: 7735359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7735597-7735667:1:exon

position:7735597:1
position: 7735597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7735667:1
position: 7735667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7739247-7739403:1:exon

position:7739247:1
position: 7739247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7739403:1
position: 7739403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7740949-7740988:1:exon

position:7740949:1
position: 7740949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7740988:1
position: 7740988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7741755-7741824:1:exon

position:7741755:1
position: 7741755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7741824:1
position: 7741824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7744392-7744539:1:exon

position:7744392:1
position: 7744392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7744539:1
position: 7744539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7746719-7746858:1:exon

position:7746719:1
position: 7746719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7746858:1
position: 7746858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7749232-7749419:1:exon

position:7749232:1
position: 7749232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7749419:1
position: 7749419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7750481-7750494:1:exon

position:7750481:1
position: 7750481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tdrd10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tdrd10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tudor domain-containing protein 10
translation: MEKPESSNEQLASRAFSPEGPSNNNLETKKTAGLKKNEVYIGNLPSDITEDQIMQLFAAFEPVTVRRIVSGLKCFAFVDVGDPQNMMLAVSHINNTIYCGRRLIVRDLVKSRSCERPLELLDQELLPLEKVDNDSDKAPRAVPCPGRSRDRSEPVYAVPLEMRSLLQVEMLSSCFKTTEWIVESASVRGEVGLMVMETFPQMPFFWAMNLTPETYMKMCQLFTALSVVTQDQPFLMKAEVQRGRRCMAEYPGESGDWNRCWIVDVVENKVILLYVDSGNTACVPAAAVKSLDKDEFWDVPPLVQPFVLHQGKSADGRSSTEVPLR
SIO_010081: tdrd10
subclass of: SO_0000673
so part of: tdrd10
location: join(7727734..7727735,7732129..7732223,7735307..7735359,7735597..7735667,7739247..7739403,7740949..7740988,7741755..7741824,7744392..7744539,7746719..7746858,7749232..7749419,7750481..7750494)
location: region:7727734-7750494:1
so has part: feature:7727734-7727735:1:exon
so has part: feature:7732129-7732223:1:exon
so has part: feature:7735307-7735359:1:exon
so has part: feature:7735597-7735667:1:exon
so has part: feature:7739247-7739403:1:exon
so has part: feature:7740949-7740988:1:exon
so has part: feature:7741755-7741824:1:exon
so has part: feature:7744392-7744539:1:exon
so has part: feature:7746719-7746858:1:exon
so has part: feature:7749232-7749419:1:exon
so has part: feature:7750481-7750494:1:exon

XP_032871766.1
type: Protein
SIO_000068: ncbiprotein

position:7727734:1
position: 7727734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7727734-7727735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7732129-7732223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7735307-7735359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7735597-7735667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7739247-7739403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7740949-7740988:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7741755-7741824:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7744392-7744539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7746719-7746858:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7749232-7749419:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7750481-7750494:1:exon

ube2q1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ube2q1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7753260..7802086)
location: region:7753260-7802086:-1
so has part: feature:7753260-7802086:-1:exon
subclass of: SO_0000010

116968896
type: Gene
SIO_000068: ncbigene

position:7753260:-1
position: 7753260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7802086:-1
position: 7802086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7753260-7802086:-1:exon

ube2q1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ube2q1
product: ubiquitin conjugating enzyme E2 Q1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015876.1
SIO_010081: ube2q1
subclass of: SO_0000673
so part of: ube2q1
location: complement(join(7753260..7753797,7755336..7755402,7759543..7759638,7761829..7761877,7764723..7764781,7767018..7767108,7770099..7770159,7771692..7771776,7774763..7774903,7777394..7777444,7780028..7780132,7781939..7782151,7795212..7795324,7795732..7795914,7798735..7798868,7801427..7801546,7802082..7802086))
location: region:7753260-7802086:-1
so has part: feature:7802082-7802086:-1:exon
so has part: feature:7801427-7801546:-1:exon
so has part: feature:7798735-7798868:-1:exon
so has part: feature:7795732-7795914:-1:exon
so has part: feature:7795212-7795324:-1:exon
so has part: feature:7781939-7782151:-1:exon
so has part: feature:7780028-7780132:-1:exon
so has part: feature:7777394-7777444:-1:exon
so has part: feature:7774763-7774903:-1:exon
so has part: feature:7771692-7771776:-1:exon
so has part: feature:7770099-7770159:-1:exon
so has part: feature:7767018-7767108:-1:exon
so has part: feature:7764723-7764781:-1:exon
so has part: feature:7761829-7761877:-1:exon
so has part: feature:7759543-7759638:-1:exon
so has part: feature:7755336-7755402:-1:exon
so has part: feature:7753260-7753797:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7802082-7802086:-1:exon

position:7802082:-1
position: 7802082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7801427-7801546:-1:exon

position:7801427:-1
position: 7801427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7801546:-1
position: 7801546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7798735-7798868:-1:exon

position:7798735:-1
position: 7798735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7798868:-1
position: 7798868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7795732-7795914:-1:exon

position:7795732:-1
position: 7795732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7795914:-1
position: 7795914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7795212-7795324:-1:exon

position:7795212:-1
position: 7795212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7795324:-1
position: 7795324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7781939-7782151:-1:exon

position:7781939:-1
position: 7781939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7782151:-1
position: 7782151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7780028-7780132:-1:exon

position:7780028:-1
position: 7780028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7780132:-1
position: 7780132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7777394-7777444:-1:exon

position:7777394:-1
position: 7777394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7777444:-1
position: 7777444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7774763-7774903:-1:exon

position:7774763:-1
position: 7774763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7774903:-1
position: 7774903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7771692-7771776:-1:exon

position:7771692:-1
position: 7771692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7771776:-1
position: 7771776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7770099-7770159:-1:exon

position:7770099:-1
position: 7770099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7770159:-1
position: 7770159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7767018-7767108:-1:exon

position:7767018:-1
position: 7767018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7767108:-1
position: 7767108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7764723-7764781:-1:exon

position:7764723:-1
position: 7764723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7764781:-1
position: 7764781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7761829-7761877:-1:exon

position:7761829:-1
position: 7761829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7761877:-1
position: 7761877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7759543-7759638:-1:exon

position:7759543:-1
position: 7759543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7759638:-1
position: 7759638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7755336-7755402:-1:exon

position:7755336:-1
position: 7755336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7755402:-1
position: 7755402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7753260-7753797:-1:exon

position:7753797:-1
position: 7753797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ube2q1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ube2q1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 Q1
translation: MRFLYSELLKYSPDEPADSLFMPAQDNRLQIKPGITFHLYISTAPCGDGALFDKSCSEPPTMEGDESHHPLFENPKQGKLRTKVENGEGTIPVESSDIVPTWDGIQHGERLRTMSCSDKILRWNVLGLQGALLSHFIHPVYLSSITLGYLYSHGHLARAVCCRMSRDGDELRAALPYPYILNHPLLSGEMKGVRTGGWSGVGGGGGDNGSVSDPASNPSLQESYPLVPPIWFVESDDPSLAAVLERLVDLKKGSTLLLQHLKRIISDLCKLYNLPQHPDVEMLDQPLPTEQSTRDDVTSEEEDEEMAEDNEDLDHYEMKEEEPAEGKKSEDEGIGKENLAILEKIKKNQRQDYLNGAVSGSVQATDRLMKELRDIYRSESFKAGNYAVELVNDSLYDWNVKILKVDQDSALHNDLQILKEKEGVDFILLNFSFKDNFPFDPPFVRVVSPVLSGGYVLGGGAICMELLTKQGWSSAYSIESVIMQISATLVKGKARIQFGANKSQYSLSRAQQSYKSLVQIHEKNGWYTPPKEDG
SIO_010081: ube2q1
subclass of: SO_0000673
so part of: ube2q1
location: complement(join(7753766..7753797,7755336..7755402,7759543..7759638,7761829..7761877,7764723..7764781,7767018..7767108,7770099..7770159,7771692..7771776,7774763..7774903,7777394..7777444,7780028..7780132,7781939..7782151,7795212..7795324,7795732..7795914,7798735..7798868,7801427..7801546,7802082..7802086))
location: region:7753766-7802086:-1
so has part: feature:7802082-7802086:-1:exon
so has part: feature:7801427-7801546:-1:exon
so has part: feature:7798735-7798868:-1:exon
so has part: feature:7795732-7795914:-1:exon
so has part: feature:7795212-7795324:-1:exon
so has part: feature:7781939-7782151:-1:exon
so has part: feature:7780028-7780132:-1:exon
so has part: feature:7777394-7777444:-1:exon
so has part: feature:7774763-7774903:-1:exon
so has part: feature:7771692-7771776:-1:exon
so has part: feature:7770099-7770159:-1:exon
so has part: feature:7767018-7767108:-1:exon
so has part: feature:7764723-7764781:-1:exon
so has part: feature:7761829-7761877:-1:exon
so has part: feature:7759543-7759638:-1:exon
so has part: feature:7755336-7755402:-1:exon
so has part: feature:7753766-7753797:-1:exon

XP_032871767.1
type: Protein
SIO_000068: ncbiprotein

position:7753766:-1
position: 7753766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7802082-7802086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7801427-7801546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7798735-7798868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7795732-7795914:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7795212-7795324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7781939-7782151:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7780028-7780132:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7777394-7777444:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7774763-7774903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7771692-7771776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7770099-7770159:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7767018-7767108:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7764723-7764781:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7761829-7761877:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7759543-7759638:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7755336-7755402:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7753766-7753797:-1:exon

adar
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: adar
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7803538..7871727)
location: region:7803538-7871727:-1
so has part: feature:7803538-7871727:-1:exon
subclass of: SO_0000010

116968922
type: Gene
SIO_000068: ncbigene

position:7803538:-1
position: 7803538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7871727:-1
position: 7871727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7803538-7871727:-1:exon

adar
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: adar
product: adenosine deaminase RNA specific
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_033015911.1
SIO_010081: adar
subclass of: SO_0000673
so part of: adar
location: complement(join(7803538..7803635,7807104..7807275,7807725..7807878,7810724..7810932,7812500..7812635,7815419..7815588,7817978..7818158,7822492..7824055,7871530..7871727))
location: region:7803538-7871727:-1
so has part: feature:7871530-7871727:-1:exon
so has part: feature:7822492-7824055:-1:exon
so has part: feature:7817978-7818158:-1:exon
so has part: feature:7815419-7815588:-1:exon
so has part: feature:7812500-7812635:-1:exon
so has part: feature:7810724-7810932:-1:exon
so has part: feature:7807725-7807878:-1:exon
so has part: feature:7807104-7807275:-1:exon
so has part: feature:7803538-7803635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7871530-7871727:-1:exon

position:7871530:-1
position: 7871530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7822492-7824055:-1:exon

position:7822492:-1
position: 7822492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7824055:-1
position: 7824055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7817978-7818158:-1:exon

position:7817978:-1
position: 7817978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7818158:-1
position: 7818158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7815419-7815588:-1:exon

position:7815419:-1
position: 7815419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7815588:-1
position: 7815588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7812500-7812635:-1:exon

position:7812500:-1
position: 7812500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7812635:-1
position: 7812635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7810724-7810932:-1:exon

position:7810724:-1
position: 7810724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7810932:-1
position: 7810932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7807725-7807878:-1:exon

position:7807725:-1
position: 7807725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7807878:-1
position: 7807878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7807104-7807275:-1:exon

position:7807104:-1
position: 7807104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7807275:-1
position: 7807275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7803538-7803635:-1:exon

position:7803635:-1
position: 7803635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

adar
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: adar
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-specific adenosine deaminase
translation: MSRGIDGDRRSHREKPTSHRQCNRYSHSRQQSDPAPPAFIPSSQGLSADQFRSQQVQFLTSQIAQAPAFVVQHQGSYQQRPRVFHPPPYCSLPRARSWNHHRVCPLPVARPRIPPQNGTKSSELDEGLSRLLSGLSICSPGGTSQHDVVRVLGDLRPGESLTAPKIARRLGVQKKEANHVLYRLLEENRVRKEGTTPPLWCLPRDAEVAAKAKRQWSAPEGGGLSRPVKQEKEEDEDSSESSGCEPASMEDLDNQKDRIFHFLLEKTKATALDIAKNVGLKSARQINPTLQSLENQGDLCKETASPYIWTLADRKKEVLLRKRKLHDLGAAVIGAVPPAVISTEPLESAAPAPETVDEIQVKEESNIGNGQQEEEEEEEEEVVKPSPTVMPAQTNKANHAGSDYYGNTSANCQWATDDIPDNLNIINCVGGEDGVVGLPQGMLPGKPNAEQHPVLTPNERLRACLSKNPVSGLMEFSQGSALQCEFILLDQTGPSHDPRFRMQAAIDGRKFPPAEANSKKTAKKEAATNALRVLLKEMLGEDIELPPSSPPHEAMSTVECPPAAGDIGSEPPISVAQPMLPAGKNPVCMLMEYAQKSGNACEFQLVSQSGPPHDPRFTIMVKLGNETFPAATANSKKLAKMFAAKAAVLLLLGNSPQFPSKPSDTNMEDAHGPIPCLTAGDLEAAQAAGLGDLIAFLNKNPIGGLLEYARSKGFAAELKMIDQSGPPHDPRFTYQAKVGGRWFPPVSSSSKKQAKQEAADAALRILIGEGERAARSGDFCSELPMSGGTMHDQIAMLTHQCFNNLTTRVQHSLLGRKILAAIIMKRGDDDLGTTVSLGTGNRCVKGEELSLKGETVNDCHAEIISRRCFIR
SIO_010081: adar
subclass of: SO_0000673
so part of: adar
location: complement(join(7803538..7803635,7807104..7807275,7807725..7807878,7810724..7810932,7812500..7812635,7815419..7815588,7817978..7818158,7822492..7823987))
location: region:7803538-7823987:-1
so has part: feature:7822492-7823987:-1:exon
so has part: feature:7817978-7818158:-1:exon
so has part: feature:7815419-7815588:-1:exon
so has part: feature:7812500-7812635:-1:exon
so has part: feature:7810724-7810932:-1:exon
so has part: feature:7807725-7807878:-1:exon
so has part: feature:7807104-7807275:-1:exon
so has part: feature:7803538-7803635:-1:exon

XP_032871802.1
type: Protein
SIO_000068: ncbiprotein

position:7823987:-1
position: 7823987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7822492-7823987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7817978-7818158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7815419-7815588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7812500-7812635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7810724-7810932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7807725-7807878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7807104-7807275:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7803538-7803635:-1:exon

LOC116968923
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968923
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7840087..7850186
location: region:7840087-7850186:1
so has part: feature:7840087-7850186:1:exon
subclass of: SO_0000010

116968923
type: Gene
SIO_000068: ncbigene

position:7840087:1
position: 7840087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7850186:1
position: 7850186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7840087-7850186:1:exon

LOC116968923
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968923
product: extracellular matrix protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033015913.1
SIO_010081: LOC116968923
subclass of: SO_0000673
so part of: LOC116968923
location: join(7840087..7840261,7847459..7847790,7849468..7850186)
location: region:7840087-7850186:1
so has part: feature:7840087-7840261:1:exon
so has part: feature:7847459-7847790:1:exon
so has part: feature:7849468-7850186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7840087-7840261:1:exon

position:7840261:1
position: 7840261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7847459-7847790:1:exon

position:7847459:1
position: 7847459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7847790:1
position: 7847790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7849468-7850186:1:exon

position:7849468:1
position: 7849468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968923
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968923
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extracellular matrix protein 1-like
translation: MEGERATLQTRGGLAKRKLTFTFPRECPDGRNIVIICRYVGQRKSDPPDLRPGTNFKQLLRQADALQRMEDAYAKCCGGQNRWTRLHCALAGWMNSLDQYCDEELLVITLWYECCKLWGNKRFDCFTQAAPSRSYIP
SIO_010081: LOC116968923
subclass of: SO_0000673
so part of: LOC116968923
location: join(7847515..7847790,7849468..7849605)
location: region:7847515-7849605:1
so has part: feature:7847515-7847790:1:exon
so has part: feature:7849468-7849605:1:exon

XP_032871804.1
type: Protein
SIO_000068: ncbiprotein

position:7847515:1
position: 7847515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7849605:1
position: 7849605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7847515-7847790:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7849468-7849605:1:exon

LOC116968897
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7853858..7868392
location: region:7853858-7868392:1
so has part: feature:7853858-7868392:1:exon
subclass of: SO_0000010

116968897
type: Gene
SIO_000068: ncbigene

position:7853858:1
position: 7853858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7868392:1
position: 7868392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7853858-7868392:1:exon

LOC116968897
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968897
product: extracellular matrix protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015877.1
SIO_010081: LOC116968897
subclass of: SO_0000673
so part of: LOC116968897
location: join(7853858..7853915,7859799..7860136,7861587..7861843,7862999..7863086,7868097..7868392)
location: region:7853858-7868392:1
so has part: feature:7853858-7853915:1:exon
so has part: feature:7859799-7860136:1:exon
so has part: feature:7861587-7861843:1:exon
so has part: feature:7862999-7863086:1:exon
so has part: feature:7868097-7868392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7853858-7853915:1:exon

position:7853915:1
position: 7853915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7859799-7860136:1:exon

position:7859799:1
position: 7859799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7860136:1
position: 7860136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7861587-7861843:1:exon

position:7861587:1
position: 7861587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7861843:1
position: 7861843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7862999-7863086:1:exon

position:7862999:1
position: 7862999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7863086:1
position: 7863086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7868097-7868392:1:exon

position:7868097:1
position: 7868097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968897
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extracellular matrix protein 1-like
translation: MCLGTGVRGQVCGDRCVETVPIDGAAPTTDGCSNPPVGARHLSRVARAPPGSMISPWGFASPEIHFPPPKPNQNNIDNICSLRRFRPVYELATMASDPSGHHREMARTINQLETVYAKCCAGSDKAACAARSFTPPTNPVPLLQWSQLLVHFCMEPTEKSGASTPCCLKVGAARDTCFASRAIFPNHDREVHFLNLAEVCLKELDILCRSPIEVLKDGPSSILVKALRKNCCKGQTAAKAKKCASGERVRFADQACKKEAKKWSDTHGCCKTTGASCFDTKYLANVKVIAKTPNDINLKQF
SIO_010081: LOC116968897
subclass of: SO_0000673
so part of: LOC116968897
location: join(7853858..7853915,7859799..7860136,7861587..7861843,7862999..7863086,7868097..7868261)
location: region:7853858-7868261:1
so has part: feature:7853858-7853915:1:exon
so has part: feature:7859799-7860136:1:exon
so has part: feature:7861587-7861843:1:exon
so has part: feature:7862999-7863086:1:exon
so has part: feature:7868097-7868261:1:exon

XP_032871768.1
type: Protein
SIO_000068: ncbiprotein

position:7868261:1
position: 7868261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7853858-7853915:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7859799-7860136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7861587-7861843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7862999-7863086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7868097-7868261:1:exon

LOC116968924
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7878817..7885944
location: region:7878817-7885944:1
so has part: feature:7878817-7885944:1:exon
subclass of: SO_0000010

116968924
type: Gene
SIO_000068: ncbigene

position:7878817:1
position: 7878817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7885944:1
position: 7885944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7878817-7885944:1:exon

LOC116968924
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968924
product: extracellular matrix protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033015914.1
SIO_010081: LOC116968924
subclass of: SO_0000673
so part of: LOC116968924
location: join(7878817..7878837,7883082..7883413,7885239..7885944)
location: region:7878817-7885944:1
so has part: feature:7878817-7878837:1:exon
so has part: feature:7883082-7883413:1:exon
so has part: feature:7885239-7885944:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7878817-7878837:1:exon

position:7878837:1
position: 7878837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7883082-7883413:1:exon

position:7883082:1
position: 7883082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7883413:1
position: 7883413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7885239-7885944:1:exon

position:7885239:1
position: 7885239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968924
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extracellular matrix protein 1-like
translation: MEGERATLQTRGGLAKRKLTFTFPRECPDGRNIGIICRYVGQRKSDPPDLRPGTNFKQLLRQADALQRMEDAYAKCCGGHNRWTRLHCALAGWMNSLDQYCDEELLVITLWYECCKLWGNKRFDCFTQAAPSRSYIP
SIO_010081: LOC116968924
subclass of: SO_0000673
so part of: LOC116968924
location: join(7883138..7883413,7885239..7885376)
location: region:7883138-7885376:1
so has part: feature:7883138-7883413:1:exon
so has part: feature:7885239-7885376:1:exon

XP_032871805.1
type: Protein
SIO_000068: ncbiprotein

position:7883138:1
position: 7883138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7885376:1
position: 7885376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7883138-7883413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7885239-7885376:1:exon

prpf3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: prpf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <7961857..7970853
location: region:7961857-7970853:1
so has part: feature:7961857-7970853:1:exon
subclass of: SO_0000010

116968899
type: Gene
SIO_000068: ncbigene

position:7961857:1
position: 7961857
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:7970853:1
position: 7970853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7961857-7970853:1:exon

prpf3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: prpf3
product: pre-mRNA processing factor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015878.1
SIO_010081: prpf3
subclass of: SO_0000673
so part of: prpf3
location: join(<7961857..7961968,7963671..7963806,7964284..7964391,7965483..7965596,7966686..7966804,7966910..7966990,7967595..7967656,7969029..7970853)
location: region:7961857-7970853:1
so has part: feature:7961857-7961968:1:exon
so has part: feature:7963671-7963806:1:exon
so has part: feature:7964284-7964391:1:exon
so has part: feature:7965483-7965596:1:exon
so has part: feature:7966686-7966804:1:exon
so has part: feature:7966910-7966990:1:exon
so has part: feature:7967595-7967656:1:exon
so has part: feature:7969029-7970853:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7961857-7961968:1:exon

position:7961968:1
position: 7961968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7963671-7963806:1:exon

position:7963671:1
position: 7963671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7963806:1
position: 7963806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7964284-7964391:1:exon

position:7964284:1
position: 7964284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7964391:1
position: 7964391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7965483-7965596:1:exon

position:7965483:1
position: 7965483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7965596:1
position: 7965596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7966686-7966804:1:exon

position:7966686:1
position: 7966686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7966804:1
position: 7966804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7966910-7966990:1:exon

position:7966910:1
position: 7966910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7966990:1
position: 7966990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7967595-7967656:1:exon

position:7967595:1
position: 7967595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7967656:1
position: 7967656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7969029-7970853:1:exon

position:7969029:1
position: 7969029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

prpf3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: prpf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp3
translation: CVCAISPSLRTSDNLANEQKFHGITNLVEHPTQISPPVDTDKPVTLGVYLTKKEQKKLRRQARREGLKEMQEKIRLGLMPPPRPTVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRLKAHQDANSARKLTAHQRREKKMKKLKEDLSQGTHIAVYRIRNLSNSAKKFKVETNAAQLYLSGTVVLHKDVNVVVVEGGPKAQKKFKRLMLHRVKWAEQTSSRDDDDDGSDDDAVKKVNKCALVWEGTAKERSFGDIKFKQCPTESMAREHFKKHGVEHYWDLALSQSVLEVTED
SIO_010081: prpf3
subclass of: SO_0000673
so part of: prpf3
location: join(<7961857..7961968,7963671..7963806,7964284..7964391,7965483..7965596,7966686..7966804,7966910..7966990,7967595..7967656,7969029..7969178)
location: region:7961857-7969178:1
so has part: feature:7961857-7961968:1:exon
so has part: feature:7963671-7963806:1:exon
so has part: feature:7964284-7964391:1:exon
so has part: feature:7965483-7965596:1:exon
so has part: feature:7966686-7966804:1:exon
so has part: feature:7966910-7966990:1:exon
so has part: feature:7967595-7967656:1:exon
so has part: feature:7969029-7969178:1:exon

XP_032871769.1
type: Protein
SIO_000068: ncbiprotein

position:7969178:1
position: 7969178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7961857-7961968:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7963671-7963806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7964284-7964391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7965483-7965596:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7966686-7966804:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7966910-7966990:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7967595-7967656:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7969029-7969178:1:exon

rprd2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rprd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7977778..8037795
location: region:7977778-8037795:1
so has part: feature:7977778-8037795:1:exon
subclass of: SO_0000010

116968918
type: Gene
SIO_000068: ncbigene

position:7977778:1
position: 7977778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8037795:1
position: 8037795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7977778-8037795:1:exon

rprd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rprd2
product: regulation of nuclear pre-mRNA domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033015904.1
SIO_010081: rprd2
subclass of: SO_0000673
so part of: rprd2
location: join(7977778..7978389,8005563..8005692,8010889..8010989,8014007..8014045,8015919..8015971,8017024..8017150,8021049..8021224,8022410..8022704,8028643..8028864,8033275..8033490,8034446..8037795)
location: region:7977778-8037795:1
so has part: feature:7977778-7978389:1:exon
so has part: feature:8005563-8005692:1:exon
so has part: feature:8010889-8010989:1:exon
so has part: feature:8014007-8014045:1:exon
so has part: feature:8015919-8015971:1:exon
so has part: feature:8017024-8017150:1:exon
so has part: feature:8021049-8021224:1:exon
so has part: feature:8022410-8022704:1:exon
so has part: feature:8028643-8028864:1:exon
so has part: feature:8033275-8033490:1:exon
so has part: feature:8034446-8037795:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7977778-7978389:1:exon

position:7978389:1
position: 7978389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8005563-8005692:1:exon

position:8005563:1
position: 8005563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8005692:1
position: 8005692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8010889-8010989:1:exon

position:8010889:1
position: 8010889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8010989:1
position: 8010989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8014007-8014045:1:exon

position:8014007:1
position: 8014007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8014045:1
position: 8014045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8015919-8015971:1:exon

position:8015919:1
position: 8015919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8015971:1
position: 8015971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8017024-8017150:1:exon

position:8017024:1
position: 8017024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8017150:1
position: 8017150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8021049-8021224:1:exon

position:8021049:1
position: 8021049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8021224:1
position: 8021224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8022410-8022704:1:exon

position:8022410:1
position: 8022410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8022704:1
position: 8022704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8028643-8028864:1:exon

position:8028643:1
position: 8028643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8028864:1
position: 8028864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8033275-8033490:1:exon

position:8033275:1
position: 8033275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8033490:1
position: 8033490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8034446-8037795:1:exon

position:8034446:1
position: 8034446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rprd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rprd2
product: regulation of nuclear pre-mRNA domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_033015902.1
SIO_010081: rprd2
subclass of: SO_0000673
so part of: rprd2
location: join(7978035..7978389,8005563..8005692,8010889..8010989,8014007..8014045,8015919..8015971,8017024..8017165,8021049..8021224,8022410..8022704,8028643..8028864,8033275..8033490,8034446..8037795)
location: region:7978035-8037795:1
so has part: feature:7978035-7978389:1:exon
so has part: feature:8005563-8005692:1:exon
so has part: feature:8010889-8010989:1:exon
so has part: feature:8014007-8014045:1:exon
so has part: feature:8015919-8015971:1:exon
so has part: feature:8017024-8017165:1:exon
so has part: feature:8021049-8021224:1:exon
so has part: feature:8022410-8022704:1:exon
so has part: feature:8028643-8028864:1:exon
so has part: feature:8033275-8033490:1:exon
so has part: feature:8034446-8037795:1:exon

position:7978035:1
position: 7978035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7978035-7978389:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8005563-8005692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8010889-8010989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8014007-8014045:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8015919-8015971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8017024-8017165:1:exon

position:8017165:1
position: 8017165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8021049-8021224:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8022410-8022704:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8028643-8028864:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8033275-8033490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8034446-8037795:1:exon

rprd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rprd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulation of nuclear pre-mRNA domain-containing protein 2 isoform X1
translation: MAAAVAAATASSTATTTVTTGGGGGGGGSSGFGGLEATMDKKLLAVSNTMDSIQGLSSWILDNKKHYTSIVRHWMKCMRKSSITHRLNLFYVANDVIQNCKRKNAIIFRDAFSEVLVEAGALVRDPSIRKSVDRIFTIWEQRSVYPEELIVDLRAALVGRKTTDFTKVKPVSNKTRVVVKSKILAEFRPPALIDQLGSYKQAEDEREFKEKQLGALRVDVCSTETLKRLKGTALNNRAGGKRFSKDFEESSSKLEDFCAELEREVKKTPPLIEALENAEIFYEAQYKEVKIVANAYKTFANRVNNLKKKLDQLKTTLPDPDESPIPSPCMDAPSPTGSESPVRPVEEVDPEPAKKAEESPVPPTVPEASGDNCDVEDMELSDDEAAGTTSIIAVEREEKKEESSPSVTASSPSPSPQPEKLSAQAESTQTKSSSITPPLGLPNLANIDLGKISSILSSLTTAMKNTVSPVLVQTPALAVTSAASPGVQLAVGQKTPVQKPPPLPPNPLASIRSKDELTPQSILSALSKTQGPSAAALQGLSSLLQSVTGNTSVPSSGANQSISTPTAASGTSPLDKNPPVNSTAQAAIQGLVGCSPNSPASEVSSASSVTSAPVNHSPALPNTSLKAPASGKVLDGSLRNAASSPRGSASREKAPSAQAVKTGAEAVKAEAEVRPPSPSSLELKIHNFLKVNPGFKALDLNIPLLSNLGSSDSKSLLQPSEGVRNPSSNILDNQDGTPVRDERGGTPTQDEIMDKPATTGTIDPMSLLSKLISPPSSSTSSTISPPLSMTQNMDSGYSEISNKVPSYQSDASYNRGRSSFPSSYKPSEMWEESSPHSDSPQEQFYAGESCTDFDFAGPSLSNLLKQPTKSILKSNKSGDQMQSPNEYQSISASYSRLKSAFSKPMKSILKKQEGYGSRSKGYREDDQGVDRENLPSPGQNNQFFRSESNNIILQPTFSDMSRAGPLQKAFSDSLCSTPSRPSPSPQSAASGPFSRAPAPAPAIDKAVALGSPVSATSTIEFKNMLKNASRRPADDKPAETPISPAPGAGGLGEKGNAPMFGQSGMAESTDGEQHCIETRISTSNLPENMEEKGAPIETLGSSTPSVGRVMIGEPIQTLDSSRGSGKGSMSHGRGGSRGSWFEPSESISDFDDDSSSIEVSEMTLGVPPSFRSQFEERMLQFSDTPGGYRSNSYGNPFERQTGHPPSSRHDHHGPPPVPSRDHIGHPPGPPPDHVLPQDHIGPPPVPMRDIGLPPGPPRDHMGLPPGPPPDRLGPPVPPQEHMSGSSGSLRDHGSFPGSSQDHSGEKIGPPRDHVGPPSASSVDHIAPPPDRFGPGLPPRDHLGPPPGPPVPPPGPPPLDHLGPPPGPPPRDHMGPPPIPPPGPPPREHLGPPPPGPPPGPPPRDQLVHPSQDLLGPLPGSPRDLLGPLAGPPRELLGLLPCPPRDFLSLAGRPPLQRSPRDYYGPPFGSQQDYGGSGRFLHRDFRGSFRPRETFQSGKRPALSFGSPPFATAPKRPYMPPRY
SIO_010081: rprd2
subclass of: SO_0000673
so part of: rprd2
location: join(7978149..7978389,8005563..8005692,8010889..8010989,8014007..8014045,8015919..8015971,8017024..8017165,8021049..8021224,8022410..8022704,8028643..8028864,8033275..8033490,8034446..8037399)
location: region:7978149-8037399:1
so has part: feature:7978149-7978389:1:exon
so has part: feature:8005563-8005692:1:exon
so has part: feature:8010889-8010989:1:exon
so has part: feature:8014007-8014045:1:exon
so has part: feature:8015919-8015971:1:exon
so has part: feature:8017024-8017165:1:exon
so has part: feature:8021049-8021224:1:exon
so has part: feature:8022410-8022704:1:exon
so has part: feature:8028643-8028864:1:exon
so has part: feature:8033275-8033490:1:exon
so has part: feature:8034446-8037399:1:exon

XP_032871793.1
type: Protein
SIO_000068: ncbiprotein

position:7978149:1
position: 7978149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8037399:1
position: 8037399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7978149-7978389:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8005563-8005692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8010889-8010989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8014007-8014045:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8015919-8015971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8017024-8017165:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8021049-8021224:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8022410-8022704:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8028643-8028864:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8033275-8033490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8034446-8037399:1:exon

rprd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rprd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulation of nuclear pre-mRNA domain-containing protein 2 isoform X2
translation: MAAAVAAATASSTATTTVTTGGGGGGGGSSGFGGLEATMDKKLLAVSNTMDSIQGLSSWILDNKKHYTSIVRHWMKCMRKSSITHRLNLFYVANDVIQNCKRKNAIIFRDAFSEVLVEAGALVRDPSIRKSVDRIFTIWEQRSVYPEELIVDLRAALVGRKTTDFTKVKPVSNKTRVVVKSKILAEFRPPALIDQLGSYKQAEDEREFKEKQLGALRVDVCSTETLKRLKDRAGGKRFSKDFEESSSKLEDFCAELEREVKKTPPLIEALENAEIFYEAQYKEVKIVANAYKTFANRVNNLKKKLDQLKTTLPDPDESPIPSPCMDAPSPTGSESPVRPVEEVDPEPAKKAEESPVPPTVPEASGDNCDVEDMELSDDEAAGTTSIIAVEREEKKEESSPSVTASSPSPSPQPEKLSAQAESTQTKSSSITPPLGLPNLANIDLGKISSILSSLTTAMKNTVSPVLVQTPALAVTSAASPGVQLAVGQKTPVQKPPPLPPNPLASIRSKDELTPQSILSALSKTQGPSAAALQGLSSLLQSVTGNTSVPSSGANQSISTPTAASGTSPLDKNPPVNSTAQAAIQGLVGCSPNSPASEVSSASSVTSAPVNHSPALPNTSLKAPASGKVLDGSLRNAASSPRGSASREKAPSAQAVKTGAEAVKAEAEVRPPSPSSLELKIHNFLKVNPGFKALDLNIPLLSNLGSSDSKSLLQPSEGVRNPSSNILDNQDGTPVRDERGGTPTQDEIMDKPATTGTIDPMSLLSKLISPPSSSTSSTISPPLSMTQNMDSGYSEISNKVPSYQSDASYNRGRSSFPSSYKPSEMWEESSPHSDSPQEQFYAGESCTDFDFAGPSLSNLLKQPTKSILKSNKSGDQMQSPNEYQSISASYSRLKSAFSKPMKSILKKQEGYGSRSKGYREDDQGVDRENLPSPGQNNQFFRSESNNIILQPTFSDMSRAGPLQKAFSDSLCSTPSRPSPSPQSAASGPFSRAPAPAPAIDKAVALGSPVSATSTIEFKNMLKNASRRPADDKPAETPISPAPGAGGLGEKGNAPMFGQSGMAESTDGEQHCIETRISTSNLPENMEEKGAPIETLGSSTPSVGRVMIGEPIQTLDSSRGSGKGSMSHGRGGSRGSWFEPSESISDFDDDSSSIEVSEMTLGVPPSFRSQFEERMLQFSDTPGGYRSNSYGNPFERQTGHPPSSRHDHHGPPPVPSRDHIGHPPGPPPDHVLPQDHIGPPPVPMRDIGLPPGPPRDHMGLPPGPPPDRLGPPVPPQEHMSGSSGSLRDHGSFPGSSQDHSGEKIGPPRDHVGPPSASSVDHIAPPPDRFGPGLPPRDHLGPPPGPPVPPPGPPPLDHLGPPPGPPPRDHMGPPPIPPPGPPPREHLGPPPPGPPPGPPPRDQLVHPSQDLLGPLPGSPRDLLGPLAGPPRELLGLLPCPPRDFLSLAGRPPLQRSPRDYYGPPFGSQQDYGGSGRFLHRDFRGSFRPRETFQSGKRPALSFGSPPFATAPKRPYMPPRY
SIO_010081: rprd2
subclass of: SO_0000673
so part of: rprd2
location: join(7978149..7978389,8005563..8005692,8010889..8010989,8014007..8014045,8015919..8015971,8017024..8017150,8021049..8021224,8022410..8022704,8028643..8028864,8033275..8033490,8034446..8037399)
location: region:7978149-8037399:1
so has part: feature:7978149-7978389:1:exon
so has part: feature:8005563-8005692:1:exon
so has part: feature:8010889-8010989:1:exon
so has part: feature:8014007-8014045:1:exon
so has part: feature:8015919-8015971:1:exon
so has part: feature:8017024-8017150:1:exon
so has part: feature:8021049-8021224:1:exon
so has part: feature:8022410-8022704:1:exon
so has part: feature:8028643-8028864:1:exon
so has part: feature:8033275-8033490:1:exon
so has part: feature:8034446-8037399:1:exon

XP_032871795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7978149-7978389:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8005563-8005692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8010889-8010989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8014007-8014045:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8015919-8015971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8017024-8017150:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8021049-8021224:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8022410-8022704:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8028643-8028864:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8033275-8033490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8034446-8037399:1:exon