Amblyraja radiata isolate CabotCenter1 chromosome 38, sAmbRad1.1.pri, whole genome shotgun sequence.
type: Entry
definition: Amblyraja radiata isolate CabotCenter1 chromosome 38, sAmbRad1.1.pri, whole genome shotgun sequence.
sequence version: NC_045993.1
sequence date: 2021-04-05
sequence: sequence
division: CON
label: NC_045993.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA610638
dblink: SAMN09948523
keyword: WGS
keyword: RefSeq
source: Amblyraja radiata (thorny skate)
organism: Amblyraja radiata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Amblyraja.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021403.1.\nAssembly name: sAmbRad1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/21. The original whole-genome shotgun project has the\naccession JAAGWR000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 13-JAN-2020\nAssembly Method :: Canu v. 1.7; purge_haplotigs v. bitbucket\n 7.10.2018; scaff10x v. 4.1.0; Bionano\n Solve DLS v. 3.3; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes Illumina polishing v.\n 1.3.1; purge_dups v.\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n gEVAL manual curation v. 2020-01-13; VGP\n assembly pipeline v. 1.5\nAssembly Name :: sAmbRad1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 128.24x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Amblyraja radiata Updated Annotation\n Release 100.20210331\nAnnotation Version :: 100.20210331\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 19490429
topology: linear
so has quality: SO_0000987
location: 1..19490429
location: region:1-19490429:1
RO_0002162: 386614

NC_045993
type: RefSeq
SIO_000068: refseq

PRJNA610638
type: BioProject
SIO_000068: bioproject

SAMN09948523
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19490429:1
position: 19490429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19490429:1:source
so part of: sequence
organism: Amblyraja radiata
mol type: genomic DNA
isolate: CabotCenter1
chromosome: 38
sex: male
tissue type: testis, liver
country: USA: Gulf of Main
lat lon: 43.1336 N 68.3266 W
collection date: 2017-09-18
collected by: Jeff Kneebone

386614
type: Taxonomy
SIO_000068: taxonomy

LOC116966977
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15278..18614)
location: region:15278-18614:-1
so has part: feature:15278-18614:-1:exon
subclass of: SO_0000011

116966977
type: Gene
SIO_000068: ncbigene

position:15278:-1
position: 15278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18614:-1
position: 18614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15278-18614:-1:exon

LOC116966977
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116966977
product: uncharacterized LOC116966977
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004410104.1
SIO_010081: LOC116966977
subclass of: SO_0000673
so part of: LOC116966977
location: complement(join(15278..15428,18095..18148,18585..18614))
location: region:15278-18614:-1
so has part: feature:18585-18614:-1:exon
so has part: feature:18095-18148:-1:exon
so has part: feature:15278-15428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18585-18614:-1:exon

position:18585:-1
position: 18585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18095-18148:-1:exon

position:18095:-1
position: 18095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18148:-1
position: 18148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15278-15428:-1:exon

position:15428:-1
position: 15428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116967104
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116967104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(32166..45490)
location: region:32166-45490:-1
so has part: feature:32166-45490:-1:exon
subclass of: SO_0000011

116967104
type: Gene
SIO_000068: ncbigene

position:32166:-1
position: 32166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45490:-1
position: 45490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32166-45490:-1:exon

LOC116967104
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116967104
product: uncharacterized LOC116967104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004410142.1
SIO_010081: LOC116967104
subclass of: SO_0000673
so part of: LOC116967104
location: complement(join(32166..32177,35061..35066,43758..45411,45448..45490))
location: region:32166-45490:-1
so has part: feature:45448-45490:-1:exon
so has part: feature:43758-45411:-1:exon
so has part: feature:35061-35066:-1:exon
so has part: feature:32166-32177:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45448-45490:-1:exon

position:45448:-1
position: 45448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43758-45411:-1:exon

position:43758:-1
position: 43758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45411:-1
position: 45411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:35061-35066:-1:exon

position:35061:-1
position: 35061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35066:-1
position: 35066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:32166-32177:-1:exon

position:32177:-1
position: 32177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116967103
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116967103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 32671..45156
location: region:32671-45156:1
so has part: feature:32671-45156:1:exon
subclass of: SO_0000011

116967103
type: Gene
SIO_000068: ncbigene

position:32671:1
position: 32671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45156:1
position: 45156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32671-45156:1:exon

LOC116967103
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116967103
product: uncharacterized LOC116967103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004410141.1
SIO_010081: LOC116967103
subclass of: SO_0000673
so part of: LOC116967103
location: join(32671..32830,39450..39548,44293..45087,45120..45156)
location: region:32671-45156:1
so has part: feature:32671-32830:1:exon
so has part: feature:39450-39548:1:exon
so has part: feature:44293-45087:1:exon
so has part: feature:45120-45156:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32671-32830:1:exon

position:32830:1
position: 32830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39450-39548:1:exon

position:39450:1
position: 39450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39548:1
position: 39548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:44293-45087:1:exon

position:44293:1
position: 44293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45087:1
position: 45087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:45120-45156:1:exon

position:45120:1
position: 45120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116967102
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116967102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(50901..51459)
location: region:50901-51459:-1
so has part: feature:50901-51459:-1:exon
subclass of: SO_0000011

116967102
type: Gene
SIO_000068: ncbigene

position:50901:-1
position: 50901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51459:-1
position: 51459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50901-51459:-1:exon

LOC116967102
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116967102
product: uncharacterized LOC116967102
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XR_004410140.1
SIO_010081: LOC116967102
subclass of: SO_0000673
so part of: LOC116967102
location: complement(join(50901..50956,51083..51459))
location: region:50901-51459:-1
so has part: feature:51083-51459:-1:exon
so has part: feature:50901-50956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51083-51459:-1:exon

position:51083:-1
position: 51083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50901-50956:-1:exon

position:50956:-1
position: 50956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

chmp2a
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: chmp2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(51983..64472)
location: region:51983-64472:-1
so has part: feature:51983-64472:-1:exon
subclass of: SO_0000010

116967100
type: Gene
SIO_000068: ncbigene

position:51983:-1
position: 51983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64472:-1
position: 64472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51983-64472:-1:exon

chmp2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: chmp2a
product: charged multivesicular body protein 2A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 22 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033013600.1
SIO_010081: chmp2a
subclass of: SO_0000673
so part of: chmp2a
location: complement(join(51983..52160,53323..53384,54166..54296,56225..56404,58558..58738,64387..64441))
location: region:51983-64441:-1
so has part: feature:64387-64441:-1:exon
so has part: feature:58558-58738:-1:exon
so has part: feature:56225-56404:-1:exon
so has part: feature:54166-54296:-1:exon
so has part: feature:53323-53384:-1:exon
so has part: feature:51983-52160:-1:exon

position:64441:-1
position: 64441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64387-64441:-1:exon

position:64387:-1
position: 64387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:58558-58738:-1:exon

position:58558:-1
position: 58558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58738:-1
position: 58738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:56225-56404:-1:exon

position:56225:-1
position: 56225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56404:-1
position: 56404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:54166-54296:-1:exon

position:54166:-1
position: 54166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54296:-1
position: 54296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:53323-53384:-1:exon

position:53323:-1
position: 53323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53384:-1
position: 53384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:51983-52160:-1:exon

position:52160:-1
position: 52160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

chmp2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: chmp2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 2a isoform X2
translation: MNAIFGKRKTPEEMLRQNQRALTRAMREMDRERMKLEQQEKKIIGDIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMKANIQAVSLKIQTLKSNNTMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAIVSQVLDELGLNLTDELSNLPSTGASLSVAAGKKAEAAVLEDADADLEKRLKNLRKD
SIO_010081: chmp2a
subclass of: SO_0000673
so part of: chmp2a
location: complement(join(52042..52160,53323..53384,54166..54296,56225..56404,58558..58725))
location: region:52042-58725:-1
so has part: feature:58558-58725:-1:exon
so has part: feature:56225-56404:-1:exon
so has part: feature:54166-54296:-1:exon
so has part: feature:53323-53384:-1:exon
so has part: feature:52042-52160:-1:exon

XP_032869491.1
type: Protein
SIO_000068: ncbiprotein

position:52042:-1
position: 52042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58725:-1
position: 58725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58558-58725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56225-56404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54166-54296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53323-53384:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52042-52160:-1:exon

chmp2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: chmp2a
product: charged multivesicular body protein 2A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033013596.1
SIO_010081: chmp2a
subclass of: SO_0000673
so part of: chmp2a
location: complement(join(52420..52557,53291..53384,54166..54296,56225..56404,58558..58738,64387..64472))
location: region:52420-64472:-1
so has part: feature:64387-64472:-1:exon
so has part: feature:58558-58738:-1:exon
so has part: feature:56225-56404:-1:exon
so has part: feature:54166-54296:-1:exon
so has part: feature:53291-53384:-1:exon
so has part: feature:52420-52557:-1:exon

position:52420:-1
position: 52420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64387-64472:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58558-58738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:56225-56404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:54166-54296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:53291-53384:-1:exon

position:53291:-1
position: 53291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:52420-52557:-1:exon

position:52557:-1
position: 52557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

chmp2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: chmp2a
product: charged multivesicular body protein 2A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033013599.1
SIO_010081: chmp2a
subclass of: SO_0000673
so part of: chmp2a
location: complement(join(52420..52557,53291..53384,54166..54296,56225..56404,58558..58734,64387..64469))
location: region:52420-64469:-1
so has part: feature:64387-64469:-1:exon
so has part: feature:58558-58734:-1:exon
so has part: feature:56225-56404:-1:exon
so has part: feature:54166-54296:-1:exon
so has part: feature:53291-53384:-1:exon
so has part: feature:52420-52557:-1:exon

position:64469:-1
position: 64469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64387-64469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58558-58734:-1:exon

position:58734:-1
position: 58734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:56225-56404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:54166-54296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:53291-53384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52420-52557:-1:exon

chmp2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: chmp2a
product: charged multivesicular body protein 2A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033013598.1
SIO_010081: chmp2a
subclass of: SO_0000673
so part of: chmp2a
location: complement(join(52420..52557,53291..53384,54166..54296,56225..56404,58558..58734,64365..64463))
location: region:52420-64463:-1
so has part: feature:64365-64463:-1:exon
so has part: feature:58558-58734:-1:exon
so has part: feature:56225-56404:-1:exon
so has part: feature:54166-54296:-1:exon
so has part: feature:53291-53384:-1:exon
so has part: feature:52420-52557:-1:exon

position:64463:-1
position: 64463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64365-64463:-1:exon

position:64365:-1
position: 64365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:58558-58734:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:56225-56404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:54166-54296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:53291-53384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52420-52557:-1:exon

chmp2a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: chmp2a
product: charged multivesicular body protein 2A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033013597.1
SIO_010081: chmp2a
subclass of: SO_0000673
so part of: chmp2a
location: complement(join(52420..52557,53291..53384,54166..54296,56225..56404,58558..58738,64365..64463))
location: region:52420-64463:-1
so has part: feature:64365-64463:-1:exon
so has part: feature:58558-58738:-1:exon
so has part: feature:56225-56404:-1:exon
so has part: feature:54166-54296:-1:exon
so has part: feature:53291-53384:-1:exon
so has part: feature:52420-52557:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64365-64463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58558-58738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:56225-56404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:54166-54296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:53291-53384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52420-52557:-1:exon

chmp2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: chmp2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 2a isoform X1
translation: MNAIFGKRKTPEEMLRQNQRALTRAMREMDRERMKLEQQEKKIIGDIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMKANIQAVSLKIQTLKSNNTMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAIVSQVLDELGLNLTDELSSEYCQRSTQKQVYVECIHRRYRCTWSVSADTGVSRFPSLVAVVLPGDFSNP
SIO_010081: chmp2a
subclass of: SO_0000673
so part of: chmp2a
location: complement(join(52435..52557,53291..53384,54166..54296,56225..56404,58558..58725))
location: region:52435-58725:-1
so has part: feature:58558-58725:-1:exon
so has part: feature:56225-56404:-1:exon
so has part: feature:54166-54296:-1:exon
so has part: feature:53291-53384:-1:exon
so has part: feature:52435-52557:-1:exon

XP_032869487.1
type: Protein
SIO_000068: ncbiprotein

position:52435:-1
position: 52435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58558-58725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56225-56404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54166-54296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53291-53384:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52435-52557:-1:exon

chmp2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: chmp2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 2a isoform X1
translation: MNAIFGKRKTPEEMLRQNQRALTRAMREMDRERMKLEQQEKKIIGDIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMKANIQAVSLKIQTLKSNNTMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAIVSQVLDELGLNLTDELSSEYCQRSTQKQVYVECIHRRYRCTWSVSADTGVSRFPSLVAVVLPGDFSNP
SIO_010081: chmp2a
subclass of: SO_0000673
so part of: chmp2a
location: complement(join(52435..52557,53291..53384,54166..54296,56225..56404,58558..58725))
location: region:52435-58725:-1
so has part: feature:58558-58725:-1:exon
so has part: feature:56225-56404:-1:exon
so has part: feature:54166-54296:-1:exon
so has part: feature:53291-53384:-1:exon
so has part: feature:52435-52557:-1:exon

XP_032869488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58558-58725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56225-56404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54166-54296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53291-53384:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52435-52557:-1:exon

chmp2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: chmp2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 2a isoform X1
translation: MNAIFGKRKTPEEMLRQNQRALTRAMREMDRERMKLEQQEKKIIGDIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMKANIQAVSLKIQTLKSNNTMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAIVSQVLDELGLNLTDELSSEYCQRSTQKQVYVECIHRRYRCTWSVSADTGVSRFPSLVAVVLPGDFSNP
SIO_010081: chmp2a
subclass of: SO_0000673
so part of: chmp2a
location: complement(join(52435..52557,53291..53384,54166..54296,56225..56404,58558..58725))
location: region:52435-58725:-1
so has part: feature:58558-58725:-1:exon
so has part: feature:56225-56404:-1:exon
so has part: feature:54166-54296:-1:exon
so has part: feature:53291-53384:-1:exon
so has part: feature:52435-52557:-1:exon

XP_032869489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58558-58725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56225-56404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54166-54296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53291-53384:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52435-52557:-1:exon

chmp2a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: chmp2a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 2a isoform X1
translation: MNAIFGKRKTPEEMLRQNQRALTRAMREMDRERMKLEQQEKKIIGDIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMKANIQAVSLKIQTLKSNNTMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAIVSQVLDELGLNLTDELSSEYCQRSTQKQVYVECIHRRYRCTWSVSADTGVSRFPSLVAVVLPGDFSNP
SIO_010081: chmp2a
subclass of: SO_0000673
so part of: chmp2a
location: complement(join(52435..52557,53291..53384,54166..54296,56225..56404,58558..58725))
location: region:52435-58725:-1
so has part: feature:58558-58725:-1:exon
so has part: feature:56225-56404:-1:exon
so has part: feature:54166-54296:-1:exon
so has part: feature:53291-53384:-1:exon
so has part: feature:52435-52557:-1:exon

XP_032869490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58558-58725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56225-56404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54166-54296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53291-53384:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52435-52557:-1:exon

ube2m
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ube2m
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(67811..91083)
location: region:67811-91083:-1
so has part: feature:67811-91083:-1:exon
subclass of: SO_0000010

116967063
type: Gene
SIO_000068: ncbigene

position:67811:-1
position: 67811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91083:-1
position: 91083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67811-91083:-1:exon

ube2m
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ube2m
product: ubiquitin conjugating enzyme E2 M
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_033013529.1
SIO_010081: ube2m
subclass of: SO_0000673
so part of: ube2m
location: complement(join(67811..70245,70756..70819,74866..74969,76439..76477,77308..77402,90880..91083))
location: region:67811-91083:-1
so has part: feature:90880-91083:-1:exon
so has part: feature:77308-77402:-1:exon
so has part: feature:76439-76477:-1:exon
so has part: feature:74866-74969:-1:exon
so has part: feature:70756-70819:-1:exon
so has part: feature:67811-70245:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90880-91083:-1:exon

position:90880:-1
position: 90880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77308-77402:-1:exon

position:77308:-1
position: 77308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77402:-1
position: 77402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:76439-76477:-1:exon

position:76439:-1
position: 76439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76477:-1
position: 76477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:74866-74969:-1:exon

position:74866:-1
position: 74866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74969:-1
position: 74969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:70756-70819:-1:exon

position:70756:-1
position: 70756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70819:-1
position: 70819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:67811-70245:-1:exon

position:70245:-1
position: 70245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ube2m
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ube2m
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD8-conjugating enzyme Ubc12
translation: MIKLFSLKQQKKEEDAAGAAKSGAKKASAAQLRIQKDINELNLPKTCEIVFPDPDDLLNFKLIICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCLK
SIO_010081: ube2m
subclass of: SO_0000673
so part of: ube2m
location: complement(join(70105..70245,70756..70819,74866..74969,76439..76477,77308..77402,90880..90988))
location: region:70105-90988:-1
so has part: feature:90880-90988:-1:exon
so has part: feature:77308-77402:-1:exon
so has part: feature:76439-76477:-1:exon
so has part: feature:74866-74969:-1:exon
so has part: feature:70756-70819:-1:exon
so has part: feature:70105-70245:-1:exon

XP_032869420.1
type: Protein
SIO_000068: ncbiprotein

position:70105:-1
position: 70105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90988:-1
position: 90988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90880-90988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77308-77402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76439-76477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74866-74969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70756-70819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70105-70245:-1:exon

trim28
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trim28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(95811..141067)
location: region:95811-141067:-1
so has part: feature:95811-141067:-1:exon
subclass of: SO_0000010

116966981
type: Gene
SIO_000068: ncbigene

position:95811:-1
position: 95811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141067:-1
position: 141067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95811-141067:-1:exon

trim28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: trim28
product: tripartite motif containing 28, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033013398.1
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(95811..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,107301..107492,113513..113863,115071..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133130..133236,140661..141067))
location: region:95811-141067:-1
so has part: feature:140661-141067:-1:exon
so has part: feature:133130-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115071-116113:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:107301-107492:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:95811-96479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140661-141067:-1:exon

position:140661:-1
position: 140661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133130-133236:-1:exon

position:133130:-1
position: 133130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133236:-1
position: 133236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

position:130540:-1
position: 130540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130687:-1
position: 130687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

position:128108:-1
position: 128108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128240:-1
position: 128240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

position:125271:-1
position: 125271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125387:-1
position: 125387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

position:118526:-1
position: 118526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118640:-1
position: 118640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

position:117810:-1
position: 117810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117956:-1
position: 117956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

position:117057:-1
position: 117057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117174:-1
position: 117174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:115071-116113:-1:exon

position:115071:-1
position: 115071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116113:-1
position: 116113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:113513-113863:-1:exon

position:113513:-1
position: 113513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113863:-1
position: 113863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:107301-107492:-1:exon

position:107301:-1
position: 107301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107492:-1
position: 107492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:106150-106222:-1:exon

position:106150:-1
position: 106150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106222:-1
position: 106222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:102886-102934:-1:exon

position:102886:-1
position: 102886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102934:-1
position: 102934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:102014-102200:-1:exon

position:102014:-1
position: 102014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102200:-1
position: 102200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:101323-101654:-1:exon

position:101323:-1
position: 101323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101654:-1
position: 101654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:100601-100724:-1:exon

position:100601:-1
position: 100601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100724:-1
position: 100724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:99479-99556:-1:exon

position:99479:-1
position: 99479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99556:-1
position: 99556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:98830-98961:-1:exon

position:98830:-1
position: 98830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98961:-1
position: 98961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:95811-96479:-1:exon

position:96479:-1
position: 96479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trim28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: trim28
product: tripartite motif containing 28, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033013395.1
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(95811..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,107301..107492,110630..110797,113513..113863,115071..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133130..133236,140661..141026))
location: region:95811-141026:-1
so has part: feature:140661-141026:-1:exon
so has part: feature:133130-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115071-116113:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:110630-110797:-1:exon
so has part: feature:107301-107492:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:95811-96479:-1:exon

position:141026:-1
position: 141026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140661-141026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133130-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115071-116113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110630-110797:-1:exon

position:110630:-1
position: 110630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110797:-1
position: 110797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:107301-107492:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:95811-96479:-1:exon

trim28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: trim28
product: tripartite motif containing 28, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033013396.1
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(95811..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,107301..107492,110630..110797,113513..113863,115071..115531,115640..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133121..133236,140661..141026))
location: region:95811-141026:-1
so has part: feature:140661-141026:-1:exon
so has part: feature:133121-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115640-116113:-1:exon
so has part: feature:115071-115531:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:110630-110797:-1:exon
so has part: feature:107301-107492:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:95811-96479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140661-141026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133121-133236:-1:exon

position:133121:-1
position: 133121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115640-116113:-1:exon

position:115640:-1
position: 115640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:115071-115531:-1:exon

position:115531:-1
position: 115531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110630-110797:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107301-107492:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:95811-96479:-1:exon

trim28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: trim28
product: tripartite motif containing 28, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033013402.1
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(95811..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,113513..113863,115071..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133121..133236,140661..141026))
location: region:95811-141026:-1
so has part: feature:140661-141026:-1:exon
so has part: feature:133121-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115071-116113:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:95811-96479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140661-141026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133121-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115071-116113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:95811-96479:-1:exon

trim28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: trim28
product: tripartite motif containing 28, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033013397.1
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(95811..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,107301..107492,113513..113863,115071..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133121..133236,140661..141026))
location: region:95811-141026:-1
so has part: feature:140661-141026:-1:exon
so has part: feature:133121-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115071-116113:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:107301-107492:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:95811-96479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140661-141026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133121-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115071-116113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107301-107492:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:95811-96479:-1:exon

trim28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: trim28
product: tripartite motif containing 28, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033013399.1
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(95811..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,110630..110797,113513..113863,115071..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133121..133236,140661..141026))
location: region:95811-141026:-1
so has part: feature:140661-141026:-1:exon
so has part: feature:133121-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115071-116113:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:110630-110797:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:95811-96479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140661-141026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133121-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115071-116113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110630-110797:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:95811-96479:-1:exon

trim28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: trim28
product: tripartite motif containing 28, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_033013394.1
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(95811..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,107301..107492,110630..110797,113513..113863,115071..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133121..133236,140661..141026))
location: region:95811-141026:-1
so has part: feature:140661-141026:-1:exon
so has part: feature:133121-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115071-116113:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:110630-110797:-1:exon
so has part: feature:107301-107492:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:95811-96479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140661-141026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133121-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115071-116113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110630-110797:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107301-107492:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:95811-96479:-1:exon

trim28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: trim28
product: tripartite motif containing 28, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033013401.1
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(95811..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,107301..107492,110630..110797,113513..113863,115071..115594,115955..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133121..133236,140661..141025))
location: region:95811-141025:-1
so has part: feature:140661-141025:-1:exon
so has part: feature:133121-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115955-116113:-1:exon
so has part: feature:115071-115594:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:110630-110797:-1:exon
so has part: feature:107301-107492:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:95811-96479:-1:exon

position:141025:-1
position: 141025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140661-141025:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133121-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115955-116113:-1:exon

position:115955:-1
position: 115955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:115071-115594:-1:exon

position:115594:-1
position: 115594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110630-110797:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107301-107492:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:95811-96479:-1:exon

trim28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: trim28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription intermediary factor 1-beta isoform X5
translation: MEAAVVLECGVGGDPGPERGVDGPLVGPEADADALRLVEPDPGLLERCGVCRGRLRERQPRLLPCLHSVCKGCLHGGVDASGSPQADGLICCPVCRQQCYIRDIIENYFLRDTGELDPGSNKKVCTCCEDNAVSSSFCVECAEWLCDACVEAHQRVKFTKDHTLSKKNPGFTVDGRTNCERPIFCSIHRQETLKLFCETCDTLTCRDCQLLTHKDHRYQFLEEAIKNQKMTLENLVKKLTEKKTQLQVTTKQVRTRLRDVQDMQKKVQVEIKMAILQIMRELNKRGKTLIQRVERLAEEQQLKLEQQHLSMSKLYRQMDHVLKFASWAVSTDNSTALLLCKKLIFYQLQRGLQSKVNTEELKNDIITFLWDSAFWTKNAANFGNVMIEVPSTLSAHISVQHPSMSVHCPLPIAQHQPAPQHQSSHCPQPVAQHQSAPQHQPAPHHQPAPHHQPAPHHQPAPQHQPAPQHQSAPHHQPAPQHQSAPHHQPAPHHQPAPHHQPAPHHQSAPQHQSAPHHQSAPHHQSAPQYQSSHCPQPVAQHQSASQHQSAPQHQSSPHHQSAPQYQSSQCPQPVAQHQSAPQYQSSHCSQTLAQHQSNNRMIAQQGNSWQNHVPMQPPHRLPPPNYQQTALPPPRQPPPPQSTQQAIIRQPHTAASWPPVNSLSRMQQAVQLVKPTSTMTSANGRYLQQMQVQVVQQGSILPMQQQQQQQQQQQQLMGQVLLLPQMNGIQVRQPQGHTQGAAKQSISGGQTATLYQQMSMHQPTVVSKLPSPTPRQQLSFGPSTAGGVQSPPVQQISTSTGLSNTPGSRPSPPVQQALRSNTTTSRQLLTTAAPQHAYSNIPAAGHSYFCAGPPLVPQQVGIDDSLLYSLILTSNGTSPWSEAGAEGCVKGQPTCHVPRAFTEPRRGVPFKLSNASSTTEQEGQGNPIKQLQEASESGCNPLQCTLEHAGGSSDLNVKPKLNMKVPYVRLERLQIDLSTDTELPTFKLLPGSGQDEFSLIIIEGEGLPLNPPITAPTLESTLTPPNSVSPASVTEIEFVFNERTEVTSKRSHHALSPTPSPSEKSPGSIPDLKASPLCSVSEKGEEQDEVLCVVCGKGGELSCCSHCLKVFHVGCHVPALLSMPSVEWTCSLCVDLATSEVQSESSSTLANIGNATKDGLGAVDQQKCERLLLLLLSHKMCQAFHNPSGASQLKRQPLDLSSLRAKLEKTSTPHYSSPDEFVLEARLLFKTFELSQEKKEVAESVLMLESFFEEKLADVFNGKTFGSRAAKQGLESGSMHCDQTDCRDGSRHTEQADSGPTQPKRQRLDEGQPL
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(96243..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,107301..107492,113513..113863,115071..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133130..133236,140661..140922))
location: region:96243-140922:-1
so has part: feature:140661-140922:-1:exon
so has part: feature:133130-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115071-116113:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:107301-107492:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:96243-96479:-1:exon

XP_032869289.1
type: Protein
SIO_000068: ncbiprotein

position:96243:-1
position: 96243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140922:-1
position: 140922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140661-140922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133130-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115071-116113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107301-107492:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:96243-96479:-1:exon

trim28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: trim28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription intermediary factor 1-beta isoform X2
translation: MEAAVVLECGVGGDPGPERGVDGPLVGPEADADALRLVEPDPGLLERCGVCRGRLRERQPRLLPCLHSVCKGCLHGGVDASGSPQADGLICCPVCRQQCYIRDIIENYFLRDTGELDPGSNKKVCTCCEDNAVSSSFCVECAEWLCDACVEAHQRVKFTKDHTLSKKNPGFTVDGRTNCERPIFCSIHRQETLKLFCETCDTLTCRDCQLLTHKDHRYQFLEEAIKNQKMTLENLVKKLTEKKTQLQVTTKQVRTRLRDVQDMQKKVQVEIKMAILQIMRELNKRGKTLIQRVERLAEEQQLKLEQQHLSMSKLYRQMDHVLKFASWAVSTDNSTALLLCKKLIFYQLQRGLQSKVNTEELKNDIITFLWDSAFWTKNAANFGNVMIEVPSTLSAHISVQHPSMSVHCPLPIAQHQPAPQHQSSHCPQPVAQHQSAPQHQPAPHHQPAPHHQPAPHHQPAPQHQPAPQHQSAPHHQPAPQHQSAPHHQPAPHHQPAPHHQPAPHHQSAPQHQSAPHHQSAPHHQSAPQYQSSHCPQPVAQHQSASQHQSAPQHQSSPHHQSAPQYQSSQCPQPVAQHQSAPQYQSSHCSQTLAQHQSNNRMIAQQGNSWQNHVPMQPPHRLPPPNYQQTALPPPRQPPPPQSTQQAIIRQPHTAASWPPVNSLSRMQQAVQLVKPTSTMTSANGRYLQQMQVQVVQQGSILPMQQQQQQQQQQQQLMGQVLLLPQMNGIQVRQPQGHTQGAAKQSISGGQTATLYQQMSMHQPTVVSKLPSPTPRQQLSFGPSTAGGVQSPPVQQISTSTGLSNTPGSRPSPPVQQALRSNTTTSRQLLTTAAPQHAYSNIPAAGHSTPVGAHCHRSPTSSHRLGNSPVDQLKMLVQQATSYPRVILPHRDGPATAHHFAQEQYFCAGPPLVPQQVGIDDSLLYSLILTSNGTSPWSEAGAEGCVKGQPTCHVPRAFTEPRRGVPFKLSNASSTTEQEGQGNPIKQLQEASESGCNPLQCTLEHAGGSSDLNVKPKLNMKVPYVRLERLQIDLSTDTELPTFKLLPGSGQDEFSLIIIEGEGLPLNPPITAPTLESTLTPPNSVSPASVTEIEFVFNERTEVTSKRSHHALSPTPSPSEKSPGSIPDLKASPLCSVSEKGEEQDEVLCVVCGKGGELSCCSHCLKVFHVGCHVPALLSMPSVEWTCSLCVDLATSEVQSESSSTLANIGNATKDGLGAVDQQKCERLLLLLLSHKMCQAFHNPSGASQLKRQPLDLSSLRAKLEKTSTPHYSSPDEFVLEARLLFKTFELSQEKKEVAESVLMLESFFEEKLADVFNGKTFGSRAAKQGLESGSMHCDQTDCRDGSRHTEQADSGPTQPKRQRLDEGQPL
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(96243..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,107301..107492,110630..110797,113513..113863,115071..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133130..133236,140661..140922))
location: region:96243-140922:-1
so has part: feature:140661-140922:-1:exon
so has part: feature:133130-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115071-116113:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:110630-110797:-1:exon
so has part: feature:107301-107492:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:96243-96479:-1:exon

XP_032869286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140661-140922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133130-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115071-116113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110630-110797:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107301-107492:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:96243-96479:-1:exon

trim28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: trim28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription intermediary factor 1-beta isoform X8
translation: MEAAVVLECGVGGDPGPERGVDGPLVGPEADADALRLVEPDPGLLERCGVCRGRLRERQPRLLPCLHSVCKGCLHGGVDASGSPQADGLICCPVCRQQCYIRDIIENYFLRDTGELDPGSNKKVSQVCTCCEDNAVSSSFCVECAEWLCDACVEAHQRVKFTKDHTLSKKNPGFTVDGRTNCERPIFCSIHRQETLKLFCETCDTLTCRDCQLLTHKDHRYQFLEEAIKNQKMTLENLVKKLTEKKTQLQVTTKQVRTRLRDVQDMQKKVQVEIKMAILQIMRELNKRGKTLIQRVERLAEEQQLKLEQQHLSMSKLYRQMDHVLKFASWAVSTDNSTALLLCKKLIFYQLQRGLQSKVNTEELKNDIITFLWDSAFWTKNAANFGNVMIEVPSTLSAHISVQHPSMSVHCPLPIAQHQPAPQHQSSHCPQPVAQHQSAPHHQSAPQYQSSQCPQPVAQHQSAPQYQSSHCSQTLAQHQSNNRMIAQQGNSWQNHVPMQPPHRLPPPNYQQTALPPPRQPPPPQSTQQAIIRQPHTAASWPPVNSLSRMQQAVQLVKPTSTMTSANGRYLQQMQVQVVQQGSILPMQQQQQQQQQQQQLMGQVLLLPQMNGIQVRQPQGHTQGAAKQSISGGQTATLYQQMSMHQPTVVSKLPSPTPRQQLSFGPSTAGGVQSPPVQQISTSTGLSNTPGSRPSPPVQQALRSNTTTSRQLLTTAAPQHAYSNIPAAGHSTPVGAHCHRSPTSSHRLGNSPVDQLKMLVQQATSYPRVILPHRDGPATAHHFAQEQYFCAGPPLVPQQVGIDDSLLYSLILTSNGTSPWSEAGAEGCVKGQPTCHVPRAFTEPRRGVPFKLSNASSTTEQEGQGNPIKQLQEASESGCNPLQCTLEHAGGSSDLNVKPKLNMKVPYVRLERLQIDLSTDTELPTFKLLPGSGQDEFSLIIIEGEGLPLNPPITAPTLESTLTPPNSVSPASVTEIEFVFNERTEVTSKRSHHALSPTPSPSEKSPGSIPDLKASPLCSVSEKGEEQDEVLCVVCGKGGELSCCSHCLKVFHVGCHVPALLSMPSVEWTCSLCVDLATSEVQSESSSTLANIGNATKDGLGAVDQQKCERLLLLLLSHKMCQAFHNPSGASQLKRQPLDLSSLRAKLEKTSTPHYSSPDEFVLEARLLFKTFELSQEKKEVAESVLMLESFFEEKLADVFNGKTFGSRAAKQGLESGSMHCDQTDCRDGSRHTEQADSGPTQPKRQRLDEGQPL
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(96243..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,107301..107492,110630..110797,113513..113863,115071..115594,115955..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133121..133236,140661..140922))
location: region:96243-140922:-1
so has part: feature:140661-140922:-1:exon
so has part: feature:133121-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115955-116113:-1:exon
so has part: feature:115071-115594:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:110630-110797:-1:exon
so has part: feature:107301-107492:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:96243-96479:-1:exon

XP_032869292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140661-140922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133121-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115955-116113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115071-115594:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110630-110797:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107301-107492:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:96243-96479:-1:exon

trim28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: trim28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription intermediary factor 1-beta isoform X3
translation: MEAAVVLECGVGGDPGPERGVDGPLVGPEADADALRLVEPDPGLLERCGVCRGRLRERQPRLLPCLHSVCKGCLHGGVDASGSPQADGLICCPVCRQQCYIRDIIENYFLRDTGELDPGSNKKVSQVCTCCEDNAVSSSFCVECAEWLCDACVEAHQRVKFTKDHTLSKKNPGFTVDGRTNCERPIFCSIHRQETLKLFCETCDTLTCRDCQLLTHKDHRYQFLEEAIKNQKMTLENLVKKLTEKKTQLQVTTKQVRTRLRDVQDMQKKVQVEIKMAILQIMRELNKRGKTLIQRVERLAEEQQLKLEQQHLSMSKLYRQMDHVLKFASWAVSTDNSTALLLCKKLIFYQLQRGLQSKVNTEELKNDIITFLWDSAFWTKNAANFGNVMIEVPSTLSAHISVQHPSMSVHCPLPIAQHQPAPQHQSSHCPQPVAQHQSAPQHQPAPHHQPAPHHQPAPHHQPAPQHQPAPQHQSAPHHQPAPQHQSAPHHQPAPHHQPAPHHQPAPHHQSAPQHQSAPHHQSAPHHQSAPQYQSSHCPQPVAQHQSAPQYQSSHCSQTLAQHQSNNRMIAQQGNSWQNHVPMQPPHRLPPPNYQQTALPPPRQPPPPQSTQQAIIRQPHTAASWPPVNSLSRMQQAVQLVKPTSTMTSANGRYLQQMQVQVVQQGSILPMQQQQQQQQQQQQLMGQVLLLPQMNGIQVRQPQGHTQGAAKQSISGGQTATLYQQMSMHQPTVVSKLPSPTPRQQLSFGPSTAGGVQSPPVQQISTSTGLSNTPGSRPSPPVQQALRSNTTTSRQLLTTAAPQHAYSNIPAAGHSTPVGAHCHRSPTSSHRLGNSPVDQLKMLVQQATSYPRVILPHRDGPATAHHFAQEQYFCAGPPLVPQQVGIDDSLLYSLILTSNGTSPWSEAGAEGCVKGQPTCHVPRAFTEPRRGVPFKLSNASSTTEQEGQGNPIKQLQEASESGCNPLQCTLEHAGGSSDLNVKPKLNMKVPYVRLERLQIDLSTDTELPTFKLLPGSGQDEFSLIIIEGEGLPLNPPITAPTLESTLTPPNSVSPASVTEIEFVFNERTEVTSKRSHHALSPTPSPSEKSPGSIPDLKASPLCSVSEKGEEQDEVLCVVCGKGGELSCCSHCLKVFHVGCHVPALLSMPSVEWTCSLCVDLATSEVQSESSSTLANIGNATKDGLGAVDQQKCERLLLLLLSHKMCQAFHNPSGASQLKRQPLDLSSLRAKLEKTSTPHYSSPDEFVLEARLLFKTFELSQEKKEVAESVLMLESFFEEKLADVFNGKTFGSRAAKQGLESGSMHCDQTDCRDGSRHTEQADSGPTQPKRQRLDEGQPL
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(96243..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,107301..107492,110630..110797,113513..113863,115071..115531,115640..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133121..133236,140661..140922))
location: region:96243-140922:-1
so has part: feature:140661-140922:-1:exon
so has part: feature:133121-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115640-116113:-1:exon
so has part: feature:115071-115531:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:110630-110797:-1:exon
so has part: feature:107301-107492:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:96243-96479:-1:exon

XP_032869287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140661-140922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133121-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115640-116113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115071-115531:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110630-110797:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107301-107492:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:96243-96479:-1:exon

trim28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: trim28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription intermediary factor 1-beta isoform X9
translation: MEAAVVLECGVGGDPGPERGVDGPLVGPEADADALRLVEPDPGLLERCGVCRGRLRERQPRLLPCLHSVCKGCLHGGVDASGSPQADGLICCPVCRQQCYIRDIIENYFLRDTGELDPGSNKKVSQVCTCCEDNAVSSSFCVECAEWLCDACVEAHQRVKFTKDHTLSKKNPGFTVDGRTNCERPIFCSIHRQETLKLFCETCDTLTCRDCQLLTHKDHRYQFLEEAIKNQKMTLENLVKKLTEKKTQLQVTTKQVRTRLRDVQDMQKKVQVEIKMAILQIMRELNKRGKTLIQRVERLAEEQQLKLEQQHLSMSKLYRQMDHVLKFASWAVSTDNSTALLLCKKLIFYQLQRGLQSKVNTEELKNDIITFLWDSAFWTKNAANFGNVMIEVPSTLSAHISVQHPSMSVHCPLPIAQHQPAPQHQSSHCPQPVAQHQSAPQHQPAPHHQPAPHHQPAPHHQPAPQHQPAPQHQSAPHHQPAPQHQSAPHHQPAPHHQPAPHHQPAPHHQSAPQHQSAPHHQSAPHHQSAPQYQSSHCPQPVAQHQSASQHQSAPQHQSSPHHQSAPQYQSSQCPQPVAQHQSAPQYQSSHCSQTLAQHQSNNRMIAQQGNSWQNHVPMQPPHRLPPPNYQQTALPPPRQPPPPQSTQQAIIRQPHTAASWPPVNSLSRMQQAVQLVKPTSTMTSANGRYLQQMQVQVVQQGSILPMQQQQQQQQQQQQLMGQVLLLPQMNGIQVRQPQGHTQGAAKQSISGGQTATLYQQMSMHQPTVVSKLPSPTPRQQLSFGPSTAGGVQSPPVQQISTSTGLSNTPGSRPSPPVQQALRSNTTTSRQLLTTAAPQHAYSNIPAAGHSLSNASSTTEQEGQGNPIKQLQEASESGCNPLQCTLEHAGGSSDLNVKPKLNMKVPYVRLERLQIDLSTDTELPTFKLLPGSGQDEFSLIIIEGEGLPLNPPITAPTLESTLTPPNSVSPASVTEIEFVFNERTEVTSKRSHHALSPTPSPSEKSPGSIPDLKASPLCSVSEKGEEQDEVLCVVCGKGGELSCCSHCLKVFHVGCHVPALLSMPSVEWTCSLCVDLATSEVQSESSSTLANIGNATKDGLGAVDQQKCERLLLLLLSHKMCQAFHNPSGASQLKRQPLDLSSLRAKLEKTSTPHYSSPDEFVLEARLLFKTFELSQEKKEVAESVLMLESFFEEKLADVFNGKTFGSRAAKQGLESGSMHCDQTDCRDGSRHTEQADSGPTQPKRQRLDEGQPL
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(96243..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,113513..113863,115071..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133121..133236,140661..140922))
location: region:96243-140922:-1
so has part: feature:140661-140922:-1:exon
so has part: feature:133121-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115071-116113:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:96243-96479:-1:exon

XP_032869293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140661-140922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133121-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115071-116113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:96243-96479:-1:exon

trim28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: trim28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription intermediary factor 1-beta isoform X4
translation: MEAAVVLECGVGGDPGPERGVDGPLVGPEADADALRLVEPDPGLLERCGVCRGRLRERQPRLLPCLHSVCKGCLHGGVDASGSPQADGLICCPVCRQQCYIRDIIENYFLRDTGELDPGSNKKVSQVCTCCEDNAVSSSFCVECAEWLCDACVEAHQRVKFTKDHTLSKKNPGFTVDGRTNCERPIFCSIHRQETLKLFCETCDTLTCRDCQLLTHKDHRYQFLEEAIKNQKMTLENLVKKLTEKKTQLQVTTKQVRTRLRDVQDMQKKVQVEIKMAILQIMRELNKRGKTLIQRVERLAEEQQLKLEQQHLSMSKLYRQMDHVLKFASWAVSTDNSTALLLCKKLIFYQLQRGLQSKVNTEELKNDIITFLWDSAFWTKNAANFGNVMIEVPSTLSAHISVQHPSMSVHCPLPIAQHQPAPQHQSSHCPQPVAQHQSAPQHQPAPHHQPAPHHQPAPHHQPAPQHQPAPQHQSAPHHQPAPQHQSAPHHQPAPHHQPAPHHQPAPHHQSAPQHQSAPHHQSAPHHQSAPQYQSSHCPQPVAQHQSASQHQSAPQHQSSPHHQSAPQYQSSQCPQPVAQHQSAPQYQSSHCSQTLAQHQSNNRMIAQQGNSWQNHVPMQPPHRLPPPNYQQTALPPPRQPPPPQSTQQAIIRQPHTAASWPPVNSLSRMQQAVQLVKPTSTMTSANGRYLQQMQVQVVQQGSILPMQQQQQQQQQQQQLMGQVLLLPQMNGIQVRQPQGHTQGAAKQSISGGQTATLYQQMSMHQPTVVSKLPSPTPRQQLSFGPSTAGGVQSPPVQQISTSTGLSNTPGSRPSPPVQQALRSNTTTSRQLLTTAAPQHAYSNIPAAGHSYFCAGPPLVPQQVGIDDSLLYSLILTSNGTSPWSEAGAEGCVKGQPTCHVPRAFTEPRRGVPFKLSNASSTTEQEGQGNPIKQLQEASESGCNPLQCTLEHAGGSSDLNVKPKLNMKVPYVRLERLQIDLSTDTELPTFKLLPGSGQDEFSLIIIEGEGLPLNPPITAPTLESTLTPPNSVSPASVTEIEFVFNERTEVTSKRSHHALSPTPSPSEKSPGSIPDLKASPLCSVSEKGEEQDEVLCVVCGKGGELSCCSHCLKVFHVGCHVPALLSMPSVEWTCSLCVDLATSEVQSESSSTLANIGNATKDGLGAVDQQKCERLLLLLLSHKMCQAFHNPSGASQLKRQPLDLSSLRAKLEKTSTPHYSSPDEFVLEARLLFKTFELSQEKKEVAESVLMLESFFEEKLADVFNGKTFGSRAAKQGLESGSMHCDQTDCRDGSRHTEQADSGPTQPKRQRLDEGQPL
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(96243..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,107301..107492,113513..113863,115071..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133121..133236,140661..140922))
location: region:96243-140922:-1
so has part: feature:140661-140922:-1:exon
so has part: feature:133121-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115071-116113:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:107301-107492:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:96243-96479:-1:exon

XP_032869288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140661-140922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133121-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115071-116113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107301-107492:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:96243-96479:-1:exon

trim28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: trim28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription intermediary factor 1-beta isoform X6
translation: MEAAVVLECGVGGDPGPERGVDGPLVGPEADADALRLVEPDPGLLERCGVCRGRLRERQPRLLPCLHSVCKGCLHGGVDASGSPQADGLICCPVCRQQCYIRDIIENYFLRDTGELDPGSNKKVSQVCTCCEDNAVSSSFCVECAEWLCDACVEAHQRVKFTKDHTLSKKNPGFTVDGRTNCERPIFCSIHRQETLKLFCETCDTLTCRDCQLLTHKDHRYQFLEEAIKNQKMTLENLVKKLTEKKTQLQVTTKQVRTRLRDVQDMQKKVQVEIKMAILQIMRELNKRGKTLIQRVERLAEEQQLKLEQQHLSMSKLYRQMDHVLKFASWAVSTDNSTALLLCKKLIFYQLQRGLQSKVNTEELKNDIITFLWDSAFWTKNAANFGNVMIEVPSTLSAHISVQHPSMSVHCPLPIAQHQPAPQHQSSHCPQPVAQHQSAPQHQPAPHHQPAPHHQPAPHHQPAPQHQPAPQHQSAPHHQPAPQHQSAPHHQPAPHHQPAPHHQPAPHHQSAPQHQSAPHHQSAPHHQSAPQYQSSHCPQPVAQHQSASQHQSAPQHQSSPHHQSAPQYQSSQCPQPVAQHQSAPQYQSSHCSQTLAQHQSNNRMIAQQGNSWQNHVPMQPPHRLPPPNYQQTALPPPRQPPPPQSTQQAIIRQPHTAASWPPVNSLSRMQQAVQLVKPTSTMTSANGRYLQQMQVQVVQQGSILPMQQQQQQQQQQQQLMGQVLLLPQMNGIQVRQPQGHTQGAAKQSISGGQTATLYQQMSMHQPTVVSKLPSPTPRQQLSFGPSTAGGVQSPPVQQISTSTGLSNTPGSRPSPPVQQALRSNTTTSRQLLTTAAPQHAYSNIPAAGHSTPVGAHCHRSPTSSHRLGNSPVDQLKMLVQQATSYPRVILPHRDGPATAHHFAQEQLSNASSTTEQEGQGNPIKQLQEASESGCNPLQCTLEHAGGSSDLNVKPKLNMKVPYVRLERLQIDLSTDTELPTFKLLPGSGQDEFSLIIIEGEGLPLNPPITAPTLESTLTPPNSVSPASVTEIEFVFNERTEVTSKRSHHALSPTPSPSEKSPGSIPDLKASPLCSVSEKGEEQDEVLCVVCGKGGELSCCSHCLKVFHVGCHVPALLSMPSVEWTCSLCVDLATSEVQSESSSTLANIGNATKDGLGAVDQQKCERLLLLLLSHKMCQAFHNPSGASQLKRQPLDLSSLRAKLEKTSTPHYSSPDEFVLEARLLFKTFELSQEKKEVAESVLMLESFFEEKLADVFNGKTFGSRAAKQGLESGSMHCDQTDCRDGSRHTEQADSGPTQPKRQRLDEGQPL
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(96243..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,110630..110797,113513..113863,115071..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133121..133236,140661..140922))
location: region:96243-140922:-1
so has part: feature:140661-140922:-1:exon
so has part: feature:133121-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115071-116113:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:110630-110797:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:96243-96479:-1:exon

XP_032869290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140661-140922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133121-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115071-116113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110630-110797:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:96243-96479:-1:exon

trim28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: trim28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription intermediary factor 1-beta isoform X1
translation: MEAAVVLECGVGGDPGPERGVDGPLVGPEADADALRLVEPDPGLLERCGVCRGRLRERQPRLLPCLHSVCKGCLHGGVDASGSPQADGLICCPVCRQQCYIRDIIENYFLRDTGELDPGSNKKVSQVCTCCEDNAVSSSFCVECAEWLCDACVEAHQRVKFTKDHTLSKKNPGFTVDGRTNCERPIFCSIHRQETLKLFCETCDTLTCRDCQLLTHKDHRYQFLEEAIKNQKMTLENLVKKLTEKKTQLQVTTKQVRTRLRDVQDMQKKVQVEIKMAILQIMRELNKRGKTLIQRVERLAEEQQLKLEQQHLSMSKLYRQMDHVLKFASWAVSTDNSTALLLCKKLIFYQLQRGLQSKVNTEELKNDIITFLWDSAFWTKNAANFGNVMIEVPSTLSAHISVQHPSMSVHCPLPIAQHQPAPQHQSSHCPQPVAQHQSAPQHQPAPHHQPAPHHQPAPHHQPAPQHQPAPQHQSAPHHQPAPQHQSAPHHQPAPHHQPAPHHQPAPHHQSAPQHQSAPHHQSAPHHQSAPQYQSSHCPQPVAQHQSASQHQSAPQHQSSPHHQSAPQYQSSQCPQPVAQHQSAPQYQSSHCSQTLAQHQSNNRMIAQQGNSWQNHVPMQPPHRLPPPNYQQTALPPPRQPPPPQSTQQAIIRQPHTAASWPPVNSLSRMQQAVQLVKPTSTMTSANGRYLQQMQVQVVQQGSILPMQQQQQQQQQQQQLMGQVLLLPQMNGIQVRQPQGHTQGAAKQSISGGQTATLYQQMSMHQPTVVSKLPSPTPRQQLSFGPSTAGGVQSPPVQQISTSTGLSNTPGSRPSPPVQQALRSNTTTSRQLLTTAAPQHAYSNIPAAGHSTPVGAHCHRSPTSSHRLGNSPVDQLKMLVQQATSYPRVILPHRDGPATAHHFAQEQYFCAGPPLVPQQVGIDDSLLYSLILTSNGTSPWSEAGAEGCVKGQPTCHVPRAFTEPRRGVPFKLSNASSTTEQEGQGNPIKQLQEASESGCNPLQCTLEHAGGSSDLNVKPKLNMKVPYVRLERLQIDLSTDTELPTFKLLPGSGQDEFSLIIIEGEGLPLNPPITAPTLESTLTPPNSVSPASVTEIEFVFNERTEVTSKRSHHALSPTPSPSEKSPGSIPDLKASPLCSVSEKGEEQDEVLCVVCGKGGELSCCSHCLKVFHVGCHVPALLSMPSVEWTCSLCVDLATSEVQSESSSTLANIGNATKDGLGAVDQQKCERLLLLLLSHKMCQAFHNPSGASQLKRQPLDLSSLRAKLEKTSTPHYSSPDEFVLEARLLFKTFELSQEKKEVAESVLMLESFFEEKLADVFNGKTFGSRAAKQGLESGSMHCDQTDCRDGSRHTEQADSGPTQPKRQRLDEGQPL
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(96243..96479,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,107301..107492,110630..110797,113513..113863,115071..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133121..133236,140661..140922))
location: region:96243-140922:-1
so has part: feature:140661-140922:-1:exon
so has part: feature:133121-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115071-116113:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:110630-110797:-1:exon
so has part: feature:107301-107492:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:96243-96479:-1:exon

XP_032869285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140661-140922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133121-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115071-116113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110630-110797:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107301-107492:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:96243-96479:-1:exon

trim28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: trim28
product: tripartite motif containing 28, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033013400.1
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(98552..98676,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,107301..107492,110630..110797,113513..113863,115071..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133121..133236,140661..141026))
location: region:98552-141026:-1
so has part: feature:140661-141026:-1:exon
so has part: feature:133121-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115071-116113:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:110630-110797:-1:exon
so has part: feature:107301-107492:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:98552-98676:-1:exon

position:98552:-1
position: 98552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140661-141026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133121-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115071-116113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110630-110797:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107301-107492:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:98552-98676:-1:exon

position:98676:-1
position: 98676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

trim28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: trim28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription intermediary factor 1-beta isoform X7
translation: MEAAVVLECGVGGDPGPERGVDGPLVGPEADADALRLVEPDPGLLERCGVCRGRLRERQPRLLPCLHSVCKGCLHGGVDASGSPQADGLICCPVCRQQCYIRDIIENYFLRDTGELDPGSNKKVSQVCTCCEDNAVSSSFCVECAEWLCDACVEAHQRVKFTKDHTLSKKNPGFTVDGRTNCERPIFCSIHRQETLKLFCETCDTLTCRDCQLLTHKDHRYQFLEEAIKNQKMTLENLVKKLTEKKTQLQVTTKQVRTRLRDVQDMQKKVQVEIKMAILQIMRELNKRGKTLIQRVERLAEEQQLKLEQQHLSMSKLYRQMDHVLKFASWAVSTDNSTALLLCKKLIFYQLQRGLQSKVNTEELKNDIITFLWDSAFWTKNAANFGNVMIEVPSTLSAHISVQHPSMSVHCPLPIAQHQPAPQHQSSHCPQPVAQHQSAPQHQPAPHHQPAPHHQPAPHHQPAPQHQPAPQHQSAPHHQPAPQHQSAPHHQPAPHHQPAPHHQPAPHHQSAPQHQSAPHHQSAPHHQSAPQYQSSHCPQPVAQHQSASQHQSAPQHQSSPHHQSAPQYQSSQCPQPVAQHQSAPQYQSSHCSQTLAQHQSNNRMIAQQGNSWQNHVPMQPPHRLPPPNYQQTALPPPRQPPPPQSTQQAIIRQPHTAASWPPVNSLSRMQQAVQLVKPTSTMTSANGRYLQQMQVQVVQQGSILPMQQQQQQQQQQQQLMGQVLLLPQMNGIQVRQPQGHTQGAAKQSISGGQTATLYQQMSMHQPTVVSKLPSPTPRQQLSFGPSTAGGVQSPPVQQISTSTGLSNTPGSRPSPPVQQALRSNTTTSRQLLTTAAPQHAYSNIPAAGHSTPVGAHCHRSPTSSHRLGNSPVDQLKMLVQQATSYPRVILPHRDGPATAHHFAQEQYFCAGPPLVPQQVGIDDSLLYSLILTSNGTSPWSEAGAEGCVKGQPTCHVPRAFTEPRRGVPFKLSNASSTTEQEGQGNPIKQLQEASESGCNPLQCTLEHAGGSSDLNVKPKLNMKVPYVRLERLQIDLSTDTELPTFKLLPGSGQDEFSLIIIEGEGLPLNPPITAPTLESTLTPPNSVSPASVTEIEFVFNERTEVTSKRSHHALSPTPSPSEKSPGSIPDLKASPLCSVSEKGEEQDEVLCVVCGKGGELSCCSHCLKVFHVGCHVPALLSMPSVEWTCSLCVDLATSEVQSESSSTLANIGNATKDGLGAVDQQKCERLLLLLLSHKMCQAFHNPSGASQLKRQPLDLSSLRAKLEKTSTPHYSSPDEFVLEARLLFKTFELSQLLKV
SIO_010081: trim28
subclass of: SO_0000673
so part of: trim28
location: complement(join(98662..98676,98830..98961,99479..99556,100601..100724,101323..101654,102014..102200,102886..102934,106150..106222,107301..107492,110630..110797,113513..113863,115071..116113,117057..117174,117810..117956,118526..118640,125271..125387,128108..128240,130540..130687,133121..133236,140661..140922))
location: region:98662-140922:-1
so has part: feature:140661-140922:-1:exon
so has part: feature:133121-133236:-1:exon
so has part: feature:130540-130687:-1:exon
so has part: feature:128108-128240:-1:exon
so has part: feature:125271-125387:-1:exon
so has part: feature:118526-118640:-1:exon
so has part: feature:117810-117956:-1:exon
so has part: feature:117057-117174:-1:exon
so has part: feature:115071-116113:-1:exon
so has part: feature:113513-113863:-1:exon
so has part: feature:110630-110797:-1:exon
so has part: feature:107301-107492:-1:exon
so has part: feature:106150-106222:-1:exon
so has part: feature:102886-102934:-1:exon
so has part: feature:102014-102200:-1:exon
so has part: feature:101323-101654:-1:exon
so has part: feature:100601-100724:-1:exon
so has part: feature:99479-99556:-1:exon
so has part: feature:98830-98961:-1:exon
so has part: feature:98662-98676:-1:exon

XP_032869291.1
type: Protein
SIO_000068: ncbiprotein

position:98662:-1
position: 98662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140661-140922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133121-133236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130540-130687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128108-128240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125271-125387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118526-118640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117810-117956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:117057-117174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115071-116113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113513-113863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110630-110797:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107301-107492:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106150-106222:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102886-102934:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102014-102200:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:101323-101654:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:100601-100724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:99479-99556:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:98830-98961:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:98662-98676:-1:exon

LOC116966842
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(143584..151501)
location: region:143584-151501:-1
so has part: feature:143584-151501:-1:exon
subclass of: SO_0000010

116966842
type: Gene
SIO_000068: ncbigene

position:143584:-1
position: 143584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151501:-1
position: 151501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143584-151501:-1:exon

LOC116966842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966842
product: uncharacterized LOC116966842, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033013182.1
SIO_010081: LOC116966842
subclass of: SO_0000673
so part of: LOC116966842
location: complement(join(143584..143684,144548..144688,145816..145896,147492..147754,148641..148866,150071..150204,151008..151501))
location: region:143584-151501:-1
so has part: feature:151008-151501:-1:exon
so has part: feature:150071-150204:-1:exon
so has part: feature:148641-148866:-1:exon
so has part: feature:147492-147754:-1:exon
so has part: feature:145816-145896:-1:exon
so has part: feature:144548-144688:-1:exon
so has part: feature:143584-143684:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151008-151501:-1:exon

position:151008:-1
position: 151008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:150071-150204:-1:exon

position:150071:-1
position: 150071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150204:-1
position: 150204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148641-148866:-1:exon

position:148641:-1
position: 148641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148866:-1
position: 148866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147492-147754:-1:exon

position:147492:-1
position: 147492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147754:-1
position: 147754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:145816-145896:-1:exon

position:145816:-1
position: 145816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145896:-1
position: 145896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:144548-144688:-1:exon

position:144548:-1
position: 144548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144688:-1
position: 144688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:143584-143684:-1:exon

position:143684:-1
position: 143684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116966842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966842
product: uncharacterized LOC116966842, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033013183.1
SIO_010081: LOC116966842
subclass of: SO_0000673
so part of: LOC116966842
location: complement(join(143584..143684,144548..144688,145816..145896,147492..147754,148641..148866,150071..150292))
location: region:143584-150292:-1
so has part: feature:150071-150292:-1:exon
so has part: feature:148641-148866:-1:exon
so has part: feature:147492-147754:-1:exon
so has part: feature:145816-145896:-1:exon
so has part: feature:144548-144688:-1:exon
so has part: feature:143584-143684:-1:exon

position:150292:-1
position: 150292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150071-150292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148641-148866:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147492-147754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145816-145896:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144548-144688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143584-143684:-1:exon

LOC116966842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116966842
translation: MELLKPYLGLMAFFYLPTLFFDEEFSVSISSMIGIFSCGIRQVFAVTTKKAEVFLRQPRPGSSASRFKDVKKKSQRTFKKLIESPTQTPYFVCIPMYWGLLLITPLLPKCLKIPWVLHCSLDQFIVLFSWWRCYRNFHRRGLRDEETFDQTDNKYLLVEDFVWKQQLEEECFNLRQLTEMEITLYSIESPHIVHSYMDIEEGAERLIRARKAAVLQELREKLAKQMTKIQGLTKQCAQTVGQNQPSSFKP
SIO_010081: LOC116966842
subclass of: SO_0000673
so part of: LOC116966842
location: complement(join(143622..143684,144548..144688,145816..145896,147492..147754,148641..148845))
location: region:143622-148845:-1
so has part: feature:148641-148845:-1:exon
so has part: feature:147492-147754:-1:exon
so has part: feature:145816-145896:-1:exon
so has part: feature:144548-144688:-1:exon
so has part: feature:143622-143684:-1:exon

XP_032869073.1
type: Protein
SIO_000068: ncbiprotein

position:143622:-1
position: 143622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148845:-1
position: 148845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148641-148845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147492-147754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145816-145896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144548-144688:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143622-143684:-1:exon

LOC116966842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116966842
translation: MELLKPYLGLMAFFYLPTLFFDEEFSVSISSMIGIFSCGIRQVFAVTTKKAEVFLRQPRPGSSASRFKDVKKKSQRTFKKLIESPTQTPYFVCIPMYWGLLLITPLLPKCLKIPWVLHCSLDQFIVLFSWWRCYRNFHRRGLRDEETFDQTDNKYLLVEDFVWKQQLEEECFNLRQLTEMEITLYSIESPHIVHSYMDIEEGAERLIRARKAAVLQELREKLAKQMTKIQGLTKQCAQTVGQNQPSSFKP
SIO_010081: LOC116966842
subclass of: SO_0000673
so part of: LOC116966842
location: complement(join(143622..143684,144548..144688,145816..145896,147492..147754,148641..148845))
location: region:143622-148845:-1
so has part: feature:148641-148845:-1:exon
so has part: feature:147492-147754:-1:exon
so has part: feature:145816-145896:-1:exon
so has part: feature:144548-144688:-1:exon
so has part: feature:143622-143684:-1:exon

XP_032869074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148641-148845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147492-147754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145816-145896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144548-144688:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143622-143684:-1:exon

LOC116966773
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(152513..186481)
location: region:152513-186481:-1
so has part: feature:152513-186481:-1:exon
subclass of: SO_0000010

116966773
type: Gene
SIO_000068: ncbigene

position:152513:-1
position: 152513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186481:-1
position: 186481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152513-186481:-1:exon

LOC116966773
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966773
product: liprin-alpha-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033013113.1
SIO_010081: LOC116966773
subclass of: SO_0000673
so part of: LOC116966773
location: complement(join(152513..152633,153945..154016,154943..155111,155480..155548,155676..155851,156279..156376,156676..156851,157373..157399,158980..159084,173935..174099,174560..174661,180172..180607,186262..186481))
location: region:152513-186481:-1
so has part: feature:186262-186481:-1:exon
so has part: feature:180172-180607:-1:exon
so has part: feature:174560-174661:-1:exon
so has part: feature:173935-174099:-1:exon
so has part: feature:158980-159084:-1:exon
so has part: feature:157373-157399:-1:exon
so has part: feature:156676-156851:-1:exon
so has part: feature:156279-156376:-1:exon
so has part: feature:155676-155851:-1:exon
so has part: feature:155480-155548:-1:exon
so has part: feature:154943-155111:-1:exon
so has part: feature:153945-154016:-1:exon
so has part: feature:152513-152633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186262-186481:-1:exon

position:186262:-1
position: 186262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:180172-180607:-1:exon

position:180172:-1
position: 180172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180607:-1
position: 180607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:174560-174661:-1:exon

position:174560:-1
position: 174560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174661:-1
position: 174661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:173935-174099:-1:exon

position:173935:-1
position: 173935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174099:-1
position: 174099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:158980-159084:-1:exon

position:158980:-1
position: 158980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159084:-1
position: 159084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:157373-157399:-1:exon

position:157373:-1
position: 157373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157399:-1
position: 157399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:156676-156851:-1:exon

position:156676:-1
position: 156676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156851:-1
position: 156851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:156279-156376:-1:exon

position:156279:-1
position: 156279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156376:-1
position: 156376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:155676-155851:-1:exon

position:155676:-1
position: 155676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155851:-1
position: 155851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:155480-155548:-1:exon

position:155480:-1
position: 155480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155548:-1
position: 155548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:154943-155111:-1:exon

position:154943:-1
position: 154943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155111:-1
position: 155111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:153945-154016:-1:exon

position:153945:-1
position: 153945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154016:-1
position: 154016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:152513-152633:-1:exon

position:152633:-1
position: 152633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116966773
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liprin-alpha-3-like
translation: MMCEVMPTINEDNRRGSQYGADDGNFEQLMVNMLNERERLLESLRETQDSLSGAQLRLRQLGHEKESLQRQLSIALPQEFAVLTKELNLCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKSPPLSPRTPGPRDQNTSNVWVTHEEMESLTSATKTEAKEISWDQILAHGDMNHEWVGNEWLPSLGLPQYRSYFMESLVDARMLDHLTKKELRGQLKMVDSFHRISLHYGILCLKRLNYDKKELESKREGSLTLIKDVMAWTNDRMVVWVQAIGLKEFSGNLQESGVHGALIALDDTFDHNDIALLLQIPMQNTQARQMLESEFKNLLHQGTERRQEEGDAKNFNRAPSWRKRFRAKEMRDVTSDTSETLPANFRVTAAAIAAQSVQLRKVQTDNSASGTPRADTPSVRTYSC
SIO_010081: LOC116966773
subclass of: SO_0000673
so part of: LOC116966773
location: complement(join(153958..154016,154943..155111,155480..155548,155676..155851,156279..156376,156676..156851,157373..157399,158980..159084,173935..174099,174560..174661,180172..180405))
location: region:153958-180405:-1
so has part: feature:180172-180405:-1:exon
so has part: feature:174560-174661:-1:exon
so has part: feature:173935-174099:-1:exon
so has part: feature:158980-159084:-1:exon
so has part: feature:157373-157399:-1:exon
so has part: feature:156676-156851:-1:exon
so has part: feature:156279-156376:-1:exon
so has part: feature:155676-155851:-1:exon
so has part: feature:155480-155548:-1:exon
so has part: feature:154943-155111:-1:exon
so has part: feature:153958-154016:-1:exon

XP_032869004.1
type: Protein
SIO_000068: ncbiprotein

position:153958:-1
position: 153958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180405:-1
position: 180405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180172-180405:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174560-174661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:173935-174099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158980-159084:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157373-157399:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156676-156851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156279-156376:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155676-155851:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155480-155548:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154943-155111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:153958-154016:-1:exon

lin7b
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: lin7b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(203698..217668)
location: region:203698-217668:-1
so has part: feature:203698-217668:-1:exon
subclass of: SO_0000010

116966749
type: Gene
SIO_000068: ncbigene

position:203698:-1
position: 203698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217668:-1
position: 217668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203698-217668:-1:exon

lin7b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: lin7b
product: lin-7 homolog B, crumbs cell polarity complex component, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033013054.1
SIO_010081: lin7b
subclass of: SO_0000673
so part of: lin7b
location: complement(join(203698..205212,206712..206875,209443..209652,211488..211559,213451..213569,217597..217668))
location: region:203698-217668:-1
so has part: feature:217597-217668:-1:exon
so has part: feature:213451-213569:-1:exon
so has part: feature:211488-211559:-1:exon
so has part: feature:209443-209652:-1:exon
so has part: feature:206712-206875:-1:exon
so has part: feature:203698-205212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217597-217668:-1:exon

position:217597:-1
position: 217597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:213451-213569:-1:exon

position:213451:-1
position: 213451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213569:-1
position: 213569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:211488-211559:-1:exon

position:211488:-1
position: 211488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211559:-1
position: 211559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:209443-209652:-1:exon

position:209443:-1
position: 209443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209652:-1
position: 209652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:206712-206875:-1:exon

position:206712:-1
position: 206712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206875:-1
position: 206875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:203698-205212:-1:exon

position:205212:-1
position: 205212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lin7b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: lin7b
product: lin-7 homolog B, crumbs cell polarity complex component, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033013055.1
SIO_010081: lin7b
subclass of: SO_0000673
so part of: lin7b
location: complement(join(203698..205212,206684..206875,209443..209652,211488..211559,213451..213569,217597..217668))
location: region:203698-217668:-1
so has part: feature:217597-217668:-1:exon
so has part: feature:213451-213569:-1:exon
so has part: feature:211488-211559:-1:exon
so has part: feature:209443-209652:-1:exon
so has part: feature:206684-206875:-1:exon
so has part: feature:203698-205212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217597-217668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213451-213569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211488-211559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209443-209652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206684-206875:-1:exon

position:206684:-1
position: 206684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:203698-205212:-1:exon

lin7b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: lin7b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-7 homolog B isoform X1
translation: MAALAENLSLERDVARAIELLEKLQRSGNVPPQKLQTLQRVLQSKFCSAIREVYEQLYETLDISGSPEIRAHATAKATVAAFAASEGHAHPRVVELPKTDEGLGFNIMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGTVKLVVRYTPKVLEEMEARFEKMRTARRRQQHTSYSSLESRG
SIO_010081: lin7b
subclass of: SO_0000673
so part of: lin7b
location: complement(join(205191..205212,206712..206875,209443..209652,211488..211559,213451..213569,217597..217633))
location: region:205191-217633:-1
so has part: feature:217597-217633:-1:exon
so has part: feature:213451-213569:-1:exon
so has part: feature:211488-211559:-1:exon
so has part: feature:209443-209652:-1:exon
so has part: feature:206712-206875:-1:exon
so has part: feature:205191-205212:-1:exon

XP_032868945.1
type: Protein
SIO_000068: ncbiprotein

position:205191:-1
position: 205191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217633:-1
position: 217633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217597-217633:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213451-213569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211488-211559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209443-209652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206712-206875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205191-205212:-1:exon

lin7b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: lin7b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-7 homolog B isoform X2
translation: MAALAENLSLERDVARAIELLEKLQRSGNVPPQKLQTLQRVLQSKFCSAIREVYEQLYETLDISGSPEIRAHATAKATVAAFAASEGHAHPRVVELPKTDEGLGFNIMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGTVKLVVRYTPKVLEEMEARFEKMRTARRRQQHTSYS
SIO_010081: lin7b
subclass of: SO_0000673
so part of: lin7b
location: complement(join(206708..206875,209443..209652,211488..211559,213451..213569,217597..217633))
location: region:206708-217633:-1
so has part: feature:217597-217633:-1:exon
so has part: feature:213451-213569:-1:exon
so has part: feature:211488-211559:-1:exon
so has part: feature:209443-209652:-1:exon
so has part: feature:206708-206875:-1:exon

XP_032868946.1
type: Protein
SIO_000068: ncbiprotein

position:206708:-1
position: 206708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217597-217633:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213451-213569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211488-211559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209443-209652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206708-206875:-1:exon

ntf4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ntf4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(220052..259429)
location: region:220052-259429:-1
so has part: feature:220052-259429:-1:exon
subclass of: SO_0000010

116966862
type: Gene
SIO_000068: ncbigene

position:220052:-1
position: 220052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259429:-1
position: 259429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220052-259429:-1:exon

ntf4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ntf4
product: neurotrophin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033013197.1
SIO_010081: ntf4
subclass of: SO_0000673
so part of: ntf4
location: complement(join(220052..220935,248608..248732,259385..259429))
location: region:220052-259429:-1
so has part: feature:259385-259429:-1:exon
so has part: feature:248608-248732:-1:exon
so has part: feature:220052-220935:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259385-259429:-1:exon

position:259385:-1
position: 259385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:248608-248732:-1:exon

position:248608:-1
position: 248608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248732:-1
position: 248732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:220052-220935:-1:exon

position:220935:-1
position: 220935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ntf4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ntf4
product: neurotrophin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033013198.1
SIO_010081: ntf4
subclass of: SO_0000673
so part of: ntf4
location: complement(join(220052..220935,240368..240752))
location: region:220052-240752:-1
so has part: feature:240368-240752:-1:exon
so has part: feature:220052-220935:-1:exon

position:240752:-1
position: 240752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240368-240752:-1:exon

position:240368:-1
position: 240368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220052-220935:-1:exon

ntf4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ntf4
product: neurotrophin 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033013199.1
SIO_010081: ntf4
subclass of: SO_0000673
so part of: ntf4
location: complement(join(220052..220935,239605..240019))
location: region:220052-240019:-1
so has part: feature:239605-240019:-1:exon
so has part: feature:220052-220935:-1:exon

position:240019:-1
position: 240019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239605-240019:-1:exon

position:239605:-1
position: 239605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220052-220935:-1:exon

ntf4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ntf4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrophin-4 isoform X1
translation: MAEAADDVLRYRLWLPRNFKQQEGGGGMCTKGQPGRRGMIPLHYTMMALYLGQVRAAPVQLNGAERGGPGLEEGEADGDELVLDVAGLDSDAAVKEWDFYSPRVVLAPRPPGDPPLLFIMEESLGQSAVANRTARARRQSGPAGVDPSRRGDLSVCDSSSQWVTDRRVAVDVLGKVVTILTDVPTSTGPLKQYFYETKCNERSSTAQGGCRGVDKRHWISECKTKQSYVRALTVDALKRTGWRWIRIDTSCVCTLINRTGRQ
SIO_010081: ntf4
subclass of: SO_0000673
so part of: ntf4
location: complement(join(220241..220935,248608..248701))
location: region:220241-248701:-1
so has part: feature:248608-248701:-1:exon
so has part: feature:220241-220935:-1:exon

XP_032869088.1
type: Protein
SIO_000068: ncbiprotein

position:220241:-1
position: 220241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248701:-1
position: 248701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248608-248701:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220241-220935:-1:exon

ntf4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ntf4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrophin-4 isoform X2
translation: MIPLHYTMMALYLGQVRAAPVQLNGAERGGPGLEEGEADGDELVLDVAGLDSDAAVKEWDFYSPRVVLAPRPPGDPPLLFIMEESLGQSAVANRTARARRQSGPAGVDPSRRGDLSVCDSSSQWVTDRRVAVDVLGKVVTILTDVPTSTGPLKQYFYETKCNERSSTAQGGCRGVDKRHWISECKTKQSYVRALTVDALKRTGWRWIRIDTSCVCTLINRTGRQ
SIO_010081: ntf4
subclass of: SO_0000673
so part of: ntf4
location: complement(220241..220915)
location: region:220241-220915:-1
so has part: feature:220241-220915:-1:exon

XP_032869089.1
type: Protein
SIO_000068: ncbiprotein

position:220915:-1
position: 220915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220241-220915:-1:exon

ntf4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ntf4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurotrophin-4 isoform X2
translation: MIPLHYTMMALYLGQVRAAPVQLNGAERGGPGLEEGEADGDELVLDVAGLDSDAAVKEWDFYSPRVVLAPRPPGDPPLLFIMEESLGQSAVANRTARARRQSGPAGVDPSRRGDLSVCDSSSQWVTDRRVAVDVLGKVVTILTDVPTSTGPLKQYFYETKCNERSSTAQGGCRGVDKRHWISECKTKQSYVRALTVDALKRTGWRWIRIDTSCVCTLINRTGRQ
SIO_010081: ntf4
subclass of: SO_0000673
so part of: ntf4
location: complement(220241..220915)
location: region:220241-220915:-1
so has part: feature:220241-220915:-1:exon

XP_032869090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220241-220915:-1:exon

LOC116967041
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116967041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(278307..337558)
location: region:278307-337558:-1
so has part: feature:278307-337558:-1:exon
subclass of: SO_0000010

116967041
type: Gene
SIO_000068: ncbigene

position:278307:-1
position: 278307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337558:-1
position: 337558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278307-337558:-1:exon

LOC116967041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116967041
product: kinesin-like protein KIF18A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033013491.1
SIO_010081: LOC116967041
subclass of: SO_0000673
so part of: LOC116967041
location: complement(join(278307..281640,284349..284425,287499..287636,288756..289338,299503..299750,305436..305557,306126..306290,308580..308742,318749..318855,323457..323531,324584..324760,325413..325610,326651..326761,328084..328188,330092..330249,333952..334322,337395..337558))
location: region:278307-337558:-1
so has part: feature:337395-337558:-1:exon
so has part: feature:333952-334322:-1:exon
so has part: feature:330092-330249:-1:exon
so has part: feature:328084-328188:-1:exon
so has part: feature:326651-326761:-1:exon
so has part: feature:325413-325610:-1:exon
so has part: feature:324584-324760:-1:exon
so has part: feature:323457-323531:-1:exon
so has part: feature:318749-318855:-1:exon
so has part: feature:308580-308742:-1:exon
so has part: feature:306126-306290:-1:exon
so has part: feature:305436-305557:-1:exon
so has part: feature:299503-299750:-1:exon
so has part: feature:288756-289338:-1:exon
so has part: feature:287499-287636:-1:exon
so has part: feature:284349-284425:-1:exon
so has part: feature:278307-281640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337395-337558:-1:exon

position:337395:-1
position: 337395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333952-334322:-1:exon

position:333952:-1
position: 333952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334322:-1
position: 334322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:330092-330249:-1:exon

position:330092:-1
position: 330092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330249:-1
position: 330249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:328084-328188:-1:exon

position:328084:-1
position: 328084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328188:-1
position: 328188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:326651-326761:-1:exon

position:326651:-1
position: 326651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326761:-1
position: 326761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:325413-325610:-1:exon

position:325413:-1
position: 325413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325610:-1
position: 325610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:324584-324760:-1:exon

position:324584:-1
position: 324584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324760:-1
position: 324760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:323457-323531:-1:exon

position:323457:-1
position: 323457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323531:-1
position: 323531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:318749-318855:-1:exon

position:318749:-1
position: 318749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318855:-1
position: 318855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:308580-308742:-1:exon

position:308580:-1
position: 308580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308742:-1
position: 308742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:306126-306290:-1:exon

position:306126:-1
position: 306126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306290:-1
position: 306290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:305436-305557:-1:exon

position:305436:-1
position: 305436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305557:-1
position: 305557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:299503-299750:-1:exon

position:299503:-1
position: 299503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299750:-1
position: 299750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:288756-289338:-1:exon

position:288756:-1
position: 288756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289338:-1
position: 289338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:287499-287636:-1:exon

position:287499:-1
position: 287499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287636:-1
position: 287636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:284349-284425:-1:exon

position:284349:-1
position: 284349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284425:-1
position: 284425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:278307-281640:-1:exon

position:281640:-1
position: 281640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116967041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116967041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF18A
translation: MPQEEEGNVTVVVRIRPQNHRELETESHAVTQMVDENVLVFDPKEEINDMFSGAKFRDRGITCRKRKDLKFVFDRVFNENSTQQELFEFTTKQILEGVLNGYNCSVFAYGATGSGKTHTMLGSVDQPGVMYLTMQQLYERIEQMKDEKICEVAVSYLEVYNEQIQDLLEPKGSLAVREDPQKGTVVQRLSFHQPKTAKELLEMLASGNQNRTQHPTDANAASSRSHAVFQVYVKQQDRIASISKNLRVAKMCLIDLAGSERVTSTKAQGARFREGANINRSLLALGNVINALADGKGKKSHIPYRDSKLTRLLKDSLGGNCRTVMIATVSPSASSYEDTYNTLKYANRAKDIKSSLKSNIVSLDCHISKYAAICEELRREVTQLKDKLKAYEEGKCAITRSGPSTVQTVLASQQQGLEKSLQGAFVSRQEIQRDYLELEAHAKEMELKAFFRLRDQERIKILCTEQQLEQASCKFERSQASSSRRHEHLLEKMRQNEERLKENGRLISQLGTKVGSDGKTTMFPQIMKLSMQKLLLEAEVSNCKQHSNSMTRLLTLQDRDSQQTEKLVTSLLQIAQKQFNTLKEANLATADMASQFNDLERLVRGEKVVLWADQINAEESKENQHSEVTALATLSKLHQLPENLFEVTVPSIKKAAAAEPTEPALSEVSAKKRLPTKRCLAELRPSSSLQQKEQLMPLKRRRTEIEVPADNNTVTDLRRKHSSSRIDHVNFVAKTYRKDSQPFSNRSNTLANEGSKFVNMAPHIKRICTPAVSKKRKAPSSTIPNSSILPAVSSNSILNETFETAEGCDQDATIILGPSADQRLADTLNHTTMSQTNNSFLQRLDLPRFAVKNQPSVLYTAKNPYATVSRSVTRTNTRVTGQRKKRYSSGFSASGRQYQGKSRRSPACKTRLTSAQYSSPMLRSLDKKNGIGGSLPGSQSFQFLSQTSLKNSSKMLSF
SIO_010081: LOC116967041
subclass of: SO_0000673
so part of: LOC116967041
location: complement(join(281507..281640,284349..284425,287499..287636,288756..289338,299503..299750,305436..305557,306126..306290,308580..308742,318749..318855,323457..323531,324584..324760,325413..325610,326651..326761,328084..328188,330092..330249,333952..334267))
location: region:281507-334267:-1
so has part: feature:333952-334267:-1:exon
so has part: feature:330092-330249:-1:exon
so has part: feature:328084-328188:-1:exon
so has part: feature:326651-326761:-1:exon
so has part: feature:325413-325610:-1:exon
so has part: feature:324584-324760:-1:exon
so has part: feature:323457-323531:-1:exon
so has part: feature:318749-318855:-1:exon
so has part: feature:308580-308742:-1:exon
so has part: feature:306126-306290:-1:exon
so has part: feature:305436-305557:-1:exon
so has part: feature:299503-299750:-1:exon
so has part: feature:288756-289338:-1:exon
so has part: feature:287499-287636:-1:exon
so has part: feature:284349-284425:-1:exon
so has part: feature:281507-281640:-1:exon

XP_032869382.1
type: Protein
SIO_000068: ncbiprotein

position:281507:-1
position: 281507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334267:-1
position: 334267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333952-334267:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330092-330249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328084-328188:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326651-326761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325413-325610:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:324584-324760:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:323457-323531:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:318749-318855:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:308580-308742:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:306126-306290:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305436-305557:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:299503-299750:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288756-289338:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287499-287636:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:284349-284425:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:281507-281640:-1:exon

LOC116966931
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(430744..433047)
location: region:430744-433047:-1
so has part: feature:430744-433047:-1:exon
subclass of: SO_0000010

116966931
type: Gene
SIO_000068: ncbigene

position:430744:-1
position: 430744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433047:-1
position: 433047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430744-433047:-1:exon

LOC116966931
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966931
product: potassium voltage-gated channel subfamily A member 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 116 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033013311.1
SIO_010081: LOC116966931
subclass of: SO_0000673
so part of: LOC116966931
location: complement(430744..433047)
location: region:430744-433047:-1
so has part: feature:430744-433047:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430744-433047:-1:exon

LOC116966931
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily A member 1-like
translation: MDKPLCLYDKDLESSDHHDCCERVIINVSGLRFETQIKTLRQFPDTLLGDPQRRTRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLKRPNSVSLEVFMEELRFYELGDEAVTRFREDEGFVKEEERLLPNNEFQRQLWLLFEYPESSSPAKVVAIISVLVILISIVVFCLETLPEFRDDHDPTLPVHSQKGNSSLAEVASNPFSDPFFVVETMCICWFSFELFLRFIVCPSKPGFFKNIMNFIDFVAIIPYFVALGTEFARQRGVAQPAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAESEDEDTIFTSIPEAFWWAVVTMTTVGYGDMYPVTLGGKIVGSLCAIAGVLTISLPVPVIVSNFSYFYHREIESEEQTQYSHVTTCPYLPPSPKAQSLTGKSLELEDELVDSFCAPLHTDMLDGFCPTDSGHRPSDNSPIKNSVVTQV
SIO_010081: LOC116966931
subclass of: SO_0000673
so part of: LOC116966931
location: complement(431159..432601)
location: region:431159-432601:-1
so has part: feature:431159-432601:-1:exon

XP_032869202.1
type: Protein
SIO_000068: ncbiprotein

position:431159:-1
position: 431159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432601:-1
position: 432601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431159-432601:-1:exon

LOC116966772
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966772
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 453857..491753
location: region:453857-491753:1
so has part: feature:453857-491753:1:exon
subclass of: SO_0000010

116966772
type: Gene
SIO_000068: ncbigene

position:453857:1
position: 453857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491753:1
position: 491753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453857-491753:1:exon

LOC116966772
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966772
product: synaptotagmin-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033013111.1
SIO_010081: LOC116966772
subclass of: SO_0000673
so part of: LOC116966772
location: join(453857..454151,479824..480033,481518..481532,483078..483259,484019..484132,485351..485518,488114..488281,489517..489634,490343..490476,491124..491753)
location: region:453857-491753:1
so has part: feature:453857-454151:1:exon
so has part: feature:479824-480033:1:exon
so has part: feature:481518-481532:1:exon
so has part: feature:483078-483259:1:exon
so has part: feature:484019-484132:1:exon
so has part: feature:485351-485518:1:exon
so has part: feature:488114-488281:1:exon
so has part: feature:489517-489634:1:exon
so has part: feature:490343-490476:1:exon
so has part: feature:491124-491753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453857-454151:1:exon

position:454151:1
position: 454151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:479824-480033:1:exon

position:479824:1
position: 479824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480033:1
position: 480033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:481518-481532:1:exon

position:481518:1
position: 481518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481532:1
position: 481532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:483078-483259:1:exon

position:483078:1
position: 483078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483259:1
position: 483259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:484019-484132:1:exon

position:484019:1
position: 484019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484132:1
position: 484132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:485351-485518:1:exon

position:485351:1
position: 485351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485518:1
position: 485518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:488114-488281:1:exon

position:488114:1
position: 488114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488281:1
position: 488281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:489517-489634:1:exon

position:489517:1
position: 489517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489634:1
position: 489634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:490343-490476:1:exon

position:490343:1
position: 490343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490476:1
position: 490476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:491124-491753:1:exon

position:491124:1
position: 491124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116966772
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966772
product: synaptotagmin-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033013112.1
SIO_010081: LOC116966772
subclass of: SO_0000673
so part of: LOC116966772
location: join(453859..454151,479824..480033,483078..483259,484019..484132,485351..485518,488114..488281,489517..489634,490343..490476,491124..491753)
location: region:453859-491753:1
so has part: feature:453859-454151:1:exon
so has part: feature:479824-480033:1:exon
so has part: feature:483078-483259:1:exon
so has part: feature:484019-484132:1:exon
so has part: feature:485351-485518:1:exon
so has part: feature:488114-488281:1:exon
so has part: feature:489517-489634:1:exon
so has part: feature:490343-490476:1:exon
so has part: feature:491124-491753:1:exon

position:453859:1
position: 453859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453859-454151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479824-480033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483078-483259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:484019-484132:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485351-485518:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:488114-488281:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:489517-489634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:490343-490476:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:491124-491753:1:exon

LOC116966772
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966772
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-1-like isoform X1
translation: MNAARREAVMVSTVTSPEREAGHNATNTPSRQDVFSHMKNKFMNELGKIPMHARKLPPWALAAIIIVLCLLLLCCCLCICKKCCTKKKKQKKGKDKGKAQINMKEVKGMGKSIIDKVQPDVEDLDPSLLGDEKREEEKLGKLQYSLDYDFQSGQLIVGIIQAADLAALDIGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPTFSESFTFKIPYSELGGKVLVMAVYDFDRFSKHDAIGEIRIPMSSIDLAHVIEEWRDLESAEKEEQEKLGDICFSLRYVPTAGKLTVIVLEAKNLKKMDVGGLSDPYVKIHLMQNARRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVITVLDYDKLGKNEAIGKCFVGYNGTGMGLRHWSDMLANPRRPIAQWHTLQPEEEVDIALGIKTS
SIO_010081: LOC116966772
subclass of: SO_0000673
so part of: LOC116966772
location: join(479883..480033,481518..481532,483078..483259,484019..484132,485351..485518,488114..488281,489517..489634,490343..490476,491124..491333)
location: region:479883-491333:1
so has part: feature:479883-480033:1:exon
so has part: feature:481518-481532:1:exon
so has part: feature:483078-483259:1:exon
so has part: feature:484019-484132:1:exon
so has part: feature:485351-485518:1:exon
so has part: feature:488114-488281:1:exon
so has part: feature:489517-489634:1:exon
so has part: feature:490343-490476:1:exon
so has part: feature:491124-491333:1:exon

XP_032869002.1
type: Protein
SIO_000068: ncbiprotein

position:479883:1
position: 479883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491333:1
position: 491333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479883-480033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:481518-481532:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483078-483259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:484019-484132:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485351-485518:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:488114-488281:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:489517-489634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:490343-490476:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:491124-491333:1:exon

LOC116966772
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966772
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-1-like isoform X2
translation: MNAARREAVMVSTVTSPEREAGHNATNTPSRQDVFSHMKNKFMNELGKIPIPPWALAAIIIVLCLLLLCCCLCICKKCCTKKKKQKKGKDKGKAQINMKEVKGMGKSIIDKVQPDVEDLDPSLLGDEKREEEKLGKLQYSLDYDFQSGQLIVGIIQAADLAALDIGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPTFSESFTFKIPYSELGGKVLVMAVYDFDRFSKHDAIGEIRIPMSSIDLAHVIEEWRDLESAEKEEQEKLGDICFSLRYVPTAGKLTVIVLEAKNLKKMDVGGLSDPYVKIHLMQNARRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVITVLDYDKLGKNEAIGKCFVGYNGTGMGLRHWSDMLANPRRPIAQWHTLQPEEEVDIALGIKTS
SIO_010081: LOC116966772
subclass of: SO_0000673
so part of: LOC116966772
location: join(479883..480033,483078..483259,484019..484132,485351..485518,488114..488281,489517..489634,490343..490476,491124..491333)
location: region:479883-491333:1
so has part: feature:479883-480033:1:exon
so has part: feature:483078-483259:1:exon
so has part: feature:484019-484132:1:exon
so has part: feature:485351-485518:1:exon
so has part: feature:488114-488281:1:exon
so has part: feature:489517-489634:1:exon
so has part: feature:490343-490476:1:exon
so has part: feature:491124-491333:1:exon

XP_032869003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479883-480033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:483078-483259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:484019-484132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485351-485518:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488114-488281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:489517-489634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:490343-490476:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:491124-491333:1:exon

dnaaf3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: dnaaf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 495456..505272
location: region:495456-505272:1
so has part: feature:495456-505272:1:exon
subclass of: SO_0000010

116966771
type: Gene
SIO_000068: ncbigene

position:495456:1
position: 495456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505272:1
position: 505272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495456-505272:1:exon

dnaaf3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dnaaf3
product: dynein axonemal assembly factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033013108.1
SIO_010081: dnaaf3
subclass of: SO_0000673
so part of: dnaaf3
location: join(495456..495518,496839..496933,498024..498166,499489..499582,499881..500038,500753..500929,501369..501491,502558..502680,503347..503599,504021..504135,504691..504765,504852..505272)
location: region:495456-505272:1
so has part: feature:495456-495518:1:exon
so has part: feature:496839-496933:1:exon
so has part: feature:498024-498166:1:exon
so has part: feature:499489-499582:1:exon
so has part: feature:499881-500038:1:exon
so has part: feature:500753-500929:1:exon
so has part: feature:501369-501491:1:exon
so has part: feature:502558-502680:1:exon
so has part: feature:503347-503599:1:exon
so has part: feature:504021-504135:1:exon
so has part: feature:504691-504765:1:exon
so has part: feature:504852-505272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:495456-495518:1:exon

position:495518:1
position: 495518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:496839-496933:1:exon

position:496839:1
position: 496839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496933:1
position: 496933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:498024-498166:1:exon

position:498024:1
position: 498024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498166:1
position: 498166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:499489-499582:1:exon

position:499489:1
position: 499489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499582:1
position: 499582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:499881-500038:1:exon

position:499881:1
position: 499881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500038:1
position: 500038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:500753-500929:1:exon

position:500753:1
position: 500753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500929:1
position: 500929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:501369-501491:1:exon

position:501369:1
position: 501369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501491:1
position: 501491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:502558-502680:1:exon

position:502558:1
position: 502558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502680:1
position: 502680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:503347-503599:1:exon

position:503347:1
position: 503347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503599:1
position: 503599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:504021-504135:1:exon

position:504021:1
position: 504021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504135:1
position: 504135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:504691-504765:1:exon

position:504691:1
position: 504691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504765:1
position: 504765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:504852-505272:1:exon

position:504852:1
position: 504852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dnaaf3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dnaaf3
product: dynein axonemal assembly factor 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033013109.1
SIO_010081: dnaaf3
subclass of: SO_0000673
so part of: dnaaf3
location: join(495456..495518,496839..496933,498024..498166,499489..499582,499881..500038,500753..500929,501369..501491,502558..502680,503347..503521,504021..504135,504691..504765,504852..505272)
location: region:495456-505272:1
so has part: feature:495456-495518:1:exon
so has part: feature:496839-496933:1:exon
so has part: feature:498024-498166:1:exon
so has part: feature:499489-499582:1:exon
so has part: feature:499881-500038:1:exon
so has part: feature:500753-500929:1:exon
so has part: feature:501369-501491:1:exon
so has part: feature:502558-502680:1:exon
so has part: feature:503347-503521:1:exon
so has part: feature:504021-504135:1:exon
so has part: feature:504691-504765:1:exon
so has part: feature:504852-505272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:495456-495518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496839-496933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:498024-498166:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:499489-499582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499881-500038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500753-500929:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501369-501491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502558-502680:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503347-503521:1:exon

position:503521:1
position: 503521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:504021-504135:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504691-504765:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:504852-505272:1:exon

dnaaf3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dnaaf3
product: dynein axonemal assembly factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033013107.1
SIO_010081: dnaaf3
subclass of: SO_0000673
so part of: dnaaf3
location: join(495466..495503,496839..496933,498024..498166,499489..499582,499881..500038,500753..500929,501369..501491,502558..502680,503347..503599,504021..504135,504691..504765,504852..505272)
location: region:495466-505272:1
so has part: feature:495466-495503:1:exon
so has part: feature:496839-496933:1:exon
so has part: feature:498024-498166:1:exon
so has part: feature:499489-499582:1:exon
so has part: feature:499881-500038:1:exon
so has part: feature:500753-500929:1:exon
so has part: feature:501369-501491:1:exon
so has part: feature:502558-502680:1:exon
so has part: feature:503347-503599:1:exon
so has part: feature:504021-504135:1:exon
so has part: feature:504691-504765:1:exon
so has part: feature:504852-505272:1:exon

position:495466:1
position: 495466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495466-495503:1:exon

position:495503:1
position: 495503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:496839-496933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:498024-498166:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:499489-499582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499881-500038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500753-500929:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501369-501491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502558-502680:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503347-503599:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504021-504135:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504691-504765:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:504852-505272:1:exon

dnaaf3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dnaaf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein assembly factor 3, axonemal isoform X1
translation: MTACGTGEGFGTVTWWGFSPAMDFQKQGLSASMKALRSNEDGVPELNILMVGAGDSRHLLTTICRAHRWPTRKIHFYIVENNLELLGRHLLFLTIALERPSTMGLREKTELLLELFGNSLIRSQTATYLQERANDFIRYVTDLDYLEKKLPMVDMSGLKFKERDQLEAIFKFWRDADAKMFQISKLWDLRSRQYLGNRYDSKKGVYDWDLHMKLYDRGANIINNRQYYQWRDKGLAFVNREGLYDVPNKSLASGMLVNCKGEKIAARGFWGDIVTSPYVAFGIVSEEESLLKKANGIYIKTAQDISQHNVTALFHELVSKERYVLLPSKEEATLTEITDEDEDELKAASGTKDKATGESEQIVTEGQAVKQCHGMDNVSGPAEYDYLPLPDVNIHFLPLNCVTELHNKSNYRNLFNVIYLSCSMVHQLKPELEQIAAPRATLIVELTKFMLDLRSETMSRFANRVSELGAGAGFLPVGSVDSDRDAFARFQLKEDP
SIO_010081: dnaaf3
subclass of: SO_0000673
so part of: dnaaf3
location: join(496852..496933,498024..498166,499489..499582,499881..500038,500753..500929,501369..501491,502558..502680,503347..503599,504021..504135,504691..504765,504852..504999)
location: region:496852-504999:1
so has part: feature:496852-496933:1:exon
so has part: feature:498024-498166:1:exon
so has part: feature:499489-499582:1:exon
so has part: feature:499881-500038:1:exon
so has part: feature:500753-500929:1:exon
so has part: feature:501369-501491:1:exon
so has part: feature:502558-502680:1:exon
so has part: feature:503347-503599:1:exon
so has part: feature:504021-504135:1:exon
so has part: feature:504691-504765:1:exon
so has part: feature:504852-504999:1:exon

XP_032868998.1
type: Protein
SIO_000068: ncbiprotein

position:496852:1
position: 496852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504999:1
position: 504999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496852-496933:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498024-498166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:499489-499582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:499881-500038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500753-500929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:501369-501491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502558-502680:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503347-503599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:504021-504135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504691-504765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504852-504999:1:exon

dnaaf3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dnaaf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein assembly factor 3, axonemal isoform X1
translation: MTACGTGEGFGTVTWWGFSPAMDFQKQGLSASMKALRSNEDGVPELNILMVGAGDSRHLLTTICRAHRWPTRKIHFYIVENNLELLGRHLLFLTIALERPSTMGLREKTELLLELFGNSLIRSQTATYLQERANDFIRYVTDLDYLEKKLPMVDMSGLKFKERDQLEAIFKFWRDADAKMFQISKLWDLRSRQYLGNRYDSKKGVYDWDLHMKLYDRGANIINNRQYYQWRDKGLAFVNREGLYDVPNKSLASGMLVNCKGEKIAARGFWGDIVTSPYVAFGIVSEEESLLKKANGIYIKTAQDISQHNVTALFHELVSKERYVLLPSKEEATLTEITDEDEDELKAASGTKDKATGESEQIVTEGQAVKQCHGMDNVSGPAEYDYLPLPDVNIHFLPLNCVTELHNKSNYRNLFNVIYLSCSMVHQLKPELEQIAAPRATLIVELTKFMLDLRSETMSRFANRVSELGAGAGFLPVGSVDSDRDAFARFQLKEDP
SIO_010081: dnaaf3
subclass of: SO_0000673
so part of: dnaaf3
location: join(496852..496933,498024..498166,499489..499582,499881..500038,500753..500929,501369..501491,502558..502680,503347..503599,504021..504135,504691..504765,504852..504999)
location: region:496852-504999:1
so has part: feature:496852-496933:1:exon
so has part: feature:498024-498166:1:exon
so has part: feature:499489-499582:1:exon
so has part: feature:499881-500038:1:exon
so has part: feature:500753-500929:1:exon
so has part: feature:501369-501491:1:exon
so has part: feature:502558-502680:1:exon
so has part: feature:503347-503599:1:exon
so has part: feature:504021-504135:1:exon
so has part: feature:504691-504765:1:exon
so has part: feature:504852-504999:1:exon

XP_032868999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496852-496933:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498024-498166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:499489-499582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:499881-500038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500753-500929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:501369-501491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502558-502680:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503347-503599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:504021-504135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504691-504765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504852-504999:1:exon

dnaaf3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dnaaf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein assembly factor 3, axonemal isoform X2
translation: MTACGTGEGFGTVTWWGFSPAMDFQKQGLSASMKALRSNEDGVPELNILMVGAGDSRHLLTTICRAHRWPTRKIHFYIVENNLELLGRHLLFLTIALERPSTMGLREKTELLLELFGNSLIRSQTATYLQERANDFIRYVTDLDYLEKKLPMVDMSGLKFKERDQLEAIFKFWRDADAKMFQISKLWDLRSRQYLGNRYDSKKGVYDWDLHMKLYDRGANIINNRQYYQWRDKGLAFVNREGLYDVPNKSLASGMLVNCKGEKIAARGFWGDIVTSPYVAFGIVSEEESLLKKANGIYIKTAQDISQHNVTALFHELVSKERYVLLPSKEEATLTEITDEDEDELKAASGTKDKATGENYLPLPDVNIHFLPLNCVTELHNKSNYRNLFNVIYLSCSMVHQLKPELEQIAAPRATLIVELTKFMLDLRSETMSRFANRVSELGAGAGFLPVGSVDSDRDAFARFQLKEDP
SIO_010081: dnaaf3
subclass of: SO_0000673
so part of: dnaaf3
location: join(496852..496933,498024..498166,499489..499582,499881..500038,500753..500929,501369..501491,502558..502680,503347..503521,504021..504135,504691..504765,504852..504999)
location: region:496852-504999:1
so has part: feature:496852-496933:1:exon
so has part: feature:498024-498166:1:exon
so has part: feature:499489-499582:1:exon
so has part: feature:499881-500038:1:exon
so has part: feature:500753-500929:1:exon
so has part: feature:501369-501491:1:exon
so has part: feature:502558-502680:1:exon
so has part: feature:503347-503521:1:exon
so has part: feature:504021-504135:1:exon
so has part: feature:504691-504765:1:exon
so has part: feature:504852-504999:1:exon

XP_032869000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496852-496933:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498024-498166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:499489-499582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:499881-500038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500753-500929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:501369-501491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502558-502680:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503347-503521:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:504021-504135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504691-504765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504852-504999:1:exon

tnnt1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tnnt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 512781..535647
location: region:512781-535647:1
so has part: feature:512781-535647:1:exon
subclass of: SO_0000010

116966875
type: Gene
SIO_000068: ncbigene

position:512781:1
position: 512781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535647:1
position: 535647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512781-535647:1:exon

tnnt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tnnt1
product: troponin T1, slow skeletal type, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033013227.1
SIO_010081: tnnt1
subclass of: SO_0000673
so part of: tnnt1
location: join(512781..512909,515040..515090,516798..516811,517156..517170,518067..518090,519280..519309,521376..521384,522930..522951,523630..523690,524619..524735,525699..525776,526017..526130,526968..527077,527810..527900,534926..534966,535431..535647)
location: region:512781-535647:1
so has part: feature:512781-512909:1:exon
so has part: feature:515040-515090:1:exon
so has part: feature:516798-516811:1:exon
so has part: feature:517156-517170:1:exon
so has part: feature:518067-518090:1:exon
so has part: feature:519280-519309:1:exon
so has part: feature:521376-521384:1:exon
so has part: feature:522930-522951:1:exon
so has part: feature:523630-523690:1:exon
so has part: feature:524619-524735:1:exon
so has part: feature:525699-525776:1:exon
so has part: feature:526017-526130:1:exon
so has part: feature:526968-527077:1:exon
so has part: feature:527810-527900:1:exon
so has part: feature:534926-534966:1:exon
so has part: feature:535431-535647:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512781-512909:1:exon

position:512909:1
position: 512909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:515040-515090:1:exon

position:515040:1
position: 515040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515090:1
position: 515090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516798-516811:1:exon

position:516798:1
position: 516798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516811:1
position: 516811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:517156-517170:1:exon

position:517156:1
position: 517156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517170:1
position: 517170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:518067-518090:1:exon

position:518067:1
position: 518067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518090:1
position: 518090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:519280-519309:1:exon

position:519280:1
position: 519280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519309:1
position: 519309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:521376-521384:1:exon

position:521376:1
position: 521376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521384:1
position: 521384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:522930-522951:1:exon

position:522930:1
position: 522930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522951:1
position: 522951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:523630-523690:1:exon

position:523630:1
position: 523630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523690:1
position: 523690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:524619-524735:1:exon

position:524619:1
position: 524619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524735:1
position: 524735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:525699-525776:1:exon

position:525699:1
position: 525699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525776:1
position: 525776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:526017-526130:1:exon

position:526017:1
position: 526017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526130:1
position: 526130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:526968-527077:1:exon

position:526968:1
position: 526968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527077:1
position: 527077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:527810-527900:1:exon

position:527810:1
position: 527810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527900:1
position: 527900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:534926-534966:1:exon

position:534926:1
position: 534926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534966:1
position: 534966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:535431-535647:1:exon

position:535431:1
position: 535431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tnnt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tnnt1
product: troponin T1, slow skeletal type, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033013228.1
SIO_010081: tnnt1
subclass of: SO_0000673
so part of: tnnt1
location: join(512782..512909,515040..515090,516798..516811,517156..517170,519280..519309,521376..521384,522930..522951,523630..523690,524619..524735,525699..525776,526017..526130,526968..527077,527810..527900,534926..534966,535431..535647)
location: region:512782-535647:1
so has part: feature:512782-512909:1:exon
so has part: feature:515040-515090:1:exon
so has part: feature:516798-516811:1:exon
so has part: feature:517156-517170:1:exon
so has part: feature:519280-519309:1:exon
so has part: feature:521376-521384:1:exon
so has part: feature:522930-522951:1:exon
so has part: feature:523630-523690:1:exon
so has part: feature:524619-524735:1:exon
so has part: feature:525699-525776:1:exon
so has part: feature:526017-526130:1:exon
so has part: feature:526968-527077:1:exon
so has part: feature:527810-527900:1:exon
so has part: feature:534926-534966:1:exon
so has part: feature:535431-535647:1:exon

position:512782:1
position: 512782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512782-512909:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515040-515090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516798-516811:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517156-517170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519280-519309:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:521376-521384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522930-522951:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:523630-523690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:524619-524735:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525699-525776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526017-526130:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:526968-527077:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:527810-527900:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:534926-534966:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:535431-535647:1:exon

tnnt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tnnt1
product: troponin T1, slow skeletal type, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033013225.1
SIO_010081: tnnt1
subclass of: SO_0000673
so part of: tnnt1
location: join(512949..513122,515040..515090,516798..516811,517156..517170,518067..518090,519280..519309,521376..521384,522930..522951,523630..523690,524619..524735,525699..525776,526017..526130,526968..527077,527810..527900,534926..534966,535431..535647)
location: region:512949-535647:1
so has part: feature:512949-513122:1:exon
so has part: feature:515040-515090:1:exon
so has part: feature:516798-516811:1:exon
so has part: feature:517156-517170:1:exon
so has part: feature:518067-518090:1:exon
so has part: feature:519280-519309:1:exon
so has part: feature:521376-521384:1:exon
so has part: feature:522930-522951:1:exon
so has part: feature:523630-523690:1:exon
so has part: feature:524619-524735:1:exon
so has part: feature:525699-525776:1:exon
so has part: feature:526017-526130:1:exon
so has part: feature:526968-527077:1:exon
so has part: feature:527810-527900:1:exon
so has part: feature:534926-534966:1:exon
so has part: feature:535431-535647:1:exon

position:512949:1
position: 512949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512949-513122:1:exon

position:513122:1
position: 513122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:515040-515090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516798-516811:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517156-517170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518067-518090:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519280-519309:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:521376-521384:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522930-522951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:523630-523690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:524619-524735:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525699-525776:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:526017-526130:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:526968-527077:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527810-527900:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:534926-534966:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535431-535647:1:exon

tnnt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tnnt1
product: troponin T1, slow skeletal type, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033013226.1
SIO_010081: tnnt1
subclass of: SO_0000673
so part of: tnnt1
location: join(512949..513122,515040..515090,516798..516811,517156..517170,519280..519309,521376..521384,522930..522951,523630..523690,524619..524735,525699..525776,526017..526130,526968..527077,527810..527900,534926..534966,535431..535647)
location: region:512949-535647:1
so has part: feature:512949-513122:1:exon
so has part: feature:515040-515090:1:exon
so has part: feature:516798-516811:1:exon
so has part: feature:517156-517170:1:exon
so has part: feature:519280-519309:1:exon
so has part: feature:521376-521384:1:exon
so has part: feature:522930-522951:1:exon
so has part: feature:523630-523690:1:exon
so has part: feature:524619-524735:1:exon
so has part: feature:525699-525776:1:exon
so has part: feature:526017-526130:1:exon
so has part: feature:526968-527077:1:exon
so has part: feature:527810-527900:1:exon
so has part: feature:534926-534966:1:exon
so has part: feature:535431-535647:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512949-513122:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515040-515090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516798-516811:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517156-517170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519280-519309:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:521376-521384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522930-522951:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:523630-523690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:524619-524735:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525699-525776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526017-526130:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:526968-527077:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:527810-527900:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:534926-534966:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:535431-535647:1:exon

tnnt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tnnt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin T, slow skeletal muscle isoform X1
translation: MFSRMLQRWEYPSGVCIGSFPGCRMSDIDDQDDYEEQQEGEPEEEEQQYGQEDEDYQEQEEQALQEEERPRPKLVVPQISGPKIPDGERVDFDDIHRKRMEKDLLELQTLIDAHFEQRKKEEEELICLKDRIEHRRSERAEQQRVRAEKERDRQTRLMEEKNRKEEEEAKKRADDDAKKKKVLSNMGAHYGGYLVKAEQRRGKRQTGREMKKKILAERLKPLNIEHLSDDKTREKAKELWEWMYQLESEKFDLMDKLKRQKYEINLLHNRINEHQKFKKAAGKGKVGGRWK
SIO_010081: tnnt1
subclass of: SO_0000673
so part of: tnnt1
location: join(513070..513122,515040..515090,516798..516811,517156..517170,518067..518090,519280..519309,521376..521384,522930..522951,523630..523690,524619..524735,525699..525776,526017..526130,526968..527077,527810..527900,534926..534966,535431..535476)
location: region:513070-535476:1
so has part: feature:513070-513122:1:exon
so has part: feature:515040-515090:1:exon
so has part: feature:516798-516811:1:exon
so has part: feature:517156-517170:1:exon
so has part: feature:518067-518090:1:exon
so has part: feature:519280-519309:1:exon
so has part: feature:521376-521384:1:exon
so has part: feature:522930-522951:1:exon
so has part: feature:523630-523690:1:exon
so has part: feature:524619-524735:1:exon
so has part: feature:525699-525776:1:exon
so has part: feature:526017-526130:1:exon
so has part: feature:526968-527077:1:exon
so has part: feature:527810-527900:1:exon
so has part: feature:534926-534966:1:exon
so has part: feature:535431-535476:1:exon

XP_032869116.1
type: Protein
SIO_000068: ncbiprotein

position:513070:1
position: 513070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535476:1
position: 535476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513070-513122:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515040-515090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516798-516811:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517156-517170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518067-518090:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519280-519309:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:521376-521384:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522930-522951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:523630-523690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:524619-524735:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525699-525776:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:526017-526130:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:526968-527077:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527810-527900:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:534926-534966:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535431-535476:1:exon

tnnt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tnnt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin T, slow skeletal muscle isoform X2
translation: MFSRMLQRWEYPSGVCIGSFPGCRMSDIDDQDDYEEQQEGEPEEDEDYQEQEEQALQEEERPRPKLVVPQISGPKIPDGERVDFDDIHRKRMEKDLLELQTLIDAHFEQRKKEEEELICLKDRIEHRRSERAEQQRVRAEKERDRQTRLMEEKNRKEEEEAKKRADDDAKKKKVLSNMGAHYGGYLVKAEQRRGKRQTGREMKKKILAERLKPLNIEHLSDDKTREKAKELWEWMYQLESEKFDLMDKLKRQKYEINLLHNRINEHQKFKKAAGKGKVGGRWK
SIO_010081: tnnt1
subclass of: SO_0000673
so part of: tnnt1
location: join(513070..513122,515040..515090,516798..516811,517156..517170,519280..519309,521376..521384,522930..522951,523630..523690,524619..524735,525699..525776,526017..526130,526968..527077,527810..527900,534926..534966,535431..535476)
location: region:513070-535476:1
so has part: feature:513070-513122:1:exon
so has part: feature:515040-515090:1:exon
so has part: feature:516798-516811:1:exon
so has part: feature:517156-517170:1:exon
so has part: feature:519280-519309:1:exon
so has part: feature:521376-521384:1:exon
so has part: feature:522930-522951:1:exon
so has part: feature:523630-523690:1:exon
so has part: feature:524619-524735:1:exon
so has part: feature:525699-525776:1:exon
so has part: feature:526017-526130:1:exon
so has part: feature:526968-527077:1:exon
so has part: feature:527810-527900:1:exon
so has part: feature:534926-534966:1:exon
so has part: feature:535431-535476:1:exon

XP_032869117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513070-513122:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515040-515090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516798-516811:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517156-517170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519280-519309:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:521376-521384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522930-522951:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:523630-523690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:524619-524735:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525699-525776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526017-526130:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:526968-527077:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:527810-527900:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:534926-534966:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:535431-535476:1:exon

tnnt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tnnt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin T, slow skeletal muscle isoform X3
translation: MSDIDDQDDYEEQQEGEPEEEEQQYGQEDEDYQEQEEQALQEEERPRPKLVVPQISGPKIPDGERVDFDDIHRKRMEKDLLELQTLIDAHFEQRKKEEEELICLKDRIEHRRSERAEQQRVRAEKERDRQTRLMEEKNRKEEEEAKKRADDDAKKKKVLSNMGAHYGGYLVKAEQRRGKRQTGREMKKKILAERLKPLNIEHLSDDKTREKAKELWEWMYQLESEKFDLMDKLKRQKYEINLLHNRINEHQKFKKAAGKGKVGGRWK
SIO_010081: tnnt1
subclass of: SO_0000673
so part of: tnnt1
location: join(515059..515090,516798..516811,517156..517170,518067..518090,519280..519309,521376..521384,522930..522951,523630..523690,524619..524735,525699..525776,526017..526130,526968..527077,527810..527900,534926..534966,535431..535476)
location: region:515059-535476:1
so has part: feature:515059-515090:1:exon
so has part: feature:516798-516811:1:exon
so has part: feature:517156-517170:1:exon
so has part: feature:518067-518090:1:exon
so has part: feature:519280-519309:1:exon
so has part: feature:521376-521384:1:exon
so has part: feature:522930-522951:1:exon
so has part: feature:523630-523690:1:exon
so has part: feature:524619-524735:1:exon
so has part: feature:525699-525776:1:exon
so has part: feature:526017-526130:1:exon
so has part: feature:526968-527077:1:exon
so has part: feature:527810-527900:1:exon
so has part: feature:534926-534966:1:exon
so has part: feature:535431-535476:1:exon

XP_032869118.1
type: Protein
SIO_000068: ncbiprotein

position:515059:1
position: 515059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515059-515090:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516798-516811:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517156-517170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518067-518090:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519280-519309:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:521376-521384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522930-522951:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:523630-523690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:524619-524735:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525699-525776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526017-526130:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:526968-527077:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:527810-527900:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:534926-534966:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:535431-535476:1:exon

tnnt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tnnt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin T, slow skeletal muscle isoform X4
translation: MSDIDDQDDYEEQQEGEPEEDEDYQEQEEQALQEEERPRPKLVVPQISGPKIPDGERVDFDDIHRKRMEKDLLELQTLIDAHFEQRKKEEEELICLKDRIEHRRSERAEQQRVRAEKERDRQTRLMEEKNRKEEEEAKKRADDDAKKKKVLSNMGAHYGGYLVKAEQRRGKRQTGREMKKKILAERLKPLNIEHLSDDKTREKAKELWEWMYQLESEKFDLMDKLKRQKYEINLLHNRINEHQKFKKAAGKGKVGGRWK
SIO_010081: tnnt1
subclass of: SO_0000673
so part of: tnnt1
location: join(515059..515090,516798..516811,517156..517170,519280..519309,521376..521384,522930..522951,523630..523690,524619..524735,525699..525776,526017..526130,526968..527077,527810..527900,534926..534966,535431..535476)
location: region:515059-535476:1
so has part: feature:515059-515090:1:exon
so has part: feature:516798-516811:1:exon
so has part: feature:517156-517170:1:exon
so has part: feature:519280-519309:1:exon
so has part: feature:521376-521384:1:exon
so has part: feature:522930-522951:1:exon
so has part: feature:523630-523690:1:exon
so has part: feature:524619-524735:1:exon
so has part: feature:525699-525776:1:exon
so has part: feature:526017-526130:1:exon
so has part: feature:526968-527077:1:exon
so has part: feature:527810-527900:1:exon
so has part: feature:534926-534966:1:exon
so has part: feature:535431-535476:1:exon

XP_032869119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515059-515090:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516798-516811:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517156-517170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519280-519309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:521376-521384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522930-522951:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:523630-523690:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:524619-524735:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525699-525776:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:526017-526130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526968-527077:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:527810-527900:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:534926-534966:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:535431-535476:1:exon

ppp1r12c
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ppp1r12c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 536577..578653
location: region:536577-578653:1
so has part: feature:536577-578653:1:exon
subclass of: SO_0000010

116967017
type: Gene
SIO_000068: ncbigene

position:536577:1
position: 536577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578653:1
position: 578653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536577-578653:1:exon

ppp1r12c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ppp1r12c
product: protein phosphatase 1 regulatory subunit 12C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033013445.1
SIO_010081: ppp1r12c
subclass of: SO_0000673
so part of: ppp1r12c
location: join(536577..536908,542672..542802,548798..548916,549786..549945,550657..550801,551728..551802,552365..552450,554180..554349,555213..555313,559496..559675,561321..561418,562741..562830,564311..564401,565241..565384,566333..566450,566898..567031,569242..569288,570304..570409,571185..571289,572313..572360,573690..573740,576708..578653)
location: region:536577-578653:1
so has part: feature:536577-536908:1:exon
so has part: feature:542672-542802:1:exon
so has part: feature:548798-548916:1:exon
so has part: feature:549786-549945:1:exon
so has part: feature:550657-550801:1:exon
so has part: feature:551728-551802:1:exon
so has part: feature:552365-552450:1:exon
so has part: feature:554180-554349:1:exon
so has part: feature:555213-555313:1:exon
so has part: feature:559496-559675:1:exon
so has part: feature:561321-561418:1:exon
so has part: feature:562741-562830:1:exon
so has part: feature:564311-564401:1:exon
so has part: feature:565241-565384:1:exon
so has part: feature:566333-566450:1:exon
so has part: feature:566898-567031:1:exon
so has part: feature:569242-569288:1:exon
so has part: feature:570304-570409:1:exon
so has part: feature:571185-571289:1:exon
so has part: feature:572313-572360:1:exon
so has part: feature:573690-573740:1:exon
so has part: feature:576708-578653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536577-536908:1:exon

position:536908:1
position: 536908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:542672-542802:1:exon

position:542672:1
position: 542672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542802:1
position: 542802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:548798-548916:1:exon

position:548798:1
position: 548798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548916:1
position: 548916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:549786-549945:1:exon

position:549786:1
position: 549786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549945:1
position: 549945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:550657-550801:1:exon

position:550657:1
position: 550657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550801:1
position: 550801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:551728-551802:1:exon

position:551728:1
position: 551728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551802:1
position: 551802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:552365-552450:1:exon

position:552365:1
position: 552365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552450:1
position: 552450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:554180-554349:1:exon

position:554180:1
position: 554180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554349:1
position: 554349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:555213-555313:1:exon

position:555213:1
position: 555213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555313:1
position: 555313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:559496-559675:1:exon

position:559496:1
position: 559496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559675:1
position: 559675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:561321-561418:1:exon

position:561321:1
position: 561321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561418:1
position: 561418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:562741-562830:1:exon

position:562741:1
position: 562741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562830:1
position: 562830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:564311-564401:1:exon

position:564311:1
position: 564311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564401:1
position: 564401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:565241-565384:1:exon

position:565241:1
position: 565241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565384:1
position: 565384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:566333-566450:1:exon

position:566333:1
position: 566333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566450:1
position: 566450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:566898-567031:1:exon

position:566898:1
position: 566898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567031:1
position: 567031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:569242-569288:1:exon

position:569242:1
position: 569242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569288:1
position: 569288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:570304-570409:1:exon

position:570304:1
position: 570304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570409:1
position: 570409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:571185-571289:1:exon

position:571185:1
position: 571185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571289:1
position: 571289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:572313-572360:1:exon

position:572313:1
position: 572313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572360:1
position: 572360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:573690-573740:1:exon

position:573690:1
position: 573690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573740:1
position: 573740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:576708-578653:1:exon

position:576708:1
position: 576708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ppp1r12c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ppp1r12c
product: protein phosphatase 1 regulatory subunit 12C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033013447.1
SIO_010081: ppp1r12c
subclass of: SO_0000673
so part of: ppp1r12c
location: join(536577..536908,542672..542802,548798..548916,549786..549945,550657..550801,551728..551802,552365..552450,554180..554349,555213..555313,561321..561418,562741..562830,564311..564401,565241..565384,566333..566450,566898..567031,569242..569288,570304..570409,571185..571289,572313..572360,573690..573740,576708..578653)
location: region:536577-578653:1
so has part: feature:536577-536908:1:exon
so has part: feature:542672-542802:1:exon
so has part: feature:548798-548916:1:exon
so has part: feature:549786-549945:1:exon
so has part: feature:550657-550801:1:exon
so has part: feature:551728-551802:1:exon
so has part: feature:552365-552450:1:exon
so has part: feature:554180-554349:1:exon
so has part: feature:555213-555313:1:exon
so has part: feature:561321-561418:1:exon
so has part: feature:562741-562830:1:exon
so has part: feature:564311-564401:1:exon
so has part: feature:565241-565384:1:exon
so has part: feature:566333-566450:1:exon
so has part: feature:566898-567031:1:exon
so has part: feature:569242-569288:1:exon
so has part: feature:570304-570409:1:exon
so has part: feature:571185-571289:1:exon
so has part: feature:572313-572360:1:exon
so has part: feature:573690-573740:1:exon
so has part: feature:576708-578653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536577-536908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542672-542802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548798-548916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549786-549945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550657-550801:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551728-551802:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552365-552450:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554180-554349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555213-555313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:561321-561418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562741-562830:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:564311-564401:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:565241-565384:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:566333-566450:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:566898-567031:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:569242-569288:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:570304-570409:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:571185-571289:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:572313-572360:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:573690-573740:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:576708-578653:1:exon

ppp1r12c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ppp1r12c
product: protein phosphatase 1 regulatory subunit 12C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033013446.1
SIO_010081: ppp1r12c
subclass of: SO_0000673
so part of: ppp1r12c
location: join(536577..536908,542672..542802,548798..548916,549786..549945,550657..550801,551728..551802,552365..552450,554180..554349,555216..555313,559496..559675,561321..561418,562741..562830,564311..564401,565241..565384,566333..566450,566898..567031,569242..569288,570304..570409,571185..571289,572313..572360,573690..573740,576708..578653)
location: region:536577-578653:1
so has part: feature:536577-536908:1:exon
so has part: feature:542672-542802:1:exon
so has part: feature:548798-548916:1:exon
so has part: feature:549786-549945:1:exon
so has part: feature:550657-550801:1:exon
so has part: feature:551728-551802:1:exon
so has part: feature:552365-552450:1:exon
so has part: feature:554180-554349:1:exon
so has part: feature:555216-555313:1:exon
so has part: feature:559496-559675:1:exon
so has part: feature:561321-561418:1:exon
so has part: feature:562741-562830:1:exon
so has part: feature:564311-564401:1:exon
so has part: feature:565241-565384:1:exon
so has part: feature:566333-566450:1:exon
so has part: feature:566898-567031:1:exon
so has part: feature:569242-569288:1:exon
so has part: feature:570304-570409:1:exon
so has part: feature:571185-571289:1:exon
so has part: feature:572313-572360:1:exon
so has part: feature:573690-573740:1:exon
so has part: feature:576708-578653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536577-536908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542672-542802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548798-548916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549786-549945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550657-550801:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551728-551802:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552365-552450:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554180-554349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555216-555313:1:exon

position:555216:1
position: 555216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:559496-559675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:561321-561418:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562741-562830:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:564311-564401:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:565241-565384:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:566333-566450:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:566898-567031:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:569242-569288:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:570304-570409:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:571185-571289:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:572313-572360:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:573690-573740:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:576708-578653:1:exon

ppp1r12c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ppp1r12c
product: protein phosphatase 1 regulatory subunit 12C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033013448.1
SIO_010081: ppp1r12c
subclass of: SO_0000673
so part of: ppp1r12c
location: join(536577..536908,542672..542802,548798..548916,549786..549945,550657..550801,551728..551802,552365..552450,554180..554349,555216..555313,561321..561418,562741..562830,564311..564401,565241..565384,566333..566450,566898..567031,569242..569288,570304..570409,571185..571289,572313..572360,573690..573740,576708..578653)
location: region:536577-578653:1
so has part: feature:536577-536908:1:exon
so has part: feature:542672-542802:1:exon
so has part: feature:548798-548916:1:exon
so has part: feature:549786-549945:1:exon
so has part: feature:550657-550801:1:exon
so has part: feature:551728-551802:1:exon
so has part: feature:552365-552450:1:exon
so has part: feature:554180-554349:1:exon
so has part: feature:555216-555313:1:exon
so has part: feature:561321-561418:1:exon
so has part: feature:562741-562830:1:exon
so has part: feature:564311-564401:1:exon
so has part: feature:565241-565384:1:exon
so has part: feature:566333-566450:1:exon
so has part: feature:566898-567031:1:exon
so has part: feature:569242-569288:1:exon
so has part: feature:570304-570409:1:exon
so has part: feature:571185-571289:1:exon
so has part: feature:572313-572360:1:exon
so has part: feature:573690-573740:1:exon
so has part: feature:576708-578653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536577-536908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542672-542802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548798-548916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549786-549945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550657-550801:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551728-551802:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552365-552450:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554180-554349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555216-555313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:561321-561418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562741-562830:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:564311-564401:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:565241-565384:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:566333-566450:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:566898-567031:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:569242-569288:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:570304-570409:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:571185-571289:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:572313-572360:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:573690-573740:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:576708-578653:1:exon

ppp1r12c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ppp1r12c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 12C isoform X1
translation: MSERAGSGVAAAAAVAASEKRRQQLQRWKGSCTDLEAGEPRWRARPGAGARAGAPRRVRFEAAAEFLAACASGDALDAEEMLGGGADVDCANTDGISALHQACIDENLEMVEFLLRQNANVDQSDNEGWTPLHVAVSCGYSEIVECLINHAASIAAVNSDGQLPIDLAEENYMENLLQAEITKQGIDVESARREEEDLLLQHARQWLNSGKIEDISHPKTGANALHVAAAKGYIEVMRLLLQAGFSVAARDKDGWTPLHAAAHWGMEDSCKLLVEHFCDMEAVNNSGQTPFDVADEDILSLLEDLQKKQDDLRTEKEEKMKRAIIETSTQPQQPSTKPRKSSVCRMSSREKISVQDLSKERKTLETLSLDESKKEESSSSSSETEDVSDSDSECETAEKKRSSLNDASNVNGTEVLPRVPAVTLAPSGLKYSGPSAKHLVNQDAPPAWQTELRKTSSFVALQDAQITSDKTPLTSIRRSASTPRLGAQWKGKDVAEPRLARVPPTPIGRSLSVPETCAEQLVSSTYQKVKDPNCQQGETTTPTSNVDFKERRKLYLTPVRDEESESQRKARSRHARQSRRSTQGVTLTDLKEAEKTLGISTEKKTQEQLERREEVKENEGKKERSSLSEDKDAASRLRPVTTGVGNSGSALAPTHSRHSTPTVSFQDADTGAELESDRREEGDADYNSRNRLSVRDRRKARKERRFTGKADSTEEEDGTEQMNSLDTPTHSSLPADQMGDWIESRVGIHSLHSTGARADSNGDFRKMYEMVLSENVRLKEQLRDAQYYLSQANRELERVMKRQQRGDQPARLELERFERRAFERRTAELEERLKILTDLKVDNQRLKDENAALIRVISRLSK
SIO_010081: ppp1r12c
subclass of: SO_0000673
so part of: ppp1r12c
location: join(536606..536908,542672..542802,548798..548916,549786..549945,550657..550801,551728..551802,552365..552450,554180..554349,555213..555313,559496..559675,561321..561418,562741..562830,564311..564401,565241..565384,566333..566450,566898..567031,569242..569288,570304..570409,571185..571289,572313..572360,573690..573740,576708..576794)
location: region:536606-576794:1
so has part: feature:536606-536908:1:exon
so has part: feature:542672-542802:1:exon
so has part: feature:548798-548916:1:exon
so has part: feature:549786-549945:1:exon
so has part: feature:550657-550801:1:exon
so has part: feature:551728-551802:1:exon
so has part: feature:552365-552450:1:exon
so has part: feature:554180-554349:1:exon
so has part: feature:555213-555313:1:exon
so has part: feature:559496-559675:1:exon
so has part: feature:561321-561418:1:exon
so has part: feature:562741-562830:1:exon
so has part: feature:564311-564401:1:exon
so has part: feature:565241-565384:1:exon
so has part: feature:566333-566450:1:exon
so has part: feature:566898-567031:1:exon
so has part: feature:569242-569288:1:exon
so has part: feature:570304-570409:1:exon
so has part: feature:571185-571289:1:exon
so has part: feature:572313-572360:1:exon
so has part: feature:573690-573740:1:exon
so has part: feature:576708-576794:1:exon

XP_032869336.1
type: Protein
SIO_000068: ncbiprotein

position:536606:1
position: 536606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576794:1
position: 576794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536606-536908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542672-542802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548798-548916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549786-549945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550657-550801:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551728-551802:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552365-552450:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554180-554349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555213-555313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:559496-559675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:561321-561418:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562741-562830:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:564311-564401:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:565241-565384:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:566333-566450:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:566898-567031:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:569242-569288:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:570304-570409:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:571185-571289:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:572313-572360:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:573690-573740:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:576708-576794:1:exon

ppp1r12c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ppp1r12c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 12C isoform X3
translation: MSERAGSGVAAAAAVAASEKRRQQLQRWKGSCTDLEAGEPRWRARPGAGARAGAPRRVRFEAAAEFLAACASGDALDAEEMLGGGADVDCANTDGISALHQACIDENLEMVEFLLRQNANVDQSDNEGWTPLHVAVSCGYSEIVECLINHAASIAAVNSDGQLPIDLAEENYMENLLQAEITKQGIDVESARREEEDLLLQHARQWLNSGKIEDISHPKTGANALHVAAAKGYIEVMRLLLQAGFSVAARDKDGWTPLHAAAHWGMEDSCKLLVEHFCDMEAVNNSGQTPFDVADEDILSLLEDLQKKQDDLRTEKEEKMKRAIIETSTQPQQPSTKPRKSSVCRMSSREKISVQDLSKERKTLETLSLDESKKEESSSSSSETEDVSDSDSECETAEKKRSSLNDASNVNGTEVLPRVPAVTLAPSGLKGKDVAEPRLARVPPTPIGRSLSVPETCAEQLVSSTYQKVKDPNCQQGETTTPTSNVDFKERRKLYLTPVRDEESESQRKARSRHARQSRRSTQGVTLTDLKEAEKTLGISTEKKTQEQLERREEVKENEGKKERSSLSEDKDAASRLRPVTTGVGNSGSALAPTHSRHSTPTVSFQDADTGAELESDRREEGDADYNSRNRLSVRDRRKARKERRFTGKADSTEEEDGTEQMNSLDTPTHSSLPADQMGDWIESRVGIHSLHSTGARADSNGDFRKMYEMVLSENVRLKEQLRDAQYYLSQANRELERVMKRQQRGDQPARLELERFERRAFERRTAELEERLKILTDLKVDNQRLKDENAALIRVISRLSK
SIO_010081: ppp1r12c
subclass of: SO_0000673
so part of: ppp1r12c
location: join(536606..536908,542672..542802,548798..548916,549786..549945,550657..550801,551728..551802,552365..552450,554180..554349,555213..555313,561321..561418,562741..562830,564311..564401,565241..565384,566333..566450,566898..567031,569242..569288,570304..570409,571185..571289,572313..572360,573690..573740,576708..576794)
location: region:536606-576794:1
so has part: feature:536606-536908:1:exon
so has part: feature:542672-542802:1:exon
so has part: feature:548798-548916:1:exon
so has part: feature:549786-549945:1:exon
so has part: feature:550657-550801:1:exon
so has part: feature:551728-551802:1:exon
so has part: feature:552365-552450:1:exon
so has part: feature:554180-554349:1:exon
so has part: feature:555213-555313:1:exon
so has part: feature:561321-561418:1:exon
so has part: feature:562741-562830:1:exon
so has part: feature:564311-564401:1:exon
so has part: feature:565241-565384:1:exon
so has part: feature:566333-566450:1:exon
so has part: feature:566898-567031:1:exon
so has part: feature:569242-569288:1:exon
so has part: feature:570304-570409:1:exon
so has part: feature:571185-571289:1:exon
so has part: feature:572313-572360:1:exon
so has part: feature:573690-573740:1:exon
so has part: feature:576708-576794:1:exon

XP_032869338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536606-536908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542672-542802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548798-548916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549786-549945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550657-550801:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551728-551802:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552365-552450:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554180-554349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555213-555313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:561321-561418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562741-562830:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:564311-564401:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:565241-565384:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:566333-566450:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:566898-567031:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:569242-569288:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:570304-570409:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:571185-571289:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:572313-572360:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:573690-573740:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:576708-576794:1:exon

ppp1r12c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ppp1r12c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 12C isoform X2
translation: MSERAGSGVAAAAAVAASEKRRQQLQRWKGSCTDLEAGEPRWRARPGAGARAGAPRRVRFEAAAEFLAACASGDALDAEEMLGGGADVDCANTDGISALHQACIDENLEMVEFLLRQNANVDQSDNEGWTPLHVAVSCGYSEIVECLINHAASIAAVNSDGQLPIDLAEENYMENLLQAEITKQGIDVESARREEEDLLLQHARQWLNSGKIEDISHPKTGANALHVAAAKGYIEVMRLLLQAGFSVAARDKDGWTPLHAAAHWGMEDSCKLLVEHFCDMEAVNNSGQTPFDVADEDILSLLEDLQKKQDDLRTEKEEKMKRAIIETSTQPQQPSTKPRKSSVCRMSSREKISVQDLSKERKTLETLSLDESKKEESSSSSSETEDVSDSDSECETEKKRSSLNDASNVNGTEVLPRVPAVTLAPSGLKYSGPSAKHLVNQDAPPAWQTELRKTSSFVALQDAQITSDKTPLTSIRRSASTPRLGAQWKGKDVAEPRLARVPPTPIGRSLSVPETCAEQLVSSTYQKVKDPNCQQGETTTPTSNVDFKERRKLYLTPVRDEESESQRKARSRHARQSRRSTQGVTLTDLKEAEKTLGISTEKKTQEQLERREEVKENEGKKERSSLSEDKDAASRLRPVTTGVGNSGSALAPTHSRHSTPTVSFQDADTGAELESDRREEGDADYNSRNRLSVRDRRKARKERRFTGKADSTEEEDGTEQMNSLDTPTHSSLPADQMGDWIESRVGIHSLHSTGARADSNGDFRKMYEMVLSENVRLKEQLRDAQYYLSQANRELERVMKRQQRGDQPARLELERFERRAFERRTAELEERLKILTDLKVDNQRLKDENAALIRVISRLSK
SIO_010081: ppp1r12c
subclass of: SO_0000673
so part of: ppp1r12c
location: join(536606..536908,542672..542802,548798..548916,549786..549945,550657..550801,551728..551802,552365..552450,554180..554349,555216..555313,559496..559675,561321..561418,562741..562830,564311..564401,565241..565384,566333..566450,566898..567031,569242..569288,570304..570409,571185..571289,572313..572360,573690..573740,576708..576794)
location: region:536606-576794:1
so has part: feature:536606-536908:1:exon
so has part: feature:542672-542802:1:exon
so has part: feature:548798-548916:1:exon
so has part: feature:549786-549945:1:exon
so has part: feature:550657-550801:1:exon
so has part: feature:551728-551802:1:exon
so has part: feature:552365-552450:1:exon
so has part: feature:554180-554349:1:exon
so has part: feature:555216-555313:1:exon
so has part: feature:559496-559675:1:exon
so has part: feature:561321-561418:1:exon
so has part: feature:562741-562830:1:exon
so has part: feature:564311-564401:1:exon
so has part: feature:565241-565384:1:exon
so has part: feature:566333-566450:1:exon
so has part: feature:566898-567031:1:exon
so has part: feature:569242-569288:1:exon
so has part: feature:570304-570409:1:exon
so has part: feature:571185-571289:1:exon
so has part: feature:572313-572360:1:exon
so has part: feature:573690-573740:1:exon
so has part: feature:576708-576794:1:exon

XP_032869337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536606-536908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542672-542802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548798-548916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549786-549945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550657-550801:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551728-551802:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552365-552450:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554180-554349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555216-555313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:559496-559675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:561321-561418:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562741-562830:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:564311-564401:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:565241-565384:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:566333-566450:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:566898-567031:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:569242-569288:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:570304-570409:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:571185-571289:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:572313-572360:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:573690-573740:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:576708-576794:1:exon

ppp1r12c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ppp1r12c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 12C isoform X4
translation: MSERAGSGVAAAAAVAASEKRRQQLQRWKGSCTDLEAGEPRWRARPGAGARAGAPRRVRFEAAAEFLAACASGDALDAEEMLGGGADVDCANTDGISALHQACIDENLEMVEFLLRQNANVDQSDNEGWTPLHVAVSCGYSEIVECLINHAASIAAVNSDGQLPIDLAEENYMENLLQAEITKQGIDVESARREEEDLLLQHARQWLNSGKIEDISHPKTGANALHVAAAKGYIEVMRLLLQAGFSVAARDKDGWTPLHAAAHWGMEDSCKLLVEHFCDMEAVNNSGQTPFDVADEDILSLLEDLQKKQDDLRTEKEEKMKRAIIETSTQPQQPSTKPRKSSVCRMSSREKISVQDLSKERKTLETLSLDESKKEESSSSSSETEDVSDSDSECETEKKRSSLNDASNVNGTEVLPRVPAVTLAPSGLKGKDVAEPRLARVPPTPIGRSLSVPETCAEQLVSSTYQKVKDPNCQQGETTTPTSNVDFKERRKLYLTPVRDEESESQRKARSRHARQSRRSTQGVTLTDLKEAEKTLGISTEKKTQEQLERREEVKENEGKKERSSLSEDKDAASRLRPVTTGVGNSGSALAPTHSRHSTPTVSFQDADTGAELESDRREEGDADYNSRNRLSVRDRRKARKERRFTGKADSTEEEDGTEQMNSLDTPTHSSLPADQMGDWIESRVGIHSLHSTGARADSNGDFRKMYEMVLSENVRLKEQLRDAQYYLSQANRELERVMKRQQRGDQPARLELERFERRAFERRTAELEERLKILTDLKVDNQRLKDENAALIRVISRLSK
SIO_010081: ppp1r12c
subclass of: SO_0000673
so part of: ppp1r12c
location: join(536606..536908,542672..542802,548798..548916,549786..549945,550657..550801,551728..551802,552365..552450,554180..554349,555216..555313,561321..561418,562741..562830,564311..564401,565241..565384,566333..566450,566898..567031,569242..569288,570304..570409,571185..571289,572313..572360,573690..573740,576708..576794)
location: region:536606-576794:1
so has part: feature:536606-536908:1:exon
so has part: feature:542672-542802:1:exon
so has part: feature:548798-548916:1:exon
so has part: feature:549786-549945:1:exon
so has part: feature:550657-550801:1:exon
so has part: feature:551728-551802:1:exon
so has part: feature:552365-552450:1:exon
so has part: feature:554180-554349:1:exon
so has part: feature:555216-555313:1:exon
so has part: feature:561321-561418:1:exon
so has part: feature:562741-562830:1:exon
so has part: feature:564311-564401:1:exon
so has part: feature:565241-565384:1:exon
so has part: feature:566333-566450:1:exon
so has part: feature:566898-567031:1:exon
so has part: feature:569242-569288:1:exon
so has part: feature:570304-570409:1:exon
so has part: feature:571185-571289:1:exon
so has part: feature:572313-572360:1:exon
so has part: feature:573690-573740:1:exon
so has part: feature:576708-576794:1:exon

XP_032869339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536606-536908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542672-542802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548798-548916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549786-549945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550657-550801:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551728-551802:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552365-552450:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554180-554349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555216-555313:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:561321-561418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562741-562830:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:564311-564401:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:565241-565384:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:566333-566450:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:566898-567031:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:569242-569288:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:570304-570409:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:571185-571289:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:572313-572360:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:573690-573740:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:576708-576794:1:exon

snrnp70
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: snrnp70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 584592..603318
location: region:584592-603318:1
so has part: feature:584592-603318:1:exon
subclass of: SO_0000010

116967019
type: Gene
SIO_000068: ncbigene

position:584592:1
position: 584592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603318:1
position: 603318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584592-603318:1:exon

snrnp70
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: snrnp70
product: small nuclear ribonucleoprotein U1 subunit 70
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_033013449.1
SIO_010081: snrnp70
subclass of: SO_0000673
so part of: snrnp70
location: join(584592..585193,587029..587091,587998..588052,588541..588605,589751..589813,590887..590968,600583..600684,600827..600914,602038..603318)
location: region:584592-603318:1
so has part: feature:584592-585193:1:exon
so has part: feature:587029-587091:1:exon
so has part: feature:587998-588052:1:exon
so has part: feature:588541-588605:1:exon
so has part: feature:589751-589813:1:exon
so has part: feature:590887-590968:1:exon
so has part: feature:600583-600684:1:exon
so has part: feature:600827-600914:1:exon
so has part: feature:602038-603318:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584592-585193:1:exon

position:585193:1
position: 585193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:587029-587091:1:exon

position:587029:1
position: 587029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587091:1
position: 587091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:587998-588052:1:exon

position:587998:1
position: 587998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588052:1
position: 588052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:588541-588605:1:exon

position:588541:1
position: 588541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588605:1
position: 588605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:589751-589813:1:exon

position:589751:1
position: 589751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589813:1
position: 589813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:590887-590968:1:exon

position:590887:1
position: 590887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590968:1
position: 590968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:600583-600684:1:exon

position:600583:1
position: 600583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600684:1
position: 600684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:600827-600914:1:exon

position:600827:1
position: 600827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600914:1
position: 600914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:602038-603318:1:exon

position:602038:1
position: 602038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

snrnp70
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: snrnp70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U1 small nuclear ribonucleoprotein 70 kDa
translation: MTQFLPPNLLALFAPRDPVPYLPPLEKLPHEKHHSQPYSGIARFVSHFEDPRDAPPPTRAETREERMERKRREKIERRQQEVENELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIYMVYNKRTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIKHSGRDDAPRYDERDRDRERDRDRRECSERSRERDKERERRRTRSRERRRPPRSRSREKEERKVRTSRERSREKDKDKDRDRKRRSRSRERKRERDRDRDKDKKEERTDVEQPEAGDAPHSDPQPVEAVCEPVEPKPETEEKNRERGERDRERDRDKERDRDRDRDRRRSHRDRDKDKDRDRDRRRDRDRDRDRDHKRDRDRDRDRDRNKEADKLQDNGASEQFEEGSLDLYIDLESQPAEGYMLPENGYQMEPPAEGY
SIO_010081: snrnp70
subclass of: SO_0000673
so part of: snrnp70
location: join(585047..585193,587029..587091,587998..588052,588541..588605,589751..589813,590887..590968,600583..600684,600827..600914,602038..602776)
location: region:585047-602776:1
so has part: feature:585047-585193:1:exon
so has part: feature:587029-587091:1:exon
so has part: feature:587998-588052:1:exon
so has part: feature:588541-588605:1:exon
so has part: feature:589751-589813:1:exon
so has part: feature:590887-590968:1:exon
so has part: feature:600583-600684:1:exon
so has part: feature:600827-600914:1:exon
so has part: feature:602038-602776:1:exon

XP_032869340.1
type: Protein
SIO_000068: ncbiprotein

position:585047:1
position: 585047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602776:1
position: 602776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585047-585193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:587029-587091:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587998-588052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588541-588605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589751-589813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:590887-590968:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600583-600684:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600827-600914:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:602038-602776:1:exon

LOC116967020
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116967020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 604242..609626
location: region:604242-609626:1
so has part: feature:604242-609626:1:exon
subclass of: SO_0000010

116967020
type: Gene
SIO_000068: ncbigene

position:604242:1
position: 604242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609626:1
position: 609626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604242-609626:1:exon

LOC116967020
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116967020
product: uncharacterized LOC116967020
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033013450.1
SIO_010081: LOC116967020
subclass of: SO_0000673
so part of: LOC116967020
location: join(604242..604388,605447..605647,606288..606449,607359..607486,608858..609626)
location: region:604242-609626:1
so has part: feature:604242-604388:1:exon
so has part: feature:605447-605647:1:exon
so has part: feature:606288-606449:1:exon
so has part: feature:607359-607486:1:exon
so has part: feature:608858-609626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604242-604388:1:exon

position:604388:1
position: 604388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:605447-605647:1:exon

position:605447:1
position: 605447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605647:1
position: 605647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:606288-606449:1:exon

position:606288:1
position: 606288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606449:1
position: 606449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:607359-607486:1:exon

position:607359:1
position: 607359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607486:1
position: 607486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:608858-609626:1:exon

position:608858:1
position: 608858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116967020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116967020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116967020
translation: MAPERRHDLHLTSAGIGLHYSPGRGFPPSGFRSLLKDPLPPKLKELDITHPDDEVYNCYDTTTGSAHNVKTIDGILGHPRHVKVPNHWDVHYMKDLGEKLSRRDWKTPLNMVNQTSEMKDKYTGRLPQSMDTAFKSGPQPFPLASHLTNGPTKNIVASTENPVMAGKEFYVRDKDVLRLNDIYLSTTNKDFRAFKKTELEGIAKKDIATYWQTEDYPKAWGHGLKENPLPKESQRINRGPGPMIDPSVFSTPTRIPRLPRRLPPVPNRGMKTLFQESYPPPSDVKRTRDIYCPLTAPWVVTREPSTPEILTVPNMYKTQSMAYGSKEPAIV
SIO_010081: LOC116967020
subclass of: SO_0000673
so part of: LOC116967020
location: join(604293..604388,605447..605647,606288..606449,607359..607486,608858..609266)
location: region:604293-609266:1
so has part: feature:604293-604388:1:exon
so has part: feature:605447-605647:1:exon
so has part: feature:606288-606449:1:exon
so has part: feature:607359-607486:1:exon
so has part: feature:608858-609266:1:exon

XP_032869341.1
type: Protein
SIO_000068: ncbiprotein

position:604293:1
position: 604293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609266:1
position: 609266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604293-604388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:605447-605647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:606288-606449:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:607359-607486:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608858-609266:1:exon

LOC116966755
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 613238..615352
location: region:613238-615352:1
so has part: feature:613238-615352:1:exon
subclass of: SO_0000010

116966755
type: Gene
SIO_000068: ncbigene

position:613238:1
position: 613238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615352:1
position: 615352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613238-615352:1:exon

LOC116966755
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966755
product: gonadotropin subunit beta-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 113 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033013074.1
SIO_010081: LOC116966755
subclass of: SO_0000673
so part of: LOC116966755
location: join(613238..613449,615122..615352)
location: region:613238-615352:1
so has part: feature:613238-613449:1:exon
so has part: feature:615122-615352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:613238-613449:1:exon

position:613449:1
position: 613449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615122-615352:1:exon

position:615122:1
position: 615122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116966755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gonadotropin subunit beta-like
translation: MGPTLLLLLVLTNLAQTHHLCRLTNATISAEKDGCPFCVSLTTTVCSGYCPTKESVYKSPLLSVYQHVCTYKALRYESIRLPGCGVRVEPTYTYPVALSCGCNLCKMHNTDCSRQSIMPDFCSSRRLLL
SIO_010081: LOC116966755
subclass of: SO_0000673
so part of: LOC116966755
location: join(613291..613449,615122..615352)
location: region:613291-615352:1
so has part: feature:613291-613449:1:exon
so has part: feature:615122-615352:1:exon

XP_032868965.1
type: Protein
SIO_000068: ncbiprotein

position:613291:1
position: 613291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613291-613449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615122-615352:1:exon

ruvbl2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ruvbl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(616154..626534)
location: region:616154-626534:-1
so has part: feature:616154-626534:-1:exon
subclass of: SO_0000010

116966815
type: Gene
SIO_000068: ncbigene

position:616154:-1
position: 616154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626534:-1
position: 626534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616154-626534:-1:exon

ruvbl2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ruvbl2
product: RuvB like AAA ATPase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033013155.1
SIO_010081: ruvbl2
subclass of: SO_0000673
so part of: ruvbl2
location: complement(join(616154..616314,616944..617058,617227..617356,619186..619305,619392..619510,619738..619832,620690..620813,622358..622451,623323..623429,623662..623728,623832..623961,624067..624208,625116..625171,625905..625959,626472..626534))
location: region:616154-626534:-1
so has part: feature:626472-626534:-1:exon
so has part: feature:625905-625959:-1:exon
so has part: feature:625116-625171:-1:exon
so has part: feature:624067-624208:-1:exon
so has part: feature:623832-623961:-1:exon
so has part: feature:623662-623728:-1:exon
so has part: feature:623323-623429:-1:exon
so has part: feature:622358-622451:-1:exon
so has part: feature:620690-620813:-1:exon
so has part: feature:619738-619832:-1:exon
so has part: feature:619392-619510:-1:exon
so has part: feature:619186-619305:-1:exon
so has part: feature:617227-617356:-1:exon
so has part: feature:616944-617058:-1:exon
so has part: feature:616154-616314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:626472-626534:-1:exon

position:626472:-1
position: 626472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:625905-625959:-1:exon

position:625905:-1
position: 625905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625959:-1
position: 625959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:625116-625171:-1:exon

position:625116:-1
position: 625116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625171:-1
position: 625171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:624067-624208:-1:exon

position:624067:-1
position: 624067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624208:-1
position: 624208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:623832-623961:-1:exon

position:623832:-1
position: 623832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623961:-1
position: 623961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:623662-623728:-1:exon

position:623662:-1
position: 623662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623728:-1
position: 623728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:623323-623429:-1:exon

position:623323:-1
position: 623323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623429:-1
position: 623429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:622358-622451:-1:exon

position:622358:-1
position: 622358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622451:-1
position: 622451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:620690-620813:-1:exon

position:620690:-1
position: 620690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620813:-1
position: 620813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:619738-619832:-1:exon

position:619738:-1
position: 619738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619832:-1
position: 619832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:619392-619510:-1:exon

position:619392:-1
position: 619392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619510:-1
position: 619510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:619186-619305:-1:exon

position:619186:-1
position: 619186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619305:-1
position: 619305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:617227-617356:-1:exon

position:617227:-1
position: 617227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617356:-1
position: 617356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:616944-617058:-1:exon

position:616944:-1
position: 616944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617058:-1
position: 617058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:616154-616314:-1:exon

position:616314:-1
position: 616314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ruvbl2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ruvbl2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ruvB-like 2
translation: MAATPATKVPEVRDVTRIERIGAHSHIRGLGLDDALEPRQVSQGLVGQLSARRAAGVILEMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAQALGQDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGAKVGKLTLKTTEMETIYDLGTKMIECLTKEKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGAQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIECFSFLNRGLESDMAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLVIISTSPYNEKETKQILKIRCEEEDVEMSEEAYTVLTRIGLDSSLRYSIQLISPASLVCKKRKGTEVQMEDIKRVYSLFLDMARSTDCMNKYQDSFMFNEIKGEAMETN
SIO_010081: ruvbl2
subclass of: SO_0000673
so part of: ruvbl2
location: complement(join(616289..616314,616944..617058,617227..617356,619186..619305,619392..619510,619738..619832,620690..620813,622358..622451,623323..623429,623662..623728,623832..623961,624067..624208,625116..625171,625905..625959,626472..626480))
location: region:616289-626480:-1
so has part: feature:626472-626480:-1:exon
so has part: feature:625905-625959:-1:exon
so has part: feature:625116-625171:-1:exon
so has part: feature:624067-624208:-1:exon
so has part: feature:623832-623961:-1:exon
so has part: feature:623662-623728:-1:exon
so has part: feature:623323-623429:-1:exon
so has part: feature:622358-622451:-1:exon
so has part: feature:620690-620813:-1:exon
so has part: feature:619738-619832:-1:exon
so has part: feature:619392-619510:-1:exon
so has part: feature:619186-619305:-1:exon
so has part: feature:617227-617356:-1:exon
so has part: feature:616944-617058:-1:exon
so has part: feature:616289-616314:-1:exon

XP_032869046.1
type: Protein
SIO_000068: ncbiprotein

position:616289:-1
position: 616289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626480:-1
position: 626480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626472-626480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:625905-625959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625116-625171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:624067-624208:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:623832-623961:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:623662-623728:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:623323-623429:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:622358-622451:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:620690-620813:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:619738-619832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:619392-619510:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:619186-619305:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:617227-617356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:616944-617058:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:616289-616314:-1:exon

LOC116966962
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 628113..636196
location: region:628113-636196:1
so has part: feature:628113-636196:1:exon
subclass of: SO_0000010

116966962
type: Gene
SIO_000068: ncbigene

position:628113:1
position: 628113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636196:1
position: 636196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628113-636196:1:exon

LOC116966962
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966962
product: uncharacterized LOC116966962
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033013360.1
SIO_010081: LOC116966962
subclass of: SO_0000673
so part of: LOC116966962
location: join(628113..628226,630755..631255,635158..635328,635943..636196)
location: region:628113-636196:1
so has part: feature:628113-628226:1:exon
so has part: feature:630755-631255:1:exon
so has part: feature:635158-635328:1:exon
so has part: feature:635943-636196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628113-628226:1:exon

position:628226:1
position: 628226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:630755-631255:1:exon

position:630755:1
position: 630755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631255:1
position: 631255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:635158-635328:1:exon

position:635158:1
position: 635158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635328:1
position: 635328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:635943-636196:1:exon

position:635943:1
position: 635943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116966962
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116966962
translation: MLPLARASTILLLCGLVHNAPPPLGMSQTTLNHSYTPSPWRLEIQASLGPGQGSSEPSDGSNTTVSPTVTGSEGGERHSGPAGETATAGAEVTDTSRTEALTTEPWAGTDPTSTVVTTALSGLTSTRAVETHGHASSQMDTSGAGNNSSAILVSKAERQHLKADKGASQSGTLGVFIGLAVVLTLVLGLVYLIYSKTHKDDPFSHQRLYTTDPVLSLDVSVEPADRFYGGLGPALVTDGQGAPHRPTHGALAVPDPPSKAEIQLKPISESSVKLYL
SIO_010081: LOC116966962
subclass of: SO_0000673
so part of: LOC116966962
location: join(630787..631255,635158..635328,635943..636133)
location: region:630787-636133:1
so has part: feature:630787-631255:1:exon
so has part: feature:635158-635328:1:exon
so has part: feature:635943-636133:1:exon

XP_032869251.1
type: Protein
SIO_000068: ncbiprotein

position:630787:1
position: 630787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636133:1
position: 636133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630787-631255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:635158-635328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635943-636133:1:exon

LOC116966961
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 663013..671224
location: region:663013-671224:1
so has part: feature:663013-671224:1:exon
subclass of: SO_0000010

116966961
type: Gene
SIO_000068: ncbigene

position:663013:1
position: 663013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671224:1
position: 671224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663013-671224:1:exon

LOC116966961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966961
product: tumor protein p53-inducible protein 11-like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033013357.1
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(663013..663067,668323..668381,669310..669358,669882..669978,670551..670652,670957..671181)
location: region:663013-671181:1
so has part: feature:663013-663067:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671181:1:exon

position:671181:1
position: 671181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663013-663067:1:exon

position:663067:1
position: 663067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:668323-668381:1:exon

position:668323:1
position: 668323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668381:1
position: 668381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:669310-669358:1:exon

position:669310:1
position: 669310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669358:1
position: 669358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:669882-669978:1:exon

position:669882:1
position: 669882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669978:1
position: 669978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:670551-670652:1:exon

position:670551:1
position: 670551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670652:1
position: 670652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:670957-671181:1:exon

position:670957:1
position: 670957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116966961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966961
product: tumor protein p53-inducible protein 11-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033013355.1
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(663020..663067,666580..666748,668323..668381,669310..669358,669882..669978,670551..670652,670957..671181)
location: region:663020-671181:1
so has part: feature:663020-663067:1:exon
so has part: feature:666580-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671181:1:exon

position:663020:1
position: 663020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663020-663067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666580-666748:1:exon

position:666580:1
position: 666580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666748:1
position: 666748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670551-670652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670957-671181:1:exon

LOC116966961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein p53-inducible protein 11-like isoform X3
translation: MFVAAGISQMLGNEFKFAFHEPFGLRFWQFMSALTFSALGLLTLTFPRSLGARLDTDDGGICVSALRLHGAAMISISLILWSAVWTMEKVIIRWTLLSETCYLAVEFLVTLTASADQDVFSRVAAVQLVAFGLSALLSLFYYVQVGRKPRKV
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(663050..663067,668323..668381,669310..669358,669882..669978,670551..670652,670957..671090)
location: region:663050-671090:1
so has part: feature:663050-663067:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671090:1:exon

XP_032869248.1
type: Protein
SIO_000068: ncbiprotein

position:663050:1
position: 663050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671090:1
position: 671090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663050-663067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670551-670652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670957-671090:1:exon

LOC116966961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966961
product: tumor protein p53-inducible protein 11-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033013351.1
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(663662..663895,666580..666748,668323..668381,669310..669358,669882..669978,670551..670652,670957..671181)
location: region:663662-671181:1
so has part: feature:663662-663895:1:exon
so has part: feature:666580-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671181:1:exon

position:663662:1
position: 663662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663662-663895:1:exon

position:663895:1
position: 663895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:666580-666748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670551-670652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670957-671181:1:exon

LOC116966961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966961
product: tumor protein p53-inducible protein 11-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033013350.1
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(663662..663842,666580..666748,668323..668381,669310..669358,669882..669978,670551..670652,670957..671181)
location: region:663662-671181:1
so has part: feature:663662-663842:1:exon
so has part: feature:666580-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671181:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663662-663842:1:exon

position:663842:1
position: 663842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:666580-666748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670551-670652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670957-671181:1:exon

LOC116966961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966961
product: tumor protein p53-inducible protein 11-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033013354.1
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(663662..663830,666580..666748,668323..668381,669310..669358,669882..669978,670551..670652,670957..671181)
location: region:663662-671181:1
so has part: feature:663662-663830:1:exon
so has part: feature:666580-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671181:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663662-663830:1:exon

position:663830:1
position: 663830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:666580-666748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670551-670652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670957-671181:1:exon

LOC116966961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966961
product: tumor protein p53-inducible protein 11-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033013356.1
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(664514..664707,666580..666748,668323..668381,669310..669358,669882..669978,670957..671181)
location: region:664514-671181:1
so has part: feature:664514-664707:1:exon
so has part: feature:666580-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670957-671181:1:exon

position:664514:1
position: 664514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664514-664707:1:exon

position:664707:1
position: 664707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:666580-666748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670957-671181:1:exon

LOC116966961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966961
product: tumor protein p53-inducible protein 11-like, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033013358.1
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(664517..664707,666580..666748,668323..668381,669310..669358,669882..669978,670551..670594,670957..671091)
location: region:664517-671091:1
so has part: feature:664517-664707:1:exon
so has part: feature:666580-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670594:1:exon
so has part: feature:670957-671091:1:exon

position:664517:1
position: 664517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671091:1
position: 671091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664517-664707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666580-666748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670551-670594:1:exon

position:670594:1
position: 670594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:670957-671091:1:exon

LOC116966961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966961
product: tumor protein p53-inducible protein 11-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033013353.1
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(664522..664707,666580..666748,668323..668381,669310..669358,669882..669978,670551..670652,670957..671100,671137..671224)
location: region:664522-671224:1
so has part: feature:664522-664707:1:exon
so has part: feature:666580-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671100:1:exon
so has part: feature:671137-671224:1:exon

position:664522:1
position: 664522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664522-664707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666580-666748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670551-670652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670957-671100:1:exon

position:671100:1
position: 671100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:671137-671224:1:exon

position:671137:1
position: 671137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116966961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966961
product: tumor protein p53-inducible protein 11-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033013348.1
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(664522..664707,666580..666748,668323..668381,669310..669358,669882..669978,670551..670652,670957..671181)
location: region:664522-671181:1
so has part: feature:664522-664707:1:exon
so has part: feature:666580-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671181:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:664522-664707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666580-666748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670551-670652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670957-671181:1:exon

LOC116966961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966961
product: tumor protein p53-inducible protein 11-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033013352.1
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(664750..665047,666580..666748,668323..668381,669310..669358,669882..669978,670551..670652,670957..671181)
location: region:664750-671181:1
so has part: feature:664750-665047:1:exon
so has part: feature:666580-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671181:1:exon

position:664750:1
position: 664750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664750-665047:1:exon

position:665047:1
position: 665047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:666580-666748:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670551-670652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670957-671181:1:exon

LOC116966961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein p53-inducible protein 11-like isoform X1
translation: MMSVEQHCPLVKKHSQSDLVSRLKSRRVLGMGVKAADGEFHRSKISQMLGNEFKFAFHEPFGLRFWQFMSALTFSALGLLTLTFPRSLGARLDTDDGGICVSALRLHGAAMISISLILWSAVWTMEKVIIRWTLLSETCYLAVEFLVTLTASADQDVFSRVAAVQLVAFGLSALLSLFYYVQVGRKPRKV
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(666617..666748,668323..668381,669310..669358,669882..669978,670551..670652,670957..671090)
location: region:666617-671090:1
so has part: feature:666617-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671090:1:exon

XP_032869239.1
type: Protein
SIO_000068: ncbiprotein

position:666617:1
position: 666617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666617-666748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670551-670652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670957-671090:1:exon

LOC116966961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein p53-inducible protein 11-like isoform X1
translation: MMSVEQHCPLVKKHSQSDLVSRLKSRRVLGMGVKAADGEFHRSKISQMLGNEFKFAFHEPFGLRFWQFMSALTFSALGLLTLTFPRSLGARLDTDDGGICVSALRLHGAAMISISLILWSAVWTMEKVIIRWTLLSETCYLAVEFLVTLTASADQDVFSRVAAVQLVAFGLSALLSLFYYVQVGRKPRKV
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(666617..666748,668323..668381,669310..669358,669882..669978,670551..670652,670957..671090)
location: region:666617-671090:1
so has part: feature:666617-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671090:1:exon

XP_032869241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:666617-666748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670551-670652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670957-671090:1:exon

LOC116966961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein p53-inducible protein 11-like isoform X1
translation: MMSVEQHCPLVKKHSQSDLVSRLKSRRVLGMGVKAADGEFHRSKISQMLGNEFKFAFHEPFGLRFWQFMSALTFSALGLLTLTFPRSLGARLDTDDGGICVSALRLHGAAMISISLILWSAVWTMEKVIIRWTLLSETCYLAVEFLVTLTASADQDVFSRVAAVQLVAFGLSALLSLFYYVQVGRKPRKV
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(666617..666748,668323..668381,669310..669358,669882..669978,670551..670652,670957..671090)
location: region:666617-671090:1
so has part: feature:666617-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671090:1:exon

XP_032869242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:666617-666748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670551-670652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670957-671090:1:exon

LOC116966961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein p53-inducible protein 11-like isoform X1
translation: MMSVEQHCPLVKKHSQSDLVSRLKSRRVLGMGVKAADGEFHRSKISQMLGNEFKFAFHEPFGLRFWQFMSALTFSALGLLTLTFPRSLGARLDTDDGGICVSALRLHGAAMISISLILWSAVWTMEKVIIRWTLLSETCYLAVEFLVTLTASADQDVFSRVAAVQLVAFGLSALLSLFYYVQVGRKPRKV
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(666617..666748,668323..668381,669310..669358,669882..669978,670551..670652,670957..671090)
location: region:666617-671090:1
so has part: feature:666617-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671090:1:exon

XP_032869243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:666617-666748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670551-670652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670957-671090:1:exon

LOC116966961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein p53-inducible protein 11-like isoform X1
translation: MMSVEQHCPLVKKHSQSDLVSRLKSRRVLGMGVKAADGEFHRSKISQMLGNEFKFAFHEPFGLRFWQFMSALTFSALGLLTLTFPRSLGARLDTDDGGICVSALRLHGAAMISISLILWSAVWTMEKVIIRWTLLSETCYLAVEFLVTLTASADQDVFSRVAAVQLVAFGLSALLSLFYYVQVGRKPRKV
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(666617..666748,668323..668381,669310..669358,669882..669978,670551..670652,670957..671090)
location: region:666617-671090:1
so has part: feature:666617-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671090:1:exon

XP_032869244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:666617-666748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670551-670652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670957-671090:1:exon

LOC116966961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein p53-inducible protein 11-like isoform X1
translation: MMSVEQHCPLVKKHSQSDLVSRLKSRRVLGMGVKAADGEFHRSKISQMLGNEFKFAFHEPFGLRFWQFMSALTFSALGLLTLTFPRSLGARLDTDDGGICVSALRLHGAAMISISLILWSAVWTMEKVIIRWTLLSETCYLAVEFLVTLTASADQDVFSRVAAVQLVAFGLSALLSLFYYVQVGRKPRKV
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(666617..666748,668323..668381,669310..669358,669882..669978,670551..670652,670957..671090)
location: region:666617-671090:1
so has part: feature:666617-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671090:1:exon

XP_032869245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:666617-666748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670551-670652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670957-671090:1:exon

LOC116966961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein p53-inducible protein 11-like isoform X1
translation: MMSVEQHCPLVKKHSQSDLVSRLKSRRVLGMGVKAADGEFHRSKISQMLGNEFKFAFHEPFGLRFWQFMSALTFSALGLLTLTFPRSLGARLDTDDGGICVSALRLHGAAMISISLILWSAVWTMEKVIIRWTLLSETCYLAVEFLVTLTASADQDVFSRVAAVQLVAFGLSALLSLFYYVQVGRKPRKV
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(666617..666748,668323..668381,669310..669358,669882..669978,670551..670652,670957..671090)
location: region:666617-671090:1
so has part: feature:666617-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670652:1:exon
so has part: feature:670957-671090:1:exon

XP_032869246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:666617-666748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670551-670652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670957-671090:1:exon

LOC116966961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein p53-inducible protein 11-like isoform X2
translation: MMSVEQHCPLVKKHSQSDLVSRLKSRRVLGMGVKAADGEFHRSKISQMLGNEFKFAFHEPFGLRFWQFMSALTFSALGLLTLTFPRSLGARLDTDDGGICVSALRLHGAAMIMTLTASADQDVFSRVAAVQLVAFGLSALLSLFYYVQVGRKPRKV
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(666617..666748,668323..668381,669310..669358,669882..669978,670957..671090)
location: region:666617-671090:1
so has part: feature:666617-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670957-671090:1:exon

XP_032869247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:666617-666748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670957-671090:1:exon

LOC116966961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein p53-inducible protein 11-like isoform X4
translation: MMSVEQHCPLVKKHSQSDLVSRLKSRRVLGMGVKAADGEFHRSKISQMLGNEFKFAFHEPFGLRFWQFMSALTFSALGLLTLTFPRSLGARLDTDDGGICVSALRLHGAAMISISLILWSAVWTMEK
SIO_010081: LOC116966961
subclass of: SO_0000673
so part of: LOC116966961
location: join(666617..666748,668323..668381,669310..669358,669882..669978,670551..670594,670957..670959)
location: region:666617-670959:1
so has part: feature:666617-666748:1:exon
so has part: feature:668323-668381:1:exon
so has part: feature:669310-669358:1:exon
so has part: feature:669882-669978:1:exon
so has part: feature:670551-670594:1:exon
so has part: feature:670957-670959:1:exon

XP_032869249.1
type: Protein
SIO_000068: ncbiprotein

position:670959:1
position: 670959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666617-666748:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668323-668381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669310-669358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669882-669978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670551-670594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670957-670959:1:exon

LOC116966978
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(673025..684382)
location: region:673025-684382:-1
so has part: feature:673025-684382:-1:exon
subclass of: SO_0000010

116966978
type: Gene
SIO_000068: ncbigene

position:673025:-1
position: 673025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684382:-1
position: 684382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673025-684382:-1:exon

LOC116966978
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966978
product: paired box protein Pax-6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033013387.1
SIO_010081: LOC116966978
subclass of: SO_0000673
so part of: LOC116966978
location: complement(join(673025..673261,674091..674241,676716..676813,681269..681419,682390..682472,683131..683289,684230..684382))
location: region:673025-684382:-1
so has part: feature:684230-684382:-1:exon
so has part: feature:683131-683289:-1:exon
so has part: feature:682390-682472:-1:exon
so has part: feature:681269-681419:-1:exon
so has part: feature:676716-676813:-1:exon
so has part: feature:674091-674241:-1:exon
so has part: feature:673025-673261:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684230-684382:-1:exon

position:684230:-1
position: 684230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:683131-683289:-1:exon

position:683131:-1
position: 683131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683289:-1
position: 683289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:682390-682472:-1:exon

position:682390:-1
position: 682390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682472:-1
position: 682472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:681269-681419:-1:exon

position:681269:-1
position: 681269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681419:-1
position: 681419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:676716-676813:-1:exon

position:676716:-1
position: 676716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676813:-1
position: 676813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:674091-674241:-1:exon

position:674091:-1
position: 674091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674241:-1
position: 674241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:673025-673261:-1:exon

position:673261:-1
position: 673261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116966978
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966978
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired box protein Pax-6-like
translation: MGADGMYDKLRMLNVQPGSWGARSSWYQGGSTAGQAAADSCQQPEVRGESGGGLGVIGEDSDESQIRLQLKRKLQRNRTSFTQDQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRKQACNGPSHVPINSSFSSSLYQSMPQHNTSGPMMSRNEASMTNSYSGLPPMPPFAMTNNLPLQPPVPSQASSYSCMIPASPAVSVHSYDAYNPPHMQSHLNPQPLACTGASSTGLISPGVSVPVQVPGGDQEMAQYWPRLQ
SIO_010081: LOC116966978
subclass of: SO_0000673
so part of: LOC116966978
location: complement(join(673176..673261,674091..674241,676716..676813,681269..681419,682390..682472,683131..683289,684230..684344))
location: region:673176-684344:-1
so has part: feature:684230-684344:-1:exon
so has part: feature:683131-683289:-1:exon
so has part: feature:682390-682472:-1:exon
so has part: feature:681269-681419:-1:exon
so has part: feature:676716-676813:-1:exon
so has part: feature:674091-674241:-1:exon
so has part: feature:673176-673261:-1:exon

XP_032869278.1
type: Protein
SIO_000068: ncbiprotein

position:673176:-1
position: 673176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684344:-1
position: 684344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684230-684344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:683131-683289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:682390-682472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:681269-681419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676716-676813:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:674091-674241:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673176-673261:-1:exon

fbxo47
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: fbxo47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(704107..728986)
location: region:704107-728986:-1
so has part: feature:704107-728986:-1:exon
subclass of: SO_0000010

116966922
type: Gene
SIO_000068: ncbigene

position:704107:-1
position: 704107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728986:-1
position: 728986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704107-728986:-1:exon

fbxo47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fbxo47
product: F-box protein 47
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033013302.1
SIO_010081: fbxo47
subclass of: SO_0000673
so part of: fbxo47
location: complement(join(704107..706625,711252..711411,712052..712194,713142..713285,714102..714278,716932..717040,718355..718432,721971..722047,723494..723655,725115..725319,726264..726384,728905..728986))
location: region:704107-728986:-1
so has part: feature:728905-728986:-1:exon
so has part: feature:726264-726384:-1:exon
so has part: feature:725115-725319:-1:exon
so has part: feature:723494-723655:-1:exon
so has part: feature:721971-722047:-1:exon
so has part: feature:718355-718432:-1:exon
so has part: feature:716932-717040:-1:exon
so has part: feature:714102-714278:-1:exon
so has part: feature:713142-713285:-1:exon
so has part: feature:712052-712194:-1:exon
so has part: feature:711252-711411:-1:exon
so has part: feature:704107-706625:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:728905-728986:-1:exon

position:728905:-1
position: 728905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:726264-726384:-1:exon

position:726264:-1
position: 726264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726384:-1
position: 726384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:725115-725319:-1:exon

position:725115:-1
position: 725115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725319:-1
position: 725319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:723494-723655:-1:exon

position:723494:-1
position: 723494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723655:-1
position: 723655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:721971-722047:-1:exon

position:721971:-1
position: 721971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722047:-1
position: 722047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:718355-718432:-1:exon

position:718355:-1
position: 718355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718432:-1
position: 718432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:716932-717040:-1:exon

position:716932:-1
position: 716932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717040:-1
position: 717040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:714102-714278:-1:exon

position:714102:-1
position: 714102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714278:-1
position: 714278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:713142-713285:-1:exon

position:713142:-1
position: 713142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713285:-1
position: 713285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:712052-712194:-1:exon

position:712052:-1
position: 712052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712194:-1
position: 712194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:711252-711411:-1:exon

position:711252:-1
position: 711252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711411:-1
position: 711411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:704107-706625:-1:exon

position:706625:-1
position: 706625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fbxo47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fbxo47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 47
translation: MKPMERDEAPLRINTFTLIPTQKYRRSCRQLQSKKGGDRLENFHIQYNCGYFQLIPVEIFHKVLCYLSVTDISVLSMASKVVGTQVVGYIATSSGIRRLLLEGFHSTDVSKKSVAMEHYRSLGLLFKRCTLLLPTKERLKFVHNQLLKNPCFRMGGCTMVVQCSGFACFGMLLQTLIAGWDELECHRVFNFLNESANLPRKMQSVVCSRPGATRKLELQIRLFYRRVLLDHWVHQSDIAFWLTRILKPWPMVNQARLLYLLYGPMSINDGQIHWHHMNQIPAGEESIKGLAAAVRLLHENAKEWTADDIFTLLEELAGFPQEWLLENSARLLICCGNNMCFTFLANKAVNGRLNELATLIVFLSLVCEKDGYCMDWTVKMVHRICKVITSSESRWNFLQTIEKVFARVTMDMIESLMFSGLEEDEGVTYNMYNMVNAQAEFHKEIMLHAFSNVLT
SIO_010081: fbxo47
subclass of: SO_0000673
so part of: fbxo47
location: complement(join(706513..706625,711252..711411,712052..712194,713142..713285,714102..714278,716932..717040,718355..718432,721971..722047,723494..723655,725115..725319))
location: region:706513-725319:-1
so has part: feature:725115-725319:-1:exon
so has part: feature:723494-723655:-1:exon
so has part: feature:721971-722047:-1:exon
so has part: feature:718355-718432:-1:exon
so has part: feature:716932-717040:-1:exon
so has part: feature:714102-714278:-1:exon
so has part: feature:713142-713285:-1:exon
so has part: feature:712052-712194:-1:exon
so has part: feature:711252-711411:-1:exon
so has part: feature:706513-706625:-1:exon

XP_032869193.1
type: Protein
SIO_000068: ncbiprotein

position:706513:-1
position: 706513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725115-725319:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723494-723655:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:721971-722047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:718355-718432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:716932-717040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:714102-714278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:713142-713285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:712052-712194:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:711252-711411:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:706513-706625:-1:exon

LOC116966918
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 729854..742387
location: region:729854-742387:1
so has part: feature:729854-742387:1:exon
subclass of: SO_0000010

116966918
type: Gene
SIO_000068: ncbigene

position:729854:1
position: 729854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742387:1
position: 742387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729854-742387:1:exon

LOC116966918
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966918
product: reticulocalbin-1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033013294.1
SIO_010081: LOC116966918
subclass of: SO_0000673
so part of: LOC116966918
location: join(729854..729976,731430..731659,733848..734041,736533..736714,737721..737781,739000..739199,740258..740778)
location: region:729854-740778:1
so has part: feature:729854-729976:1:exon
so has part: feature:731430-731659:1:exon
so has part: feature:733848-734041:1:exon
so has part: feature:736533-736714:1:exon
so has part: feature:737721-737781:1:exon
so has part: feature:739000-739199:1:exon
so has part: feature:740258-740778:1:exon

position:740778:1
position: 740778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729854-729976:1:exon

position:729976:1
position: 729976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:731430-731659:1:exon

position:731430:1
position: 731430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731659:1
position: 731659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:733848-734041:1:exon

position:733848:1
position: 733848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734041:1
position: 734041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:736533-736714:1:exon

position:736533:1
position: 736533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736714:1
position: 736714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:737721-737781:1:exon

position:737721:1
position: 737721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737781:1
position: 737781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:739000-739199:1:exon

position:739000:1
position: 739000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739199:1
position: 739199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:740258-740778:1:exon

position:740258:1
position: 740258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116966918
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966918
product: reticulocalbin-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033013293.1
SIO_010081: LOC116966918
subclass of: SO_0000673
so part of: LOC116966918
location: join(730385..730405,731430..731659,733848..734041,736533..736714,737721..737781,739000..739199,741514..742387)
location: region:730385-742387:1
so has part: feature:730385-730405:1:exon
so has part: feature:731430-731659:1:exon
so has part: feature:733848-734041:1:exon
so has part: feature:736533-736714:1:exon
so has part: feature:737721-737781:1:exon
so has part: feature:739000-739199:1:exon
so has part: feature:741514-742387:1:exon

position:730385:1
position: 730385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730385-730405:1:exon

position:730405:1
position: 730405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:731430-731659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:733848-734041:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:736533-736714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:737721-737781:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739000-739199:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741514-742387:1:exon

position:741514:1
position: 741514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116966918
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966918
product: reticulocalbin-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033013292.1
SIO_010081: LOC116966918
subclass of: SO_0000673
so part of: LOC116966918
location: join(730385..730405,731430..731659,733848..734041,736533..736714,737721..737781,739000..739199,740258..740778)
location: region:730385-740778:1
so has part: feature:730385-730405:1:exon
so has part: feature:731430-731659:1:exon
so has part: feature:733848-734041:1:exon
so has part: feature:736533-736714:1:exon
so has part: feature:737721-737781:1:exon
so has part: feature:739000-739199:1:exon
so has part: feature:740258-740778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:730385-730405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:731430-731659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:733848-734041:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:736533-736714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:737721-737781:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739000-739199:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:740258-740778:1:exon

LOC116966918
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calumenin-like isoform X2
translation: MMLMMSRRSLLGLLALCASVAFCKPTSEKKERVHHSKDLDERDPIDQNGFQFDHDAFMGREGSKTFDQLTPEESKERLGKIVDRIDDDQDGLVTADELTSWIKRAQNRYVDDNVKKHWNEYDTNRDGQISWEEYRNATYGFHVDESFSDVSNDEDKASYRKMLKRDVRRFEKADKDGDKVATREEFTAFLHPEEFDYMKPIVVLETIEDIDKDGDGMVDEKEYVGDMYSPVDGESEPDWVKNEQEQFRRFRDLNKDGKMDKEEVERWILPGDYDHAMAEAKHLIHESDKDEDGKLSKEEFLENYNRFVGSAVTNFGELLDNHDEF
SIO_010081: LOC116966918
subclass of: SO_0000673
so part of: LOC116966918
location: join(730400..730405,731430..731659,733848..734041,736533..736714,737721..737781,739000..739199,741514..741618)
location: region:730400-741618:1
so has part: feature:730400-730405:1:exon
so has part: feature:731430-731659:1:exon
so has part: feature:733848-734041:1:exon
so has part: feature:736533-736714:1:exon
so has part: feature:737721-737781:1:exon
so has part: feature:739000-739199:1:exon
so has part: feature:741514-741618:1:exon

XP_032869184.1
type: Protein
SIO_000068: ncbiprotein

position:730400:1
position: 730400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741618:1
position: 741618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730400-730405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:731430-731659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:733848-734041:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:736533-736714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:737721-737781:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739000-739199:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741514-741618:1:exon

LOC116966918
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulocalbin-1-like isoform X1
translation: MMLMMSRRSLLGLLALCASVAFCKPTSEKKERVHHSKDLDERDPIDQNGFQFDHDAFMGREGSKTFDQLTPEESKERLGKIVDRIDDDQDGLVTADELTSWIKRAQNRYVDDNVKKHWNEYDTNRDGQISWEEYRNATYGFHVDESFSDVSNDEDKASYRKMLKRDVRRFEKADKDGDKVATREEFTAFLHPEEFDYMKPIVVLETIEDIDKDGDGMVDEKEYVGDMYSPVDGESEPDWVKNEQEQFRRFRDLNKDGKMDKEEVERWILPGDYDHAMAEAKHLIHESDKDEDSKLTKQEIVNNWNMFVGSQVTNYGEDLTRKHDEF
SIO_010081: LOC116966918
subclass of: SO_0000673
so part of: LOC116966918
location: join(730400..730405,731430..731659,733848..734041,736533..736714,737721..737781,739000..739199,740258..740365)
location: region:730400-740365:1
so has part: feature:730400-730405:1:exon
so has part: feature:731430-731659:1:exon
so has part: feature:733848-734041:1:exon
so has part: feature:736533-736714:1:exon
so has part: feature:737721-737781:1:exon
so has part: feature:739000-739199:1:exon
so has part: feature:740258-740365:1:exon

XP_032869183.1
type: Protein
SIO_000068: ncbiprotein

position:740365:1
position: 740365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730400-730405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:731430-731659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:733848-734041:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:736533-736714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:737721-737781:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739000-739199:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:740258-740365:1:exon

LOC116966918
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulocalbin-1-like isoform X3
translation: MMSRRSLLGLLALCASVAFCKPTSEKKERVHHSKDLDERDPIDQNGFQFDHDAFMGREGSKTFDQLTPEESKERLGKIVDRIDDDQDGLVTADELTSWIKRAQNRYVDDNVKKHWNEYDTNRDGQISWEEYRNATYGFHVDESFSDVSNDEDKASYRKMLKRDVRRFEKADKDGDKVATREEFTAFLHPEEFDYMKPIVVLETIEDIDKDGDGMVDEKEYVGDMYSPVDGESEPDWVKNEQEQFRRFRDLNKDGKMDKEEVERWILPGDYDHAMAEAKHLIHESDKDEDSKLTKQEIVNNWNMFVGSQVTNYGEDLTRKHDEF
SIO_010081: LOC116966918
subclass of: SO_0000673
so part of: LOC116966918
location: join(731433..731659,733848..734041,736533..736714,737721..737781,739000..739199,740258..740365)
location: region:731433-740365:1
so has part: feature:731433-731659:1:exon
so has part: feature:733848-734041:1:exon
so has part: feature:736533-736714:1:exon
so has part: feature:737721-737781:1:exon
so has part: feature:739000-739199:1:exon
so has part: feature:740258-740365:1:exon

XP_032869185.1
type: Protein
SIO_000068: ncbiprotein

position:731433:1
position: 731433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731433-731659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:733848-734041:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:736533-736714:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:737721-737781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:739000-739199:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740258-740365:1:exon

LOC116966920
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(745272..756630)
location: region:745272-756630:-1
so has part: feature:745272-756630:-1:exon
subclass of: SO_0000010

116966920
type: Gene
SIO_000068: ncbigene

position:745272:-1
position: 745272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756630:-1
position: 756630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745272-756630:-1:exon

LOC116966920
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966920
product: nitric oxide synthase interacting protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033013298.1
SIO_010081: LOC116966920
subclass of: SO_0000673
so part of: LOC116966920
location: complement(join(745272..745716,747506..747693,748469..748587,749458..749599,750561..750642,751279..751384,755344..755428,756592..756630))
location: region:745272-756630:-1
so has part: feature:756592-756630:-1:exon
so has part: feature:755344-755428:-1:exon
so has part: feature:751279-751384:-1:exon
so has part: feature:750561-750642:-1:exon
so has part: feature:749458-749599:-1:exon
so has part: feature:748469-748587:-1:exon
so has part: feature:747506-747693:-1:exon
so has part: feature:745272-745716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:756592-756630:-1:exon

position:756592:-1
position: 756592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:755344-755428:-1:exon

position:755344:-1
position: 755344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755428:-1
position: 755428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:751279-751384:-1:exon

position:751279:-1
position: 751279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751384:-1
position: 751384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:750561-750642:-1:exon

position:750561:-1
position: 750561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750642:-1
position: 750642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:749458-749599:-1:exon

position:749458:-1
position: 749458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749599:-1
position: 749599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:748469-748587:-1:exon

position:748469:-1
position: 748469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748587:-1
position: 748587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:747506-747693:-1:exon

position:747506:-1
position: 747506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747693:-1
position: 747693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:745272-745716:-1:exon

position:745716:-1
position: 745716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116966920
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966920
product: nitric oxide synthase interacting protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033013295.1
SIO_010081: LOC116966920
subclass of: SO_0000673
so part of: LOC116966920
location: complement(join(745272..745716,746984..747092,747506..747693,748469..748587,749458..749599,750561..750642,751279..751384,755344..755427,756592..756612))
location: region:745272-756612:-1
so has part: feature:756592-756612:-1:exon
so has part: feature:755344-755427:-1:exon
so has part: feature:751279-751384:-1:exon
so has part: feature:750561-750642:-1:exon
so has part: feature:749458-749599:-1:exon
so has part: feature:748469-748587:-1:exon
so has part: feature:747506-747693:-1:exon
so has part: feature:746984-747092:-1:exon
so has part: feature:745272-745716:-1:exon

position:756612:-1
position: 756612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:756592-756612:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:755344-755427:-1:exon

position:755427:-1
position: 755427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:751279-751384:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:750561-750642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:749458-749599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:748469-748587:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:747506-747693:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:746984-747092:-1:exon

position:746984:-1
position: 746984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747092:-1
position: 747092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:745272-745716:-1:exon

LOC116966920
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966920
product: nitric oxide synthase interacting protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033013296.1
SIO_010081: LOC116966920
subclass of: SO_0000673
so part of: LOC116966920
location: complement(join(745272..745716,746984..747092,747506..747693,748469..748587,749458..749599,750561..750642,751279..751384,755344..755428,756546..756587))
location: region:745272-756587:-1
so has part: feature:756546-756587:-1:exon
so has part: feature:755344-755428:-1:exon
so has part: feature:751279-751384:-1:exon
so has part: feature:750561-750642:-1:exon
so has part: feature:749458-749599:-1:exon
so has part: feature:748469-748587:-1:exon
so has part: feature:747506-747693:-1:exon
so has part: feature:746984-747092:-1:exon
so has part: feature:745272-745716:-1:exon

position:756587:-1
position: 756587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:756546-756587:-1:exon

position:756546:-1
position: 756546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:755344-755428:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751279-751384:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:750561-750642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:749458-749599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:748469-748587:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:747506-747693:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:746984-747092:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:745272-745716:-1:exon

LOC116966920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nitric oxide synthase-interacting protein isoform X1
translation: MTRHGKNCTAGAVYTYYEKKKDTAVSGYGTQSLRLSKDAIKDFDCCCLSLQPCKDPIITPDGYIYEKEAILEYILHQKTEIAKKMKAYEKQKNVKKVELAELAKAEKESKIKAFLEKEMTIVSKPLNPFSSRGGESQAGPSSRASQQEHDKQLPSFWIPSLTPEAKAATLSKPDKTVYCPMSGWPLKMKDLIPVKFLPVDEKLERVQLITKQERYICAVTRDALGNSVPCAVLRPSGAVVTMECVEKLIKHDMVDPINGAKLAEKDIIAIQRGGTGFAGSGVKLEAKESRPVMQA
SIO_010081: LOC116966920
subclass of: SO_0000673
so part of: LOC116966920
location: complement(join(745645..745716,746984..747092,747506..747693,748469..748587,749458..749599,750561..750642,751279..751384,755344..755413))
location: region:745645-755413:-1
so has part: feature:755344-755413:-1:exon
so has part: feature:751279-751384:-1:exon
so has part: feature:750561-750642:-1:exon
so has part: feature:749458-749599:-1:exon
so has part: feature:748469-748587:-1:exon
so has part: feature:747506-747693:-1:exon
so has part: feature:746984-747092:-1:exon
so has part: feature:745645-745716:-1:exon

XP_032869186.1
type: Protein
SIO_000068: ncbiprotein

position:745645:-1
position: 745645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755413:-1
position: 755413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755344-755413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751279-751384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750561-750642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:749458-749599:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748469-748587:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:747506-747693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:746984-747092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:745645-745716:-1:exon

LOC116966920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nitric oxide synthase-interacting protein isoform X1
translation: MTRHGKNCTAGAVYTYYEKKKDTAVSGYGTQSLRLSKDAIKDFDCCCLSLQPCKDPIITPDGYIYEKEAILEYILHQKTEIAKKMKAYEKQKNVKKVELAELAKAEKESKIKAFLEKEMTIVSKPLNPFSSRGGESQAGPSSRASQQEHDKQLPSFWIPSLTPEAKAATLSKPDKTVYCPMSGWPLKMKDLIPVKFLPVDEKLERVQLITKQERYICAVTRDALGNSVPCAVLRPSGAVVTMECVEKLIKHDMVDPINGAKLAEKDIIAIQRGGTGFAGSGVKLEAKESRPVMQA
SIO_010081: LOC116966920
subclass of: SO_0000673
so part of: LOC116966920
location: complement(join(745645..745716,746984..747092,747506..747693,748469..748587,749458..749599,750561..750642,751279..751384,755344..755413))
location: region:745645-755413:-1
so has part: feature:755344-755413:-1:exon
so has part: feature:751279-751384:-1:exon
so has part: feature:750561-750642:-1:exon
so has part: feature:749458-749599:-1:exon
so has part: feature:748469-748587:-1:exon
so has part: feature:747506-747693:-1:exon
so has part: feature:746984-747092:-1:exon
so has part: feature:745645-745716:-1:exon

XP_032869187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:755344-755413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751279-751384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750561-750642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:749458-749599:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748469-748587:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:747506-747693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:746984-747092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:745645-745716:-1:exon

LOC116966920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nitric oxide synthase-interacting protein isoform X2
translation: MTRHGKNCTAGAVYTYYEKKKDTAVSGYGTQSLRLSKDAIKDFDCCCLSLQPCKDPIITPDGYIYEKEAILEYILHQKTEIAKKMKAYEKQKNVKKVELAELAKAEKESKIKAFLEKEMTIVSKPLNPFSSRGGESQAGPSSRASQQEHDKQLPSFWIPSLTPEAKAATLSKPDKTVYCPMSGWPLKMKDLIPVKFLPVDEKLERVQLITKQERYICAVTRDALGNSVPCAVLRPSVGLDLRDLASSWKQRSRGQ
SIO_010081: LOC116966920
subclass of: SO_0000673
so part of: LOC116966920
location: complement(join(745656..745716,747506..747693,748469..748587,749458..749599,750561..750642,751279..751384,755344..755413))
location: region:745656-755413:-1
so has part: feature:755344-755413:-1:exon
so has part: feature:751279-751384:-1:exon
so has part: feature:750561-750642:-1:exon
so has part: feature:749458-749599:-1:exon
so has part: feature:748469-748587:-1:exon
so has part: feature:747506-747693:-1:exon
so has part: feature:745656-745716:-1:exon

XP_032869189.1
type: Protein
SIO_000068: ncbiprotein

position:745656:-1
position: 745656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755344-755413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751279-751384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750561-750642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:749458-749599:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:748469-748587:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:747506-747693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:745656-745716:-1:exon

prrg2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: prrg2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 758559..772095
location: region:758559-772095:1
so has part: feature:758559-772095:1:exon
subclass of: SO_0000010

116966921
type: Gene
SIO_000068: ncbigene

position:758559:1
position: 758559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772095:1
position: 772095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758559-772095:1:exon

prrg2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: prrg2
product: proline rich and Gla domain 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033013300.1
SIO_010081: prrg2
subclass of: SO_0000673
so part of: prrg2
location: join(758559..758776,760903..761043,763239..763392,764435..764598,765495..765534,766706..766835,768183..768353,771072..772095)
location: region:758559-772095:1
so has part: feature:758559-758776:1:exon
so has part: feature:760903-761043:1:exon
so has part: feature:763239-763392:1:exon
so has part: feature:764435-764598:1:exon
so has part: feature:765495-765534:1:exon
so has part: feature:766706-766835:1:exon
so has part: feature:768183-768353:1:exon
so has part: feature:771072-772095:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:758559-758776:1:exon

position:758776:1
position: 758776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:760903-761043:1:exon

position:760903:1
position: 760903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761043:1
position: 761043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:763239-763392:1:exon

position:763239:1
position: 763239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763392:1
position: 763392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:764435-764598:1:exon

position:764435:1
position: 764435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764598:1
position: 764598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:765495-765534:1:exon

position:765495:1
position: 765495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765534:1
position: 765534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:766706-766835:1:exon

position:766706:1
position: 766706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766835:1
position: 766835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:768183-768353:1:exon

position:768183:1
position: 768183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768353:1
position: 768353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:771072-772095:1:exon

position:771072:1
position: 771072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

prrg2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: prrg2
product: proline rich and Gla domain 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033013301.1
SIO_010081: prrg2
subclass of: SO_0000673
so part of: prrg2
location: join(758559..758776,760914..761043,763239..763392,764435..764598,765495..765534,766706..766835,768183..768353,771072..772095)
location: region:758559-772095:1
so has part: feature:758559-758776:1:exon
so has part: feature:760914-761043:1:exon
so has part: feature:763239-763392:1:exon
so has part: feature:764435-764598:1:exon
so has part: feature:765495-765534:1:exon
so has part: feature:766706-766835:1:exon
so has part: feature:768183-768353:1:exon
so has part: feature:771072-772095:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:758559-758776:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:760914-761043:1:exon

position:760914:1
position: 760914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:763239-763392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:764435-764598:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765495-765534:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766706-766835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:768183-768353:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:771072-772095:1:exon

prrg2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: prrg2
product: proline rich and Gla domain 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033013299.1
SIO_010081: prrg2
subclass of: SO_0000673
so part of: prrg2
location: join(758560..758776,763239..763392,764435..764598,765495..765534,766706..766835,768183..768353,771072..772095)
location: region:758560-772095:1
so has part: feature:758560-758776:1:exon
so has part: feature:763239-763392:1:exon
so has part: feature:764435-764598:1:exon
so has part: feature:765495-765534:1:exon
so has part: feature:766706-766835:1:exon
so has part: feature:768183-768353:1:exon
so has part: feature:771072-772095:1:exon

position:758560:1
position: 758560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758560-758776:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:763239-763392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:764435-764598:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765495-765534:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:766706-766835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:768183-768353:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:771072-772095:1:exon

prrg2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: prrg2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane gamma-carboxyglutamic acid protein 2
translation: MVPSSLGFVLLVVWALASPRCADARALTQRGDAAGEVFLDEDEAALFLGRRLLYNSWDFEFITPGDIERECYEEVCNFEEAHEVFENNEQALAFWNKYKESQQPGSPTAHRFDVAGLVAGLIGGFIVLILAGLLVVYFCKRDGKRTDRPPTYRGQAQDMSRPPAEGPGEEVPLATLGDDAPALPSYEDALRRAGHHDASPPPYASGSTREHQPS
SIO_010081: prrg2
subclass of: SO_0000673
so part of: prrg2
location: join(763284..763392,764435..764598,765495..765534,766706..766835,768183..768353,771072..771102)
location: region:763284-771102:1
so has part: feature:763284-763392:1:exon
so has part: feature:764435-764598:1:exon
so has part: feature:765495-765534:1:exon
so has part: feature:766706-766835:1:exon
so has part: feature:768183-768353:1:exon
so has part: feature:771072-771102:1:exon

XP_032869190.1
type: Protein
SIO_000068: ncbiprotein

position:763284:1
position: 763284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771102:1
position: 771102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763284-763392:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:764435-764598:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:765495-765534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:766706-766835:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:768183-768353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:771072-771102:1:exon

prrg2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: prrg2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane gamma-carboxyglutamic acid protein 2
translation: MVPSSLGFVLLVVWALASPRCADARALTQRGDAAGEVFLDEDEAALFLGRRLLYNSWDFEFITPGDIERECYEEVCNFEEAHEVFENNEQALAFWNKYKESQQPGSPTAHRFDVAGLVAGLIGGFIVLILAGLLVVYFCKRDGKRTDRPPTYRGQAQDMSRPPAEGPGEEVPLATLGDDAPALPSYEDALRRAGHHDASPPPYASGSTREHQPS
SIO_010081: prrg2
subclass of: SO_0000673
so part of: prrg2
location: join(763284..763392,764435..764598,765495..765534,766706..766835,768183..768353,771072..771102)
location: region:763284-771102:1
so has part: feature:763284-763392:1:exon
so has part: feature:764435-764598:1:exon
so has part: feature:765495-765534:1:exon
so has part: feature:766706-766835:1:exon
so has part: feature:768183-768353:1:exon
so has part: feature:771072-771102:1:exon

XP_032869191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:763284-763392:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:764435-764598:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:765495-765534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:766706-766835:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:768183-768353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:771072-771102:1:exon

prrg2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: prrg2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane gamma-carboxyglutamic acid protein 2
translation: MVPSSLGFVLLVVWALASPRCADARALTQRGDAAGEVFLDEDEAALFLGRRLLYNSWDFEFITPGDIERECYEEVCNFEEAHEVFENNEQALAFWNKYKESQQPGSPTAHRFDVAGLVAGLIGGFIVLILAGLLVVYFCKRDGKRTDRPPTYRGQAQDMSRPPAEGPGEEVPLATLGDDAPALPSYEDALRRAGHHDASPPPYASGSTREHQPS
SIO_010081: prrg2
subclass of: SO_0000673
so part of: prrg2
location: join(763284..763392,764435..764598,765495..765534,766706..766835,768183..768353,771072..771102)
location: region:763284-771102:1
so has part: feature:763284-763392:1:exon
so has part: feature:764435-764598:1:exon
so has part: feature:765495-765534:1:exon
so has part: feature:766706-766835:1:exon
so has part: feature:768183-768353:1:exon
so has part: feature:771072-771102:1:exon

XP_032869192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:763284-763392:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:764435-764598:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:765495-765534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:766706-766835:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:768183-768353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:771072-771102:1:exon

prr12
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: prr12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 779300..817536
location: region:779300-817536:1
so has part: feature:779300-817536:1:exon
subclass of: SO_0000010

116966994
type: Gene
SIO_000068: ncbigene

position:779300:1
position: 779300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817536:1
position: 817536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779300-817536:1:exon

prr12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: prr12
product: proline rich 12
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033013412.1
SIO_010081: prr12
subclass of: SO_0000673
so part of: prr12
location: join(779300..779718,795295..795407,796231..796392,797066..800488,802908..803427,805002..805366,806814..806930,807771..808028,808782..808898,809233..809366,810310..810515,811284..811409,812356..812453,814614..814766,816229..816324,816951..817536)
location: region:779300-817536:1
so has part: feature:779300-779718:1:exon
so has part: feature:795295-795407:1:exon
so has part: feature:796231-796392:1:exon
so has part: feature:797066-800488:1:exon
so has part: feature:802908-803427:1:exon
so has part: feature:805002-805366:1:exon
so has part: feature:806814-806930:1:exon
so has part: feature:807771-808028:1:exon
so has part: feature:808782-808898:1:exon
so has part: feature:809233-809366:1:exon
so has part: feature:810310-810515:1:exon
so has part: feature:811284-811409:1:exon
so has part: feature:812356-812453:1:exon
so has part: feature:814614-814766:1:exon
so has part: feature:816229-816324:1:exon
so has part: feature:816951-817536:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:779300-779718:1:exon

position:779718:1
position: 779718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:795295-795407:1:exon

position:795295:1
position: 795295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795407:1
position: 795407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:796231-796392:1:exon

position:796231:1
position: 796231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796392:1
position: 796392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:797066-800488:1:exon

position:797066:1
position: 797066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800488:1
position: 800488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:802908-803427:1:exon

position:802908:1
position: 802908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803427:1
position: 803427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:805002-805366:1:exon

position:805002:1
position: 805002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805366:1
position: 805366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:806814-806930:1:exon

position:806814:1
position: 806814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806930:1
position: 806930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:807771-808028:1:exon

position:807771:1
position: 807771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808028:1
position: 808028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:808782-808898:1:exon

position:808782:1
position: 808782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808898:1
position: 808898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:809233-809366:1:exon

position:809233:1
position: 809233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809366:1
position: 809366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:810310-810515:1:exon

position:810310:1
position: 810310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810515:1
position: 810515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:811284-811409:1:exon

position:811284:1
position: 811284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811409:1
position: 811409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:812356-812453:1:exon

position:812356:1
position: 812356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812453:1
position: 812453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:814614-814766:1:exon

position:814614:1
position: 814614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814766:1
position: 814766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:816229-816324:1:exon

position:816229:1
position: 816229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816324:1
position: 816324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:816951-817536:1:exon

position:816951:1
position: 816951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

prr12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: prr12
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: proline-rich protein 12
translation: MDRNYPASSFGDPLGTGQGWSYDRAASGVKASLVYGGSRSSHPDTDILHRQAYATPHPLQGYAANHHPAGLSGLFETGLHHAGSTTPDASVMNLISALESRGPQPGPSASSLLSQFRTPSWQTAMHTPGPAELFISGAIPGSGTFPSSSALSAYQHPASFSGRSFPVTSSLSLQDATFSPSSNGLLSPHDPLLHIKSSQSSVPSSLAFDRLGSSVLGTGLPTQSSAYRTAQETASRHLQSQFNLLSSPLGPSDQASQLYNTSVFSSAPTAGIERAIPRQDSVIKHYQRPSSAQAQLPASHHSLQHYLSCGGSHGFQQMPRHPTLSCSPLGDQSPVGSEGSQKSSQSRPEHSQSYRPIIQSPGYSSTSTSSKSKSYSASRQVPRSTSTPKCQSISSTGQSHHYSSATPKVSSVISSQPQAYSPGPSQSLLTISQPQSYNVTQAQNMSAVTQSQGFASSQSQEMSSGNKSRSYSPAQLPGLASVAPIQSYSVQSEPHSTAGQSYVPAHSQGMPTASPSLSYATGHSPALSTHGPSIVYSSASHVQSMPDTSPSQIIRPLQSPGGSRSQSVSSPGQPQKYLSSVLSPSYIQPSHSQGFQSPQPPLERTPSYGKNKSDSDLLSSERTDDEDFLIQHLLDSESPPRVSSQSLGECEDRAPKGMVYQMSKSEERYHLQSVIRTSSSLDNQVLEMSLQGLKEKKKGERSKEYVRSSSEGLATTVVHYSHQANSIDSLAQDIKKSVDHLQTSHLEAHAKELGQSHGFLQKGGDQSSRPHRLVPDGSQMEQHGMLQGQQGQQMMLDASPEMQLPLNHPASSQSSQLLQSVLTHTQSQLQAQQQQQQQRKVQPALDVRLLESQRLHSEAASPQMQMLEVHLQNQQMQGHVRSHPSLISGEPRSPRMSGDRMQPEGMSQSESMQSQDMQEYLEPDLHLESHLSQGGQVSAQQHLMPESNESLPEDQQQVEGKDQYSAASPQSTKSRFVPLTSICFPDSLLQDEERNFFPGMEDMFCSAPCGGEEYSKHAAEDSGQSMDRSEGMKTSYDMIHSNQSYSSYCPSDTGNGQAVHLDLDSVSMKSELEPSLQTEPQGLGPPHSQQTNVPPDIKSPLTTASFCSMKNKKFLKTSSLHLLKKKDSPPQMPKKTYAQEYEFEDEEKEDVPADIRLNNRRLPDLLPDLISSCRARTSISPVVDIDFCSGNLNGGKKRPKRASKPKEKGPPRPRGRPRIRPLEQPQGPVQDAPKKRGRGRGRGKKTAEGDNEGFKVEKQAKCGMGKFQGSKASDLLPVEVTEALPLDGVLENSQTQEKIKKKIKEVEEQQPEMKSGFMASFLDFLKSGKRQQLPATTSGSQKGRLSSVINQASAASFGLAQSMLSGPLDASESDSLMSCTSPCKRFDEDLKKNLETLPSFSSDEEDSVSKNQDLQKSITSAISALYDPVDRKETDNPENMAVEDKEVSSCPSEVSQPEQVAPLSPDFPKEPLPEEEPSPAPESPPSPPPPPSPPPPPPPPPPPLPEEQDPPSPVKLAKAQDSVAICGETDEEDDESGGEGAIRKWDEFVIKMDDIKELKLAMQMGSEPPTIWRVQKASLQQFLPLVRDGQRHYASSTQYVEYPEEVKSEYQRLYVKFLENVEKRDYVRVCSKKPWHRPLHLAKRQDTAAIAGETDEDEEESGGEGVFRERDEFVVKIDDIKALKLAMQAGREPPPVWRVQKALLQKFTPEIRDGQRQFCATSKYLGYFGHAKNEYQRLYVKFLENVNKKDYVRVCSKKPWHRPQQSLRRQNQGKSAPTRLPVVVAKPEPVVKPAPKTKQRPAKTKAEPPPKKRKKWLKEVVSSSESDSPGQPQSEEERVPTGRVLNTRAMKEMYKSYIELLVSAALDPAMIETIEANNDELYLPTMKKIDSILTEHKKRVTKRVSLSSSLQEGLQTFPQLVVGDSDADHKDNPSSSVKLKVAGTPYNRKTLNQLKKNVQRPQDFQVEADKLQFYTLFHSLHHYKYHTLLHCKGQTDTLTE…
SIO_010081: prr12
subclass of: SO_0000673
so part of: prr12
location: join(779624..779718,795295..795407,796231..796392,797066..800488,802908..803427,805002..805366,806814..806930,807771..808028,808782..808898,809233..809366,810310..810515,811284..811409,812356..812453,814614..814766,816229..816324,816951..817091)
location: region:779624-817091:1
so has part: feature:779624-779718:1:exon
so has part: feature:795295-795407:1:exon
so has part: feature:796231-796392:1:exon
so has part: feature:797066-800488:1:exon
so has part: feature:802908-803427:1:exon
so has part: feature:805002-805366:1:exon
so has part: feature:806814-806930:1:exon
so has part: feature:807771-808028:1:exon
so has part: feature:808782-808898:1:exon
so has part: feature:809233-809366:1:exon
so has part: feature:810310-810515:1:exon
so has part: feature:811284-811409:1:exon
so has part: feature:812356-812453:1:exon
so has part: feature:814614-814766:1:exon
so has part: feature:816229-816324:1:exon
so has part: feature:816951-817091:1:exon

XP_032869303.1
type: Protein
SIO_000068: ncbiprotein

position:779624:1
position: 779624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817091:1
position: 817091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779624-779718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:795295-795407:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:796231-796392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:797066-800488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:802908-803427:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:805002-805366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:806814-806930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807771-808028:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:808782-808898:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:809233-809366:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:810310-810515:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:811284-811409:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:812356-812453:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:814614-814766:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:816229-816324:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:816951-817091:1:exon

LOC116966995
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(792781..818515)
location: region:792781-818515:-1
so has part: feature:792781-818515:-1:exon
subclass of: SO_0000011

116966995
type: Gene
SIO_000068: ncbigene

position:792781:-1
position: 792781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818515:-1
position: 818515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:792781-818515:-1:exon

LOC116966995
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116966995
product: uncharacterized LOC116966995
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004410110.1
SIO_010081: LOC116966995
subclass of: SO_0000673
so part of: LOC116966995
location: complement(join(792781..792791,811060..811070,818214..818515))
location: region:792781-818515:-1
so has part: feature:818214-818515:-1:exon
so has part: feature:811060-811070:-1:exon
so has part: feature:792781-792791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:818214-818515:-1:exon

position:818214:-1
position: 818214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:811060-811070:-1:exon

position:811060:-1
position: 811060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811070:-1
position: 811070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:792781-792791:-1:exon

position:792791:-1
position: 792791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

med25
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: med25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 828362..853055
location: region:828362-853055:1
so has part: feature:828362-853055:1:exon
subclass of: SO_0000010

116967013
type: Gene
SIO_000068: ncbigene

position:828362:1
position: 828362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853055:1
position: 853055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828362-853055:1:exon

med25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: med25
product: mediator complex subunit 25, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033013435.1
SIO_010081: med25
subclass of: SO_0000673
so part of: med25
location: join(828362..828426,831998..832235,833602..833647,835151..835275,836509..836607,837365..837485,840195..840351,841134..841303,842264..842372,843217..843440,844515..844634,845913..845998,846696..846753,847838..847945,848711..848899,849273..849371,851071..851154,851352..851540,852179..852380,852764..853055)
location: region:828362-853055:1
so has part: feature:828362-828426:1:exon
so has part: feature:831998-832235:1:exon
so has part: feature:833602-833647:1:exon
so has part: feature:835151-835275:1:exon
so has part: feature:836509-836607:1:exon
so has part: feature:837365-837485:1:exon
so has part: feature:840195-840351:1:exon
so has part: feature:841134-841303:1:exon
so has part: feature:842264-842372:1:exon
so has part: feature:843217-843440:1:exon
so has part: feature:844515-844634:1:exon
so has part: feature:845913-845998:1:exon
so has part: feature:846696-846753:1:exon
so has part: feature:847838-847945:1:exon
so has part: feature:848711-848899:1:exon
so has part: feature:849273-849371:1:exon
so has part: feature:851071-851154:1:exon
so has part: feature:851352-851540:1:exon
so has part: feature:852179-852380:1:exon
so has part: feature:852764-853055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:828362-828426:1:exon

position:828426:1
position: 828426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:831998-832235:1:exon

position:831998:1
position: 831998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832235:1
position: 832235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:833602-833647:1:exon

position:833602:1
position: 833602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833647:1
position: 833647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:835151-835275:1:exon

position:835151:1
position: 835151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835275:1
position: 835275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:836509-836607:1:exon

position:836509:1
position: 836509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836607:1
position: 836607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:837365-837485:1:exon

position:837365:1
position: 837365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837485:1
position: 837485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:840195-840351:1:exon

position:840195:1
position: 840195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840351:1
position: 840351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:841134-841303:1:exon

position:841134:1
position: 841134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841303:1
position: 841303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:842264-842372:1:exon

position:842264:1
position: 842264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842372:1
position: 842372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:843217-843440:1:exon

position:843217:1
position: 843217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843440:1
position: 843440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:844515-844634:1:exon

position:844515:1
position: 844515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844634:1
position: 844634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:845913-845998:1:exon

position:845913:1
position: 845913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845998:1
position: 845998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:846696-846753:1:exon

position:846696:1
position: 846696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846753:1
position: 846753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:847838-847945:1:exon

position:847838:1
position: 847838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847945:1
position: 847945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:848711-848899:1:exon

position:848711:1
position: 848711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848899:1
position: 848899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:849273-849371:1:exon

position:849273:1
position: 849273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849371:1
position: 849371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:851071-851154:1:exon

position:851071:1
position: 851071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851154:1
position: 851154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:851352-851540:1:exon

position:851352:1
position: 851352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851540:1
position: 851540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:852179-852380:1:exon

position:852179:1
position: 852179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852380:1
position: 852380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:852764-853055:1:exon

position:852764:1
position: 852764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

med25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: med25
product: mediator complex subunit 25, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033013439.1
SIO_010081: med25
subclass of: SO_0000673
so part of: med25
location: join(828362..828426,831998..832235,833602..833647,835151..835275,836509..836607,837365..837485,840195..840351,841134..841303,842264..842372,843217..843440,844515..844634,845913..845998,846696..846753,847838..847945,848711..848899,849273..849371,851071..851154,851352..851540,852185..852380,852764..853055)
location: region:828362-853055:1
so has part: feature:828362-828426:1:exon
so has part: feature:831998-832235:1:exon
so has part: feature:833602-833647:1:exon
so has part: feature:835151-835275:1:exon
so has part: feature:836509-836607:1:exon
so has part: feature:837365-837485:1:exon
so has part: feature:840195-840351:1:exon
so has part: feature:841134-841303:1:exon
so has part: feature:842264-842372:1:exon
so has part: feature:843217-843440:1:exon
so has part: feature:844515-844634:1:exon
so has part: feature:845913-845998:1:exon
so has part: feature:846696-846753:1:exon
so has part: feature:847838-847945:1:exon
so has part: feature:848711-848899:1:exon
so has part: feature:849273-849371:1:exon
so has part: feature:851071-851154:1:exon
so has part: feature:851352-851540:1:exon
so has part: feature:852185-852380:1:exon
so has part: feature:852764-853055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:828362-828426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831998-832235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833602-833647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835151-835275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836509-836607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:837365-837485:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:840195-840351:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:841134-841303:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:842264-842372:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:843217-843440:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:844515-844634:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:845913-845998:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:846696-846753:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:847838-847945:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:848711-848899:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:849273-849371:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:851071-851154:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:851352-851540:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:852185-852380:1:exon

position:852185:1
position: 852185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:852764-853055:1:exon

med25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: med25
product: mediator complex subunit 25, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033013436.1
SIO_010081: med25
subclass of: SO_0000673
so part of: med25
location: join(828362..828426,831998..832235,833602..833647,835151..835275,836509..836607,837365..837485,840195..840351,841134..841303,842264..842372,843217..843440,844515..844634,845913..845998,846696..846753,847838..847945,848711..848899,849273..849365,851068..851154,851352..851540,852179..852380,852764..853055)
location: region:828362-853055:1
so has part: feature:828362-828426:1:exon
so has part: feature:831998-832235:1:exon
so has part: feature:833602-833647:1:exon
so has part: feature:835151-835275:1:exon
so has part: feature:836509-836607:1:exon
so has part: feature:837365-837485:1:exon
so has part: feature:840195-840351:1:exon
so has part: feature:841134-841303:1:exon
so has part: feature:842264-842372:1:exon
so has part: feature:843217-843440:1:exon
so has part: feature:844515-844634:1:exon
so has part: feature:845913-845998:1:exon
so has part: feature:846696-846753:1:exon
so has part: feature:847838-847945:1:exon
so has part: feature:848711-848899:1:exon
so has part: feature:849273-849365:1:exon
so has part: feature:851068-851154:1:exon
so has part: feature:851352-851540:1:exon
so has part: feature:852179-852380:1:exon
so has part: feature:852764-853055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:828362-828426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831998-832235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833602-833647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835151-835275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836509-836607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:837365-837485:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:840195-840351:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:841134-841303:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:842264-842372:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:843217-843440:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:844515-844634:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:845913-845998:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:846696-846753:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:847838-847945:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:848711-848899:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:849273-849365:1:exon

position:849365:1
position: 849365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:851068-851154:1:exon

position:851068:1
position: 851068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:851352-851540:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:852179-852380:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:852764-853055:1:exon

med25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: med25
product: mediator complex subunit 25, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033013437.1
SIO_010081: med25
subclass of: SO_0000673
so part of: med25
location: join(828362..828426,831998..832235,833602..833647,835151..835275,836509..836607,837365..837485,840195..840351,841134..841303,842264..842372,843217..843440,844515..844634,845913..845998,846696..846753,847838..847945,848711..848899,849276..849371,851071..851154,851352..851540,852179..852380,852764..853055)
location: region:828362-853055:1
so has part: feature:828362-828426:1:exon
so has part: feature:831998-832235:1:exon
so has part: feature:833602-833647:1:exon
so has part: feature:835151-835275:1:exon
so has part: feature:836509-836607:1:exon
so has part: feature:837365-837485:1:exon
so has part: feature:840195-840351:1:exon
so has part: feature:841134-841303:1:exon
so has part: feature:842264-842372:1:exon
so has part: feature:843217-843440:1:exon
so has part: feature:844515-844634:1:exon
so has part: feature:845913-845998:1:exon
so has part: feature:846696-846753:1:exon
so has part: feature:847838-847945:1:exon
so has part: feature:848711-848899:1:exon
so has part: feature:849276-849371:1:exon
so has part: feature:851071-851154:1:exon
so has part: feature:851352-851540:1:exon
so has part: feature:852179-852380:1:exon
so has part: feature:852764-853055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:828362-828426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831998-832235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833602-833647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835151-835275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836509-836607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:837365-837485:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:840195-840351:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:841134-841303:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:842264-842372:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:843217-843440:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:844515-844634:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:845913-845998:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:846696-846753:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:847838-847945:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:848711-848899:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:849276-849371:1:exon

position:849276:1
position: 849276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:851071-851154:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:851352-851540:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:852179-852380:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:852764-853055:1:exon

med25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: med25
product: mediator complex subunit 25, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033013438.1
SIO_010081: med25
subclass of: SO_0000673
so part of: med25
location: join(828362..828426,831998..832235,833602..833647,835151..835275,836509..836607,837365..837485,840195..840351,841134..841303,842264..842372,843217..843440,844515..844634,845913..845998,846696..846753,847838..847945,848711..848899,849276..849365,851068..851154,851352..851540,852179..852380,852764..853055)
location: region:828362-853055:1
so has part: feature:828362-828426:1:exon
so has part: feature:831998-832235:1:exon
so has part: feature:833602-833647:1:exon
so has part: feature:835151-835275:1:exon
so has part: feature:836509-836607:1:exon
so has part: feature:837365-837485:1:exon
so has part: feature:840195-840351:1:exon
so has part: feature:841134-841303:1:exon
so has part: feature:842264-842372:1:exon
so has part: feature:843217-843440:1:exon
so has part: feature:844515-844634:1:exon
so has part: feature:845913-845998:1:exon
so has part: feature:846696-846753:1:exon
so has part: feature:847838-847945:1:exon
so has part: feature:848711-848899:1:exon
so has part: feature:849276-849365:1:exon
so has part: feature:851068-851154:1:exon
so has part: feature:851352-851540:1:exon
so has part: feature:852179-852380:1:exon
so has part: feature:852764-853055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:828362-828426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831998-832235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833602-833647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835151-835275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836509-836607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:837365-837485:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:840195-840351:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:841134-841303:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:842264-842372:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:843217-843440:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:844515-844634:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:845913-845998:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:846696-846753:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:847838-847945:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:848711-848899:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:849276-849365:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:851068-851154:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:851352-851540:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:852179-852380:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:852764-853055:1:exon

med25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: med25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 25 isoform X1
translation: MVVPLNDTPSPSSMVSDVVFVIEGTANLGPYFESLRNHYILPAIEYFNDGPPAETDFGGDYGGTQYSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDSIQFMGGGGESCSLIAEGLSTALQLFDDFKKMREQIGQTRKICVLICNSPPYLLSAVESTTYSGLTTDRLVQMIGDRGIHFSVVSPRKLPALRVLFEKAALGGVIETQLKDYSQDPRHMIMIRGIVLPGGGTVAANTVPQKPIPPQPPMQPQPSLLSSQSQASQQSQSQPPSQPQAMPSISQPYQGPVATGSLAGAQAAAQIALETATNQAKAAVVPATNRFPAVNQIAPASGAGAMISQASSQTLAPSPVASLAKVIPSNTSLMTAAAAVAQSGLVSTVTTGIPQTTPQAPPQSLTVGVGTSSGNVCGVTVAPTPPPGSVANKILAWNGVLEWQEKPKPSPADMNAKLTRSLPCQVYVNPGENLKTDQWPQKLIMQLIPQQLLTTLGHLFRNSRMVQFQFTNKDLESLKGLYRIMANGFAGCVHFPHSAPCEVRVLMLLYSSKKKIFMGLIPNDQSGFVNGIRLVITNHKKAQQQKIEQQRSQLGGSQPMAAGPIPNVGFMQKPPGAMPVQQQQQMPGQSVATSIPQVHTVTTLDDQQRQQNLQQQMQLRVQQQQQQQQQQAATQQQSSGPPPNQPAATQQAGTLLRPPNPGANPQLRSLLLSQQTSQSGGPQPGQPMHHIQQQASQMMPHQSMGQPMPHHPQGQQLQMPGQQLMHQGGQPWGNQMAQRPPLQGQMMMSAGPRGPVPPAGMQQGTSLLEEEILMDLI
SIO_010081: med25
subclass of: SO_0000673
so part of: med25
location: join(832102..832235,833602..833647,835151..835275,836509..836607,837365..837485,840195..840351,841134..841303,842264..842372,843217..843440,844515..844634,845913..845998,846696..846753,847838..847945,848711..848899,849273..849371,851071..851154,851352..851540,852179..852380,852764..852867)
location: region:832102-852867:1
so has part: feature:832102-832235:1:exon
so has part: feature:833602-833647:1:exon
so has part: feature:835151-835275:1:exon
so has part: feature:836509-836607:1:exon
so has part: feature:837365-837485:1:exon
so has part: feature:840195-840351:1:exon
so has part: feature:841134-841303:1:exon
so has part: feature:842264-842372:1:exon
so has part: feature:843217-843440:1:exon
so has part: feature:844515-844634:1:exon
so has part: feature:845913-845998:1:exon
so has part: feature:846696-846753:1:exon
so has part: feature:847838-847945:1:exon
so has part: feature:848711-848899:1:exon
so has part: feature:849273-849371:1:exon
so has part: feature:851071-851154:1:exon
so has part: feature:851352-851540:1:exon
so has part: feature:852179-852380:1:exon
so has part: feature:852764-852867:1:exon

XP_032869326.1
type: Protein
SIO_000068: ncbiprotein

position:832102:1
position: 832102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852867:1
position: 852867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:832102-832235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:833602-833647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835151-835275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836509-836607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837365-837485:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:840195-840351:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:841134-841303:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:842264-842372:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:843217-843440:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:844515-844634:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:845913-845998:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:846696-846753:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847838-847945:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:848711-848899:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:849273-849371:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851071-851154:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:851352-851540:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:852179-852380:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:852764-852867:1:exon

med25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: med25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 25 isoform X5
translation: MVVPLNDTPSPSSMVSDVVFVIEGTANLGPYFESLRNHYILPAIEYFNDGPPAETDFGGDYGGTQYSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDSIQFMGGGGESCSLIAEGLSTALQLFDDFKKMREQIGQTRKICVLICNSPPYLLSAVESTTYSGLTTDRLVQMIGDRGIHFSVVSPRKLPALRVLFEKAALGGVIETQLKDYSQDPRHMIMIRGIVLPGGGTVAANTVPQKPIPPQPPMQPQPSLLSSQSQASQQSQSQPPSQPQAMPSISQPYQGPVATGSLAGAQAAAQIALETATNQAKAAVVPATNRFPAVNQIAPASGAGAMISQASSQTLAPSPVASLAKVIPSNTSLMTAAAAVAQSGLVSTVTTGIPQTTPQAPPQSLTVGVGTSSGNVCGVTVAPTPPPGSVANKILAWNGVLEWQEKPKPSPADMNAKLTRSLPCQVYVNPGENLKTDQWPQKLIMQLIPQQLLTTLGHLFRNSRMVQFQFTNKDLESLKGLYRIMANGFAGCVHFPHSAPCEVRVLMLLYSSKKKIFMGLIPNDQSGFVNGIRLVITNHKKAQQQKIEQQRSQLGGSQPMAAGPIPNVGFMQKPPGAMPVQQQQQMPGQSVATSIPQVHTVTTLDDQQRQQNLQQQMQLRVQQQQQQQQQQAATQQQSSGPPPNQPAATQQAGTLLRPPNPGANPQLRSLLLSQQTSGGPQPGQPMHHIQQQASQMMPHQSMGQPMPHHPQGQQLQMPGQQLMHQGGQPWGNQMAQRPPLQGQMMMSAGPRGPVPPAGMQQGTSLLEEEILMDLI
SIO_010081: med25
subclass of: SO_0000673
so part of: med25
location: join(832102..832235,833602..833647,835151..835275,836509..836607,837365..837485,840195..840351,841134..841303,842264..842372,843217..843440,844515..844634,845913..845998,846696..846753,847838..847945,848711..848899,849273..849371,851071..851154,851352..851540,852185..852380,852764..852867)
location: region:832102-852867:1
so has part: feature:832102-832235:1:exon
so has part: feature:833602-833647:1:exon
so has part: feature:835151-835275:1:exon
so has part: feature:836509-836607:1:exon
so has part: feature:837365-837485:1:exon
so has part: feature:840195-840351:1:exon
so has part: feature:841134-841303:1:exon
so has part: feature:842264-842372:1:exon
so has part: feature:843217-843440:1:exon
so has part: feature:844515-844634:1:exon
so has part: feature:845913-845998:1:exon
so has part: feature:846696-846753:1:exon
so has part: feature:847838-847945:1:exon
so has part: feature:848711-848899:1:exon
so has part: feature:849273-849371:1:exon
so has part: feature:851071-851154:1:exon
so has part: feature:851352-851540:1:exon
so has part: feature:852185-852380:1:exon
so has part: feature:852764-852867:1:exon

XP_032869330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:832102-832235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:833602-833647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835151-835275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836509-836607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837365-837485:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:840195-840351:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:841134-841303:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:842264-842372:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:843217-843440:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:844515-844634:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:845913-845998:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:846696-846753:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847838-847945:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:848711-848899:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:849273-849371:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851071-851154:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:851352-851540:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:852185-852380:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:852764-852867:1:exon

med25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: med25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 25 isoform X2
translation: MVVPLNDTPSPSSMVSDVVFVIEGTANLGPYFESLRNHYILPAIEYFNDGPPAETDFGGDYGGTQYSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDSIQFMGGGGESCSLIAEGLSTALQLFDDFKKMREQIGQTRKICVLICNSPPYLLSAVESTTYSGLTTDRLVQMIGDRGIHFSVVSPRKLPALRVLFEKAALGGVIETQLKDYSQDPRHMIMIRGIVLPGGGTVAANTVPQKPIPPQPPMQPQPSLLSSQSQASQQSQSQPPSQPQAMPSISQPYQGPVATGSLAGAQAAAQIALETATNQAKAAVVPATNRFPAVNQIAPASGAGAMISQASSQTLAPSPVASLAKVIPSNTSLMTAAAAVAQSGLVSTVTTGIPQTTPQAPPQSLTVGVGTSSGNVCGVTVAPTPPPGSVANKILAWNGVLEWQEKPKPSPADMNAKLTRSLPCQVYVNPGENLKTDQWPQKLIMQLIPQQLLTTLGHLFRNSRMVQFQFTNKDLESLKGLYRIMANGFAGCVHFPHSAPCEVRVLMLLYSSKKKIFMGLIPNDQSGFVNGIRLVITNHKKAQQQKIEQQRSQLGGSQPMAAGPIPNVGFMQKPPGAMPVQQQQMPGQSVATSIPQVHTVTTLDDQQRQQNLQQQMQLRVQQQQQQQQQQAATQQQSSGPPPNQPAATQQAGTLLRPPNPGANPQLRSLLLSQQTSQSGGPQPGQPMHHIQQQASQMMPHQSMGQPMPHHPQGQQLQMPGQQLMHQGGQPWGNQMAQRPPLQGQMMMSAGPRGPVPPAGMQQGTSLLEEEILMDLI
SIO_010081: med25
subclass of: SO_0000673
so part of: med25
location: join(832102..832235,833602..833647,835151..835275,836509..836607,837365..837485,840195..840351,841134..841303,842264..842372,843217..843440,844515..844634,845913..845998,846696..846753,847838..847945,848711..848899,849273..849365,851068..851154,851352..851540,852179..852380,852764..852867)
location: region:832102-852867:1
so has part: feature:832102-832235:1:exon
so has part: feature:833602-833647:1:exon
so has part: feature:835151-835275:1:exon
so has part: feature:836509-836607:1:exon
so has part: feature:837365-837485:1:exon
so has part: feature:840195-840351:1:exon
so has part: feature:841134-841303:1:exon
so has part: feature:842264-842372:1:exon
so has part: feature:843217-843440:1:exon
so has part: feature:844515-844634:1:exon
so has part: feature:845913-845998:1:exon
so has part: feature:846696-846753:1:exon
so has part: feature:847838-847945:1:exon
so has part: feature:848711-848899:1:exon
so has part: feature:849273-849365:1:exon
so has part: feature:851068-851154:1:exon
so has part: feature:851352-851540:1:exon
so has part: feature:852179-852380:1:exon
so has part: feature:852764-852867:1:exon

XP_032869327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:832102-832235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:833602-833647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835151-835275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836509-836607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837365-837485:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:840195-840351:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:841134-841303:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:842264-842372:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:843217-843440:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:844515-844634:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:845913-845998:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:846696-846753:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847838-847945:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:848711-848899:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:849273-849365:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851068-851154:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:851352-851540:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:852179-852380:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:852764-852867:1:exon

med25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: med25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 25 isoform X3
translation: MVVPLNDTPSPSSMVSDVVFVIEGTANLGPYFESLRNHYILPAIEYFNDGPPAETDFGGDYGGTQYSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDSIQFMGGGGESCSLIAEGLSTALQLFDDFKKMREQIGQTRKICVLICNSPPYLLSAVESTTYSGLTTDRLVQMIGDRGIHFSVVSPRKLPALRVLFEKAALGGVIETQLKDYSQDPRHMIMIRGIVLPGGGTVAANTVPQKPIPPQPPMQPQPSLLSSQSQASQQSQSQPPSQPQAMPSISQPYQGPVATGSLAGAQAAAQIALETATNQAKAAVVPATNRFPAVNQIAPASGAGAMISQASSQTLAPSPVASLAKVIPSNTSLMTAAAAVAQSGLVSTVTTGIPQTTPQAPPQSLTVGVGTSSGNVCGVTVAPTPPPGSVANKILAWNGVLEWQEKPKPSPADMNAKLTRSLPCQVYVNPGENLKTDQWPQKLIMQLIPQQLLTTLGHLFRNSRMVQFQFTNKDLESLKGLYRIMANGFAGCVHFPHSAPCEVRVLMLLYSSKKKIFMGLIPNDQSGFVNGIRLVITNHKKAQQQKIEQQRSLGGSQPMAAGPIPNVGFMQKPPGAMPVQQQQQMPGQSVATSIPQVHTVTTLDDQQRQQNLQQQMQLRVQQQQQQQQQQAATQQQSSGPPPNQPAATQQAGTLLRPPNPGANPQLRSLLLSQQTSQSGGPQPGQPMHHIQQQASQMMPHQSMGQPMPHHPQGQQLQMPGQQLMHQGGQPWGNQMAQRPPLQGQMMMSAGPRGPVPPAGMQQGTSLLEEEILMDLI
SIO_010081: med25
subclass of: SO_0000673
so part of: med25
location: join(832102..832235,833602..833647,835151..835275,836509..836607,837365..837485,840195..840351,841134..841303,842264..842372,843217..843440,844515..844634,845913..845998,846696..846753,847838..847945,848711..848899,849276..849371,851071..851154,851352..851540,852179..852380,852764..852867)
location: region:832102-852867:1
so has part: feature:832102-832235:1:exon
so has part: feature:833602-833647:1:exon
so has part: feature:835151-835275:1:exon
so has part: feature:836509-836607:1:exon
so has part: feature:837365-837485:1:exon
so has part: feature:840195-840351:1:exon
so has part: feature:841134-841303:1:exon
so has part: feature:842264-842372:1:exon
so has part: feature:843217-843440:1:exon
so has part: feature:844515-844634:1:exon
so has part: feature:845913-845998:1:exon
so has part: feature:846696-846753:1:exon
so has part: feature:847838-847945:1:exon
so has part: feature:848711-848899:1:exon
so has part: feature:849276-849371:1:exon
so has part: feature:851071-851154:1:exon
so has part: feature:851352-851540:1:exon
so has part: feature:852179-852380:1:exon
so has part: feature:852764-852867:1:exon

XP_032869328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:832102-832235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:833602-833647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835151-835275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836509-836607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837365-837485:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:840195-840351:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:841134-841303:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:842264-842372:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:843217-843440:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:844515-844634:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:845913-845998:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:846696-846753:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847838-847945:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:848711-848899:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:849276-849371:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851071-851154:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:851352-851540:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:852179-852380:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:852764-852867:1:exon

med25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: med25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 25 isoform X4
translation: MVVPLNDTPSPSSMVSDVVFVIEGTANLGPYFESLRNHYILPAIEYFNDGPPAETDFGGDYGGTQYSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDSIQFMGGGGESCSLIAEGLSTALQLFDDFKKMREQIGQTRKICVLICNSPPYLLSAVESTTYSGLTTDRLVQMIGDRGIHFSVVSPRKLPALRVLFEKAALGGVIETQLKDYSQDPRHMIMIRGIVLPGGGTVAANTVPQKPIPPQPPMQPQPSLLSSQSQASQQSQSQPPSQPQAMPSISQPYQGPVATGSLAGAQAAAQIALETATNQAKAAVVPATNRFPAVNQIAPASGAGAMISQASSQTLAPSPVASLAKVIPSNTSLMTAAAAVAQSGLVSTVTTGIPQTTPQAPPQSLTVGVGTSSGNVCGVTVAPTPPPGSVANKILAWNGVLEWQEKPKPSPADMNAKLTRSLPCQVYVNPGENLKTDQWPQKLIMQLIPQQLLTTLGHLFRNSRMVQFQFTNKDLESLKGLYRIMANGFAGCVHFPHSAPCEVRVLMLLYSSKKKIFMGLIPNDQSGFVNGIRLVITNHKKAQQQKIEQQRSLGGSQPMAAGPIPNVGFMQKPPGAMPVQQQQMPGQSVATSIPQVHTVTTLDDQQRQQNLQQQMQLRVQQQQQQQQQQAATQQQSSGPPPNQPAATQQAGTLLRPPNPGANPQLRSLLLSQQTSQSGGPQPGQPMHHIQQQASQMMPHQSMGQPMPHHPQGQQLQMPGQQLMHQGGQPWGNQMAQRPPLQGQMMMSAGPRGPVPPAGMQQGTSLLEEEILMDLI
SIO_010081: med25
subclass of: SO_0000673
so part of: med25
location: join(832102..832235,833602..833647,835151..835275,836509..836607,837365..837485,840195..840351,841134..841303,842264..842372,843217..843440,844515..844634,845913..845998,846696..846753,847838..847945,848711..848899,849276..849365,851068..851154,851352..851540,852179..852380,852764..852867)
location: region:832102-852867:1
so has part: feature:832102-832235:1:exon
so has part: feature:833602-833647:1:exon
so has part: feature:835151-835275:1:exon
so has part: feature:836509-836607:1:exon
so has part: feature:837365-837485:1:exon
so has part: feature:840195-840351:1:exon
so has part: feature:841134-841303:1:exon
so has part: feature:842264-842372:1:exon
so has part: feature:843217-843440:1:exon
so has part: feature:844515-844634:1:exon
so has part: feature:845913-845998:1:exon
so has part: feature:846696-846753:1:exon
so has part: feature:847838-847945:1:exon
so has part: feature:848711-848899:1:exon
so has part: feature:849276-849365:1:exon
so has part: feature:851068-851154:1:exon
so has part: feature:851352-851540:1:exon
so has part: feature:852179-852380:1:exon
so has part: feature:852764-852867:1:exon

XP_032869329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:832102-832235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:833602-833647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835151-835275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836509-836607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837365-837485:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:840195-840351:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:841134-841303:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:842264-842372:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:843217-843440:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:844515-844634:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:845913-845998:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:846696-846753:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847838-847945:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:848711-848899:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:849276-849365:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851068-851154:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:851352-851540:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:852179-852380:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:852764-852867:1:exon

LOC116967014
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116967014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(859305..892042)
location: region:859305-892042:-1
so has part: feature:859305-892042:-1:exon
subclass of: SO_0000010

116967014
type: Gene
SIO_000068: ncbigene

position:859305:-1
position: 859305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892042:-1
position: 892042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:859305-892042:-1:exon

LOC116967014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116967014
product: protein kinase C and casein kinase substrate in neurons protein 3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033013443.1
SIO_010081: LOC116967014
subclass of: SO_0000673
so part of: LOC116967014
location: complement(join(859305..860222,865668..865753,866459..866579,869449..869624,869931..870083,871326..871561,872515..872671,873857..873992,891692..892042))
location: region:859305-892042:-1
so has part: feature:891692-892042:-1:exon
so has part: feature:873857-873992:-1:exon
so has part: feature:872515-872671:-1:exon
so has part: feature:871326-871561:-1:exon
so has part: feature:869931-870083:-1:exon
so has part: feature:869449-869624:-1:exon
so has part: feature:866459-866579:-1:exon
so has part: feature:865668-865753:-1:exon
so has part: feature:859305-860222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:891692-892042:-1:exon

position:891692:-1
position: 891692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:873857-873992:-1:exon

position:873857:-1
position: 873857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873992:-1
position: 873992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:872515-872671:-1:exon

position:872515:-1
position: 872515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872671:-1
position: 872671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:871326-871561:-1:exon

position:871326:-1
position: 871326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871561:-1
position: 871561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:869931-870083:-1:exon

position:869931:-1
position: 869931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870083:-1
position: 870083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:869449-869624:-1:exon

position:869449:-1
position: 869449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869624:-1
position: 869624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:866459-866579:-1:exon

position:866459:-1
position: 866459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866579:-1
position: 866579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:865668-865753:-1:exon

position:865668:-1
position: 865668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865753:-1
position: 865753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:859305-860222:-1:exon

position:860222:-1
position: 860222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116967014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116967014
product: protein kinase C and casein kinase substrate in neurons protein 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033013441.1
SIO_010081: LOC116967014
subclass of: SO_0000673
so part of: LOC116967014
location: complement(join(859944..860222,863121..863233,865668..865753,866459..866579,869449..869624,869931..870083,871326..871561,872515..872671,873857..873992,891692..892041))
location: region:859944-892041:-1
so has part: feature:891692-892041:-1:exon
so has part: feature:873857-873992:-1:exon
so has part: feature:872515-872671:-1:exon
so has part: feature:871326-871561:-1:exon
so has part: feature:869931-870083:-1:exon
so has part: feature:869449-869624:-1:exon
so has part: feature:866459-866579:-1:exon
so has part: feature:865668-865753:-1:exon
so has part: feature:863121-863233:-1:exon
so has part: feature:859944-860222:-1:exon

position:859944:-1
position: 859944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892041:-1
position: 892041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891692-892041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:873857-873992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:872515-872671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:871326-871561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:869931-870083:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:869449-869624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:866459-866579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:865668-865753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:863121-863233:-1:exon

position:863121:-1
position: 863121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863233:-1
position: 863233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:859944-860222:-1:exon

LOC116967014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116967014
product: protein kinase C and casein kinase substrate in neurons protein 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033013442.1
SIO_010081: LOC116967014
subclass of: SO_0000673
so part of: LOC116967014
location: complement(join(860081..860222,863125..863233,865668..865753,866459..866579,869449..869624,869931..870083,871326..871561,872515..872671,873857..873992,891692..892042))
location: region:860081-892042:-1
so has part: feature:891692-892042:-1:exon
so has part: feature:873857-873992:-1:exon
so has part: feature:872515-872671:-1:exon
so has part: feature:871326-871561:-1:exon
so has part: feature:869931-870083:-1:exon
so has part: feature:869449-869624:-1:exon
so has part: feature:866459-866579:-1:exon
so has part: feature:865668-865753:-1:exon
so has part: feature:863125-863233:-1:exon
so has part: feature:860081-860222:-1:exon

position:860081:-1
position: 860081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891692-892042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:873857-873992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:872515-872671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:871326-871561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:869931-870083:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:869449-869624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:866459-866579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:865668-865753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:863125-863233:-1:exon

position:863125:-1
position: 863125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:860081-860222:-1:exon

LOC116967014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116967014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kinase C and casein kinase substrate in neurons protein 3-like isoform X1
translation: MPDGQSAGEQGKAIERAAMSLKYCNVPSPEATSNSFWMPDKYKSTAKRVDDGYKICNDIMLCFQERAKIEKQYSLQMAAWSRKWKPLVEASPMYGTLLKAWHAFLTSADRLSELHSDIHTSLVAEDTGRIRKWQKEMYHKKFFGGFKETHEVAHGFKKAQKPWTKKLQKAGKLRKLYHAKRKKERVAILRENGCRANAASSWKQQKQLRQREQRSQEAEKVKQRYTKTIEDLNKYNPKYMEEMEMVFDQSQQLEQKRTVFLKQIFLSIHRHLDVTNNESFRSIFKDLHQTVLSINDQNDLKWWRNTYGPGMPTNWPHFEEWSPGPEKITDKKGKGQKEAEKVVLQSLSLNKGYSLGEDGRNIPGVRIRALYDYSSQESDELSFKAGQELTKIEDEDEQGWCKGYLDGGRIGLYPANYVELVQ
SIO_010081: LOC116967014
subclass of: SO_0000673
so part of: LOC116967014
location: complement(join(860110..860222,863121..863233,865668..865753,866459..866579,869449..869624,869931..870083,871326..871561,872515..872671,873857..873970))
location: region:860110-873970:-1
so has part: feature:873857-873970:-1:exon
so has part: feature:872515-872671:-1:exon
so has part: feature:871326-871561:-1:exon
so has part: feature:869931-870083:-1:exon
so has part: feature:869449-869624:-1:exon
so has part: feature:866459-866579:-1:exon
so has part: feature:865668-865753:-1:exon
so has part: feature:863121-863233:-1:exon
so has part: feature:860110-860222:-1:exon

XP_032869332.1
type: Protein
SIO_000068: ncbiprotein

position:860110:-1
position: 860110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873970:-1
position: 873970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:873857-873970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872515-872671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:871326-871561:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:869931-870083:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:869449-869624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866459-866579:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865668-865753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:863121-863233:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:860110-860222:-1:exon

LOC116967014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116967014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kinase C and casein kinase substrate in neurons protein 1-like isoform X3
translation: MPDGQSAGEQGKAIERAAMSLKYCNVPSPEATSNSFWMPDKYKSTAKRVDDGYKICNDIMLCFQERAKIEKQYSLQMAAWSRKWKPLVEASPMYGTLLKAWHAFLTSADRLSELHSDIHTSLVAEDTGRIRKWQKEMYHKKFFGGFKETHEVAHGFKKAQKPWTKKLQKAGKLRKLYHAKRKKERVAILRENGCRANAASSWKQQKQLRQREQRSQEAEKVKQRYTKTIEDLNKYNPKYMEEMEMVFDQSQQLEQKRTVFLKQIFLSIHRHLDVTNNESFRSIFKDLHQTVLSINDQNDLKWWRNTYGPGMPTNWPHFEEWSPGPEKITDKKGKGQKEAEKVVLQSLRSGTD
SIO_010081: LOC116967014
subclass of: SO_0000673
so part of: LOC116967014
location: complement(join(860207..860222,865668..865753,866459..866579,869449..869624,869931..870083,871326..871561,872515..872671,873857..873970))
location: region:860207-873970:-1
so has part: feature:873857-873970:-1:exon
so has part: feature:872515-872671:-1:exon
so has part: feature:871326-871561:-1:exon
so has part: feature:869931-870083:-1:exon
so has part: feature:869449-869624:-1:exon
so has part: feature:866459-866579:-1:exon
so has part: feature:865668-865753:-1:exon
so has part: feature:860207-860222:-1:exon

XP_032869334.1
type: Protein
SIO_000068: ncbiprotein

position:860207:-1
position: 860207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:873857-873970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872515-872671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:871326-871561:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:869931-870083:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:869449-869624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866459-866579:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865668-865753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:860207-860222:-1:exon

LOC116967014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116967014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kinase C and casein kinase substrate in neurons protein 3-like isoform X2
translation: MPDGQSAGEQGKAIERAAMSLKYCNVPSPEATSNSFWMPDKYKSTAKRVDDGYKICNDIMLCFQERAKIEKQYSLQMAAWSRKWKPLVEASPMYGTLLKAWHAFLTSADRLSELHSDIHTSLVAEDTGRIRKWQKEMYHKKFFGGFKETHEVAHGFKKAQKPWTKKLQKAGKLRKLYHAKRKKERVAILRENGCRANAASSWKQQKQLRQREQRSQEAEKVKQRYTKTIEDLNKYNPKYMEEMEMVFDQSQQLEQKRTVFLKQIFLSIHRHLDVTNNESFRSIFKDLHQTVLSINDQNDLKWWRNTYGPGMPTNWPHFEEWSPGPEKITDKKGKGQKEAEKVVLQSLSLNKGYSLGEDGRNIPGVRIRALYDYSSQESDELSFKVRN
SIO_010081: LOC116967014
subclass of: SO_0000673
so part of: LOC116967014
location: complement(join(860211..860222,863125..863233,865668..865753,866459..866579,869449..869624,869931..870083,871326..871561,872515..872671,873857..873970))
location: region:860211-873970:-1
so has part: feature:873857-873970:-1:exon
so has part: feature:872515-872671:-1:exon
so has part: feature:871326-871561:-1:exon
so has part: feature:869931-870083:-1:exon
so has part: feature:869449-869624:-1:exon
so has part: feature:866459-866579:-1:exon
so has part: feature:865668-865753:-1:exon
so has part: feature:863125-863233:-1:exon
so has part: feature:860211-860222:-1:exon

XP_032869333.1
type: Protein
SIO_000068: ncbiprotein

position:860211:-1
position: 860211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:873857-873970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872515-872671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:871326-871561:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:869931-870083:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:869449-869624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866459-866579:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865668-865753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:863125-863233:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:860211-860222:-1:exon

LOC116966869
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(897147..902103)
location: region:897147-902103:-1
so has part: feature:897147-902103:-1:exon
subclass of: SO_0000010

116966869
type: Gene
SIO_000068: ncbigene

position:897147:-1
position: 897147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902103:-1
position: 902103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:897147-902103:-1:exon

LOC116966869
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966869
product: uncharacterized LOC116966869, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033013219.1
SIO_010081: LOC116966869
subclass of: SO_0000673
so part of: LOC116966869
location: complement(join(897147..897828,898788..898973,899917..900177,900285..900466,900573..901199,901237..901273,901422..902103))
location: region:897147-902103:-1
so has part: feature:901422-902103:-1:exon
so has part: feature:901237-901273:-1:exon
so has part: feature:900573-901199:-1:exon
so has part: feature:900285-900466:-1:exon
so has part: feature:899917-900177:-1:exon
so has part: feature:898788-898973:-1:exon
so has part: feature:897147-897828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901422-902103:-1:exon

position:901422:-1
position: 901422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:901237-901273:-1:exon

position:901237:-1
position: 901237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901273:-1
position: 901273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:900573-901199:-1:exon

position:900573:-1
position: 900573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901199:-1
position: 901199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:900285-900466:-1:exon

position:900285:-1
position: 900285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900466:-1
position: 900466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:899917-900177:-1:exon

position:899917:-1
position: 899917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900177:-1
position: 900177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:898788-898973:-1:exon

position:898788:-1
position: 898788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898973:-1
position: 898973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:897147-897828:-1:exon

position:897828:-1
position: 897828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116966869
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966869
product: uncharacterized LOC116966869, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033013218.1
SIO_010081: LOC116966869
subclass of: SO_0000673
so part of: LOC116966869
location: complement(join(897147..897828,898788..898973,899917..900177,900285..900466,900573..901347,901422..902103))
location: region:897147-902103:-1
so has part: feature:901422-902103:-1:exon
so has part: feature:900573-901347:-1:exon
so has part: feature:900285-900466:-1:exon
so has part: feature:899917-900177:-1:exon
so has part: feature:898788-898973:-1:exon
so has part: feature:897147-897828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901422-902103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:900573-901347:-1:exon

position:901347:-1
position: 901347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:900285-900466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:899917-900177:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:898788-898973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:897147-897828:-1:exon

LOC116966869
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966869
product: uncharacterized LOC116966869, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033013217.1
SIO_010081: LOC116966869
subclass of: SO_0000673
so part of: LOC116966869
location: complement(join(897147..897828,898788..898973,899917..900177,900285..900466,900573..901384,901422..902103))
location: region:897147-902103:-1
so has part: feature:901422-902103:-1:exon
so has part: feature:900573-901384:-1:exon
so has part: feature:900285-900466:-1:exon
so has part: feature:899917-900177:-1:exon
so has part: feature:898788-898973:-1:exon
so has part: feature:897147-897828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901422-902103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:900573-901384:-1:exon

position:901384:-1
position: 901384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:900285-900466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:899917-900177:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:898788-898973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:897147-897828:-1:exon

LOC116966869
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966869
product: uncharacterized LOC116966869, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033013216.1
SIO_010081: LOC116966869
subclass of: SO_0000673
so part of: LOC116966869
location: complement(join(897147..897828,898788..898973,899917..900177,900285..900466,900573..901199,901237..901273,901311..902103))
location: region:897147-902103:-1
so has part: feature:901311-902103:-1:exon
so has part: feature:901237-901273:-1:exon
so has part: feature:900573-901199:-1:exon
so has part: feature:900285-900466:-1:exon
so has part: feature:899917-900177:-1:exon
so has part: feature:898788-898973:-1:exon
so has part: feature:897147-897828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901311-902103:-1:exon

position:901311:-1
position: 901311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:901237-901273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900573-901199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:900285-900466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899917-900177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:898788-898973:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:897147-897828:-1:exon

LOC116966869
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966869
product: uncharacterized LOC116966869, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033013215.1
SIO_010081: LOC116966869
subclass of: SO_0000673
so part of: LOC116966869
location: complement(join(897147..897828,898788..898973,899917..900177,900285..900466,900573..901273,901311..902103))
location: region:897147-902103:-1
so has part: feature:901311-902103:-1:exon
so has part: feature:900573-901273:-1:exon
so has part: feature:900285-900466:-1:exon
so has part: feature:899917-900177:-1:exon
so has part: feature:898788-898973:-1:exon
so has part: feature:897147-897828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901311-902103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:900573-901273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900285-900466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:899917-900177:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:898788-898973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:897147-897828:-1:exon

LOC116966869
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966869
product: uncharacterized LOC116966869, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033013214.1
SIO_010081: LOC116966869
subclass of: SO_0000673
so part of: LOC116966869
location: complement(join(897147..897828,898788..898973,899917..900177,900285..900466,900573..901199,901237..902103))
location: region:897147-902103:-1
so has part: feature:901237-902103:-1:exon
so has part: feature:900573-901199:-1:exon
so has part: feature:900285-900466:-1:exon
so has part: feature:899917-900177:-1:exon
so has part: feature:898788-898973:-1:exon
so has part: feature:897147-897828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901237-902103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:900573-901199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900285-900466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:899917-900177:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:898788-898973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:897147-897828:-1:exon

LOC116966869
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966869
product: uncharacterized LOC116966869, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033013220.1
SIO_010081: LOC116966869
subclass of: SO_0000673
so part of: LOC116966869
location: complement(join(897147..897828,898788..898973,899917..900114,900285..900466,900573..902103))
location: region:897147-902103:-1
so has part: feature:900573-902103:-1:exon
so has part: feature:900285-900466:-1:exon
so has part: feature:899917-900114:-1:exon
so has part: feature:898788-898973:-1:exon
so has part: feature:897147-897828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:900573-902103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:900285-900466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899917-900114:-1:exon

position:900114:-1
position: 900114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:898788-898973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:897147-897828:-1:exon

LOC116966869
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116966869 isoform X2
translation: MVPRRRQEQPPLTWQVKTEEIQEIVVQEVEVKVEEDLEETMEVAIEVGHVHITTPPWTGRPLKATGAVSGPDSHYAQVTATSRRVKKPWKIAPPYNFSREQEEELVDWYQANTDLYDKNSNYYRSKTKKSALLHSKAKEFPGCTYAQLCRWIKGQRTRYGKLSRSASRSGSGGKKVTDREQWILDKWAFMETHIIRLERRRSTKRFEKKTLPSVSSEDGLDALEVISEPTPSTSQQHSARRWITASPTVGSTTTTAEEEERQATQRELIKELVQQATGAREARHSMIQPQTSHERAVDTFLAFLKTELLKIPENVWNNYTIDALSRAQSFSRPCQPSLMKEET
SIO_010081: LOC116966869
subclass of: SO_0000673
so part of: LOC116966869
location: complement(join(897796..897828,898788..898973,899917..900114,900285..900466,900573..901005))
location: region:897796-901005:-1
so has part: feature:900573-901005:-1:exon
so has part: feature:900285-900466:-1:exon
so has part: feature:899917-900114:-1:exon
so has part: feature:898788-898973:-1:exon
so has part: feature:897796-897828:-1:exon

XP_032869111.1
type: Protein
SIO_000068: ncbiprotein

position:897796:-1
position: 897796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901005:-1
position: 901005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:900573-901005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:900285-900466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899917-900114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898788-898973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:897796-897828:-1:exon

LOC116966869
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116966869 isoform X1
translation: MVPRRRQEQPPLTWQVKTEEIQEIVVQEVEVKVEEDLEETMEVAIEVGHVHITTPPWTGRPLKATGAVSGPDSHYAQVTATSRRVKKPWKIAPPYNFSREQEEELVDWYQANTDLYDKNSNYYRSKTKKSALLHSKAKEFPGCTYAQLCRWIKGQRTRYGKLSRSASRSGSGGKKVTDREQWILDKWAFMETHIIRLERRRSTKRFEKKTLPRISSEDALDALEFEFEKKTLPSVSSEDGLDALEVISEPTPSTSQQHSARRWITASPTVGSTTTTAEEEERQATQRELIKELVQQATGAREARHSMIQPQTSHERAVDTFLAFLKTELLKIPENVWNNYTIDALSRAQSFSRPCQPSLMKEET
SIO_010081: LOC116966869
subclass of: SO_0000673
so part of: LOC116966869
location: complement(join(897796..897828,898788..898973,899917..900177,900285..900466,900573..901005))
location: region:897796-901005:-1
so has part: feature:900573-901005:-1:exon
so has part: feature:900285-900466:-1:exon
so has part: feature:899917-900177:-1:exon
so has part: feature:898788-898973:-1:exon
so has part: feature:897796-897828:-1:exon

XP_032869105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:900573-901005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:900285-900466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899917-900177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898788-898973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:897796-897828:-1:exon

LOC116966869
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116966869 isoform X1
translation: MVPRRRQEQPPLTWQVKTEEIQEIVVQEVEVKVEEDLEETMEVAIEVGHVHITTPPWTGRPLKATGAVSGPDSHYAQVTATSRRVKKPWKIAPPYNFSREQEEELVDWYQANTDLYDKNSNYYRSKTKKSALLHSKAKEFPGCTYAQLCRWIKGQRTRYGKLSRSASRSGSGGKKVTDREQWILDKWAFMETHIIRLERRRSTKRFEKKTLPRISSEDALDALEFEFEKKTLPSVSSEDGLDALEVISEPTPSTSQQHSARRWITASPTVGSTTTTAEEEERQATQRELIKELVQQATGAREARHSMIQPQTSHERAVDTFLAFLKTELLKIPENVWNNYTIDALSRAQSFSRPCQPSLMKEET
SIO_010081: LOC116966869
subclass of: SO_0000673
so part of: LOC116966869
location: complement(join(897796..897828,898788..898973,899917..900177,900285..900466,900573..901005))
location: region:897796-901005:-1
so has part: feature:900573-901005:-1:exon
so has part: feature:900285-900466:-1:exon
so has part: feature:899917-900177:-1:exon
so has part: feature:898788-898973:-1:exon
so has part: feature:897796-897828:-1:exon

XP_032869106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:900573-901005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:900285-900466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899917-900177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898788-898973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:897796-897828:-1:exon

LOC116966869
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116966869 isoform X1
translation: MVPRRRQEQPPLTWQVKTEEIQEIVVQEVEVKVEEDLEETMEVAIEVGHVHITTPPWTGRPLKATGAVSGPDSHYAQVTATSRRVKKPWKIAPPYNFSREQEEELVDWYQANTDLYDKNSNYYRSKTKKSALLHSKAKEFPGCTYAQLCRWIKGQRTRYGKLSRSASRSGSGGKKVTDREQWILDKWAFMETHIIRLERRRSTKRFEKKTLPRISSEDALDALEFEFEKKTLPSVSSEDGLDALEVISEPTPSTSQQHSARRWITASPTVGSTTTTAEEEERQATQRELIKELVQQATGAREARHSMIQPQTSHERAVDTFLAFLKTELLKIPENVWNNYTIDALSRAQSFSRPCQPSLMKEET
SIO_010081: LOC116966869
subclass of: SO_0000673
so part of: LOC116966869
location: complement(join(897796..897828,898788..898973,899917..900177,900285..900466,900573..901005))
location: region:897796-901005:-1
so has part: feature:900573-901005:-1:exon
so has part: feature:900285-900466:-1:exon
so has part: feature:899917-900177:-1:exon
so has part: feature:898788-898973:-1:exon
so has part: feature:897796-897828:-1:exon

XP_032869107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:900573-901005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:900285-900466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899917-900177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898788-898973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:897796-897828:-1:exon

LOC116966869
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116966869 isoform X1
translation: MVPRRRQEQPPLTWQVKTEEIQEIVVQEVEVKVEEDLEETMEVAIEVGHVHITTPPWTGRPLKATGAVSGPDSHYAQVTATSRRVKKPWKIAPPYNFSREQEEELVDWYQANTDLYDKNSNYYRSKTKKSALLHSKAKEFPGCTYAQLCRWIKGQRTRYGKLSRSASRSGSGGKKVTDREQWILDKWAFMETHIIRLERRRSTKRFEKKTLPRISSEDALDALEFEFEKKTLPSVSSEDGLDALEVISEPTPSTSQQHSARRWITASPTVGSTTTTAEEEERQATQRELIKELVQQATGAREARHSMIQPQTSHERAVDTFLAFLKTELLKIPENVWNNYTIDALSRAQSFSRPCQPSLMKEET
SIO_010081: LOC116966869
subclass of: SO_0000673
so part of: LOC116966869
location: complement(join(897796..897828,898788..898973,899917..900177,900285..900466,900573..901005))
location: region:897796-901005:-1
so has part: feature:900573-901005:-1:exon
so has part: feature:900285-900466:-1:exon
so has part: feature:899917-900177:-1:exon
so has part: feature:898788-898973:-1:exon
so has part: feature:897796-897828:-1:exon

XP_032869108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:900573-901005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:900285-900466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899917-900177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898788-898973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:897796-897828:-1:exon

LOC116966869
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116966869 isoform X1
translation: MVPRRRQEQPPLTWQVKTEEIQEIVVQEVEVKVEEDLEETMEVAIEVGHVHITTPPWTGRPLKATGAVSGPDSHYAQVTATSRRVKKPWKIAPPYNFSREQEEELVDWYQANTDLYDKNSNYYRSKTKKSALLHSKAKEFPGCTYAQLCRWIKGQRTRYGKLSRSASRSGSGGKKVTDREQWILDKWAFMETHIIRLERRRSTKRFEKKTLPRISSEDALDALEFEFEKKTLPSVSSEDGLDALEVISEPTPSTSQQHSARRWITASPTVGSTTTTAEEEERQATQRELIKELVQQATGAREARHSMIQPQTSHERAVDTFLAFLKTELLKIPENVWNNYTIDALSRAQSFSRPCQPSLMKEET
SIO_010081: LOC116966869
subclass of: SO_0000673
so part of: LOC116966869
location: complement(join(897796..897828,898788..898973,899917..900177,900285..900466,900573..901005))
location: region:897796-901005:-1
so has part: feature:900573-901005:-1:exon
so has part: feature:900285-900466:-1:exon
so has part: feature:899917-900177:-1:exon
so has part: feature:898788-898973:-1:exon
so has part: feature:897796-897828:-1:exon

XP_032869109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:900573-901005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:900285-900466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899917-900177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898788-898973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:897796-897828:-1:exon

LOC116966869
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116966869 isoform X1
translation: MVPRRRQEQPPLTWQVKTEEIQEIVVQEVEVKVEEDLEETMEVAIEVGHVHITTPPWTGRPLKATGAVSGPDSHYAQVTATSRRVKKPWKIAPPYNFSREQEEELVDWYQANTDLYDKNSNYYRSKTKKSALLHSKAKEFPGCTYAQLCRWIKGQRTRYGKLSRSASRSGSGGKKVTDREQWILDKWAFMETHIIRLERRRSTKRFEKKTLPRISSEDALDALEFEFEKKTLPSVSSEDGLDALEVISEPTPSTSQQHSARRWITASPTVGSTTTTAEEEERQATQRELIKELVQQATGAREARHSMIQPQTSHERAVDTFLAFLKTELLKIPENVWNNYTIDALSRAQSFSRPCQPSLMKEET
SIO_010081: LOC116966869
subclass of: SO_0000673
so part of: LOC116966869
location: complement(join(897796..897828,898788..898973,899917..900177,900285..900466,900573..901005))
location: region:897796-901005:-1
so has part: feature:900573-901005:-1:exon
so has part: feature:900285-900466:-1:exon
so has part: feature:899917-900177:-1:exon
so has part: feature:898788-898973:-1:exon
so has part: feature:897796-897828:-1:exon

XP_032869110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:900573-901005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:900285-900466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899917-900177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898788-898973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:897796-897828:-1:exon

LOC116966911
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966911
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 903270..905492
location: region:903270-905492:1
so has part: feature:903270-905492:1:exon
subclass of: SO_0000011

116966911
type: Gene
SIO_000068: ncbigene

position:903270:1
position: 903270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905492:1
position: 905492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903270-905492:1:exon

LOC116966911
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116966911
product: uncharacterized LOC116966911
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XR_004410091.1
SIO_010081: LOC116966911
subclass of: SO_0000673
so part of: LOC116966911
location: join(903270..903397,904337..904382,904953..905492)
location: region:903270-905492:1
so has part: feature:903270-903397:1:exon
so has part: feature:904337-904382:1:exon
so has part: feature:904953-905492:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:903270-903397:1:exon

position:903397:1
position: 903397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:904337-904382:1:exon

position:904337:1
position: 904337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904382:1
position: 904382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:904953-905492:1:exon

position:904953:1
position: 904953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116966751
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 910956..927181
location: region:910956-927181:1
so has part: feature:910956-927181:1:exon
subclass of: SO_0000010

116966751
type: Gene
SIO_000068: ncbigene

position:910956:1
position: 910956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927181:1
position: 927181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910956-927181:1:exon

LOC116966751
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966751
product: oxysterols receptor LXR-beta-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033013060.1
SIO_010081: LOC116966751
subclass of: SO_0000673
so part of: LOC116966751
location: join(910956..911226,914957..915133,915912..916001,916232..916393,918665..918826,919419..919688,920345..920553,921315..921494,924170..924269,925009..925122,925828..925922,926466..927181)
location: region:910956-927181:1
so has part: feature:910956-911226:1:exon
so has part: feature:914957-915133:1:exon
so has part: feature:915912-916001:1:exon
so has part: feature:916232-916393:1:exon
so has part: feature:918665-918826:1:exon
so has part: feature:919419-919688:1:exon
so has part: feature:920345-920553:1:exon
so has part: feature:921315-921494:1:exon
so has part: feature:924170-924269:1:exon
so has part: feature:925009-925122:1:exon
so has part: feature:925828-925922:1:exon
so has part: feature:926466-927181:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:910956-911226:1:exon

position:911226:1
position: 911226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:914957-915133:1:exon

position:914957:1
position: 914957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915133:1
position: 915133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:915912-916001:1:exon

position:915912:1
position: 915912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916001:1
position: 916001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:916232-916393:1:exon

position:916232:1
position: 916232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916393:1
position: 916393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:918665-918826:1:exon

position:918665:1
position: 918665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918826:1
position: 918826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:919419-919688:1:exon

position:919419:1
position: 919419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919688:1
position: 919688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:920345-920553:1:exon

position:920345:1
position: 920345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920553:1
position: 920553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:921315-921494:1:exon

position:921315:1
position: 921315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921494:1
position: 921494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:924170-924269:1:exon

position:924170:1
position: 924170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924269:1
position: 924269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:925009-925122:1:exon

position:925009:1
position: 925009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925122:1
position: 925122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:925828-925922:1:exon

position:925828:1
position: 925828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925922:1
position: 925922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:926466-927181:1:exon

position:926466:1
position: 926466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116966751
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966751
product: oxysterols receptor LXR-beta-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033013062.1
SIO_010081: LOC116966751
subclass of: SO_0000673
so part of: LOC116966751
location: join(910956..911226,914957..915133,915912..916001,916232..916393,918668..918826,919419..919688,920345..920553,921315..921494,924170..924269,925009..925122,925828..925922,926466..927181)
location: region:910956-927181:1
so has part: feature:910956-911226:1:exon
so has part: feature:914957-915133:1:exon
so has part: feature:915912-916001:1:exon
so has part: feature:916232-916393:1:exon
so has part: feature:918668-918826:1:exon
so has part: feature:919419-919688:1:exon
so has part: feature:920345-920553:1:exon
so has part: feature:921315-921494:1:exon
so has part: feature:924170-924269:1:exon
so has part: feature:925009-925122:1:exon
so has part: feature:925828-925922:1:exon
so has part: feature:926466-927181:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:910956-911226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:914957-915133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:915912-916001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916232-916393:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918668-918826:1:exon

position:918668:1
position: 918668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:919419-919688:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:920345-920553:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:921315-921494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924170-924269:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:925009-925122:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:925828-925922:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:926466-927181:1:exon

LOC116966751
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966751
product: oxysterols receptor LXR-beta-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033013063.1
SIO_010081: LOC116966751
subclass of: SO_0000673
so part of: LOC116966751
location: join(910956..911226,914957..915133,915912..916001,916232..916393,919419..919688,920345..920553,921315..921494,924170..924269,925009..925122,925828..925922,926466..927181)
location: region:910956-927181:1
so has part: feature:910956-911226:1:exon
so has part: feature:914957-915133:1:exon
so has part: feature:915912-916001:1:exon
so has part: feature:916232-916393:1:exon
so has part: feature:919419-919688:1:exon
so has part: feature:920345-920553:1:exon
so has part: feature:921315-921494:1:exon
so has part: feature:924170-924269:1:exon
so has part: feature:925009-925122:1:exon
so has part: feature:925828-925922:1:exon
so has part: feature:926466-927181:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:910956-911226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:914957-915133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:915912-916001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916232-916393:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:919419-919688:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:920345-920553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:921315-921494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:924170-924269:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:925009-925122:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:925828-925922:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:926466-927181:1:exon

LOC116966751
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966751
product: oxysterols receptor LXR-beta-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_033013061.1
SIO_010081: LOC116966751
subclass of: SO_0000673
so part of: LOC116966751
location: join(910956..911226,915912..916001,916232..916393,918665..918826,919419..919688,920345..920553,921315..921494,924170..924269,925009..925122,925828..925922,926466..927181)
location: region:910956-927181:1
so has part: feature:910956-911226:1:exon
so has part: feature:915912-916001:1:exon
so has part: feature:916232-916393:1:exon
so has part: feature:918665-918826:1:exon
so has part: feature:919419-919688:1:exon
so has part: feature:920345-920553:1:exon
so has part: feature:921315-921494:1:exon
so has part: feature:924170-924269:1:exon
so has part: feature:925009-925122:1:exon
so has part: feature:925828-925922:1:exon
so has part: feature:926466-927181:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:910956-911226:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:915912-916001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916232-916393:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918665-918826:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:919419-919688:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:920345-920553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:921315-921494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:924170-924269:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:925009-925122:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:925828-925922:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:926466-927181:1:exon

LOC116966751
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterols receptor LXR-beta-like isoform X1
translation: MSFPAVNGLDPGREDDKGAAEGVSGESRAVAPYRVKEEDDGEEVRDPASAVHTGSFPAESDGLLYISEDDKGAAEGVSGESKAVAPYRVKEEDDGEEVRDPASTVHTGSFPAESDGLLYISGDEPSVKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKSAQYTCKSSGKCEMDVYMRRKCQECRLRKCREAGMRDHCVLSEEQIRSKKQRKREEELVAPEVAAAEALPEATDKARLTAEQEEMIQQLVAAQQQCNKRSFSDQPKVTPWPQGNDPHNRETRQQRFAHFTELAIISVQEIVDFAKQIPGFLDLSREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKADFARAGLQFGFINPIFEFSKGMRKLQLDDAEYALLIAINIFSADRPNVEDHQLVERRQQPYVEALHSYLRIKRPKDHLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
SIO_010081: LOC116966751
subclass of: SO_0000673
so part of: LOC116966751
location: join(915962..916001,916232..916393,918665..918826,919419..919688,920345..920553,921315..921494,924170..924269,925009..925122,925828..925922,926466..926612)
location: region:915962-926612:1
so has part: feature:915962-916001:1:exon
so has part: feature:916232-916393:1:exon
so has part: feature:918665-918826:1:exon
so has part: feature:919419-919688:1:exon
so has part: feature:920345-920553:1:exon
so has part: feature:921315-921494:1:exon
so has part: feature:924170-924269:1:exon
so has part: feature:925009-925122:1:exon
so has part: feature:925828-925922:1:exon
so has part: feature:926466-926612:1:exon

XP_032868951.1
type: Protein
SIO_000068: ncbiprotein

position:915962:1
position: 915962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926612:1
position: 926612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:915962-916001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:916232-916393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918665-918826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:919419-919688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:920345-920553:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:921315-921494:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:924170-924269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:925009-925122:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:925828-925922:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:926466-926612:1:exon

LOC116966751
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterols receptor LXR-beta-like isoform X1
translation: MSFPAVNGLDPGREDDKGAAEGVSGESRAVAPYRVKEEDDGEEVRDPASAVHTGSFPAESDGLLYISEDDKGAAEGVSGESKAVAPYRVKEEDDGEEVRDPASTVHTGSFPAESDGLLYISGDEPSVKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKSAQYTCKSSGKCEMDVYMRRKCQECRLRKCREAGMRDHCVLSEEQIRSKKQRKREEELVAPEVAAAEALPEATDKARLTAEQEEMIQQLVAAQQQCNKRSFSDQPKVTPWPQGNDPHNRETRQQRFAHFTELAIISVQEIVDFAKQIPGFLDLSREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKADFARAGLQFGFINPIFEFSKGMRKLQLDDAEYALLIAINIFSADRPNVEDHQLVERRQQPYVEALHSYLRIKRPKDHLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
SIO_010081: LOC116966751
subclass of: SO_0000673
so part of: LOC116966751
location: join(915962..916001,916232..916393,918665..918826,919419..919688,920345..920553,921315..921494,924170..924269,925009..925122,925828..925922,926466..926612)
location: region:915962-926612:1
so has part: feature:915962-916001:1:exon
so has part: feature:916232-916393:1:exon
so has part: feature:918665-918826:1:exon
so has part: feature:919419-919688:1:exon
so has part: feature:920345-920553:1:exon
so has part: feature:921315-921494:1:exon
so has part: feature:924170-924269:1:exon
so has part: feature:925009-925122:1:exon
so has part: feature:925828-925922:1:exon
so has part: feature:926466-926612:1:exon

XP_032868952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:915962-916001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:916232-916393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918665-918826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:919419-919688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:920345-920553:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:921315-921494:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:924170-924269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:925009-925122:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:925828-925922:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:926466-926612:1:exon

LOC116966751
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterols receptor LXR-beta-like isoform X2
translation: MSFPAVNGLDPGREDDKGAAEGVSGESRAVAPYRVKEEDDGEEVRDPASAVHTGSFPAESDGLLYISDDKGAAEGVSGESKAVAPYRVKEEDDGEEVRDPASTVHTGSFPAESDGLLYISGDEPSVKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKSAQYTCKSSGKCEMDVYMRRKCQECRLRKCREAGMRDHCVLSEEQIRSKKQRKREEELVAPEVAAAEALPEATDKARLTAEQEEMIQQLVAAQQQCNKRSFSDQPKVTPWPQGNDPHNRETRQQRFAHFTELAIISVQEIVDFAKQIPGFLDLSREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKADFARAGLQFGFINPIFEFSKGMRKLQLDDAEYALLIAINIFSADRPNVEDHQLVERRQQPYVEALHSYLRIKRPKDHLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
SIO_010081: LOC116966751
subclass of: SO_0000673
so part of: LOC116966751
location: join(915962..916001,916232..916393,918668..918826,919419..919688,920345..920553,921315..921494,924170..924269,925009..925122,925828..925922,926466..926612)
location: region:915962-926612:1
so has part: feature:915962-916001:1:exon
so has part: feature:916232-916393:1:exon
so has part: feature:918668-918826:1:exon
so has part: feature:919419-919688:1:exon
so has part: feature:920345-920553:1:exon
so has part: feature:921315-921494:1:exon
so has part: feature:924170-924269:1:exon
so has part: feature:925009-925122:1:exon
so has part: feature:925828-925922:1:exon
so has part: feature:926466-926612:1:exon

XP_032868953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:915962-916001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:916232-916393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918668-918826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:919419-919688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:920345-920553:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:921315-921494:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:924170-924269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:925009-925122:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:925828-925922:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:926466-926612:1:exon

LOC116966751
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterols receptor LXR-beta-like isoform X3
translation: MSFPAVNGLDPGREDDKGAAEGVSGESRAVAPYRVKEEDDGEEVRDPASAVHTGSFPAESDGLLYISGDEPSVKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKSAQYTCKSSGKCEMDVYMRRKCQECRLRKCREAGMRDHCVLSEEQIRSKKQRKREEELVAPEVAAAEALPEATDKARLTAEQEEMIQQLVAAQQQCNKRSFSDQPKVTPWPQGNDPHNRETRQQRFAHFTELAIISVQEIVDFAKQIPGFLDLSREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKADFARAGLQFGFINPIFEFSKGMRKLQLDDAEYALLIAINIFSADRPNVEDHQLVERRQQPYVEALHSYLRIKRPKDHLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
SIO_010081: LOC116966751
subclass of: SO_0000673
so part of: LOC116966751
location: join(915962..916001,916232..916393,919419..919688,920345..920553,921315..921494,924170..924269,925009..925122,925828..925922,926466..926612)
location: region:915962-926612:1
so has part: feature:915962-916001:1:exon
so has part: feature:916232-916393:1:exon
so has part: feature:919419-919688:1:exon
so has part: feature:920345-920553:1:exon
so has part: feature:921315-921494:1:exon
so has part: feature:924170-924269:1:exon
so has part: feature:925009-925122:1:exon
so has part: feature:925828-925922:1:exon
so has part: feature:926466-926612:1:exon

XP_032868954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:915962-916001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:916232-916393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:919419-919688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:920345-920553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:921315-921494:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:924170-924269:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:925009-925122:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:925828-925922:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:926466-926612:1:exon

pold1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: pold1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 926810..1040861
location: region:926810-1040861:1
so has part: feature:926810-1040861:1:exon
subclass of: SO_0000010

116966776
type: Gene
SIO_000068: ncbigene

position:926810:1
position: 926810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040861:1
position: 1040861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926810-1040861:1:exon

pold1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pold1
product: DNA polymerase delta 1, catalytic subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033013117.1
SIO_010081: pold1
subclass of: SO_0000673
so part of: pold1
location: join(926810..926939,942261..942377,948081..948221,949783..949908,951838..952006,953904..954006,960056..960185,962823..962989,966080..966184,970648..970788,971973..972083,973035..973226,974894..974982,978483..978599,980032..980145,981807..981954,998858..998953,999860..999997,1001855..1002030,1004289..1004441,1012736..1012838,1019564..1019696,1020872..1020985,1029575..1029627,1034008..1034105,1039866..1040861)
location: region:926810-1040861:1
so has part: feature:926810-926939:1:exon
so has part: feature:942261-942377:1:exon
so has part: feature:948081-948221:1:exon
so has part: feature:949783-949908:1:exon
so has part: feature:951838-952006:1:exon
so has part: feature:953904-954006:1:exon
so has part: feature:960056-960185:1:exon
so has part: feature:962823-962989:1:exon
so has part: feature:966080-966184:1:exon
so has part: feature:970648-970788:1:exon
so has part: feature:971973-972083:1:exon
so has part: feature:973035-973226:1:exon
so has part: feature:974894-974982:1:exon
so has part: feature:978483-978599:1:exon
so has part: feature:980032-980145:1:exon
so has part: feature:981807-981954:1:exon
so has part: feature:998858-998953:1:exon
so has part: feature:999860-999997:1:exon
so has part: feature:1001855-1002030:1:exon
so has part: feature:1004289-1004441:1:exon
so has part: feature:1012736-1012838:1:exon
so has part: feature:1019564-1019696:1:exon
so has part: feature:1020872-1020985:1:exon
so has part: feature:1029575-1029627:1:exon
so has part: feature:1034008-1034105:1:exon
so has part: feature:1039866-1040861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:926810-926939:1:exon

position:926939:1
position: 926939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:942261-942377:1:exon

position:942261:1
position: 942261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942377:1
position: 942377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:948081-948221:1:exon

position:948081:1
position: 948081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948221:1
position: 948221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:949783-949908:1:exon

position:949783:1
position: 949783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949908:1
position: 949908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:951838-952006:1:exon

position:951838:1
position: 951838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952006:1
position: 952006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:953904-954006:1:exon

position:953904:1
position: 953904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954006:1
position: 954006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:960056-960185:1:exon

position:960056:1
position: 960056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960185:1
position: 960185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:962823-962989:1:exon

position:962823:1
position: 962823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962989:1
position: 962989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:966080-966184:1:exon

position:966080:1
position: 966080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966184:1
position: 966184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:970648-970788:1:exon

position:970648:1
position: 970648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970788:1
position: 970788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:971973-972083:1:exon

position:971973:1
position: 971973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972083:1
position: 972083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:973035-973226:1:exon

position:973035:1
position: 973035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973226:1
position: 973226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:974894-974982:1:exon

position:974894:1
position: 974894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974982:1
position: 974982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:978483-978599:1:exon

position:978483:1
position: 978483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978599:1
position: 978599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:980032-980145:1:exon

position:980032:1
position: 980032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980145:1
position: 980145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:981807-981954:1:exon

position:981807:1
position: 981807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981954:1
position: 981954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:998858-998953:1:exon

position:998858:1
position: 998858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998953:1
position: 998953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:999860-999997:1:exon

position:999860:1
position: 999860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999997:1
position: 999997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1001855-1002030:1:exon

position:1001855:1
position: 1001855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002030:1
position: 1002030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1004289-1004441:1:exon

position:1004289:1
position: 1004289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004441:1
position: 1004441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1012736-1012838:1:exon

position:1012736:1
position: 1012736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012838:1
position: 1012838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1019564-1019696:1:exon

position:1019564:1
position: 1019564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019696:1
position: 1019696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1020872-1020985:1:exon

position:1020872:1
position: 1020872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020985:1
position: 1020985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1029575-1029627:1:exon

position:1029575:1
position: 1029575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029627:1
position: 1029627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1034008-1034105:1:exon

position:1034008:1
position: 1034008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034105:1
position: 1034105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1039866-1040861:1:exon

position:1039866:1
position: 1039866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pold1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pold1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase delta catalytic subunit
translation: MLAGRSAKDGYRTVRERRTLYLEQWTSQGAGSGAVDIPEPDDQGNLFSSDVKKSKWQRPPVPKINPKEDSITFQQVELEYYVGTYVAGMPGNRQGPVPVTRMFGITMEGNSVCCHIHGFMPYFYVPAPAGFSPEHLHDFQRELNSIVIKDMRSNKDNISQVVLAVDICQKESMYGYGGNTKTPFLKITMALPRLIAPAKRLLEQGFYFGSMPMSNYQSYEANIDFEIRFMVDCDVVGCNWIELPAGKYRIREDQPTGHNRKKVTLAQMEVDVAWTDFVSHAAEGEWQKIAPLRVLSFDIECAGRKGIFPEADKDPVIQIANMVLRQGEKDPFIRNVFTLRSCASIVGSQVFCFENENELLKAWSEFIRVADPDIITGYNIQNFDMPYLINRAQVLKVSTFPFLGRIPTLKSVIRETAFQSRQMGRRENKVINTEGRVQFDLLQVLLRDYKLRSYSLNAVSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLMEKLMCVINYMEMARVTGVPLSYLLSRGQQIKVVSQLLRQAMKHDLVMPVVKTESGEDYTGATVIEPVKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAVDKYSISSDKFIKTPTGDQFVKASVRKGLLPEILENLLTARKKAKTELKKETDPFKQKVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTIANGYKADAKIIYGDTDSVMCKLGTQTVEESMALGREAAEWVSSHFIPPIKLEFEKVYFPYLLINKKRYAGLYFSSSPNTHDKMDCKGIETVRRDNCPLVANLINTCLQKILIDRDPQGAVEHAKDVISDLLCNRIDTSQLVITKELTRTADEYAAKQAHVELAERMRKRDAGSAPNLGDRVPYVIISAAKGAAAYMKSEDPIYVLENNIPIDTQYYLEQQLAKPLLRIFEPILGEAKAEAVLLKGEHTRCKTVLTSKVGGLMAFAKKRSTCIGCKAVLNDGGAVCSYCRSRQSELYQKEISQLKLLEEKFSRLWTQCQRCQGSLHEEVLCTSRDCPIFYMRKKVQKDLGDQEKVMVRFGPPAW
SIO_010081: pold1
subclass of: SO_0000673
so part of: pold1
location: join(926810..926939,942261..942377,948081..948221,949783..949908,951838..952006,953904..954006,960056..960185,962823..962989,966080..966184,970648..970788,971973..972083,973035..973226,974894..974982,978483..978599,980032..980145,981807..981954,998858..998953,999860..999997,1001855..1002030,1004289..1004441,1012736..1012838,1019564..1019696,1020872..1020985,1029575..1029627,1034008..1034105,1039866..1039962)
location: region:926810-1039962:1
so has part: feature:926810-926939:1:exon
so has part: feature:942261-942377:1:exon
so has part: feature:948081-948221:1:exon
so has part: feature:949783-949908:1:exon
so has part: feature:951838-952006:1:exon
so has part: feature:953904-954006:1:exon
so has part: feature:960056-960185:1:exon
so has part: feature:962823-962989:1:exon
so has part: feature:966080-966184:1:exon
so has part: feature:970648-970788:1:exon
so has part: feature:971973-972083:1:exon
so has part: feature:973035-973226:1:exon
so has part: feature:974894-974982:1:exon
so has part: feature:978483-978599:1:exon
so has part: feature:980032-980145:1:exon
so has part: feature:981807-981954:1:exon
so has part: feature:998858-998953:1:exon
so has part: feature:999860-999997:1:exon
so has part: feature:1001855-1002030:1:exon
so has part: feature:1004289-1004441:1:exon
so has part: feature:1012736-1012838:1:exon
so has part: feature:1019564-1019696:1:exon
so has part: feature:1020872-1020985:1:exon
so has part: feature:1029575-1029627:1:exon
so has part: feature:1034008-1034105:1:exon
so has part: feature:1039866-1039962:1:exon

XP_032869008.1
type: Protein
SIO_000068: ncbiprotein

position:1039962:1
position: 1039962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926810-926939:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:942261-942377:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:948081-948221:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:949783-949908:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:951838-952006:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:953904-954006:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960056-960185:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962823-962989:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:966080-966184:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:970648-970788:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:971973-972083:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:973035-973226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:974894-974982:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:978483-978599:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:980032-980145:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:981807-981954:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:998858-998953:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:999860-999997:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1001855-1002030:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1004289-1004441:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1012736-1012838:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1019564-1019696:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1020872-1020985:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1029575-1029627:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1034008-1034105:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1039866-1039962:1:exon

spib
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: spib
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1052618..1070699
location: region:1052618-1070699:1
so has part: feature:1052618-1070699:1:exon
subclass of: SO_0000010

116966965
type: Gene
SIO_000068: ncbigene

position:1052618:1
position: 1052618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070699:1
position: 1070699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052618-1070699:1:exon

spib
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: spib
product: Spi-B transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033013364.1
SIO_010081: spib
subclass of: SO_0000673
so part of: spib
location: join(1052618..1052753,1061433..1061457,1064447..1064540,1065919..1066115,1066740..1066902,1070146..1070699)
location: region:1052618-1070699:1
so has part: feature:1052618-1052753:1:exon
so has part: feature:1061433-1061457:1:exon
so has part: feature:1064447-1064540:1:exon
so has part: feature:1065919-1066115:1:exon
so has part: feature:1066740-1066902:1:exon
so has part: feature:1070146-1070699:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1052618-1052753:1:exon

position:1052753:1
position: 1052753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061433-1061457:1:exon

position:1061433:1
position: 1061433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061457:1
position: 1061457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1064447-1064540:1:exon

position:1064447:1
position: 1064447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064540:1
position: 1064540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1065919-1066115:1:exon

position:1065919:1
position: 1065919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066115:1
position: 1066115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1066740-1066902:1:exon

position:1066740:1
position: 1066740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066902:1
position: 1066902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1070146-1070699:1:exon

position:1070146:1
position: 1070146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

spib
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: spib
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Spi-B
translation: MHSLETPQVEPPQISLYAETGPYETDAYCKHQPHLYSYYVTDTEQPTDHYWASSDHHTTGYDHYEGGQFTQLQNVHVSHLQSLYPQFPLEVVATPDPIIQTHPPCPLDEDYSQVFPMLYPSYHASTDHSSPSMSEDDDYNQGSPVLEVSDGEFDENIPPRESSSHDAGVRKKVRLYQFLLELLKNGDMRDCVWWVDREKGTFQFSSKHKEMLAHRWGMQKGNRKKMTYQKMARALRNYGKTGEIRKIKKKLTYQFDGMLLGQKKSECKTSYMP
SIO_010081: spib
subclass of: SO_0000673
so part of: spib
location: join(1052731..1052753,1061433..1061457,1064447..1064540,1065919..1066115,1066740..1066902,1070146..1070465)
location: region:1052731-1070465:1
so has part: feature:1052731-1052753:1:exon
so has part: feature:1061433-1061457:1:exon
so has part: feature:1064447-1064540:1:exon
so has part: feature:1065919-1066115:1:exon
so has part: feature:1066740-1066902:1:exon
so has part: feature:1070146-1070465:1:exon

XP_032869255.1
type: Protein
SIO_000068: ncbiprotein

position:1052731:1
position: 1052731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070465:1
position: 1070465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052731-1052753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061433-1061457:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064447-1064540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065919-1066115:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1066740-1066902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070146-1070465:1:exon

mybpc2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: mybpc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1081393..1136049
location: region:1081393-1136049:1
so has part: feature:1081393-1136049:1:exon
subclass of: SO_0000010

116966742
type: Gene
SIO_000068: ncbigene

position:1081393:1
position: 1081393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136049:1
position: 1136049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081393-1136049:1:exon

mybpc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: mybpc2
product: myosin binding protein C2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033013039.1
SIO_010081: mybpc2
subclass of: SO_0000673
so part of: mybpc2
location: join(1081393..1081520,1087072..1087335,1088883..1088915,1090127..1090162,1092091..1092171,1093309..1093457,1094184..1094301,1095999..1096044,1098058..1098114,1098896..1099065,1099625..1099757,1100744..1100868,1101959..1102064,1103747..1103913,1105310..1105475,1107006..1107112,1107799..1107828,1108971..1109113,1110449..1110608,1111738..1111842,1112802..1112990,1115114..1115248,1116224..1116391,1118044..1118132,1119256..1119451,1127146..1127285,1129140..1129299,1130283..1130419,1131110..1131296,1132457..1132497,1135874..1136049)
location: region:1081393-1136049:1
so has part: feature:1081393-1081520:1:exon
so has part: feature:1087072-1087335:1:exon
so has part: feature:1088883-1088915:1:exon
so has part: feature:1090127-1090162:1:exon
so has part: feature:1092091-1092171:1:exon
so has part: feature:1093309-1093457:1:exon
so has part: feature:1094184-1094301:1:exon
so has part: feature:1095999-1096044:1:exon
so has part: feature:1098058-1098114:1:exon
so has part: feature:1098896-1099065:1:exon
so has part: feature:1099625-1099757:1:exon
so has part: feature:1100744-1100868:1:exon
so has part: feature:1101959-1102064:1:exon
so has part: feature:1103747-1103913:1:exon
so has part: feature:1105310-1105475:1:exon
so has part: feature:1107006-1107112:1:exon
so has part: feature:1107799-1107828:1:exon
so has part: feature:1108971-1109113:1:exon
so has part: feature:1110449-1110608:1:exon
so has part: feature:1111738-1111842:1:exon
so has part: feature:1112802-1112990:1:exon
so has part: feature:1115114-1115248:1:exon
so has part: feature:1116224-1116391:1:exon
so has part: feature:1118044-1118132:1:exon
so has part: feature:1119256-1119451:1:exon
so has part: feature:1127146-1127285:1:exon
so has part: feature:1129140-1129299:1:exon
so has part: feature:1130283-1130419:1:exon
so has part: feature:1131110-1131296:1:exon
so has part: feature:1132457-1132497:1:exon
so has part: feature:1135874-1136049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1081393-1081520:1:exon

position:1081520:1
position: 1081520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1087072-1087335:1:exon

position:1087072:1
position: 1087072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087335:1
position: 1087335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1088883-1088915:1:exon

position:1088883:1
position: 1088883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088915:1
position: 1088915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1090127-1090162:1:exon

position:1090127:1
position: 1090127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090162:1
position: 1090162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1092091-1092171:1:exon

position:1092091:1
position: 1092091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092171:1
position: 1092171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1093309-1093457:1:exon

position:1093309:1
position: 1093309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093457:1
position: 1093457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1094184-1094301:1:exon

position:1094184:1
position: 1094184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094301:1
position: 1094301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1095999-1096044:1:exon

position:1095999:1
position: 1095999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096044:1
position: 1096044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1098058-1098114:1:exon

position:1098058:1
position: 1098058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1098114:1
position: 1098114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1098896-1099065:1:exon

position:1098896:1
position: 1098896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099065:1
position: 1099065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1099625-1099757:1:exon

position:1099625:1
position: 1099625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099757:1
position: 1099757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1100744-1100868:1:exon

position:1100744:1
position: 1100744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100868:1
position: 1100868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1101959-1102064:1:exon

position:1101959:1
position: 1101959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102064:1
position: 1102064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1103747-1103913:1:exon

position:1103747:1
position: 1103747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103913:1
position: 1103913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1105310-1105475:1:exon

position:1105310:1
position: 1105310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105475:1
position: 1105475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1107006-1107112:1:exon

position:1107006:1
position: 1107006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107112:1
position: 1107112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1107799-1107828:1:exon

position:1107799:1
position: 1107799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107828:1
position: 1107828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1108971-1109113:1:exon

position:1108971:1
position: 1108971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109113:1
position: 1109113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1110449-1110608:1:exon

position:1110449:1
position: 1110449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110608:1
position: 1110608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1111738-1111842:1:exon

position:1111738:1
position: 1111738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111842:1
position: 1111842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1112802-1112990:1:exon

position:1112802:1
position: 1112802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112990:1
position: 1112990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1115114-1115248:1:exon

position:1115114:1
position: 1115114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115248:1
position: 1115248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1116224-1116391:1:exon

position:1116224:1
position: 1116224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116391:1
position: 1116391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1118044-1118132:1:exon

position:1118044:1
position: 1118044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118132:1
position: 1118132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1119256-1119451:1:exon

position:1119256:1
position: 1119256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119451:1
position: 1119451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1127146-1127285:1:exon

position:1127146:1
position: 1127146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127285:1
position: 1127285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1129140-1129299:1:exon

position:1129140:1
position: 1129140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129299:1
position: 1129299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1130283-1130419:1:exon

position:1130283:1
position: 1130283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130419:1
position: 1130419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1131110-1131296:1:exon

position:1131110:1
position: 1131110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131296:1
position: 1131296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1132457-1132497:1:exon

position:1132457:1
position: 1132457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132497:1
position: 1132497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1135874-1136049:1:exon

position:1135874:1
position: 1135874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mybpc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: mybpc2
product: myosin binding protein C2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033013040.1
SIO_010081: mybpc2
subclass of: SO_0000673
so part of: mybpc2
location: join(1081421..1081520,1088883..1088915,1090127..1090162,1092091..1092171,1093309..1093457,1094184..1094301,1095999..1096044,1098058..1098114,1098896..1099065,1099625..1099757,1100744..1100868,1101959..1102064,1103747..1103913,1105310..1105475,1107006..1107112,1107799..1107828,1108971..1109113,1110449..1110608,1111738..1111842,1112802..1112990,1115114..1115248,1116224..1116391,1118044..1118132,1119256..1119451,1127146..1127285,1129140..1129299,1130283..1130419,1131110..1131296,1132457..1132497,1135874..1136049)
location: region:1081421-1136049:1
so has part: feature:1081421-1081520:1:exon
so has part: feature:1088883-1088915:1:exon
so has part: feature:1090127-1090162:1:exon
so has part: feature:1092091-1092171:1:exon
so has part: feature:1093309-1093457:1:exon
so has part: feature:1094184-1094301:1:exon
so has part: feature:1095999-1096044:1:exon
so has part: feature:1098058-1098114:1:exon
so has part: feature:1098896-1099065:1:exon
so has part: feature:1099625-1099757:1:exon
so has part: feature:1100744-1100868:1:exon
so has part: feature:1101959-1102064:1:exon
so has part: feature:1103747-1103913:1:exon
so has part: feature:1105310-1105475:1:exon
so has part: feature:1107006-1107112:1:exon
so has part: feature:1107799-1107828:1:exon
so has part: feature:1108971-1109113:1:exon
so has part: feature:1110449-1110608:1:exon
so has part: feature:1111738-1111842:1:exon
so has part: feature:1112802-1112990:1:exon
so has part: feature:1115114-1115248:1:exon
so has part: feature:1116224-1116391:1:exon
so has part: feature:1118044-1118132:1:exon
so has part: feature:1119256-1119451:1:exon
so has part: feature:1127146-1127285:1:exon
so has part: feature:1129140-1129299:1:exon
so has part: feature:1130283-1130419:1:exon
so has part: feature:1131110-1131296:1:exon
so has part: feature:1132457-1132497:1:exon
so has part: feature:1135874-1136049:1:exon

position:1081421:1
position: 1081421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081421-1081520:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088883-1088915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090127-1090162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1092091-1092171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1093309-1093457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1094184-1094301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1095999-1096044:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1098058-1098114:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1098896-1099065:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1099625-1099757:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1100744-1100868:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1101959-1102064:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1103747-1103913:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1105310-1105475:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1107006-1107112:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1107799-1107828:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1108971-1109113:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1110449-1110608:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1111738-1111842:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1112802-1112990:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1115114-1115248:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1116224-1116391:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1118044-1118132:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1119256-1119451:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1127146-1127285:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1129140-1129299:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1130283-1130419:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1131110-1131296:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1132457-1132497:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1135874-1136049:1:exon

mybpc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: mybpc2
product: myosin binding protein C2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033013041.1
SIO_010081: mybpc2
subclass of: SO_0000673
so part of: mybpc2
location: join(1081455..1081520,1090127..1090162,1092091..1092171,1093309..1093457,1094184..1094301,1095999..1096044,1098058..1098114,1098896..1099065,1099625..1099757,1100744..1100868,1101959..1102064,1103747..1103913,1105310..1105475,1107006..1107112,1107799..1107828,1108971..1109113,1110449..1110608,1111738..1111842,1112802..1112990,1115114..1115248,1116224..1116391,1118044..1118132,1119256..1119451,1127146..1127285,1129140..1129299,1130283..1130419,1131110..1131296,1132457..1132497,1135874..1136049)
location: region:1081455-1136049:1
so has part: feature:1081455-1081520:1:exon
so has part: feature:1090127-1090162:1:exon
so has part: feature:1092091-1092171:1:exon
so has part: feature:1093309-1093457:1:exon
so has part: feature:1094184-1094301:1:exon
so has part: feature:1095999-1096044:1:exon
so has part: feature:1098058-1098114:1:exon
so has part: feature:1098896-1099065:1:exon
so has part: feature:1099625-1099757:1:exon
so has part: feature:1100744-1100868:1:exon
so has part: feature:1101959-1102064:1:exon
so has part: feature:1103747-1103913:1:exon
so has part: feature:1105310-1105475:1:exon
so has part: feature:1107006-1107112:1:exon
so has part: feature:1107799-1107828:1:exon
so has part: feature:1108971-1109113:1:exon
so has part: feature:1110449-1110608:1:exon
so has part: feature:1111738-1111842:1:exon
so has part: feature:1112802-1112990:1:exon
so has part: feature:1115114-1115248:1:exon
so has part: feature:1116224-1116391:1:exon
so has part: feature:1118044-1118132:1:exon
so has part: feature:1119256-1119451:1:exon
so has part: feature:1127146-1127285:1:exon
so has part: feature:1129140-1129299:1:exon
so has part: feature:1130283-1130419:1:exon
so has part: feature:1131110-1131296:1:exon
so has part: feature:1132457-1132497:1:exon
so has part: feature:1135874-1136049:1:exon

position:1081455:1
position: 1081455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081455-1081520:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1090127-1090162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1092091-1092171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1093309-1093457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1094184-1094301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1095999-1096044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098058-1098114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1098896-1099065:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1099625-1099757:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1100744-1100868:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101959-1102064:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1103747-1103913:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1105310-1105475:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1107006-1107112:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1107799-1107828:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1108971-1109113:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1110449-1110608:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1111738-1111842:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1112802-1112990:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1115114-1115248:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1116224-1116391:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1118044-1118132:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1119256-1119451:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1127146-1127285:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1129140-1129299:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1130283-1130419:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1131110-1131296:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1132457-1132497:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1135874-1136049:1:exon

mybpc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: mybpc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin-binding protein C, fast-type isoform X1
translation: MPEPKKPAGFTTKPQSQAGEPGGKAEFVAEVDKPNVKVKWQKGGKDLPAGPKYTIKSEGKKHTLVINDLNKQDDSVYMAVVGTTKEKFELQVKEPVKAEPQPEPAQVAAVPPTELPEDDAAGQAQQQQLTGIFTMKPPDTLCVQMGEALTLIAKVDASALVKKPSIKWIKGKWLDLKSKAGSVYQFKEEFDSKTKVYTYEMKIVKADKTTAGAYRCEVTSKDQFDSAAFNIDVEATEAATDDLLTSFKRTGDAGEDAGELDFSGLLKKRDVKEVAPATEEVDVWEILKNAKPCDFEKIAFQYGITDLRGMLKRLKKKKRVEKKSESFTKKLEAAYQVDKGGKIRMSIELGNPNMDVKWLKNGKEIRPSGRYIFEMIGLKRVLTIKNCTLADDAEYECVIGEDKCTADLFVKEPPVVISVPLDDQHVFVEDRVEFDCVVSEEGAVVVWSKNGVDLTRDEALRFRIKKDGKKHFLIINEVTKADAGRYKIKTNGGESDADLIVEDKILEVLQSFADLTLKAQEQAVFKCEVSDEKVTGKWLKNGVEVVASKRIHITHKGRIHKLVIDDITPDDEADYTFIPNGYALSISAKLNFLEIKVDYVPRQEPPKIHLDCTGKVVSQNTIVVVAGNKLRLDVDISGEPPPEVVWFKADQEFTETEGRCRIETKELHSSLIVEGALREDEAKYNIVVRNPSGEDKAVILVKVVDVPDAPENVKITGIGDDWCTAAWDIPKFDGGQPLTGYLLERKKKTSMRWMKLNFEPLQATQFTATRMIEGCQYEMRVFALNGIGLSPPSISSRTFMPIGTTSEPTHLIVDDVTDTTTTLKWRMPEKIGPGGLDGYLIEYAKEGSDDWTVANTKLVERLGYTVKDLPTGEKINFRVRAVNIAGKSPPAMLAQSVTIREIVQHPKIWLPRKLRQTYIKKVGQQINIMIPFQGKPRPQVIWKKEGQPLDTSQASVRNSEADTIFFVRRAERSHSGMYELSVQIENLIDTVSVKIRVVEKPQPPEALKITDVWGFNAGIEWTPPKDDGNSEIIGYTIQKADKKTMEWFTVYEHNRKPSCTISDLIMGNEYYFRVFSENICGLSEKSKVSKNTAFIQKESKNYVRPPYKEHDFSHAPKFTQPLLNRSVVAGYSTKLSCSVRGFPKPKIVWMKNKVAIGEDPKFLMKHNEGVLTLQIRKPSSFDGGNYTCKAINELGEDEVECRLEVRVPQ
SIO_010081: mybpc2
subclass of: SO_0000673
so part of: mybpc2
location: join(1081499..1081520,1087072..1087335,1088883..1088915,1090127..1090162,1092091..1092171,1093309..1093457,1094184..1094301,1095999..1096044,1098058..1098114,1098896..1099065,1099625..1099757,1100744..1100868,1101959..1102064,1103747..1103913,1105310..1105475,1107006..1107112,1107799..1107828,1108971..1109113,1110449..1110608,1111738..1111842,1112802..1112990,1115114..1115248,1116224..1116391,1118044..1118132,1119256..1119451,1127146..1127285,1129140..1129299,1130283..1130419,1131110..1131296,1132457..1132467)
location: region:1081499-1132467:1
so has part: feature:1081499-1081520:1:exon
so has part: feature:1087072-1087335:1:exon
so has part: feature:1088883-1088915:1:exon
so has part: feature:1090127-1090162:1:exon
so has part: feature:1092091-1092171:1:exon
so has part: feature:1093309-1093457:1:exon
so has part: feature:1094184-1094301:1:exon
so has part: feature:1095999-1096044:1:exon
so has part: feature:1098058-1098114:1:exon
so has part: feature:1098896-1099065:1:exon
so has part: feature:1099625-1099757:1:exon
so has part: feature:1100744-1100868:1:exon
so has part: feature:1101959-1102064:1:exon
so has part: feature:1103747-1103913:1:exon
so has part: feature:1105310-1105475:1:exon
so has part: feature:1107006-1107112:1:exon
so has part: feature:1107799-1107828:1:exon
so has part: feature:1108971-1109113:1:exon
so has part: feature:1110449-1110608:1:exon
so has part: feature:1111738-1111842:1:exon
so has part: feature:1112802-1112990:1:exon
so has part: feature:1115114-1115248:1:exon
so has part: feature:1116224-1116391:1:exon
so has part: feature:1118044-1118132:1:exon
so has part: feature:1119256-1119451:1:exon
so has part: feature:1127146-1127285:1:exon
so has part: feature:1129140-1129299:1:exon
so has part: feature:1130283-1130419:1:exon
so has part: feature:1131110-1131296:1:exon
so has part: feature:1132457-1132467:1:exon

XP_032868930.1
type: Protein
SIO_000068: ncbiprotein

position:1081499:1
position: 1081499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132467:1
position: 1132467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081499-1081520:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1087072-1087335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1088883-1088915:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090127-1090162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1092091-1092171:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1093309-1093457:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1094184-1094301:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1095999-1096044:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1098058-1098114:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1098896-1099065:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1099625-1099757:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1100744-1100868:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1101959-1102064:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1103747-1103913:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1105310-1105475:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1107006-1107112:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1107799-1107828:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1108971-1109113:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1110449-1110608:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1111738-1111842:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1112802-1112990:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1115114-1115248:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1116224-1116391:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1118044-1118132:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1119256-1119451:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1127146-1127285:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1129140-1129299:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1130283-1130419:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1131110-1131296:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1132457-1132467:1:exon

mybpc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: mybpc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin-binding protein C, fast-type isoform X2
translation: MPEPKKPVKAEPQPEPAQVAAVPPTELPEDDAAGQAQQQQLTGIFTMKPPDTLCVQMGEALTLIAKVDASALVKKPSIKWIKGKWLDLKSKAGSVYQFKEEFDSKTKVYTYEMKIVKADKTTAGAYRCEVTSKDQFDSAAFNIDVEATEAATDDLLTSFKRTGDAGEDAGELDFSGLLKKRDVKEVAPATEEVDVWEILKNAKPCDFEKIAFQYGITDLRGMLKRLKKKKRVEKKSESFTKKLEAAYQVDKGGKIRMSIELGNPNMDVKWLKNGKEIRPSGRYIFEMIGLKRVLTIKNCTLADDAEYECVIGEDKCTADLFVKEPPVVISVPLDDQHVFVEDRVEFDCVVSEEGAVVVWSKNGVDLTRDEALRFRIKKDGKKHFLIINEVTKADAGRYKIKTNGGESDADLIVEDKILEVLQSFADLTLKAQEQAVFKCEVSDEKVTGKWLKNGVEVVASKRIHITHKGRIHKLVIDDITPDDEADYTFIPNGYALSISAKLNFLEIKVDYVPRQEPPKIHLDCTGKVVSQNTIVVVAGNKLRLDVDISGEPPPEVVWFKADQEFTETEGRCRIETKELHSSLIVEGALREDEAKYNIVVRNPSGEDKAVILVKVVDVPDAPENVKITGIGDDWCTAAWDIPKFDGGQPLTGYLLERKKKTSMRWMKLNFEPLQATQFTATRMIEGCQYEMRVFALNGIGLSPPSISSRTFMPIGTTSEPTHLIVDDVTDTTTTLKWRMPEKIGPGGLDGYLIEYAKEGSDDWTVANTKLVERLGYTVKDLPTGEKINFRVRAVNIAGKSPPAMLAQSVTIREIVQHPKIWLPRKLRQTYIKKVGQQINIMIPFQGKPRPQVIWKKEGQPLDTSQASVRNSEADTIFFVRRAERSHSGMYELSVQIENLIDTVSVKIRVVEKPQPPEALKITDVWGFNAGIEWTPPKDDGNSEIIGYTIQKADKKTMEWFTVYEHNRKPSCTISDLIMGNEYYFRVFSENICGLSEKSKVSKNTAFIQKESKNYVRPPYKEHDFSHAPKFTQPLLNRSVVAGYSTKLSCSVRGFPKPKIVWMKNKVAIGEDPKFLMKHNEGVLTLQIRKPSSFDGGNYTCKAINELGEDEVECRLEVRVPQ
SIO_010081: mybpc2
subclass of: SO_0000673
so part of: mybpc2
location: join(1081499..1081520,1088883..1088915,1090127..1090162,1092091..1092171,1093309..1093457,1094184..1094301,1095999..1096044,1098058..1098114,1098896..1099065,1099625..1099757,1100744..1100868,1101959..1102064,1103747..1103913,1105310..1105475,1107006..1107112,1107799..1107828,1108971..1109113,1110449..1110608,1111738..1111842,1112802..1112990,1115114..1115248,1116224..1116391,1118044..1118132,1119256..1119451,1127146..1127285,1129140..1129299,1130283..1130419,1131110..1131296,1132457..1132467)
location: region:1081499-1132467:1
so has part: feature:1081499-1081520:1:exon
so has part: feature:1088883-1088915:1:exon
so has part: feature:1090127-1090162:1:exon
so has part: feature:1092091-1092171:1:exon
so has part: feature:1093309-1093457:1:exon
so has part: feature:1094184-1094301:1:exon
so has part: feature:1095999-1096044:1:exon
so has part: feature:1098058-1098114:1:exon
so has part: feature:1098896-1099065:1:exon
so has part: feature:1099625-1099757:1:exon
so has part: feature:1100744-1100868:1:exon
so has part: feature:1101959-1102064:1:exon
so has part: feature:1103747-1103913:1:exon
so has part: feature:1105310-1105475:1:exon
so has part: feature:1107006-1107112:1:exon
so has part: feature:1107799-1107828:1:exon
so has part: feature:1108971-1109113:1:exon
so has part: feature:1110449-1110608:1:exon
so has part: feature:1111738-1111842:1:exon
so has part: feature:1112802-1112990:1:exon
so has part: feature:1115114-1115248:1:exon
so has part: feature:1116224-1116391:1:exon
so has part: feature:1118044-1118132:1:exon
so has part: feature:1119256-1119451:1:exon
so has part: feature:1127146-1127285:1:exon
so has part: feature:1129140-1129299:1:exon
so has part: feature:1130283-1130419:1:exon
so has part: feature:1131110-1131296:1:exon
so has part: feature:1132457-1132467:1:exon

XP_032868931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1081499-1081520:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088883-1088915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090127-1090162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1092091-1092171:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1093309-1093457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1094184-1094301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1095999-1096044:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1098058-1098114:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1098896-1099065:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1099625-1099757:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1100744-1100868:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1101959-1102064:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1103747-1103913:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1105310-1105475:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1107006-1107112:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1107799-1107828:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1108971-1109113:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1110449-1110608:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1111738-1111842:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1112802-1112990:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1115114-1115248:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1116224-1116391:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1118044-1118132:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1119256-1119451:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1127146-1127285:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1129140-1129299:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1130283-1130419:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1131110-1131296:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1132457-1132467:1:exon

mybpc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: mybpc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin-binding protein C, fast-type isoform X3
translation: MPEPKKPVAAVPPTELPEDDAAGQAQQQQLTGIFTMKPPDTLCVQMGEALTLIAKVDASALVKKPSIKWIKGKWLDLKSKAGSVYQFKEEFDSKTKVYTYEMKIVKADKTTAGAYRCEVTSKDQFDSAAFNIDVEATEAATDDLLTSFKRTGDAGEDAGELDFSGLLKKRDVKEVAPATEEVDVWEILKNAKPCDFEKIAFQYGITDLRGMLKRLKKKKRVEKKSESFTKKLEAAYQVDKGGKIRMSIELGNPNMDVKWLKNGKEIRPSGRYIFEMIGLKRVLTIKNCTLADDAEYECVIGEDKCTADLFVKEPPVVISVPLDDQHVFVEDRVEFDCVVSEEGAVVVWSKNGVDLTRDEALRFRIKKDGKKHFLIINEVTKADAGRYKIKTNGGESDADLIVEDKILEVLQSFADLTLKAQEQAVFKCEVSDEKVTGKWLKNGVEVVASKRIHITHKGRIHKLVIDDITPDDEADYTFIPNGYALSISAKLNFLEIKVDYVPRQEPPKIHLDCTGKVVSQNTIVVVAGNKLRLDVDISGEPPPEVVWFKADQEFTETEGRCRIETKELHSSLIVEGALREDEAKYNIVVRNPSGEDKAVILVKVVDVPDAPENVKITGIGDDWCTAAWDIPKFDGGQPLTGYLLERKKKTSMRWMKLNFEPLQATQFTATRMIEGCQYEMRVFALNGIGLSPPSISSRTFMPIGTTSEPTHLIVDDVTDTTTTLKWRMPEKIGPGGLDGYLIEYAKEGSDDWTVANTKLVERLGYTVKDLPTGEKINFRVRAVNIAGKSPPAMLAQSVTIREIVQHPKIWLPRKLRQTYIKKVGQQINIMIPFQGKPRPQVIWKKEGQPLDTSQASVRNSEADTIFFVRRAERSHSGMYELSVQIENLIDTVSVKIRVVEKPQPPEALKITDVWGFNAGIEWTPPKDDGNSEIIGYTIQKADKKTMEWFTVYEHNRKPSCTISDLIMGNEYYFRVFSENICGLSEKSKVSKNTAFIQKESKNYVRPPYKEHDFSHAPKFTQPLLNRSVVAGYSTKLSCSVRGFPKPKIVWMKNKVAIGEDPKFLMKHNEGVLTLQIRKPSSFDGGNYTCKAINELGEDEVECRLEVRVPQ
SIO_010081: mybpc2
subclass of: SO_0000673
so part of: mybpc2
location: join(1081499..1081520,1090127..1090162,1092091..1092171,1093309..1093457,1094184..1094301,1095999..1096044,1098058..1098114,1098896..1099065,1099625..1099757,1100744..1100868,1101959..1102064,1103747..1103913,1105310..1105475,1107006..1107112,1107799..1107828,1108971..1109113,1110449..1110608,1111738..1111842,1112802..1112990,1115114..1115248,1116224..1116391,1118044..1118132,1119256..1119451,1127146..1127285,1129140..1129299,1130283..1130419,1131110..1131296,1132457..1132467)
location: region:1081499-1132467:1
so has part: feature:1081499-1081520:1:exon
so has part: feature:1090127-1090162:1:exon
so has part: feature:1092091-1092171:1:exon
so has part: feature:1093309-1093457:1:exon
so has part: feature:1094184-1094301:1:exon
so has part: feature:1095999-1096044:1:exon
so has part: feature:1098058-1098114:1:exon
so has part: feature:1098896-1099065:1:exon
so has part: feature:1099625-1099757:1:exon
so has part: feature:1100744-1100868:1:exon
so has part: feature:1101959-1102064:1:exon
so has part: feature:1103747-1103913:1:exon
so has part: feature:1105310-1105475:1:exon
so has part: feature:1107006-1107112:1:exon
so has part: feature:1107799-1107828:1:exon
so has part: feature:1108971-1109113:1:exon
so has part: feature:1110449-1110608:1:exon
so has part: feature:1111738-1111842:1:exon
so has part: feature:1112802-1112990:1:exon
so has part: feature:1115114-1115248:1:exon
so has part: feature:1116224-1116391:1:exon
so has part: feature:1118044-1118132:1:exon
so has part: feature:1119256-1119451:1:exon
so has part: feature:1127146-1127285:1:exon
so has part: feature:1129140-1129299:1:exon
so has part: feature:1130283-1130419:1:exon
so has part: feature:1131110-1131296:1:exon
so has part: feature:1132457-1132467:1:exon

XP_032868932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1081499-1081520:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1090127-1090162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1092091-1092171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1093309-1093457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1094184-1094301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1095999-1096044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1098058-1098114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1098896-1099065:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1099625-1099757:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1100744-1100868:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101959-1102064:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1103747-1103913:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1105310-1105475:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1107006-1107112:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1107799-1107828:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1108971-1109113:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1110449-1110608:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1111738-1111842:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1112802-1112990:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1115114-1115248:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1116224-1116391:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1118044-1118132:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1119256-1119451:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1127146-1127285:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1129140-1129299:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1130283-1130419:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1131110-1131296:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1132457-1132467:1:exon

emc10
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: emc10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1139057..1185523
location: region:1139057-1185523:1
so has part: feature:1139057-1185523:1:exon
subclass of: SO_0000010

116967115
type: Gene
SIO_000068: ncbigene

position:1139057:1
position: 1139057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185523:1
position: 1185523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1139057-1185523:1:exon

emc10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: emc10
product: ER membrane protein complex subunit 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033013616.1
SIO_010081: emc10
subclass of: SO_0000673
so part of: emc10
location: join(1139057..1139224,1149591..1149657,1150577..1150689,1152406..1152504,1163606..1163787,1167434..1167527,1185221..1185523)
location: region:1139057-1185523:1
so has part: feature:1139057-1139224:1:exon
so has part: feature:1149591-1149657:1:exon
so has part: feature:1150577-1150689:1:exon
so has part: feature:1152406-1152504:1:exon
so has part: feature:1163606-1163787:1:exon
so has part: feature:1167434-1167527:1:exon
so has part: feature:1185221-1185523:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1139057-1139224:1:exon

position:1139224:1
position: 1139224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1149591-1149657:1:exon

position:1149591:1
position: 1149591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149657:1
position: 1149657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1150577-1150689:1:exon

position:1150577:1
position: 1150577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150689:1
position: 1150689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1152406-1152504:1:exon

position:1152406:1
position: 1152406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152504:1
position: 1152504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1163606-1163787:1:exon

position:1163606:1
position: 1163606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163787:1
position: 1163787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1167434-1167527:1:exon

position:1167434:1
position: 1167434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167527:1
position: 1167527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1185221-1185523:1:exon

position:1185221:1
position: 1185221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

emc10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: emc10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER membrane protein complex subunit 10 isoform X1
translation: MPQPVSHSALCCSSRGPRCSSPAVAAAMEPRRGVMASGLLLLLSVFGAGLCNTRRPGDVLDPEVAGVSVLLEHSFEFDDSVRYKKRGTLLWRPGRENSLTLSQLQLTEDERVKLRDMAGTDGLYRIRIPRKLGSESSTLDYVSSFVRICALVESHLSDVITVNTDVSGNIIGVSIVTIPGSCNGAEVEDVDLEVFNTTVHLMQPILAAAPETAAFIERLEHEQAQKAKNPQEQKSFIAKYWMYIVPIVIFLMMSGAQDPNGGSGGSGGGGR
SIO_010081: emc10
subclass of: SO_0000673
so part of: emc10
location: join(1139060..1139224,1149591..1149657,1150577..1150689,1152406..1152504,1163606..1163787,1167434..1167527,1185221..1185316)
location: region:1139060-1185316:1
so has part: feature:1139060-1139224:1:exon
so has part: feature:1149591-1149657:1:exon
so has part: feature:1150577-1150689:1:exon
so has part: feature:1152406-1152504:1:exon
so has part: feature:1163606-1163787:1:exon
so has part: feature:1167434-1167527:1:exon
so has part: feature:1185221-1185316:1:exon

XP_032869507.1
type: Protein
SIO_000068: ncbiprotein

position:1139060:1
position: 1139060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185316:1
position: 1185316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1139060-1139224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149591-1149657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1150577-1150689:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152406-1152504:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1163606-1163787:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1167434-1167527:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1185221-1185316:1:exon

emc10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: emc10
product: ER membrane protein complex subunit 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033013617.1
SIO_010081: emc10
subclass of: SO_0000673
so part of: emc10
location: join(1139071..1139224,1149591..1149657,1150577..1150689,1152406..1152504,1163606..1163787,1167434..1167527,1174488..1174633,1185221..1185523)
location: region:1139071-1185523:1
so has part: feature:1139071-1139224:1:exon
so has part: feature:1149591-1149657:1:exon
so has part: feature:1150577-1150689:1:exon
so has part: feature:1152406-1152504:1:exon
so has part: feature:1163606-1163787:1:exon
so has part: feature:1167434-1167527:1:exon
so has part: feature:1174488-1174633:1:exon
so has part: feature:1185221-1185523:1:exon

position:1139071:1
position: 1139071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1139071-1139224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149591-1149657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1150577-1150689:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152406-1152504:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1163606-1163787:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1167434-1167527:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174488-1174633:1:exon

position:1174488:1
position: 1174488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174633:1
position: 1174633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1185221-1185523:1:exon

emc10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: emc10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER membrane protein complex subunit 10 isoform X2
translation: MEPRRGVMASGLLLLLSVFGAGLCNTRRPGDVLDPEVAGVSVLLEHSFEFDDSVRYKKRGTLLWRPGRENSLTLSQLQLTEDERVKLRDMAGTDGLYRIRIPRKLGSESSTLDYVSSFVRICALVESHLSDVITVNTDVSGNIIGVSIVTIPGSCNGAEVEDVDLEVFNTTVHLMQPILAAAPETAAFIERLEHEQAQKAKNPQEQKSFIAKYWHLILGGAIFLMITNTVQAPRELAAQA
SIO_010081: emc10
subclass of: SO_0000673
so part of: emc10
location: join(1139141..1139224,1149591..1149657,1150577..1150689,1152406..1152504,1163606..1163787,1167434..1167527,1174488..1174571)
location: region:1139141-1174571:1
so has part: feature:1139141-1139224:1:exon
so has part: feature:1149591-1149657:1:exon
so has part: feature:1150577-1150689:1:exon
so has part: feature:1152406-1152504:1:exon
so has part: feature:1163606-1163787:1:exon
so has part: feature:1167434-1167527:1:exon
so has part: feature:1174488-1174571:1:exon

XP_032869508.1
type: Protein
SIO_000068: ncbiprotein

position:1139141:1
position: 1139141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174571:1
position: 1174571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1139141-1139224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149591-1149657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1150577-1150689:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152406-1152504:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1163606-1163787:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1167434-1167527:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174488-1174571:1:exon

LOC116967116
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116967116
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1185530..1185816)
location: region:1185530-1185816:-1
so has part: feature:1185530-1185816:-1:exon
subclass of: SO_0000011

116967116
type: Gene
SIO_000068: ncbigene

position:1185530:-1
position: 1185530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185816:-1
position: 1185816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1185530-1185816:-1:exon

LOC116967116
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116967116
product: uncharacterized LOC116967116
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004410145.1
SIO_010081: LOC116967116
subclass of: SO_0000673
so part of: LOC116967116
location: complement(join(1185530..1185645,1185684..1185816))
location: region:1185530-1185816:-1
so has part: feature:1185684-1185816:-1:exon
so has part: feature:1185530-1185645:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1185684-1185816:-1:exon

position:1185684:-1
position: 1185684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1185530-1185645:-1:exon

position:1185645:-1
position: 1185645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116966909
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1209089..1221219
location: region:1209089-1221219:1
so has part: feature:1209089-1221219:1:exon
subclass of: SO_0000010

116966909
type: Gene
SIO_000068: ncbigene

position:1209089:1
position: 1209089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221219:1
position: 1221219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209089-1221219:1:exon

LOC116966909
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966909
product: zinc finger BED domain-containing protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033013280.1
SIO_010081: LOC116966909
subclass of: SO_0000673
so part of: LOC116966909
location: join(1209089..1209234,1211597..1211655,1212793..1213055,1215180..1215244,1217486..1217643,1218866..1221219)
location: region:1209089-1221219:1
so has part: feature:1209089-1209234:1:exon
so has part: feature:1211597-1211655:1:exon
so has part: feature:1212793-1213055:1:exon
so has part: feature:1215180-1215244:1:exon
so has part: feature:1217486-1217643:1:exon
so has part: feature:1218866-1221219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1209089-1209234:1:exon

position:1209234:1
position: 1209234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1211597-1211655:1:exon

position:1211597:1
position: 1211597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1211655:1
position: 1211655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1212793-1213055:1:exon

position:1212793:1
position: 1212793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213055:1
position: 1213055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1215180-1215244:1:exon

position:1215180:1
position: 1215180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215244:1
position: 1215244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1217486-1217643:1:exon

position:1217486:1
position: 1217486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217643:1
position: 1217643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1218866-1221219:1:exon

position:1218866:1
position: 1218866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116966909
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966909
product: zinc finger BED domain-containing protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033013282.1
SIO_010081: LOC116966909
subclass of: SO_0000673
so part of: LOC116966909
location: join(1209196..1209234,1211597..1211659,1212793..1213055,1215180..1215244,1217486..1217643,1218866..1221219)
location: region:1209196-1221219:1
so has part: feature:1209196-1209234:1:exon
so has part: feature:1211597-1211659:1:exon
so has part: feature:1212793-1213055:1:exon
so has part: feature:1215180-1215244:1:exon
so has part: feature:1217486-1217643:1:exon
so has part: feature:1218866-1221219:1:exon

position:1209196:1
position: 1209196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209196-1209234:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1211597-1211659:1:exon

position:1211659:1
position: 1211659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1212793-1213055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215180-1215244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1217486-1217643:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218866-1221219:1:exon

LOC116966909
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966909
product: zinc finger BED domain-containing protein 1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033013283.1
SIO_010081: LOC116966909
subclass of: SO_0000673
so part of: LOC116966909
location: join(1209197..1209234,1211597..1211655,1215180..1215244,1217486..1217643,1218866..1221219)
location: region:1209197-1221219:1
so has part: feature:1209197-1209234:1:exon
so has part: feature:1211597-1211655:1:exon
so has part: feature:1215180-1215244:1:exon
so has part: feature:1217486-1217643:1:exon
so has part: feature:1218866-1221219:1:exon

position:1209197:1
position: 1209197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209197-1209234:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1211597-1211655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1215180-1215244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1217486-1217643:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1218866-1221219:1:exon

LOC116966909
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein 1-like isoform X1
translation: MSWREMQVGDEACAQLEDELLFCEECRLYFRDSCPHHGAPTFVPDRMVLVCEPSRALRTLPEGLAVKERPQGGLGVWCTVTVVPRGCIFGPFDGDVLTDRNDCTVYSWALRENGSYYYMDASDETKANWMRYVACASSEEEHNMTVFQYRGKIYYRACQTIAAGNELLVWIGEEYARTLGLKLGEHFKYEFGEKELLMKLFQDLQTKVPKEMSSHKKAQGQRNCRDFVASIIQTHESSLRREVPGGALREGTRNNLVSLGRAQSRYWTFFGFQGDTLGRILDKTKIICKLCGVRLSYSGNTTNLRQHLIYKHRQEYNQLVGVTPATQKETQDHPARTPMVMTTPVGRTTRAISDFIVTDLLPLRTIEGEGFVQMMSVLEPTYKIPTVAFFAQTVLRDMYAQAKLRVMDSMKSQRHCTVSIDLWKHEQSRSYVTVSAHQVDSAFDLRNYVLSTRAVGEEGAAEKVRAALLDVANEWSIGERTWLSVMASNVDVRMAVTKLGWKTLPCIGHALQNCVDSALQQPPILRTLARCKRLMENVSSFPALSDKVGSSEVLHKFQSKTFPAGSVKWFSTYDLLQNLQDHRSFLDGVSQELQGEGLGLRDEDWQVVQEITGILKPLAIATSTLTKERFSSLSLVKPVVTSLIYKHLATNEGDSELAHDIKQAIRTDLDQWYADREVNRVLNLACALDPRFRGLDFLSQVEKVETFHALRQETAQLARLQPQPGDPEMSSCGPEPAKRPRPDSGIEFLLGDLCNVRSASVNSVNQQAEQEISGFQTSEAAALCQDPLQWWKAHHTQYPLLATAARKLLAVPATAVPGTWIFTQAGQDVYGKRSDLAPEHVDMLVFMHGNHTSA
SIO_010081: LOC116966909
subclass of: SO_0000673
so part of: LOC116966909
location: join(1209230..1209234,1211597..1211655,1212793..1213055,1215180..1215244,1217486..1217643,1218866..1220880)
location: region:1209230-1220880:1
so has part: feature:1209230-1209234:1:exon
so has part: feature:1211597-1211655:1:exon
so has part: feature:1212793-1213055:1:exon
so has part: feature:1215180-1215244:1:exon
so has part: feature:1217486-1217643:1:exon
so has part: feature:1218866-1220880:1:exon

XP_032869171.1
type: Protein
SIO_000068: ncbiprotein

position:1209230:1
position: 1209230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220880:1
position: 1220880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209230-1209234:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1211597-1211655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1212793-1213055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215180-1215244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1217486-1217643:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218866-1220880:1:exon

LOC116966909
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966909
product: zinc finger BED domain-containing protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033013281.1
SIO_010081: LOC116966909
subclass of: SO_0000673
so part of: LOC116966909
location: join(1209411..1209518,1211597..1211655,1212793..1213055,1215180..1215244,1217486..1217643,1218866..1221219)
location: region:1209411-1221219:1
so has part: feature:1209411-1209518:1:exon
so has part: feature:1211597-1211655:1:exon
so has part: feature:1212793-1213055:1:exon
so has part: feature:1215180-1215244:1:exon
so has part: feature:1217486-1217643:1:exon
so has part: feature:1218866-1221219:1:exon

position:1209411:1
position: 1209411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209411-1209518:1:exon

position:1209518:1
position: 1209518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1211597-1211655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1212793-1213055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215180-1215244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1217486-1217643:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218866-1221219:1:exon

LOC116966909
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein 1-like isoform X2
translation: MQVGDEACAQLEDELLFCEECRLYFRDSCPHHGAPTFVPDRMVLVCEPSRALRTLPEGLAVKERPQGGLGVWCTVTVVPRGCIFGPFDGDVLTDRNDCTVYSWALRENGSYYYMDASDETKANWMRYVACASSEEEHNMTVFQYRGKIYYRACQTIAAGNELLVWIGEEYARTLGLKLGEHFKYEFGEKELLMKLFQDLQTKVPKEMSSHKKAQGQRNCRDFVASIIQTHESSLRREVPGGALREGTRNNLVSLGRAQSRYWTFFGFQGDTLGRILDKTKIICKLCGVRLSYSGNTTNLRQHLIYKHRQEYNQLVGVTPATQKETQDHPARTPMVMTTPVGRTTRAISDFIVTDLLPLRTIEGEGFVQMMSVLEPTYKIPTVAFFAQTVLRDMYAQAKLRVMDSMKSQRHCTVSIDLWKHEQSRSYVTVSAHQVDSAFDLRNYVLSTRAVGEEGAAEKVRAALLDVANEWSIGERTWLSVMASNVDVRMAVTKLGWKTLPCIGHALQNCVDSALQQPPILRTLARCKRLMENVSSFPALSDKVGSSEVLHKFQSKTFPAGSVKWFSTYDLLQNLQDHRSFLDGVSQELQGEGLGLRDEDWQVVQEITGILKPLAIATSTLTKERFSSLSLVKPVVTSLIYKHLATNEGDSELAHDIKQAIRTDLDQWYADREVNRVLNLACALDPRFRGLDFLSQVEKVETFHALRQETAQLARLQPQPGDPEMSSCGPEPAKRPRPDSGIEFLLGDLCNVRSASVNSVNQQAEQEISGFQTSEAAALCQDPLQWWKAHHTQYPLLATAARKLLAVPATAVPGTWIFTQAGQDVYGKRSDLAPEHVDMLVFMHGNHTSA
SIO_010081: LOC116966909
subclass of: SO_0000673
so part of: LOC116966909
location: join(1211607..1211655,1212793..1213055,1215180..1215244,1217486..1217643,1218866..1220880)
location: region:1211607-1220880:1
so has part: feature:1211607-1211655:1:exon
so has part: feature:1212793-1213055:1:exon
so has part: feature:1215180-1215244:1:exon
so has part: feature:1217486-1217643:1:exon
so has part: feature:1218866-1220880:1:exon

XP_032869172.1
type: Protein
SIO_000068: ncbiprotein

position:1211607:1
position: 1211607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1211607-1211655:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1212793-1213055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1215180-1215244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1217486-1217643:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1218866-1220880:1:exon

LOC116966909
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein 1-like isoform X3
translation: MSCSVICEECRLYFRDSCPHHGAPTFVPDRMVLVCEPSRALRTLPEGLAVKERPQGGLGVWCTVTVVPRGCIFGPFDGDVLTDRNDCTVYSWALRENGSYYYMDASDETKANWMRYVACASSEEEHNMTVFQYRGKIYYRACQTIAAGNELLVWIGEEYARTLGLKLGEHFKYEFGEKELLMKLFQDLQTKVPKEMSSHKKAQGQRNCRDFVASIIQTHESSLRREVPGGALREGTRNNLVSLGRAQSRYWTFFGFQGDTLGRILDKTKIICKLCGVRLSYSGNTTNLRQHLIYKHRQEYNQLVGVTPATQKETQDHPARTPMVMTTPVGRTTRAISDFIVTDLLPLRTIEGEGFVQMMSVLEPTYKIPTVAFFAQTVLRDMYAQAKLRVMDSMKSQRHCTVSIDLWKHEQSRSYVTVSAHQVDSAFDLRNYVLSTRAVGEEGAAEKVRAALLDVANEWSIGERTWLSVMASNVDVRMAVTKLGWKTLPCIGHALQNCVDSALQQPPILRTLARCKRLMENVSSFPALSDKVGSSEVLHKFQSKTFPAGSVKWFSTYDLLQNLQDHRSFLDGVSQELQGEGLGLRDEDWQVVQEITGILKPLAIATSTLTKERFSSLSLVKPVVTSLIYKHLATNEGDSELAHDIKQAIRTDLDQWYADREVNRVLNLACALDPRFRGLDFLSQVEKVETFHALRQETAQLARLQPQPGDPEMSSCGPEPAKRPRPDSGIEFLLGDLCNVRSASVNSVNQQAEQEISGFQTSEAAALCQDPLQWWKAHHTQYPLLATAARKLLAVPATAVPGTWIFTQAGQDVYGKRSDLAPEHVDMLVFMHGNHTSA
SIO_010081: LOC116966909
subclass of: SO_0000673
so part of: LOC116966909
location: join(1211644..1211659,1212793..1213055,1215180..1215244,1217486..1217643,1218866..1220880)
location: region:1211644-1220880:1
so has part: feature:1211644-1211659:1:exon
so has part: feature:1212793-1213055:1:exon
so has part: feature:1215180-1215244:1:exon
so has part: feature:1217486-1217643:1:exon
so has part: feature:1218866-1220880:1:exon

XP_032869173.1
type: Protein
SIO_000068: ncbiprotein

position:1211644:1
position: 1211644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1211644-1211659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1212793-1213055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1215180-1215244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1217486-1217643:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1218866-1220880:1:exon

LOC116966909
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein 1-like isoform X4
translation: MSCSLRENGSYYYMDASDETKANWMRYVACASSEEEHNMTVFQYRGKIYYRACQTIAAGNELLVWIGEEYARTLGLKLGEHFKYEFGEKELLMKLFQDLQTKVPKEMSSHKKAQGQRNCRDFVASIIQTHESSLRREVPGGALREGTRNNLVSLGRAQSRYWTFFGFQGDTLGRILDKTKIICKLCGVRLSYSGNTTNLRQHLIYKHRQEYNQLVGVTPATQKETQDHPARTPMVMTTPVGRTTRAISDFIVTDLLPLRTIEGEGFVQMMSVLEPTYKIPTVAFFAQTVLRDMYAQAKLRVMDSMKSQRHCTVSIDLWKHEQSRSYVTVSAHQVDSAFDLRNYVLSTRAVGEEGAAEKVRAALLDVANEWSIGERTWLSVMASNVDVRMAVTKLGWKTLPCIGHALQNCVDSALQQPPILRTLARCKRLMENVSSFPALSDKVGSSEVLHKFQSKTFPAGSVKWFSTYDLLQNLQDHRSFLDGVSQELQGEGLGLRDEDWQVVQEITGILKPLAIATSTLTKERFSSLSLVKPVVTSLIYKHLATNEGDSELAHDIKQAIRTDLDQWYADREVNRVLNLACALDPRFRGLDFLSQVEKVETFHALRQETAQLARLQPQPGDPEMSSCGPEPAKRPRPDSGIEFLLGDLCNVRSASVNSVNQQAEQEISGFQTSEAAALCQDPLQWWKAHHTQYPLLATAARKLLAVPATAVPGTWIFTQAGQDVYGKRSDLAPEHVDMLVFMHGNHTSA
SIO_010081: LOC116966909
subclass of: SO_0000673
so part of: LOC116966909
location: join(1211644..1211655,1215180..1215244,1217486..1217643,1218866..1220880)
location: region:1211644-1220880:1
so has part: feature:1211644-1211655:1:exon
so has part: feature:1215180-1215244:1:exon
so has part: feature:1217486-1217643:1:exon
so has part: feature:1218866-1220880:1:exon

XP_032869174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1211644-1211655:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1215180-1215244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1217486-1217643:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1218866-1220880:1:exon

lrrc4b
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: lrrc4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1279725..1289037)
location: region:1279725-1289037:-1
so has part: feature:1279725-1289037:-1:exon
subclass of: SO_0000010

116967066
type: Gene
SIO_000068: ncbigene

position:1279725:-1
position: 1279725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1289037:-1
position: 1289037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279725-1289037:-1:exon

lrrc4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: lrrc4b
product: leucine rich repeat containing 4B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033013533.1
SIO_010081: lrrc4b
subclass of: SO_0000673
so part of: lrrc4b
location: complement(join(1279725..1282668,1289027..1289037))
location: region:1279725-1289037:-1
so has part: feature:1289027-1289037:-1:exon
so has part: feature:1279725-1282668:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1289027-1289037:-1:exon

position:1289027:-1
position: 1289027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1279725-1282668:-1:exon

position:1282668:-1
position: 1282668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lrrc4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: lrrc4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 4B
translation: MGAMMMMMTKAHQTQRMRINVCRTVSRLVLVVLWTLSLLGGLAQPHVCPKGCSCSNQFSKVICTRFELREVPSEISTNTRYLNLQENVIQVIKADTFKQLRHLEILQLSKNMIRQVEVGAFNGLTSLNTLELFDNRLTTVPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKKLEYISDAAFEGLVNLRYLNLGMCNLAEIPNLTPLLRLEELELSGNRLEVIQPGSFQGLTSLRKLWLMHAQVQLIERNAFDDLQSLEELNLSHNNLTSLPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHSPPGLKARYLGELDQSHFTCYAPVIVEPPADLNVTEGMAAELKCRAATSMTSVNWMTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGLYTCLVSNSAGNATASATLNVSLAEGGLTGGLGSGGGSGGSNSYSYFTTVTVETVEVVDDPRSTEQQAGPTPSGASAYSPSSPSSSTTPQSAFTVPLATEPGDHGLAGLDDVMKTTKIIIGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGQARTVEIINVDDELAGSAPTDSCLALPADHLNHYATYKAHYNNNTAAGTTNPTAPLNCTKNPLHNSVHEPLLFKSSSKENVQETQI
SIO_010081: lrrc4b
subclass of: SO_0000673
so part of: lrrc4b
location: complement(1280636..1282618)
location: region:1280636-1282618:-1
so has part: feature:1280636-1282618:-1:exon

XP_032869424.1
type: Protein
SIO_000068: ncbiprotein

position:1280636:-1
position: 1280636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282618:-1
position: 1282618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1280636-1282618:-1:exon

fam71e1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: fam71e1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1479691..1484511
location: region:1479691-1484511:1
so has part: feature:1479691-1484511:1:exon
subclass of: SO_0000010

116966778
type: Gene
SIO_000068: ncbigene

position:1479691:1
position: 1479691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484511:1
position: 1484511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479691-1484511:1:exon

fam71e1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fam71e1
product: family with sequence similarity 71 member E1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 18% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033013118.1
SIO_010081: fam71e1
subclass of: SO_0000673
so part of: fam71e1
location: join(1479691..1479852,1480587..1480774,1484002..1484299,1484446..1484511)
location: region:1479691-1484511:1
so has part: feature:1479691-1479852:1:exon
so has part: feature:1480587-1480774:1:exon
so has part: feature:1484002-1484299:1:exon
so has part: feature:1484446-1484511:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1479691-1479852:1:exon

position:1479852:1
position: 1479852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1480587-1480774:1:exon

position:1480587:1
position: 1480587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480774:1
position: 1480774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1484002-1484299:1:exon

position:1484002:1
position: 1484002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484299:1
position: 1484299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1484446-1484511:1:exon

position:1484446:1
position: 1484446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fam71e1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fam71e1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM71E1
translation: MVSLDSDPTVLCGPLAKQKICTEAPTPGALQQHLFYGEYDPFKYAPIFESDFIQVTKKGEVLSIHNQVTVVTMGVTSTSPNFSLPNVMLLARPLDSFSEITCSCKVSTDRCPMELTRLFPLSFVNISIHDVYNRRLRLKLANGRAFYLQLYIHPECENEVFERWMKLVNLLRTSPEEVYGYDAVTPEIECILEQASAETSATELSEWQLEPPEMSPLVIALTTPRSTSPSSSRRSVH
SIO_010081: fam71e1
subclass of: SO_0000673
so part of: fam71e1
location: join(1479691..1479852,1480587..1480774,1484002..1484299,1484446..1484511)
location: region:1479691-1484511:1
so has part: feature:1479691-1479852:1:exon
so has part: feature:1480587-1480774:1:exon
so has part: feature:1484002-1484299:1:exon
so has part: feature:1484446-1484511:1:exon

XP_032869009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1479691-1479852:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1480587-1480774:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1484002-1484299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1484446-1484511:1:exon

LOC116966901
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1485245..1488730
location: region:1485245-1488730:1
so has part: feature:1485245-1488730:1:exon
subclass of: SO_0000010

116966901
type: Gene
SIO_000068: ncbigene

position:1485245:1
position: 1485245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1488730:1
position: 1488730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1485245-1488730:1:exon

LOC116966901
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966901
product: DNA ligase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033013268.1
SIO_010081: LOC116966901
subclass of: SO_0000673
so part of: LOC116966901
location: join(1485245..1485561,1486569..1486594,1487639..1488730)
location: region:1485245-1488730:1
so has part: feature:1485245-1485561:1:exon
so has part: feature:1486569-1486594:1:exon
so has part: feature:1487639-1488730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1485245-1485561:1:exon

position:1485561:1
position: 1485561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1486569-1486594:1:exon

position:1486569:1
position: 1486569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486594:1
position: 1486594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1487639-1488730:1:exon

position:1487639:1
position: 1487639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116966901
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA ligase 1-like
translation: MREFYEASRASSKKSEKSDKSKKAKPGEKGDRTEKADKPEDCSERTQSRRSKKSASSKAGESEGETESIPDFTQEHEPWPRVDPPQPKKKTRGPIGFNFFKGEKGEKGEKGEKGEVVEKGSKEKLPQEEPRRAKSVTRHTLEFEDEGEEIEERKEEKEKGNKKRSDASKSRMKDKSKVKEEKGEREKKKQKDKEDKEREKGEKQKEKERQSKEKLEKLEKRRLERDDKAQKEKDKGGQVVKDKETRQREKEEKQREKEVKMKEKEEKKQQEQEERKQSVVADKKDKEKKEKRPRDKEEKEKKSKSKIDKEKDMNGSAREVKSVKAV
SIO_010081: LOC116966901
subclass of: SO_0000673
so part of: LOC116966901
location: join(1485311..1485561,1486569..1486594,1487639..1488342)
location: region:1485311-1488342:1
so has part: feature:1485311-1485561:1:exon
so has part: feature:1486569-1486594:1:exon
so has part: feature:1487639-1488342:1:exon

XP_032869159.1
type: Protein
SIO_000068: ncbiprotein

position:1485311:1
position: 1485311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1488342:1
position: 1488342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1485311-1485561:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1486569-1486594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1487639-1488342:1:exon

LOC116966927
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1492046..1518490)
location: region:1492046-1518490:-1
so has part: feature:1492046-1518490:-1:exon
subclass of: SO_0000010

116966927
type: Gene
SIO_000068: ncbigene

position:1492046:-1
position: 1492046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1518490:-1
position: 1518490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1492046-1518490:-1:exon

LOC116966927
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966927
product: serine/arginine-rich splicing factor 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033013308.1
SIO_010081: LOC116966927
subclass of: SO_0000673
so part of: LOC116966927
location: complement(join(1492046..1495813,1498970..1499062,1509168..1509311,1510606..1510823,1518384..1518490))
location: region:1492046-1518490:-1
so has part: feature:1518384-1518490:-1:exon
so has part: feature:1510606-1510823:-1:exon
so has part: feature:1509168-1509311:-1:exon
so has part: feature:1498970-1499062:-1:exon
so has part: feature:1492046-1495813:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1518384-1518490:-1:exon

position:1518384:-1
position: 1518384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1510606-1510823:-1:exon

position:1510606:-1
position: 1510606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1510823:-1
position: 1510823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1509168-1509311:-1:exon

position:1509168:-1
position: 1509168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1509311:-1
position: 1509311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1498970-1499062:-1:exon

position:1498970:-1
position: 1498970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499062:-1
position: 1499062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1492046-1495813:-1:exon

position:1495813:-1
position: 1495813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116966927
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966927
product: serine/arginine-rich splicing factor 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033013307.1
SIO_010081: LOC116966927
subclass of: SO_0000673
so part of: LOC116966927
location: complement(join(1492046..1495813,1498970..1499062,1509168..1509311,1510606..1510821,1518388..1518452))
location: region:1492046-1518452:-1
so has part: feature:1518388-1518452:-1:exon
so has part: feature:1510606-1510821:-1:exon
so has part: feature:1509168-1509311:-1:exon
so has part: feature:1498970-1499062:-1:exon
so has part: feature:1492046-1495813:-1:exon

position:1518452:-1
position: 1518452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1518388-1518452:-1:exon

position:1518388:-1
position: 1518388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1510606-1510821:-1:exon

position:1510821:-1
position: 1510821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1509168-1509311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1498970-1499062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1492046-1495813:-1:exon

LOC116966927
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: LOC116966927
product: serine/arginine-rich splicing factor 3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XR_004410093.1
SIO_010081: LOC116966927
so part of: LOC116966927
location: complement(join(1495766..1495813,1498970..1499062,1502717..1503318,1509168..1509311,1510606..1510821,1518388..1518452))
location: region:1495766-1518452:-1
so has part: feature:1518388-1518452:-1:exon
so has part: feature:1510606-1510821:-1:exon
so has part: feature:1509168-1509311:-1:exon
so has part: feature:1502717-1503318:-1:exon
so has part: feature:1498970-1499062:-1:exon
so has part: feature:1495766-1495813:-1:exon

position:1495766:-1
position: 1495766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1518388-1518452:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1510606-1510821:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1509168-1509311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1502717-1503318:-1:exon

position:1502717:-1
position: 1502717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1503318:-1
position: 1503318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1498970-1499062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1495766-1495813:-1:exon

LOC116966927
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 3-like
translation: MMRRDSCPLDCKVYVGDLGTNGNKTELERSFSYYGPLRNVWVARNPPGFAFIEFEDPRDAADAVRELDGRTLCGVRVRVELSSGERRKRYRGPPPPWTRRPRYDDSRYRSPQRRRYSRSRSRENRHRERSISRDRERREPSRSFSRSHSRSRSIERK
SIO_010081: LOC116966927
subclass of: SO_0000673
so part of: LOC116966927
location: complement(join(1495786..1495813,1498970..1499062,1509168..1509311,1510606..1510814))
location: region:1495786-1510814:-1
so has part: feature:1510606-1510814:-1:exon
so has part: feature:1509168-1509311:-1:exon
so has part: feature:1498970-1499062:-1:exon
so has part: feature:1495786-1495813:-1:exon

XP_032869198.1
type: Protein
SIO_000068: ncbiprotein

position:1495786:-1
position: 1495786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1510814:-1
position: 1510814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1510606-1510814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1509168-1509311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1498970-1499062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1495786-1495813:-1:exon

LOC116966927
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 3-like
translation: MMRRDSCPLDCKVYVGDLGTNGNKTELERSFSYYGPLRNVWVARNPPGFAFIEFEDPRDAADAVRELDGRTLCGVRVRVELSSGERRKRYRGPPPPWTRRPRYDDSRYRSPQRRRYSRSRSRENRHRERSISRDRERREPSRSFSRSHSRSRSIERK
SIO_010081: LOC116966927
subclass of: SO_0000673
so part of: LOC116966927
location: complement(join(1495786..1495813,1498970..1499062,1509168..1509311,1510606..1510814))
location: region:1495786-1510814:-1
so has part: feature:1510606-1510814:-1:exon
so has part: feature:1509168-1509311:-1:exon
so has part: feature:1498970-1499062:-1:exon
so has part: feature:1495786-1495813:-1:exon

XP_032869199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1510606-1510814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1509168-1509311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1498970-1499062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1495786-1495813:-1:exon

LOC116966951
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1574278..1578571)
location: region:1574278-1578571:-1
so has part: feature:1574278-1578571:-1:exon
subclass of: SO_0000011

116966951
type: Gene
SIO_000068: ncbigene

position:1574278:-1
position: 1574278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1578571:-1
position: 1578571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1574278-1578571:-1:exon

LOC116966951
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116966951
product: uncharacterized LOC116966951, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004410099.1
SIO_010081: LOC116966951
subclass of: SO_0000673
so part of: LOC116966951
location: complement(join(1574278..1574855,1575521..1575644,1578441..1578571))
location: region:1574278-1578571:-1
so has part: feature:1578441-1578571:-1:exon
so has part: feature:1575521-1575644:-1:exon
so has part: feature:1574278-1574855:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1578441-1578571:-1:exon

position:1578441:-1
position: 1578441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1575521-1575644:-1:exon

position:1575521:-1
position: 1575521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575644:-1
position: 1575644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1574278-1574855:-1:exon

position:1574855:-1
position: 1574855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116966951
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116966951
product: uncharacterized LOC116966951, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_004410098.1
SIO_010081: LOC116966951
subclass of: SO_0000673
so part of: LOC116966951
location: complement(join(1574406..1574766,1575521..1575644,1578441..1578571))
location: region:1574406-1578571:-1
so has part: feature:1578441-1578571:-1:exon
so has part: feature:1575521-1575644:-1:exon
so has part: feature:1574406-1574766:-1:exon

position:1574406:-1
position: 1574406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1578441-1578571:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1575521-1575644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1574406-1574766:-1:exon

position:1574766:-1
position: 1574766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116966779
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116966779
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1834653..1854759)
location: region:1834653-1854759:-1
so has part: feature:1834653-1854759:-1:exon
subclass of: SO_0000010

116966779
type: Gene
SIO_000068: ncbigene

position:1834653:-1
position: 1834653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1854759:-1
position: 1854759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1834653-1854759:-1:exon

LOC116966779
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116966779
product: uncharacterized LOC116966779
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033013119.1
SIO_010081: LOC116966779
subclass of: SO_0000673
so part of: LOC116966779
location: complement(join(1834653..1835727,1836643..1836740,1837777..1838351,1839397..1839538,1841199..1841342,1842952..1843011,1845092..1845193,1846277..1846394,1854469..1854759))
location: region:1834653-1854759:-1
so has part: feature:1854469-1854759:-1:exon
so has part: feature:1846277-1846394:-1:exon
so has part: feature:1845092-1845193:-1:exon
so has part: feature:1842952-1843011:-1:exon
so has part: feature:1841199-1841342:-1:exon
so has part: feature:1839397-1839538:-1:exon
so has part: feature:1837777-1838351:-1:exon
so has part: feature:1836643-1836740:-1:exon
so has part: feature:1834653-1835727:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1854469-1854759:-1:exon

position:1854469:-1
position: 1854469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1846277-1846394:-1:exon

position:1846277:-1
position: 1846277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1846394:-1
position: 1846394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1845092-1845193:-1:exon

position:1845092:-1
position: 1845092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1845193:-1
position: 1845193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1842952-1843011:-1:exon

position:1842952:-1
position: 1842952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1843011:-1
position: 1843011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1841199-1841342:-1:exon

position:1841199:-1
position: 1841199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1841342:-1
position: 1841342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1839397-1839538:-1:exon

position:1839397:-1
position: 1839397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1839538:-1
position: 1839538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1837777-1838351:-1:exon

position:1837777:-1
position: 1837777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1838351:-1
position: 1838351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1836643-1836740:-1:exon

position:1836643:-1
position: 1836643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1836740:-1
position: 1836740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1834653-1835727:-1:exon

position:1835727:-1
position: 1835727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116966779
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116966779
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116966779
translation: MKFSHVCPTSSVKKQRVSLKELIATFLVVSLVGSSGACNFEWGKSMTNSYNDSIKELRDILPTDYNLTVYLPNSTGMASCCLNLQALLSLNRSLSHLHRNSVFPLQNLVATVINELQVIKDCPVMESSNCRVTQWNSTHLLKTLHGNLQSFDAEFDSKQCNFGVCVLHTCSPGQGNTVLTTTAGSTVTSVDGLGHFTDRADQMPTSPIAVTNPPSPSGCTPPNSSGNNPDPSAVNGSPANMPDSTDATPSAPTDALNNASTVRNGSLATSTPSHGPEPSSANASLTNGTNASQVNVSQTSGGDQSLANSTSPNPGAEGKFLASVDCLTEEVSTPRSRMATVVMVVSVLVNAILLGFLLRKRRRQAAAQMTEMEPLSSVGVELWSERRRSRS
SIO_010081: LOC116966779
subclass of: SO_0000673
so part of: LOC116966779
location: complement(join(1836657..1836740,1837777..1838351,1839397..1839538,1841199..1841342,1842952..1843011,1845092..1845193,1846277..1846345))
location: region:1836657-1846345:-1
so has part: feature:1846277-1846345:-1:exon
so has part: feature:1845092-1845193:-1:exon
so has part: feature:1842952-1843011:-1:exon
so has part: feature:1841199-1841342:-1:exon
so has part: feature:1839397-1839538:-1:exon
so has part: feature:1837777-1838351:-1:exon
so has part: feature:1836657-1836740:-1:exon

XP_032869010.1
type: Protein
SIO_000068: ncbiprotein

position:1836657:-1
position: 1836657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1846345:-1
position: 1846345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1846277-1846345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1845092-1845193:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1842952-1843011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1841199-1841342:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1839397-1839538:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1837777-1838351:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1836657-1836740:-1:exon

aldh16a1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: aldh16a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1894672..1936680)
location: region:1894672-1936680:-1
so has part: feature:1894672-1936680:-1:exon
subclass of: SO_0000010

116967106
type: Gene
SIO_000068: ncbigene

position:1894672:-1
position: 1894672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1936680:-1
position: 1936680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1894672-1936680:-1:exon

aldh16a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: aldh16a1
product: aldehyde dehydrogenase 16 family member A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033013605.1
SIO_010081: aldh16a1
subclass of: SO_0000673
so part of: aldh16a1
location: complement(join(1894672..1894904,1905484..1905609,1907797..1907982,1909027..1909231,1910490..1910657,1912331..1912494,1913441..1913546,1914551..1914687,1916711..1916809,1918068..1918265,1921752..1921904,1922072..1922256,1923618..1923695,1927520..1927698,1930544..1930670,1932809..1932911,1936542..1936680))
location: region:1894672-1936680:-1
so has part: feature:1936542-1936680:-1:exon
so has part: feature:1932809-1932911:-1:exon
so has part: feature:1930544-1930670:-1:exon
so has part: feature:1927520-1927698:-1:exon
so has part: feature:1923618-1923695:-1:exon
so has part: feature:1922072-1922256:-1:exon
so has part: feature:1921752-1921904:-1:exon
so has part: feature:1918068-1918265:-1:exon
so has part: feature:1916711-1916809:-1:exon
so has part: feature:1914551-1914687:-1:exon
so has part: feature:1913441-1913546:-1:exon
so has part: feature:1912331-1912494:-1:exon
so has part: feature:1910490-1910657:-1:exon
so has part: feature:1909027-1909231:-1:exon
so has part: feature:1907797-1907982:-1:exon
so has part: feature:1905484-1905609:-1:exon
so has part: feature:1894672-1894904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1936542-1936680:-1:exon

position:1936542:-1
position: 1936542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1932809-1932911:-1:exon

position:1932809:-1
position: 1932809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1932911:-1
position: 1932911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1930544-1930670:-1:exon

position:1930544:-1
position: 1930544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1930670:-1
position: 1930670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1927520-1927698:-1:exon

position:1927520:-1
position: 1927520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1927698:-1
position: 1927698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1923618-1923695:-1:exon

position:1923618:-1
position: 1923618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1923695:-1
position: 1923695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1922072-1922256:-1:exon

position:1922072:-1
position: 1922072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1922256:-1
position: 1922256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1921752-1921904:-1:exon

position:1921752:-1
position: 1921752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1921904:-1
position: 1921904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1918068-1918265:-1:exon

position:1918068:-1
position: 1918068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1918265:-1
position: 1918265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1916711-1916809:-1:exon

position:1916711:-1
position: 1916711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1916809:-1
position: 1916809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1914551-1914687:-1:exon

position:1914551:-1
position: 1914551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1914687:-1
position: 1914687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1913441-1913546:-1:exon

position:1913441:-1
position: 1913441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1913546:-1
position: 1913546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1912331-1912494:-1:exon