Amblyraja radiata isolate CabotCenter1 chromosome 46, sAmbRad1.1.pri, whole genome shotgun sequence.
type: Entry
definition: Amblyraja radiata isolate CabotCenter1 chromosome 46, sAmbRad1.1.pri, whole genome shotgun sequence.
sequence version: NC_046001.1
sequence date: 2021-04-05
sequence: sequence
division: CON
label: NC_046001.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA610638
dblink: SAMN09948523
keyword: WGS
keyword: RefSeq
source: Amblyraja radiata (thorny skate)
organism: Amblyraja radiata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Amblyraja.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021411.1.\nAssembly name: sAmbRad1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/21. The original whole-genome shotgun project has the\naccession JAAGWR000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 13-JAN-2020\nAssembly Method :: Canu v. 1.7; purge_haplotigs v. bitbucket\n 7.10.2018; scaff10x v. 4.1.0; Bionano\n Solve DLS v. 3.3; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes Illumina polishing v.\n 1.3.1; purge_dups v.\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n gEVAL manual curation v. 2020-01-13; VGP\n assembly pipeline v. 1.5\nAssembly Name :: sAmbRad1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 128.24x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Amblyraja radiata Updated Annotation\n Release 100.20210331\nAnnotation Version :: 100.20210331\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 8673537
topology: linear
so has quality: SO_0000987
location: 1..8673537
location: region:1-8673537:1
RO_0002162: 386614

NC_046001
type: RefSeq
SIO_000068: refseq

PRJNA610638
type: BioProject
SIO_000068: bioproject

SAMN09948523
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8673537:1
position: 8673537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-8673537:1:source
so part of: sequence
organism: Amblyraja radiata
mol type: genomic DNA
isolate: CabotCenter1
chromosome: 46
sex: male
tissue type: testis, liver
country: USA: Gulf of Main
lat lon: 43.1336 N 68.3266 W
collection date: 2017-09-18
collected by: Jeff Kneebone

386614
type: Taxonomy
SIO_000068: taxonomy

hat1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: hat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1..39996)
location: region:1-39996:-1
so has part: feature:1-39996:-1:exon
subclass of: SO_0000010

116968857
type: Gene
SIO_000068: ncbigene

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39996:-1
position: 39996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-39996:-1:exon

hat1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hat1
product: histone acetyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 11 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033015831.1
SIO_010081: hat1
subclass of: SO_0000673
so part of: hat1
location: complement(join(1..737,4258..4374,9282..9433,11420..11526,13983..14087,15789..15910,19642..19821,29779..29899,34201..34276,34775..34846,39895..39996))
location: region:1-39996:-1
so has part: feature:39895-39996:-1:exon
so has part: feature:34775-34846:-1:exon
so has part: feature:34201-34276:-1:exon
so has part: feature:29779-29899:-1:exon
so has part: feature:19642-19821:-1:exon
so has part: feature:15789-15910:-1:exon
so has part: feature:13983-14087:-1:exon
so has part: feature:11420-11526:-1:exon
so has part: feature:9282-9433:-1:exon
so has part: feature:4258-4374:-1:exon
so has part: feature:1-737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39895-39996:-1:exon

position:39895:-1
position: 39895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34775-34846:-1:exon

position:34775:-1
position: 34775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34846:-1
position: 34846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34201-34276:-1:exon

position:34201:-1
position: 34201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34276:-1
position: 34276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:29779-29899:-1:exon

position:29779:-1
position: 29779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29899:-1
position: 29899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:19642-19821:-1:exon

position:19642:-1
position: 19642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19821:-1
position: 19821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15789-15910:-1:exon

position:15789:-1
position: 15789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15910:-1
position: 15910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13983-14087:-1:exon

position:13983:-1
position: 13983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14087:-1
position: 14087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11420-11526:-1:exon

position:11420:-1
position: 11420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11526:-1
position: 11526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9282-9433:-1:exon

position:9282:-1
position: 9282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9433:-1
position: 9433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4258-4374:-1:exon

position:4258:-1
position: 4258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4374:-1
position: 4374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1-737:-1:exon

position:737:-1
position: 737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hat1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone acetyltransferase type B catalytic subunit
translation: MANLLNLEKKLAEYKCDTNKAIRLKLVRFAEDLEDETTSFNPLYSHQVFGDEESVFGYKDLEIQLYYTTCSLTTFFNIKYARKVIEKYDNVEVDNIESKLLEYIPTGYCSSLDEFIVQLEKDASFRPFGSLIHSYTMYDDKEGLQLNYEIYKTDITCPGFKEYHERLQTFLIWFIETASYIDVDDDKWQFFLVFERYLEDGSPRFATVGYLTVYNFYAYPDKMRPRIGQMLVLPPFQGEGHGAQLMETVQRFYTTKPSILDITAEEPSEDFVKLRDFVLAKLCQELRAFAPDKLGKGFSAEMAEEARRTWKINKHHSRRVYEILRLRVTNMSDAVQSSEYRLDVKRRLAIPFKKNKKEATRLSRLMPEDWLAQQAEMSLSQEQEYLEESYQSTVEQYRHILERLARI
SIO_010081: hat1
subclass of: SO_0000673
so part of: hat1
location: complement(join(573..737,4258..4374,9282..9433,11420..11526,13983..14087,15789..15910,19642..19821,29779..29899,34201..34276,34775..34846,39895..39901))
location: region:573-39901:-1
so has part: feature:39895-39901:-1:exon
so has part: feature:34775-34846:-1:exon
so has part: feature:34201-34276:-1:exon
so has part: feature:29779-29899:-1:exon
so has part: feature:19642-19821:-1:exon
so has part: feature:15789-15910:-1:exon
so has part: feature:13983-14087:-1:exon
so has part: feature:11420-11526:-1:exon
so has part: feature:9282-9433:-1:exon
so has part: feature:4258-4374:-1:exon
so has part: feature:573-737:-1:exon

XP_032871722.1
type: Protein
SIO_000068: ncbiprotein

position:573:-1
position: 573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39901:-1
position: 39901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39895-39901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34775-34846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34201-34276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29779-29899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19642-19821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15789-15910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13983-14087:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11420-11526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9282-9433:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4258-4374:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:573-737:-1:exon

LOC116968858
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 45636..55535
location: region:45636-55535:1
so has part: feature:45636-55535:1:exon
subclass of: SO_0000010

116968858
type: Gene
SIO_000068: ncbigene

position:45636:1
position: 45636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55535:1
position: 55535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45636-55535:1:exon

LOC116968858
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968858
product: myosin light polypeptide 6-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 104 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033015833.1
SIO_010081: LOC116968858
subclass of: SO_0000673
so part of: LOC116968858
location: join(45636..45755,45851..45878,48870..49013,50040..50213,51693..51770,54086..54128,55083..55535)
location: region:45636-55535:1
so has part: feature:45636-45755:1:exon
so has part: feature:45851-45878:1:exon
so has part: feature:48870-49013:1:exon
so has part: feature:50040-50213:1:exon
so has part: feature:51693-51770:1:exon
so has part: feature:54086-54128:1:exon
so has part: feature:55083-55535:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45636-45755:1:exon

position:45755:1
position: 45755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:45851-45878:1:exon

position:45851:1
position: 45851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45878:1
position: 45878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48870-49013:1:exon

position:48870:1
position: 48870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49013:1
position: 49013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:50040-50213:1:exon

position:50040:1
position: 50040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50213:1
position: 50213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51693-51770:1:exon

position:51693:1
position: 51693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51770:1
position: 51770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:54086-54128:1:exon

position:54086:1
position: 54086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54128:1
position: 54128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:55083-55535:1:exon

position:55083:1
position: 55083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968858
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968858
product: myosin light polypeptide 6-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 104 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033015834.1
SIO_010081: LOC116968858
subclass of: SO_0000673
so part of: LOC116968858
location: join(45636..45755,45851..45878,48870..49013,50040..50213,51693..51770,54086..54117,55083..55535)
location: region:45636-55535:1
so has part: feature:45636-45755:1:exon
so has part: feature:45851-45878:1:exon
so has part: feature:48870-49013:1:exon
so has part: feature:50040-50213:1:exon
so has part: feature:51693-51770:1:exon
so has part: feature:54086-54117:1:exon
so has part: feature:55083-55535:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45636-45755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45851-45878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48870-49013:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50040-50213:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51693-51770:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:54086-54117:1:exon

position:54117:1
position: 54117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:55083-55535:1:exon

LOC116968858
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968858
product: myosin light polypeptide 6-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033015832.1
SIO_010081: LOC116968858
subclass of: SO_0000673
so part of: LOC116968858
location: join(45638..45755,45851..45878,48870..49013,50040..50213,51693..51770,55083..55535)
location: region:45638-55535:1
so has part: feature:45638-45755:1:exon
so has part: feature:45851-45878:1:exon
so has part: feature:48870-49013:1:exon
so has part: feature:50040-50213:1:exon
so has part: feature:51693-51770:1:exon
so has part: feature:55083-55535:1:exon

position:45638:1
position: 45638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45638-45755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45851-45878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48870-49013:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50040-50213:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51693-51770:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:55083-55535:1:exon

LOC116968858
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light polypeptide 6-like isoform X1
translation: MCDFTEDQIAEFKEAFCLYDRIGEGRIGFGQFADLLRALGQNPCNAEVLKVLGNPKPEDMNMKTLDFEQFLPKLQDIARNKEPGTFEDFVEGLRVFDKEGNGTVMGAELRHVLVTLGEKMTEEEVETLLAGHEDANGCINYEELVRMVMSG
SIO_010081: LOC116968858
subclass of: SO_0000673
so part of: LOC116968858
location: join(45753..45755,45851..45878,48870..49013,50040..50213,51693..51770,55083..55111)
location: region:45753-55111:1
so has part: feature:45753-45755:1:exon
so has part: feature:45851-45878:1:exon
so has part: feature:48870-49013:1:exon
so has part: feature:50040-50213:1:exon
so has part: feature:51693-51770:1:exon
so has part: feature:55083-55111:1:exon

XP_032871723.1
type: Protein
SIO_000068: ncbiprotein

position:45753:1
position: 45753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55111:1
position: 55111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45753-45755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45851-45878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48870-49013:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50040-50213:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51693-51770:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:55083-55111:1:exon

LOC116968858
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light polypeptide 6-like isoform X2
translation: MCDFTEDQIAEFKEAFCLYDRIGEGRIGFGQFADLLRALGQNPCNAEVLKVLGNPKPEDMNMKTLDFEQFLPKLQDIARNKEPGTFEDFVEGLRVFDKEGNGTVMGAELRHVLVTLGEKMTEEEVETLLAGHEDANGCINYEAFVRHIMSG
SIO_010081: LOC116968858
subclass of: SO_0000673
so part of: LOC116968858
location: join(45753..45755,45851..45878,48870..49013,50040..50213,51693..51770,54086..54114)
location: region:45753-54114:1
so has part: feature:45753-45755:1:exon
so has part: feature:45851-45878:1:exon
so has part: feature:48870-49013:1:exon
so has part: feature:50040-50213:1:exon
so has part: feature:51693-51770:1:exon
so has part: feature:54086-54114:1:exon

XP_032871724.1
type: Protein
SIO_000068: ncbiprotein

position:54114:1
position: 54114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45753-45755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45851-45878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48870-49013:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50040-50213:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51693-51770:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:54086-54114:1:exon

LOC116968858
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light polypeptide 6-like isoform X2
translation: MCDFTEDQIAEFKEAFCLYDRIGEGRIGFGQFADLLRALGQNPCNAEVLKVLGNPKPEDMNMKTLDFEQFLPKLQDIARNKEPGTFEDFVEGLRVFDKEGNGTVMGAELRHVLVTLGEKMTEEEVETLLAGHEDANGCINYEAFVRHIMSG
SIO_010081: LOC116968858
subclass of: SO_0000673
so part of: LOC116968858
location: join(45753..45755,45851..45878,48870..49013,50040..50213,51693..51770,54086..54114)
location: region:45753-54114:1
so has part: feature:45753-45755:1:exon
so has part: feature:45851-45878:1:exon
so has part: feature:48870-49013:1:exon
so has part: feature:50040-50213:1:exon
so has part: feature:51693-51770:1:exon
so has part: feature:54086-54114:1:exon

XP_032871725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45753-45755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45851-45878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48870-49013:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50040-50213:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51693-51770:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:54086-54114:1:exon

smarcc2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: smarcc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(62325..127683)
location: region:62325-127683:-1
so has part: feature:62325-127683:-1:exon
subclass of: SO_0000010

116968800
type: Gene
SIO_000068: ncbigene

position:62325:-1
position: 62325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127683:-1
position: 127683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62325-127683:-1:exon

smarcc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: smarcc2
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033015686.1
SIO_010081: smarcc2
subclass of: SO_0000673
so part of: smarcc2
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:113880-113972:-1:exon

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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:108952-109027:-1:exon

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urn:…
SIO_000300: 9
SIO_000628: feature:105903-106034:-1:exon

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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
SIO_000628: feature:94361-94485:-1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:87658-87717:-1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:86172-86209:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:83750-83880:-1:exon

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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:81013-81126:-1:exon

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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:78100-78213:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:77925-77987:-1:exon

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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:74608-74769:-1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:72941-73002:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:72222-72345:-1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:69635-69801:-1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:69128-69262:-1:exon

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reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:68623-69019:-1:exon

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position:69019:-1
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urn:…
SIO_000300: 27
SIO_000628: feature:66119-66526:-1:exon

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reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:62325-64710:-1:exon

position:64710:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

smarcc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: smarcc2
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033015684.1
SIO_010081: smarcc2
subclass of: SO_0000673
so part of: smarcc2
location: complement(join(62325..64710,66119..66526,68623..69019,69128..69262,69635..69801,72222..72360,72941..73002,74608..74769,75789..76047,77925..77987,78100..78213,79107..79260,81013..81126,81848..81919,83750..83880,86172..86209,87658..87717,94361..94485,104695..104810,105903..106034,108952..109027,110832..110901,111681..111750,113880..113972,114862..114943,115255..115340,121794..121913,127540..127683))
location: region:62325-127683:-1
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so has part: feature:121794-121913:-1:exon
so has part: feature:115255-115340:-1:exon
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so has part: feature:113880-113972:-1:exon
so has part: feature:111681-111750:-1:exon
so has part: feature:110832-110901:-1:exon
so has part: feature:108952-109027:-1:exon
so has part: feature:105903-106034:-1:exon
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so has part: feature:87658-87717:-1:exon
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so has part: feature:68623-69019:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:127540-127683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121794-121913:-1:exon

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SIO_000300: 3
SIO_000628: feature:115255-115340:-1:exon

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SIO_000300: 7
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SIO_000628: feature:105903-106034:-1:exon

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SIO_000300: 10
SIO_000628: feature:104695-104810:-1:exon

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SIO_000300: 11
SIO_000628: feature:94361-94485:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87658-87717:-1:exon

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SIO_000300: 13
SIO_000628: feature:86172-86209:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83750-83880:-1:exon

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SIO_000300: 15
SIO_000628: feature:81848-81919:-1:exon

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SIO_000300: 16
SIO_000628: feature:81013-81126:-1:exon

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SIO_000628: feature:79107-79260:-1:exon

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SIO_000300: 22
SIO_000628: feature:72941-73002:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:72222-72360:-1:exon

position:72360:-1
position: 72360
reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:69635-69801:-1:exon

urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
SIO_000628: feature:68623-69019:-1:exon

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SIO_000300: 27
SIO_000628: feature:66119-66526:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:62325-64710:-1:exon

smarcc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: smarcc2
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_033015685.1
SIO_010081: smarcc2
subclass of: SO_0000673
so part of: smarcc2
location: complement(join(62325..64710,66119..66526,68623..69019,69128..69262,69635..69801,72222..72345,72941..73002,74608..74769,75789..76047,77925..77987,78100..78213,79107..79260,81013..81126,81848..81919,83750..83880,86172..86209,87658..87717,94361..94491,104695..104810,105903..106034,108952..109027,110832..110901,111681..111750,113880..113972,114862..114943,115255..115340,121794..121913,127540..127683))
location: region:62325-127683:-1
so has part: feature:127540-127683:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:127540-127683:-1:exon

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SIO_000300: 2
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reference: sequence
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 23
SIO_000628: feature:72222-72345:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:69635-69801:-1:exon

urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
SIO_000628: feature:68623-69019:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:66119-66526:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:62325-64710:-1:exon

smarcc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: smarcc2
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033015682.1
SIO_010081: smarcc2
subclass of: SO_0000673
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type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: smarcc2
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note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015687.1
SIO_010081: smarcc2
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smarcc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: smarcc2
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015690.1
SIO_010081: smarcc2
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type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: smarcc2
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033015689.1
SIO_010081: smarcc2
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smarcc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: smarcc2
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033015688.1
SIO_010081: smarcc2
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so has part: feature:104695-104810:-1:exon
so has part: feature:94361-94491:-1:exon
so has part: feature:87658-87717:-1:exon
so has part: feature:86172-86209:-1:exon
so has part: feature:83750-83880:-1:exon
so has part: feature:81848-81919:-1:exon
so has part: feature:81013-81126:-1:exon
so has part: feature:79107-79260:-1:exon
so has part: feature:78100-78213:-1:exon
so has part: feature:77925-77987:-1:exon
so has part: feature:75789-76047:-1:exon
so has part: feature:74608-74769:-1:exon
so has part: feature:72941-73002:-1:exon
so has part: feature:72222-72360:-1:exon
so has part: feature:69635-69801:-1:exon
so has part: feature:69128-69262:-1:exon
so has part: feature:68623-69019:-1:exon
so has part: feature:66443-66526:-1:exon
so has part: feature:66119-66214:-1:exon
so has part: feature:62325-64710:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127540-127683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121794-121913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115255-115340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114862-114943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113880-113972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111681-111750:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110832-110901:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108952-109027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105903-106034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104695-104810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94361-94491:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87658-87717:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:86172-86209:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83750-83880:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81848-81919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81013-81126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79107-79260:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78100-78213:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77925-77987:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75789-76047:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74608-74769:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:72941-73002:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:72222-72360:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:69635-69801:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:69128-69262:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:68623-69019:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:66443-66526:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:66119-66214:-1:exon

position:66214:-1
position: 66214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:62325-64710:-1:exon

smarcc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: smarcc2
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033015681.1
SIO_010081: smarcc2
subclass of: SO_0000673
so part of: smarcc2
location: complement(join(62325..64710,66119..66526,68623..69019,69128..69262,69635..69801,72222..72360,72941..73002,74608..74769,75789..76047,77925..77987,78100..78213,79107..79260,81013..81126,81848..81919,83750..83880,86172..86209,87658..87717,94361..94491,104695..104810,105903..106034,108952..109027,110832..110901,111681..111750,113880..113972,114862..114943,115255..115340,121794..121913,127540..127683))
location: region:62325-127683:-1
so has part: feature:127540-127683:-1:exon
so has part: feature:121794-121913:-1:exon
so has part: feature:115255-115340:-1:exon
so has part: feature:114862-114943:-1:exon
so has part: feature:113880-113972:-1:exon
so has part: feature:111681-111750:-1:exon
so has part: feature:110832-110901:-1:exon
so has part: feature:108952-109027:-1:exon
so has part: feature:105903-106034:-1:exon
so has part: feature:104695-104810:-1:exon
so has part: feature:94361-94491:-1:exon
so has part: feature:87658-87717:-1:exon
so has part: feature:86172-86209:-1:exon
so has part: feature:83750-83880:-1:exon
so has part: feature:81848-81919:-1:exon
so has part: feature:81013-81126:-1:exon
so has part: feature:79107-79260:-1:exon
so has part: feature:78100-78213:-1:exon
so has part: feature:77925-77987:-1:exon
so has part: feature:75789-76047:-1:exon
so has part: feature:74608-74769:-1:exon
so has part: feature:72941-73002:-1:exon
so has part: feature:72222-72360:-1:exon
so has part: feature:69635-69801:-1:exon
so has part: feature:69128-69262:-1:exon
so has part: feature:68623-69019:-1:exon
so has part: feature:66119-66526:-1:exon
so has part: feature:62325-64710:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127540-127683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121794-121913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115255-115340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114862-114943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113880-113972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111681-111750:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110832-110901:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108952-109027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105903-106034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104695-104810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94361-94491:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87658-87717:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:86172-86209:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83750-83880:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81848-81919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81013-81126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79107-79260:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78100-78213:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77925-77987:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75789-76047:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74608-74769:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:72941-73002:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:72222-72360:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:69635-69801:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:69128-69262:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:68623-69019:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:66119-66526:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:62325-64710:-1:exon

smarcc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: smarcc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF complex subunit SMARCC2 isoform X5
translation: MAVRKKDGGPNVKYFESSDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPMKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKTLVQNHCLSRPNIYLNSEIEPKLLSKLKDIIKRHQGTVTEDKSNASHIVYPIPGSLEDEEWVRPIMKREKQVLLHWGYCPDSYDTWIAASEIEAAVEDPPPTERPRKVHAKWIMDTDTFNEWMNEEDYEVNDDRSPVVRRKRISAKTLTEEVHSPDSDRRDKKGSAHKKRKRSPSPSPTPDPKKKNTKKGPATPYAKSKRGHREEDQEDLTKDMDEPSPVPNVEEVTLPKSVNTKKDSESAPVKGGTMTDLDEQEDDSLETTGKDEEDVSTGNKGEQTKNSELHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKAPQTSASQQMLNFPDKNKEKAPDMQNFGLRTDMYAKKNIPKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAFQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPSALVEAHVKKVEDAAKVTGKADPTFGLESSGIAGTTQDEPEKSEEGSDEMKSDAQSADDKKESKDKEIAGEDENKEKQPDTSKKEEDKGKECEPDKENEKAEVEVADTEREKENKEFQDEGAKKDGESEADKKTKLERDVGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLSDRQAFHMEQLKYAEMRARQQHFQQMHQQQQQQHQLPSGPQASQQPAVIPASVQPVPPAAIQQGTLSQASGDSIAQSIPQPQQTPPTQPPPPQQQQQQQQQQQQQQQQQQQQQQQAQPPVLPHSQPPFPGQQTPNQLMPSNMPVGMPTNMSGNMAAGIPCVVPANVACSMGSAITENIPVNLPTCMPNPVHDNMSSSMSAVVPDNIGTGLPGNVPVDLPDSLHPNIPGNINTGSMSLTSTPGSAAAQSPAIVAATSPLAEQGASMQTEVMTTPAAPVPPSQ
SIO_010081: smarcc2
subclass of: SO_0000673
so part of: smarcc2
location: complement(join(64643..64710,66119..66526,68623..69019,69128..69262,69635..69801,72222..72345,72941..73002,74608..74769,75789..76047,77925..77987,78100..78213,79107..79260,81013..81126,81848..81919,83750..83880,86172..86209,87658..87717,94361..94485,104695..104810,105903..106034,108952..109027,110832..110901,111681..111750,113880..113972,114862..114943,115255..115340,121794..121913,127540..127650))
location: region:64643-127650:-1
so has part: feature:127540-127650:-1:exon
so has part: feature:121794-121913:-1:exon
so has part: feature:115255-115340:-1:exon
so has part: feature:114862-114943:-1:exon
so has part: feature:113880-113972:-1:exon
so has part: feature:111681-111750:-1:exon
so has part: feature:110832-110901:-1:exon
so has part: feature:108952-109027:-1:exon
so has part: feature:105903-106034:-1:exon
so has part: feature:104695-104810:-1:exon
so has part: feature:94361-94485:-1:exon
so has part: feature:87658-87717:-1:exon
so has part: feature:86172-86209:-1:exon
so has part: feature:83750-83880:-1:exon
so has part: feature:81848-81919:-1:exon
so has part: feature:81013-81126:-1:exon
so has part: feature:79107-79260:-1:exon
so has part: feature:78100-78213:-1:exon
so has part: feature:77925-77987:-1:exon
so has part: feature:75789-76047:-1:exon
so has part: feature:74608-74769:-1:exon
so has part: feature:72941-73002:-1:exon
so has part: feature:72222-72345:-1:exon
so has part: feature:69635-69801:-1:exon
so has part: feature:69128-69262:-1:exon
so has part: feature:68623-69019:-1:exon
so has part: feature:66119-66526:-1:exon
so has part: feature:64643-64710:-1:exon

XP_032871577.1
type: Protein
SIO_000068: ncbiprotein

position:64643:-1
position: 64643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127650:-1
position: 127650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127540-127650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121794-121913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115255-115340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114862-114943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113880-113972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111681-111750:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110832-110901:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108952-109027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105903-106034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104695-104810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94361-94485:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87658-87717:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:86172-86209:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83750-83880:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81848-81919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81013-81126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79107-79260:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78100-78213:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77925-77987:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75789-76047:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74608-74769:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:72941-73002:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:72222-72345:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:69635-69801:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:69128-69262:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:68623-69019:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:66119-66526:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:64643-64710:-1:exon

smarcc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: smarcc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF complex subunit SMARCC2 isoform X3
translation: MAVRKKDGGPNVKYFESSDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPMKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKTLVQNHCLSRPNIYLNSEIEPKLLSKLKDIIKRHQGTVTEDKSNASHIVYPIPGSLEDEEWVRPIMKREKQVLLHWGYCPDSYDTWIAASEIEAAVEDPPPTERPRKVHAKWIMDTDTFNEWMNEEDYEVNDDRSPVVRRKRISAKTLTEEVHSPDSDRRDKKGSAHKKRKRSPSPSPTPDPKKKNTKKGPATPYAKSKRGHREEDQEDLTKDMDEPSPVPNVEEVTLPKSVNTKKDSESAPVKGGTMTDLDEQEDDSLETTGKDEEDVSTGNKGEQTKNSELHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKAPQTSASQQMLNFPDKNKEKAPDMQNFGLRTDMYAKKNIPKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAFQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPSALVEAHVKKVEDAAKVTGKADPTFGLESSGIAGTTQDEPEKSEEGSDEMKSDAQSADDKKESKLVCSKDKEIAGEDENKEKQPDTSKKEEDKGKECEPDKENEKAEVEVADTEREKENKEFQDEGAKKDGESEADKKTKLERDVGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLSDRQAFHMEQLKYAEMRARQQHFQQMHQQQQQQHQLPSGPQASQQPAVIPASVQPVPPAAIQQGTLSQASGDSIAQSIPQPQQTPPTQPPPPQQQQQQQQQQQQQQQQQQQQQQQAQPPVLPHSQPPFPGQQTPNQLMPSNMPVGMPTNMSGNMAAGIPCVVPANVACSMGSAITENIPVNLPTCMPNPVHDNMSSSMSAVVPDNIGTGLPGNVPVDLPDSLHPNIPGNINTGSMSLTSTPGSAAAQSPAIVAATSPLAEQGASMQTEVMTTPAAPVPPSQ
SIO_010081: smarcc2
subclass of: SO_0000673
so part of: smarcc2
location: complement(join(64643..64710,66119..66526,68623..69019,69128..69262,69635..69801,72222..72360,72941..73002,74608..74769,75789..76047,77925..77987,78100..78213,79107..79260,81013..81126,81848..81919,83750..83880,86172..86209,87658..87717,94361..94485,104695..104810,105903..106034,108952..109027,110832..110901,111681..111750,113880..113972,114862..114943,115255..115340,121794..121913,127540..127650))
location: region:64643-127650:-1
so has part: feature:127540-127650:-1:exon
so has part: feature:121794-121913:-1:exon
so has part: feature:115255-115340:-1:exon
so has part: feature:114862-114943:-1:exon
so has part: feature:113880-113972:-1:exon
so has part: feature:111681-111750:-1:exon
so has part: feature:110832-110901:-1:exon
so has part: feature:108952-109027:-1:exon
so has part: feature:105903-106034:-1:exon
so has part: feature:104695-104810:-1:exon
so has part: feature:94361-94485:-1:exon
so has part: feature:87658-87717:-1:exon
so has part: feature:86172-86209:-1:exon
so has part: feature:83750-83880:-1:exon
so has part: feature:81848-81919:-1:exon
so has part: feature:81013-81126:-1:exon
so has part: feature:79107-79260:-1:exon
so has part: feature:78100-78213:-1:exon
so has part: feature:77925-77987:-1:exon
so has part: feature:75789-76047:-1:exon
so has part: feature:74608-74769:-1:exon
so has part: feature:72941-73002:-1:exon
so has part: feature:72222-72360:-1:exon
so has part: feature:69635-69801:-1:exon
so has part: feature:69128-69262:-1:exon
so has part: feature:68623-69019:-1:exon
so has part: feature:66119-66526:-1:exon
so has part: feature:64643-64710:-1:exon

XP_032871575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127540-127650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121794-121913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115255-115340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114862-114943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113880-113972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111681-111750:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110832-110901:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108952-109027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105903-106034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104695-104810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94361-94485:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87658-87717:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:86172-86209:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83750-83880:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81848-81919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81013-81126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79107-79260:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78100-78213:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77925-77987:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75789-76047:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74608-74769:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:72941-73002:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:72222-72360:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:69635-69801:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:69128-69262:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:68623-69019:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:66119-66526:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:64643-64710:-1:exon

smarcc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: smarcc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF complex subunit SMARCC2 isoform X4
translation: MAVRKKDGGPNVKYFESSDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPMKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKTLVQNHCLSRPNIYLNSEIEPKLLSKLKDIIKRHQGTVTEDKSNASHIVYPIPGSLEDEEWVRPIMKREKQVLLHWGYCPDSYDTWIAASEIEAAVEDPPPTERPRKVHAKWIMDTDTFNEWMNEEDYEVNDDRSPVVRRKRISAKTLTEEVHSPDSDRRDKKGSAHKKRKRSPSPSPTPDPKKKNTKKGRSPATPYAKSKRGHREEDQEDLTKDMDEPSPVPNVEEVTLPKSVNTKKDSESAPVKGGTMTDLDEQEDDSLETTGKDEEDVSTGNKGEQTKNSELHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKAPQTSASQQMLNFPDKNKEKAPDMQNFGLRTDMYAKKNIPKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAFQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPSALVEAHVKKVEDAAKVTGKADPTFGLESSGIAGTTQDEPEKSEEGSDEMKSDAQSADDKKESKDKEIAGEDENKEKQPDTSKKEEDKGKECEPDKENEKAEVEVADTEREKENKEFQDEGAKKDGESEADKKTKLERDVGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLSDRQAFHMEQLKYAEMRARQQHFQQMHQQQQQQHQLPSGPQASQQPAVIPASVQPVPPAAIQQGTLSQASGDSIAQSIPQPQQTPPTQPPPPQQQQQQQQQQQQQQQQQQQQQQQAQPPVLPHSQPPFPGQQTPNQLMPSNMPVGMPTNMSGNMAAGIPCVVPANVACSMGSAITENIPVNLPTCMPNPVHDNMSSSMSAVVPDNIGTGLPGNVPVDLPDSLHPNIPGNINTGSMSLTSTPGSAAAQSPAIVAATSPLAEQGASMQTEVMTTPAAPVPPSQ
SIO_010081: smarcc2
subclass of: SO_0000673
so part of: smarcc2
location: complement(join(64643..64710,66119..66526,68623..69019,69128..69262,69635..69801,72222..72345,72941..73002,74608..74769,75789..76047,77925..77987,78100..78213,79107..79260,81013..81126,81848..81919,83750..83880,86172..86209,87658..87717,94361..94491,104695..104810,105903..106034,108952..109027,110832..110901,111681..111750,113880..113972,114862..114943,115255..115340,121794..121913,127540..127650))
location: region:64643-127650:-1
so has part: feature:127540-127650:-1:exon
so has part: feature:121794-121913:-1:exon
so has part: feature:115255-115340:-1:exon
so has part: feature:114862-114943:-1:exon
so has part: feature:113880-113972:-1:exon
so has part: feature:111681-111750:-1:exon
so has part: feature:110832-110901:-1:exon
so has part: feature:108952-109027:-1:exon
so has part: feature:105903-106034:-1:exon
so has part: feature:104695-104810:-1:exon
so has part: feature:94361-94491:-1:exon
so has part: feature:87658-87717:-1:exon
so has part: feature:86172-86209:-1:exon
so has part: feature:83750-83880:-1:exon
so has part: feature:81848-81919:-1:exon
so has part: feature:81013-81126:-1:exon
so has part: feature:79107-79260:-1:exon
so has part: feature:78100-78213:-1:exon
so has part: feature:77925-77987:-1:exon
so has part: feature:75789-76047:-1:exon
so has part: feature:74608-74769:-1:exon
so has part: feature:72941-73002:-1:exon
so has part: feature:72222-72345:-1:exon
so has part: feature:69635-69801:-1:exon
so has part: feature:69128-69262:-1:exon
so has part: feature:68623-69019:-1:exon
so has part: feature:66119-66526:-1:exon
so has part: feature:64643-64710:-1:exon

XP_032871576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127540-127650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121794-121913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115255-115340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114862-114943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113880-113972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111681-111750:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110832-110901:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108952-109027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105903-106034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104695-104810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94361-94491:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87658-87717:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:86172-86209:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83750-83880:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81848-81919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81013-81126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79107-79260:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78100-78213:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77925-77987:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75789-76047:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74608-74769:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:72941-73002:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:72222-72345:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:69635-69801:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:69128-69262:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:68623-69019:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:66119-66526:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:64643-64710:-1:exon

smarcc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: smarcc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF complex subunit SMARCC2 isoform X2
translation: MAVRKKDGGPNVKYFESSDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPMKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKTLVQNHCLSRPNIYLNSEIEPKLLSKLKDIIKRHQGTVTEDKSNASHIVYPIPGSLEDEEWVRPIMKREKQVLLHWGYCPDSYDTWIAASEIEAAVEDPPPTERPRKVHAKWIMDTDTFNEWMNEEDYEVNDDRSPVVRRKRISAKTLTEEVHSPDSDRRDKKGSAHKKRKRSPSPSPTPDPKKKNTKKGRSPATPYAKSKRGHREEDQEDLTKDMDEPSPVPNVEEVTLPKSVNTKKDSESAPVKGGTMTDLDEQEDDSLETTGKDEEDVSTGNKGEQTKNSELHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKAPQTSASQQMLNFPDKNKEKAPDMQNFGLRTDMYAKKNIPKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAFQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPSALVEAHVKKVEDAAKVTGKADPTFGLESSGIAGTTQDEPEKSEEGSDEMKSDAQSADDKKESKLVCSKDKEIAGEDENKEKQPDTSKKEEDKGKECEPDKENEKAEVEVDTEREKENKEFQDEGAKKDGESEADKKTKLERDVGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLSDRQAFHMEQLKYAEMRARQQHFQQMHQQQQQQHQLPSGPQASQQPAVIPASVQPVPPAAIQQGTLSQASGDSIAQSIPQPQQTPPTQPPPPQQQQQQQQQQQQQQQQQQQQQQQAQPPVLPHSQPPFPGQQTPNQLMPSNMPVGMPTNMSGNMAAGIPCVVPANVACSMGSAITENIPVNLPTCMPNPVHDNMSSSMSAVVPDNIGTGLPGNVPVDLPDSLHPNIPGNINTGSMSLTSTPGSAAAQSPAIVAATSPLAEQGASMQTEVMTTPAAPVPPSQ
SIO_010081: smarcc2
subclass of: SO_0000673
so part of: smarcc2
location: complement(join(64643..64710,66119..66526,68623..69019,69128..69262,69635..69798,72222..72360,72941..73002,74608..74769,75789..76047,77925..77987,78100..78213,79107..79260,81013..81126,81848..81919,83750..83880,86172..86209,87658..87717,94361..94491,104695..104810,105903..106034,108952..109027,110832..110901,111681..111750,113880..113972,114862..114943,115255..115340,121794..121913,127540..127650))
location: region:64643-127650:-1
so has part: feature:127540-127650:-1:exon
so has part: feature:121794-121913:-1:exon
so has part: feature:115255-115340:-1:exon
so has part: feature:114862-114943:-1:exon
so has part: feature:113880-113972:-1:exon
so has part: feature:111681-111750:-1:exon
so has part: feature:110832-110901:-1:exon
so has part: feature:108952-109027:-1:exon
so has part: feature:105903-106034:-1:exon
so has part: feature:104695-104810:-1:exon
so has part: feature:94361-94491:-1:exon
so has part: feature:87658-87717:-1:exon
so has part: feature:86172-86209:-1:exon
so has part: feature:83750-83880:-1:exon
so has part: feature:81848-81919:-1:exon
so has part: feature:81013-81126:-1:exon
so has part: feature:79107-79260:-1:exon
so has part: feature:78100-78213:-1:exon
so has part: feature:77925-77987:-1:exon
so has part: feature:75789-76047:-1:exon
so has part: feature:74608-74769:-1:exon
so has part: feature:72941-73002:-1:exon
so has part: feature:72222-72360:-1:exon
so has part: feature:69635-69798:-1:exon
so has part: feature:69128-69262:-1:exon
so has part: feature:68623-69019:-1:exon
so has part: feature:66119-66526:-1:exon
so has part: feature:64643-64710:-1:exon

XP_032871573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127540-127650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121794-121913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115255-115340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114862-114943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113880-113972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111681-111750:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110832-110901:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108952-109027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105903-106034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104695-104810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94361-94491:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87658-87717:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:86172-86209:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83750-83880:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81848-81919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81013-81126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79107-79260:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78100-78213:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77925-77987:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75789-76047:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74608-74769:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:72941-73002:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:72222-72360:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:69635-69798:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:69128-69262:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:68623-69019:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:66119-66526:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:64643-64710:-1:exon

smarcc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: smarcc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF complex subunit SMARCC2 isoform X6
translation: MAVRKKDGGPNVKYFESSDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPMKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKTLVQNHCLSRPNIYLNSEIEPKLLSKLKDIIKRHQGTVTEDKSNASHIVYPIPGSLEDEEWVRPIMKREKQVLLHWGYCPDSYDTWIAASEIEAAVEDPPPTERPRKVHAKWIMDTDTFNEWMNEEDYEVNDDRSPVVRRKRISAKTLTEEVHSPDSDRRDKKGSAHKKRKRSPSPSPTPDPKKKNTKKGRSPATPYAKSKRGHREEDQEDLTKDMDEPSPVPNVEEVTLPKSVNTKKDSESAPVKGGTMTDLDEQEDDSLETTGKDEEDVSTGNKGEQTKNSELHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKAPQTSASQQMLNFPDKNKEKAPDMQNFGLRTDMYAKKNIPKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAFQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPSALVEAHVKKVEDAAKVTGKADPTFGLESSGIAGTTQDEPEKSEEGSDEMKSDAQSADDKKESKLVCSKDKEIAGEDENKEKQPDTSKKEEDKGKECEPDKENEKAEVEVADTEREKENKEFQDEGAKKDGESEADKKTKLERDVGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLSDRQAFHMEQLKYAEMRARQQHFQQMHQQQQQQHQLPSGPQASQQPAVIPASVQPVPPAAIQQGTLSQASGDSIAQSIPQPQQTPPTQPPQQQQQQQQQQQQAQPPVLPHSQPPFPGQQTPNQLMPSNMPVGMPTNMSGNMAAGIPCVVPANVACSMGSAITENIPVNLPTCMPNPVHDNMSSSMSAVVPDNIGTGLPGNVPVDLPDSLHPNIPGNINTGSMSLTSTPGSAAAQSPAIVAATSPLAEQGASMQTEVMTTPAAPVPPSQ
SIO_010081: smarcc2
subclass of: SO_0000673
so part of: smarcc2
location: complement(join(64643..64710,66119..66526,68623..68684,68724..69019,69128..69262,69635..69801,72222..72360,72941..73002,74608..74769,75789..76047,77925..77987,78100..78213,79107..79260,81013..81126,81848..81919,83750..83880,86172..86209,87658..87717,94361..94491,104695..104810,105903..106034,108952..109027,110832..110901,111681..111750,113880..113972,114862..114943,115255..115340,121794..121913,127540..127650))
location: region:64643-127650:-1
so has part: feature:127540-127650:-1:exon
so has part: feature:121794-121913:-1:exon
so has part: feature:115255-115340:-1:exon
so has part: feature:114862-114943:-1:exon
so has part: feature:113880-113972:-1:exon
so has part: feature:111681-111750:-1:exon
so has part: feature:110832-110901:-1:exon
so has part: feature:108952-109027:-1:exon
so has part: feature:105903-106034:-1:exon
so has part: feature:104695-104810:-1:exon
so has part: feature:94361-94491:-1:exon
so has part: feature:87658-87717:-1:exon
so has part: feature:86172-86209:-1:exon
so has part: feature:83750-83880:-1:exon
so has part: feature:81848-81919:-1:exon
so has part: feature:81013-81126:-1:exon
so has part: feature:79107-79260:-1:exon
so has part: feature:78100-78213:-1:exon
so has part: feature:77925-77987:-1:exon
so has part: feature:75789-76047:-1:exon
so has part: feature:74608-74769:-1:exon
so has part: feature:72941-73002:-1:exon
so has part: feature:72222-72360:-1:exon
so has part: feature:69635-69801:-1:exon
so has part: feature:69128-69262:-1:exon
so has part: feature:68724-69019:-1:exon
so has part: feature:68623-68684:-1:exon
so has part: feature:66119-66526:-1:exon
so has part: feature:64643-64710:-1:exon

XP_032871578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127540-127650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121794-121913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115255-115340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114862-114943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113880-113972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111681-111750:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110832-110901:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108952-109027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105903-106034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104695-104810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94361-94491:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87658-87717:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:86172-86209:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83750-83880:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81848-81919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81013-81126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79107-79260:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78100-78213:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77925-77987:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75789-76047:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74608-74769:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:72941-73002:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:72222-72360:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:69635-69801:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:69128-69262:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:68724-69019:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:68623-68684:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:66119-66526:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:64643-64710:-1:exon

smarcc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: smarcc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF complex subunit SMARCC2 isoform X9
translation: MAVRKKDGGPNVKYFESSDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPMKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKTLVQNHCLSRPNIYLNSEIEPKLLSKLKDIIKRHQGTVTEDKSNASHIVYPIPGSLEDEEWVRPIMKREKQVLLHWGYCPDSYDTWIAASEIEAAVEDPPPTERPRKVHAKWIMDTDTFNEWMNEEDYEVNDDRSPVVRRKRISAKTLTEEVHSPDSDRRDKKGSAHKKRKRSPSPSPTPDPKKKNTKKGRSPATPYAKSKRGHREEDQEDLTKDMDEPSPVPNVEEVTLPKSVNTKKDSESAPVKGGTMTDLDEQEDDSLETTGKDEEDVSTGNKGEQTKNSELHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKAPQTSASQQMLNFPDKNKEKAPDMQNFGLRTDMYAKKNIPKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAFQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPSALVEAHVKKVEDAAKVTGKADPTFGLESSGIAGTTQDEPEKSEEGSDEMKSDAQSADDKKESKLVCSKDKEIAGEDENKEKQPDTSKKEEDKGKECEPDKENEKAEVEVADTEREKENKEFQDEGAKKDGESEADKKTKLERDVGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLSDRQAFHMEQLKYAEMRARQQHFQQMHQQQQQQHQLPSGPQASQQPAVIPASVQPVPPAAIQQGTLSQASGDSIAQSIPQPQQTPPTQPPPPQQQQQQQQQQQQQQQQQQQQQQQAQPPVLPHSQPPFPGQQTPNQLMPSNMPVGMPTNMSEQGASMQTEVMTTPAAPVPPSQ
SIO_010081: smarcc2
subclass of: SO_0000673
so part of: smarcc2
location: complement(join(64643..64710,66443..66526,68623..69019,69128..69262,69635..69801,72222..72360,72941..73002,74608..74769,75789..76047,77925..77987,78100..78213,79107..79260,81013..81126,81848..81919,83750..83880,86172..86209,87658..87717,94361..94491,104695..104810,105903..106034,108952..109027,110832..110901,111681..111750,113880..113972,114862..114943,115255..115340,121794..121913,127540..127650))
location: region:64643-127650:-1
so has part: feature:127540-127650:-1:exon
so has part: feature:121794-121913:-1:exon
so has part: feature:115255-115340:-1:exon
so has part: feature:114862-114943:-1:exon
so has part: feature:113880-113972:-1:exon
so has part: feature:111681-111750:-1:exon
so has part: feature:110832-110901:-1:exon
so has part: feature:108952-109027:-1:exon
so has part: feature:105903-106034:-1:exon
so has part: feature:104695-104810:-1:exon
so has part: feature:94361-94491:-1:exon
so has part: feature:87658-87717:-1:exon
so has part: feature:86172-86209:-1:exon
so has part: feature:83750-83880:-1:exon
so has part: feature:81848-81919:-1:exon
so has part: feature:81013-81126:-1:exon
so has part: feature:79107-79260:-1:exon
so has part: feature:78100-78213:-1:exon
so has part: feature:77925-77987:-1:exon
so has part: feature:75789-76047:-1:exon
so has part: feature:74608-74769:-1:exon
so has part: feature:72941-73002:-1:exon
so has part: feature:72222-72360:-1:exon
so has part: feature:69635-69801:-1:exon
so has part: feature:69128-69262:-1:exon
so has part: feature:68623-69019:-1:exon
so has part: feature:66443-66526:-1:exon
so has part: feature:64643-64710:-1:exon

XP_032871581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127540-127650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121794-121913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115255-115340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114862-114943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113880-113972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111681-111750:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110832-110901:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108952-109027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105903-106034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104695-104810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94361-94491:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87658-87717:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:86172-86209:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83750-83880:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81848-81919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81013-81126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79107-79260:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78100-78213:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77925-77987:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75789-76047:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74608-74769:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:72941-73002:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:72222-72360:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:69635-69801:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:69128-69262:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:68623-69019:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:66443-66526:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:64643-64710:-1:exon

smarcc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: smarcc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF complex subunit SMARCC2 isoform X8
translation: MAVRKKDGGPNVKYFESSDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPMKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKTLVQNHCLSRPNIYLNSEIEPKLLSKLKDIIKRHQGTVTEDKSNASHIVYPIPGSLEDEEWVRPIMKREKQVLLHWGYCPDSYDTWIAASEIEAAVEDPPPTERPRKVHAKWIMDTDTFNEWMNEEDYEVNDDRSPVVRRKRISAKTLTEEVHSPDSDRRDKKGSAHKKRKRSPSPSPTPDPKKKNTKKGRSPATPYAKSKRGHREEDQEDLTKDMDEPSPVPNVEEVTLPKSVNTKKDSESAPVKGGTMTDLDEQEDDSLETTGKDEEDVSTGNKGEQTKNSELHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKAPQTSASQQMLNFPDKNKEKAPDMQNFGLRTDMYAKKNIPKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAFQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPSALVEAHVKKVEDAAKVTGKADPTFGLESSGIAGTTQDEPEKSEEGSDEMKSDAQSADDKKESKLVCSKDKEIAGEDENKEKQPDTSKKEEDKGKECEPDKENEKAEVEVADTEREKENKEFQDEGAKKDGESEADKKTKLERDVGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLSDRQAFHMEQLKYAEMRARQQHFQQMHQQQQQQHQLPSGPQASQQPAVIPASVQPVPPAAIQQGTLSQASGDSIAQSIPQPQQTPPTQPPPPQQQQQQQQQQQQQQQQQQQQQQQAQPPVLPHSQPPFPGQQTPNQLMPSNMPVGMPTNMSGSAAAQSPAIVAATSPLAEQGASMQTEVMTTPAAPVPPSQ
SIO_010081: smarcc2
subclass of: SO_0000673
so part of: smarcc2
location: complement(join(64643..64710,66119..66172,66443..66526,68623..69019,69128..69262,69635..69801,72222..72360,72941..73002,74608..74769,75789..76047,77925..77987,78100..78213,79107..79260,81013..81126,81848..81919,83750..83880,86172..86209,87658..87717,94361..94491,104695..104810,105903..106034,108952..109027,110832..110901,111681..111750,113880..113972,114862..114943,115255..115340,121794..121913,127540..127650))
location: region:64643-127650:-1
so has part: feature:127540-127650:-1:exon
so has part: feature:121794-121913:-1:exon
so has part: feature:115255-115340:-1:exon
so has part: feature:114862-114943:-1:exon
so has part: feature:113880-113972:-1:exon
so has part: feature:111681-111750:-1:exon
so has part: feature:110832-110901:-1:exon
so has part: feature:108952-109027:-1:exon
so has part: feature:105903-106034:-1:exon
so has part: feature:104695-104810:-1:exon
so has part: feature:94361-94491:-1:exon
so has part: feature:87658-87717:-1:exon
so has part: feature:86172-86209:-1:exon
so has part: feature:83750-83880:-1:exon
so has part: feature:81848-81919:-1:exon
so has part: feature:81013-81126:-1:exon
so has part: feature:79107-79260:-1:exon
so has part: feature:78100-78213:-1:exon
so has part: feature:77925-77987:-1:exon
so has part: feature:75789-76047:-1:exon
so has part: feature:74608-74769:-1:exon
so has part: feature:72941-73002:-1:exon
so has part: feature:72222-72360:-1:exon
so has part: feature:69635-69801:-1:exon
so has part: feature:69128-69262:-1:exon
so has part: feature:68623-69019:-1:exon
so has part: feature:66443-66526:-1:exon
so has part: feature:66119-66172:-1:exon
so has part: feature:64643-64710:-1:exon

XP_032871580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127540-127650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121794-121913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115255-115340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114862-114943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113880-113972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111681-111750:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110832-110901:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108952-109027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105903-106034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104695-104810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94361-94491:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87658-87717:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:86172-86209:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83750-83880:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81848-81919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81013-81126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79107-79260:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78100-78213:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77925-77987:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75789-76047:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74608-74769:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:72941-73002:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:72222-72360:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:69635-69801:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:69128-69262:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:68623-69019:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:66443-66526:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:66119-66172:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:64643-64710:-1:exon

smarcc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: smarcc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF complex subunit SMARCC2 isoform X7
translation: MAVRKKDGGPNVKYFESSDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPMKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKTLVQNHCLSRPNIYLNSEIEPKLLSKLKDIIKRHQGTVTEDKSNASHIVYPIPGSLEDEEWVRPIMKREKQVLLHWGYCPDSYDTWIAASEIEAAVEDPPPTERPRKVHAKWIMDTDTFNEWMNEEDYEVNDDRSPVVRRKRISAKTLTEEVHSPDSDRRDKKGSAHKKRKRSPSPSPTPDPKKKNTKKGRSPATPYAKSKRGHREEDQEDLTKDMDEPSPVPNVEEVTLPKSVNTKKDSESAPVKGGTMTDLDEQEDDSLETTGKDEEDVSTGNKGEQTKNSELHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKAPQTSASQQMLNFPDKNKEKAPDMQNFGLRTDMYAKKNIPKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAFQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPSALVEAHVKKVEDAAKVTGKADPTFGLESSGIAGTTQDEPEKSEEGSDEMKSDAQSADDKKESKLVCSKDKEIAGEDENKEKQPDTSKKEEDKGKECEPDKENEKAEVEVADTEREKENKEFQDEGAKKDGESEADKKTKLERDVGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLSDRQAFHMEQLKYAEMRARQQHFQQMHQQQQQQHQLPSGPQASQQPAVIPASVQPVPPAAIQQGTLSQASGDSIAQSIPQPQQTPPTQPPPPQQQQQQQQQQQQQQQQQQQQQQQAQPPVLPHSQPPFPGQQTPNQLMPSNMPVGMPTNMSGNINTGSMSLTSTPGSAAAQSPAIVAATSPLAEQGASMQTEVMTTPAAPVPPSQ
SIO_010081: smarcc2
subclass of: SO_0000673
so part of: smarcc2
location: complement(join(64643..64710,66119..66214,66443..66526,68623..69019,69128..69262,69635..69801,72222..72360,72941..73002,74608..74769,75789..76047,77925..77987,78100..78213,79107..79260,81013..81126,81848..81919,83750..83880,86172..86209,87658..87717,94361..94491,104695..104810,105903..106034,108952..109027,110832..110901,111681..111750,113880..113972,114862..114943,115255..115340,121794..121913,127540..127650))
location: region:64643-127650:-1
so has part: feature:127540-127650:-1:exon
so has part: feature:121794-121913:-1:exon
so has part: feature:115255-115340:-1:exon
so has part: feature:114862-114943:-1:exon
so has part: feature:113880-113972:-1:exon
so has part: feature:111681-111750:-1:exon
so has part: feature:110832-110901:-1:exon
so has part: feature:108952-109027:-1:exon
so has part: feature:105903-106034:-1:exon
so has part: feature:104695-104810:-1:exon
so has part: feature:94361-94491:-1:exon
so has part: feature:87658-87717:-1:exon
so has part: feature:86172-86209:-1:exon
so has part: feature:83750-83880:-1:exon
so has part: feature:81848-81919:-1:exon
so has part: feature:81013-81126:-1:exon
so has part: feature:79107-79260:-1:exon
so has part: feature:78100-78213:-1:exon
so has part: feature:77925-77987:-1:exon
so has part: feature:75789-76047:-1:exon
so has part: feature:74608-74769:-1:exon
so has part: feature:72941-73002:-1:exon
so has part: feature:72222-72360:-1:exon
so has part: feature:69635-69801:-1:exon
so has part: feature:69128-69262:-1:exon
so has part: feature:68623-69019:-1:exon
so has part: feature:66443-66526:-1:exon
so has part: feature:66119-66214:-1:exon
so has part: feature:64643-64710:-1:exon

XP_032871579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127540-127650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121794-121913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115255-115340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114862-114943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113880-113972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111681-111750:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110832-110901:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108952-109027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105903-106034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104695-104810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94361-94491:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87658-87717:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:86172-86209:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83750-83880:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81848-81919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81013-81126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79107-79260:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78100-78213:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77925-77987:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75789-76047:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74608-74769:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:72941-73002:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:72222-72360:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:69635-69801:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:69128-69262:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:68623-69019:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:66443-66526:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:66119-66214:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:64643-64710:-1:exon

smarcc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: smarcc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF complex subunit SMARCC2 isoform X1
translation: MAVRKKDGGPNVKYFESSDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPMKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRNVEMFMTIEKTLVQNHCLSRPNIYLNSEIEPKLLSKLKDIIKRHQGTVTEDKSNASHIVYPIPGSLEDEEWVRPIMKREKQVLLHWGYCPDSYDTWIAASEIEAAVEDPPPTERPRKVHAKWIMDTDTFNEWMNEEDYEVNDDRSPVVRRKRISAKTLTEEVHSPDSDRRDKKGSAHKKRKRSPSPSPTPDPKKKNTKKGRSPATPYAKSKRGHREEDQEDLTKDMDEPSPVPNVEEVTLPKSVNTKKDSESAPVKGGTMTDLDEQEDDSLETTGKDEEDVSTGNKGEQTKNSELHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKAPQTSASQQMLNFPDKNKEKAPDMQNFGLRTDMYAKKNIPKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAFQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPSALVEAHVKKVEDAAKVTGKADPTFGLESSGIAGTTQDEPEKSEEGSDEMKSDAQSADDKKESKLVCSKDKEIAGEDENKEKQPDTSKKEEDKGKECEPDKENEKAEVEVADTEREKENKEFQDEGAKKDGESEADKKTKLERDVGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLSDRQAFHMEQLKYAEMRARQQHFQQMHQQQQQQHQLPSGPQASQQPAVIPASVQPVPPAAIQQGTLSQASGDSIAQSIPQPQQTPPTQPPPPQQQQQQQQQQQQQQQQQQQQQQQAQPPVLPHSQPPFPGQQTPNQLMPSNMPVGMPTNMSGNMAAGIPCVVPANVACSMGSAITENIPVNLPTCMPNPVHDNMSSSMSAVVPDNIGTGLPGNVPVDLPDSLHPNIPGNINTGSMSLTSTPGSAAAQSPAIVAATSPLAEQGASMQTEVMTTPAAPVPPSQ
SIO_010081: smarcc2
subclass of: SO_0000673
so part of: smarcc2
location: complement(join(64643..64710,66119..66526,68623..69019,69128..69262,69635..69801,72222..72360,72941..73002,74608..74769,75789..76047,77925..77987,78100..78213,79107..79260,81013..81126,81848..81919,83750..83880,86172..86209,87658..87717,94361..94491,104695..104810,105903..106034,108952..109027,110832..110901,111681..111750,113880..113972,114862..114943,115255..115340,121794..121913,127540..127650))
location: region:64643-127650:-1
so has part: feature:127540-127650:-1:exon
so has part: feature:121794-121913:-1:exon
so has part: feature:115255-115340:-1:exon
so has part: feature:114862-114943:-1:exon
so has part: feature:113880-113972:-1:exon
so has part: feature:111681-111750:-1:exon
so has part: feature:110832-110901:-1:exon
so has part: feature:108952-109027:-1:exon
so has part: feature:105903-106034:-1:exon
so has part: feature:104695-104810:-1:exon
so has part: feature:94361-94491:-1:exon
so has part: feature:87658-87717:-1:exon
so has part: feature:86172-86209:-1:exon
so has part: feature:83750-83880:-1:exon
so has part: feature:81848-81919:-1:exon
so has part: feature:81013-81126:-1:exon
so has part: feature:79107-79260:-1:exon
so has part: feature:78100-78213:-1:exon
so has part: feature:77925-77987:-1:exon
so has part: feature:75789-76047:-1:exon
so has part: feature:74608-74769:-1:exon
so has part: feature:72941-73002:-1:exon
so has part: feature:72222-72360:-1:exon
so has part: feature:69635-69801:-1:exon
so has part: feature:69128-69262:-1:exon
so has part: feature:68623-69019:-1:exon
so has part: feature:66119-66526:-1:exon
so has part: feature:64643-64710:-1:exon

XP_032871572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127540-127650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121794-121913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115255-115340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114862-114943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113880-113972:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111681-111750:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110832-110901:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108952-109027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:105903-106034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:104695-104810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94361-94491:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87658-87717:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:86172-86209:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83750-83880:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:81848-81919:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:81013-81126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79107-79260:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78100-78213:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77925-77987:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75789-76047:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74608-74769:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:72941-73002:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:72222-72360:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:69635-69801:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:69128-69262:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:68623-69019:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:66119-66526:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:64643-64710:-1:exon

LOC116968763
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 130430..177444
location: region:130430-177444:1
so has part: feature:130430-177444:1:exon
subclass of: SO_0000010

116968763
type: Gene
SIO_000068: ncbigene

position:130430:1
position: 130430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177444:1
position: 177444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130430-177444:1:exon

LOC116968763
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968763
product: calcitonin gene-related peptide type 1 receptor-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033015583.1
SIO_010081: LOC116968763
subclass of: SO_0000673
so part of: LOC116968763
location: join(130430..130502,150051..150149,153865..154015,157106..157216,157809..157921,161327..161418,164821..164947,170469..170622,171635..171695,173107..173173,173615..173833,175934..175975,176837..177444)
location: region:130430-177444:1
so has part: feature:130430-130502:1:exon
so has part: feature:150051-150149:1:exon
so has part: feature:153865-154015:1:exon
so has part: feature:157106-157216:1:exon
so has part: feature:157809-157921:1:exon
so has part: feature:161327-161418:1:exon
so has part: feature:164821-164947:1:exon
so has part: feature:170469-170622:1:exon
so has part: feature:171635-171695:1:exon
so has part: feature:173107-173173:1:exon
so has part: feature:173615-173833:1:exon
so has part: feature:175934-175975:1:exon
so has part: feature:176837-177444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:130430-130502:1:exon

position:130502:1
position: 130502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:150051-150149:1:exon

position:150051:1
position: 150051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150149:1
position: 150149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:153865-154015:1:exon

position:153865:1
position: 153865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154015:1
position: 154015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:157106-157216:1:exon

position:157106:1
position: 157106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157216:1
position: 157216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:157809-157921:1:exon

position:157809:1
position: 157809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157921:1
position: 157921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:161327-161418:1:exon

position:161327:1
position: 161327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161418:1
position: 161418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:164821-164947:1:exon

position:164821:1
position: 164821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164947:1
position: 164947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:170469-170622:1:exon

position:170469:1
position: 170469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170622:1
position: 170622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:171635-171695:1:exon

position:171635:1
position: 171635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171695:1
position: 171695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:173107-173173:1:exon

position:173107:1
position: 173107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173173:1
position: 173173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:173615-173833:1:exon

position:173615:1
position: 173615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173833:1
position: 173833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:175934-175975:1:exon

position:175934:1
position: 175934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175975:1
position: 175975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:176837-177444:1:exon

position:176837:1
position: 176837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968763
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968763
product: calcitonin gene-related peptide type 1 receptor-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033015582.1
SIO_010081: LOC116968763
subclass of: SO_0000673
so part of: LOC116968763
location: join(130431..130502,137469..137580,150051..150149,153865..154015,157106..157216,157809..157921,161327..161418,164821..164947,170469..170622,171635..171695,173107..173173,173615..173833,175934..175975,176837..177443)
location: region:130431-177443:1
so has part: feature:130431-130502:1:exon
so has part: feature:137469-137580:1:exon
so has part: feature:150051-150149:1:exon
so has part: feature:153865-154015:1:exon
so has part: feature:157106-157216:1:exon
so has part: feature:157809-157921:1:exon
so has part: feature:161327-161418:1:exon
so has part: feature:164821-164947:1:exon
so has part: feature:170469-170622:1:exon
so has part: feature:171635-171695:1:exon
so has part: feature:173107-173173:1:exon
so has part: feature:173615-173833:1:exon
so has part: feature:175934-175975:1:exon
so has part: feature:176837-177443:1:exon

position:130431:1
position: 130431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177443:1
position: 177443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130431-130502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137469-137580:1:exon

position:137469:1
position: 137469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137580:1
position: 137580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:150051-150149:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153865-154015:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157106-157216:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157809-157921:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161327-161418:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:164821-164947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:170469-170622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:171635-171695:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:173107-173173:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:173615-173833:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:175934-175975:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:176837-177443:1:exon

LOC116968765
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(130745..143116)
location: region:130745-143116:-1
so has part: feature:130745-143116:-1:exon
subclass of: SO_0000011

116968765
type: Gene
SIO_000068: ncbigene

position:130745:-1
position: 130745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143116:-1
position: 143116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130745-143116:-1:exon

LOC116968765
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968765
product: uncharacterized LOC116968765
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004410524.1
SIO_010081: LOC116968765
subclass of: SO_0000673
so part of: LOC116968765
location: complement(join(130745..131016,132644..132666,143035..143116))
location: region:130745-143116:-1
so has part: feature:143035-143116:-1:exon
so has part: feature:132644-132666:-1:exon
so has part: feature:130745-131016:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:143035-143116:-1:exon

position:143035:-1
position: 143035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:132644-132666:-1:exon

position:132644:-1
position: 132644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132666:-1
position: 132666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:130745-131016:-1:exon

position:131016:-1
position: 131016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968763
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968763
product: calcitonin gene-related peptide type 1 receptor-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015585.1
SIO_010081: LOC116968763
subclass of: SO_0000673
so part of: LOC116968763
location: join(137526..137580,150051..150149,153865..154015,157106..157216,157809..157921,161327..161418,164821..164947,170469..170622,171635..171695,173107..173173,173615..173833,175934..175975,176837..177444)
location: region:137526-177444:1
so has part: feature:137526-137580:1:exon
so has part: feature:150051-150149:1:exon
so has part: feature:153865-154015:1:exon
so has part: feature:157106-157216:1:exon
so has part: feature:157809-157921:1:exon
so has part: feature:161327-161418:1:exon
so has part: feature:164821-164947:1:exon
so has part: feature:170469-170622:1:exon
so has part: feature:171635-171695:1:exon
so has part: feature:173107-173173:1:exon
so has part: feature:173615-173833:1:exon
so has part: feature:175934-175975:1:exon
so has part: feature:176837-177444:1:exon

position:137526:1
position: 137526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137526-137580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150051-150149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153865-154015:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157106-157216:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157809-157921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161327-161418:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164821-164947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170469-170622:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:171635-171695:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173107-173173:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:173615-173833:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:175934-175975:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:176837-177444:1:exon

LOC116968763
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968763
product: calcitonin gene-related peptide type 1 receptor-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033015581.1
SIO_010081: LOC116968763
subclass of: SO_0000673
so part of: LOC116968763
location: join(143195..143381,150051..150149,153865..154015,157106..157216,157809..157921,161327..161418,164821..164947,170469..170622,171635..171695,173107..173173,173615..173833,175934..175975,176837..177443)
location: region:143195-177443:1
so has part: feature:143195-143381:1:exon
so has part: feature:150051-150149:1:exon
so has part: feature:153865-154015:1:exon
so has part: feature:157106-157216:1:exon
so has part: feature:157809-157921:1:exon
so has part: feature:161327-161418:1:exon
so has part: feature:164821-164947:1:exon
so has part: feature:170469-170622:1:exon
so has part: feature:171635-171695:1:exon
so has part: feature:173107-173173:1:exon
so has part: feature:173615-173833:1:exon
so has part: feature:175934-175975:1:exon
so has part: feature:176837-177443:1:exon

position:143195:1
position: 143195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143195-143381:1:exon

position:143381:1
position: 143381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:150051-150149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153865-154015:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157106-157216:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157809-157921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161327-161418:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164821-164947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170469-170622:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:171635-171695:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173107-173173:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:173615-173833:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:175934-175975:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:176837-177443:1:exon

LOC116968763
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcitonin gene-related peptide type 1 receptor-like
translation: MLSFTLCGQNMFHDMKRGAIVCLLLVTMFTQSAGCVAHTTIHPSGETASVPTLLTESRTTIMSAQYKCYLKIIRDPPYETKGSYCNRTWDGWLCWDDTPAGSTSVRHCPNYFQSFDLTEKVTKICTENGRWFQHPMSNRTWTNYTQCTVYTQGKKMMALNLYYVAITGHGISIICLLISLCIFFHFKSLSCQRISLHKSLFVSFILNSIVTIIWLSAVVNNKELMERNPVGCKILLFIQLYLMGCNYFWMLCEGVYLHTLIIVAVFVEEQKLFWYYVLGWGFPLIPAIIHSIARNTYFNDNCWMSPDTHLIYIVHGPIYAALLVNLLFLLNIVRVLIIKLKVTHQVQFKVYIKVVRATLILVPLLGIQIVLIPMRPDGDLTGKIYHHVTHIAGHYQGFLVTLIFCFFNGEVQTALKKHWSQYRDQSSHQFTNTEGSHSNVTSMSEISRGCLVQSGNKNRTNGKSWCEALPQKIISNSV
SIO_010081: LOC116968763
subclass of: SO_0000673
so part of: LOC116968763
location: join(150057..150149,153865..154015,157106..157216,157809..157921,161327..161418,164821..164947,170469..170622,171635..171695,173107..173173,173615..173833,175934..175975,176837..177043)
location: region:150057-177043:1
so has part: feature:150057-150149:1:exon
so has part: feature:153865-154015:1:exon
so has part: feature:157106-157216:1:exon
so has part: feature:157809-157921:1:exon
so has part: feature:161327-161418:1:exon
so has part: feature:164821-164947:1:exon
so has part: feature:170469-170622:1:exon
so has part: feature:171635-171695:1:exon
so has part: feature:173107-173173:1:exon
so has part: feature:173615-173833:1:exon
so has part: feature:175934-175975:1:exon
so has part: feature:176837-177043:1:exon

XP_032871472.1
type: Protein
SIO_000068: ncbiprotein

position:150057:1
position: 150057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177043:1
position: 177043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150057-150149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:153865-154015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157106-157216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157809-157921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161327-161418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164821-164947:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170469-170622:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:171635-171695:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:173107-173173:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173615-173833:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:175934-175975:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:176837-177043:1:exon

LOC116968763
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcitonin gene-related peptide type 1 receptor-like
translation: MLSFTLCGQNMFHDMKRGAIVCLLLVTMFTQSAGCVAHTTIHPSGETASVPTLLTESRTTIMSAQYKCYLKIIRDPPYETKGSYCNRTWDGWLCWDDTPAGSTSVRHCPNYFQSFDLTEKVTKICTENGRWFQHPMSNRTWTNYTQCTVYTQGKKMMALNLYYVAITGHGISIICLLISLCIFFHFKSLSCQRISLHKSLFVSFILNSIVTIIWLSAVVNNKELMERNPVGCKILLFIQLYLMGCNYFWMLCEGVYLHTLIIVAVFVEEQKLFWYYVLGWGFPLIPAIIHSIARNTYFNDNCWMSPDTHLIYIVHGPIYAALLVNLLFLLNIVRVLIIKLKVTHQVQFKVYIKVVRATLILVPLLGIQIVLIPMRPDGDLTGKIYHHVTHIAGHYQGFLVTLIFCFFNGEVQTALKKHWSQYRDQSSHQFTNTEGSHSNVTSMSEISRGCLVQSGNKNRTNGKSWCEALPQKIISNSV
SIO_010081: LOC116968763
subclass of: SO_0000673
so part of: LOC116968763
location: join(150057..150149,153865..154015,157106..157216,157809..157921,161327..161418,164821..164947,170469..170622,171635..171695,173107..173173,173615..173833,175934..175975,176837..177043)
location: region:150057-177043:1
so has part: feature:150057-150149:1:exon
so has part: feature:153865-154015:1:exon
so has part: feature:157106-157216:1:exon
so has part: feature:157809-157921:1:exon
so has part: feature:161327-161418:1:exon
so has part: feature:164821-164947:1:exon
so has part: feature:170469-170622:1:exon
so has part: feature:171635-171695:1:exon
so has part: feature:173107-173173:1:exon
so has part: feature:173615-173833:1:exon
so has part: feature:175934-175975:1:exon
so has part: feature:176837-177043:1:exon

XP_032871473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150057-150149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:153865-154015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157106-157216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157809-157921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161327-161418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164821-164947:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170469-170622:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:171635-171695:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:173107-173173:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173615-173833:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:175934-175975:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:176837-177043:1:exon

LOC116968763
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcitonin gene-related peptide type 1 receptor-like
translation: MLSFTLCGQNMFHDMKRGAIVCLLLVTMFTQSAGCVAHTTIHPSGETASVPTLLTESRTTIMSAQYKCYLKIIRDPPYETKGSYCNRTWDGWLCWDDTPAGSTSVRHCPNYFQSFDLTEKVTKICTENGRWFQHPMSNRTWTNYTQCTVYTQGKKMMALNLYYVAITGHGISIICLLISLCIFFHFKSLSCQRISLHKSLFVSFILNSIVTIIWLSAVVNNKELMERNPVGCKILLFIQLYLMGCNYFWMLCEGVYLHTLIIVAVFVEEQKLFWYYVLGWGFPLIPAIIHSIARNTYFNDNCWMSPDTHLIYIVHGPIYAALLVNLLFLLNIVRVLIIKLKVTHQVQFKVYIKVVRATLILVPLLGIQIVLIPMRPDGDLTGKIYHHVTHIAGHYQGFLVTLIFCFFNGEVQTALKKHWSQYRDQSSHQFTNTEGSHSNVTSMSEISRGCLVQSGNKNRTNGKSWCEALPQKIISNSV
SIO_010081: LOC116968763
subclass of: SO_0000673
so part of: LOC116968763
location: join(150057..150149,153865..154015,157106..157216,157809..157921,161327..161418,164821..164947,170469..170622,171635..171695,173107..173173,173615..173833,175934..175975,176837..177043)
location: region:150057-177043:1
so has part: feature:150057-150149:1:exon
so has part: feature:153865-154015:1:exon
so has part: feature:157106-157216:1:exon
so has part: feature:157809-157921:1:exon
so has part: feature:161327-161418:1:exon
so has part: feature:164821-164947:1:exon
so has part: feature:170469-170622:1:exon
so has part: feature:171635-171695:1:exon
so has part: feature:173107-173173:1:exon
so has part: feature:173615-173833:1:exon
so has part: feature:175934-175975:1:exon
so has part: feature:176837-177043:1:exon

XP_032871474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150057-150149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:153865-154015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157106-157216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157809-157921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161327-161418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164821-164947:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170469-170622:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:171635-171695:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:173107-173173:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173615-173833:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:175934-175975:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:176837-177043:1:exon

LOC116968763
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968763
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcitonin gene-related peptide type 1 receptor-like
translation: MLSFTLCGQNMFHDMKRGAIVCLLLVTMFTQSAGCVAHTTIHPSGETASVPTLLTESRTTIMSAQYKCYLKIIRDPPYETKGSYCNRTWDGWLCWDDTPAGSTSVRHCPNYFQSFDLTEKVTKICTENGRWFQHPMSNRTWTNYTQCTVYTQGKKMMALNLYYVAITGHGISIICLLISLCIFFHFKSLSCQRISLHKSLFVSFILNSIVTIIWLSAVVNNKELMERNPVGCKILLFIQLYLMGCNYFWMLCEGVYLHTLIIVAVFVEEQKLFWYYVLGWGFPLIPAIIHSIARNTYFNDNCWMSPDTHLIYIVHGPIYAALLVNLLFLLNIVRVLIIKLKVTHQVQFKVYIKVVRATLILVPLLGIQIVLIPMRPDGDLTGKIYHHVTHIAGHYQGFLVTLIFCFFNGEVQTALKKHWSQYRDQSSHQFTNTEGSHSNVTSMSEISRGCLVQSGNKNRTNGKSWCEALPQKIISNSV
SIO_010081: LOC116968763
subclass of: SO_0000673
so part of: LOC116968763
location: join(150057..150149,153865..154015,157106..157216,157809..157921,161327..161418,164821..164947,170469..170622,171635..171695,173107..173173,173615..173833,175934..175975,176837..177043)
location: region:150057-177043:1
so has part: feature:150057-150149:1:exon
so has part: feature:153865-154015:1:exon
so has part: feature:157106-157216:1:exon
so has part: feature:157809-157921:1:exon
so has part: feature:161327-161418:1:exon
so has part: feature:164821-164947:1:exon
so has part: feature:170469-170622:1:exon
so has part: feature:171635-171695:1:exon
so has part: feature:173107-173173:1:exon
so has part: feature:173615-173833:1:exon
so has part: feature:175934-175975:1:exon
so has part: feature:176837-177043:1:exon

XP_032871476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150057-150149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:153865-154015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157106-157216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157809-157921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161327-161418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164821-164947:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170469-170622:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:171635-171695:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:173107-173173:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173615-173833:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:175934-175975:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:176837-177043:1:exon

spryd3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: spryd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(181578..263714)
location: region:181578-263714:-1
so has part: feature:181578-263714:-1:exon
subclass of: SO_0000010

116968698
type: Gene
SIO_000068: ncbigene

position:181578:-1
position: 181578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263714:-1
position: 263714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181578-263714:-1:exon

spryd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: spryd3
product: SPRY domain containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033015435.1
SIO_010081: spryd3
subclass of: SO_0000673
so part of: spryd3
location: complement(join(181578..182030,183722..183861,186044..186163,200558..200615,228556..228705,247270..247458,248598..248733,250116..250240,256092..256167,258001..258108,261805..261810,263608..263714))
location: region:181578-263714:-1
so has part: feature:263608-263714:-1:exon
so has part: feature:261805-261810:-1:exon
so has part: feature:258001-258108:-1:exon
so has part: feature:256092-256167:-1:exon
so has part: feature:250116-250240:-1:exon
so has part: feature:248598-248733:-1:exon
so has part: feature:247270-247458:-1:exon
so has part: feature:228556-228705:-1:exon
so has part: feature:200558-200615:-1:exon
so has part: feature:186044-186163:-1:exon
so has part: feature:183722-183861:-1:exon
so has part: feature:181578-182030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263608-263714:-1:exon

position:263608:-1
position: 263608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:261805-261810:-1:exon

position:261805:-1
position: 261805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261810:-1
position: 261810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:258001-258108:-1:exon

position:258001:-1
position: 258001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258108:-1
position: 258108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:256092-256167:-1:exon

position:256092:-1
position: 256092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256167:-1
position: 256167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:250116-250240:-1:exon

position:250116:-1
position: 250116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250240:-1
position: 250240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:248598-248733:-1:exon

position:248598:-1
position: 248598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248733:-1
position: 248733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:247270-247458:-1:exon

position:247270:-1
position: 247270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247458:-1
position: 247458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:228556-228705:-1:exon

position:228556:-1
position: 228556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228705:-1
position: 228705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:200558-200615:-1:exon

position:200558:-1
position: 200558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200615:-1
position: 200615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:186044-186163:-1:exon

position:186044:-1
position: 186044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186163:-1
position: 186163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:183722-183861:-1:exon

position:183722:-1
position: 183722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183861:-1
position: 183861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:181578-182030:-1:exon

position:182030:-1
position: 182030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

spryd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: spryd3
product: SPRY domain containing 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033015436.1
SIO_010081: spryd3
subclass of: SO_0000673
so part of: spryd3
location: complement(join(181578..182030,183722..183861,200558..200615,228556..228705,247270..247458,248598..248733,250116..250240,256092..256167,257965..258108,261805..261810,263608..263714))
location: region:181578-263714:-1
so has part: feature:263608-263714:-1:exon
so has part: feature:261805-261810:-1:exon
so has part: feature:257965-258108:-1:exon
so has part: feature:256092-256167:-1:exon
so has part: feature:250116-250240:-1:exon
so has part: feature:248598-248733:-1:exon
so has part: feature:247270-247458:-1:exon
so has part: feature:228556-228705:-1:exon
so has part: feature:200558-200615:-1:exon
so has part: feature:183722-183861:-1:exon
so has part: feature:181578-182030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263608-263714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:261805-261810:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:257965-258108:-1:exon

position:257965:-1
position: 257965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:256092-256167:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250116-250240:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:248598-248733:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:247270-247458:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228556-228705:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200558-200615:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183722-183861:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:181578-182030:-1:exon

spryd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: spryd3
product: SPRY domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033015433.1
SIO_010081: spryd3
subclass of: SO_0000673
so part of: spryd3
location: complement(join(181578..182030,183722..183861,186044..186163,200558..200615,228556..228705,247270..247458,248598..248733,250116..250240,256092..256167,257965..258108,261805..261810,263608..263714))
location: region:181578-263714:-1
so has part: feature:263608-263714:-1:exon
so has part: feature:261805-261810:-1:exon
so has part: feature:257965-258108:-1:exon
so has part: feature:256092-256167:-1:exon
so has part: feature:250116-250240:-1:exon
so has part: feature:248598-248733:-1:exon
so has part: feature:247270-247458:-1:exon
so has part: feature:228556-228705:-1:exon
so has part: feature:200558-200615:-1:exon
so has part: feature:186044-186163:-1:exon
so has part: feature:183722-183861:-1:exon
so has part: feature:181578-182030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263608-263714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:261805-261810:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:257965-258108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256092-256167:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250116-250240:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:248598-248733:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:247270-247458:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228556-228705:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200558-200615:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:186044-186163:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:183722-183861:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:181578-182030:-1:exon

spryd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: spryd3
product: SPRY domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033015434.1
SIO_010081: spryd3
subclass of: SO_0000673
so part of: spryd3
location: complement(join(181578..182030,183722..183861,186044..186163,200558..200615,228556..228705,247270..247458,248598..248733,250116..250240,256092..256167,257965..258105,263604..263703))
location: region:181578-263703:-1
so has part: feature:263604-263703:-1:exon
so has part: feature:257965-258105:-1:exon
so has part: feature:256092-256167:-1:exon
so has part: feature:250116-250240:-1:exon
so has part: feature:248598-248733:-1:exon
so has part: feature:247270-247458:-1:exon
so has part: feature:228556-228705:-1:exon
so has part: feature:200558-200615:-1:exon
so has part: feature:186044-186163:-1:exon
so has part: feature:183722-183861:-1:exon
so has part: feature:181578-182030:-1:exon

position:263703:-1
position: 263703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263604-263703:-1:exon

position:263604:-1
position: 263604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:257965-258105:-1:exon

position:258105:-1
position: 258105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:256092-256167:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250116-250240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248598-248733:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247270-247458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:228556-228705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:200558-200615:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:186044-186163:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183722-183861:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:181578-182030:-1:exon

spryd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: spryd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPRY domain-containing protein 3 isoform X2
translation: MEDFNLHYRFLNWRRRIREIREVRAVRHQESYHGNSDEVGCYVAPRPLTKENNYFEVCIMDTGVRGTIAVGLVPQYYKLDHQPGWLPHSVAYHADDGKLFNGNGVGQQFGPKCFAGDRIGCGVQTEFFDRGMATVFFTRNGKEVGSVVMAMSPDGLFPAVGMHSLGEEVRIDLQAEWGLDEDDSAMMVDSHEDEWGRLHDVKVCGTLLEYIGKGKSIMDVGLAQARHSLSTRSHYFEVEIVDPGEKCYIALGLARKDYPKNRHPGWSRGSVAYHADDGKLFQGSGVGDPFGPRCYKGDIMGCGIMFPRDYILDSDADSDECTDAAEVNYKQRRVRNIMYFNDEDEEDEGEDMEQEYDGKKVTVFFTRNGKIIGRKEAPVPSGGFYPTIGMLSNGEKVQVDLHPLSG
SIO_010081: spryd3
subclass of: SO_0000673
so part of: spryd3
location: complement(join(181896..182030,183722..183861,186044..186163,200558..200615,228556..228705,247270..247458,248598..248733,250116..250240,256092..256167,258001..258092))
location: region:181896-258092:-1
so has part: feature:258001-258092:-1:exon
so has part: feature:256092-256167:-1:exon
so has part: feature:250116-250240:-1:exon
so has part: feature:248598-248733:-1:exon
so has part: feature:247270-247458:-1:exon
so has part: feature:228556-228705:-1:exon
so has part: feature:200558-200615:-1:exon
so has part: feature:186044-186163:-1:exon
so has part: feature:183722-183861:-1:exon
so has part: feature:181896-182030:-1:exon

XP_032871326.1
type: Protein
SIO_000068: ncbiprotein

position:181896:-1
position: 181896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258092:-1
position: 258092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258001-258092:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:256092-256167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250116-250240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248598-248733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:247270-247458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228556-228705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:200558-200615:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:186044-186163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183722-183861:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:181896-182030:-1:exon

spryd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: spryd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPRY domain-containing protein 3 isoform X3
translation: MEDFNLHYRFLNWRRRIREIREVRAVRHQERYKRILVDGDILSYHGNSDEVGCYVAPRPLTKENNYFEVCIMDTGVRGTIAVGLVPQYYKLDHQPGWLPHSVAYHADDGKLFNGNGVGQQFGPKCFAGDRIGCGVQTEFFDRGMATVFFTRNGKEVGSVVMAMSPDGLFPAVGMHSLGEEVRIDLQAEWGLDEDDSAMMVDSHEDEWGRLHDVKVCGTLLEYIGKGKSIMDVGLAQARHSLSTRSHYFEVEIVDPGEKCYIALGLARKDYPKNRHPGWSRGSVAYHAADSDECTDAAEVNYKQRRVRNIMYFNDEDEEDEGEDMEQEYDGKKVTVFFTRNGKIIGRKEAPVPSGGFYPTIGMLSNGEKVQVDLHPLSG
SIO_010081: spryd3
subclass of: SO_0000673
so part of: spryd3
location: complement(join(181896..182030,183722..183861,200558..200615,228556..228705,247270..247458,248598..248733,250116..250240,256092..256167,257965..258092))
location: region:181896-258092:-1
so has part: feature:257965-258092:-1:exon
so has part: feature:256092-256167:-1:exon
so has part: feature:250116-250240:-1:exon
so has part: feature:248598-248733:-1:exon
so has part: feature:247270-247458:-1:exon
so has part: feature:228556-228705:-1:exon
so has part: feature:200558-200615:-1:exon
so has part: feature:183722-183861:-1:exon
so has part: feature:181896-182030:-1:exon

XP_032871327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257965-258092:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:256092-256167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250116-250240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248598-248733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:247270-247458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228556-228705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:200558-200615:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183722-183861:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:181896-182030:-1:exon

spryd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: spryd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPRY domain-containing protein 3 isoform X1
translation: MEDFNLHYRFLNWRRRIREIREVRAVRHQERYKRILVDGDILSYHGNSDEVGCYVAPRPLTKENNYFEVCIMDTGVRGTIAVGLVPQYYKLDHQPGWLPHSVAYHADDGKLFNGNGVGQQFGPKCFAGDRIGCGVQTEFFDRGMATVFFTRNGKEVGSVVMAMSPDGLFPAVGMHSLGEEVRIDLQAEWGLDEDDSAMMVDSHEDEWGRLHDVKVCGTLLEYIGKGKSIMDVGLAQARHSLSTRSHYFEVEIVDPGEKCYIALGLARKDYPKNRHPGWSRGSVAYHADDGKLFQGSGVGDPFGPRCYKGDIMGCGIMFPRDYILDSDADSDECTDAAEVNYKQRRVRNIMYFNDEDEEDEGEDMEQEYDGKKVTVFFTRNGKIIGRKEAPVPSGGFYPTIGMLSNGEKVQVDLHPLSG
SIO_010081: spryd3
subclass of: SO_0000673
so part of: spryd3
location: complement(join(181896..182030,183722..183861,186044..186163,200558..200615,228556..228705,247270..247458,248598..248733,250116..250240,256092..256167,257965..258092))
location: region:181896-258092:-1
so has part: feature:257965-258092:-1:exon
so has part: feature:256092-256167:-1:exon
so has part: feature:250116-250240:-1:exon
so has part: feature:248598-248733:-1:exon
so has part: feature:247270-247458:-1:exon
so has part: feature:228556-228705:-1:exon
so has part: feature:200558-200615:-1:exon
so has part: feature:186044-186163:-1:exon
so has part: feature:183722-183861:-1:exon
so has part: feature:181896-182030:-1:exon

XP_032871324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257965-258092:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:256092-256167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250116-250240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248598-248733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:247270-247458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228556-228705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:200558-200615:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:186044-186163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183722-183861:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:181896-182030:-1:exon

spryd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: spryd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPRY domain-containing protein 3 isoform X1
translation: MEDFNLHYRFLNWRRRIREIREVRAVRHQERYKRILVDGDILSYHGNSDEVGCYVAPRPLTKENNYFEVCIMDTGVRGTIAVGLVPQYYKLDHQPGWLPHSVAYHADDGKLFNGNGVGQQFGPKCFAGDRIGCGVQTEFFDRGMATVFFTRNGKEVGSVVMAMSPDGLFPAVGMHSLGEEVRIDLQAEWGLDEDDSAMMVDSHEDEWGRLHDVKVCGTLLEYIGKGKSIMDVGLAQARHSLSTRSHYFEVEIVDPGEKCYIALGLARKDYPKNRHPGWSRGSVAYHADDGKLFQGSGVGDPFGPRCYKGDIMGCGIMFPRDYILDSDADSDECTDAAEVNYKQRRVRNIMYFNDEDEEDEGEDMEQEYDGKKVTVFFTRNGKIIGRKEAPVPSGGFYPTIGMLSNGEKVQVDLHPLSG
SIO_010081: spryd3
subclass of: SO_0000673
so part of: spryd3
location: complement(join(181896..182030,183722..183861,186044..186163,200558..200615,228556..228705,247270..247458,248598..248733,250116..250240,256092..256167,257965..258092))
location: region:181896-258092:-1
so has part: feature:257965-258092:-1:exon
so has part: feature:256092-256167:-1:exon
so has part: feature:250116-250240:-1:exon
so has part: feature:248598-248733:-1:exon
so has part: feature:247270-247458:-1:exon
so has part: feature:228556-228705:-1:exon
so has part: feature:200558-200615:-1:exon
so has part: feature:186044-186163:-1:exon
so has part: feature:183722-183861:-1:exon
so has part: feature:181896-182030:-1:exon

XP_032871325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257965-258092:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:256092-256167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250116-250240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248598-248733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:247270-247458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228556-228705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:200558-200615:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:186044-186163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183722-183861:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:181896-182030:-1:exon

LOC116968807
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 276574..287198
location: region:276574-287198:1
so has part: feature:276574-287198:1:exon
subclass of: SO_0000010

116968807
type: Gene
SIO_000068: ncbigene

position:276574:1
position: 276574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287198:1
position: 287198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276574-287198:1:exon

LOC116968807
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968807
product: insulin-like growth factor-binding protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 77 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_033015699.1
SIO_010081: LOC116968807
subclass of: SO_0000673
so part of: LOC116968807
location: join(276574..276944,279515..279711,282690..282809,285567..287198)
location: region:276574-287198:1
so has part: feature:276574-276944:1:exon
so has part: feature:279515-279711:1:exon
so has part: feature:282690-282809:1:exon
so has part: feature:285567-287198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:276574-276944:1:exon

position:276944:1
position: 276944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279515-279711:1:exon

position:279515:1
position: 279515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279711:1
position: 279711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:282690-282809:1:exon

position:282690:1
position: 282690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282809:1
position: 282809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:285567-287198:1:exon

position:285567:1
position: 285567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968807
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor-binding protein 5
translation: MLGMCVLLAGLGLCSRLGALAAMIECGGCSEEEVSACHPPRGCELVRESGCGCCLTCALAEGAACGVYTERCASGLRCVPRGGQPAPLQALLQGRGVCRRSVKRRNQLQHTGRPLDANEKYSFGKRRQGGKTHENPGHRLKLKPHEGNRQSAMGTVHTMTTPSKSTPVTTLAPDSEYGPCRREMELILQDLQPEFLRSPEDIYIPNCDKRGYYRSKQCKSSKGRRRGHCWCVDKYGHSLPGLPGRKRSVSCSQIASSEEFGY
SIO_010081: LOC116968807
subclass of: SO_0000673
so part of: LOC116968807
location: join(276611..276944,279515..279711,282690..282809,285567..285704)
location: region:276611-285704:1
so has part: feature:276611-276944:1:exon
so has part: feature:279515-279711:1:exon
so has part: feature:282690-282809:1:exon
so has part: feature:285567-285704:1:exon

XP_032871590.1
type: Protein
SIO_000068: ncbiprotein

position:276611:1
position: 276611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285704:1
position: 285704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276611-276944:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279515-279711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282690-282809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:285567-285704:1:exon

soat2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: soat2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 289215..323598
location: region:289215-323598:1
so has part: feature:289215-323598:1:exon
subclass of: SO_0000010

116968806
type: Gene
SIO_000068: ncbigene

position:289215:1
position: 289215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323598:1
position: 323598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289215-323598:1:exon

soat2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: soat2
product: sterol O-acyltransferase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033015696.1
SIO_010081: soat2
subclass of: SO_0000673
so part of: soat2
location: join(289215..289415,294360..294457,296476..296534,299852..299988,301547..301606,306128..306235,307287..307569,307970..308045,312060..312144,314535..314580,314853..314982,318093..318190,319069..319167,320371..320506,320995..321140,322142..323598)
location: region:289215-323598:1
so has part: feature:289215-289415:1:exon
so has part: feature:294360-294457:1:exon
so has part: feature:296476-296534:1:exon
so has part: feature:299852-299988:1:exon
so has part: feature:301547-301606:1:exon
so has part: feature:306128-306235:1:exon
so has part: feature:307287-307569:1:exon
so has part: feature:307970-308045:1:exon
so has part: feature:312060-312144:1:exon
so has part: feature:314535-314580:1:exon
so has part: feature:314853-314982:1:exon
so has part: feature:318093-318190:1:exon
so has part: feature:319069-319167:1:exon
so has part: feature:320371-320506:1:exon
so has part: feature:320995-321140:1:exon
so has part: feature:322142-323598:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:289215-289415:1:exon

position:289415:1
position: 289415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294360-294457:1:exon

position:294360:1
position: 294360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294457:1
position: 294457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:296476-296534:1:exon

position:296476:1
position: 296476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296534:1
position: 296534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:299852-299988:1:exon

position:299852:1
position: 299852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299988:1
position: 299988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:301547-301606:1:exon

position:301547:1
position: 301547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301606:1
position: 301606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:306128-306235:1:exon

position:306128:1
position: 306128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306235:1
position: 306235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:307287-307569:1:exon

position:307287:1
position: 307287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307569:1
position: 307569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:307970-308045:1:exon

position:307970:1
position: 307970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308045:1
position: 308045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:312060-312144:1:exon

position:312060:1
position: 312060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312144:1
position: 312144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:314535-314580:1:exon

position:314535:1
position: 314535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314580:1
position: 314580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:314853-314982:1:exon

position:314853:1
position: 314853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314982:1
position: 314982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:318093-318190:1:exon

position:318093:1
position: 318093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318190:1
position: 318190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:319069-319167:1:exon

position:319069:1
position: 319069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319167:1
position: 319167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:320371-320506:1:exon

position:320371:1
position: 320371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320506:1
position: 320506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:320995-321140:1:exon

position:320995:1
position: 320995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321140:1
position: 321140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:322142-323598:1:exon

position:322142:1
position: 322142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

soat2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: soat2
product: sterol O-acyltransferase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015698.1
SIO_010081: soat2
subclass of: SO_0000673
so part of: soat2
location: join(289215..289415,294360..294457,296476..296534,306128..306235,307287..307569,307970..308045,312060..312144,314535..314580,314853..314982,318093..318190,319069..319167,320371..320506,320995..321140,322142..323598)
location: region:289215-323598:1
so has part: feature:289215-289415:1:exon
so has part: feature:294360-294457:1:exon
so has part: feature:296476-296534:1:exon
so has part: feature:306128-306235:1:exon
so has part: feature:307287-307569:1:exon
so has part: feature:307970-308045:1:exon
so has part: feature:312060-312144:1:exon
so has part: feature:314535-314580:1:exon
so has part: feature:314853-314982:1:exon
so has part: feature:318093-318190:1:exon
so has part: feature:319069-319167:1:exon
so has part: feature:320371-320506:1:exon
so has part: feature:320995-321140:1:exon
so has part: feature:322142-323598:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:289215-289415:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294360-294457:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296476-296534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306128-306235:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307287-307569:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307970-308045:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312060-312144:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314535-314580:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:314853-314982:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:318093-318190:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:319069-319167:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320371-320506:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320995-321140:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322142-323598:1:exon

soat2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: soat2
product: sterol O-acyltransferase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033015697.1
SIO_010081: soat2
subclass of: SO_0000673
so part of: soat2
location: join(289215..289393,294360..294457,296476..296534,299852..299988,301547..301606,306128..306235,307287..307569,307970..308045,312060..312144,314535..314580,314853..314982,318093..318190,319069..319167,320371..320506,320995..321140,322142..323598)
location: region:289215-323598:1
so has part: feature:289215-289393:1:exon
so has part: feature:294360-294457:1:exon
so has part: feature:296476-296534:1:exon
so has part: feature:299852-299988:1:exon
so has part: feature:301547-301606:1:exon
so has part: feature:306128-306235:1:exon
so has part: feature:307287-307569:1:exon
so has part: feature:307970-308045:1:exon
so has part: feature:312060-312144:1:exon
so has part: feature:314535-314580:1:exon
so has part: feature:314853-314982:1:exon
so has part: feature:318093-318190:1:exon
so has part: feature:319069-319167:1:exon
so has part: feature:320371-320506:1:exon
so has part: feature:320995-321140:1:exon
so has part: feature:322142-323598:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:289215-289393:1:exon

position:289393:1
position: 289393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294360-294457:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296476-296534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299852-299988:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301547-301606:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306128-306235:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307287-307569:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307970-308045:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:312060-312144:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314535-314580:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:314853-314982:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:318093-318190:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319069-319167:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320371-320506:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:320995-321140:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:322142-323598:1:exon

soat2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: soat2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterol O-acyltransferase 2 isoform X1
translation: MNECMEESKVRERKKQSKENSMQNAAGNDSADHGNDLDHPIAWKKHIKDMKVELLDQFKGHLSELLDRAAEESIESYSHYKQETKSQESGHRNRGKNIATLKGKVFVNRCSILDELFENPHIQTIYHMFIALFIVFVVSTMAVEFIDEGRLILDFDMLVYAFGKFPRVFVTWTCLFLYTLTVPYKALDMWGSSYQLARYPRLATLALGLVLVVCQVCVLGIYPIYTVIHYQLPPASRFIVILEQLRLAMKSYSYIRENVPKVLKAKRSQGEVLQMPAFSCYLYFLFCPTLIYRDSYPRTPKIRWKYVALNFAQALGCLFYLYFILVRLCIPVFTNMSKQPFSTKTLVLSIFNATLPGTFILLLFFYSFLHCWLNAFAEMLRFGDRMFYKDWWNSTSFANYYRTWNVVVHDWLYNYTYTDLVWILGKRFRVAAMLSVFILSAMVHEYVLTLCLGYFYPVMFCLFAILGVFFNFIFNDSRTGPGWNIMMWVFLFIGQGIQVCLYCQEWYAQIHCPVTERHFWALVTPRSWYCRPEA
SIO_010081: soat2
subclass of: SO_0000673
so part of: soat2
location: join(294373..294457,296476..296534,299852..299988,301547..301606,306128..306235,307287..307569,307970..308045,312060..312144,314535..314580,314853..314982,318093..318190,319069..319167,320371..320506,320995..321140,322142..322198)
location: region:294373-322198:1
so has part: feature:294373-294457:1:exon
so has part: feature:296476-296534:1:exon
so has part: feature:299852-299988:1:exon
so has part: feature:301547-301606:1:exon
so has part: feature:306128-306235:1:exon
so has part: feature:307287-307569:1:exon
so has part: feature:307970-308045:1:exon
so has part: feature:312060-312144:1:exon
so has part: feature:314535-314580:1:exon
so has part: feature:314853-314982:1:exon
so has part: feature:318093-318190:1:exon
so has part: feature:319069-319167:1:exon
so has part: feature:320371-320506:1:exon
so has part: feature:320995-321140:1:exon
so has part: feature:322142-322198:1:exon

XP_032871587.1
type: Protein
SIO_000068: ncbiprotein

position:294373:1
position: 294373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322198:1
position: 322198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294373-294457:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:296476-296534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299852-299988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301547-301606:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306128-306235:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307287-307569:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307970-308045:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:312060-312144:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:314535-314580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314853-314982:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318093-318190:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319069-319167:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320371-320506:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320995-321140:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322142-322198:1:exon

soat2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: soat2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterol O-acyltransferase 2 isoform X1
translation: MNECMEESKVRERKKQSKENSMQNAAGNDSADHGNDLDHPIAWKKHIKDMKVELLDQFKGHLSELLDRAAEESIESYSHYKQETKSQESGHRNRGKNIATLKGKVFVNRCSILDELFENPHIQTIYHMFIALFIVFVVSTMAVEFIDEGRLILDFDMLVYAFGKFPRVFVTWTCLFLYTLTVPYKALDMWGSSYQLARYPRLATLALGLVLVVCQVCVLGIYPIYTVIHYQLPPASRFIVILEQLRLAMKSYSYIRENVPKVLKAKRSQGEVLQMPAFSCYLYFLFCPTLIYRDSYPRTPKIRWKYVALNFAQALGCLFYLYFILVRLCIPVFTNMSKQPFSTKTLVLSIFNATLPGTFILLLFFYSFLHCWLNAFAEMLRFGDRMFYKDWWNSTSFANYYRTWNVVVHDWLYNYTYTDLVWILGKRFRVAAMLSVFILSAMVHEYVLTLCLGYFYPVMFCLFAILGVFFNFIFNDSRTGPGWNIMMWVFLFIGQGIQVCLYCQEWYAQIHCPVTERHFWALVTPRSWYCRPEA
SIO_010081: soat2
subclass of: SO_0000673
so part of: soat2
location: join(294373..294457,296476..296534,299852..299988,301547..301606,306128..306235,307287..307569,307970..308045,312060..312144,314535..314580,314853..314982,318093..318190,319069..319167,320371..320506,320995..321140,322142..322198)
location: region:294373-322198:1
so has part: feature:294373-294457:1:exon
so has part: feature:296476-296534:1:exon
so has part: feature:299852-299988:1:exon
so has part: feature:301547-301606:1:exon
so has part: feature:306128-306235:1:exon
so has part: feature:307287-307569:1:exon
so has part: feature:307970-308045:1:exon
so has part: feature:312060-312144:1:exon
so has part: feature:314535-314580:1:exon
so has part: feature:314853-314982:1:exon
so has part: feature:318093-318190:1:exon
so has part: feature:319069-319167:1:exon
so has part: feature:320371-320506:1:exon
so has part: feature:320995-321140:1:exon
so has part: feature:322142-322198:1:exon

XP_032871588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294373-294457:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:296476-296534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299852-299988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301547-301606:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306128-306235:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307287-307569:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307970-308045:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:312060-312144:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:314535-314580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314853-314982:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318093-318190:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319069-319167:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320371-320506:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320995-321140:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322142-322198:1:exon

soat2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: soat2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterol O-acyltransferase 2 isoform X2
translation: MNAWKNPKSGRGRSNPKKTACKMLQEMILQIMAMTSITQLPGRNILSELFENPHIQTIYHMFIALFIVFVVSTMAVEFIDEGRLILDFDMLVYAFGKFPRVFVTWTCLFLYTLTVPYKALDMWGSSYQLARYPRLATLALGLVLVVCQVCVLGIYPIYTVIHYQLPPASRFIVILEQLRLAMKSYSYIRENVPKVLKAKRSQGEVLQMPAFSCYLYFLFCPTLIYRDSYPRTPKIRWKYVALNFAQALGCLFYLYFILVRLCIPVFTNMSKQPFSTKTLVLSIFNATLPGTFILLLFFYSFLHCWLNAFAEMLRFGDRMFYKDWWNSTSFANYYRTWNVVVHDWLYNYTYTDLVWILGKRFRVAAMLSVFILSAMVHEYVLTLCLGYFYPVMFCLFAILGVFFNFIFNDSRTGPGWNIMMWVFLFIGQGIQVCLYCQEWYAQIHCPVTERHFWALVTPRSWYCRPEA
SIO_010081: soat2
subclass of: SO_0000673
so part of: soat2
location: join(294377..294457,296476..296534,306128..306235,307287..307569,307970..308045,312060..312144,314535..314580,314853..314982,318093..318190,319069..319167,320371..320506,320995..321140,322142..322198)
location: region:294377-322198:1
so has part: feature:294377-294457:1:exon
so has part: feature:296476-296534:1:exon
so has part: feature:306128-306235:1:exon
so has part: feature:307287-307569:1:exon
so has part: feature:307970-308045:1:exon
so has part: feature:312060-312144:1:exon
so has part: feature:314535-314580:1:exon
so has part: feature:314853-314982:1:exon
so has part: feature:318093-318190:1:exon
so has part: feature:319069-319167:1:exon
so has part: feature:320371-320506:1:exon
so has part: feature:320995-321140:1:exon
so has part: feature:322142-322198:1:exon

XP_032871589.1
type: Protein
SIO_000068: ncbiprotein

position:294377:1
position: 294377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294377-294457:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:296476-296534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306128-306235:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307287-307569:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307970-308045:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312060-312144:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:314535-314580:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314853-314982:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:318093-318190:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:319069-319167:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320371-320506:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320995-321140:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322142-322198:1:exon

LOC116968805
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 316888..458320
location: region:316888-458320:1
so has part: feature:316888-458320:1:exon
subclass of: SO_0000010

116968805
type: Gene
SIO_000068: ncbigene

position:316888:1
position: 316888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458320:1
position: 458320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316888-458320:1:exon

LOC116968805
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968805
product: formin-like protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033015694.1
SIO_010081: LOC116968805
subclass of: SO_0000673
so part of: LOC116968805
location: join(316888..316892,331444..331577,387201..387284,387973..388053,389952..390028,402018..402101,404980..405132,411571..411679,411817..411893,413328..413421,413715..413789,416391..416501,419104..419253,420909..421010,421827..422082,424337..424423,426481..426605,428571..428773,431581..431815,433652..433720,435478..435558,442005..442134,445429..445592,449465..449566,450288..450383,451976..452099,453555..453680,454148..458320)
location: region:316888-458320:1
so has part: feature:316888-316892:1:exon
so has part: feature:331444-331577:1:exon
so has part: feature:387201-387284:1:exon
so has part: feature:387973-388053:1:exon
so has part: feature:389952-390028:1:exon
so has part: feature:402018-402101:1:exon
so has part: feature:404980-405132:1:exon
so has part: feature:411571-411679:1:exon
so has part: feature:411817-411893:1:exon
so has part: feature:413328-413421:1:exon
so has part: feature:413715-413789:1:exon
so has part: feature:416391-416501:1:exon
so has part: feature:419104-419253:1:exon
so has part: feature:420909-421010:1:exon
so has part: feature:421827-422082:1:exon
so has part: feature:424337-424423:1:exon
so has part: feature:426481-426605:1:exon
so has part: feature:428571-428773:1:exon
so has part: feature:431581-431815:1:exon
so has part: feature:433652-433720:1:exon
so has part: feature:435478-435558:1:exon
so has part: feature:442005-442134:1:exon
so has part: feature:445429-445592:1:exon
so has part: feature:449465-449566:1:exon
so has part: feature:450288-450383:1:exon
so has part: feature:451976-452099:1:exon
so has part: feature:453555-453680:1:exon
so has part: feature:454148-458320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:316888-316892:1:exon

position:316892:1
position: 316892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:331444-331577:1:exon

position:331444:1
position: 331444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331577:1
position: 331577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:387201-387284:1:exon

position:387201:1
position: 387201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387284:1
position: 387284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:387973-388053:1:exon

position:387973:1
position: 387973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388053:1
position: 388053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:389952-390028:1:exon

position:389952:1
position: 389952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390028:1
position: 390028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:402018-402101:1:exon

position:402018:1
position: 402018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402101:1
position: 402101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:404980-405132:1:exon

position:404980:1
position: 404980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405132:1
position: 405132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:411571-411679:1:exon

position:411571:1
position: 411571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411679:1
position: 411679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:411817-411893:1:exon

position:411817:1
position: 411817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411893:1
position: 411893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:413328-413421:1:exon

position:413328:1
position: 413328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413421:1
position: 413421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:413715-413789:1:exon

position:413715:1
position: 413715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413789:1
position: 413789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:416391-416501:1:exon

position:416391:1
position: 416391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416501:1
position: 416501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:419104-419253:1:exon

position:419104:1
position: 419104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419253:1
position: 419253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:420909-421010:1:exon

position:420909:1
position: 420909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421010:1
position: 421010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:421827-422082:1:exon

position:421827:1
position: 421827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422082:1
position: 422082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:424337-424423:1:exon

position:424337:1
position: 424337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424423:1
position: 424423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:426481-426605:1:exon

position:426481:1
position: 426481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426605:1
position: 426605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:428571-428773:1:exon

position:428571:1
position: 428571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428773:1
position: 428773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:431581-431815:1:exon

position:431581:1
position: 431581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431815:1
position: 431815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:433652-433720:1:exon

position:433652:1
position: 433652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433720:1
position: 433720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:435478-435558:1:exon

position:435478:1
position: 435478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435558:1
position: 435558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:442005-442134:1:exon

position:442005:1
position: 442005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442134:1
position: 442134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:445429-445592:1:exon

position:445429:1
position: 445429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445592:1
position: 445592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:449465-449566:1:exon

position:449465:1
position: 449465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449566:1
position: 449566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:450288-450383:1:exon

position:450288:1
position: 450288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450383:1
position: 450383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:451976-452099:1:exon

position:451976:1
position: 451976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452099:1
position: 452099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:453555-453680:1:exon

position:453555:1
position: 453555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453680:1
position: 453680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:454148-458320:1:exon

position:454148:1
position: 454148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968805
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968805
product: formin-like protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033015695.1
SIO_010081: LOC116968805
subclass of: SO_0000673
so part of: LOC116968805
location: join(331300..331577,387201..387284,387973..388053,389952..390028,402018..402101,411571..411679,411817..411893,413328..413421,413715..413789,416391..416501,419104..419253,420909..421010,421827..422082,424337..424423,426481..426605,428571..428773,431581..431815,433652..433720,435478..435558,442005..442134,445429..445592,449465..449566,450288..450383,451976..452099,453555..453680,454148..458320)
location: region:331300-458320:1
so has part: feature:331300-331577:1:exon
so has part: feature:387201-387284:1:exon
so has part: feature:387973-388053:1:exon
so has part: feature:389952-390028:1:exon
so has part: feature:402018-402101:1:exon
so has part: feature:411571-411679:1:exon
so has part: feature:411817-411893:1:exon
so has part: feature:413328-413421:1:exon
so has part: feature:413715-413789:1:exon
so has part: feature:416391-416501:1:exon
so has part: feature:419104-419253:1:exon
so has part: feature:420909-421010:1:exon
so has part: feature:421827-422082:1:exon
so has part: feature:424337-424423:1:exon
so has part: feature:426481-426605:1:exon
so has part: feature:428571-428773:1:exon
so has part: feature:431581-431815:1:exon
so has part: feature:433652-433720:1:exon
so has part: feature:435478-435558:1:exon
so has part: feature:442005-442134:1:exon
so has part: feature:445429-445592:1:exon
so has part: feature:449465-449566:1:exon
so has part: feature:450288-450383:1:exon
so has part: feature:451976-452099:1:exon
so has part: feature:453555-453680:1:exon
so has part: feature:454148-458320:1:exon

position:331300:1
position: 331300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331300-331577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387201-387284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387973-388053:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389952-390028:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:402018-402101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411571-411679:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:411817-411893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413328-413421:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413715-413789:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416391-416501:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:419104-419253:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:420909-421010:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:421827-422082:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:424337-424423:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:426481-426605:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:428571-428773:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:431581-431815:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:433652-433720:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:435478-435558:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:442005-442134:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:445429-445592:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:449465-449566:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:450288-450383:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:451976-452099:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:453555-453680:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:454148-458320:1:exon

LOC116968805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: formin-like protein 3 isoform X1
translation: MGNTGSLDVQTSLSGQTMPLKLPMPEQCDLEERFAMVLNSMNLPPDKARLLRQYDNEKKWDLICDQERFQVKNPPHTYIQKLKSYLDPGVTRKKFRRRVQESTKVLRELEISLRTNYIGWVREFLNDANQGLNVLVDYLSFAQCAVMFDIDLVENGDDGALDKPKPWGRSIEDLHQSNVLPLAFSNSLSRSARQSILRYNTLPDRKFLKNSRLVCQKDDVHVCIMCLRAVMNYQYGFNLVMSHPHAVNEIALSLNNKNPRTKALVLELLAAVCLVRGGHEIILSAFDHFKEVCKEKHRFENLMEYFRNEDTNIDFMVACMQFINIVVHSVEDMNFRVHLQFEFTKLGLDEFLEKSKHTESDKLQVQIQAYLDNVFDVGGLLEDAETKNAALEKVDELEEHMSHLAEKLQELENENMMRVAELEKQLLYQDNELETIKETYKDASSQVHTLRKMIKEKEEAFQRQFHLGRQMAGLQHGLLADCPDGDPSLLSRSSMDFELIPSVPPSPTPPMPPPPPLAPPLPGQVPAPPPPPSAPPLPGSSLSAILSHGLSAIRIKKAIKTKFRLPVFNWMALKPNQINGTVFTEIDDEKILEELDLDEFEDLFKTKAQGPSIEVSCQKSKSAQKALSKVMLLETNRAKNLAITLRKAGKTTEEICRAIQMYDLKTLPLDFVECLNRFLPLENEVKLLKQYEKERKPLDDLSNEDRFMMHFSKIERLAQRMTIMTFVGNFAENIQMLNPQLNAIIAASMSIKTSQKLKAMLEIILALGNYMNSSKRGAVYGFKLQSLDLLSDTKSTDRKLTLLHYIAIVVKRKYCNIATFWNELHYIEKAAAVSLENVLLDVKEMGHNMELVKRESNKHEHNLVLKDFLSINEGKLEKLQRDSKTAQEAYNKVVVYFGESAKTTPPSVFFPVFVRFVKSYKEAEQQNELRKKQEQALREKMLAQEAKLQQEQKSPCPRNKRQHQELIAELRRRQVKEHPAVYEGKDGTIEDIITVLKSVPFTARTAKRGSRFFCETTLCDESNC
SIO_010081: LOC116968805
subclass of: SO_0000673
so part of: LOC116968805
location: join(331464..331577,387201..387284,387973..388053,389952..390028,402018..402101,404980..405132,411571..411679,411817..411893,413328..413421,413715..413789,416391..416501,419104..419253,420909..421010,421827..422082,424337..424423,426481..426605,428571..428773,431581..431815,433652..433720,435478..435558,442005..442134,445429..445592,449465..449566,450288..450383,451976..452099,453555..453646)
location: region:331464-453646:1
so has part: feature:331464-331577:1:exon
so has part: feature:387201-387284:1:exon
so has part: feature:387973-388053:1:exon
so has part: feature:389952-390028:1:exon
so has part: feature:402018-402101:1:exon
so has part: feature:404980-405132:1:exon
so has part: feature:411571-411679:1:exon
so has part: feature:411817-411893:1:exon
so has part: feature:413328-413421:1:exon
so has part: feature:413715-413789:1:exon
so has part: feature:416391-416501:1:exon
so has part: feature:419104-419253:1:exon
so has part: feature:420909-421010:1:exon
so has part: feature:421827-422082:1:exon
so has part: feature:424337-424423:1:exon
so has part: feature:426481-426605:1:exon
so has part: feature:428571-428773:1:exon
so has part: feature:431581-431815:1:exon
so has part: feature:433652-433720:1:exon
so has part: feature:435478-435558:1:exon
so has part: feature:442005-442134:1:exon
so has part: feature:445429-445592:1:exon
so has part: feature:449465-449566:1:exon
so has part: feature:450288-450383:1:exon
so has part: feature:451976-452099:1:exon
so has part: feature:453555-453646:1:exon

XP_032871585.1
type: Protein
SIO_000068: ncbiprotein

position:331464:1
position: 331464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453646:1
position: 453646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331464-331577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387201-387284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387973-388053:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389952-390028:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:402018-402101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404980-405132:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:411571-411679:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:411817-411893:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413328-413421:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:413715-413789:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:416391-416501:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:419104-419253:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:420909-421010:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:421827-422082:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:424337-424423:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:426481-426605:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:428571-428773:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:431581-431815:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:433652-433720:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:435478-435558:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:442005-442134:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:445429-445592:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:449465-449566:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:450288-450383:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:451976-452099:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:453555-453646:1:exon

LOC116968805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: formin-like protein 3 isoform X2
translation: MGNTGSLDVQTSLSGQTMPLKLPMPEQCDLEERFAMVLNSMNLPPDKARLLRQYDNEKKWDLICDQERFQVKNPPHTYIQKLKSYLDPGVTRKKFRRRVQESTKVLRELEISLRTNYIGWVREFLNDANQGLNVLVDYLSFAQCAVIYNTLPDRKFLKNSRLVCQKDDVHVCIMCLRAVMNYQYGFNLVMSHPHAVNEIALSLNNKNPRTKALVLELLAAVCLVRGGHEIILSAFDHFKEVCKEKHRFENLMEYFRNEDTNIDFMVACMQFINIVVHSVEDMNFRVHLQFEFTKLGLDEFLEKSKHTESDKLQVQIQAYLDNVFDVGGLLEDAETKNAALEKVDELEEHMSHLAEKLQELENENMMRVAELEKQLLYQDNELETIKETYKDASSQVHTLRKMIKEKEEAFQRQFHLGRQMAGLQHGLLADCPDGDPSLLSRSSMDFELIPSVPPSPTPPMPPPPPLAPPLPGQVPAPPPPPSAPPLPGSSLSAILSHGLSAIRIKKAIKTKFRLPVFNWMALKPNQINGTVFTEIDDEKILEELDLDEFEDLFKTKAQGPSIEVSCQKSKSAQKALSKVMLLETNRAKNLAITLRKAGKTTEEICRAIQMYDLKTLPLDFVECLNRFLPLENEVKLLKQYEKERKPLDDLSNEDRFMMHFSKIERLAQRMTIMTFVGNFAENIQMLNPQLNAIIAASMSIKTSQKLKAMLEIILALGNYMNSSKRGAVYGFKLQSLDLLSDTKSTDRKLTLLHYIAIVVKRKYCNIATFWNELHYIEKAAAVSLENVLLDVKEMGHNMELVKRESNKHEHNLVLKDFLSINEGKLEKLQRDSKTAQEAYNKVVVYFGESAKTTPPSVFFPVFVRFVKSYKEAEQQNELRKKQEQALREKMLAQEAKLQQEQKSPCPRNKRQHQELIAELRRRQVKEHPAVYEGKDGTIEDIITVLKSVPFTARTAKRGSRFFCETTLCDESNC
SIO_010081: LOC116968805
subclass of: SO_0000673
so part of: LOC116968805
location: join(331464..331577,387201..387284,387973..388053,389952..390028,402018..402101,411571..411679,411817..411893,413328..413421,413715..413789,416391..416501,419104..419253,420909..421010,421827..422082,424337..424423,426481..426605,428571..428773,431581..431815,433652..433720,435478..435558,442005..442134,445429..445592,449465..449566,450288..450383,451976..452099,453555..453646)
location: region:331464-453646:1
so has part: feature:331464-331577:1:exon
so has part: feature:387201-387284:1:exon
so has part: feature:387973-388053:1:exon
so has part: feature:389952-390028:1:exon
so has part: feature:402018-402101:1:exon
so has part: feature:411571-411679:1:exon
so has part: feature:411817-411893:1:exon
so has part: feature:413328-413421:1:exon
so has part: feature:413715-413789:1:exon
so has part: feature:416391-416501:1:exon
so has part: feature:419104-419253:1:exon
so has part: feature:420909-421010:1:exon
so has part: feature:421827-422082:1:exon
so has part: feature:424337-424423:1:exon
so has part: feature:426481-426605:1:exon
so has part: feature:428571-428773:1:exon
so has part: feature:431581-431815:1:exon
so has part: feature:433652-433720:1:exon
so has part: feature:435478-435558:1:exon
so has part: feature:442005-442134:1:exon
so has part: feature:445429-445592:1:exon
so has part: feature:449465-449566:1:exon
so has part: feature:450288-450383:1:exon
so has part: feature:451976-452099:1:exon
so has part: feature:453555-453646:1:exon

XP_032871586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331464-331577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387201-387284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387973-388053:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389952-390028:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:402018-402101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411571-411679:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:411817-411893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413328-413421:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413715-413789:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416391-416501:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:419104-419253:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:420909-421010:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:421827-422082:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:424337-424423:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:426481-426605:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:428571-428773:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:431581-431815:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:433652-433720:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:435478-435558:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:442005-442134:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:445429-445592:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:449465-449566:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:450288-450383:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:451976-452099:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:453555-453646:1:exon

cd63
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: cd63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 494989..542261
location: region:494989-542261:1
so has part: feature:494989-542261:1:exon
subclass of: SO_0000010

116968830
type: Gene
SIO_000068: ncbigene

position:494989:1
position: 494989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542261:1
position: 542261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494989-542261:1:exon

cd63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cd63
product: CD63 molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033015753.1
SIO_010081: cd63
subclass of: SO_0000673
so part of: cd63
location: join(494989..495120,495464..495558,525907..526095,531994..532068,532796..532888,534771..534902,537070..537153,540323..542261)
location: region:494989-542261:1
so has part: feature:494989-495120:1:exon
so has part: feature:495464-495558:1:exon
so has part: feature:525907-526095:1:exon
so has part: feature:531994-532068:1:exon
so has part: feature:532796-532888:1:exon
so has part: feature:534771-534902:1:exon
so has part: feature:537070-537153:1:exon
so has part: feature:540323-542261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:494989-495120:1:exon

position:495120:1
position: 495120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:495464-495558:1:exon

position:495464:1
position: 495464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495558:1
position: 495558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:525907-526095:1:exon

position:525907:1
position: 525907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526095:1
position: 526095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:531994-532068:1:exon

position:531994:1
position: 531994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532068:1
position: 532068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:532796-532888:1:exon

position:532796:1
position: 532796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532888:1
position: 532888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:534771-534902:1:exon

position:534771:1
position: 534771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534902:1
position: 534902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:537070-537153:1:exon

position:537070:1
position: 537070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537153:1
position: 537153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:540323-542261:1:exon

position:540323:1
position: 540323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cd63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cd63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD63 antigen
translation: MTLEGGMKCVKYLMFVFNFLFWISGIALIVVGILVQTKVNGTLHITSVAASGAPIVIIVVGVIINFVAFFGCCGAWNENYCMVTTFTILLVLIFLVEIAAAIAGYVFKDEIRDAFEKTFNETMTNYNQSANAVNIDNLQKKFKCCGAAGYADWFAQMPGRVPDSCCKNFTHNCGRVTTAAAIYQQGCVALIKEWLKNNIVIVAGVALGIAIFQILGIVFACILMKGIKSGYEVM
SIO_010081: cd63
subclass of: SO_0000673
so part of: cd63
location: join(495493..495558,525907..526095,531994..532068,532796..532888,534771..534902,537070..537153,540323..540388)
location: region:495493-540388:1
so has part: feature:495493-495558:1:exon
so has part: feature:525907-526095:1:exon
so has part: feature:531994-532068:1:exon
so has part: feature:532796-532888:1:exon
so has part: feature:534771-534902:1:exon
so has part: feature:537070-537153:1:exon
so has part: feature:540323-540388:1:exon

XP_032871644.1
type: Protein
SIO_000068: ncbiprotein

position:495493:1
position: 495493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540388:1
position: 540388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495493-495558:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525907-526095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531994-532068:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532796-532888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534771-534902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537070-537153:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540323-540388:1:exon

LOC116968802
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968802
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 552318..560158
location: region:552318-560158:1
so has part: feature:552318-560158:1:exon
subclass of: SO_0000011

116968802
type: Gene
SIO_000068: ncbigene

position:552318:1
position: 552318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560158:1
position: 560158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552318-560158:1:exon

LOC116968802
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968802
product: uncharacterized LOC116968802
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004410533.1
SIO_010081: LOC116968802
subclass of: SO_0000673
so part of: LOC116968802
location: join(552318..552327,556234..556239,560082..560158)
location: region:552318-560158:1
so has part: feature:552318-552327:1:exon
so has part: feature:556234-556239:1:exon
so has part: feature:560082-560158:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552318-552327:1:exon

position:552327:1
position: 552327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:556234-556239:1:exon

position:556234:1
position: 556234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556239:1
position: 556239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:560082-560158:1:exon

position:560082:1
position: 560082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rdh5
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rdh5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(563615..572429)
location: region:563615-572429:-1
so has part: feature:563615-572429:-1:exon
subclass of: SO_0000010

116968801
type: Gene
SIO_000068: ncbigene

position:563615:-1
position: 563615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572429:-1
position: 572429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563615-572429:-1:exon

rdh5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rdh5
product: retinol dehydrogenase 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033015691.1
SIO_010081: rdh5
subclass of: SO_0000673
so part of: rdh5
location: complement(join(563615..563957,566693..566856,567731..567989,569950..570280,572369..572429))
location: region:563615-572429:-1
so has part: feature:572369-572429:-1:exon
so has part: feature:569950-570280:-1:exon
so has part: feature:567731-567989:-1:exon
so has part: feature:566693-566856:-1:exon
so has part: feature:563615-563957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:572369-572429:-1:exon

position:572369:-1
position: 572369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:569950-570280:-1:exon

position:569950:-1
position: 569950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570280:-1
position: 570280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:567731-567989:-1:exon

position:567731:-1
position: 567731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567989:-1
position: 567989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:566693-566856:-1:exon

position:566693:-1
position: 566693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566856:-1
position: 566856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:563615-563957:-1:exon

position:563957:-1
position: 563957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rdh5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rdh5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 5
translation: MWLYLLSVVLLLAFGWLIRDRQKIGDVKDKYVLITGCDSGFGSLLAKRLDHQGFCVLASCLTQKGVDSMHRGNSSRLKAVLLDVTDRVSIQKTADWVQAQVGEKGLWGLVNNAGRAVPIGPTEWMKMEDYHAVLGVNLLGLMEVTLTFLPLVKKARGRIVNVASVMARISFAGGGYCLSKCGVESFSDSLRRDMQNFGVQVSIIEPGFFRTAVTNLECIEKDLHRLWDRLSPEVRESYGQKYFEKYVQVQRFSMNVLCDSDLSKVTDCMEHALTARHARTRYAAGWDAKLFWIPLSYMPTILADFLLSALLPKPSQSVR
SIO_010081: rdh5
subclass of: SO_0000673
so part of: rdh5
location: complement(join(563734..563957,566693..566856,567731..567989,569950..570262))
location: region:563734-570262:-1
so has part: feature:569950-570262:-1:exon
so has part: feature:567731-567989:-1:exon
so has part: feature:566693-566856:-1:exon
so has part: feature:563734-563957:-1:exon

XP_032871582.1
type: Protein
SIO_000068: ncbiprotein

position:563734:-1
position: 563734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570262:-1
position: 570262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569950-570262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:567731-567989:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:566693-566856:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563734-563957:-1:exon

bloc1s1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: bloc1s1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(592392..651187)
location: region:592392-651187:-1
so has part: feature:592392-651187:-1:exon
subclass of: SO_0000010

116968741
type: Gene
SIO_000068: ncbigene

position:592392:-1
position: 592392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651187:-1
position: 651187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592392-651187:-1:exon

bloc1s1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: bloc1s1
product: biogenesis of lysosomal organelles complex 1 subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033015546.1
SIO_010081: bloc1s1
subclass of: SO_0000673
so part of: bloc1s1
location: complement(join(592392..592821,603391..603523,648974..649046,651032..651187))
location: region:592392-651187:-1
so has part: feature:651032-651187:-1:exon
so has part: feature:648974-649046:-1:exon
so has part: feature:603391-603523:-1:exon
so has part: feature:592392-592821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:651032-651187:-1:exon

position:651032:-1
position: 651032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:648974-649046:-1:exon

position:648974:-1
position: 648974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649046:-1
position: 649046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:603391-603523:-1:exon

position:603391:-1
position: 603391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603523:-1
position: 603523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:592392-592821:-1:exon

position:592821:-1
position: 592821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

bloc1s1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: bloc1s1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: biogenesis of lysosome-related organelles complex 1 subunit 1
translation: MLSRLLKDHQAKQNERKELQEKRRREAVVAATRLTEALVDHLNVGVAQAYVNQRKLDNEVKTLQIQAAQFAKQTQQWLGMVDNFNQALKEIGDVENWARSIEMDMRTIATALEYVYKGQLQPAT
SIO_010081: bloc1s1
subclass of: SO_0000673
so part of: bloc1s1
location: complement(join(592714..592821,603391..603523,648974..649046,651032..651092))
location: region:592714-651092:-1
so has part: feature:651032-651092:-1:exon
so has part: feature:648974-649046:-1:exon
so has part: feature:603391-603523:-1:exon
so has part: feature:592714-592821:-1:exon

XP_032871437.1
type: Protein
SIO_000068: ncbiprotein

position:592714:-1
position: 592714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651092:-1
position: 651092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651032-651092:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648974-649046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603391-603523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592714-592821:-1:exon

itga7
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: itga7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 666597..795777
location: region:666597-795777:1
so has part: feature:666597-795777:1:exon
subclass of: SO_0000010

116968792
type: Gene
SIO_000068: ncbigene

position:666597:1
position: 666597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795777:1
position: 795777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666597-795777:1:exon

itga7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: itga7
product: integrin subunit alpha 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033015652.1
SIO_010081: itga7
subclass of: SO_0000673
so part of: itga7
location: join(666597..666985,723447..723574,725058..725137,731226..731481,734170..734301,734947..735066,745006..745213,747587..747780,751123..751211,752584..752711,754012..754107,761139..761200,763886..764061,764646..764795,766932..767041,769306..769489,772839..772922,774183..774262,776246..776323,777792..777894,779898..780068,781857..781970,782692..782802,786199..786297,786937..787062,790943..791070,794957..795197)
location: region:666597-795197:1
so has part: feature:666597-666985:1:exon
so has part: feature:723447-723574:1:exon
so has part: feature:725058-725137:1:exon
so has part: feature:731226-731481:1:exon
so has part: feature:734170-734301:1:exon
so has part: feature:734947-735066:1:exon
so has part: feature:745006-745213:1:exon
so has part: feature:747587-747780:1:exon
so has part: feature:751123-751211:1:exon
so has part: feature:752584-752711:1:exon
so has part: feature:754012-754107:1:exon
so has part: feature:761139-761200:1:exon
so has part: feature:763886-764061:1:exon
so has part: feature:764646-764795:1:exon
so has part: feature:766932-767041:1:exon
so has part: feature:769306-769489:1:exon
so has part: feature:772839-772922:1:exon
so has part: feature:774183-774262:1:exon
so has part: feature:776246-776323:1:exon
so has part: feature:777792-777894:1:exon
so has part: feature:779898-780068:1:exon
so has part: feature:781857-781970:1:exon
so has part: feature:782692-782802:1:exon
so has part: feature:786199-786297:1:exon
so has part: feature:786937-787062:1:exon
so has part: feature:790943-791070:1:exon
so has part: feature:794957-795197:1:exon

position:795197:1
position: 795197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666597-666985:1:exon

position:666985:1
position: 666985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:723447-723574:1:exon

position:723447:1
position: 723447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723574:1
position: 723574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:725058-725137:1:exon

position:725058:1
position: 725058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725137:1
position: 725137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:731226-731481:1:exon

position:731226:1
position: 731226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731481:1
position: 731481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:734170-734301:1:exon

position:734170:1
position: 734170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734301:1
position: 734301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:734947-735066:1:exon

position:734947:1
position: 734947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735066:1
position: 735066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:745006-745213:1:exon

position:745006:1
position: 745006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745213:1
position: 745213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:747587-747780:1:exon

position:747587:1
position: 747587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747780:1
position: 747780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:751123-751211:1:exon

position:751123:1
position: 751123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751211:1
position: 751211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:752584-752711:1:exon

position:752584:1
position: 752584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752711:1
position: 752711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:754012-754107:1:exon

position:754012:1
position: 754012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754107:1
position: 754107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:761139-761200:1:exon

position:761139:1
position: 761139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761200:1
position: 761200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:763886-764061:1:exon

position:763886:1
position: 763886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764061:1
position: 764061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:764646-764795:1:exon

position:764646:1
position: 764646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764795:1
position: 764795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:766932-767041:1:exon

position:766932:1
position: 766932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767041:1
position: 767041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:769306-769489:1:exon

position:769306:1
position: 769306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769489:1
position: 769489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:772839-772922:1:exon

position:772839:1
position: 772839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772922:1
position: 772922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:774183-774262:1:exon

position:774183:1
position: 774183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774262:1
position: 774262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:776246-776323:1:exon

position:776246:1
position: 776246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776323:1
position: 776323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:777792-777894:1:exon

position:777792:1
position: 777792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777894:1
position: 777894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:779898-780068:1:exon

position:779898:1
position: 779898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780068:1
position: 780068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:781857-781970:1:exon

position:781857:1
position: 781857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781970:1
position: 781970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:782692-782802:1:exon

position:782692:1
position: 782692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782802:1
position: 782802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:786199-786297:1:exon

position:786199:1
position: 786199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786297:1
position: 786297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:786937-787062:1:exon

position:786937:1
position: 786937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787062:1
position: 787062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:790943-791070:1:exon

position:790943:1
position: 790943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791070:1
position: 791070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:794957-795197:1:exon

position:794957:1
position: 794957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

itga7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: itga7
product: integrin subunit alpha 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033015651.1
SIO_010081: itga7
subclass of: SO_0000673
so part of: itga7
location: join(666598..666985,723447..723574,725058..725137,731226..731481,734170..734301,734947..735066,745006..745213,747587..747780,751123..751211,752584..752711,754012..754107,761139..761200,763886..764061,764646..764795,766932..767041,769306..769489,772839..772922,774183..774262,776246..776323,777792..777894,779898..780068,781857..781970,782692..782802,786199..786297,786937..787062,794957..795777)
location: region:666598-795777:1
so has part: feature:666598-666985:1:exon
so has part: feature:723447-723574:1:exon
so has part: feature:725058-725137:1:exon
so has part: feature:731226-731481:1:exon
so has part: feature:734170-734301:1:exon
so has part: feature:734947-735066:1:exon
so has part: feature:745006-745213:1:exon
so has part: feature:747587-747780:1:exon
so has part: feature:751123-751211:1:exon
so has part: feature:752584-752711:1:exon
so has part: feature:754012-754107:1:exon
so has part: feature:761139-761200:1:exon
so has part: feature:763886-764061:1:exon
so has part: feature:764646-764795:1:exon
so has part: feature:766932-767041:1:exon
so has part: feature:769306-769489:1:exon
so has part: feature:772839-772922:1:exon
so has part: feature:774183-774262:1:exon
so has part: feature:776246-776323:1:exon
so has part: feature:777792-777894:1:exon
so has part: feature:779898-780068:1:exon
so has part: feature:781857-781970:1:exon
so has part: feature:782692-782802:1:exon
so has part: feature:786199-786297:1:exon
so has part: feature:786937-787062:1:exon
so has part: feature:794957-795777:1:exon

position:666598:1
position: 666598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666598-666985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723447-723574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725058-725137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731226-731481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:734170-734301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:734947-735066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:745006-745213:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:747587-747780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:751123-751211:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:752584-752711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:754012-754107:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:761139-761200:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:763886-764061:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:764646-764795:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:766932-767041:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:769306-769489:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:772839-772922:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:774183-774262:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:776246-776323:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:777792-777894:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:779898-780068:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:781857-781970:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:782692-782802:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:786199-786297:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:786937-787062:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:794957-795777:1:exon

itga7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: itga7
product: integrin subunit alpha 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033015653.1
SIO_010081: itga7
subclass of: SO_0000673
so part of: itga7
location: join(666600..666985,723447..723574,725058..725137,731226..731481,734170..734301,745006..745213,747587..747780,751123..751211,752584..752711,754012..754107,761139..761200,763886..764061,764646..764795,766932..767041,769306..769489,772839..772922,774183..774262,776246..776323,777792..777894,779898..780068,781857..781970,782692..782802,786199..786297,786937..787062,794957..795777)
location: region:666600-795777:1
so has part: feature:666600-666985:1:exon
so has part: feature:723447-723574:1:exon
so has part: feature:725058-725137:1:exon
so has part: feature:731226-731481:1:exon
so has part: feature:734170-734301:1:exon
so has part: feature:745006-745213:1:exon
so has part: feature:747587-747780:1:exon
so has part: feature:751123-751211:1:exon
so has part: feature:752584-752711:1:exon
so has part: feature:754012-754107:1:exon
so has part: feature:761139-761200:1:exon
so has part: feature:763886-764061:1:exon
so has part: feature:764646-764795:1:exon
so has part: feature:766932-767041:1:exon
so has part: feature:769306-769489:1:exon
so has part: feature:772839-772922:1:exon
so has part: feature:774183-774262:1:exon
so has part: feature:776246-776323:1:exon
so has part: feature:777792-777894:1:exon
so has part: feature:779898-780068:1:exon
so has part: feature:781857-781970:1:exon
so has part: feature:782692-782802:1:exon
so has part: feature:786199-786297:1:exon
so has part: feature:786937-787062:1:exon
so has part: feature:794957-795777:1:exon

position:666600:1
position: 666600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666600-666985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723447-723574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725058-725137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731226-731481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:734170-734301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:745006-745213:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:747587-747780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:751123-751211:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:752584-752711:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754012-754107:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:761139-761200:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:763886-764061:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:764646-764795:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:766932-767041:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:769306-769489:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:772839-772922:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:774183-774262:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776246-776323:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:777792-777894:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:779898-780068:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:781857-781970:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:782692-782802:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:786199-786297:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:786937-787062:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:794957-795777:1:exon

itga7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: itga7
product: integrin subunit alpha 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033015654.1
SIO_010081: itga7
subclass of: SO_0000673
so part of: itga7
location: join(666600..666985,723447..723574,725058..725137,731226..731481,734947..735066,745006..745213,747587..747780,751123..751211,752584..752711,754012..754107,761139..761200,763886..764061,764646..764795,766932..767041,769306..769489,772839..772922,774183..774262,776246..776323,777792..777894,779898..780068,781857..781970,782692..782802,786199..786297,786937..787062,794957..795777)
location: region:666600-795777:1
so has part: feature:666600-666985:1:exon
so has part: feature:723447-723574:1:exon
so has part: feature:725058-725137:1:exon
so has part: feature:731226-731481:1:exon
so has part: feature:734947-735066:1:exon
so has part: feature:745006-745213:1:exon
so has part: feature:747587-747780:1:exon
so has part: feature:751123-751211:1:exon
so has part: feature:752584-752711:1:exon
so has part: feature:754012-754107:1:exon
so has part: feature:761139-761200:1:exon
so has part: feature:763886-764061:1:exon
so has part: feature:764646-764795:1:exon
so has part: feature:766932-767041:1:exon
so has part: feature:769306-769489:1:exon
so has part: feature:772839-772922:1:exon
so has part: feature:774183-774262:1:exon
so has part: feature:776246-776323:1:exon
so has part: feature:777792-777894:1:exon
so has part: feature:779898-780068:1:exon
so has part: feature:781857-781970:1:exon
so has part: feature:782692-782802:1:exon
so has part: feature:786199-786297:1:exon
so has part: feature:786937-787062:1:exon
so has part: feature:794957-795777:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:666600-666985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723447-723574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725058-725137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731226-731481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:734947-735066:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:745006-745213:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:747587-747780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:751123-751211:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:752584-752711:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754012-754107:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:761139-761200:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:763886-764061:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:764646-764795:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:766932-767041:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:769306-769489:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:772839-772922:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:774183-774262:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776246-776323:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:777792-777894:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:779898-780068:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:781857-781970:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:782692-782802:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:786199-786297:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:786937-787062:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:794957-795777:1:exon

itga7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: itga7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-7 isoform X1
translation: MTPLLRVCWLLLAAQGSAFNLETTNTIAKEGERGSLFGFSVALHKQTSPDAQSWILIGAPQARAQSHQHANRTGGLFACPIITEDDDCDQVNIDNDVDLQRESKENQWLGVTVKSQGVGGKIVTCAHRYEVRQRVDQLAETRDMIGRCYVLNQDLKVKDELDGGDWKFCEGRTQGHQRFGYCQQGIAAGFTPDDHYILFGAPGTYNWKGNVRAELYSHSMVHMGIYDDGPYEVGDERRQEAELVPVPANSYLGLIFLSTTSSSDPDQLVYKTPDPAEKAARSPHDVTQHSYLGFSVDSGKGLIRQNELSVVSGAPRANHTGAVVILRKEGVNRLAPEHILWGEELGSSYGYAVATVDLNSDGWMDLVVGAPYFFDRKEEIGGAVYVYINQAGRLNRVSCIRLNGTKDSLFGLAVANIGDINQDGFGDIAVGAPYDEHGKVYIYHGNKFGLNTIPAQIIEGETVGVTKFGYSIDGGIDIDDNSYPDMVVGSLSDSAVLFRACPVINMTNRIYINPQQIDLELENCRLMAGICIDVRACFLYNSKPESYNPRIVLGFAIEADSPEVEGQTRRPPRVTFLKRSPSDAENQYTGEVVLRRQSLRNCVNVTMKLRENIRDKLRHIPVTLTYLIKDAKRTRKQADRQLAYLMPVLNADVSRTLREEVNFLREGCGPDKICQSNLQLKYRFGTRLNDAFQPLPLDEQGRQVFSFSDQNDIALEITVTNFPTDPRNPSKDGDDAHEAVLTANFPDTLSYSAFRSSQDKNLDCVANTNGSQAECEMGNPMKRNAEVTFYLILSIAPITIETTTLPIILQLTTISEQSDLSPITAIAHVMILLPLTLSGSFAHNYVNFGGEIVGESAIKSEDAVGNIVNYKLTVANTGKAVKTLSSAFLNIRWPHEISNGKWLLYPMKIEIEEDENVQCSPLHGINPLNLTFSNRSQADPLAERLHGEHGGQRQIVTQHTGAKKSLTLDCEQGTANCIVFQCPLKTLDTTVVKVRARLWNSTFLEEYASLSDIHLIIRADISVKSSIRNLKVQKAAAQVTLRIHPEKASAVYGETPWLIILIAVLAGILVLALLVFLLWKCGFFKRSRYNDTVPQYHAVRIGKEERQLHTDEKKTQYQKEWMTHWIDSDGYS
SIO_010081: itga7
subclass of: SO_0000673
so part of: itga7
location: join(666825..666985,723447..723574,725058..725137,731226..731481,734170..734301,734947..735066,745006..745213,747587..747780,751123..751211,752584..752711,754012..754107,761139..761200,763886..764061,764646..764795,766932..767041,769306..769489,772839..772922,774183..774262,776246..776323,777792..777894,779898..780068,781857..781970,782692..782802,786199..786297,786937..787062,794957..795115)
location: region:666825-795115:1
so has part: feature:666825-666985:1:exon
so has part: feature:723447-723574:1:exon
so has part: feature:725058-725137:1:exon
so has part: feature:731226-731481:1:exon
so has part: feature:734170-734301:1:exon
so has part: feature:734947-735066:1:exon
so has part: feature:745006-745213:1:exon
so has part: feature:747587-747780:1:exon
so has part: feature:751123-751211:1:exon
so has part: feature:752584-752711:1:exon
so has part: feature:754012-754107:1:exon
so has part: feature:761139-761200:1:exon
so has part: feature:763886-764061:1:exon
so has part: feature:764646-764795:1:exon
so has part: feature:766932-767041:1:exon
so has part: feature:769306-769489:1:exon
so has part: feature:772839-772922:1:exon
so has part: feature:774183-774262:1:exon
so has part: feature:776246-776323:1:exon
so has part: feature:777792-777894:1:exon
so has part: feature:779898-780068:1:exon
so has part: feature:781857-781970:1:exon
so has part: feature:782692-782802:1:exon
so has part: feature:786199-786297:1:exon
so has part: feature:786937-787062:1:exon
so has part: feature:794957-795115:1:exon

XP_032871542.1
type: Protein
SIO_000068: ncbiprotein

position:666825:1
position: 666825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795115:1
position: 795115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666825-666985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723447-723574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725058-725137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731226-731481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:734170-734301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:734947-735066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:745006-745213:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:747587-747780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:751123-751211:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:752584-752711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:754012-754107:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:761139-761200:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:763886-764061:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:764646-764795:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:766932-767041:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:769306-769489:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:772839-772922:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:774183-774262:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:776246-776323:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:777792-777894:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:779898-780068:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:781857-781970:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:782692-782802:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:786199-786297:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:786937-787062:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:794957-795115:1:exon

itga7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: itga7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-7 isoform X3
translation: MTPLLRVCWLLLAAQGSAFNLETTNTIAKEGERGSLFGFSVALHKQTSPDAQSWILIGAPQARAQSHQHANRTGGLFACPIITEDDDCDQVNIDNDVDLQRESKENQWLGVTVKSQGVGGKIVTCAHRYEVRQRVDQLAETRDMIGRCYVLNQDLKVKDELDGGDWKFCEGRTQGHQRFGYCQQGIAAGFTPDDHYILFGAPGTYNWKGNVRAELYSHSMVHMGIYDDGPYEVGDERRQEAELVPVPANSYLGFSVDSGKGLIRQNELSVVSGAPRANHTGAVVILRKEGVNRLAPEHILWGEELGSSYGYAVATVDLNSDGWMDLVVGAPYFFDRKEEIGGAVYVYINQAGRLNRVSCIRLNGTKDSLFGLAVANIGDINQDGFGDIAVGAPYDEHGKVYIYHGNKFGLNTIPAQIIEGETVGVTKFGYSIDGGIDIDDNSYPDMVVGSLSDSAVLFRACPVINMTNRIYINPQQIDLELENCRLMAGICIDVRACFLYNSKPESYNPRIVLGFAIEADSPEVEGQTRRPPRVTFLKRSPSDAENQYTGEVVLRRQSLRNCVNVTMKLRENIRDKLRHIPVTLTYLIKDAKRTRKQADRQLAYLMPVLNADVSRTLREEVNFLREGCGPDKICQSNLQLKYRFGTRLNDAFQPLPLDEQGRQVFSFSDQNDIALEITVTNFPTDPRNPSKDGDDAHEAVLTANFPDTLSYSAFRSSQDKNLDCVANTNGSQAECEMGNPMKRNAEVTFYLILSIAPITIETTTLPIILQLTTISEQSDLSPITAIAHVMILLPLTLSGSFAHNYVNFGGEIVGESAIKSEDAVGNIVNYKLTVANTGKAVKTLSSAFLNIRWPHEISNGKWLLYPMKIEIEEDENVQCSPLHGINPLNLTFSNRSQADPLAERLHGEHGGQRQIVTQHTGAKKSLTLDCEQGTANCIVFQCPLKTLDTTVVKVRARLWNSTFLEEYASLSDIHLIIRADISVKSSIRNLKVQKAAAQVTLRIHPEKASAVYGETPWLIILIAVLAGILVLALLVFLLWKCGFFKRSRYNDTVPQYHAVRIGKEERQLHTDEKKTQYQKEWMTHWIDSDGYS
SIO_010081: itga7
subclass of: SO_0000673
so part of: itga7
location: join(666825..666985,723447..723574,725058..725137,731226..731481,734170..734301,745006..745213,747587..747780,751123..751211,752584..752711,754012..754107,761139..761200,763886..764061,764646..764795,766932..767041,769306..769489,772839..772922,774183..774262,776246..776323,777792..777894,779898..780068,781857..781970,782692..782802,786199..786297,786937..787062,794957..795115)
location: region:666825-795115:1
so has part: feature:666825-666985:1:exon
so has part: feature:723447-723574:1:exon
so has part: feature:725058-725137:1:exon
so has part: feature:731226-731481:1:exon
so has part: feature:734170-734301:1:exon
so has part: feature:745006-745213:1:exon
so has part: feature:747587-747780:1:exon
so has part: feature:751123-751211:1:exon
so has part: feature:752584-752711:1:exon
so has part: feature:754012-754107:1:exon
so has part: feature:761139-761200:1:exon
so has part: feature:763886-764061:1:exon
so has part: feature:764646-764795:1:exon
so has part: feature:766932-767041:1:exon
so has part: feature:769306-769489:1:exon
so has part: feature:772839-772922:1:exon
so has part: feature:774183-774262:1:exon
so has part: feature:776246-776323:1:exon
so has part: feature:777792-777894:1:exon
so has part: feature:779898-780068:1:exon
so has part: feature:781857-781970:1:exon
so has part: feature:782692-782802:1:exon
so has part: feature:786199-786297:1:exon
so has part: feature:786937-787062:1:exon
so has part: feature:794957-795115:1:exon

XP_032871544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:666825-666985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723447-723574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725058-725137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731226-731481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:734170-734301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:745006-745213:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:747587-747780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:751123-751211:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:752584-752711:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754012-754107:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:761139-761200:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:763886-764061:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:764646-764795:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:766932-767041:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:769306-769489:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:772839-772922:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:774183-774262:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776246-776323:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:777792-777894:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:779898-780068:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:781857-781970:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:782692-782802:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:786199-786297:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:786937-787062:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:794957-795115:1:exon

itga7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: itga7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-7 isoform X4
translation: MTPLLRVCWLLLAAQGSAFNLETTNTIAKEGERGSLFGFSVALHKQTSPDAQSWILIGAPQARAQSHQHANRTGGLFACPIITEDDDCDQVNIDNDVDLQRESKENQWLGVTVKSQGVGGKIVTCAHRYEVRQRVDQLAETRDMIGRCYVLNQDLKVKDELDGGDWKFCEGRTQGHQRFGYCQQGIAAGFTPDDHYILFGAPGTYNWKGLIFLSTTSSSDPDQLVYKTPDPAEKAARSPHDVTQHSYLGFSVDSGKGLIRQNELSVVSGAPRANHTGAVVILRKEGVNRLAPEHILWGEELGSSYGYAVATVDLNSDGWMDLVVGAPYFFDRKEEIGGAVYVYINQAGRLNRVSCIRLNGTKDSLFGLAVANIGDINQDGFGDIAVGAPYDEHGKVYIYHGNKFGLNTIPAQIIEGETVGVTKFGYSIDGGIDIDDNSYPDMVVGSLSDSAVLFRACPVINMTNRIYINPQQIDLELENCRLMAGICIDVRACFLYNSKPESYNPRIVLGFAIEADSPEVEGQTRRPPRVTFLKRSPSDAENQYTGEVVLRRQSLRNCVNVTMKLRENIRDKLRHIPVTLTYLIKDAKRTRKQADRQLAYLMPVLNADVSRTLREEVNFLREGCGPDKICQSNLQLKYRFGTRLNDAFQPLPLDEQGRQVFSFSDQNDIALEITVTNFPTDPRNPSKDGDDAHEAVLTANFPDTLSYSAFRSSQDKNLDCVANTNGSQAECEMGNPMKRNAEVTFYLILSIAPITIETTTLPIILQLTTISEQSDLSPITAIAHVMILLPLTLSGSFAHNYVNFGGEIVGESAIKSEDAVGNIVNYKLTVANTGKAVKTLSSAFLNIRWPHEISNGKWLLYPMKIEIEEDENVQCSPLHGINPLNLTFSNRSQADPLAERLHGEHGGQRQIVTQHTGAKKSLTLDCEQGTANCIVFQCPLKTLDTTVVKVRARLWNSTFLEEYASLSDIHLIIRADISVKSSIRNLKVQKAAAQVTLRIHPEKASAVYGETPWLIILIAVLAGILVLALLVFLLWKCGFFKRSRYNDTVPQYHAVRIGKEERQLHTDEKKTQYQKEWMTHWIDSDGYS
SIO_010081: itga7
subclass of: SO_0000673
so part of: itga7
location: join(666825..666985,723447..723574,725058..725137,731226..731481,734947..735066,745006..745213,747587..747780,751123..751211,752584..752711,754012..754107,761139..761200,763886..764061,764646..764795,766932..767041,769306..769489,772839..772922,774183..774262,776246..776323,777792..777894,779898..780068,781857..781970,782692..782802,786199..786297,786937..787062,794957..795115)
location: region:666825-795115:1
so has part: feature:666825-666985:1:exon
so has part: feature:723447-723574:1:exon
so has part: feature:725058-725137:1:exon
so has part: feature:731226-731481:1:exon
so has part: feature:734947-735066:1:exon
so has part: feature:745006-745213:1:exon
so has part: feature:747587-747780:1:exon
so has part: feature:751123-751211:1:exon
so has part: feature:752584-752711:1:exon
so has part: feature:754012-754107:1:exon
so has part: feature:761139-761200:1:exon
so has part: feature:763886-764061:1:exon
so has part: feature:764646-764795:1:exon
so has part: feature:766932-767041:1:exon
so has part: feature:769306-769489:1:exon
so has part: feature:772839-772922:1:exon
so has part: feature:774183-774262:1:exon
so has part: feature:776246-776323:1:exon
so has part: feature:777792-777894:1:exon
so has part: feature:779898-780068:1:exon
so has part: feature:781857-781970:1:exon
so has part: feature:782692-782802:1:exon
so has part: feature:786199-786297:1:exon
so has part: feature:786937-787062:1:exon
so has part: feature:794957-795115:1:exon

XP_032871545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:666825-666985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723447-723574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725058-725137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731226-731481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:734947-735066:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:745006-745213:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:747587-747780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:751123-751211:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:752584-752711:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754012-754107:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:761139-761200:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:763886-764061:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:764646-764795:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:766932-767041:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:769306-769489:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:772839-772922:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:774183-774262:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776246-776323:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:777792-777894:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:779898-780068:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:781857-781970:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:782692-782802:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:786199-786297:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:786937-787062:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:794957-795115:1:exon

itga7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: itga7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-7 isoform X2
translation: MTPLLRVCWLLLAAQGSAFNLETTNTIAKEGERGSLFGFSVALHKQTSPDAQSWILIGAPQARAQSHQHANRTGGLFACPIITEDDDCDQVNIDNDVDLQRESKENQWLGVTVKSQGVGGKIVTCAHRYEVRQRVDQLAETRDMIGRCYVLNQDLKVKDELDGGDWKFCEGRTQGHQRFGYCQQGIAAGFTPDDHYILFGAPGTYNWKGNVRAELYSHSMVHMGIYDDGPYEVGDERRQEAELVPVPANSYLGLIFLSTTSSSDPDQLVYKTPDPAEKAARSPHDVTQHSYLGFSVDSGKGLIRQNELSVVSGAPRANHTGAVVILRKEGVNRLAPEHILWGEELGSSYGYAVATVDLNSDGWMDLVVGAPYFFDRKEEIGGAVYVYINQAGRLNRVSCIRLNGTKDSLFGLAVANIGDINQDGFGDIAVGAPYDEHGKVYIYHGNKFGLNTIPAQIIEGETVGVTKFGYSIDGGIDIDDNSYPDMVVGSLSDSAVLFRACPVINMTNRIYINPQQIDLELENCRLMAGICIDVRACFLYNSKPESYNPRIVLGFAIEADSPEVEGQTRRPPRVTFLKRSPSDAENQYTGEVVLRRQSLRNCVNVTMKLRENIRDKLRHIPVTLTYLIKDAKRTRKQADRQLAYLMPVLNADVSRTLREEVNFLREGCGPDKICQSNLQLKYRFGTRLNDAFQPLPLDEQGRQVFSFSDQNDIALEITVTNFPTDPRNPSKDGDDAHEAVLTANFPDTLSYSAFRSSQDKNLDCVANTNGSQAECEMGNPMKRNAEVTFYLILSIAPITIETTTLPIILQLTTISEQSDLSPITAIAHVMILLPLTLSGSFAHNYVNFGGEIVGESAIKSEDAVGNIVNYKLTVANTGKAVKTLSSAFLNIRWPHEISNGKWLLYPMKIEIEEDENVQCSPLHGINPLNLTFSNRSQADPLAERLHGEHGGQRQIVTQHTGAKKSLTLDCEQGTANCIVFQCPLKTLDTTVVKVRARLWNSTFLEEYASLSDIHLIIRADISVKSSIRNLKVQKAAAQVTLRIHPEKASAVYGETPWLIILIAVLAGILVLALLVFLLWKCGFFKRTSKEAKYETEYHRAHLQTQPSDQDKLATEA
SIO_010081: itga7
subclass of: SO_0000673
so part of: itga7
location: join(666825..666985,723447..723574,725058..725137,731226..731481,734170..734301,734947..735066,745006..745213,747587..747780,751123..751211,752584..752711,754012..754107,761139..761200,763886..764061,764646..764795,766932..767041,769306..769489,772839..772922,774183..774262,776246..776323,777792..777894,779898..780068,781857..781970,782692..782802,786199..786297,786937..787062,790943..791053)
location: region:666825-791053:1
so has part: feature:666825-666985:1:exon
so has part: feature:723447-723574:1:exon
so has part: feature:725058-725137:1:exon
so has part: feature:731226-731481:1:exon
so has part: feature:734170-734301:1:exon
so has part: feature:734947-735066:1:exon
so has part: feature:745006-745213:1:exon
so has part: feature:747587-747780:1:exon
so has part: feature:751123-751211:1:exon
so has part: feature:752584-752711:1:exon
so has part: feature:754012-754107:1:exon
so has part: feature:761139-761200:1:exon
so has part: feature:763886-764061:1:exon
so has part: feature:764646-764795:1:exon
so has part: feature:766932-767041:1:exon
so has part: feature:769306-769489:1:exon
so has part: feature:772839-772922:1:exon
so has part: feature:774183-774262:1:exon
so has part: feature:776246-776323:1:exon
so has part: feature:777792-777894:1:exon
so has part: feature:779898-780068:1:exon
so has part: feature:781857-781970:1:exon
so has part: feature:782692-782802:1:exon
so has part: feature:786199-786297:1:exon
so has part: feature:786937-787062:1:exon
so has part: feature:790943-791053:1:exon

XP_032871543.1
type: Protein
SIO_000068: ncbiprotein

position:791053:1
position: 791053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666825-666985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723447-723574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725058-725137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731226-731481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:734170-734301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:734947-735066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:745006-745213:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:747587-747780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:751123-751211:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:752584-752711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:754012-754107:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:761139-761200:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:763886-764061:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:764646-764795:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:766932-767041:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:769306-769489:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:772839-772922:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:774183-774262:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:776246-776323:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:777792-777894:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:779898-780068:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:781857-781970:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:782692-782802:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:786199-786297:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:786937-787062:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:790943-791053:1:exon

LOC116968744
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968744
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 823705..874804
location: region:823705-874804:1
so has part: feature:823705-874804:1:exon
subclass of: SO_0000010

116968744
type: Gene
SIO_000068: ncbigene

position:823705:1
position: 823705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874804:1
position: 874804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823705-874804:1:exon

LOC116968744
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968744
product: aryl hydrocarbon receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015552.1
SIO_010081: LOC116968744
subclass of: SO_0000673
so part of: LOC116968744
location: join(823705..823879,842119..842352,856038..856156,857845..857934,860865..860988,861873..862003,863819..864021,864891..865000,866472..866613,868159..869638,872821..874022,874443..874804)
location: region:823705-874804:1
so has part: feature:823705-823879:1:exon
so has part: feature:842119-842352:1:exon
so has part: feature:856038-856156:1:exon
so has part: feature:857845-857934:1:exon
so has part: feature:860865-860988:1:exon
so has part: feature:861873-862003:1:exon
so has part: feature:863819-864021:1:exon
so has part: feature:864891-865000:1:exon
so has part: feature:866472-866613:1:exon
so has part: feature:868159-869638:1:exon
so has part: feature:872821-874022:1:exon
so has part: feature:874443-874804:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:823705-823879:1:exon

position:823879:1
position: 823879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:842119-842352:1:exon

position:842119:1
position: 842119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842352:1
position: 842352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:856038-856156:1:exon

position:856038:1
position: 856038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856156:1
position: 856156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:857845-857934:1:exon

position:857845:1
position: 857845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857934:1
position: 857934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:860865-860988:1:exon

position:860865:1
position: 860865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860988:1
position: 860988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:861873-862003:1:exon

position:861873:1
position: 861873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862003:1
position: 862003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:863819-864021:1:exon

position:863819:1
position: 863819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864021:1
position: 864021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:864891-865000:1:exon

position:864891:1
position: 864891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865000:1
position: 865000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:866472-866613:1:exon

position:866472:1
position: 866472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866613:1
position: 866613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:868159-869638:1:exon

position:868159:1
position: 868159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869638:1
position: 869638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:872821-874022:1:exon

position:872821:1
position: 872821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874022:1
position: 874022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:874443-874804:1:exon

position:874443:1
position: 874443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968744
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968744
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor-like
translation: MLPETPVHLLRWQQKQVIEVNDASAVSGAVIQRHCSNVVAFSAPTMSAFISAQLRNEEDGPELSSCVCILVQPSVEQGVGNTTKSNPSKRHRDRLNVEFDNLLSLLPTTEDVAGRMDKLSVLRLSVSCLRLKRFFEVTLGQRKESPPTGQLGIHGMDRLFPNLGNSVLSEGDLVLQALNGFVLVVTAEGDIFYTSPTVQDYLGFHQTAVMHQPVFELIHPDDRDEFQRQLHWALNPSPLSNAQRTGAGAGTRRDVVVSYDPQQLPPENSTFMERTFVCKMRSLLNSSSGYVALSIEGRLKYLHGQNKRAEDGSLLPPQLALFAIATPLQVPSILEIRTRSALFQTKHKLDFSPVACDAKARIVLGYSELELCMRGSGYQFIHAHDMLYCADNHVRLMKTGESGLTIFRLLTKQNVWIWVQADARTVYKNGQPDCIIAKQRLLTDKEGMDHFQKRTMPFQLPFSTGEAALYDNSSPLLGLTNPFPPENGNPGMVQNGCVDPNSLLGAMMSQDQAVYISHPAVEPKYSFSRIGGAVASASAASTPCSPNGEHNVKKEDPSSKQEDDLLSILDDIFQSDNGDGLAGLPNVLESLAPEDLELMHWVENTLKMDMDTECSLNDMVTNDQVLSYVHESLKQKEMNGQSLHQPTGVKDNLGTGDQLPECSGMSQRQSNRSPQTASLHLHQSLPSSIPQQPSKARYLPQEATRRCNGAQRMPQQDLFQQQNMHWSHSRQQQYASGPMQQQYVQQHVLHKQRAARPSLQLQQHGQPRDRQLPAQYYNRQPHHYHQQSSDPSPSPVTGHNPAASTNCSVSYGYMRAAQSCRVNSQHNAPLFNSPSSAPPCVPAPPQSNRLDFSHPSSALASHAHETCSQMDWLAGANQPNGTAFPLFSSTAPCVGGKQTNLTAFHPATTVPLSHMNKCSHLHPEEQNSWCAVDLYKMAEDSKGILGFHPTMNGTPIFGNGSAQ
SIO_010081: LOC116968744
subclass of: SO_0000673
so part of: LOC116968744
location: join(823705..823879,842119..842352,856038..856156,857845..857934,860865..860988,861873..862003,863819..864021,864891..865000,866472..866613,868159..869638,872821..872904)
location: region:823705-872904:1
so has part: feature:823705-823879:1:exon
so has part: feature:842119-842352:1:exon
so has part: feature:856038-856156:1:exon
so has part: feature:857845-857934:1:exon
so has part: feature:860865-860988:1:exon
so has part: feature:861873-862003:1:exon
so has part: feature:863819-864021:1:exon
so has part: feature:864891-865000:1:exon
so has part: feature:866472-866613:1:exon
so has part: feature:868159-869638:1:exon
so has part: feature:872821-872904:1:exon

XP_032871443.1
type: Protein
SIO_000068: ncbiprotein

position:872904:1
position: 872904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823705-823879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842119-842352:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856038-856156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857845-857934:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860865-860988:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861873-862003:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:863819-864021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:864891-865000:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:866472-866613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:868159-869638:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872821-872904:1:exon

scn8a
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: scn8a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1060603..1164070)
location: region:1060603-1164070:-1
so has part: feature:1060603-1164070:-1:exon
subclass of: SO_0000010

116968794
type: Gene
SIO_000068: ncbigene

position:1060603:-1
position: 1060603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164070:-1
position: 1164070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060603-1164070:-1:exon

scn8a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: scn8a
product: sodium voltage-gated channel alpha subunit 8, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033015660.1
SIO_010081: scn8a
subclass of: SO_0000673
so part of: scn8a
location: complement(join(1060603..1062148,1062928..1063198,1065703..1065807,1067716..1067853,1069874..1069927,1072179..1072463,1087862..1088035,1089388..1089542,1090752..1090872,1092209..1092679,1094214..1094570,1095845..1096018,1099785..1100023,1101008..1101140,1115815..1116165,1119630..1119911,1121280..1121486,1125258..1125399,1131200..1131263,1133834..1134061,1143994..1144085,1151342..1151470,1155676..1155765,1163727..1164070))
location: region:1060603-1164070:-1
so has part: feature:1163727-1164070:-1:exon
so has part: feature:1155676-1155765:-1:exon
so has part: feature:1151342-1151470:-1:exon
so has part: feature:1143994-1144085:-1:exon
so has part: feature:1133834-1134061:-1:exon
so has part: feature:1131200-1131263:-1:exon
so has part: feature:1125258-1125399:-1:exon
so has part: feature:1121280-1121486:-1:exon
so has part: feature:1119630-1119911:-1:exon
so has part: feature:1115815-1116165:-1:exon
so has part: feature:1101008-1101140:-1:exon
so has part: feature:1099785-1100023:-1:exon
so has part: feature:1095845-1096018:-1:exon
so has part: feature:1094214-1094570:-1:exon
so has part: feature:1092209-1092679:-1:exon
so has part: feature:1090752-1090872:-1:exon
so has part: feature:1089388-1089542:-1:exon
so has part: feature:1087862-1088035:-1:exon
so has part: feature:1072179-1072463:-1:exon
so has part: feature:1069874-1069927:-1:exon
so has part: feature:1067716-1067853:-1:exon
so has part: feature:1065703-1065807:-1:exon
so has part: feature:1062928-1063198:-1:exon
so has part: feature:1060603-1062148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1163727-1164070:-1:exon

position:1163727:-1
position: 1163727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1155676-1155765:-1:exon

position:1155676:-1
position: 1155676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155765:-1
position: 1155765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1151342-1151470:-1:exon

position:1151342:-1
position: 1151342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151470:-1
position: 1151470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1143994-1144085:-1:exon

position:1143994:-1
position: 1143994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144085:-1
position: 1144085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1133834-1134061:-1:exon

position:1133834:-1
position: 1133834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134061:-1
position: 1134061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1131200-1131263:-1:exon

position:1131200:-1
position: 1131200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131263:-1
position: 1131263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1125258-1125399:-1:exon

position:1125258:-1
position: 1125258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125399:-1
position: 1125399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1121280-1121486:-1:exon

position:1121280:-1
position: 1121280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1121486:-1
position: 1121486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1119630-1119911:-1:exon

position:1119630:-1
position: 1119630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119911:-1
position: 1119911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1115815-1116165:-1:exon

position:1115815:-1
position: 1115815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116165:-1
position: 1116165
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scn8a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: scn8a
product: sodium voltage-gated channel alpha subunit 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 111 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015658.1
SIO_010081: scn8a
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urn:…
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urn:…
SIO_000300: 25
SIO_000628: feature:1060603-1062148:-1:exon

scn8a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: scn8a
product: sodium voltage-gated channel alpha subunit 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033015659.1
SIO_010081: scn8a
subclass of: SO_0000673
so part of: scn8a
location: complement(join(1060603..1062148,1062928..1063198,1065703..1065807,1067716..1067853,1069874..1069927,1072179..1072463,1087862..1088035,1089388..1089542,1090752..1090872,1092209..1092679,1094214..1094570,1095845..1096018,1099785..1100023,1101008..1101140,1115782..1116165,1119630..1119911,1121280..1121486,1125258..1125399,1131200..1131263,1133834..1134061,1143994..1144085,1151342..1151470,1155676..1155765,1163727..1164070))
location: region:1060603-1164070:-1
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urn:…
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urn:…
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scn8a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: scn8a
product: sodium voltage-gated channel alpha subunit 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 107 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015657.1
SIO_010081: scn8a
subclass of: SO_0000673
so part of: scn8a
location: complement(join(1060603..1062148,1062928..1063198,1065703..1065807,1067716..1067853,1069874..1069927,1072179..1072463,1082183..1082305,1087862..1088035,1089388..1089542,1090752..1090872,1092209..1092679,1094214..1094570,1095845..1096018,1099785..1100023,1101008..1101140,1115782..1116165,1119630..1119911,1121280..1121486,1125258..1125399,1131200..1131263,1133834..1134061,1143994..1144085,1151342..1151470,1155676..1155765,1163727..1164070))
location: region:1060603-1164070:-1
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urn:…
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urn:…
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scn8a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: scn8a
product: sodium voltage-gated channel alpha subunit 8, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015663.1
SIO_010081: scn8a
subclass of: SO_0000673
so part of: scn8a
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urn:…
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position:1144190:-1
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reference: sequence
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position:1144281:-1
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urn:…
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SIO_000628: feature:1099785-1100023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1095845-1096018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1094214-1094570:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092209-1092679:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1090752-1090872:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1089388-1089542:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1087862-1088035:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072179-1072463:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1069874-1069927:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1067716-1067853:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1065703-1065807:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1062928-1063198:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1060603-1062148:-1:exon

scn8a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: scn8a
product: sodium voltage-gated channel alpha subunit 8, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 76 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015661.1
SIO_010081: scn8a
subclass of: SO_0000673
so part of: scn8a
location: complement(join(1060603..1062148,1062928..1063198,1065703..1065807,1067716..1067853,1069874..1069927,1072179..1072463,1082183..1082305,1087862..1088035,1089388..1089542,1090752..1090872,1092209..1092679,1094214..1094570,1095845..1096018,1099785..1100023,1101008..1101140,1115815..1116165,1119630..1119911,1121280..1121486,1125258..1125399,1131200..1131263,1133834..1134061,1144190..1144281,1151342..1151470,1155676..1155765,1163727..1164070))
location: region:1060603-1164070:-1
so has part: feature:1163727-1164070:-1:exon
so has part: feature:1155676-1155765:-1:exon
so has part: feature:1151342-1151470:-1:exon
so has part: feature:1144190-1144281:-1:exon
so has part: feature:1133834-1134061:-1:exon
so has part: feature:1131200-1131263:-1:exon
so has part: feature:1125258-1125399:-1:exon
so has part: feature:1121280-1121486:-1:exon
so has part: feature:1119630-1119911:-1:exon
so has part: feature:1115815-1116165:-1:exon
so has part: feature:1101008-1101140:-1:exon
so has part: feature:1099785-1100023:-1:exon
so has part: feature:1095845-1096018:-1:exon
so has part: feature:1094214-1094570:-1:exon
so has part: feature:1092209-1092679:-1:exon
so has part: feature:1090752-1090872:-1:exon
so has part: feature:1089388-1089542:-1:exon
so has part: feature:1087862-1088035:-1:exon
so has part: feature:1082183-1082305:-1:exon
so has part: feature:1072179-1072463:-1:exon
so has part: feature:1069874-1069927:-1:exon
so has part: feature:1067716-1067853:-1:exon
so has part: feature:1065703-1065807:-1:exon
so has part: feature:1062928-1063198:-1:exon
so has part: feature:1060603-1062148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1163727-1164070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155676-1155765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151342-1151470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144190-1144281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1133834-1134061:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131200-1131263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1125258-1125399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1121280-1121486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1119630-1119911:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115815-1116165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101008-1101140:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1099785-1100023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1095845-1096018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1094214-1094570:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092209-1092679:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1090752-1090872:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1089388-1089542:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1087862-1088035:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1082183-1082305:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1072179-1072463:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1069874-1069927:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1067716-1067853:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1065703-1065807:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1062928-1063198:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1060603-1062148:-1:exon

scn8a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: scn8a
product: sodium voltage-gated channel alpha subunit 8, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015662.1
SIO_010081: scn8a
subclass of: SO_0000673
so part of: scn8a
location: complement(join(1060603..1062148,1062928..1063198,1065703..1065807,1067716..1067853,1069874..1069927,1072179..1072463,1082183..1082305,1087862..1088035,1089388..1089542,1090752..1090872,1092209..1092679,1094214..1094570,1095845..1096018,1099785..1100023,1101008..1101140,1115782..1116165,1119630..1119911,1121280..1121486,1125258..1125399,1131200..1131263,1133834..1134061,1144190..1144281,1151342..1151470,1155676..1155765,1163727..1164070))
location: region:1060603-1164070:-1
so has part: feature:1163727-1164070:-1:exon
so has part: feature:1155676-1155765:-1:exon
so has part: feature:1151342-1151470:-1:exon
so has part: feature:1144190-1144281:-1:exon
so has part: feature:1133834-1134061:-1:exon
so has part: feature:1131200-1131263:-1:exon
so has part: feature:1125258-1125399:-1:exon
so has part: feature:1121280-1121486:-1:exon
so has part: feature:1119630-1119911:-1:exon
so has part: feature:1115782-1116165:-1:exon
so has part: feature:1101008-1101140:-1:exon
so has part: feature:1099785-1100023:-1:exon
so has part: feature:1095845-1096018:-1:exon
so has part: feature:1094214-1094570:-1:exon
so has part: feature:1092209-1092679:-1:exon
so has part: feature:1090752-1090872:-1:exon
so has part: feature:1089388-1089542:-1:exon
so has part: feature:1087862-1088035:-1:exon
so has part: feature:1082183-1082305:-1:exon
so has part: feature:1072179-1072463:-1:exon
so has part: feature:1069874-1069927:-1:exon
so has part: feature:1067716-1067853:-1:exon
so has part: feature:1065703-1065807:-1:exon
so has part: feature:1062928-1063198:-1:exon
so has part: feature:1060603-1062148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1163727-1164070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155676-1155765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151342-1151470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144190-1144281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1133834-1134061:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131200-1131263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1125258-1125399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1121280-1121486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1119630-1119911:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115782-1116165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101008-1101140:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1099785-1100023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1095845-1096018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1094214-1094570:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092209-1092679:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1090752-1090872:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1089388-1089542:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1087862-1088035:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1082183-1082305:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1072179-1072463:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1069874-1069927:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1067716-1067853:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1065703-1065807:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1062928-1063198:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1060603-1062148:-1:exon

scn8a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: scn8a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X4
translation: MFPLLSSQTFIVLNRGKTIFRFSAAPAMYILGPLNPLRRFAIKILIHSLFSMIIMATILTNCVFMTFSKPPDWSKQVEYTFTGIYTFESLVKMIARGFCIDSFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPPNPAYLNATDENGTRLFDFGEYIMNKTNFYTVAGIPDALLCGNGTDAGQCPEGYICMKAGRNPNYGYTSFDTFGWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAERKEQEFKQMLEQLKRQQEDALMAAAAATSAGTVSEDALDEEEEGQMSQSSSELSKLSSKSAKERRNRRRKRKQTRGHSEGEEKGDHEKILKSESENGISKRARHLAHGMKYPMNQSQLSILGSPNLTRFDSKSSIFSIRDRKEPSSETEFADDEHSTVEETDGNRKNSLFVPNKEPYRRNSYSGYSQPSKSSKMFPVLPVNVKRNSTVDCNGVVSLIGGPGANLPGGRLLPEPITEIESKKKLSGSLLVSMDQLNASFGRKDRANSVLSVLTNTLEELEESQRKCPPCWYKFSNMFLIWECSPNWLKLKHHLHLFVFDPFVDLTITICIGLNTLFMAMEHYPMTEQFEHVLFVGNLVFTAIFTAEMVMKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKINKDCILPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLVVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEINNLQLSVIRIKKGIAFMKIYSHEFVQKHFKSKDADEAKPLDELIDKKVNYIGNHMGADINREMDYQKNGNGTTSGIGSSVEKYIIDDDHNSFIHNPNLTVRVPIAVGESDFENLNTEDFSSESEVGGSKEKLDDTSSSEGSTIDIKPEGDEGPPVEQPEEYLDPMACFTDGCVARFNCCQVSIEEGWGRPWWTLRKTCFLIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIRIILEYADKIFTYIFIIEMLLKWVAYGFQKYFTNAWCWLDFLIVDVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETSEYRFLPTEVNNKTECENRMSTNNDEVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKVEEQPFYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPSKPIPRPLNIIQGGVYDFVTQQVFDILIMILICLNMVTMMVETDDQSKDSELILYWINFIFIIFFTSECVLKLFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKKEDGIDDMFNFETFGNSMICLFQVTTSAGWDGLLLPILNRPPDCDINKENPGTSVKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESAEPLSEDDFETFYEIWEKFDPDATQFIEYNKLSDFADTLEAPLRVPKPNHIELIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDVLRQQMEERFVASNPSKVSYEPITTTLRRKHEEVCAIIIQRAYRAHLARRKISTKGRLLYSKPGGHANENGNTNQEKKEGTPSTASLPSYDSVTKPEKQEKDRKGNDKGRSNQKDIRESKL
SIO_010081: scn8a
subclass of: SO_0000673
so part of: scn8a
location: complement(join(1060989..1062148,1062928..1063198,1065703..1065807,1067716..1067853,1069874..1069927,1072179..1072463,1087862..1088035,1089388..1089542,1090752..1090872,1092209..1092679,1094214..1094570,1095845..1096018,1099785..1100023,1101008..1101140,1115815..1116165,1119630..1119911,1121280..1121486,1125258..1125399,1131200..1131263,1133834..1134061,1143994..1144085,1151342..1151470,1155676..1155765,1163727..1163869))
location: region:1060989-1163869:-1
so has part: feature:1163727-1163869:-1:exon
so has part: feature:1155676-1155765:-1:exon
so has part: feature:1151342-1151470:-1:exon
so has part: feature:1143994-1144085:-1:exon
so has part: feature:1133834-1134061:-1:exon
so has part: feature:1131200-1131263:-1:exon
so has part: feature:1125258-1125399:-1:exon
so has part: feature:1121280-1121486:-1:exon
so has part: feature:1119630-1119911:-1:exon
so has part: feature:1115815-1116165:-1:exon
so has part: feature:1101008-1101140:-1:exon
so has part: feature:1099785-1100023:-1:exon
so has part: feature:1095845-1096018:-1:exon
so has part: feature:1094214-1094570:-1:exon
so has part: feature:1092209-1092679:-1:exon
so has part: feature:1090752-1090872:-1:exon
so has part: feature:1089388-1089542:-1:exon
so has part: feature:1087862-1088035:-1:exon
so has part: feature:1072179-1072463:-1:exon
so has part: feature:1069874-1069927:-1:exon
so has part: feature:1067716-1067853:-1:exon
so has part: feature:1065703-1065807:-1:exon
so has part: feature:1062928-1063198:-1:exon
so has part: feature:1060989-1062148:-1:exon

XP_032871551.1
type: Protein
SIO_000068: ncbiprotein

position:1060989:-1
position: 1060989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163869:-1
position: 1163869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1163727-1163869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155676-1155765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151342-1151470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143994-1144085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1133834-1134061:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131200-1131263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1125258-1125399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1121280-1121486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1119630-1119911:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115815-1116165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101008-1101140:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1099785-1100023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1095845-1096018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1094214-1094570:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092209-1092679:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1090752-1090872:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1089388-1089542:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1087862-1088035:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072179-1072463:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1069874-1069927:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1067716-1067853:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1065703-1065807:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1062928-1063198:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1060989-1062148:-1:exon

scn8a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: scn8a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X2
translation: MFPLLSSQTFIVLNRGKTIFRFSAAPAMYILGPLNPLRRFAIKILIHSLFSMIIMATILTNCVFMTFSKPPDWSKQVEYTFTGIYTFESLVKMIARGFCIDSFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPPNPAYLNATDENGTRLFDFGEYIMNKTNFYTVAGIPDALLCGNGTDAGQCPEGYICMKAGRNPNYGYTSFDTFGWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAERKEQEFKQMLEQLKRQQEDALMAAAAATSAGTVSEDALDEEEEGQMSQSSSELSKLSSKSAKERRNRRRKRKQTRGHSEGEEKGDHEKILKSESENGISKRARHLAHGMKYPMNQSQLSILGSPNLTRFDSKSSIFSIRDRKEPSSETEFADDEHSTVEETDGNRKNSLFVPNKEPYRRNSYSGYSQPSKSSKMFPVLPVNVKRNSTVDCNGVVSLIGGPGANLPGGRLLPEPITEIESKKKLSGSLLVSMDQLNASFGRKDRANSVLSVLTNTLEELEESQRKCPPCWYKFSNMFLIWECSPNWLKLKHHLHLFVFDPFVDLTITICIGLNTLFMAMEHYPMTEQFEHVLFVGNLVFTAIFTAEMVMKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKINKDCILPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLVVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEINNLQLSVIRIKKGIAFMKIYSHEFVQKHFKSKDADEAKPLDELIDKKVNYIGNHMGADINREMDYQKNGNGTTSGIGSSVEKYIIDDDHNSFIHNPNLTVRVPIAVGESDFENLNTEDFSSESEVGGSKEKLDDTSSSEGSTIDIKPEGDEGPPVEQPEEYLDPMACFTDGCVARFNCCQVSIEEGWGRPWWTLRKTCFLIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIRIILEYADKIFTYIFIIEMLLKWVAYGFQKYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETSEYRFLPTEVNNKTECENRMSTNNDEVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKVEEQPFYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPSKPIPRPLNIIQGGVYDFVTQQVFDILIMILICLNMVTMMVETDDQSKDSELILYWINFIFIIFFTSECVLKLFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKKEDGIDDMFNFETFGNSMICLFQVTTSAGWDGLLLPILNRPPDCDINKENPGTSVKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESAEPLSEDDFETFYEIWEKFDPDATQFIEYNKLSDFADTLEAPLRVPKPNHIELIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDVLRQQMEERFVASNPSKVSYEPITTTLRRKHEEVCAIIIQRAYRAHLARRKISTKGRLLYSKPGGHANENGNTNQEKKEGTPSTASLPSYDSVTKPEKQEKDRKGNDKGRSNQKDIRESKL
SIO_010081: scn8a
subclass of: SO_0000673
so part of: scn8a
location: complement(join(1060989..1062148,1062928..1063198,1065703..1065807,1067716..1067853,1069874..1069927,1072179..1072463,1082183..1082305,1087862..1088035,1089388..1089542,1090752..1090872,1092209..1092679,1094214..1094570,1095845..1096018,1099785..1100023,1101008..1101140,1115815..1116165,1119630..1119911,1121280..1121486,1125258..1125399,1131200..1131263,1133834..1134061,1143994..1144085,1151342..1151470,1155676..1155765,1163727..1163869))
location: region:1060989-1163869:-1
so has part: feature:1163727-1163869:-1:exon
so has part: feature:1155676-1155765:-1:exon
so has part: feature:1151342-1151470:-1:exon
so has part: feature:1143994-1144085:-1:exon
so has part: feature:1133834-1134061:-1:exon
so has part: feature:1131200-1131263:-1:exon
so has part: feature:1125258-1125399:-1:exon
so has part: feature:1121280-1121486:-1:exon
so has part: feature:1119630-1119911:-1:exon
so has part: feature:1115815-1116165:-1:exon
so has part: feature:1101008-1101140:-1:exon
so has part: feature:1099785-1100023:-1:exon
so has part: feature:1095845-1096018:-1:exon
so has part: feature:1094214-1094570:-1:exon
so has part: feature:1092209-1092679:-1:exon
so has part: feature:1090752-1090872:-1:exon
so has part: feature:1089388-1089542:-1:exon
so has part: feature:1087862-1088035:-1:exon
so has part: feature:1082183-1082305:-1:exon
so has part: feature:1072179-1072463:-1:exon
so has part: feature:1069874-1069927:-1:exon
so has part: feature:1067716-1067853:-1:exon
so has part: feature:1065703-1065807:-1:exon
so has part: feature:1062928-1063198:-1:exon
so has part: feature:1060989-1062148:-1:exon

XP_032871549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1163727-1163869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155676-1155765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151342-1151470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143994-1144085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1133834-1134061:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131200-1131263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1125258-1125399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1121280-1121486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1119630-1119911:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115815-1116165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101008-1101140:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1099785-1100023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1095845-1096018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1094214-1094570:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092209-1092679:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1090752-1090872:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1089388-1089542:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1087862-1088035:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1082183-1082305:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1072179-1072463:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1069874-1069927:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1067716-1067853:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1065703-1065807:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1062928-1063198:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1060989-1062148:-1:exon

scn8a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: scn8a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X3
translation: MFPLLSSQTFIVLNRGKTIFRFSAAPAMYILGPLNPLRRFAIKILIHSLFSMIIMATILTNCVFMTFSKPPDWSKQVEYTFTGIYTFESLVKMIARGFCIDSFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPPNPAYLNATDENGTRLFDFGEYIMNKTNFYTVAGIPDALLCGNGTDAGQCPEGYICMKAGRNPNYGYTSFDTFGWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAERKEQEFKQMLEQLKRQQEDALMAAAAATSAGTVSEDALDEEEEGQMSQSSSELSKLSSKSAKERRNRRRKRKQTRGHSEGEEKGDHEKILKSESENGISKRARHLAHGMKYPMNQSQLSILGSPNLTRFDSKSSIFSIRDRKEPSSETEFADDEHSTVEETDGNRKNSLFVPNKEPYRRNSYSGYSQPSKSSKMFPVLPVNVKRNSTVDCNGVVSLIGGPGANLPGGRLLPEVIIDKAATDDSPITEIESKKKLSGSLLVSMDQLNASFGRKDRANSVLSVLTNTLEELEESQRKCPPCWYKFSNMFLIWECSPNWLKLKHHLHLFVFDPFVDLTITICIGLNTLFMAMEHYPMTEQFEHVLFVGNLVFTAIFTAEMVMKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKINKDCILPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLVVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEINNLQLSVIRIKKGIAFMKIYSHEFVQKHFKSKDADEAKPLDELIDKKVNYIGNHMGADINREMDYQKNGNGTTSGIGSSVEKYIIDDDHNSFIHNPNLTVRVPIAVGESDFENLNTEDFSSESEVGGSKEKLDDTSSSEGSTIDIKPEGDEGPPVEQPEEYLDPMACFTDGCVARFNCCQVSIEEGWGRPWWTLRKTCFLIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIRIILEYADKIFTYIFIIEMLLKWVAYGFQKYFTNAWCWLDFLIVDVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETSEYRFLPTEVNNKTECENRMSTNNDEVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKVEEQPFYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPSKPIPRPLNIIQGGVYDFVTQQVFDILIMILICLNMVTMMVETDDQSKDSELILYWINFIFIIFFTSECVLKLFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKKEDGIDDMFNFETFGNSMICLFQVTTSAGWDGLLLPILNRPPDCDINKENPGTSVKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESAEPLSEDDFETFYEIWEKFDPDATQFIEYNKLSDFADTLEAPLRVPKPNHIELIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDVLRQQMEERFVASNPSKVSYEPITTTLRRKHEEVCAIIIQRAYRAHLARRKISTKGRLLYSKPGGHANENGNTNQEKKEGTPSTASLPSYDSVTKPEKQEKDRKGNDKGRSNQKDIRESKL
SIO_010081: scn8a
subclass of: SO_0000673
so part of: scn8a
location: complement(join(1060989..1062148,1062928..1063198,1065703..1065807,1067716..1067853,1069874..1069927,1072179..1072463,1087862..1088035,1089388..1089542,1090752..1090872,1092209..1092679,1094214..1094570,1095845..1096018,1099785..1100023,1101008..1101140,1115782..1116165,1119630..1119911,1121280..1121486,1125258..1125399,1131200..1131263,1133834..1134061,1143994..1144085,1151342..1151470,1155676..1155765,1163727..1163869))
location: region:1060989-1163869:-1
so has part: feature:1163727-1163869:-1:exon
so has part: feature:1155676-1155765:-1:exon
so has part: feature:1151342-1151470:-1:exon
so has part: feature:1143994-1144085:-1:exon
so has part: feature:1133834-1134061:-1:exon
so has part: feature:1131200-1131263:-1:exon
so has part: feature:1125258-1125399:-1:exon
so has part: feature:1121280-1121486:-1:exon
so has part: feature:1119630-1119911:-1:exon
so has part: feature:1115782-1116165:-1:exon
so has part: feature:1101008-1101140:-1:exon
so has part: feature:1099785-1100023:-1:exon
so has part: feature:1095845-1096018:-1:exon
so has part: feature:1094214-1094570:-1:exon
so has part: feature:1092209-1092679:-1:exon
so has part: feature:1090752-1090872:-1:exon
so has part: feature:1089388-1089542:-1:exon
so has part: feature:1087862-1088035:-1:exon
so has part: feature:1072179-1072463:-1:exon
so has part: feature:1069874-1069927:-1:exon
so has part: feature:1067716-1067853:-1:exon
so has part: feature:1065703-1065807:-1:exon
so has part: feature:1062928-1063198:-1:exon
so has part: feature:1060989-1062148:-1:exon

XP_032871550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1163727-1163869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155676-1155765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151342-1151470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143994-1144085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1133834-1134061:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131200-1131263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1125258-1125399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1121280-1121486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1119630-1119911:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115782-1116165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101008-1101140:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1099785-1100023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1095845-1096018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1094214-1094570:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092209-1092679:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1090752-1090872:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1089388-1089542:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1087862-1088035:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072179-1072463:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1069874-1069927:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1067716-1067853:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1065703-1065807:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1062928-1063198:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1060989-1062148:-1:exon

scn8a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: scn8a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X1
translation: MFPLLSSQTFIVLNRGKTIFRFSAAPAMYILGPLNPLRRFAIKILIHSLFSMIIMATILTNCVFMTFSKPPDWSKQVEYTFTGIYTFESLVKMIARGFCIDSFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPPNPAYLNATDENGTRLFDFGEYIMNKTNFYTVAGIPDALLCGNGTDAGQCPEGYICMKAGRNPNYGYTSFDTFGWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAERKEQEFKQMLEQLKRQQEDALMAAAAATSAGTVSEDALDEEEEGQMSQSSSELSKLSSKSAKERRNRRRKRKQTRGHSEGEEKGDHEKILKSESENGISKRARHLAHGMKYPMNQSQLSILGSPNLTRFDSKSSIFSIRDRKEPSSETEFADDEHSTVEETDGNRKNSLFVPNKEPYRRNSYSGYSQPSKSSKMFPVLPVNVKRNSTVDCNGVVSLIGGPGANLPGGRLLPEVIIDKAATDDSPITEIESKKKLSGSLLVSMDQLNASFGRKDRANSVLSVLTNTLEELEESQRKCPPCWYKFSNMFLIWECSPNWLKLKHHLHLFVFDPFVDLTITICIGLNTLFMAMEHYPMTEQFEHVLFVGNLVFTAIFTAEMVMKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKINKDCILPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLVVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEINNLQLSVIRIKKGIAFMKIYSHEFVQKHFKSKDADEAKPLDELIDKKVNYIGNHMGADINREMDYQKNGNGTTSGIGSSVEKYIIDDDHNSFIHNPNLTVRVPIAVGESDFENLNTEDFSSESEVGGSKEKLDDTSSSEGSTIDIKPEGDEGPPVEQPEEYLDPMACFTDGCVARFNCCQVSIEEGWGRPWWTLRKTCFLIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIRIILEYADKIFTYIFIIEMLLKWVAYGFQKYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETSEYRFLPTEVNNKTECENRMSTNNDEVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKVEEQPFYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPSKPIPRPLNIIQGGVYDFVTQQVFDILIMILICLNMVTMMVETDDQSKDSELILYWINFIFIIFFTSECVLKLFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKKEDGIDDMFNFETFGNSMICLFQVTTSAGWDGLLLPILNRPPDCDINKENPGTSVKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESAEPLSEDDFETFYEIWEKFDPDATQFIEYNKLSDFADTLEAPLRVPKPNHIELIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDVLRQQMEERFVASNPSKVSYEPITTTLRRKHEEVCAIIIQRAYRAHLARRKISTKGRLLYSKPGGHANENGNTNQEKKEGTPSTASLPSYDSVTKPEKQEKDRKGNDKGRSNQKDIRESKL
SIO_010081: scn8a
subclass of: SO_0000673
so part of: scn8a
location: complement(join(1060989..1062148,1062928..1063198,1065703..1065807,1067716..1067853,1069874..1069927,1072179..1072463,1082183..1082305,1087862..1088035,1089388..1089542,1090752..1090872,1092209..1092679,1094214..1094570,1095845..1096018,1099785..1100023,1101008..1101140,1115782..1116165,1119630..1119911,1121280..1121486,1125258..1125399,1131200..1131263,1133834..1134061,1143994..1144085,1151342..1151470,1155676..1155765,1163727..1163869))
location: region:1060989-1163869:-1
so has part: feature:1163727-1163869:-1:exon
so has part: feature:1155676-1155765:-1:exon
so has part: feature:1151342-1151470:-1:exon
so has part: feature:1143994-1144085:-1:exon
so has part: feature:1133834-1134061:-1:exon
so has part: feature:1131200-1131263:-1:exon
so has part: feature:1125258-1125399:-1:exon
so has part: feature:1121280-1121486:-1:exon
so has part: feature:1119630-1119911:-1:exon
so has part: feature:1115782-1116165:-1:exon
so has part: feature:1101008-1101140:-1:exon
so has part: feature:1099785-1100023:-1:exon
so has part: feature:1095845-1096018:-1:exon
so has part: feature:1094214-1094570:-1:exon
so has part: feature:1092209-1092679:-1:exon
so has part: feature:1090752-1090872:-1:exon
so has part: feature:1089388-1089542:-1:exon
so has part: feature:1087862-1088035:-1:exon
so has part: feature:1082183-1082305:-1:exon
so has part: feature:1072179-1072463:-1:exon
so has part: feature:1069874-1069927:-1:exon
so has part: feature:1067716-1067853:-1:exon
so has part: feature:1065703-1065807:-1:exon
so has part: feature:1062928-1063198:-1:exon
so has part: feature:1060989-1062148:-1:exon

XP_032871548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1163727-1163869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155676-1155765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151342-1151470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143994-1144085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1133834-1134061:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131200-1131263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1125258-1125399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1121280-1121486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1119630-1119911:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115782-1116165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101008-1101140:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1099785-1100023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1095845-1096018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1094214-1094570:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092209-1092679:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1090752-1090872:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1089388-1089542:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1087862-1088035:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1082183-1082305:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1072179-1072463:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1069874-1069927:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1067716-1067853:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1065703-1065807:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1062928-1063198:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1060989-1062148:-1:exon

scn8a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: scn8a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X7
translation: MFPLLSSQTFIVLNRGKTIFRFSAAPAMYILGPLNPLRRFAIKILIHSLFSMIIMATILTNCVFMTFSKPPDWSKQVEYTFTGIYTFESLVKMIARGFCIDSFTFLRDPWNWLDFSVIMMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPPNPAYLNATDENGTRLFDFGEYIMNKTNFYTVAGIPDALLCGNGTDAGQCPEGYICMKAGRNPNYGYTSFDTFGWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAERKEQEFKQMLEQLKRQQEDALMAAAAATSAGTVSEDALDEEEEGQMSQSSSELSKLSSKSAKERRNRRRKRKQTRGHSEGEEKGDHEKILKSESENGISKRARHLAHGMKYPMNQSQLSILGSPNLTRFDSKSSIFSIRDRKEPSSETEFADDEHSTVEETDGNRKNSLFVPNKEPYRRNSYSGYSQPSKSSKMFPVLPVNVKRNSTVDCNGVVSLIGGPGANLPGGRLLPEPITEIESKKKLSGSLLVSMDQLNASFGRKDRANSVLSVLTNTLEELEESQRKCPPCWYKFSNMFLIWECSPNWLKLKHHLHLFVFDPFVDLTITICIGLNTLFMAMEHYPMTEQFEHVLFVGNLVFTAIFTAEMVMKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKINKDCILPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLVVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEINNLQLSVIRIKKGIAFMKIYSHEFVQKHFKSKDADEAKPLDELIDKKVNYIGNHMGADINREMDYQKNGNGTTSGIGSSVEKYIIDDDHNSFIHNPNLTVRVPIAVGESDFENLNTEDFSSESEVGGSKEKLDDTSSSEGSTIDIKPEGDEGPPVEQPEEYLDPMACFTDGCVARFNCCQVSIEEGWGRPWWTLRKTCFLIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIRIILEYADKIFTYIFIIEMLLKWVAYGFQKYFTNAWCWLDFLIVDVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETSEYRFLPTEVNNKTECENRMSTNNDEVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKVEEQPFYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPSKPIPRPLNIIQGGVYDFVTQQVFDILIMILICLNMVTMMVETDDQSKDSELILYWINFIFIIFFTSECVLKLFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKKEDGIDDMFNFETFGNSMICLFQVTTSAGWDGLLLPILNRPPDCDINKENPGTSVKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESAEPLSEDDFETFYEIWEKFDPDATQFIEYNKLSDFADTLEAPLRVPKPNHIELIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDVLRQQMEERFVASNPSKVSYEPITTTLRRKHEEVCAIIIQRAYRAHLARRKISTKGRLLYSKPGGHANENGNTNQEKKEGTPSTASLPSYDSVTKPEKQEKDRKGNDKGRSNQKDIRESKL
SIO_010081: scn8a
subclass of: SO_0000673
so part of: scn8a
location: complement(join(1060989..1062148,1062928..1063198,1065703..1065807,1067716..1067853,1069874..1069927,1072179..1072463,1087862..1088035,1089388..1089542,1090752..1090872,1092209..1092679,1094214..1094570,1095845..1096018,1099785..1100023,1101008..1101140,1115815..1116165,1119630..1119911,1121280..1121486,1125258..1125399,1131200..1131263,1133834..1134061,1144190..1144281,1151342..1151470,1155676..1155765,1163727..1163869))
location: region:1060989-1163869:-1
so has part: feature:1163727-1163869:-1:exon
so has part: feature:1155676-1155765:-1:exon
so has part: feature:1151342-1151470:-1:exon
so has part: feature:1144190-1144281:-1:exon
so has part: feature:1133834-1134061:-1:exon
so has part: feature:1131200-1131263:-1:exon
so has part: feature:1125258-1125399:-1:exon
so has part: feature:1121280-1121486:-1:exon
so has part: feature:1119630-1119911:-1:exon
so has part: feature:1115815-1116165:-1:exon
so has part: feature:1101008-1101140:-1:exon
so has part: feature:1099785-1100023:-1:exon
so has part: feature:1095845-1096018:-1:exon
so has part: feature:1094214-1094570:-1:exon
so has part: feature:1092209-1092679:-1:exon
so has part: feature:1090752-1090872:-1:exon
so has part: feature:1089388-1089542:-1:exon
so has part: feature:1087862-1088035:-1:exon
so has part: feature:1072179-1072463:-1:exon
so has part: feature:1069874-1069927:-1:exon
so has part: feature:1067716-1067853:-1:exon
so has part: feature:1065703-1065807:-1:exon
so has part: feature:1062928-1063198:-1:exon
so has part: feature:1060989-1062148:-1:exon

XP_032871554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1163727-1163869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155676-1155765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151342-1151470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144190-1144281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1133834-1134061:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131200-1131263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1125258-1125399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1121280-1121486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1119630-1119911:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115815-1116165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101008-1101140:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1099785-1100023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1095845-1096018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1094214-1094570:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092209-1092679:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1090752-1090872:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1089388-1089542:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1087862-1088035:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1072179-1072463:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1069874-1069927:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1067716-1067853:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1065703-1065807:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1062928-1063198:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1060989-1062148:-1:exon

scn8a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: scn8a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X5
translation: MFPLLSSQTFIVLNRGKTIFRFSAAPAMYILGPLNPLRRFAIKILIHSLFSMIIMATILTNCVFMTFSKPPDWSKQVEYTFTGIYTFESLVKMIARGFCIDSFTFLRDPWNWLDFSVIMMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPPNPAYLNATDENGTRLFDFGEYIMNKTNFYTVAGIPDALLCGNGTDAGQCPEGYICMKAGRNPNYGYTSFDTFGWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAERKEQEFKQMLEQLKRQQEDALMAAAAATSAGTVSEDALDEEEEGQMSQSSSELSKLSSKSAKERRNRRRKRKQTRGHSEGEEKGDHEKILKSESENGISKRARHLAHGMKYPMNQSQLSILGSPNLTRFDSKSSIFSIRDRKEPSSETEFADDEHSTVEETDGNRKNSLFVPNKEPYRRNSYSGYSQPSKSSKMFPVLPVNVKRNSTVDCNGVVSLIGGPGANLPGGRLLPEPITEIESKKKLSGSLLVSMDQLNASFGRKDRANSVLSVLTNTLEELEESQRKCPPCWYKFSNMFLIWECSPNWLKLKHHLHLFVFDPFVDLTITICIGLNTLFMAMEHYPMTEQFEHVLFVGNLVFTAIFTAEMVMKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKINKDCILPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLVVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEINNLQLSVIRIKKGIAFMKIYSHEFVQKHFKSKDADEAKPLDELIDKKVNYIGNHMGADINREMDYQKNGNGTTSGIGSSVEKYIIDDDHNSFIHNPNLTVRVPIAVGESDFENLNTEDFSSESEVGGSKEKLDDTSSSEGSTIDIKPEGDEGPPVEQPEEYLDPMACFTDGCVARFNCCQVSIEEGWGRPWWTLRKTCFLIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIRIILEYADKIFTYIFIIEMLLKWVAYGFQKYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETSEYRFLPTEVNNKTECENRMSTNNDEVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKVEEQPFYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPSKPIPRPLNIIQGGVYDFVTQQVFDILIMILICLNMVTMMVETDDQSKDSELILYWINFIFIIFFTSECVLKLFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKKEDGIDDMFNFETFGNSMICLFQVTTSAGWDGLLLPILNRPPDCDINKENPGTSVKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESAEPLSEDDFETFYEIWEKFDPDATQFIEYNKLSDFADTLEAPLRVPKPNHIELIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDVLRQQMEERFVASNPSKVSYEPITTTLRRKHEEVCAIIIQRAYRAHLARRKISTKGRLLYSKPGGHANENGNTNQEKKEGTPSTASLPSYDSVTKPEKQEKDRKGNDKGRSNQKDIRESKL
SIO_010081: scn8a
subclass of: SO_0000673
so part of: scn8a
location: complement(join(1060989..1062148,1062928..1063198,1065703..1065807,1067716..1067853,1069874..1069927,1072179..1072463,1082183..1082305,1087862..1088035,1089388..1089542,1090752..1090872,1092209..1092679,1094214..1094570,1095845..1096018,1099785..1100023,1101008..1101140,1115815..1116165,1119630..1119911,1121280..1121486,1125258..1125399,1131200..1131263,1133834..1134061,1144190..1144281,1151342..1151470,1155676..1155765,1163727..1163869))
location: region:1060989-1163869:-1
so has part: feature:1163727-1163869:-1:exon
so has part: feature:1155676-1155765:-1:exon
so has part: feature:1151342-1151470:-1:exon
so has part: feature:1144190-1144281:-1:exon
so has part: feature:1133834-1134061:-1:exon
so has part: feature:1131200-1131263:-1:exon
so has part: feature:1125258-1125399:-1:exon
so has part: feature:1121280-1121486:-1:exon
so has part: feature:1119630-1119911:-1:exon
so has part: feature:1115815-1116165:-1:exon
so has part: feature:1101008-1101140:-1:exon
so has part: feature:1099785-1100023:-1:exon
so has part: feature:1095845-1096018:-1:exon
so has part: feature:1094214-1094570:-1:exon
so has part: feature:1092209-1092679:-1:exon
so has part: feature:1090752-1090872:-1:exon
so has part: feature:1089388-1089542:-1:exon
so has part: feature:1087862-1088035:-1:exon
so has part: feature:1082183-1082305:-1:exon
so has part: feature:1072179-1072463:-1:exon
so has part: feature:1069874-1069927:-1:exon
so has part: feature:1067716-1067853:-1:exon
so has part: feature:1065703-1065807:-1:exon
so has part: feature:1062928-1063198:-1:exon
so has part: feature:1060989-1062148:-1:exon

XP_032871552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1163727-1163869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155676-1155765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151342-1151470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144190-1144281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1133834-1134061:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131200-1131263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1125258-1125399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1121280-1121486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1119630-1119911:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115815-1116165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101008-1101140:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1099785-1100023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1095845-1096018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1094214-1094570:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092209-1092679:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1090752-1090872:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1089388-1089542:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1087862-1088035:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1082183-1082305:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1072179-1072463:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1069874-1069927:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1067716-1067853:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1065703-1065807:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1062928-1063198:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1060989-1062148:-1:exon

scn8a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: scn8a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha isoform X6
translation: MFPLLSSQTFIVLNRGKTIFRFSAAPAMYILGPLNPLRRFAIKILIHSLFSMIIMATILTNCVFMTFSKPPDWSKQVEYTFTGIYTFESLVKMIARGFCIDSFTFLRDPWNWLDFSVIMMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPPNPAYLNATDENGTRLFDFGEYIMNKTNFYTVAGIPDALLCGNGTDAGQCPEGYICMKAGRNPNYGYTSFDTFGWAFLALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAERKEQEFKQMLEQLKRQQEDALMAAAAATSAGTVSEDALDEEEEGQMSQSSSELSKLSSKSAKERRNRRRKRKQTRGHSEGEEKGDHEKILKSESENGISKRARHLAHGMKYPMNQSQLSILGSPNLTRFDSKSSIFSIRDRKEPSSETEFADDEHSTVEETDGNRKNSLFVPNKEPYRRNSYSGYSQPSKSSKMFPVLPVNVKRNSTVDCNGVVSLIGGPGANLPGGRLLPEVIIDKAATDDSPITEIESKKKLSGSLLVSMDQLNASFGRKDRANSVLSVLTNTLEELEESQRKCPPCWYKFSNMFLIWECSPNWLKLKHHLHLFVFDPFVDLTITICIGLNTLFMAMEHYPMTEQFEHVLFVGNLVFTAIFTAEMVMKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKINKDCILPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLVVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEINNLQLSVIRIKKGIAFMKIYSHEFVQKHFKSKDADEAKPLDELIDKKVNYIGNHMGADINREMDYQKNGNGTTSGIGSSVEKYIIDDDHNSFIHNPNLTVRVPIAVGESDFENLNTEDFSSESEVGGSKEKLDDTSSSEGSTIDIKPEGDEGPPVEQPEEYLDPMACFTDGCVARFNCCQVSIEEGWGRPWWTLRKTCFLIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIRIILEYADKIFTYIFIIEMLLKWVAYGFQKYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETSEYRFLPTEVNNKTECENRMSTNNDEVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKVEEQPFYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPSKPIPRPLNIIQGGVYDFVTQQVFDILIMILICLNMVTMMVETDDQSKDSELILYWINFIFIIFFTSECVLKLFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKKEDGIDDMFNFETFGNSMICLFQVTTSAGWDGLLLPILNRPPDCDINKENPGTSVKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESAEPLSEDDFETFYEIWEKFDPDATQFIEYNKLSDFADTLEAPLRVPKPNHIELIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDVLRQQMEERFVASNPSKVSYEPITTTLRRKHEEVCAIIIQRAYRAHLARRKISTKGRLLYSKPGGHANENGNTNQEKKEGTPSTASLPSYDSVTKPEKQEKDRKGNDKGRSNQKDIRESKL
SIO_010081: scn8a
subclass of: SO_0000673
so part of: scn8a
location: complement(join(1060989..1062148,1062928..1063198,1065703..1065807,1067716..1067853,1069874..1069927,1072179..1072463,1082183..1082305,1087862..1088035,1089388..1089542,1090752..1090872,1092209..1092679,1094214..1094570,1095845..1096018,1099785..1100023,1101008..1101140,1115782..1116165,1119630..1119911,1121280..1121486,1125258..1125399,1131200..1131263,1133834..1134061,1144190..1144281,1151342..1151470,1155676..1155765,1163727..1163869))
location: region:1060989-1163869:-1
so has part: feature:1163727-1163869:-1:exon
so has part: feature:1155676-1155765:-1:exon
so has part: feature:1151342-1151470:-1:exon
so has part: feature:1144190-1144281:-1:exon
so has part: feature:1133834-1134061:-1:exon
so has part: feature:1131200-1131263:-1:exon
so has part: feature:1125258-1125399:-1:exon
so has part: feature:1121280-1121486:-1:exon
so has part: feature:1119630-1119911:-1:exon
so has part: feature:1115782-1116165:-1:exon
so has part: feature:1101008-1101140:-1:exon
so has part: feature:1099785-1100023:-1:exon
so has part: feature:1095845-1096018:-1:exon
so has part: feature:1094214-1094570:-1:exon
so has part: feature:1092209-1092679:-1:exon
so has part: feature:1090752-1090872:-1:exon
so has part: feature:1089388-1089542:-1:exon
so has part: feature:1087862-1088035:-1:exon
so has part: feature:1082183-1082305:-1:exon
so has part: feature:1072179-1072463:-1:exon
so has part: feature:1069874-1069927:-1:exon
so has part: feature:1067716-1067853:-1:exon
so has part: feature:1065703-1065807:-1:exon
so has part: feature:1062928-1063198:-1:exon
so has part: feature:1060989-1062148:-1:exon

XP_032871553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1163727-1163869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155676-1155765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1151342-1151470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144190-1144281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1133834-1134061:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131200-1131263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1125258-1125399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1121280-1121486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1119630-1119911:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115782-1116165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101008-1101140:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1099785-1100023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1095845-1096018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1094214-1094570:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092209-1092679:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1090752-1090872:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1089388-1089542:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1087862-1088035:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1082183-1082305:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1072179-1072463:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1069874-1069927:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1067716-1067853:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1065703-1065807:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1062928-1063198:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1060989-1062148:-1:exon

smarcd1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: smarcd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1456520..1502663)
location: region:1456520-1502663:-1
so has part: feature:1456520-1502663:-1:exon
subclass of: SO_0000010

116968795
type: Gene
SIO_000068: ncbigene

position:1456520:-1
position: 1456520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1502663:-1
position: 1502663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1456520-1502663:-1:exon

smarcd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: smarcd1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033015667.1
SIO_010081: smarcd1
subclass of: SO_0000673
so part of: smarcd1
location: complement(join(1456520..1456696,1470493..1470615,1472009..1472144,1473255..1473352,1477986..1478147,1481663..1481764,1483351..1483467,1484885..1485007,1488637..1488759,1489940..1489982,1491864..1492057,1502466..1502663))
location: region:1456520-1502663:-1
so has part: feature:1502466-1502663:-1:exon
so has part: feature:1491864-1492057:-1:exon
so has part: feature:1489940-1489982:-1:exon
so has part: feature:1488637-1488759:-1:exon
so has part: feature:1484885-1485007:-1:exon
so has part: feature:1483351-1483467:-1:exon
so has part: feature:1481663-1481764:-1:exon
so has part: feature:1477986-1478147:-1:exon
so has part: feature:1473255-1473352:-1:exon
so has part: feature:1472009-1472144:-1:exon
so has part: feature:1470493-1470615:-1:exon
so has part: feature:1456520-1456696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1502466-1502663:-1:exon

position:1502466:-1
position: 1502466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1491864-1492057:-1:exon

position:1491864:-1
position: 1491864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1492057:-1
position: 1492057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1489940-1489982:-1:exon

position:1489940:-1
position: 1489940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1489982:-1
position: 1489982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1488637-1488759:-1:exon

position:1488637:-1
position: 1488637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1488759:-1
position: 1488759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1484885-1485007:-1:exon

position:1484885:-1
position: 1484885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485007:-1
position: 1485007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1483351-1483467:-1:exon

position:1483351:-1
position: 1483351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483467:-1
position: 1483467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1481663-1481764:-1:exon

position:1481663:-1
position: 1481663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1481764:-1
position: 1481764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1477986-1478147:-1:exon

position:1477986:-1
position: 1477986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1478147:-1
position: 1478147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1473255-1473352:-1:exon

position:1473255:-1
position: 1473255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1473352:-1
position: 1473352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1472009-1472144:-1:exon

position:1472009:-1
position: 1472009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1472144:-1
position: 1472144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1470493-1470615:-1:exon

position:1470493:-1
position: 1470493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1470615:-1
position: 1470615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1456520-1456696:-1:exon

position:1456696:-1
position: 1456696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

smarcd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: smarcd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X3
translation: MAARGFQTMTAGAAAMAAGPGSGSGQVQASARMAPGQQQSMFRSAMPGQGYPRQGMPPSSRMPPQAASMGPPGPSYAGSPSVRPGMPQSMMDQSRKRPAPQQIQQVQQQAAQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDSAVSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDSHEREFINCDKYLQQIFECQRMKFSEIPQRLHALLMPPEPIIINHIISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKRTRRRENCRREHGGK
SIO_010081: smarcd1
subclass of: SO_0000673
so part of: smarcd1
location: complement(join(1456649..1456696,1470493..1470615,1472009..1472144,1473255..1473352,1477986..1478147,1481663..1481764,1483351..1483467,1484885..1485007,1488637..1488759,1489940..1489982,1491864..1492057,1502466..1502621))
location: region:1456649-1502621:-1
so has part: feature:1502466-1502621:-1:exon
so has part: feature:1491864-1492057:-1:exon
so has part: feature:1489940-1489982:-1:exon
so has part: feature:1488637-1488759:-1:exon
so has part: feature:1484885-1485007:-1:exon
so has part: feature:1483351-1483467:-1:exon
so has part: feature:1481663-1481764:-1:exon
so has part: feature:1477986-1478147:-1:exon
so has part: feature:1473255-1473352:-1:exon
so has part: feature:1472009-1472144:-1:exon
so has part: feature:1470493-1470615:-1:exon
so has part: feature:1456649-1456696:-1:exon

XP_032871558.1
type: Protein
SIO_000068: ncbiprotein

position:1456649:-1
position: 1456649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1502621:-1
position: 1502621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1502466-1502621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1491864-1492057:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1489940-1489982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1488637-1488759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1484885-1485007:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1483351-1483467:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1481663-1481764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1477986-1478147:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1473255-1473352:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1472009-1472144:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1470493-1470615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1456649-1456696:-1:exon

smarcd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: smarcd1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 21 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_033015664.1
SIO_010081: smarcd1
subclass of: SO_0000673
so part of: smarcd1
location: complement(join(1461388..1464581,1465710..1465811,1470493..1470615,1472009..1472144,1473255..1473352,1477986..1478147,1481663..1481764,1483351..1483467,1484885..1485007,1488637..1488759,1489940..1489982,1491864..1492057,1502466..1502653))
location: region:1461388-1502653:-1
so has part: feature:1502466-1502653:-1:exon
so has part: feature:1491864-1492057:-1:exon
so has part: feature:1489940-1489982:-1:exon
so has part: feature:1488637-1488759:-1:exon
so has part: feature:1484885-1485007:-1:exon
so has part: feature:1483351-1483467:-1:exon
so has part: feature:1481663-1481764:-1:exon
so has part: feature:1477986-1478147:-1:exon
so has part: feature:1473255-1473352:-1:exon
so has part: feature:1472009-1472144:-1:exon
so has part: feature:1470493-1470615:-1:exon
so has part: feature:1465710-1465811:-1:exon
so has part: feature:1461388-1464581:-1:exon

position:1461388:-1
position: 1461388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1502653:-1
position: 1502653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1502466-1502653:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1491864-1492057:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1489940-1489982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1488637-1488759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1484885-1485007:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1483351-1483467:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1481663-1481764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1477986-1478147:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1473255-1473352:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1472009-1472144:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1470493-1470615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1465710-1465811:-1:exon

position:1465710:-1
position: 1465710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1465811:-1
position: 1465811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1461388-1464581:-1:exon

position:1464581:-1
position: 1464581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

smarcd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: smarcd1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033015666.1
SIO_010081: smarcd1
subclass of: SO_0000673
so part of: smarcd1
location: complement(join(1462668..1464581,1465710..1465811,1470493..1470615,1472009..1472144,1473255..1473352,1477986..1478147,1481663..1481764,1483351..1483467,1484885..1485007,1488637..1488759,1489940..1489982,1491864..1492057,1493570..1493920))
location: region:1462668-1493920:-1
so has part: feature:1493570-1493920:-1:exon
so has part: feature:1491864-1492057:-1:exon
so has part: feature:1489940-1489982:-1:exon
so has part: feature:1488637-1488759:-1:exon
so has part: feature:1484885-1485007:-1:exon
so has part: feature:1483351-1483467:-1:exon
so has part: feature:1481663-1481764:-1:exon
so has part: feature:1477986-1478147:-1:exon
so has part: feature:1473255-1473352:-1:exon
so has part: feature:1472009-1472144:-1:exon
so has part: feature:1470493-1470615:-1:exon
so has part: feature:1465710-1465811:-1:exon
so has part: feature:1462668-1464581:-1:exon

position:1462668:-1
position: 1462668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493920:-1
position: 1493920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493570-1493920:-1:exon

position:1493570:-1
position: 1493570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1491864-1492057:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1489940-1489982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1488637-1488759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1484885-1485007:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1483351-1483467:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1481663-1481764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1477986-1478147:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1473255-1473352:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1472009-1472144:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1470493-1470615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1465710-1465811:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1462668-1464581:-1:exon

smarcd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: smarcd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
translation: MAARGFQTMTAGAAAMAAGPGSGSGQVQASARMAPGQQQSMFRSAMPGQGYPRQGMPPSSRMPPQAASMGPPGPSYAGSPSVRPGMPQSMMDQSRKRPAPQQIQQVQQQAAQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDSAVSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDSHEREFINCDKYLQQIFECQRMKFSEIPQRLHALLMPPEPIIINHIISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKSMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
SIO_010081: smarcd1
subclass of: SO_0000673
so part of: smarcd1
location: complement(join(1464528..1464581,1465710..1465811,1470493..1470615,1472009..1472144,1473255..1473352,1477986..1478147,1481663..1481764,1483351..1483467,1484885..1485007,1488637..1488759,1489940..1489982,1491864..1492057,1502466..1502621))
location: region:1464528-1502621:-1
so has part: feature:1502466-1502621:-1:exon
so has part: feature:1491864-1492057:-1:exon
so has part: feature:1489940-1489982:-1:exon
so has part: feature:1488637-1488759:-1:exon
so has part: feature:1484885-1485007:-1:exon
so has part: feature:1483351-1483467:-1:exon
so has part: feature:1481663-1481764:-1:exon
so has part: feature:1477986-1478147:-1:exon
so has part: feature:1473255-1473352:-1:exon
so has part: feature:1472009-1472144:-1:exon
so has part: feature:1470493-1470615:-1:exon
so has part: feature:1465710-1465811:-1:exon
so has part: feature:1464528-1464581:-1:exon

XP_032871555.1
type: Protein
SIO_000068: ncbiprotein

position:1464528:-1
position: 1464528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1502466-1502621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1491864-1492057:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1489940-1489982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1488637-1488759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1484885-1485007:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1483351-1483467:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1481663-1481764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1477986-1478147:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1473255-1473352:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1472009-1472144:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1470493-1470615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1465710-1465811:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1464528-1464581:-1:exon

smarcd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: smarcd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X2
translation: MQSSTRSKLFEFLASGMRQGMPPSSRMPPQAASMGPPGPSYAGSPSVRPGMPQSMMDQSRKRPAPQQIQQVQQQAAQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDSAVSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDSHEREFINCDKYLQQIFECQRMKFSEIPQRLHALLMPPEPIIINHIISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKSMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
SIO_010081: smarcd1
subclass of: SO_0000673
so part of: smarcd1
location: complement(join(1464528..1464581,1465710..1465811,1470493..1470615,1472009..1472144,1473255..1473352,1477986..1478147,1481663..1481764,1483351..1483467,1484885..1485007,1488637..1488759,1489940..1489982,1491864..1492057,1493570..1493620))
location: region:1464528-1493620:-1
so has part: feature:1493570-1493620:-1:exon
so has part: feature:1491864-1492057:-1:exon
so has part: feature:1489940-1489982:-1:exon
so has part: feature:1488637-1488759:-1:exon
so has part: feature:1484885-1485007:-1:exon
so has part: feature:1483351-1483467:-1:exon
so has part: feature:1481663-1481764:-1:exon
so has part: feature:1477986-1478147:-1:exon
so has part: feature:1473255-1473352:-1:exon
so has part: feature:1472009-1472144:-1:exon
so has part: feature:1470493-1470615:-1:exon
so has part: feature:1465710-1465811:-1:exon
so has part: feature:1464528-1464581:-1:exon

XP_032871557.1
type: Protein
SIO_000068: ncbiprotein

position:1493620:-1
position: 1493620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493570-1493620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1491864-1492057:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1489940-1489982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1488637-1488759:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1484885-1485007:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1483351-1483467:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1481663-1481764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1477986-1478147:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1473255-1473352:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1472009-1472144:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1470493-1470615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1465710-1465811:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1464528-1464581:-1:exon

asic1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: asic1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1512777..1904199)
location: region:1512777-1904199:-1
so has part: feature:1512777-1904199:-1:exon
subclass of: SO_0000010

116968721
type: Gene
SIO_000068: ncbigene

position:1512777:-1
position: 1512777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1904199:-1
position: 1904199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1512777-1904199:-1:exon

asic1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: asic1
product: acid sensing ion channel subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033015509.1
SIO_010081: asic1
subclass of: SO_0000673
so part of: asic1
location: complement(join(1512777..1513340,1514088..1514192,1516533..1516612,1519145..1519236,1531263..1531416,1546344..1546400,1555087..1555237,1556784..1556911,1558183..1558336,1903578..1904199))
location: region:1512777-1904199:-1
so has part: feature:1903578-1904199:-1:exon
so has part: feature:1558183-1558336:-1:exon
so has part: feature:1556784-1556911:-1:exon
so has part: feature:1555087-1555237:-1:exon
so has part: feature:1546344-1546400:-1:exon
so has part: feature:1531263-1531416:-1:exon
so has part: feature:1519145-1519236:-1:exon
so has part: feature:1516533-1516612:-1:exon
so has part: feature:1514088-1514192:-1:exon
so has part: feature:1512777-1513340:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1903578-1904199:-1:exon

position:1903578:-1
position: 1903578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1558183-1558336:-1:exon

position:1558183:-1
position: 1558183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1558336:-1
position: 1558336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1556784-1556911:-1:exon

position:1556784:-1
position: 1556784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1556911:-1
position: 1556911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1555087-1555237:-1:exon

position:1555087:-1
position: 1555087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1555237:-1
position: 1555237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1546344-1546400:-1:exon

position:1546344:-1
position: 1546344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1546400:-1
position: 1546400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1531263-1531416:-1:exon

position:1531263:-1
position: 1531263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531416:-1
position: 1531416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1519145-1519236:-1:exon

position:1519145:-1
position: 1519145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1519236:-1
position: 1519236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1516533-1516612:-1:exon

position:1516533:-1
position: 1516533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1516612:-1
position: 1516612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1514088-1514192:-1:exon

position:1514088:-1
position: 1514088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514192:-1
position: 1514192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1512777-1513340:-1:exon

position:1513340:-1
position: 1513340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

asic1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: asic1
product: acid sensing ion channel subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033015508.1
SIO_010081: asic1
subclass of: SO_0000673
so part of: asic1
location: complement(join(1512777..1513340,1514088..1514192,1516533..1516612,1519145..1519236,1531263..1531416,1546344..1546400,1555087..1555237,1556784..1556911,1558183..1558336,1610090..1610729))
location: region:1512777-1610729:-1
so has part: feature:1610090-1610729:-1:exon
so has part: feature:1558183-1558336:-1:exon
so has part: feature:1556784-1556911:-1:exon
so has part: feature:1555087-1555237:-1:exon
so has part: feature:1546344-1546400:-1:exon
so has part: feature:1531263-1531416:-1:exon
so has part: feature:1519145-1519236:-1:exon
so has part: feature:1516533-1516612:-1:exon
so has part: feature:1514088-1514192:-1:exon
so has part: feature:1512777-1513340:-1:exon

position:1610729:-1
position: 1610729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1610090-1610729:-1:exon

position:1610090:-1
position: 1610090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1558183-1558336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556784-1556911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1555087-1555237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1546344-1546400:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1531263-1531416:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1519145-1519236:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1516533-1516612:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1514088-1514192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1512777-1513340:-1:exon

asic1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: asic1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X2
translation: MDLKGEPEDAERTPPCSVQAFAGSSTLHGISHIFTYGRLSFRRAVWTLAFLGSLSLLAHVFVQRVRYYLEYPHVTKLDEISAYNLTFPAVTICNLNEFRFSKITKNDLYHAGELLALLNNKFEIPDPYVAEKHVLDVLVEKANFGNFKPKPFNMREFYDRAGHEMKDMLLDCKYRGKECTHQQFQVVFTRYGKCYTFNSGQTKDQPILTTLKGGTGNGLELMLDIQQDEYLPVWGETDETSFEAGIKVQIHGQNEPPFIDQLGFGVPPGFQTFVSCQEQRLIYLPPPWGDCKSTPMDSDFFDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYRECADPALGFLVEKDSLFCTCETPCNMTRYGKELSMVKIPSKASAKYLAKKYNKSEDYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASLLTILEVFDYVYEVLKHKLCGLLKYGKQQKRNNNNKGVTLSLDDIKRHNPCENLRTHPGGMTYPANILPHHPPRSTFEDFTC
SIO_010081: asic1
subclass of: SO_0000673
so part of: asic1
location: complement(join(1513236..1513340,1514088..1514192,1516533..1516612,1519145..1519236,1531263..1531416,1546344..1546400,1555087..1555237,1556784..1556911,1558183..1558336,1903578..1904135))
location: region:1513236-1904135:-1
so has part: feature:1903578-1904135:-1:exon
so has part: feature:1558183-1558336:-1:exon
so has part: feature:1556784-1556911:-1:exon
so has part: feature:1555087-1555237:-1:exon
so has part: feature:1546344-1546400:-1:exon
so has part: feature:1531263-1531416:-1:exon
so has part: feature:1519145-1519236:-1:exon
so has part: feature:1516533-1516612:-1:exon
so has part: feature:1514088-1514192:-1:exon
so has part: feature:1513236-1513340:-1:exon

XP_032871400.1
type: Protein
SIO_000068: ncbiprotein

position:1513236:-1
position: 1513236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1904135:-1
position: 1904135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1903578-1904135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1558183-1558336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556784-1556911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1555087-1555237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1546344-1546400:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1531263-1531416:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1519145-1519236:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1516533-1516612:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1514088-1514192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1513236-1513340:-1:exon

asic1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: asic1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X1
translation: MPVQIFCTISFSADDEEEEEVERKRGESFEQFSEDGEDEGGDGDGGKRSFTEFAGSTNLHGMNHIFVEQGGCGVRQLLWGCAFLSSLAIFLYQVMDRVMYYLEYHHITALDEIDSHFMYFPAITLCNFNRFRRSAITYSDLERIGPLVGFTRGMDLGFEAAGGGGSGPLSMYDLFNRTSHRLEDMLKECTYRAQECGPENFTVVFTRYGKCYTFNSGQTKDQPILTTLKGGTGNGLELMLDIQQDEYLPVWGETDETSFEAGIKVQIHGQNEPPFIDQLGFGVPPGFQTFVSCQEQRLIYLPPPWGDCKSTPMDSDFFDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYRECADPALGFLVEKDSLFCTCETPCNMTRYGKELSMVKIPSKASAKYLAKKYNKSEDYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASLLTILEVFDYVYEVLKHKLCGLLKYGKQQKRNNNNKGVTLSLDDIKRHNPCENLRTHPGGMTYPANILPHHPPRSTFEDFTC
SIO_010081: asic1
subclass of: SO_0000673
so part of: asic1
location: complement(join(1513236..1513340,1514088..1514192,1516533..1516612,1519145..1519236,1531263..1531416,1546344..1546400,1555087..1555237,1556784..1556911,1558183..1558336,1610090..1610698))
location: region:1513236-1610698:-1
so has part: feature:1610090-1610698:-1:exon
so has part: feature:1558183-1558336:-1:exon
so has part: feature:1556784-1556911:-1:exon
so has part: feature:1555087-1555237:-1:exon
so has part: feature:1546344-1546400:-1:exon
so has part: feature:1531263-1531416:-1:exon
so has part: feature:1519145-1519236:-1:exon
so has part: feature:1516533-1516612:-1:exon
so has part: feature:1514088-1514192:-1:exon
so has part: feature:1513236-1513340:-1:exon

XP_032871399.1
type: Protein
SIO_000068: ncbiprotein

position:1610698:-1
position: 1610698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1610090-1610698:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1558183-1558336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1556784-1556911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1555087-1555237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1546344-1546400:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1531263-1531416:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1519145-1519236:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1516533-1516612:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1514088-1514192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1513236-1513340:-1:exon

LOC116968745
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2003358..2054779)
location: region:2003358-2054779:-1
so has part: feature:2003358-2054779:-1:exon
subclass of: SO_0000010

116968745
type: Gene
SIO_000068: ncbigene

position:2003358:-1
position: 2003358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2054779:-1
position: 2054779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2003358-2054779:-1:exon

LOC116968745
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968745
product: tumor necrosis factor receptor superfamily member 14-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033015553.1
SIO_010081: LOC116968745
subclass of: SO_0000673
so part of: LOC116968745
location: complement(join(2003358..2003429,2036828..2036942,2038995..2039076,2041930..2042079,2046734..2046859,2049778..2049871,2054672..2054779))
location: region:2003358-2054779:-1
so has part: feature:2054672-2054779:-1:exon
so has part: feature:2049778-2049871:-1:exon
so has part: feature:2046734-2046859:-1:exon
so has part: feature:2041930-2042079:-1:exon
so has part: feature:2038995-2039076:-1:exon
so has part: feature:2036828-2036942:-1:exon
so has part: feature:2003358-2003429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2054672-2054779:-1:exon

position:2054672:-1
position: 2054672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2049778-2049871:-1:exon

position:2049778:-1
position: 2049778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2049871:-1
position: 2049871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2046734-2046859:-1:exon

position:2046734:-1
position: 2046734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2046859:-1
position: 2046859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2041930-2042079:-1:exon

position:2041930:-1
position: 2041930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2042079:-1
position: 2042079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2038995-2039076:-1:exon

position:2038995:-1
position: 2038995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2039076:-1
position: 2039076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2036828-2036942:-1:exon

position:2036828:-1
position: 2036828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2036942:-1
position: 2036942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2003358-2003429:-1:exon

position:2003429:-1
position: 2003429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 14-like
translation: MRAAWHLSVAFMAVNVAAMPGYSSNACQSKEYKYKDICCPECLPGSRVQEHCTPDSGTNCQNCSHGTYQPYYTGSKDCVNCAICGEGAEEIKACSSTHNCVCNCTEGHYCANITKNACARCLKHRSCPMTEMVVSKGTYWKDTECLPCAEGNCSPNDLRQNGKTGIVNGGTAGNVMRQNAMIILSAMFFTSQFFLQIFYLLEMGKVRVRETQYSTCQFSELSPLF
SIO_010081: LOC116968745
subclass of: SO_0000673
so part of: LOC116968745
location: complement(join(2003358..2003429,2036828..2036942,2038995..2039076,2041930..2042079,2046734..2046859,2049778..2049871,2054672..2054710))
location: region:2003358-2054710:-1
so has part: feature:2054672-2054710:-1:exon
so has part: feature:2049778-2049871:-1:exon
so has part: feature:2046734-2046859:-1:exon
so has part: feature:2041930-2042079:-1:exon
so has part: feature:2038995-2039076:-1:exon
so has part: feature:2036828-2036942:-1:exon
so has part: feature:2003358-2003429:-1:exon

XP_032871444.1
type: Protein
SIO_000068: ncbiprotein

position:2054710:-1
position: 2054710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2054672-2054710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2049778-2049871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2046734-2046859:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2041930-2042079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2038995-2039076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2036828-2036942:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2003358-2003429:-1:exon

LOC116968746
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2064910..2070035)
location: region:2064910-2070035:-1
so has part: feature:2064910-2070035:-1:exon
subclass of: SO_0000010

116968746
type: Gene
SIO_000068: ncbigene

position:2064910:-1
position: 2064910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2070035:-1
position: 2070035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2064910-2070035:-1:exon

LOC116968746
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968746
product: SPRY domain-containing protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_033015554.1
SIO_010081: LOC116968746
subclass of: SO_0000673
so part of: LOC116968746
location: complement(join(2064910..2065406,2069926..2070035))
location: region:2064910-2070035:-1
so has part: feature:2069926-2070035:-1:exon
so has part: feature:2064910-2065406:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2069926-2070035:-1:exon

position:2069926:-1
position: 2069926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2064910-2065406:-1:exon

position:2065406:-1
position: 2065406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968746
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPRY domain-containing protein 4-like
translation: MAAGRTMWGGMAMARLLQGSCFPSGQPRRYLNFKLDEKTAHCSLDLFKKETGVIYRMIGIDPTKAAKNPERFTDWAVVLADTPLSSGRHYWEVTVKRWQEFRIGVAETNMSREECIGADNCSWVYAYLQKKWYSMASSEMIPVDFFGKPDRVGFLLDCEVKTLSLIEIEKAAVSTIMTEFRAPLVPAFALCTSQ
SIO_010081: LOC116968746
subclass of: SO_0000673
so part of: LOC116968746
location: complement(join(2064910..2065406,2069926..2070013))
location: region:2064910-2070013:-1
so has part: feature:2069926-2070013:-1:exon
so has part: feature:2064910-2065406:-1:exon

XP_032871445.1
type: Protein
SIO_000068: ncbiprotein

position:2070013:-1
position: 2070013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2069926-2070013:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2064910-2065406:-1:exon

vdr
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: vdr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2089667..2211255)
location: region:2089667-2211255:-1
so has part: feature:2089667-2211255:-1:exon
subclass of: SO_0000010

116968814
type: Gene
SIO_000068: ncbigene

position:2089667:-1
position: 2089667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2211255:-1
position: 2211255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2089667-2211255:-1:exon

vdr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: vdr
product: vitamin D receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033015711.1
SIO_010081: vdr
subclass of: SO_0000673
so part of: vdr
location: complement(join(2089667..2090439,2095349..2095465,2099599..2099747,2118038..2118209,2120192..2120223,2121039..2121142,2121834..2122018,2133484..2133614,2139932..2140100,2161061..2161165,2211005..2211255))
location: region:2089667-2211255:-1
so has part: feature:2211005-2211255:-1:exon
so has part: feature:2161061-2161165:-1:exon
so has part: feature:2139932-2140100:-1:exon
so has part: feature:2133484-2133614:-1:exon
so has part: feature:2121834-2122018:-1:exon
so has part: feature:2121039-2121142:-1:exon
so has part: feature:2120192-2120223:-1:exon
so has part: feature:2118038-2118209:-1:exon
so has part: feature:2099599-2099747:-1:exon
so has part: feature:2095349-2095465:-1:exon
so has part: feature:2089667-2090439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2211005-2211255:-1:exon

position:2211005:-1
position: 2211005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2161061-2161165:-1:exon

position:2161061:-1
position: 2161061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2161165:-1
position: 2161165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2139932-2140100:-1:exon

position:2139932:-1
position: 2139932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2140100:-1
position: 2140100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2133484-2133614:-1:exon

position:2133484:-1
position: 2133484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2133614:-1
position: 2133614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2121834-2122018:-1:exon

position:2121834:-1
position: 2121834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2122018:-1
position: 2122018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2121039-2121142:-1:exon

position:2121039:-1
position: 2121039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2121142:-1
position: 2121142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2120192-2120223:-1:exon

position:2120192:-1
position: 2120192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2120223:-1
position: 2120223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2118038-2118209:-1:exon

position:2118038:-1
position: 2118038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2118209:-1
position: 2118209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2099599-2099747:-1:exon

position:2099599:-1
position: 2099599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2099747:-1
position: 2099747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2095349-2095465:-1:exon

position:2095349:-1
position: 2095349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2095465:-1
position: 2095465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2089667-2090439:-1:exon

position:2090439:-1
position: 2090439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

vdr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: vdr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor
translation: MEQMAVSTSAFHPEDDEFDRNCPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKKKATFTCPFNGNCSITKDNRRHCQACRLKRCQDIGMMKEFILTDEEVQRKKEIILKRKEEEAIKEAKKPKLSDDQEKTIALLMEAHHKTYDESYSDFNTFRPPVRSASEMEASGQSFPIESPQDLCSADYFDSFNSSPSDGCRLSMDMSQIAKSHFSSFFGIPQDDSGNSKEDSTLSMLPHLADLVSYSIQKVIGFAKAIPGFRELSADDQISLLKSSAIEIIMLRSNQSFTLEDMSWSCGNEFKYNINDVTKAGHSLELLEPLIKFQAGLKNLNLHEEEHVLLMAICLLSPDRSGLQDRARVERIQDKLSETLQVYIRVKHAPPGNWLLYPKMIQKLTDLRSLSDEHAKQYRSLTFHPAHNMQLTPLLLEVFSNEDQK
SIO_010081: vdr
subclass of: SO_0000673
so part of: vdr
location: complement(join(2090177..2090439,2095349..2095465,2099599..2099747,2118038..2118209,2120192..2120223,2121039..2121142,2121834..2122018,2133484..2133614,2139932..2140083))
location: region:2090177-2140083:-1
so has part: feature:2139932-2140083:-1:exon
so has part: feature:2133484-2133614:-1:exon
so has part: feature:2121834-2122018:-1:exon
so has part: feature:2121039-2121142:-1:exon
so has part: feature:2120192-2120223:-1:exon
so has part: feature:2118038-2118209:-1:exon
so has part: feature:2099599-2099747:-1:exon
so has part: feature:2095349-2095465:-1:exon
so has part: feature:2090177-2090439:-1:exon

XP_032871602.1
type: Protein
SIO_000068: ncbiprotein

position:2090177:-1
position: 2090177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2140083:-1
position: 2140083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2139932-2140083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2133484-2133614:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2121834-2122018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2121039-2121142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2120192-2120223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2118038-2118209:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2099599-2099747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2095349-2095465:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2090177-2090439:-1:exon

tmem106c
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tmem106c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2297956..2331402
location: region:2297956-2331402:1
so has part: feature:2297956-2331402:1:exon
subclass of: SO_0000010

116968827
type: Gene
SIO_000068: ncbigene

position:2297956:1
position: 2297956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2331402:1
position: 2331402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2297956-2331402:1:exon

tmem106c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tmem106c
product: transmembrane protein 106C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033015752.1
SIO_010081: tmem106c
subclass of: SO_0000673
so part of: tmem106c
location: join(2297956..2298213,2310807..2310870,2312742..2312901,2314343..2314483,2315706..2315755,2317369..2317422,2331003..2331402)
location: region:2297956-2331402:1
so has part: feature:2297956-2298213:1:exon
so has part: feature:2310807-2310870:1:exon
so has part: feature:2312742-2312901:1:exon
so has part: feature:2314343-2314483:1:exon
so has part: feature:2315706-2315755:1:exon
so has part: feature:2317369-2317422:1:exon
so has part: feature:2331003-2331402:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2297956-2298213:1:exon

position:2298213:1
position: 2298213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2310807-2310870:1:exon

position:2310807:1
position: 2310807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2310870:1
position: 2310870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2312742-2312901:1:exon

position:2312742:1
position: 2312742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2312901:1
position: 2312901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2314343-2314483:1:exon

position:2314343:1
position: 2314343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2314483:1
position: 2314483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2315706-2315755:1:exon

position:2315706:1
position: 2315706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2315755:1
position: 2315755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2317369-2317422:1:exon

position:2317369:1
position: 2317369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2317422:1
position: 2317422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2331003-2331402:1:exon

position:2331003:1
position: 2331003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem106c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tmem106c
product: transmembrane protein 106C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033015751.1
SIO_010081: tmem106c
subclass of: SO_0000673
so part of: tmem106c
location: join(2297956..2298213,2310807..2310870,2312742..2312901,2314343..2314483,2315706..2315755,2317369..2317422,2323241..2326037)
location: region:2297956-2326037:1
so has part: feature:2297956-2298213:1:exon
so has part: feature:2310807-2310870:1:exon
so has part: feature:2312742-2312901:1:exon
so has part: feature:2314343-2314483:1:exon
so has part: feature:2315706-2315755:1:exon
so has part: feature:2317369-2317422:1:exon
so has part: feature:2323241-2326037:1:exon

position:2326037:1
position: 2326037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2297956-2298213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2310807-2310870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2312742-2312901:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2314343-2314483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2315706-2315755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2317369-2317422:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2323241-2326037:1:exon

position:2323241:1
position: 2323241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem106c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tmem106c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C isoform X2
translation: MGLQMSVRASKGSQRKERALDGDDGEDLLGDSDDRQEDIARFPYVEFTGKDSVTCPTCQGTGRIPKGQINELVALIPYSDQRLQPQRTKLYVFISIFLCLFISGLVVFFLFPRSVVVSDDGIRVVIVTFDRNNSRVVIDMTSTLNISNSNFYTVSVDTLTSQVQYMKTVIGTKQMNNVSVIPPLSEKQVNYTVQLEFRGALNYVYTFCTMPSIKVHNIVVFMHVHCVPGERVVK
SIO_010081: tmem106c
subclass of: SO_0000673
so part of: tmem106c
location: join(2298015..2298213,2310807..2310870,2312742..2312901,2314343..2314483,2315706..2315755,2317369..2317422,2331003..2331039)
location: region:2298015-2331039:1
so has part: feature:2298015-2298213:1:exon
so has part: feature:2310807-2310870:1:exon
so has part: feature:2312742-2312901:1:exon
so has part: feature:2314343-2314483:1:exon
so has part: feature:2315706-2315755:1:exon
so has part: feature:2317369-2317422:1:exon
so has part: feature:2331003-2331039:1:exon

XP_032871643.1
type: Protein
SIO_000068: ncbiprotein

position:2298015:1
position: 2298015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2331039:1
position: 2331039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2298015-2298213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2310807-2310870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2312742-2312901:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2314343-2314483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2315706-2315755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2317369-2317422:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2331003-2331039:1:exon

tmem106c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tmem106c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C isoform X1
translation: MGLQMSVRASKGSQRKERALDGDDGEDLLGDSDDRQEDIARFPYVEFTGKDSVTCPTCQGTGRIPKGQINELVALIPYSDQRLQPQRTKLYVFISIFLCLFISGLVVFFLFPRSVVVSDDGIRVVIVTFDRNNSRVVIDMTSTLNISNSNFYTVSVDTLTSQVQYMKTVIGTKQMNNVSVIPPLSEKQVNYTVQLEFRGALNYVYTFCTMPSIKVHNIVVFMQTTVKSSYLGHPSQNSLEAYRYLDCGSNSTAYRRPSLNH
SIO_010081: tmem106c
subclass of: SO_0000673
so part of: tmem106c
location: join(2298015..2298213,2310807..2310870,2312742..2312901,2314343..2314483,2315706..2315755,2317369..2317422,2323241..2323358)
location: region:2298015-2323358:1
so has part: feature:2298015-2298213:1:exon
so has part: feature:2310807-2310870:1:exon
so has part: feature:2312742-2312901:1:exon
so has part: feature:2314343-2314483:1:exon
so has part: feature:2315706-2315755:1:exon
so has part: feature:2317369-2317422:1:exon
so has part: feature:2323241-2323358:1:exon

XP_032871642.1
type: Protein
SIO_000068: ncbiprotein

position:2323358:1
position: 2323358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2298015-2298213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2310807-2310870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2312742-2312901:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2314343-2314483:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2315706-2315755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2317369-2317422:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2323241-2323358:1:exon

LOC116968829
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2331464..2344907
location: region:2331464-2344907:1
so has part: feature:2331464-2344907:1:exon
subclass of: SO_0000011

116968829
type: Gene
SIO_000068: ncbigene

position:2331464:1
position: 2331464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2344907:1
position: 2344907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2331464-2344907:1:exon

LOC116968829
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968829
product: uncharacterized LOC116968829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004410538.1
SIO_010081: LOC116968829
subclass of: SO_0000673
so part of: LOC116968829
location: join(2331464..2331726,2339326..2339328,2344896..2344907)
location: region:2331464-2344907:1
so has part: feature:2331464-2331726:1:exon
so has part: feature:2339326-2339328:1:exon
so has part: feature:2344896-2344907:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2331464-2331726:1:exon

position:2331726:1
position: 2331726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2339326-2339328:1:exon

position:2339326:1
position: 2339326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2339328:1
position: 2339328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2344896-2344907:1:exon

position:2344896:1
position: 2344896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968826
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2332570..2408057)
location: region:2332570-2408057:-1
so has part: feature:2332570-2408057:-1:exon
subclass of: SO_0000010

116968826
type: Gene
SIO_000068: ncbigene

position:2332570:-1
position: 2332570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2408057:-1
position: 2408057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2332570-2408057:-1:exon

LOC116968826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968826
product: collagen alpha-1(II) chain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033015747.1
SIO_010081: LOC116968826
subclass of: SO_0000673
so part of: LOC116968826
location: complement(join(2332570..2333978,2334484..2334726,2335573..2335754,2336169..2336457,2336731..2336838,2338384..2338437,2339494..2339601,2340192..2340245,2340449..2340556,2342730..2342783,2342869..2342976,2348737..2348844,2349316..2349477,2350174..2350227,2352255..2352308,2352398..2352505,2354294..2354347,2357060..2357113,2357509..2357562,2358781..2358834,2359489..2359596,2359690..2359788,2363006..2363050,2363292..2363345,2364147..2364200,2365701..2365754,2367184..2367237,2367407..2367505,2369440..2369493,2369761..2369859,2370985..2371038,2372275..2372382,2372852..2372905,2374430..2374528,2375501..2375545,2376154..2376252,2380448..2380501,2381915..2381959,2382762..2382815,2383023..2383067,2385897..2385950,2386530..2386583,2387504..2387557,2387661..2387714,2388477..2388530,2388685..2388729,2395055..2395132,2398172..2398273,2398494..2398547,2398658..2398690,2399269..2399301,2403012..2403028,2404422..2404631,2407781..2408055))
location: region:2332570-2408055:-1
so has part: feature:2407781-2408055:-1:exon
so has part: feature:2404422-2404631:-1:exon
so has part: feature:2403012-2403028:-1:exon
so has part: feature:2399269-2399301:-1:exon
so has part: feature:2398658-2398690:-1:exon
so has part: feature:2398494-2398547:-1:exon
so has part: feature:2398172-2398273:-1:exon
so has part: feature:2395055-2395132:-1:exon
so has part: feature:2388685-2388729:-1:exon
so has part: feature:2388477-2388530:-1:exon
so has part: feature:2387661-2387714:-1:exon
so has part: feature:2387504-2387557:-1:exon
so has part: feature:2386530-2386583:-1:exon
so has part: feature:2385897-2385950:-1:exon
so has part: feature:2383023-2383067:-1:exon
so has part: feature:2382762-2382815:-1:exon
so has part: feature:2381915-2381959:-1:exon
so has part: feature:2380448-2380501:-1:exon
so has part: feature:2376154-2376252:-1:exon
so has part: feature:2375501-2375545:-1:exon
so has part: feature:2374430-2374528:-1:exon
so has part: feature:2372852-2372905:-1:exon
so has part: feature:2372275-2372382:-1:exon
so has part: feature:2370985-2371038:-1:exon
so has part: feature:2369761-2369859:-1:exon
so has part: feature:2369440-2369493:-1:exon
so has part: feature:2367407-2367505:-1:exon
so has part: feature:2367184-2367237:-1:exon
so has part: feature:2365701-2365754:-1:exon
so has part: feature:2364147-2364200:-1:exon
so has part: feature:2363292-2363345:-1:exon
so has part: feature:2363006-2363050:-1:exon
so has part: feature:2359690-2359788:-1:exon
so has part: feature:2359489-2359596:-1:exon
so has part: feature:2358781-2358834:-1:exon
so has part: feature:2357509-2357562:-1:exon
so has part: feature:2357060-2357113:-1:exon
so has part: feature:2354294-2354347:-1:exon
so has part: feature:2352398-2352505:-1:exon
so has part: feature:2352255-2352308:-1:exon
so has part: feature:2350174-2350227:-1:exon
so has part: feature:2349316-2349477:-1:exon
so has part: feature:2348737-2348844:-1:exon
so has part: feature:2342869-2342976:-1:exon
so has part: feature:2342730-2342783:-1:exon
so has part: feature:2340449-2340556:-1:exon
so has part: feature:2340192-2340245:-1:exon
so has part: feature:2339494-2339601:-1:exon
so has part: feature:2338384-2338437:-1:exon
so has part: feature:2336731-2336838:-1:exon
so has part: feature:2336169-2336457:-1:exon
so has part: feature:2335573-2335754:-1:exon
so has part: feature:2334484-2334726:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:2407781-2408055:-1:exon

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urn:…
SIO_000300: 2
SIO_000628: feature:2404422-2404631:-1:exon

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urn:…
SIO_000300: 3
SIO_000628: feature:2403012-2403028:-1:exon

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urn:…
SIO_000300: 4
SIO_000628: feature:2399269-2399301:-1:exon

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urn:…
SIO_000300: 5
SIO_000628: feature:2398658-2398690:-1:exon

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urn:…
SIO_000300: 6
SIO_000628: feature:2398494-2398547:-1:exon

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urn:…
SIO_000300: 7
SIO_000628: feature:2398172-2398273:-1:exon

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urn:…
SIO_000300: 8
SIO_000628: feature:2395055-2395132:-1:exon

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urn:…
SIO_000300: 9
SIO_000628: feature:2388685-2388729:-1:exon

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urn:…
SIO_000300: 10
SIO_000628: feature:2388477-2388530:-1:exon

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urn:…
SIO_000300: 11
SIO_000628: feature:2387661-2387714:-1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:2387504-2387557:-1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:2386530-2386583:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:2385897-2385950:-1:exon

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urn:…
SIO_000300: 15
SIO_000628: feature:2383023-2383067:-1:exon

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urn:…
SIO_000300: 16
SIO_000628: feature:2382762-2382815:-1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:2381915-2381959:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:2380448-2380501:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:2376154-2376252:-1:exon

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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:2374430-2374528:-1:exon

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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:2372275-2372382:-1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:2370985-2371038:-1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:2369761-2369859:-1:exon

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urn:…
SIO_000300: 26
SIO_000628: feature:2369440-2369493:-1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:2367407-2367505:-1:exon

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urn:…
SIO_000300: 28
SIO_000628: feature:2367184-2367237:-1:exon

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urn:…
SIO_000300: 29
SIO_000628: feature:2365701-2365754:-1:exon

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urn:…
SIO_000300: 30
SIO_000628: feature:2364147-2364200:-1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:2363292-2363345:-1:exon

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urn:…
SIO_000300: 32
SIO_000628: feature:2363006-2363050:-1:exon

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urn:…
SIO_000300: 33
SIO_000628: feature:2359690-2359788:-1:exon

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urn:…
SIO_000300: 34
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urn:…
SIO_000300: 35
SIO_000628: feature:2358781-2358834:-1:exon

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urn:…
SIO_000300: 36
SIO_000628: feature:2357509-2357562:-1:exon

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urn:…
SIO_000300: 37
SIO_000628: feature:2357060-2357113:-1:exon

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urn:…
SIO_000300: 38
SIO_000628: feature:2354294-2354347:-1:exon

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SIO_000300: 39
SIO_000628: feature:2352398-2352505:-1:exon

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SIO_000300: 40
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SIO_000300: 41
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SIO_000300: 42
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SIO_000300: 43
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SIO_000300: 44
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SIO_000300: 45
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SIO_000300: 46
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SIO_000300: 47
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SIO_000300: 48
SIO_000628: feature:2339494-2339601:-1:exon

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SIO_000300: 49
SIO_000628: feature:2338384-2338437:-1:exon

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SIO_000300: 50
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SIO_000300: 51
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urn:…
SIO_000300: 52
SIO_000628: feature:2335573-2335754:-1:exon

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urn:…
SIO_000300: 53
SIO_000628: feature:2334484-2334726:-1:exon

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urn:…
SIO_000300: 54
SIO_000628: feature:2332570-2333978:-1:exon

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LOC116968826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968826
product: collagen alpha-1(II) chain, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_033015749.1
SIO_010081: LOC116968826
subclass of: SO_0000673
so part of: LOC116968826
location: complement(join(2332570..2333978,2334484..2334726,2335573..2335754,2336169..2336457,2336731..2336838,2338384..2338437,2339494..2339601,2340192..2340245,2340449..2340556,2342730..2342783,2342869..2342976,2348737..2348844,2349316..2349477,2350174..2350227,2352255..2352308,2352398..2352505,2354294..2354347,2357060..2357113,2357509..2357562,2358781..2358834,2359489..2359596,2359690..2359788,2363006..2363050,2363292..2363345,2364147..2364200,2365701..2365754,2367184..2367237,2367407..2367505,2369440..2369493,2369761..2369859,2370985..2371038,2375501..2375545,2376154..2376252,2380448..2380501,2381915..2381959,2382762..2382815,2383023..2383067,2385897..2385950,2386530..2386583,2387504..2387557,2387661..2387714,2388477..2388530,2388685..2388729,2395055..2395132,2398172..2398273,2398494..2398547,2398658..2398690,2399269..2399301,2403012..2403028,2404422..2404634,2407781..2408055))
location: region:2332570-2408055:-1
so has part: feature:2407781-2408055:-1:exon
so has part: feature:2404422-2404634:-1:exon
so has part: feature:2403012-2403028:-1:exon
so has part: feature:2399269-2399301:-1:exon
so has part: feature:2398658-2398690:-1:exon
so has part: feature:2398494-2398547:-1:exon
so has part: feature:2398172-2398273:-1:exon
so has part: feature:2395055-2395132:-1:exon
so has part: feature:2388685-2388729:-1:exon
so has part: feature:2388477-2388530:-1:exon
so has part: feature:2387661-2387714:-1:exon
so has part: feature:2387504-2387557:-1:exon
so has part: feature:2386530-2386583:-1:exon
so has part: feature:2385897-2385950:-1:exon
so has part: feature:2383023-2383067:-1:exon
so has part: feature:2382762-2382815:-1:exon
so has part: feature:2381915-2381959:-1:exon
so has part: feature:2380448-2380501:-1:exon
so has part: feature:2376154-2376252:-1:exon
so has part: feature:2375501-2375545:-1:exon
so has part: feature:2370985-2371038:-1:exon
so has part: feature:2369761-2369859:-1:exon
so has part: feature:2369440-2369493:-1:exon
so has part: feature:2367407-2367505:-1:exon
so has part: feature:2367184-2367237:-1:exon
so has part: feature:2365701-2365754:-1:exon
so has part: feature:2364147-2364200:-1:exon
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so has part: feature:2357060-2357113:-1:exon
so has part: feature:2354294-2354347:-1:exon
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so has part: feature:2350174-2350227:-1:exon
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so has part: feature:2332570-2333978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2407781-2408055:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2404422-2404634:-1:exon

position:2404634:-1
position: 2404634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2403012-2403028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2399269-2399301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2398658-2398690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2398494-2398547:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2398172-2398273:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2395055-2395132:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2388685-2388729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2388477-2388530:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2387661-2387714:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2387504-2387557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2386530-2386583:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2385897-2385950:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2383023-2383067:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2382762-2382815:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2381915-2381959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2380448-2380501:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2376154-2376252:-1:exon

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LOC116968826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968826
product: collagen alpha-1(II) chain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033015745.1
SIO_010081: LOC116968826
subclass of: SO_0000673
so part of: LOC116968826
location: complement(join(2332570..2333978,2334484..2334726,2335573..2335754,2336169..2336457,2336731..2336838,2338384..2338437,2339494..2339601,2340192..2340245,2340449..2340556,2342730..2342783,2342869..2342976,2348737..2348844,2349316..2349477,2350174..2350227,2352255..2352308,2352398..2352505,2354294..2354347,2357060..2357113,2357509..2357562,2358781..2358834,2359489..2359596,2359690..2359788,2363006..2363050,2363292..2363345,2364147..2364200,2365701..2365754,2367184..2367237,2367407..2367505,2369440..2369493,2369761..2369859,2370985..2371038,2372275..2372382,2372852..2372905,2374430..2374528,2375501..2375545,2376154..2376252,2380448..2380501,2381915..2381959,2382762..2382815,2383023..2383067,2385897..2385950,2386530..2386583,2387504..2387557,2387661..2387714,2388477..2388530,2388685..2388729,2395055..2395132,2398172..2398273,2398494..2398547,2398658..2398690,2399269..2399301,2403012..2403028,2404422..2404634,2407781..2408055))
location: region:2332570-2408055:-1
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LOC116968826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968826
product: collagen alpha-1(II) chain, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_033015748.1
SIO_010081: LOC116968826
subclass of: SO_0000673
so part of: LOC116968826
location: complement(join(2332570..2333978,2334484..2334726,2335573..2335754,2336169..2336457,2336731..2336838,2338384..2338437,2339494..2339601,2340192..2340245,2340449..2340556,2342730..2342783,2342869..2342976,2348737..2348844,2349316..2349477,2350174..2350227,2352255..2352308,2352398..2352505,2354294..2354347,2357060..2357113,2357509..2357562,2358781..2358834,2359489..2359596,2359690..2359788,2363006..2363050,2363292..2363345,2364147..2364200,2365701..2365754,2367184..2367237,2367407..2367505,2369440..2369493,2369761..2369859,2370985..2371038,2372275..2372382,2372852..2372905,2374430..2374528,2375501..2375545,2376154..2376252,2380448..2380501,2381915..2381959,2382762..2382815,2383023..2383067,2385897..2385950,2386530..2386583,2387504..2387557,2387661..2387714,2388477..2388530,2388685..2388729,2395055..2395132,2398172..2398273,2398494..2398547,2398658..2398690,2399269..2399301,2403012..2403028,2407781..2408054))
location: region:2332570-2408054:-1
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position:2408054:-1
position: 2408054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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SIO_000628: feature:2338384-2338437:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2336731-2336838:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2336169-2336457:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2335573-2335754:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2334484-2334726:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2332570-2333978:-1:exon

LOC116968826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(II) chain isoform X3
translation: MFRFVDARTFVLLAATQAILLTVVKCQHSHTRQRGPRGQKGEPGDIKDVVGPNGPPGPQGPSGEQGVRGLRGEKGELGVAGPRGRDGEPGTPGNPGPPGLPGTSGRSDFGGSFASQMARGFDEKAGGAQMGVMQGPMGPMGPRGPPGPTGVPGPQGFQGSAGEAGESGAAGPMGPRGPPGPSGKPGDDGAAGKAGKPGDRGAPGPQGARGFPGTPGLPGVKGHRGYSGLDGAKGETGAAGAKGESGAAGENGSPGPMGPRGLPGERGRPGSPGSAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGSRGESGTPGSPGPAGAPGNPGTDGIPGSKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTQGDPGATGFKGETGPKGEIGPVGPQGAPGPAGEEGKRGPRGEPGAAGPNGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVAGVSGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGATGASGEDGRPGPPGPQGARGQPGVMGFPGPKGATGNAGKAGEKGLLGAPGLRGLPGKDGETGAQGPPGPSGIAGERGEQGPPGPPGFQGLPGPPGPPGEGGKPGDQGVPGEAGAAGPTGPRGERGFPGERGSPGSQGLQGPRGLPGTPGADGPKGAGGAPGPNGAQGPPGLQGMPGERGTAGIPGPKGDRGDSGGKGPEGAPGKDGGRGLTGPIGPPGPSGPNGLKGETGPRGPTGTAGARGSPGERGETGPPGPAGFAGPPGSDGQAGQKGEPGETGQKGDAGAPGPQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPVGPAGAPGKDGPKGLRGDPGQAGRAGDPGLQGPAGTPGEKGEPGEDGPPGPDGPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPSGLTGPSGEPGREGNPGADGPPGRDGSNGPKGERGQTGVAGAPGASGAPGAPGPVGPTGKQGNRGESGAQGPMGPSGPSGARGMPGPQGPRGDKGEAGEAGERGQKGHRGFTGLQGLPGPPGPGGDQGAVGAAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGESGPSGPPGNSGPPGPPGPPGPGIDMSAFAGLSQPEKAPDPLRYFRADQAAPLLRQHDAEVDATLKSLNNQMENIRSPEGSKKNPARTCRDLKLCHSDWKSGDYWVDPNQGCTLDAIKVFCNMETGETCVYPNPASIPRKNWWTSKGKKHVWFGETMNGGFHFSYGDGSLTANTAAIQMTFLRLLSTEASQNITYHCKNSIAYMDRATGNLKKALLLQGSNDIEIRAEGNSRFTYTVLEDGCTKHTGKWGKTVIEYRSQKTTRLPIVDVAPLDIGGSDQEFGVDIGAVCFL
SIO_010081: LOC116968826
subclass of: SO_0000673
so part of: LOC116968826
location: complement(join(2333832..2333978,2334484..2334726,2335573..2335754,2336169..2336457,2336731..2336838,2338384..2338437,2339494..2339601,2340192..2340245,2340449..2340556,2342730..2342783,2342869..2342976,2348737..2348844,2349316..2349477,2350174..2350227,2352255..2352308,2352398..2352505,2354294..2354347,2357060..2357113,2357509..2357562,2358781..2358834,2359489..2359596,2359690..2359788,2363006..2363050,2363292..2363345,2364147..2364200,2365701..2365754,2367184..2367237,2367407..2367505,2369440..2369493,2369761..2369859,2370985..2371038,2372275..2372382,2372852..2372905,2374430..2374528,2375501..2375545,2376154..2376252,2380448..2380501,2381915..2381959,2382762..2382815,2383023..2383067,2385897..2385950,2386530..2386583,2387504..2387557,2387661..2387714,2388477..2388530,2388685..2388729,2395055..2395132,2398172..2398273,2398494..2398547,2398658..2398690,2399269..2399301,2403012..2403028,2407781..2407874))
location: region:2333832-2407874:-1
so has part: feature:2407781-2407874:-1:exon
so has part: feature:2403012-2403028:-1:exon
so has part: feature:2399269-2399301:-1:exon
so has part: feature:2398658-2398690:-1:exon
so has part: feature:2398494-2398547:-1:exon
so has part: feature:2398172-2398273:-1:exon
so has part: feature:2395055-2395132:-1:exon
so has part: feature:2388685-2388729:-1:exon
so has part: feature:2388477-2388530:-1:exon
so has part: feature:2387661-2387714:-1:exon
so has part: feature:2387504-2387557:-1:exon
so has part: feature:2386530-2386583:-1:exon
so has part: feature:2385897-2385950:-1:exon
so has part: feature:2383023-2383067:-1:exon
so has part: feature:2382762-2382815:-1:exon
so has part: feature:2381915-2381959:-1:exon
so has part: feature:2380448-2380501:-1:exon
so has part: feature:2376154-2376252:-1:exon
so has part: feature:2375501-2375545:-1:exon
so has part: feature:2374430-2374528:-1:exon
so has part: feature:2372852-2372905:-1:exon
so has part: feature:2372275-2372382:-1:exon
so has part: feature:2370985-2371038:-1:exon
so has part: feature:2369761-2369859:-1:exon
so has part: feature:2369440-2369493:-1:exon
so has part: feature:2367407-2367505:-1:exon
so has part: feature:2367184-2367237:-1:exon
so has part: feature:2365701-2365754:-1:exon
so has part: feature:2364147-2364200:-1:exon
so has part: feature:2363292-2363345:-1:exon
so has part: feature:2363006-2363050:-1:exon
so has part: feature:2359690-2359788:-1:exon
so has part: feature:2359489-2359596:-1:exon
so has part: feature:2358781-2358834:-1:exon
so has part: feature:2357509-2357562:-1:exon
so has part: feature:2357060-2357113:-1:exon
so has part: feature:2354294-2354347:-1:exon
so has part: feature:2352398-2352505:-1:exon
so has part: feature:2352255-2352308:-1:exon
so has part: feature:2350174-2350227:-1:exon
so has part: feature:2349316-2349477:-1:exon
so has part: feature:2348737-2348844:-1:exon
so has part: feature:2342869-2342976:-1:exon
so has part: feature:2342730-2342783:-1:exon
so has part: feature:2340449-2340556:-1:exon
so has part: feature:2340192-2340245:-1:exon
so has part: feature:2339494-2339601:-1:exon
so has part: feature:2338384-2338437:-1:exon
so has part: feature:2336731-2336838:-1:exon
so has part: feature:2336169-2336457:-1:exon
so has part: feature:2335573-2335754:-1:exon
so has part: feature:2334484-2334726:-1:exon
so has part: feature:2333832-2333978:-1:exon

XP_032871639.1
type: Protein
SIO_000068: ncbiprotein

position:2333832:-1
position: 2333832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2407874:-1
position: 2407874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2407781-2407874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2403012-2403028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2399269-2399301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2398658-2398690:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2398494-2398547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2398172-2398273:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2395055-2395132:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2388685-2388729:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2388477-2388530:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2387661-2387714:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2387504-2387557:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2386530-2386583:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2385897-2385950:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2383023-2383067:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2382762-2382815:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2381915-2381959:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2380448-2380501:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2376154-2376252:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2375501-2375545:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2374430-2374528:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2372852-2372905:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2372275-2372382:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2370985-2371038:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2369761-2369859:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2369440-2369493:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2367407-2367505:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2367184-2367237:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2365701-2365754:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2364147-2364200:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2363292-2363345:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2363006-2363050:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2359690-2359788:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2359489-2359596:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2358781-2358834:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2357509-2357562:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2357060-2357113:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2354294-2354347:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2352398-2352505:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2352255-2352308:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2350174-2350227:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2349316-2349477:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2348737-2348844:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2342869-2342976:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2342730-2342783:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2340449-2340556:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2340192-2340245:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2339494-2339601:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2338384-2338437:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2336731-2336838:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2336169-2336457:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2335573-2335754:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2334484-2334726:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2333832-2333978:-1:exon

LOC116968826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(II) chain isoform X2
translation: MFRFVDARTFVLLAATQAILLTVVKCQHSHTRLKSTCIQDGQTYSDKDVWKPRPCSICVCDTGIILCDDIICEDIKDCPNPEIPFGECCPVCLNQRPPPIDRQRGPRGQKGEPGDIKDVVGPNGPPGPQGPSGEQGVRGLRGEKGELGVAGPRGRDGEPGTPGNPGPPGLPGTSGRSDFGGSFASQMARGFDEKAGGAQMGVMQGPMGPMGPRGPPGPTGVPGPQGFQGSAGEAGESGAAGPMGPRGPPGPSGKPGDDGAAGKAGKPGDRGAPGPQGARGFPGTPGLPGVKGHRGYSGLDGAKGETGAAGAKGESGAAGENGSPGPMGPRGLPGERGRPGSPGSAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGSRGESGTPGSPGPAGAPGNPGTDGIPGSKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTQGDPGATGFKGETGPKGEIGPVGPQGAPGPAGEEGKRGPRGEPGAAGPNGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVAGVSGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGATGASGEDGRPGPPGPQGARGQPGVMGFPGPKGATGNAGKAGEKGLLGAPGLRGLPGKDGETGAQGPPGPSGIAGERGEQGPPGPPGFQGLPGPPGPPGEGGKPGDQGVPGEAGAAGPTGPRGERGFPGERGSPGSQGLQGPRGLPGTPGADGPKGAGGAPGPNGAQGPPGLQGMPGERGTAGIPGPKGDRGDSGGKGPEGAPGKDGGRGLTGPIGPPGPSGPNGLKGETGPRGPTGTAGARGSPGERGETGPPGPAGFAGPPGSDGQAGQKGEPGETGQKGDAGAPGPQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPVGPAGAPGKDGPKGLRGDPGQAGRAGDPGLQGPAGTPGEKGEPGEDGPPGPDGPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPSGLTGPSGEPGREGNPGADGPPGRDGSNGPKGERGQTGVAGAPGASGAPGAPGPVGPTGKQGNRGESGAQGPMGPSGPSGARGMPGPQGPRGDKGEAGEAGERGQKGHRGFTGLQGLPGPPGPGGDQGAVGAAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGESGPSGPPGNSGPPGPPGPPGPGIDMSAFAGLSQPEKAPDPLRYFRADQAAPLLRQHDAEVDATLKSLNNQMENIRSPEGSKKNPARTCRDLKLCHSDWKSGDYWVDPNQGCTLDAIKVFCNMETGETCVYPNPASIPRKNWWTSKGKKHVWFGETMNGGFHFSYGDGSLTANTAAIQMTFLRLLSTEASQNITYHCKNSIAYMDRATGNLKKALLLQGSNDIEIRAEGNSRFTYTVLEDGCTKHTGKWGKTVIEYRSQKTTRLPIVDVAPLDIGGSDQEFGVDIGAVCFL
SIO_010081: LOC116968826
subclass of: SO_0000673
so part of: LOC116968826
location: complement(join(2333832..2333978,2334484..2334726,2335573..2335754,2336169..2336457,2336731..2336838,2338384..2338437,2339494..2339601,2340192..2340245,2340449..2340556,2342730..2342783,2342869..2342976,2348737..2348844,2349316..2349477,2350174..2350227,2352255..2352308,2352398..2352505,2354294..2354347,2357060..2357113,2357509..2357562,2358781..2358834,2359489..2359596,2359690..2359788,2363006..2363050,2363292..2363345,2364147..2364200,2365701..2365754,2367184..2367237,2367407..2367505,2369440..2369493,2369761..2369859,2370985..2371038,2372275..2372382,2372852..2372905,2374430..2374528,2375501..2375545,2376154..2376252,2380448..2380501,2381915..2381959,2382762..2382815,2383023..2383067,2385897..2385950,2386530..2386583,2387504..2387557,2387661..2387714,2388477..2388530,2388685..2388729,2395055..2395132,2398172..2398273,2398494..2398547,2398658..2398690,2399269..2399301,2403012..2403028,2404422..2404631,2407781..2407874))
location: region:2333832-2407874:-1
so has part: feature:2407781-2407874:-1:exon
so has part: feature:2404422-2404631:-1:exon
so has part: feature:2403012-2403028:-1:exon
so has part: feature:2399269-2399301:-1:exon
so has part: feature:2398658-2398690:-1:exon
so has part: feature:2398494-2398547:-1:exon
so has part: feature:2398172-2398273:-1:exon
so has part: feature:2395055-2395132:-1:exon
so has part: feature:2388685-2388729:-1:exon
so has part: feature:2388477-2388530:-1:exon
so has part: feature:2387661-2387714:-1:exon
so has part: feature:2387504-2387557:-1:exon
so has part: feature:2386530-2386583:-1:exon
so has part: feature:2385897-2385950:-1:exon
so has part: feature:2383023-2383067:-1:exon
so has part: feature:2382762-2382815:-1:exon
so has part: feature:2381915-2381959:-1:exon
so has part: feature:2380448-2380501:-1:exon
so has part: feature:2376154-2376252:-1:exon
so has part: feature:2375501-2375545:-1:exon
so has part: feature:2374430-2374528:-1:exon
so has part: feature:2372852-2372905:-1:exon
so has part: feature:2372275-2372382:-1:exon
so has part: feature:2370985-2371038:-1:exon
so has part: feature:2369761-2369859:-1:exon
so has part: feature:2369440-2369493:-1:exon
so has part: feature:2367407-2367505:-1:exon
so has part: feature:2367184-2367237:-1:exon
so has part: feature:2365701-2365754:-1:exon
so has part: feature:2364147-2364200:-1:exon
so has part: feature:2363292-2363345:-1:exon
so has part: feature:2363006-2363050:-1:exon
so has part: feature:2359690-2359788:-1:exon
so has part: feature:2359489-2359596:-1:exon
so has part: feature:2358781-2358834:-1:exon
so has part: feature:2357509-2357562:-1:exon
so has part: feature:2357060-2357113:-1:exon
so has part: feature:2354294-2354347:-1:exon
so has part: feature:2352398-2352505:-1:exon
so has part: feature:2352255-2352308:-1:exon
so has part: feature:2350174-2350227:-1:exon
so has part: feature:2349316-2349477:-1:exon
so has part: feature:2348737-2348844:-1:exon
so has part: feature:2342869-2342976:-1:exon
so has part: feature:2342730-2342783:-1:exon
so has part: feature:2340449-2340556:-1:exon
so has part: feature:2340192-2340245:-1:exon
so has part: feature:2339494-2339601:-1:exon
so has part: feature:2338384-2338437:-1:exon
so has part: feature:2336731-2336838:-1:exon
so has part: feature:2336169-2336457:-1:exon
so has part: feature:2335573-2335754:-1:exon
so has part: feature:2334484-2334726:-1:exon
so has part: feature:2333832-2333978:-1:exon

XP_032871638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2407781-2407874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2404422-2404631:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2403012-2403028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2399269-2399301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2398658-2398690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2398494-2398547:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2398172-2398273:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2395055-2395132:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2388685-2388729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2388477-2388530:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2387661-2387714:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2387504-2387557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2386530-2386583:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2385897-2385950:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2383023-2383067:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2382762-2382815:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2381915-2381959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2380448-2380501:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2376154-2376252:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2375501-2375545:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2374430-2374528:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2372852-2372905:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2372275-2372382:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2370985-2371038:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2369761-2369859:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2369440-2369493:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2367407-2367505:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2367184-2367237:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2365701-2365754:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2364147-2364200:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2363292-2363345:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2363006-2363050:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2359690-2359788:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2359489-2359596:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2358781-2358834:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2357509-2357562:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2357060-2357113:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2354294-2354347:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2352398-2352505:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2352255-2352308:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2350174-2350227:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2349316-2349477:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2348737-2348844:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2342869-2342976:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2342730-2342783:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2340449-2340556:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2340192-2340245:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2339494-2339601:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2338384-2338437:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2336731-2336838:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2336169-2336457:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2335573-2335754:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2334484-2334726:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:2333832-2333978:-1:exon

LOC116968826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(II) chain isoform X4
translation: MFRFVDARTFVLLAATQAILLTVVKCQHSHTQGLKSTCIQDGQTYSDKDVWKPRPCSICVCDTGIILCDDIICEDIKDCPNPEIPFGECCPVCLNQRPPPIDRQRGPRGQKGEPGDIKDVVGPNGPPGPQGPSGEQGVRGLRGEKGELGVAGPRGRDGEPGTPGNPGPPGLPGTSGRSDFGGSFASQMARGFDEKAGGAQMGVMQGPMGPMGPRGPPGPTGVPGPQGFQGSAGEAGESGAAGPMGPRGPPGPSGKPGDDGAAGKAGKPGDRGAPGPQGARGFPGTPGLPGVKGHRGYSGLDGAKGETGAAGAKGESGAAGENGSPGPMGPRGLPGERGRPGSPGSAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGSRGESGTPGSPGPAGAPGNPGTDGIPGSKGSAGAPGNRGFPGQDGLAGPKGAPGERGVAGVSGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGATGASGEDGRPGPPGPQGARGQPGVMGFPGPKGATGNAGKAGEKGLLGAPGLRGLPGKDGETGAQGPPGPSGIAGERGEQGPPGPPGFQGLPGPPGPPGEGGKPGDQGVPGEAGAAGPTGPRGERGFPGERGSPGSQGLQGPRGLPGTPGADGPKGAGGAPGPNGAQGPPGLQGMPGERGTAGIPGPKGDRGDSGGKGPEGAPGKDGGRGLTGPIGPPGPSGPNGLKGETGPRGPTGTAGARGSPGERGETGPPGPAGFAGPPGSDGQAGQKGEPGETGQKGDAGAPGPQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPVGPAGAPGKDGPKGLRGDPGQAGRAGDPGLQGPAGTPGEKGEPGEDGPPGPDGPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPSGLTGPSGEPGREGNPGADGPPGRDGSNGPKGERGQTGVAGAPGASGAPGAPGPVGPTGKQGNRGESGAQGPMGPSGPSGARGMPGPQGPRGDKGEAGEAGERGQKGHRGFTGLQGLPGPPGPGGDQGAVGAAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGESGPSGPPGNSGPPGPPGPPGPGIDMSAFAGLSQPEKAPDPLRYFRADQAAPLLRQHDAEVDATLKSLNNQMENIRSPEGSKKNPARTCRDLKLCHSDWKSGDYWVDPNQGCTLDAIKVFCNMETGETCVYPNPASIPRKNWWTSKGKKHVWFGETMNGGFHFSYGDGSLTANTAAIQMTFLRLLSTEASQNITYHCKNSIAYMDRATGNLKKALLLQGSNDIEIRAEGNSRFTYTVLEDGCTKHTGKWGKTVIEYRSQKTTRLPIVDVAPLDIGGSDQEFGVDIGAVCFL
SIO_010081: LOC116968826
subclass of: SO_0000673
so part of: LOC116968826
location: complement(join(2333832..2333978,2334484..2334726,2335573..2335754,2336169..2336457,2336731..2336838,2338384..2338437,2339494..2339601,2340192..2340245,2340449..2340556,2342730..2342783,2342869..2342976,2348737..2348844,2349316..2349477,2350174..2350227,2352255..2352308,2352398..2352505,2354294..2354347,2357060..2357113,2357509..2357562,2358781..2358834,2359489..2359596,2359690..2359788,2363006..2363050,2363292..2363345,2364147..2364200,2365701..2365754,2367184..2367237,2367407..2367505,2369440..2369493,2369761..2369859,2370985..2371038,2375501..2375545,2376154..2376252,2380448..2380501,2381915..2381959,2382762..2382815,2383023..2383067,2385897..2385950,2386530..2386583,2387504..2387557,2387661..2387714,2388477..2388530,2388685..2388729,2395055..2395132,2398172..2398273,2398494..2398547,2398658..2398690,2399269..2399301,2403012..2403028,2404422..2404634,2407781..2407874))
location: region:2333832-2407874:-1
so has part: feature:2407781-2407874:-1:exon
so has part: feature:2404422-2404634:-1:exon
so has part: feature:2403012-2403028:-1:exon
so has part: feature:2399269-2399301:-1:exon
so has part: feature:2398658-2398690:-1:exon
so has part: feature:2398494-2398547:-1:exon
so has part: feature:2398172-2398273:-1:exon
so has part: feature:2395055-2395132:-1:exon
so has part: feature:2388685-2388729:-1:exon
so has part: feature:2388477-2388530:-1:exon
so has part: feature:2387661-2387714:-1:exon
so has part: feature:2387504-2387557:-1:exon
so has part: feature:2386530-2386583:-1:exon
so has part: feature:2385897-2385950:-1:exon
so has part: feature:2383023-2383067:-1:exon
so has part: feature:2382762-2382815:-1:exon
so has part: feature:2381915-2381959:-1:exon
so has part: feature:2380448-2380501:-1:exon
so has part: feature:2376154-2376252:-1:exon
so has part: feature:2375501-2375545:-1:exon
so has part: feature:2370985-2371038:-1:exon
so has part: feature:2369761-2369859:-1:exon
so has part: feature:2369440-2369493:-1:exon
so has part: feature:2367407-2367505:-1:exon
so has part: feature:2367184-2367237:-1:exon
so has part: feature:2365701-2365754:-1:exon
so has part: feature:2364147-2364200:-1:exon
so has part: feature:2363292-2363345:-1:exon
so has part: feature:2363006-2363050:-1:exon
so has part: feature:2359690-2359788:-1:exon
so has part: feature:2359489-2359596:-1:exon
so has part: feature:2358781-2358834:-1:exon
so has part: feature:2357509-2357562:-1:exon
so has part: feature:2357060-2357113:-1:exon
so has part: feature:2354294-2354347:-1:exon
so has part: feature:2352398-2352505:-1:exon
so has part: feature:2352255-2352308:-1:exon
so has part: feature:2350174-2350227:-1:exon
so has part: feature:2349316-2349477:-1:exon
so has part: feature:2348737-2348844:-1:exon
so has part: feature:2342869-2342976:-1:exon
so has part: feature:2342730-2342783:-1:exon
so has part: feature:2340449-2340556:-1:exon
so has part: feature:2340192-2340245:-1:exon
so has part: feature:2339494-2339601:-1:exon
so has part: feature:2338384-2338437:-1:exon
so has part: feature:2336731-2336838:-1:exon
so has part: feature:2336169-2336457:-1:exon
so has part: feature:2335573-2335754:-1:exon
so has part: feature:2334484-2334726:-1:exon
so has part: feature:2333832-2333978:-1:exon

XP_032871640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2407781-2407874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2404422-2404634:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2403012-2403028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2399269-2399301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2398658-2398690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2398494-2398547:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2398172-2398273:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2395055-2395132:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2388685-2388729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2388477-2388530:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2387661-2387714:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2387504-2387557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2386530-2386583:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2385897-2385950:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2383023-2383067:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2382762-2382815:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2381915-2381959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2380448-2380501:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2376154-2376252:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2375501-2375545:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2370985-2371038:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2369761-2369859:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2369440-2369493:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2367407-2367505:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2367184-2367237:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2365701-2365754:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2364147-2364200:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2363292-2363345:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2363006-2363050:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2359690-2359788:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2359489-2359596:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2358781-2358834:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2357509-2357562:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2357060-2357113:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2354294-2354347:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2352398-2352505:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2352255-2352308:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2350174-2350227:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2349316-2349477:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2348737-2348844:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2342869-2342976:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2342730-2342783:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2340449-2340556:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2340192-2340245:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2339494-2339601:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2338384-2338437:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2336731-2336838:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2336169-2336457:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2335573-2335754:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2334484-2334726:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2333832-2333978:-1:exon

LOC116968826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(II) chain isoform X1
translation: MFRFVDARTFVLLAATQAILLTVVKCQHSHTQGLKSTCIQDGQTYSDKDVWKPRPCSICVCDTGIILCDDIICEDIKDCPNPEIPFGECCPVCLNQRPPPIDRQRGPRGQKGEPGDIKDVVGPNGPPGPQGPSGEQGVRGLRGEKGELGVAGPRGRDGEPGTPGNPGPPGLPGTSGRSDFGGSFASQMARGFDEKAGGAQMGVMQGPMGPMGPRGPPGPTGVPGPQGFQGSAGEAGESGAAGPMGPRGPPGPSGKPGDDGAAGKAGKPGDRGAPGPQGARGFPGTPGLPGVKGHRGYSGLDGAKGETGAAGAKGESGAAGENGSPGPMGPRGLPGERGRPGSPGSAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGSRGESGTPGSPGPAGAPGNPGTDGIPGSKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTQGDPGATGFKGETGPKGEIGPVGPQGAPGPAGEEGKRGPRGEPGAAGPNGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVAGVSGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGATGASGEDGRPGPPGPQGARGQPGVMGFPGPKGATGNAGKAGEKGLLGAPGLRGLPGKDGETGAQGPPGPSGIAGERGEQGPPGPPGFQGLPGPPGPPGEGGKPGDQGVPGEAGAAGPTGPRGERGFPGERGSPGSQGLQGPRGLPGTPGADGPKGAGGAPGPNGAQGPPGLQGMPGERGTAGIPGPKGDRGDSGGKGPEGAPGKDGGRGLTGPIGPPGPSGPNGLKGETGPRGPTGTAGARGSPGERGETGPPGPAGFAGPPGSDGQAGQKGEPGETGQKGDAGAPGPQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPVGPAGAPGKDGPKGLRGDPGQAGRAGDPGLQGPAGTPGEKGEPGEDGPPGPDGPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPSGLTGPSGEPGREGNPGADGPPGRDGSNGPKGERGQTGVAGAPGASGAPGAPGPVGPTGKQGNRGESGAQGPMGPSGPSGARGMPGPQGPRGDKGEAGEAGERGQKGHRGFTGLQGLPGPPGPGGDQGAVGAAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGESGPSGPPGNSGPPGPPGPPGPGIDMSAFAGLSQPEKAPDPLRYFRADQAAPLLRQHDAEVDATLKSLNNQMENIRSPEGSKKNPARTCRDLKLCHSDWKSGDYWVDPNQGCTLDAIKVFCNMETGETCVYPNPASIPRKNWWTSKGKKHVWFGETMNGGFHFSYGDGSLTANTAAIQMTFLRLLSTEASQNITYHCKNSIAYMDRATGNLKKALLLQGSNDIEIRAEGNSRFTYTVLEDGCTKHTGKWGKTVIEYRSQKTTRLPIVDVAPLDIGGSDQEFGVDIGAVCFL
SIO_010081: LOC116968826
subclass of: SO_0000673
so part of: LOC116968826
location: complement(join(2333832..2333978,2334484..2334726,2335573..2335754,2336169..2336457,2336731..2336838,2338384..2338437,2339494..2339601,2340192..2340245,2340449..2340556,2342730..2342783,2342869..2342976,2348737..2348844,2349316..2349477,2350174..2350227,2352255..2352308,2352398..2352505,2354294..2354347,2357060..2357113,2357509..2357562,2358781..2358834,2359489..2359596,2359690..2359788,2363006..2363050,2363292..2363345,2364147..2364200,2365701..2365754,2367184..2367237,2367407..2367505,2369440..2369493,2369761..2369859,2370985..2371038,2372275..2372382,2372852..2372905,2374430..2374528,2375501..2375545,2376154..2376252,2380448..2380501,2381915..2381959,2382762..2382815,2383023..2383067,2385897..2385950,2386530..2386583,2387504..2387557,2387661..2387714,2388477..2388530,2388685..2388729,2395055..2395132,2398172..2398273,2398494..2398547,2398658..2398690,2399269..2399301,2403012..2403028,2404422..2404634,2407781..2407874))
location: region:2333832-2407874:-1
so has part: feature:2407781-2407874:-1:exon
so has part: feature:2404422-2404634:-1:exon
so has part: feature:2403012-2403028:-1:exon
so has part: feature:2399269-2399301:-1:exon
so has part: feature:2398658-2398690:-1:exon
so has part: feature:2398494-2398547:-1:exon
so has part: feature:2398172-2398273:-1:exon
so has part: feature:2395055-2395132:-1:exon
so has part: feature:2388685-2388729:-1:exon
so has part: feature:2388477-2388530:-1:exon
so has part: feature:2387661-2387714:-1:exon
so has part: feature:2387504-2387557:-1:exon
so has part: feature:2386530-2386583:-1:exon
so has part: feature:2385897-2385950:-1:exon
so has part: feature:2383023-2383067:-1:exon
so has part: feature:2382762-2382815:-1:exon
so has part: feature:2381915-2381959:-1:exon
so has part: feature:2380448-2380501:-1:exon
so has part: feature:2376154-2376252:-1:exon
so has part: feature:2375501-2375545:-1:exon
so has part: feature:2374430-2374528:-1:exon
so has part: feature:2372852-2372905:-1:exon
so has part: feature:2372275-2372382:-1:exon
so has part: feature:2370985-2371038:-1:exon
so has part: feature:2369761-2369859:-1:exon
so has part: feature:2369440-2369493:-1:exon
so has part: feature:2367407-2367505:-1:exon
so has part: feature:2367184-2367237:-1:exon
so has part: feature:2365701-2365754:-1:exon
so has part: feature:2364147-2364200:-1:exon
so has part: feature:2363292-2363345:-1:exon
so has part: feature:2363006-2363050:-1:exon
so has part: feature:2359690-2359788:-1:exon
so has part: feature:2359489-2359596:-1:exon
so has part: feature:2358781-2358834:-1:exon
so has part: feature:2357509-2357562:-1:exon
so has part: feature:2357060-2357113:-1:exon
so has part: feature:2354294-2354347:-1:exon
so has part: feature:2352398-2352505:-1:exon
so has part: feature:2352255-2352308:-1:exon
so has part: feature:2350174-2350227:-1:exon
so has part: feature:2349316-2349477:-1:exon
so has part: feature:2348737-2348844:-1:exon
so has part: feature:2342869-2342976:-1:exon
so has part: feature:2342730-2342783:-1:exon
so has part: feature:2340449-2340556:-1:exon
so has part: feature:2340192-2340245:-1:exon
so has part: feature:2339494-2339601:-1:exon
so has part: feature:2338384-2338437:-1:exon
so has part: feature:2336731-2336838:-1:exon
so has part: feature:2336169-2336457:-1:exon
so has part: feature:2335573-2335754:-1:exon
so has part: feature:2334484-2334726:-1:exon
so has part: feature:2333832-2333978:-1:exon

XP_032871636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2407781-2407874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2404422-2404634:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2403012-2403028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2399269-2399301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2398658-2398690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2398494-2398547:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2398172-2398273:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2395055-2395132:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2388685-2388729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2388477-2388530:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2387661-2387714:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2387504-2387557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2386530-2386583:-1:exon

urn:…
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urn:…
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SIO_000628: feature:2333832-2333978:-1:exon

LOC116968826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968826
product: collagen alpha-1(II) chain, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015750.1
SIO_010081: LOC116968826
subclass of: SO_0000673
so part of: LOC116968826
location: complement(join(2339689..2340014,2340113..2340245,2340449..2340556,2342730..2342783,2342869..2342976,2348737..2348844,2349316..2349477,2350174..2350227,2352255..2352308,2352398..2352505,2354294..2354347,2357060..2357113,2357509..2357562,2358781..2358834,2359489..2359596,2359690..2359788,2363006..2363050,2363292..2363345,2364147..2364200,2365701..2365754,2367184..2367237,2367407..2367505,2369440..2369493,2369761..2369859,2370985..2371038,2372275..2372382,2372852..2372905,2374430..2374528,2375501..2375545,2376154..2376252,2380448..2380501,2381915..2381959,2382762..2382815,2383023..2383067,2385897..2385950,2386530..2386583,2387504..2387557,2387661..2387714,2388477..2388530,2388685..2388729,2395055..2395132,2398172..2398273,2398494..2398547,2398658..2398690,2399269..2399301,2403012..2403028,2404422..2404634,2407781..2408057))
location: region:2339689-2408057:-1
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position:2339689:-1
position: 2339689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
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position:2340113:-1
position: 2340113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:2339689-2340014:-1:exon

position:2340014:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(II) chain isoform X5
translation: MFRFVDARTFVLLAATQAILLTVVKCQHSHTQGLKSTCIQDGQTYSDKDVWKPRPCSICVCDTGIILCDDIICEDIKDCPNPEIPFGECCPVCLNQRPPPIDRQRGPRGQKGEPGDIKDVVGPNGPPGPQGPSGEQGVRGLRGEKGELGVAGPRGRDGEPGTPGNPGPPGLPGTSGRSDFGGSFASQMARGFDEKAGGAQMGVMQGPMGPMGPRGPPGPTGVPGPQGFQGSAGEAGESGAAGPMGPRGPPGPSGKPGDDGAAGKAGKPGDRGAPGPQGARGFPGTPGLPGVKGHRGYSGLDGAKGETGAAGAKGESGAAGENGSPGPMGPRGLPGERGRPGSPGSAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGSRGESGTPGSPGPAGAPGNPGTDGIPGSKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTQGDPGATGFKGETGPKGEIGPVGPQGAPGPAGEEGKRGPRGEPGAAGPNGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVAGVSGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGATGASGEDGRPGPPGPQGARGQPGVMGFPGPKGATGNAGKAGEKGLLGAPGLRGLPGKDGETGAQGPPGPSGIAGERGEQGPPGPPGFQGLPGPPGPPGEGGKPGDQGVPGEAGAAGPTGPRGERGFPGERGSPGSQGLQGPRGLPGTPGADGPKGAGGAPGPNGAQGPPGLQGMPGERGTAGIPGPKGDRGDSGGKGPEGAPGKDGGRGLTGPIGPPGPSGPNGLKGETGPRGPTGTAGARGSPGERGETGPPGPAGFAGPPGSDGQAGQKGEPGETGQKGDAGAPGPQGPSGAPGPQGPTGVNGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPVGPAGAPGKDGPKGLRGDPGQAGRAGDPGLQGPAGTPGEKGEPGEDGPPGPDGPSGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPSGLTGPSGEPGREGNPGADGPPGRDGSNGPKGERGQTGVAGAPGASGAPGAPGPVGPTGKQGNRGESGAQGPMGPSGPSGARGMPVSNLCHLLCCI
SIO_010081: LOC116968826
subclass of: SO_0000673
so part of: LOC116968826
location: complement(join(2340156..2340245,2340449..2340556,2342730..2342783,2342869..2342976,2348737..2348844,2349316..2349477,2350174..2350227,2352255..2352308,2352398..2352505,2354294..2354347,2357060..2357113,2357509..2357562,2358781..2358834,2359489..2359596,2359690..2359788,2363006..2363050,2363292..2363345,2364147..2364200,2365701..2365754,2367184..2367237,2367407..2367505,2369440..2369493,2369761..2369859,2370985..2371038,2372275..2372382,2372852..2372905,2374430..2374528,2375501..2375545,2376154..2376252,2380448..2380501,2381915..2381959,2382762..2382815,2383023..2383067,2385897..2385950,2386530..2386583,2387504..2387557,2387661..2387714,2388477..2388530,2388685..2388729,2395055..2395132,2398172..2398273,2398494..2398547,2398658..2398690,2399269..2399301,2403012..2403028,2404422..2404634,2407781..2407874))
location: region:2340156-2407874:-1
so has part: feature:2407781-2407874:-1:exon
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XP_032871641.1
type: Protein
SIO_000068: ncbiprotein

position:2340156:-1
position: 2340156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 33
SIO_000628: feature:2359690-2359788:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2359489-2359596:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2358781-2358834:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2357509-2357562:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2357060-2357113:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2354294-2354347:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2352398-2352505:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2352255-2352308:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2350174-2350227:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2349316-2349477:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2348737-2348844:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2342869-2342976:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2342730-2342783:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2340449-2340556:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2340156-2340245:-1:exon

LOC116968828
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2344735..2348720)
location: region:2344735-2348720:-1
so has part: feature:2344735-2348720:-1:exon
subclass of: SO_0000011

116968828
type: Gene
SIO_000068: ncbigene

position:2344735:-1
position: 2344735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2348720:-1
position: 2348720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2344735-2348720:-1:exon

LOC116968828
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968828
product: uncharacterized LOC116968828
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004410537.1
SIO_010081: LOC116968828
subclass of: SO_0000673
so part of: LOC116968828
location: complement(join(2344735..2346014,2346373..2348720))
location: region:2344735-2348720:-1
so has part: feature:2346373-2348720:-1:exon
so has part: feature:2344735-2346014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2346373-2348720:-1:exon

position:2346373:-1
position: 2346373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2344735-2346014:-1:exon

position:2346014:-1
position: 2346014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116968725
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2588610..2622748
location: region:2588610-2622748:1
so has part: feature:2588610-2622748:1:exon
subclass of: SO_0000010

116968725
type: Gene
SIO_000068: ncbigene

position:2588610:1
position: 2588610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2622748:1
position: 2622748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2588610-2622748:1:exon

LOC116968725
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116968725
product: diacylglycerol kinase beta-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033015514.1
SIO_010081: LOC116968725
subclass of: SO_0000673
so part of: LOC116968725
location: join(2588610..2588683,2590458..2590577,2591732..2591849,2593351..2593439,2596023..2596139,2597601..2597699,2598893..2598985,2600956..2601029,2602387..2602461,2608490..2608575,2612661..2612750,2614958..2615115,2616875..2616939,2618562..2618652,2619941..2620124,2620822..2620942,2621052..2621112,2621956..2622748)
location: region:2588610-2622748:1
so has part: feature:2588610-2588683:1:exon
so has part: feature:2590458-2590577:1:exon
so has part: feature:2591732-2591849:1:exon
so has part: feature:2593351-2593439:1:exon
so has part: feature:2596023-2596139:1:exon
so has part: feature:2597601-2597699:1:exon
so has part: feature:2598893-2598985:1:exon
so has part: feature:2600956-2601029:1:exon
so has part: feature:2602387-2602461:1:exon
so has part: feature:2608490-2608575:1:exon
so has part: feature:2612661-2612750:1:exon
so has part: feature:2614958-2615115:1:exon
so has part: feature:2616875-2616939:1:exon
so has part: feature:2618562-2618652:1:exon
so has part: feature:2619941-2620124:1:exon
so has part: feature:2620822-2620942:1:exon
so has part: feature:2621052-2621112:1:exon
so has part: feature:2621956-2622748:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2588610-2588683:1:exon

position:2588683:1
position: 2588683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2590458-2590577:1:exon

position:2590458:1
position: 2590458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2590577:1
position: 2590577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2591732-2591849:1:exon

position:2591732:1
position: 2591732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2591849:1
position: 2591849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2593351-2593439:1:exon

position:2593351:1
position: 2593351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2593439:1
position: 2593439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2596023-2596139:1:exon

position:2596023:1
position: 2596023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2596139:1
position: 2596139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2597601-2597699:1:exon

position:2597601:1
position: 2597601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2597699:1
position: 2597699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2598893-2598985:1:exon

position:2598893:1
position: 2598893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2598985:1
position: 2598985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2600956-2601029:1:exon

position:2600956:1
position: 2600956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2601029:1
position: 2601029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2602387-2602461:1:exon

position:2602387:1
position: 2602387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2602461:1
position: 2602461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2608490-2608575:1:exon

position:2608490:1
position: 2608490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2608575:1
position: 2608575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2612661-2612750:1:exon

position:2612661:1
position: 2612661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2612750:1
position: 2612750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2614958-2615115:1:exon

position:2614958:1
position: 2614958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2615115:1
position: 2615115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2616875-2616939:1:exon

position:2616875:1
position: 2616875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2616939:1
position: 2616939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2618562-2618652:1:exon

position:2618562:1
position: 2618562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2618652:1
position: 2618652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2619941-2620124:1:exon

position:2619941:1
position: 2619941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2620124:1
position: 2620124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2620822-2620942:1:exon

position:2620822:1
position: 2620822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2620942:1
position: 2620942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2621052-2621112:1:exon

position:2621052:1
position: 2621052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2621112:1
position: 2621112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2621956-2622748:1:exon

position:2621956:1
position: 2621956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116968725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116968725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: diacylglycerol kinase beta-like
translation: MMHVAKYLDWDVTELKPILRDMMNEIDYDRNGTVSLDEWIKGGMTTAPLLVLLGLEASLKDDGQHIWRLKHFSRPVFCNMCQNILLGIRKQGLCCTFCKYTVHERCASKAPSSCIQTYSKSIKDTNVMKHMWVEGNCNITCGSCQKTIKSFQRLTGVHCAWCHDTLHNECMPPETEECDCGQFKDHVLPPSAIYPVVLDRQNSLKKKDDDTSSLDGEMPITTVDGKILQIIPVPDTHPLLVFVNPKSGGKQGERVLRKFQYLLNPRQVFNLAKDGPKPGLKFFQDVPNIRVLVCGGDGTVGWILDSTDKMHFPVKPPVAILPLGTGNDLARCLRWGGGYDGEKLTKILKDIEVGIPTLLDRWSFKVIESGQEKGDPVPYNIINNYFSIGVDASIAHRFHVMREKYPEKFNSRMKNKLWYFEFATSETVSATCKNLQEVLEIECSGTLIDLSNLSLEGIAILNIPSMHGGSNLWGENKRGESKHLPNKDNAAITDPEALKSCVQDLSDRLLEVVGLEGVIEMGQIYAGLKSAGRRLAQCSEVTIRTKRLLPMQIDGEPWVQPPCTIKITHKNQVPMLMGPFSKSSGSKK
SIO_010081: LOC116968725
subclass of: SO_0000673
so part of: LOC116968725
location: join(2588633..2588683,2590458..2590577,2591732..2591849,2593351..2593439,2596023..2596139,2597601..2597699,2598893..2598985,2600956..2601029,2602387..2602461,2608490..2608575,2612661..2612750,2614958..2615115,2616875..2616939,2618562..2618652,2619941..2620124,2620822..2620942,2621052..2621112,2621956..2622030)
location: region:2588633-2622030:1
so has part: feature:2588633-2588683:1:exon
so has part: feature:2590458-2590577:1:exon
so has part: feature:2591732-2591849:1:exon
so has part: feature:2593351-2593439:1:exon
so has part: feature:2596023-2596139:1:exon
so has part: feature:2597601-2597699:1:exon
so has part: feature:2598893-2598985:1:exon
so has part: feature:2600956-2601029:1:exon
so has part: feature:2602387-2602461:1:exon
so has part: feature:2608490-2608575:1:exon
so has part: feature:2612661-2612750:1:exon
so has part: feature:2614958-2615115:1:exon
so has part: feature:2616875-2616939:1:exon
so has part: feature:2618562-2618652:1:exon
so has part: feature:2619941-2620124:1:exon
so has part: feature:2620822-2620942:1:exon
so has part: feature:2621052-2621112:1:exon
so has part: feature:2621956-2622030:1:exon

XP_032871405.1
type: Protein
SIO_000068: ncbiprotein

position:2588633:1
position: 2588633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2622030:1
position: 2622030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2588633-2588683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2590458-2590577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2591732-2591849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2593351-2593439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2596023-2596139:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2597601-2597699:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2598893-2598985:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2600956-2601029:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2602387-2602461:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2608490-2608575:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2612661-2612750:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2614958-2615115:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2616875-2616939:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2618562-2618652:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2619941-2620124:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2620822-2620942:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2621052-2621112:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2621956-2622030:1:exon

stac3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: stac3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2633219..2665082)
location: region:2633219-2665082:-1
so has part: feature:2633219-2665082:-1:exon
subclass of: SO_0000010

116968738
type: Gene
SIO_000068: ncbigene

position:2633219:-1
position: 2633219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2665082:-1
position: 2665082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2633219-2665082:-1:exon

stac3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: stac3
product: SH3 and cysteine rich domain 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033015542.1
SIO_010081: stac3
subclass of: SO_0000673
so part of: stac3
location: complement(join(2633219..2634886,2636059..2636196,2637364..2637415,2639514..2639617,2641922..2641971,2643041..2643104,2644878..2644975,2645446..2645527,2647162..2647259,2648848..2649115,2659211..2659277,2664891..2665082))
location: region:2633219-2665082:-1
so has part: feature:2664891-2665082:-1:exon
so has part: feature:2659211-2659277:-1:exon
so has part: feature:2648848-2649115:-1:exon
so has part: feature:2647162-2647259:-1:exon
so has part: feature:2645446-2645527:-1:exon
so has part: feature:2644878-2644975:-1:exon
so has part: feature:2643041-2643104:-1:exon
so has part: feature:2641922-2641971:-1:exon
so has part: feature:2639514-2639617:-1:exon
so has part: feature:2637364-2637415:-1:exon
so has part: feature:2636059-2636196:-1:exon
so has part: feature:2633219-2634886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2664891-2665082:-1:exon

position:2664891:-1
position: 2664891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2659211-2659277:-1:exon

position:2659211:-1
position: 2659211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2659277:-1
position: 2659277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2648848-2649115:-1:exon

position:2648848:-1
position: 2648848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2649115:-1
position: 2649115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2647162-2647259:-1:exon

position:2647162:-1
position: 2647162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2647259:-1
position: 2647259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2645446-2645527:-1:exon

position:2645446:-1
position: 2645446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2645527:-1
position: 2645527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2644878-2644975:-1:exon

position:2644878:-1
position: 2644878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2644975:-1
position: 2644975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2643041-2643104:-1:exon

position:2643041:-1
position: 2643041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2643104:-1
position: 2643104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2641922-2641971:-1:exon

position:2641922:-1
position: 2641922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2641971:-1
position: 2641971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2639514-2639617:-1:exon

position:2639514:-1
position: 2639514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2639617:-1
position: 2639617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2637364-2637415:-1:exon

position:2637364:-1
position: 2637364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2637415:-1
position: 2637415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2636059-2636196:-1:exon

position:2636059:-1
position: 2636059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2636196:-1
position: 2636196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2633219-2634886:-1:exon

position:2634886:-1
position: 2634886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

stac3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: stac3
product: SH3 and cysteine rich domain 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033015543.1
SIO_010081: stac3
subclass of: SO_0000673
so part of: stac3
location: complement(join(2633219..2634886,2636059..2636196,2637364..2637415,2639514..2639617,2641922..2641971,2643041..2643104,2644878..2644975,2645446..2645527,2647162..2647259,2648848..2649115,2659211..2659277,2660887..2660904))
location: region:2633219-2660904:-1
so has part: feature:2660887-2660904:-1:exon
so has part: feature:2659211-2659277:-1:exon
so has part: feature:2648848-2649115:-1:exon
so has part: feature:2647162-2647259:-1:exon
so has part: feature:2645446-2645527:-1:exon
so has part: feature:2644878-2644975:-1:exon
so has part: feature:2643041-2643104:-1:exon
so has part: feature:2641922-2641971:-1:exon
so has part: feature:2639514-2639617:-1:exon
so has part: feature:2637364-2637415:-1:exon
so has part: feature:2636059-2636196:-1:exon
so has part: feature:2633219-2634886:-1:exon

position:2660904:-1
position: 2660904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2660887-2660904:-1:exon

position:2660887:-1
position: 2660887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2659211-2659277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2648848-2649115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2647162-2647259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2645446-2645527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2644878-2644975:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2643041-2643104:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2641922-2641971:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2639514-2639617:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2637364-2637415:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2636059-2636196:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2633219-2634886:-1:exon

stac3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: stac3
product: SH3 and cysteine rich domain 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033015544.1
SIO_010081: stac3
subclass of: SO_0000673
so part of: stac3
location: complement(join(2633219..2634886,2636059..2636196,2637364..2637415,2639514..2639617,2641922..2641971,2643041..2643104,2644878..2644975,2645446..2645527,2647162..2647259,2648848..2649115,2653926..2654075))
location: region:2633219-2654075:-1
so has part: feature:2653926-2654075:-1:exon
so has part: feature:2648848-2649115:-1:exon
so has part: feature:2647162-2647259:-1:exon
so has part: feature:2645446-2645527:-1:exon
so has part: feature:2644878-2644975:-1:exon
so has part: feature:2643041-2643104:-1:exon
so has part: feature:2641922-2641971:-1:exon
so has part: feature:2639514-2639617:-1:exon
so has part: feature:2637364-2637415:-1:exon
so has part: feature:2636059-2636196:-1:exon
so has part: feature:2633219-2634886:-1:exon

position:2654075:-1
position: 2654075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653926-2654075:-1:exon

position:2653926:-1
position: 2653926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2648848-2649115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2647162-2647259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2645446-2645527:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2644878-2644975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2643041-2643104:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2641922-2641971:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2639514-2639617:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2637364-2637415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2636059-2636196:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2633219-2634886:-1:exon

stac3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: stac3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 and cysteine-rich domain-containing protein 3 isoform X1
translation: MTEKEALNDSNSPQHDEKPGSPVQKLKSIFQKKQKETSKEEILPQQLNGEIVNTGGGVVYYYYDDDDDEEEVKEELPPPEPPRPVNDKPHKFKDHYFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHHHCQSYVEFQRCFGKIPPGFRRAYSSPLYSNQQFACIKELLPFSVANRSDPVYETLRTGVVMANRERKKNSEDKKNPAQMVDEELDIPKPGEELGSGVGEAADKKDKNNPDEAKNKKPQPGMRGGFSQTHYFVALYRYKAQEKDDLDFHAGDRVTVFDDSNEEWWKGKIGEKSGYFPANYIIRVRAGERVHKVIRSFVGNKEMGQITLKKDQIVVQKGEEVNGYIKVFTGRKVGMFPVDFLEEI
SIO_010081: stac3
subclass of: SO_0000673
so part of: stac3
location: complement(join(2634788..2634886,2636059..2636196,2637364..2637415,2639514..2639617,2641922..2641971,2643041..2643104,2644878..2644975,2645446..2645527,2647162..2647259,2648848..2649115,2659211..2659276))
location: region:2634788-2659276:-1
so has part: feature:2659211-2659276:-1:exon
so has part: feature:2648848-2649115:-1:exon
so has part: feature:2647162-2647259:-1:exon
so has part: feature:2645446-2645527:-1:exon
so has part: feature:2644878-2644975:-1:exon
so has part: feature:2643041-2643104:-1:exon
so has part: feature:2641922-2641971:-1:exon
so has part: feature:2639514-2639617:-1:exon
so has part: feature:2637364-2637415:-1:exon
so has part: feature:2636059-2636196:-1:exon
so has part: feature:2634788-2634886:-1:exon

XP_032871433.1
type: Protein
SIO_000068: ncbiprotein

position:2634788:-1
position: 2634788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2659276:-1
position: 2659276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2659211-2659276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2648848-2649115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2647162-2647259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2645446-2645527:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2644878-2644975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2643041-2643104:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2641922-2641971:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2639514-2639617:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2637364-2637415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2636059-2636196:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2634788-2634886:-1:exon

stac3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: stac3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 and cysteine-rich domain-containing protein 3 isoform X1
translation: MTEKEALNDSNSPQHDEKPGSPVQKLKSIFQKKQKETSKEEILPQQLNGEIVNTGGGVVYYYYDDDDDEEEVKEELPPPEPPRPVNDKPHKFKDHYFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHHHCQSYVEFQRCFGKIPPGFRRAYSSPLYSNQQFACIKELLPFSVANRSDPVYETLRTGVVMANRERKKNSEDKKNPAQMVDEELDIPKPGEELGSGVGEAADKKDKNNPDEAKNKKPQPGMRGGFSQTHYFVALYRYKAQEKDDLDFHAGDRVTVFDDSNEEWWKGKIGEKSGYFPANYIIRVRAGERVHKVIRSFVGNKEMGQITLKKDQIVVQKGEEVNGYIKVFTGRKVGMFPVDFLEEI
SIO_010081: stac3
subclass of: SO_0000673
so part of: stac3
location: complement(join(2634788..2634886,2636059..2636196,2637364..2637415,2639514..2639617,2641922..2641971,2643041..2643104,2644878..2644975,2645446..2645527,2647162..2647259,2648848..2649115,2659211..2659276))
location: region:2634788-2659276:-1
so has part: feature:2659211-2659276:-1:exon
so has part: feature:2648848-2649115:-1:exon
so has part: feature:2647162-2647259:-1:exon
so has part: feature:2645446-2645527:-1:exon
so has part: feature:2644878-2644975:-1:exon
so has part: feature:2643041-2643104:-1:exon
so has part: feature:2641922-2641971:-1:exon
so has part: feature:2639514-2639617:-1:exon
so has part: feature:2637364-2637415:-1:exon
so has part: feature:2636059-2636196:-1:exon
so has part: feature:2634788-2634886:-1:exon

XP_032871434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2659211-2659276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2648848-2649115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2647162-2647259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2645446-2645527:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2644878-2644975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2643041-2643104:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2641922-2641971:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2639514-2639617:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2637364-2637415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2636059-2636196:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2634788-2634886:-1:exon

stac3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: stac3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 and cysteine-rich domain-containing protein 3 isoform X2
translation: MKSVFQVQKLKSIFQKKQKETSKEEILPQQLNGEIVNTGGGVVYYYYDDDDDEEEVKEELPPPEPPRPVNDKPHKFKDHYFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHHHCQSYVEFQRCFGKIPPGFRRAYSSPLYSNQQFACIKELLPFSVANRSDPVYETLRTGVVMANRERKKNSEDKKNPAQMVDEELDIPKPGEELGSGVGEAADKKDKNNPDEAKNKKPQPGMRGGFSQTHYFVALYRYKAQEKDDLDFHAGDRVTVFDDSNEEWWKGKIGEKSGYFPANYIIRVRAGERVHKVIRSFVGNKEMGQITLKKDQIVVQKGEEVNGYIKVFTGRKVGMFPVDFLEEI
SIO_010081: stac3
subclass of: SO_0000673
so part of: stac3
location: complement(join(2634788..2634886,2636059..2636196,2637364..2637415,2639514..2639617,2641922..2641971,2643041..2643104,2644878..2644975,2645446..2645527,2647162..2647259,2648848..2649115,2653926..2653943))
location: region:2634788-2653943:-1
so has part: feature:2653926-2653943:-1:exon
so has part: feature:2648848-2649115:-1:exon
so has part: feature:2647162-2647259:-1:exon
so has part: feature:2645446-2645527:-1:exon
so has part: feature:2644878-2644975:-1:exon
so has part: feature:2643041-2643104:-1:exon
so has part: feature:2641922-2641971:-1:exon
so has part: feature:2639514-2639617:-1:exon
so has part: feature:2637364-2637415:-1:exon
so has part: feature:2636059-2636196:-1:exon
so has part: feature:2634788-2634886:-1:exon

XP_032871435.1
type: Protein
SIO_000068: ncbiprotein

position:2653943:-1
position: 2653943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653926-2653943:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2648848-2649115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2647162-2647259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2645446-2645527:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2644878-2644975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2643041-2643104:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2641922-2641971:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2639514-2639617:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2637364-2637415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2636059-2636196:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2634788-2634886:-1:exon

r3hdm2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: r3hdm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2671024..2837144)
location: region:2671024-2837144:-1
so has part: feature:2671024-2837144:-1:exon
subclass of: SO_0000010

116968815
type: Gene
SIO_000068: ncbigene

position:2671024:-1
position: 2671024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2837144:-1
position: 2837144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2671024-2837144:-1:exon

r3hdm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: r3hdm2
product: R3H domain containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015715.1
SIO_010081: r3hdm2
subclass of: SO_0000673
so part of: r3hdm2
location: complement(join(2671024..2671714,2682314..2682389,2683028..2683128,2685745..2685889,2692913..2693082,2697267..2697367,2702564..2702715,2705063..2705220,2705945..2706068,2711728..2711958,2725904..2726005,2735046..2735203,2737156..2737382,2739613..2739666,2739771..2739802,2744920..2745015,2746272..2746380,2748862..2749002,2753266..2753325,2754859..2754937,2760288..2760420,2765990..2766079,2766680..2766721,2772206..2772415,2775711..2775922,2797821..2798322))
location: region:2671024-2798322:-1
so has part: feature:2797821-2798322:-1:exon
so has part: feature:2775711-2775922:-1:exon
so has part: feature:2772206-2772415:-1:exon
so has part: feature:2766680-2766721:-1:exon
so has part: feature:2765990-2766079:-1:exon
so has part: feature:2760288-2760420:-1:exon
so has part: feature:2754859-2754937:-1:exon
so has part: feature:2753266-2753325:-1:exon
so has part: feature:2748862-2749002:-1:exon
so has part: feature:2746272-2746380:-1:exon
so has part: feature:2744920-2745015:-1:exon
so has part: feature:2739771-2739802:-1:exon
so has part: feature:2739613-2739666:-1:exon
so has part: feature:2737156-2737382:-1:exon
so has part: feature:2735046-2735203:-1:exon
so has part: feature:2725904-2726005:-1:exon
so has part: feature:2711728-2711958:-1:exon
so has part: feature:2705945-2706068:-1:exon
so has part: feature:2705063-2705220:-1:exon
so has part: feature:2702564-2702715:-1:exon
so has part: feature:2697267-2697367:-1:exon
so has part: feature:2692913-2693082:-1:exon
so has part: feature:2685745-2685889:-1:exon
so has part: feature:2683028-2683128:-1:exon
so has part: feature:2682314-2682389:-1:exon
so has part: feature:2671024-2671714:-1:exon

position:2798322:-1
position: 2798322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2797821-2798322:-1:exon

position:2797821:-1
position: 2797821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2775711-2775922:-1:exon

position:2775711:-1
position: 2775711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2775922:-1
position: 2775922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2772206-2772415:-1:exon

position:2772206:-1
position: 2772206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2772415:-1
position: 2772415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2766680-2766721:-1:exon

position:2766680:-1
position: 2766680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2766721:-1
position: 2766721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2765990-2766079:-1:exon

position:2765990:-1
position: 2765990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2766079:-1
position: 2766079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2760288-2760420:-1:exon

position:2760288:-1
position: 2760288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2760420:-1
position: 2760420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2754859-2754937:-1:exon

position:2754859:-1
position: 2754859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2754937:-1
position: 2754937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2753266-2753325:-1:exon

position:2753266:-1
position: 2753266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2753325:-1
position: 2753325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2748862-2749002:-1:exon

position:2748862:-1
position: 2748862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2749002:-1
position: 2749002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2746272-2746380:-1:exon

position:2746272:-1
position: 2746272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2746380:-1
position: 2746380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2744920-2745015:-1:exon

position:2744920:-1
position: 2744920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2745015:-1
position: 2745015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2739771-2739802:-1:exon

position:2739771:-1
position: 2739771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2739802:-1
position: 2739802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2739613-2739666:-1:exon

position:2739613:-1
position: 2739613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2739666:-1
position: 2739666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2737156-2737382:-1:exon

position:2737156:-1
position: 2737156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2737382:-1
position: 2737382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2735046-2735203:-1:exon

position:2735046:-1
position: 2735046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2735203:-1
position: 2735203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2725904-2726005:-1:exon

position:2725904:-1
position: 2725904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2726005:-1
position: 2726005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2711728-2711958:-1:exon

position:2711728:-1
position: 2711728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2711958:-1
position: 2711958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2705945-2706068:-1:exon

position:2705945:-1
position: 2705945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2706068:-1
position: 2706068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2705063-2705220:-1:exon

position:2705063:-1
position: 2705063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2705220:-1
position: 2705220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2702564-2702715:-1:exon

position:2702564:-1
position: 2702564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2702715:-1
position: 2702715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
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RO_0002162: 386614
gene: r3hdm2
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note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
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r3hdm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: r3hdm2
product: R3H domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033015712.1
SIO_010081: r3hdm2
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r3hdm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: r3hdm2
product: R3H domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033015713.1
SIO_010081: r3hdm2
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r3hdm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: r3hdm2
product: R3H domain containing 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033015717.1
SIO_010081: r3hdm2
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r3hdm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: r3hdm2
product: R3H domain containing 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033015716.1
SIO_010081: r3hdm2
subclass of: SO_0000673
so part of: r3hdm2
location: complement(join(2671374..2671714,2682305..2682389,2683028..2683128,2685745..2685889,2692913..2693082,2697267..2697367,2702564..2702715,2705063..2705220,2705945..2706068,2711728..2711958,2725904..2726005,2735046..2735203,2737156..2737382,2739771..2739802,2744920..2745015,2746272..2746380,2748862..2749002,2753266..2753325,2754859..2754937,2760288..2760420,2765990..2766079,2766680..2766721,2772206..2772415,2775711..2775922,2797821..2798316))
location: region:2671374-2798316:-1
so has part: feature:2797821-2798316:-1:exon
so has part: feature:2775711-2775922:-1:exon
so has part: feature:2772206-2772415:-1:exon
so has part: feature:2766680-2766721:-1:exon
so has part: feature:2765990-2766079:-1:exon
so has part: feature:2760288-2760420:-1:exon
so has part: feature:2754859-2754937:-1:exon
so has part: feature:2753266-2753325:-1:exon
so has part: feature:2748862-2749002:-1:exon
so has part: feature:2746272-2746380:-1:exon
so has part: feature:2744920-2745015:-1:exon
so has part: feature:2739771-2739802:-1:exon
so has part: feature:2737156-2737382:-1:exon
so has part: feature:2735046-2735203:-1:exon
so has part: feature:2725904-2726005:-1:exon
so has part: feature:2711728-2711958:-1:exon
so has part: feature:2705945-2706068:-1:exon
so has part: feature:2705063-2705220:-1:exon
so has part: feature:2702564-2702715:-1:exon
so has part: feature:2697267-2697367:-1:exon
so has part: feature:2692913-2693082:-1:exon
so has part: feature:2685745-2685889:-1:exon
so has part: feature:2683028-2683128:-1:exon
so has part: feature:2682305-2682389:-1:exon
so has part: feature:2671374-2671714:-1:exon

position:2798316:-1
position: 2798316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2797821-2798316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2775711-2775922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2772206-2772415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766680-2766721:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2765990-2766079:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2760288-2760420:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2754859-2754937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2753266-2753325:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2748862-2749002:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2746272-2746380:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2744920-2745015:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2739771-2739802:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2737156-2737382:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2735046-2735203:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2725904-2726005:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2711728-2711958:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2705945-2706068:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2705063-2705220:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2702564-2702715:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2697267-2697367:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2692913-2693082:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2685745-2685889:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2683028-2683128:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2682305-2682389:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2671374-2671714:-1:exon

r3hdm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: r3hdm2
product: R3H domain containing 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033015720.1
SIO_010081: r3hdm2
subclass of: SO_0000673
so part of: r3hdm2
location: complement(join(2671374..2671714,2682305..2682389,2683028..2683128,2685745..2685889,2692913..2693082,2697267..2697367,2702564..2702715,2705063..2705220,2705945..2706068,2711728..2711958,2735046..2735203,2737156..2737382,2739771..2739802,2744920..2745015,2746272..2746380,2748862..2749002,2753266..2753325,2754859..2754937,2760288..2760420,2765990..2766079,2766680..2766721,2772206..2772415,2775711..2775922,2797821..2798313))
location: region:2671374-2798313:-1
so has part: feature:2797821-2798313:-1:exon
so has part: feature:2775711-2775922:-1:exon
so has part: feature:2772206-2772415:-1:exon
so has part: feature:2766680-2766721:-1:exon
so has part: feature:2765990-2766079:-1:exon
so has part: feature:2760288-2760420:-1:exon
so has part: feature:2754859-2754937:-1:exon
so has part: feature:2753266-2753325:-1:exon
so has part: feature:2748862-2749002:-1:exon
so has part: feature:2746272-2746380:-1:exon
so has part: feature:2744920-2745015:-1:exon
so has part: feature:2739771-2739802:-1:exon
so has part: feature:2737156-2737382:-1:exon
so has part: feature:2735046-2735203:-1:exon
so has part: feature:2711728-2711958:-1:exon
so has part: feature:2705945-2706068:-1:exon
so has part: feature:2705063-2705220:-1:exon
so has part: feature:2702564-2702715:-1:exon
so has part: feature:2697267-2697367:-1:exon
so has part: feature:2692913-2693082:-1:exon
so has part: feature:2685745-2685889:-1:exon
so has part: feature:2683028-2683128:-1:exon
so has part: feature:2682305-2682389:-1:exon
so has part: feature:2671374-2671714:-1:exon

position:2798313:-1
position: 2798313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2797821-2798313:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2775711-2775922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2772206-2772415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2766680-2766721:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2765990-2766079:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2760288-2760420:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2754859-2754937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2753266-2753325:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2748862-2749002:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2746272-2746380:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2744920-2745015:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2739771-2739802:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2737156-2737382:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2735046-2735203:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2711728-2711958:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2705945-2706068:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2705063-2705220:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2702564-2702715:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2697267-2697367:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2692913-2693082:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2685745-2685889:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2683028-2683128:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2682305-2682389:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2671374-2671714:-1:exon

r3hdm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: r3hdm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2 isoform X5
translation: MSNSNNTQETLEIMKETEKKLVEESLIKNKPACRTSSKEELEKDGEDPNSQQEFQRRTQNHGHSRKRSKSNSKLKLVRSLAVCEESSHPFTFDGPQETQDVIQLQFTCPSDKEEERSSKDGSEKEDKEKKEKLEKVPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILEFISDDNNQYKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTINTRIPEQRFSDHIKDEKSMDFQKRFILKRDDASLDKDDNQMRVPLRDDRRSKSIEEREEEYQRVRDRIFARESSYNGYLMETRGNRECLSRASSSRQSSTENELKSSEPRPWSSTDSDSSNRSLKPPVTKASSFSGISILTRGDSIGSNKSVNRVSKTGLPLGTPELSSSGFVQASVQQPGRTVLSNSAQQQQQLPPTPQQQPMTNHLMSQPEDLGNQFGQMTLSRQGSAEAPETTSAVFQAPVMSQQPGYIIASPGQSLSAPPYSTSGHPTPQQVLQPQGYIQPPQQIPVSYYPPGQYQSSNQQYRPLSQVPYNSQRSQQLPQPAQQTGLQGVIPNQQQTYQGMMGVQQPQTPGLMNSQRNNLGNQMQGMMVQYSSVPSYQVPMSSDSQVVVQQTYQQPVMVPSQTVQGTLPGGGVPVYYSVIPPSQQNSTSQSVGFLQPPGPEQYQMPQSPSPCNPAQMQQQFTGVPAPSHGVVVMQLSVPNGPQPSQPPLLPQWNQCKYYSVEQRGQKPTELYNPDNPTQVNAQLNSPLNSPTQSPTPSPVTNVTNVCPGLAPLPLIAQFSRPVGPAQGDTRYSLLGQPLQYNLPVCPPPVIHGQCQYSAHQGPCSTKHTKRGKKPTLKSASTDLGTGDVVVGRILEVTDLPEGITRTEADKLFSQLSMSGAKIQWLKDSQQRSSGSGDCNRATENSKNAGDLAALYTIVAVFPSTMAAQNATVRLNNSTNRFKLRTAKRSYDLRILERASSQ
SIO_010081: r3hdm2
subclass of: SO_0000673
so part of: r3hdm2
location: complement(join(2671374..2671714,2682305..2682389,2683028..2683128,2685745..2685889,2692913..2693082,2697267..2697367,2702564..2702715,2705063..2705220,2705945..2706068,2711728..2711958,2735046..2735203,2737156..2737382,2739771..2739802,2744920..2745015,2746272..2746380,2748862..2749002,2753266..2753325,2754859..2754937,2760288..2760420,2765990..2766079,2766680..2766721,2772206..2772370))
location: region:2671374-2772370:-1
so has part: feature:2772206-2772370:-1:exon
so has part: feature:2766680-2766721:-1:exon
so has part: feature:2765990-2766079:-1:exon
so has part: feature:2760288-2760420:-1:exon
so has part: feature:2754859-2754937:-1:exon
so has part: feature:2753266-2753325:-1:exon
so has part: feature:2748862-2749002:-1:exon
so has part: feature:2746272-2746380:-1:exon
so has part: feature:2744920-2745015:-1:exon
so has part: feature:2739771-2739802:-1:exon
so has part: feature:2737156-2737382:-1:exon
so has part: feature:2735046-2735203:-1:exon
so has part: feature:2711728-2711958:-1:exon
so has part: feature:2705945-2706068:-1:exon
so has part: feature:2705063-2705220:-1:exon
so has part: feature:2702564-2702715:-1:exon
so has part: feature:2697267-2697367:-1:exon
so has part: feature:2692913-2693082:-1:exon
so has part: feature:2685745-2685889:-1:exon
so has part: feature:2683028-2683128:-1:exon
so has part: feature:2682305-2682389:-1:exon
so has part: feature:2671374-2671714:-1:exon

XP_032871611.1
type: Protein
SIO_000068: ncbiprotein

position:2772370:-1
position: 2772370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2772206-2772370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766680-2766721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765990-2766079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2760288-2760420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2754859-2754937:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2753266-2753325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2748862-2749002:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2746272-2746380:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2744920-2745015:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2739771-2739802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2737156-2737382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2735046-2735203:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2711728-2711958:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2705945-2706068:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2705063-2705220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2702564-2702715:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2697267-2697367:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2692913-2693082:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2685745-2685889:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2683028-2683128:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2682305-2682389:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2671374-2671714:-1:exon

r3hdm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: r3hdm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2 isoform X3
translation: MSNSNNTQETLEIMKETEKKLVEESLIKNKPACRTSSKEELEKDGEDPNSQQEFQRRTQNHGHSRKRSKSNSKLKLVRSLAVCEESSHPFTFDGPQETQDVIQLQFTCPSDKEEERSSKDGSEKEDKEKKEKLEKVPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILEFISDDNNQYKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTINTRIPEQRFSDHIKDEKSMDFQKRFILKRDDASLDKDDNQMRVPLRDDRRSKSIEEREEEYQRVRDRIFARESSYNGYLMETRGNRECLSRASSSRQSSTENELKSSEPRPWSSTDSDSSNRSLKPPVTKASSFSGISILTRGDSIGSNKSVNRVSKTGLPLGTPELSSSGFVQASVQQPGRTVLSNSAQQQQQLPPTPQQQPMTNHLMSQPLPSLQPSAQPIQYSATSCPQVLLPVSPPQQYTMPEDLGNQFGQMTLSRQGSAEAPETTSAVFQAPVMSQQPGYIIASPGQSLSAPPYSTSGHPTPQQVLQPQGYIQPPQQIPVSYYPPGQYQSSNQQYRPLSQVPYNSQRSQQLPQPAQQTGLQGVIPNQQQTYQGMMGVQQPQTPGLMNSQRNNLGNQMQGMMVQYSSVPSYQVPMSSDSQVVVQQTYQQPVMVPSQTVQGTLPGGGVPVYYSVIPPSQQNSTSQSVGFLQPPGPEQYQMPQSPSPCNPAQMQQQFTGVPAPSHGVVVMQLSVPNGPQPSQPPLLPQWNQCKYYSVEQRGQKPTELYNPDNPTQVNAQLNSPLNSPTQSPTPSPVTNVTNVCPGLAPLPLIAQFSRPVGPAQGDTRYSLLGQPLQYNLPVCPPPVIHGQCQYSAHQGPCSTKHTKRGKKPTLKSASTDLGTGDVVVGRILEVTDLPEGITRTEADKLFSQLSMSGAKIQWLKDSQQRSSGSGDCNRATENSKNAGDLAALYTIVAVFPSTMAAQNATVRLNNSTNRFKLRTAKRSYDLRILERASSQ
SIO_010081: r3hdm2
subclass of: SO_0000673
so part of: r3hdm2
location: complement(join(2671374..2671714,2682305..2682389,2683028..2683128,2685745..2685889,2692913..2693082,2697267..2697367,2702564..2702715,2705063..2705220,2705945..2706068,2711728..2711958,2725904..2726005,2735046..2735203,2737156..2737382,2739771..2739802,2744920..2745015,2746272..2746380,2748862..2749002,2753266..2753325,2754859..2754937,2760288..2760420,2765990..2766079,2766680..2766721,2772206..2772370))
location: region:2671374-2772370:-1
so has part: feature:2772206-2772370:-1:exon
so has part: feature:2766680-2766721:-1:exon
so has part: feature:2765990-2766079:-1:exon
so has part: feature:2760288-2760420:-1:exon
so has part: feature:2754859-2754937:-1:exon
so has part: feature:2753266-2753325:-1:exon
so has part: feature:2748862-2749002:-1:exon
so has part: feature:2746272-2746380:-1:exon
so has part: feature:2744920-2745015:-1:exon
so has part: feature:2739771-2739802:-1:exon
so has part: feature:2737156-2737382:-1:exon
so has part: feature:2735046-2735203:-1:exon
so has part: feature:2725904-2726005:-1:exon
so has part: feature:2711728-2711958:-1:exon
so has part: feature:2705945-2706068:-1:exon
so has part: feature:2705063-2705220:-1:exon
so has part: feature:2702564-2702715:-1:exon
so has part: feature:2697267-2697367:-1:exon
so has part: feature:2692913-2693082:-1:exon
so has part: feature:2685745-2685889:-1:exon
so has part: feature:2683028-2683128:-1:exon
so has part: feature:2682305-2682389:-1:exon
so has part: feature:2671374-2671714:-1:exon

XP_032871607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2772206-2772370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766680-2766721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765990-2766079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2760288-2760420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2754859-2754937:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2753266-2753325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2748862-2749002:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2746272-2746380:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2744920-2745015:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2739771-2739802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2737156-2737382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2735046-2735203:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2725904-2726005:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2711728-2711958:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2705945-2706068:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2705063-2705220:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2702564-2702715:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2697267-2697367:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2692913-2693082:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2685745-2685889:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2683028-2683128:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2682305-2682389:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2671374-2671714:-1:exon

r3hdm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: r3hdm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2 isoform X4
translation: MSNSNNTQETLEIMKETEKKLVEESLIKNKPACRTSSKEELEKDGEDPNSQQEFQRRTQNHGHSRKRSKSNSKLKLVRSLAVCEESSHPFTFDGPQETQDVIQLQFTCPSDKEEERSSKDGSEKEDKEKKEKLEKVPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILEFISDDNNQYKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTINTRIPEQRFSDHIKDEKSMDFQKRFILKRDDASLDKDDNQMRVPLRDDRRSKSIEEREEEYQRVRDRIFARESSYNGYLMETRLSKEGSSSILQKRRQLFRGNRECLSRASSSRQSSTENELKSSEPRPWSSTDSDSSNRSLKPPVTKASSFSGISILTRGDSIGSNKSVNRVSKTGLPLGTPELSSSGFVQASVQQPGRTVLSNSAQQQQQLPPTPQQQPMTNHLMSQPEDLGNQFGQMTLSRQGSAEAPETTSAVFQAPVMSQQPGYIIASPGQSLSAPPYSTSGHPTPQQVLQPQGYIQPPQQIPVSYYPPGQYQSSNQQYRPLSQVPYNSQRSQQLPQPAQQTGLQGVIPNQQQTYQGMMGVQQPQTPGLMNSQRNNLGNQMQGMMVQYSSVPSYQVPMSSDSQVVVQQTYQQPVMVPSQTVQGTLPGGGVPVYYSVIPPSQQNSTSQSVGFLQPPGPEQYQMPQSPSPCNPAQMQQQFTGVPAPSHGVVVMQLSVPNGPQPSQPPLLPQWNQCKYYSVEQRGQKPTELYNPDNPTQVNAQLNSPLNSPTQSPTPSPVTNVTNVCPGLAPLPLIAQFSRPVGPAQGDTRYSLLGQPLQYNLPVCPPPVIHGQCQYSAHQGPCSTKHTKRGKKPTLKSASTDLGTGDVVVGRILEVTDLPEGITRTEADKLFSQLSMSGAKIQWLKDSQQRSSGSGDCNRATENSKNAGDLAALYTIVAVFPSTMAAQNATVRLNNSTNRFKLRTAKRSYDLRILERASSQ
SIO_010081: r3hdm2
subclass of: SO_0000673
so part of: r3hdm2
location: complement(join(2671374..2671714,2682305..2682389,2683028..2683128,2685745..2685889,2692913..2693082,2697267..2697367,2702564..2702715,2705063..2705220,2705945..2706068,2711728..2711958,2735046..2735203,2737156..2737382,2739613..2739666,2739771..2739802,2744920..2745015,2746272..2746380,2748862..2749002,2753266..2753325,2754859..2754937,2760288..2760420,2765990..2766079,2766680..2766721,2772206..2772370))
location: region:2671374-2772370:-1
so has part: feature:2772206-2772370:-1:exon
so has part: feature:2766680-2766721:-1:exon
so has part: feature:2765990-2766079:-1:exon
so has part: feature:2760288-2760420:-1:exon
so has part: feature:2754859-2754937:-1:exon
so has part: feature:2753266-2753325:-1:exon
so has part: feature:2748862-2749002:-1:exon
so has part: feature:2746272-2746380:-1:exon
so has part: feature:2744920-2745015:-1:exon
so has part: feature:2739771-2739802:-1:exon
so has part: feature:2739613-2739666:-1:exon
so has part: feature:2737156-2737382:-1:exon
so has part: feature:2735046-2735203:-1:exon
so has part: feature:2711728-2711958:-1:exon
so has part: feature:2705945-2706068:-1:exon
so has part: feature:2705063-2705220:-1:exon
so has part: feature:2702564-2702715:-1:exon
so has part: feature:2697267-2697367:-1:exon
so has part: feature:2692913-2693082:-1:exon
so has part: feature:2685745-2685889:-1:exon
so has part: feature:2683028-2683128:-1:exon
so has part: feature:2682305-2682389:-1:exon
so has part: feature:2671374-2671714:-1:exon

XP_032871608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2772206-2772370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766680-2766721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765990-2766079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2760288-2760420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2754859-2754937:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2753266-2753325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2748862-2749002:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2746272-2746380:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2744920-2745015:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2739771-2739802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2739613-2739666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2737156-2737382:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2735046-2735203:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2711728-2711958:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2705945-2706068:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2705063-2705220:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2702564-2702715:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2697267-2697367:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2692913-2693082:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2685745-2685889:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2683028-2683128:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2682305-2682389:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2671374-2671714:-1:exon

r3hdm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: r3hdm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2 isoform X2
translation: MSNSNNTQETLEIMKETEKKLVEESLIKNKPACRTSSKEELEKDGEDPNSQQEFQRRTQNHGHSRKRSKSNSKLKLVRSLAVCEESSHPFTFDGPQETQDVIQLQFTCPSDKEEERSSKDGSEKEDKEKKEKLEKVPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILEFISDDNNQYKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTINTRIPEQRFSDHIKDEKSMDFQKRFILKRDDASLDKDDNQMRVPLRDDRRSKSIEEREEEYQRVRDRIFARESSYNGYLMETRLSKEGSSSILQKRRQLFRGNRECLSRASSSRQSSTENELKSSEPRPWSSTDSDSSNRSLKPPVTKASSFSGISILTRGDSIGSNKSVNRVSKTGLPLGTPELSSSGFVQASVQQPGRTVLSNSAQQQQQLPPTPQQQPMTNHLMSQPLPSLQPSAQPIQYSATSCPQVLLPVSPPQQYTMPEDLGNQFGQMTLSRQGSAEAPETTSAVFQAPVMSQQPGYIIASPGQSLSAPPYSTSGHPTPQQVLQPQGYIQPPQQIPVSYYPPGQYQSSNQQYRPLSQVPYNSQRSQQLPQPAQQTGLQGVIPNQQQTYQGMMGVQQPQTPGLMNSQRNNLGNQMQGMMVQYSSVPSYQVPMSSDSQVVVQQTYQQPVMVPSQTVQGTLPGGGVPVYYSVIPPSQQNSTSQSVGFLQPPGPEQYQMPQSPSPCNPAQMQQQFTGVPAPSHGVVVMQLSVPNGPQPSQPPLLPQWNQCKYYSVEQRGQKPTELYNPDNPTQVNAQLNSPLNSPTQSPTPSPVTNVTNVCPGLAPLPLIAQFSRPVGPAQGDTRYSLLGQPLQYNLPVCPPPVIHGQCQYSAHQGPCSTKHTKRGKKPTLKSASTDLGTVVGRILEVTDLPEGITRTEADKLFSQLSMSGAKIQWLKDSQQRSSGSGDCNRATENSKNAGDLAALYTIVAVFPSTMAAQNATVRLNNSTNRFKLRTAKRSYDLRILERASSQ
SIO_010081: r3hdm2
subclass of: SO_0000673
so part of: r3hdm2
location: complement(join(2671374..2671714,2682314..2682389,2683028..2683128,2685745..2685889,2692913..2693082,2697267..2697367,2702564..2702715,2705063..2705220,2705945..2706068,2711728..2711958,2725904..2726005,2735046..2735203,2737156..2737382,2739613..2739666,2739771..2739802,2744920..2745015,2746272..2746380,2748862..2749002,2753266..2753325,2754859..2754937,2760288..2760420,2765990..2766079,2766680..2766721,2772206..2772370))
location: region:2671374-2772370:-1
so has part: feature:2772206-2772370:-1:exon
so has part: feature:2766680-2766721:-1:exon
so has part: feature:2765990-2766079:-1:exon
so has part: feature:2760288-2760420:-1:exon
so has part: feature:2754859-2754937:-1:exon
so has part: feature:2753266-2753325:-1:exon
so has part: feature:2748862-2749002:-1:exon
so has part: feature:2746272-2746380:-1:exon
so has part: feature:2744920-2745015:-1:exon
so has part: feature:2739771-2739802:-1:exon
so has part: feature:2739613-2739666:-1:exon
so has part: feature:2737156-2737382:-1:exon
so has part: feature:2735046-2735203:-1:exon
so has part: feature:2725904-2726005:-1:exon
so has part: feature:2711728-2711958:-1:exon
so has part: feature:2705945-2706068:-1:exon
so has part: feature:2705063-2705220:-1:exon
so has part: feature:2702564-2702715:-1:exon
so has part: feature:2697267-2697367:-1:exon
so has part: feature:2692913-2693082:-1:exon
so has part: feature:2685745-2685889:-1:exon
so has part: feature:2683028-2683128:-1:exon
so has part: feature:2682314-2682389:-1:exon
so has part: feature:2671374-2671714:-1:exon

XP_032871606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2772206-2772370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766680-2766721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765990-2766079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2760288-2760420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2754859-2754937:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2753266-2753325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2748862-2749002:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2746272-2746380:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2744920-2745015:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2739771-2739802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2739613-2739666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2737156-2737382:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2735046-2735203:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2725904-2726005:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2711728-2711958:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2705945-2706068:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2705063-2705220:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2702564-2702715:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2697267-2697367:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2692913-2693082:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2685745-2685889:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2683028-2683128:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2682314-2682389:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2671374-2671714:-1:exon

r3hdm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: r3hdm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2 isoform X1
translation: MSNSNNTQETLEIMKETEKKLVEESLIKNKPACRTSSKEELEKDGEDPNSQQEFQRRTQNHGHSRKRSKSNSKLKLVRSLAVCEESSHPFTFDGPQETQDVIQLQFTCPSDKEEERSSKDGSEKEDKEKKEKLEKVPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILEFISDDNNQYKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTINTRIPEQRFSDHIKDEKSMDFQKRFILKRDDASLDKDDNQMRVPLRDDRRSKSIEEREEEYQRVRDRIFARESSYNGYLMETRLSKEGSSSILQKRRQLFRGNRECLSRASSSRQSSTENELKSSEPRPWSSTDSDSSNRSLKPPVTKASSFSGISILTRGDSIGSNKSVNRVSKTGLPLGTPELSSSGFVQASVQQPGRTVLSNSAQQQQQLPPTPQQQPMTNHLMSQPLPSLQPSAQPIQYSATSCPQVLLPVSPPQQYTMPEDLGNQFGQMTLSRQGSAEAPETTSAVFQAPVMSQQPGYIIASPGQSLSAPPYSTSGHPTPQQVLQPQGYIQPPQQIPVSYYPPGQYQSSNQQYRPLSQVPYNSQRSQQLPQPAQQTGLQGVIPNQQQTYQGMMGVQQPQTPGLMNSQRNNLGNQMQGMMVQYSSVPSYQVPMSSDSQVVVQQTYQQPVMVPSQTVQGTLPGGGVPVYYSVIPPSQQNSTSQSVGFLQPPGPEQYQMPQSPSPCNPAQMQQQFTGVPAPSHGVVVMQLSVPNGPQPSQPPLLPQWNQCKYYSVEQRGQKPTELYNPDNPTQVNAQLNSPLNSPTQSPTPSPVTNVTNVCPGLAPLPLIAQFSRPVGPAQGDTRYSLLGQPLQYNLPVCPPPVIHGQCQYSAHQGPCSTKHTKRGKKPTLKSASTDLGTGDVVVGRILEVTDLPEGITRTEADKLFSQLSMSGAKIQWLKDSQQRSSGSGDCNRATENSKNAGDLAALYTIVAVFPSTMAAQNATVRLNNSTNRFKLRTAKRSYDLRILERASSQ
SIO_010081: r3hdm2
subclass of: SO_0000673
so part of: r3hdm2
location: complement(join(2671374..2671714,2682305..2682389,2683028..2683128,2685745..2685889,2692913..2693082,2697267..2697367,2702564..2702715,2705063..2705220,2705945..2706068,2711728..2711958,2725904..2726005,2735046..2735203,2737156..2737382,2739613..2739666,2739771..2739802,2744920..2745015,2746272..2746380,2748862..2749002,2753266..2753325,2754859..2754937,2760288..2760420,2765990..2766079,2766680..2766721,2772206..2772370))
location: region:2671374-2772370:-1
so has part: feature:2772206-2772370:-1:exon
so has part: feature:2766680-2766721:-1:exon
so has part: feature:2765990-2766079:-1:exon
so has part: feature:2760288-2760420:-1:exon
so has part: feature:2754859-2754937:-1:exon
so has part: feature:2753266-2753325:-1:exon
so has part: feature:2748862-2749002:-1:exon
so has part: feature:2746272-2746380:-1:exon
so has part: feature:2744920-2745015:-1:exon
so has part: feature:2739771-2739802:-1:exon
so has part: feature:2739613-2739666:-1:exon
so has part: feature:2737156-2737382:-1:exon
so has part: feature:2735046-2735203:-1:exon
so has part: feature:2725904-2726005:-1:exon
so has part: feature:2711728-2711958:-1:exon
so has part: feature:2705945-2706068:-1:exon
so has part: feature:2705063-2705220:-1:exon
so has part: feature:2702564-2702715:-1:exon
so has part: feature:2697267-2697367:-1:exon
so has part: feature:2692913-2693082:-1:exon
so has part: feature:2685745-2685889:-1:exon
so has part: feature:2683028-2683128:-1:exon
so has part: feature:2682305-2682389:-1:exon
so has part: feature:2671374-2671714:-1:exon

XP_032871603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2772206-2772370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766680-2766721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765990-2766079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2760288-2760420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2754859-2754937:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2753266-2753325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2748862-2749002:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2746272-2746380:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2744920-2745015:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2739771-2739802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2739613-2739666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2737156-2737382:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2735046-2735203:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2725904-2726005:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2711728-2711958:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2705945-2706068:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2705063-2705220:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2702564-2702715:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2697267-2697367:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2692913-2693082:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2685745-2685889:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2683028-2683128:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2682305-2682389:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2671374-2671714:-1:exon

r3hdm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: r3hdm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2 isoform X1
translation: MSNSNNTQETLEIMKETEKKLVEESLIKNKPACRTSSKEELEKDGEDPNSQQEFQRRTQNHGHSRKRSKSNSKLKLVRSLAVCEESSHPFTFDGPQETQDVIQLQFTCPSDKEEERSSKDGSEKEDKEKKEKLEKVPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILEFISDDNNQYKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTINTRIPEQRFSDHIKDEKSMDFQKRFILKRDDASLDKDDNQMRVPLRDDRRSKSIEEREEEYQRVRDRIFARESSYNGYLMETRLSKEGSSSILQKRRQLFRGNRECLSRASSSRQSSTENELKSSEPRPWSSTDSDSSNRSLKPPVTKASSFSGISILTRGDSIGSNKSVNRVSKTGLPLGTPELSSSGFVQASVQQPGRTVLSNSAQQQQQLPPTPQQQPMTNHLMSQPLPSLQPSAQPIQYSATSCPQVLLPVSPPQQYTMPEDLGNQFGQMTLSRQGSAEAPETTSAVFQAPVMSQQPGYIIASPGQSLSAPPYSTSGHPTPQQVLQPQGYIQPPQQIPVSYYPPGQYQSSNQQYRPLSQVPYNSQRSQQLPQPAQQTGLQGVIPNQQQTYQGMMGVQQPQTPGLMNSQRNNLGNQMQGMMVQYSSVPSYQVPMSSDSQVVVQQTYQQPVMVPSQTVQGTLPGGGVPVYYSVIPPSQQNSTSQSVGFLQPPGPEQYQMPQSPSPCNPAQMQQQFTGVPAPSHGVVVMQLSVPNGPQPSQPPLLPQWNQCKYYSVEQRGQKPTELYNPDNPTQVNAQLNSPLNSPTQSPTPSPVTNVTNVCPGLAPLPLIAQFSRPVGPAQGDTRYSLLGQPLQYNLPVCPPPVIHGQCQYSAHQGPCSTKHTKRGKKPTLKSASTDLGTGDVVVGRILEVTDLPEGITRTEADKLFSQLSMSGAKIQWLKDSQQRSSGSGDCNRATENSKNAGDLAALYTIVAVFPSTMAAQNATVRLNNSTNRFKLRTAKRSYDLRILERASSQ
SIO_010081: r3hdm2
subclass of: SO_0000673
so part of: r3hdm2
location: complement(join(2671374..2671714,2682305..2682389,2683028..2683128,2685745..2685889,2692913..2693082,2697267..2697367,2702564..2702715,2705063..2705220,2705945..2706068,2711728..2711958,2725904..2726005,2735046..2735203,2737156..2737382,2739613..2739666,2739771..2739802,2744920..2745015,2746272..2746380,2748862..2749002,2753266..2753325,2754859..2754937,2760288..2760420,2765990..2766079,2766680..2766721,2772206..2772370))
location: region:2671374-2772370:-1
so has part: feature:2772206-2772370:-1:exon
so has part: feature:2766680-2766721:-1:exon
so has part: feature:2765990-2766079:-1:exon
so has part: feature:2760288-2760420:-1:exon
so has part: feature:2754859-2754937:-1:exon
so has part: feature:2753266-2753325:-1:exon
so has part: feature:2748862-2749002:-1:exon
so has part: feature:2746272-2746380:-1:exon
so has part: feature:2744920-2745015:-1:exon
so has part: feature:2739771-2739802:-1:exon
so has part: feature:2739613-2739666:-1:exon
so has part: feature:2737156-2737382:-1:exon
so has part: feature:2735046-2735203:-1:exon
so has part: feature:2725904-2726005:-1:exon
so has part: feature:2711728-2711958:-1:exon
so has part: feature:2705945-2706068:-1:exon
so has part: feature:2705063-2705220:-1:exon
so has part: feature:2702564-2702715:-1:exon
so has part: feature:2697267-2697367:-1:exon
so has part: feature:2692913-2693082:-1:exon
so has part: feature:2685745-2685889:-1:exon
so has part: feature:2683028-2683128:-1:exon
so has part: feature:2682305-2682389:-1:exon
so has part: feature:2671374-2671714:-1:exon

XP_032871604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2772206-2772370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766680-2766721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765990-2766079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2760288-2760420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2754859-2754937:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2753266-2753325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2748862-2749002:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2746272-2746380:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2744920-2745015:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2739771-2739802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2739613-2739666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2737156-2737382:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2735046-2735203:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2725904-2726005:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2711728-2711958:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2705945-2706068:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2705063-2705220:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2702564-2702715:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2697267-2697367:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2692913-2693082:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2685745-2685889:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2683028-2683128:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2682305-2682389:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2671374-2671714:-1:exon

r3hdm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: r3hdm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2 isoform X1
translation: MSNSNNTQETLEIMKETEKKLVEESLIKNKPACRTSSKEELEKDGEDPNSQQEFQRRTQNHGHSRKRSKSNSKLKLVRSLAVCEESSHPFTFDGPQETQDVIQLQFTCPSDKEEERSSKDGSEKEDKEKKEKLEKVPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILEFISDDNNQYKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTINTRIPEQRFSDHIKDEKSMDFQKRFILKRDDASLDKDDNQMRVPLRDDRRSKSIEEREEEYQRVRDRIFARESSYNGYLMETRLSKEGSSSILQKRRQLFRGNRECLSRASSSRQSSTENELKSSEPRPWSSTDSDSSNRSLKPPVTKASSFSGISILTRGDSIGSNKSVNRVSKTGLPLGTPELSSSGFVQASVQQPGRTVLSNSAQQQQQLPPTPQQQPMTNHLMSQPLPSLQPSAQPIQYSATSCPQVLLPVSPPQQYTMPEDLGNQFGQMTLSRQGSAEAPETTSAVFQAPVMSQQPGYIIASPGQSLSAPPYSTSGHPTPQQVLQPQGYIQPPQQIPVSYYPPGQYQSSNQQYRPLSQVPYNSQRSQQLPQPAQQTGLQGVIPNQQQTYQGMMGVQQPQTPGLMNSQRNNLGNQMQGMMVQYSSVPSYQVPMSSDSQVVVQQTYQQPVMVPSQTVQGTLPGGGVPVYYSVIPPSQQNSTSQSVGFLQPPGPEQYQMPQSPSPCNPAQMQQQFTGVPAPSHGVVVMQLSVPNGPQPSQPPLLPQWNQCKYYSVEQRGQKPTELYNPDNPTQVNAQLNSPLNSPTQSPTPSPVTNVTNVCPGLAPLPLIAQFSRPVGPAQGDTRYSLLGQPLQYNLPVCPPPVIHGQCQYSAHQGPCSTKHTKRGKKPTLKSASTDLGTGDVVVGRILEVTDLPEGITRTEADKLFSQLSMSGAKIQWLKDSQQRSSGSGDCNRATENSKNAGDLAALYTIVAVFPSTMAAQNATVRLNNSTNRFKLRTAKRSYDLRILERASSQ
SIO_010081: r3hdm2
subclass of: SO_0000673
so part of: r3hdm2
location: complement(join(2671374..2671714,2682305..2682389,2683028..2683128,2685745..2685889,2692913..2693082,2697267..2697367,2702564..2702715,2705063..2705220,2705945..2706068,2711728..2711958,2725904..2726005,2735046..2735203,2737156..2737382,2739613..2739666,2739771..2739802,2744920..2745015,2746272..2746380,2748862..2749002,2753266..2753325,2754859..2754937,2760288..2760420,2765990..2766079,2766680..2766721,2772206..2772370))
location: region:2671374-2772370:-1
so has part: feature:2772206-2772370:-1:exon
so has part: feature:2766680-2766721:-1:exon
so has part: feature:2765990-2766079:-1:exon
so has part: feature:2760288-2760420:-1:exon
so has part: feature:2754859-2754937:-1:exon
so has part: feature:2753266-2753325:-1:exon
so has part: feature:2748862-2749002:-1:exon
so has part: feature:2746272-2746380:-1:exon
so has part: feature:2744920-2745015:-1:exon
so has part: feature:2739771-2739802:-1:exon
so has part: feature:2739613-2739666:-1:exon
so has part: feature:2737156-2737382:-1:exon
so has part: feature:2735046-2735203:-1:exon
so has part: feature:2725904-2726005:-1:exon
so has part: feature:2711728-2711958:-1:exon
so has part: feature:2705945-2706068:-1:exon
so has part: feature:2705063-2705220:-1:exon
so has part: feature:2702564-2702715:-1:exon
so has part: feature:2697267-2697367:-1:exon
so has part: feature:2692913-2693082:-1:exon
so has part: feature:2685745-2685889:-1:exon
so has part: feature:2683028-2683128:-1:exon
so has part: feature:2682305-2682389:-1:exon
so has part: feature:2671374-2671714:-1:exon

XP_032871605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2772206-2772370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766680-2766721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2765990-2766079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2760288-2760420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2754859-2754937:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2753266-2753325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2748862-2749002:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2746272-2746380:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2744920-2745015:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2739771-2739802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2739613-2739666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2737156-2737382:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2735046-2735203:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2725904-2726005:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2711728-2711958:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2705945-2706068:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2705063-2705220:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2702564-2702715:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2697267-2697367:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2692913-2693082:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2685745-2685889:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2683028-2683128:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2682305-2682389:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2671374-2671714:-1:exon

LOC116968816
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116968816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2708008..2709379)
location: region:2708008-2709379:-1
so has part: feature:2708008-2709379:-1:exon
subclass of: SO_0000011

116968816
type: Gene
SIO_000068: ncbigene

position:2708008:-1
position: 2708008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2709379:-1
position: 2709379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2708008-2709379:-1:exon

LOC116968816
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116968816
product: uncharacterized LOC116968816
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004410536.1
SIO_010081: LOC116968816
subclass of: SO_0000673
so part of: LOC116968816
location: complement(join(2708008..2708881,2709050..2709379))
location: region:2708008-2709379:-1
so has part: feature:2709050-2709379:-1:exon
so has part: feature:2708008-2708881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2709050-2709379:-1:exon

position:2709050:-1
position: 2709050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2708008-2708881:-1:exon

position:2708881:-1
position: 2708881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gli1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: gli1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2874669..2939673
location: region:2874669-2939673:1
so has part: feature:2874669-2939673:1:exon
subclass of: SO_0000010

116968743
type: Gene
SIO_000068: ncbigene

position:2874669:1
position: 2874669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2939673:1
position: 2939673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2874669-2939673:1:exon

gli1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gli1
product: GLI family zinc finger 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033015548.1
SIO_010081: gli1
subclass of: SO_0000673
so part of: gli1
location: join(2874669..2875241,2889719..2889847,2916903..2917008,2920447..2920622,2923067..2923168,2924846..2925053,2926459..2926663,2927971..2928078,2929134..2929274,2929936..2930085,2931158..2931322,2933393..2933665,2934488..2934785,2936815..2939673)
location: region:2874669-2939673:1
so has part: feature:2874669-2875241:1:exon
so has part: feature:2889719-2889847:1:exon
so has part: feature:2916903-2917008:1:exon
so has part: feature:2920447-2920622:1:exon
so has part: feature:2923067-2923168:1:exon
so has part: feature:2924846-2925053:1:exon
so has part: feature:2926459-2926663:1:exon
so has part: feature:2927971-2928078:1:exon
so has part: feature:2929134-2929274:1:exon
so has part: feature:2929936-2930085:1:exon
so has part: feature:2931158-2931322:1:exon
so has part: feature:2933393-2933665:1:exon
so has part: feature:2934488-2934785:1:exon
so has part: feature:2936815-2939673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2874669-2875241:1:exon

position:2875241:1
position: 2875241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2889719-2889847:1:exon

position:2889719:1
position: 2889719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2889847:1
position: 2889847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2916903-2917008:1:exon

position:2916903:1
position: 2916903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2917008:1
position: 2917008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2920447-2920622:1:exon

position:2920447:1
position: 2920447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2920622:1
position: 2920622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2923067-2923168:1:exon

position:2923067:1
position: 2923067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2923168:1
position: 2923168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2924846-2925053:1:exon

position:2924846:1
position: 2924846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2925053:1
position: 2925053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2926459-2926663:1:exon

position:2926459:1
position: 2926459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2926663:1
position: 2926663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2927971-2928078:1:exon

position:2927971:1
position: 2927971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2928078:1
position: 2928078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2929134-2929274:1:exon