Amblyraja radiata isolate CabotCenter1 chromosome 34, sAmbRad1.1.pri, whole genome shotgun sequence.
type: Entry
definition: Amblyraja radiata isolate CabotCenter1 chromosome 34, sAmbRad1.1.pri, whole genome shotgun sequence.
sequence version: NC_045989.1
sequence date: 2021-04-05
sequence: sequence
division: CON
label: NC_045989.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA610638
dblink: SAMN09948523
keyword: WGS
keyword: RefSeq
source: Amblyraja radiata (thorny skate)
organism: Amblyraja radiata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Amblyraja.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021399.1.\nAssembly name: sAmbRad1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/21. The original whole-genome shotgun project has the\naccession JAAGWR000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 13-JAN-2020\nAssembly Method :: Canu v. 1.7; purge_haplotigs v. bitbucket\n 7.10.2018; scaff10x v. 4.1.0; Bionano\n Solve DLS v. 3.3; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes Illumina polishing v.\n 1.3.1; purge_dups v.\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n gEVAL manual curation v. 2020-01-13; VGP\n assembly pipeline v. 1.5\nAssembly Name :: sAmbRad1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 128.24x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Amblyraja radiata Updated Annotation\n Release 100.20210331\nAnnotation Version :: 100.20210331\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 26768200
topology: linear
so has quality: SO_0000987
location: 1..26768200
location: region:1-26768200:1
RO_0002162: 386614

NC_045989
type: RefSeq
SIO_000068: refseq

PRJNA610638
type: BioProject
SIO_000068: bioproject

SAMN09948523
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26768200:1
position: 26768200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-26768200:1:source
so part of: sequence
organism: Amblyraja radiata
mol type: genomic DNA
isolate: CabotCenter1
chromosome: 34
sex: male
tissue type: testis, liver
country: USA: Gulf of Main
lat lon: 43.1336 N 68.3266 W
collection date: 2017-09-18
collected by: Jeff Kneebone

386614
type: Taxonomy
SIO_000068: taxonomy

LOC116991602
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(141704..142826)
location: region:141704-142826:-1
so has part: feature:141704-142826:-1:exon
subclass of: SO_0000011

116991602
type: Gene
SIO_000068: ncbigene

position:141704:-1
position: 141704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142826:-1
position: 142826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141704-142826:-1:exon

LOC116991602
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991602
product: uncharacterized LOC116991602
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004416834.1
SIO_010081: LOC116991602
subclass of: SO_0000673
so part of: LOC116991602
location: complement(join(141704..141970,142793..142826))
location: region:141704-142826:-1
so has part: feature:142793-142826:-1:exon
so has part: feature:141704-141970:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142793-142826:-1:exon

position:142793:-1
position: 142793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141704-141970:-1:exon

position:141970:-1
position: 141970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116991559
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 250270..263788
location: region:250270-263788:1
so has part: feature:250270-263788:1:exon
subclass of: SO_0000011

116991559
type: Gene
SIO_000068: ncbigene

position:250270:1
position: 250270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263788:1
position: 263788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250270-263788:1:exon

LOC116991559
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991559
product: uncharacterized LOC116991559
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416825.1
SIO_010081: LOC116991559
subclass of: SO_0000673
so part of: LOC116991559
location: join(250270..250354,262995..263076,263722..263788)
location: region:250270-263788:1
so has part: feature:250270-250354:1:exon
so has part: feature:262995-263076:1:exon
so has part: feature:263722-263788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250270-250354:1:exon

position:250354:1
position: 250354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262995-263076:1:exon

position:262995:1
position: 262995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263076:1
position: 263076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:263722-263788:1:exon

position:263722:1
position: 263722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991701
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 299091..312780
location: region:299091-312780:1
so has part: feature:299091-312780:1:exon
subclass of: SO_0000011

116991701
type: Gene
SIO_000068: ncbigene

position:299091:1
position: 299091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312780:1
position: 312780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299091-312780:1:exon

LOC116991701
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991701
product: uncharacterized LOC116991701
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004416877.1
SIO_010081: LOC116991701
subclass of: SO_0000673
so part of: LOC116991701
location: join(299091..299226,305648..305729,312615..312780)
location: region:299091-312780:1
so has part: feature:299091-299226:1:exon
so has part: feature:305648-305729:1:exon
so has part: feature:312615-312780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299091-299226:1:exon

position:299226:1
position: 299226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:305648-305729:1:exon

position:305648:1
position: 305648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305729:1
position: 305729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:312615-312780:1:exon

position:312615:1
position: 312615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991437
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991437
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 312931..319650
location: region:312931-319650:1
so has part: feature:312931-319650:1:exon
subclass of: SO_0000011

116991437
type: Gene
SIO_000068: ncbigene

position:312931:1
position: 312931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319650:1
position: 319650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312931-319650:1:exon

LOC116991437
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991437
product: uncharacterized LOC116991437
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004416794.1
SIO_010081: LOC116991437
subclass of: SO_0000673
so part of: LOC116991437
location: join(312931..312983,318674..318967,319499..319650)
location: region:312931-319650:1
so has part: feature:312931-312983:1:exon
so has part: feature:318674-318967:1:exon
so has part: feature:319499-319650:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:312931-312983:1:exon

position:312983:1
position: 312983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318674-318967:1:exon

position:318674:1
position: 318674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318967:1
position: 318967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:319499-319650:1:exon

position:319499:1
position: 319499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991576
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 362935..371062
location: region:362935-371062:1
so has part: feature:362935-371062:1:exon
subclass of: SO_0000011

116991576
type: Gene
SIO_000068: ncbigene

position:362935:1
position: 362935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371062:1
position: 371062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362935-371062:1:exon

LOC116991576
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991576
product: uncharacterized LOC116991576
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416827.1
SIO_010081: LOC116991576
subclass of: SO_0000673
so part of: LOC116991576
location: join(362935..363060,370269..370350,370996..371062)
location: region:362935-371062:1
so has part: feature:362935-363060:1:exon
so has part: feature:370269-370350:1:exon
so has part: feature:370996-371062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362935-363060:1:exon

position:363060:1
position: 363060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370269-370350:1:exon

position:370269:1
position: 370269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370350:1
position: 370350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:370996-371062:1:exon

position:370996:1
position: 370996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991459
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991459
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 371134..385285
location: region:371134-385285:1
so has part: feature:371134-385285:1:exon
subclass of: SO_0000010

116991459
type: Gene
SIO_000068: ncbigene

position:371134:1
position: 371134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385285:1
position: 385285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371134-385285:1:exon

LOC116991459
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991459
product: sialic acid-binding Ig-like lectin 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033050093.1
SIO_010081: LOC116991459
subclass of: SO_0000673
so part of: LOC116991459
location: join(371134..371140,371224..371361,378962..379014,379113..379245,379779..380060,385146..385285)
location: region:371134-385285:1
so has part: feature:371134-371140:1:exon
so has part: feature:371224-371361:1:exon
so has part: feature:378962-379014:1:exon
so has part: feature:379113-379245:1:exon
so has part: feature:379779-380060:1:exon
so has part: feature:385146-385285:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:371134-371140:1:exon

position:371140:1
position: 371140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:371224-371361:1:exon

position:371224:1
position: 371224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371361:1
position: 371361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:378962-379014:1:exon

position:378962:1
position: 378962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379014:1
position: 379014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:379113-379245:1:exon

position:379113:1
position: 379113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379245:1
position: 379245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:379779-380060:1:exon

position:379779:1
position: 379779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380060:1
position: 380060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:385146-385285:1:exon

position:385146:1
position: 385146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991459
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991459
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sialic acid-binding Ig-like lectin 10
translation: MGTLRDGNCSLVIYNIRQEDEGPYHFRIDFNNNNDRFSFFPVTRLRVSDFTDKPSIFPVETVEGKTWGDKLTYTSVVSLTPALKHHRQNLTCRFRYRTVSSEQTLTLTVQYSPQNLSITSSDKVNKSWVSIKEGNSTAILCSVQSFPASNLTWRHLGVTMNRTSSNNELWLEFPQVTPRLTGVYQCVAENKHGTTERSVTLAIEQFFLLDIFGAKSRRAAGKPVMDRGEIPVQNAEARVSGGRRVRYPSC
SIO_010081: LOC116991459
subclass of: SO_0000673
so part of: LOC116991459
location: join(371134..371140,371224..371361,378962..379014,379113..379245,379779..380060,385146..385285)
location: region:371134-385285:1
so has part: feature:371134-371140:1:exon
so has part: feature:371224-371361:1:exon
so has part: feature:378962-379014:1:exon
so has part: feature:379113-379245:1:exon
so has part: feature:379779-380060:1:exon
so has part: feature:385146-385285:1:exon

XP_032905984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371134-371140:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:371224-371361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:378962-379014:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:379113-379245:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379779-380060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:385146-385285:1:exon

LOC116991511
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991511
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 572654..573967
location: region:572654-573967:1
so has part: feature:572654-573967:1:exon
subclass of: SO_0000011

116991511
type: Gene
SIO_000068: ncbigene

position:572654:1
position: 572654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573967:1
position: 573967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572654-573967:1:exon

LOC116991511
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991511
product: uncharacterized LOC116991511
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_004416808.1
SIO_010081: LOC116991511
subclass of: SO_0000673
so part of: LOC116991511
location: join(572654..572879,573701..573967)
location: region:572654-573967:1
so has part: feature:572654-572879:1:exon
so has part: feature:573701-573967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:572654-572879:1:exon

position:572879:1
position: 572879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:573701-573967:1:exon

position:573701:1
position: 573701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991549
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 711298..722627
location: region:711298-722627:1
so has part: feature:711298-722627:1:exon
subclass of: SO_0000011

116991549
type: Gene
SIO_000068: ncbigene

position:711298:1
position: 711298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722627:1
position: 722627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:711298-722627:1:exon

LOC116991549
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991549
product: uncharacterized LOC116991549
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004416823.1
SIO_010081: LOC116991549
subclass of: SO_0000673
so part of: LOC116991549
location: join(711298..711320,713940..713941,722552..722627)
location: region:711298-722627:1
so has part: feature:711298-711320:1:exon
so has part: feature:713940-713941:1:exon
so has part: feature:722552-722627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:711298-711320:1:exon

position:711320:1
position: 711320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:713940-713941:1:exon

position:713940:1
position: 713940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713941:1
position: 713941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:722552-722627:1:exon

position:722552:1
position: 722552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991548
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 846529..853668
location: region:846529-853668:1
so has part: feature:846529-853668:1:exon
subclass of: SO_0000011

116991548
type: Gene
SIO_000068: ncbigene

position:846529:1
position: 846529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853668:1
position: 853668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:846529-853668:1:exon

LOC116991548
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991548
product: uncharacterized LOC116991548
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004416822.1
SIO_010081: LOC116991548
subclass of: SO_0000673
so part of: LOC116991548
location: join(846529..846700,853457..853668)
location: region:846529-853668:1
so has part: feature:846529-846700:1:exon
so has part: feature:853457-853668:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:846529-846700:1:exon

position:846700:1
position: 846700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:853457-853668:1:exon

position:853457:1
position: 853457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991523
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(993867..1001372)
location: region:993867-1001372:-1
so has part: feature:993867-1001372:-1:exon
subclass of: SO_0000011

116991523
type: Gene
SIO_000068: ncbigene

position:993867:-1
position: 993867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001372:-1
position: 1001372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:993867-1001372:-1:exon

LOC116991523
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991523
product: uncharacterized LOC116991523
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004416812.1
SIO_010081: LOC116991523
subclass of: SO_0000673
so part of: LOC116991523
location: complement(join(993867..994078,1001119..1001372))
location: region:993867-1001372:-1
so has part: feature:1001119-1001372:-1:exon
so has part: feature:993867-994078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1001119-1001372:-1:exon

position:1001119:-1
position: 1001119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:993867-994078:-1:exon

position:994078:-1
position: 994078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

agbl1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: agbl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1497332..1829666
location: region:1497332-1829666:1
so has part: feature:1497332-1829666:1:exon
subclass of: SO_0000010

116991490
type: Gene
SIO_000068: ncbigene

position:1497332:1
position: 1497332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1829666:1
position: 1829666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1497332-1829666:1:exon

agbl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: agbl1
product: AGBL carboxypeptidase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033050120.1
SIO_010081: agbl1
subclass of: SO_0000673
so part of: agbl1
location: join(1497332..1497621,1513797..1513860,1516769..1516915,1518267..1518398,1524539..1524632,1544635..1544672,1545762..1545970,1549812..1549986,1551341..1551423,1555221..1555337,1568190..1568815,1578169..1578246,1593802..1593894,1596927..1597075,1603195..1603282,1613190..1613334,1618459..1618609,1647892..1648072,1721422..1721551,1722117..1722248,1726483..1726659,1753312..1753466,1828552..1829666)
location: region:1497332-1829666:1
so has part: feature:1497332-1497621:1:exon
so has part: feature:1513797-1513860:1:exon
so has part: feature:1516769-1516915:1:exon
so has part: feature:1518267-1518398:1:exon
so has part: feature:1524539-1524632:1:exon
so has part: feature:1544635-1544672:1:exon
so has part: feature:1545762-1545970:1:exon
so has part: feature:1549812-1549986:1:exon
so has part: feature:1551341-1551423:1:exon
so has part: feature:1555221-1555337:1:exon
so has part: feature:1568190-1568815:1:exon
so has part: feature:1578169-1578246:1:exon
so has part: feature:1593802-1593894:1:exon
so has part: feature:1596927-1597075:1:exon
so has part: feature:1603195-1603282:1:exon
so has part: feature:1613190-1613334:1:exon
so has part: feature:1618459-1618609:1:exon
so has part: feature:1647892-1648072:1:exon
so has part: feature:1721422-1721551:1:exon
so has part: feature:1722117-1722248:1:exon
so has part: feature:1726483-1726659:1:exon
so has part: feature:1753312-1753466:1:exon
so has part: feature:1828552-1829666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1497332-1497621:1:exon

position:1497621:1
position: 1497621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1513797-1513860:1:exon

position:1513797:1
position: 1513797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513860:1
position: 1513860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1516769-1516915:1:exon

position:1516769:1
position: 1516769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1516915:1
position: 1516915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1518267-1518398:1:exon

position:1518267:1
position: 1518267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518398:1
position: 1518398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1524539-1524632:1:exon

position:1524539:1
position: 1524539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1524632:1
position: 1524632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1544635-1544672:1:exon

position:1544635:1
position: 1544635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1544672:1
position: 1544672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1545762-1545970:1:exon

position:1545762:1
position: 1545762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1545970:1
position: 1545970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1549812-1549986:1:exon

position:1549812:1
position: 1549812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1549986:1
position: 1549986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1551341-1551423:1:exon

position:1551341:1
position: 1551341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1551423:1
position: 1551423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1555221-1555337:1:exon

position:1555221:1
position: 1555221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1555337:1
position: 1555337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1568190-1568815:1:exon

position:1568190:1
position: 1568190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1568815:1
position: 1568815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1578169-1578246:1:exon

position:1578169:1
position: 1578169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1578246:1
position: 1578246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1593802-1593894:1:exon

position:1593802:1
position: 1593802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1593894:1
position: 1593894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1596927-1597075:1:exon

position:1596927:1
position: 1596927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1597075:1
position: 1597075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1603195-1603282:1:exon

position:1603195:1
position: 1603195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1603282:1
position: 1603282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1613190-1613334:1:exon

position:1613190:1
position: 1613190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1613334:1
position: 1613334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1618459-1618609:1:exon

position:1618459:1
position: 1618459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1618609:1
position: 1618609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1647892-1648072:1:exon

position:1647892:1
position: 1647892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648072:1
position: 1648072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1721422-1721551:1:exon

position:1721422:1
position: 1721422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1721551:1
position: 1721551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1722117-1722248:1:exon

position:1722117:1
position: 1722117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1722248:1
position: 1722248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1726483-1726659:1:exon

position:1726483:1
position: 1726483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1726659:1
position: 1726659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1753312-1753466:1:exon

position:1753312:1
position: 1753312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1753466:1
position: 1753466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1828552-1829666:1:exon

position:1828552:1
position: 1828552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

agbl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: agbl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic carboxypeptidase 4
translation: MAEVNAASENTTGLEVLLSTLKNSHDMKSTHSILQILDALLSAGTVKRVSYLITKGGSEALLHTLVNVTQVLPLDYDIILPLICLIVKVGQRDKRFGQKAQEIGALSEILNITKCSLPQAKYVTPCLWIIKICASSVTAGAAMGKSGITRFVLNLLSPYTTTNTKAIRAATEALSSLLKSKWNSRRAADSGYIHRLLKLYEDWHQRDTANHYVPIQRALLKCINNITSLRKGKKSFLEADGMRVLLNASRACGSSPDLHPVIKLTTQIMRKCHPKQHLPLPKLQSCYSFVSPNAAHSQLLVGPSDTVQEDVTAEENEDQDDDDDLNENEEPGCSEDEDDLETDLSRLKPNPELDRPVEELKQYEQLCPELVGYFQDSDLDDQSFQDEDAPCSMVFTPSGPLHQEDSRVWHRDGFGKDSPKPHNPFRNRTHQTSAYASGIGGEGGPKGFPKNHFTDPTKPSITNHSKDKMNEMHLDIQKGGADLLRINPALHSPHVHSGACEKHGGALNPSWAIGGEHEGQNSVHKLLKVCKELIPFHDPYIYTINAEETKSVANYKTLAFPDYWGHVPPHSKEPLVGRWCGGQRAKIFEDIQRLVCSGDVLNRVILDIESPSLVAPGDDSSLKFFSNFESGNLRKAIQIRKYEYDLLMNADINTTLQQQWFYFEISSMRAGISYRFNIINCEKTNSQFNYGMQPVLYSVHEALCGRAQWVRAGTDISYYRNHYFTQGAEGKGGKETAFYTLTFNITFPHSKDVCYLAYHYPYTYSTLMTHLYLLEQSINSDQVYFRHQVLCSTLGGNDCPVITITATPGTQPEQLQQFWNRQYIVLTGRVHPGESNASWVMKGTLEFLISNNPIARCLRDAYIFKIIPMLNPDGVINGCCRCSLSGEDLNRQWSEPTPDLQPTIYHTKGLLSYMKSIGKTPLVYCDYHGHSRKKNSFMYGCSVKETLWQSESSIDTATLKEDIGYRAIPRILEKICPTFAINRCCFLVQKSRESTARVVVWREIGVLRSYTMESTYCGCDQGRYNGLQIGTRELEEMGGKFCTALLKLSPNMPLTCQDAALLNLDSELNNDKNFSRNDVSVDDEPPCPEDIDYFTDNGTEDEDDAIDLRPEVTNC
SIO_010081: agbl1
subclass of: SO_0000673
so part of: agbl1
location: join(1497556..1497621,1513797..1513860,1516769..1516915,1518267..1518398,1524539..1524632,1544635..1544672,1545762..1545970,1549812..1549986,1551341..1551423,1555221..1555337,1568190..1568815,1578169..1578246,1593802..1593894,1596927..1597075,1603195..1603282,1613190..1613334,1618459..1618609,1647892..1648072,1721422..1721551,1722117..1722248,1726483..1726659,1753312..1753466,1828552..1828669)
location: region:1497556-1828669:1
so has part: feature:1497556-1497621:1:exon
so has part: feature:1513797-1513860:1:exon
so has part: feature:1516769-1516915:1:exon
so has part: feature:1518267-1518398:1:exon
so has part: feature:1524539-1524632:1:exon
so has part: feature:1544635-1544672:1:exon
so has part: feature:1545762-1545970:1:exon
so has part: feature:1549812-1549986:1:exon
so has part: feature:1551341-1551423:1:exon
so has part: feature:1555221-1555337:1:exon
so has part: feature:1568190-1568815:1:exon
so has part: feature:1578169-1578246:1:exon
so has part: feature:1593802-1593894:1:exon
so has part: feature:1596927-1597075:1:exon
so has part: feature:1603195-1603282:1:exon
so has part: feature:1613190-1613334:1:exon
so has part: feature:1618459-1618609:1:exon
so has part: feature:1647892-1648072:1:exon
so has part: feature:1721422-1721551:1:exon
so has part: feature:1722117-1722248:1:exon
so has part: feature:1726483-1726659:1:exon
so has part: feature:1753312-1753466:1:exon
so has part: feature:1828552-1828669:1:exon

XP_032906011.1
type: Protein
SIO_000068: ncbiprotein

position:1497556:1
position: 1497556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1828669:1
position: 1828669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1497556-1497621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1513797-1513860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1516769-1516915:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1518267-1518398:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1524539-1524632:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1544635-1544672:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1545762-1545970:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1549812-1549986:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1551341-1551423:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1555221-1555337:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1568190-1568815:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1578169-1578246:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1593802-1593894:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1596927-1597075:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1603195-1603282:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1613190-1613334:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1618459-1618609:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1647892-1648072:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1721422-1721551:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1722117-1722248:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1726483-1726659:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1753312-1753466:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1828552-1828669:1:exon

LOC116991782
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991782
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2244522..2244628
location: region:2244522-2244628:1
so has part: feature:2244522-2244628:1:exon
subclass of: SO_0000623

116991782
type: Gene
SIO_000068: ncbigene

position:2244522:1
position: 2244522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2244628:1
position: 2244628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2244522-2244628:1:exon

LOC116991782
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snRNA
gene: LOC116991782
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004416899.1
SIO_010081: LOC116991782
subclass of: SO_0000673
so part of: LOC116991782
location: 2244522..2244628
location: region:2244522-2244628:1
so has part: feature:2244522-2244628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2244522-2244628:1:exon

ntrk3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ntrk3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2277439..3276952)
location: region:2277439-3276952:-1
so has part: feature:2277439-3276952:-1:exon
subclass of: SO_0000010

116991604
type: Gene
SIO_000068: ncbigene

position:2277439:-1
position: 2277439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3276952:-1
position: 3276952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2277439-3276952:-1:exon

ntrk3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ntrk3
product: neurotrophic receptor tyrosine kinase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033050347.1
SIO_010081: ntrk3
subclass of: SO_0000673
so part of: ntrk3
location: complement(join(2277439..2278040,2283588..2283746,2311597..2311837,2376452..2376624,2379444..2379574,2517950..2518141,2673757..2673859,2695188..2695258,2697726..2697749,2732875..2733174,2735330..2735471,2758931..2759073,2771901..2772055,2779694..2779762,3011334..3011405,3022397..3022471,3276478..3276952))
location: region:2277439-3276952:-1
so has part: feature:3276478-3276952:-1:exon
so has part: feature:3022397-3022471:-1:exon
so has part: feature:3011334-3011405:-1:exon
so has part: feature:2779694-2779762:-1:exon
so has part: feature:2771901-2772055:-1:exon
so has part: feature:2758931-2759073:-1:exon
so has part: feature:2735330-2735471:-1:exon
so has part: feature:2732875-2733174:-1:exon
so has part: feature:2697726-2697749:-1:exon
so has part: feature:2695188-2695258:-1:exon
so has part: feature:2673757-2673859:-1:exon
so has part: feature:2517950-2518141:-1:exon
so has part: feature:2379444-2379574:-1:exon
so has part: feature:2376452-2376624:-1:exon
so has part: feature:2311597-2311837:-1:exon
so has part: feature:2283588-2283746:-1:exon
so has part: feature:2277439-2278040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3276478-3276952:-1:exon

position:3276478:-1
position: 3276478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3022397-3022471:-1:exon

position:3022397:-1
position: 3022397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3022471:-1
position: 3022471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3011334-3011405:-1:exon

position:3011334:-1
position: 3011334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3011405:-1
position: 3011405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2779694-2779762:-1:exon

position:2779694:-1
position: 2779694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2779762:-1
position: 2779762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2771901-2772055:-1:exon

position:2771901:-1
position: 2771901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2772055:-1
position: 2772055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2758931-2759073:-1:exon

position:2758931:-1
position: 2758931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2759073:-1
position: 2759073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2735330-2735471:-1:exon

position:2735330:-1
position: 2735330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2735471:-1
position: 2735471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2732875-2733174:-1:exon

position:2732875:-1
position: 2732875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2733174:-1
position: 2733174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2697726-2697749:-1:exon

position:2697726:-1
position: 2697726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2697749:-1
position: 2697749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2695188-2695258:-1:exon

position:2695188:-1
position: 2695188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2695258:-1
position: 2695258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2673757-2673859:-1:exon

position:2673757:-1
position: 2673757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2673859:-1
position: 2673859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2517950-2518141:-1:exon

position:2517950:-1
position: 2517950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2518141:-1
position: 2518141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2379444-2379574:-1:exon

position:2379444:-1
position: 2379444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2379574:-1
position: 2379574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2376452-2376624:-1:exon

position:2376452:-1
position: 2376452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2376624:-1
position: 2376624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2311597-2311837:-1:exon

position:2311597:-1
position: 2311597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2311837:-1
position: 2311837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2283588-2283746:-1:exon

position:2283588:-1
position: 2283588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2283746:-1
position: 2283746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2277439-2278040:-1:exon

position:2278040:-1
position: 2278040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ntrk3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ntrk3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NT-3 growth factor receptor isoform X1
translation: MTRWAAPPSRGILWRILWLSCSLQNCFWVLGCPGNCKCKISQIYCNQPDNVTIFPVLDLQEMANVTEIHIENQKSLQTLNALDMEPYIGLQNLTIINSGLRSIAPRAFAKNPHLHYINLSGNRLISLSWQPFRTLRLSQLVLVRNLFNCSCDIRWIQLWQDAGEAQLGHQLLYCRTETTTILLSHMNVTQCELPEISVSHSNLLVKAGEDAVVTCNGSGSPLPDVDWNVTHVHSIGIHQTNNNLTTVSAVNLTLFNIDPEDNGKLLTCIAENVVGMTNASVLLHVHYAPDIVELTEPEQRHMHCIQFTVYGNPLPTIHWQHQGRKLNETDYIKTNVYEDTKDWLHGCLLFDKPTHYNNGNYTLVAENELGIDTDTVYAHFLGVPFPEILENPFYVPSFEVTTGPPVSVTHKPEGDTFAVSIAVGLAAFGCFLLLILFIMFNKYGRRSKYGMKGPVAVMSGEEDSGSPLHHINHGIITPSSMDIGPDAVVIGMTRIPVIENPQYFRQTHSLGKHPETYVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDNMLVAVKTLKDATVSARKDFQREAELLTNLRHEHIVKFYGVCVDGDPLIMVFEYMKNGDLNKFLRARGPDAMILVDGQPRMKGEMTIAQMLNIASQIASGMVYLGSQHFVHRDLATRNCLVGGTVQVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNNEVIECITQGRVLERPRVCPKEVYDIMLRCWQREPQQRLSIKDIHQILQGLGKTSPIYLDILG
SIO_010081: ntrk3
subclass of: SO_0000673
so part of: ntrk3
location: complement(join(2277855..2278040,2283588..2283746,2311597..2311837,2376452..2376624,2379444..2379574,2517950..2518141,2673757..2673859,2695188..2695258,2697726..2697749,2732875..2733174,2735330..2735471,2758931..2759073,2771901..2772055,2779694..2779762,3011334..3011405,3022397..3022471,3276478..3276680))
location: region:2277855-3276680:-1
so has part: feature:3276478-3276680:-1:exon
so has part: feature:3022397-3022471:-1:exon
so has part: feature:3011334-3011405:-1:exon
so has part: feature:2779694-2779762:-1:exon
so has part: feature:2771901-2772055:-1:exon
so has part: feature:2758931-2759073:-1:exon
so has part: feature:2735330-2735471:-1:exon
so has part: feature:2732875-2733174:-1:exon
so has part: feature:2697726-2697749:-1:exon
so has part: feature:2695188-2695258:-1:exon
so has part: feature:2673757-2673859:-1:exon
so has part: feature:2517950-2518141:-1:exon
so has part: feature:2379444-2379574:-1:exon
so has part: feature:2376452-2376624:-1:exon
so has part: feature:2311597-2311837:-1:exon
so has part: feature:2283588-2283746:-1:exon
so has part: feature:2277855-2278040:-1:exon

XP_032906238.1
type: Protein
SIO_000068: ncbiprotein

position:2277855:-1
position: 2277855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3276680:-1
position: 3276680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3276478-3276680:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3022397-3022471:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3011334-3011405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2779694-2779762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2771901-2772055:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2758931-2759073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2735330-2735471:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2732875-2733174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2697726-2697749:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2695188-2695258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2673757-2673859:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2517950-2518141:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2379444-2379574:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2376452-2376624:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2311597-2311837:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2283588-2283746:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2277855-2278040:-1:exon

ntrk3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ntrk3
product: neurotrophic receptor tyrosine kinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033050348.1
SIO_010081: ntrk3
subclass of: SO_0000673
so part of: ntrk3
location: complement(join(2277855..2278040,2283588..2283746,2311597..2311837,2376452..2376624,2379444..2379574,2517950..2518141,2673757..2673859,2695188..2695258,2697726..2697749,2732875..2733174,2735330..2735471,2758931..2759073,2771901..2772055,2779694..2779762,3011334..3011405,3022397..3022471,3035314..3035318))
location: region:2277855-3035318:-1
so has part: feature:3035314-3035318:-1:exon
so has part: feature:3022397-3022471:-1:exon
so has part: feature:3011334-3011405:-1:exon
so has part: feature:2779694-2779762:-1:exon
so has part: feature:2771901-2772055:-1:exon
so has part: feature:2758931-2759073:-1:exon
so has part: feature:2735330-2735471:-1:exon
so has part: feature:2732875-2733174:-1:exon
so has part: feature:2697726-2697749:-1:exon
so has part: feature:2695188-2695258:-1:exon
so has part: feature:2673757-2673859:-1:exon
so has part: feature:2517950-2518141:-1:exon
so has part: feature:2379444-2379574:-1:exon
so has part: feature:2376452-2376624:-1:exon
so has part: feature:2311597-2311837:-1:exon
so has part: feature:2283588-2283746:-1:exon
so has part: feature:2277855-2278040:-1:exon

position:3035318:-1
position: 3035318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3035314-3035318:-1:exon

position:3035314:-1
position: 3035314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3022397-3022471:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3011334-3011405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2779694-2779762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2771901-2772055:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2758931-2759073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2735330-2735471:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2732875-2733174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2697726-2697749:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2695188-2695258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2673757-2673859:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2517950-2518141:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2379444-2379574:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2376452-2376624:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2311597-2311837:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2283588-2283746:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2277855-2278040:-1:exon

ntrk3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ntrk3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NT-3 growth factor receptor isoform X2
translation: MEPYIGLQNLTIINSGLRSIAPRAFAKNPHLHYINLSGNRLISLSWQPFRTLRLSQLVLVRNLFNCSCDIRWIQLWQDAGEAQLGHQLLYCRTETTTILLSHMNVTQCELPEISVSHSNLLVKAGEDAVVTCNGSGSPLPDVDWNVTHVHSIGIHQTNNNLTTVSAVNLTLFNIDPEDNGKLLTCIAENVVGMTNASVLLHVHYAPDIVELTEPEQRHMHCIQFTVYGNPLPTIHWQHQGRKLNETDYIKTNVYEDTKDWLHGCLLFDKPTHYNNGNYTLVAENELGIDTDTVYAHFLGVPFPEILENPFYVPSFEVTTGPPVSVTHKPEGDTFAVSIAVGLAAFGCFLLLILFIMFNKYGRRSKYGMKGPVAVMSGEEDSGSPLHHINHGIITPSSMDIGPDAVVIGMTRIPVIENPQYFRQTHSLGKHPETYVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDNMLVAVKTLKDATVSARKDFQREAELLTNLRHEHIVKFYGVCVDGDPLIMVFEYMKNGDLNKFLRARGPDAMILVDGQPRMKGEMTIAQMLNIASQIASGMVYLGSQHFVHRDLATRNCLVGGTVQVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNNEVIECITQGRVLERPRVCPKEVYDIMLRCWQREPQQRLSIKDIHQILQGLGKTSPIYLDILG
SIO_010081: ntrk3
subclass of: SO_0000673
so part of: ntrk3
location: complement(join(2277855..2278040,2283588..2283746,2311597..2311837,2376452..2376624,2379444..2379574,2517950..2518141,2673757..2673859,2695188..2695258,2697726..2697749,2732875..2733174,2735330..2735471,2758931..2759073,2771901..2772055,2779694..2779762,3011334..3011405,3022397..3022425))
location: region:2277855-3022425:-1
so has part: feature:3022397-3022425:-1:exon
so has part: feature:3011334-3011405:-1:exon
so has part: feature:2779694-2779762:-1:exon
so has part: feature:2771901-2772055:-1:exon
so has part: feature:2758931-2759073:-1:exon
so has part: feature:2735330-2735471:-1:exon
so has part: feature:2732875-2733174:-1:exon
so has part: feature:2697726-2697749:-1:exon
so has part: feature:2695188-2695258:-1:exon
so has part: feature:2673757-2673859:-1:exon
so has part: feature:2517950-2518141:-1:exon
so has part: feature:2379444-2379574:-1:exon
so has part: feature:2376452-2376624:-1:exon
so has part: feature:2311597-2311837:-1:exon
so has part: feature:2283588-2283746:-1:exon
so has part: feature:2277855-2278040:-1:exon

XP_032906239.1
type: Protein
SIO_000068: ncbiprotein

position:3022425:-1
position: 3022425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3022397-3022425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3011334-3011405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2779694-2779762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2771901-2772055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2758931-2759073:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2735330-2735471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2732875-2733174:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2697726-2697749:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2695188-2695258:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2673757-2673859:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2517950-2518141:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2379444-2379574:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2376452-2376624:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2311597-2311837:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2283588-2283746:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2277855-2278040:-1:exon

LOC116991606
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991606
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2874309..2876254
location: region:2874309-2876254:1
so has part: feature:2874309-2876254:1:exon
subclass of: SO_0000011

116991606
type: Gene
SIO_000068: ncbigene

position:2874309:1
position: 2874309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2876254:1
position: 2876254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2874309-2876254:1:exon

LOC116991606
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991606
product: uncharacterized LOC116991606
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004416837.1
SIO_010081: LOC116991606
subclass of: SO_0000673
so part of: LOC116991606
location: join(2874309..2874427,2875591..2875594,2876244..2876254)
location: region:2874309-2876254:1
so has part: feature:2874309-2874427:1:exon
so has part: feature:2875591-2875594:1:exon
so has part: feature:2876244-2876254:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2874309-2874427:1:exon

position:2874427:1
position: 2874427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2875591-2875594:1:exon

position:2875591:1
position: 2875591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2875594:1
position: 2875594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2876244-2876254:1:exon

position:2876244:1
position: 2876244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991605
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991605
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3240672..3263545)
location: region:3240672-3263545:-1
so has part: feature:3240672-3263545:-1:exon
subclass of: SO_0000011

116991605
type: Gene
SIO_000068: ncbigene

position:3240672:-1
position: 3240672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3263545:-1
position: 3263545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3240672-3263545:-1:exon

LOC116991605
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991605
product: uncharacterized LOC116991605
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416835.1
SIO_010081: LOC116991605
subclass of: SO_0000673
so part of: LOC116991605
location: complement(join(3240672..3240683,3255654..3255661,3263440..3263545))
location: region:3240672-3263545:-1
so has part: feature:3263440-3263545:-1:exon
so has part: feature:3255654-3255661:-1:exon
so has part: feature:3240672-3240683:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3263440-3263545:-1:exon

position:3263440:-1
position: 3263440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3255654-3255661:-1:exon

position:3255654:-1
position: 3255654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3255661:-1
position: 3255661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3240672-3240683:-1:exon

position:3240683:-1
position: 3240683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mrpl46
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: mrpl46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3954991..3983893)
location: region:3954991-3983893:-1
so has part: feature:3954991-3983893:-1:exon
subclass of: SO_0000010

116991458
type: Gene
SIO_000068: ncbigene

position:3954991:-1
position: 3954991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3983893:-1
position: 3983893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3954991-3983893:-1:exon

mrpl46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: mrpl46
product: mitochondrial ribosomal protein L46
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033050092.1
SIO_010081: mrpl46
subclass of: SO_0000673
so part of: mrpl46
location: complement(join(3954991..3955307,3955674..3955847,3967773..3967971,3983609..3983893))
location: region:3954991-3983893:-1
so has part: feature:3983609-3983893:-1:exon
so has part: feature:3967773-3967971:-1:exon
so has part: feature:3955674-3955847:-1:exon
so has part: feature:3954991-3955307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3983609-3983893:-1:exon

position:3983609:-1
position: 3983609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3967773-3967971:-1:exon

position:3967773:-1
position: 3967773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3967971:-1
position: 3967971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3955674-3955847:-1:exon

position:3955674:-1
position: 3955674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3955847:-1
position: 3955847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3954991-3955307:-1:exon

position:3955307:-1
position: 3955307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mrpl46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: mrpl46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L46, mitochondrial
translation: MAAALRRLPALGVSVSGVSVSVSAGRGVSVSAGPAARALLQPEGSRGPGPAVAGSGWQLCGAVCLQRAAVVSRQRNGMESAFTRLLEQMELEKSLYADHELRVFEAEERIRRRQANNYDSDEEEDAGQDIVTSQDLEDMWEQKLRQFKPAARVQEADKRNDRSTLNRRLDEKLLLLVKEKVGDEEIWLLPQSYWTPGETMRQTAERTLSTLAGNELQAVFMGNAPTGVYKYKYPRAIQTSSNVGTKVFFFKALLINGDLKTRKKEDHVWVTKSELKDYLKPNYLKQVNRFIFDSSTIYV
SIO_010081: mrpl46
subclass of: SO_0000673
so part of: mrpl46
location: complement(join(3955045..3955307,3955674..3955847,3967773..3967971,3983609..3983872))
location: region:3955045-3983872:-1
so has part: feature:3983609-3983872:-1:exon
so has part: feature:3967773-3967971:-1:exon
so has part: feature:3955674-3955847:-1:exon
so has part: feature:3955045-3955307:-1:exon

XP_032905983.1
type: Protein
SIO_000068: ncbiprotein

position:3955045:-1
position: 3955045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3983872:-1
position: 3983872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3983609-3983872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3967773-3967971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3955674-3955847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3955045-3955307:-1:exon

mrps11
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: mrps11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3984325..4015486
location: region:3984325-4015486:1
so has part: feature:3984325-4015486:1:exon
subclass of: SO_0000010

116991482
type: Gene
SIO_000068: ncbigene

position:3984325:1
position: 3984325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4015486:1
position: 4015486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3984325-4015486:1:exon

mrps11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: mrps11
product: mitochondrial ribosomal protein S11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033050111.1
SIO_010081: mrps11
subclass of: SO_0000673
so part of: mrps11
location: join(3984325..3984452,3989986..3990114,3992765..3992863,3996041..3996170,4004212..4004277,4014833..4015486)
location: region:3984325-4015486:1
so has part: feature:3984325-3984452:1:exon
so has part: feature:3989986-3990114:1:exon
so has part: feature:3992765-3992863:1:exon
so has part: feature:3996041-3996170:1:exon
so has part: feature:4004212-4004277:1:exon
so has part: feature:4014833-4015486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3984325-3984452:1:exon

position:3984452:1
position: 3984452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3989986-3990114:1:exon

position:3989986:1
position: 3989986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3990114:1
position: 3990114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3992765-3992863:1:exon

position:3992765:1
position: 3992765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3992863:1
position: 3992863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3996041-3996170:1:exon

position:3996041:1
position: 3996041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3996170:1
position: 3996170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4004212-4004277:1:exon

position:4004212:1
position: 4004212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4004277:1
position: 4004277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4014833-4015486:1:exon

position:4014833:1
position: 4014833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mrps11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: mrps11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S11, mitochondrial
translation: MQAVAVAMTVRRRLLLLWGRGFNLSLGLSPSAAGRSHVSSMESQCRLIQTSLQKHQEPTEKERPSTEPAQSRQSEDFSILPPMPGQESSLRWEGKKYEDLHIVHVKATYNNTHIQVTNHDGLSMVRTSCGTEGFKNTKKGTPIAAQTAAISAAAKAINRGITFVRVMVKGLGPGRMSAIKGLSMGGLQVVSITDNTPIPHNGCRPRKARRM
SIO_010081: mrps11
subclass of: SO_0000673
so part of: mrps11
location: join(3984349..3984452,3989986..3990114,3992765..3992863,3996041..3996170,4004212..4004277,4014833..4014940)
location: region:3984349-4014940:1
so has part: feature:3984349-3984452:1:exon
so has part: feature:3989986-3990114:1:exon
so has part: feature:3992765-3992863:1:exon
so has part: feature:3996041-3996170:1:exon
so has part: feature:4004212-4004277:1:exon
so has part: feature:4014833-4014940:1:exon

XP_032906002.1
type: Protein
SIO_000068: ncbiprotein

position:3984349:1
position: 3984349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4014940:1
position: 4014940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3984349-3984452:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3989986-3990114:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3992765-3992863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3996041-3996170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4004212-4004277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4014833-4014940:1:exon

det1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: det1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4030196..4048687)
location: region:4030196-4048687:-1
so has part: feature:4030196-4048687:-1:exon
subclass of: SO_0000010

116991767
type: Gene
SIO_000068: ncbigene

position:4030196:-1
position: 4030196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4048687:-1
position: 4048687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4030196-4048687:-1:exon

det1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: det1
product: DET1 partner of COP1 E3 ubiquitin ligase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033050699.1
SIO_010081: det1
subclass of: SO_0000673
so part of: det1
location: complement(join(4030196..4031652,4035960..4036151,4036914..4037104,4044765..4045881,4048546..4048687))
location: region:4030196-4048687:-1
so has part: feature:4048546-4048687:-1:exon
so has part: feature:4044765-4045881:-1:exon
so has part: feature:4036914-4037104:-1:exon
so has part: feature:4035960-4036151:-1:exon
so has part: feature:4030196-4031652:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4048546-4048687:-1:exon

position:4048546:-1
position: 4048546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4044765-4045881:-1:exon

position:4044765:-1
position: 4044765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4045881:-1
position: 4045881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4036914-4037104:-1:exon

position:4036914:-1
position: 4036914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4037104:-1
position: 4037104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4035960-4036151:-1:exon

position:4035960:-1
position: 4035960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4036151:-1
position: 4036151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4030196-4031652:-1:exon

position:4031652:-1
position: 4031652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

det1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: det1
product: DET1 partner of COP1 E3 ubiquitin ligase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033050700.1
SIO_010081: det1
subclass of: SO_0000673
so part of: det1
location: complement(join(4030196..4031652,4035960..4036151,4036914..4037104,4044765..4045881,4046998..4047012))
location: region:4030196-4047012:-1
so has part: feature:4046998-4047012:-1:exon
so has part: feature:4044765-4045881:-1:exon
so has part: feature:4036914-4037104:-1:exon
so has part: feature:4035960-4036151:-1:exon
so has part: feature:4030196-4031652:-1:exon

position:4047012:-1
position: 4047012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4046998-4047012:-1:exon

position:4046998:-1
position: 4046998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4044765-4045881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4036914-4037104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4035960-4036151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4030196-4031652:-1:exon

det1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: det1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DET1 homolog
translation: MDDDDPTIKPRRIENQNVVYRLERRRMHSGRPGAHWYMVRCLHQNVFPNFTVVNVEKPPCFLRKFSPDGRYFIAFSLDQTSLEIYEYQGCQAAEDLLQGHDGEIMLNGSGDLQSVNVRGKLFERFFVLLHVTSVASNGEHLNRECSLFTDDCRYVIVGSAAYLPEEPHPLFFEVYRNNESVTPNPRSPLEDYSLHIIDLHTGSLCDTRSFKCDKIILSHNQGLYLYKNILAVLSVQHQTIHVFQVTPEGTFIDVRTIGRFCYEDDLLTISAVYPEVQGDAQNATSRPFKEKTLNSLKHRLLVYLWQRAEHDGSAAAKRRFFQYFDQLQQLRMWKMQLLDENHLLIKYTSEDVVTLRVTDPSQPSFFVVYNMVTTRVLAVFENTCDELLQLFENFCDLYRNATLHSEAVQFPCSASSNNFARQIQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERPKTCGDHPIRFYARDSGLLKFKIQAGLLGRPVNHTVRRLVAFTFHPFEPFAISVQRTNAEYVVSFHMRHTCV
SIO_010081: det1
subclass of: SO_0000673
so part of: det1
location: complement(join(4031463..4031652,4035960..4036151,4036914..4037104,4044765..4045850))
location: region:4031463-4045850:-1
so has part: feature:4044765-4045850:-1:exon
so has part: feature:4036914-4037104:-1:exon
so has part: feature:4035960-4036151:-1:exon
so has part: feature:4031463-4031652:-1:exon

XP_032906590.1
type: Protein
SIO_000068: ncbiprotein

position:4031463:-1
position: 4031463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4045850:-1
position: 4045850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4044765-4045850:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4036914-4037104:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4035960-4036151:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4031463-4031652:-1:exon

det1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: det1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DET1 homolog
translation: MDDDDPTIKPRRIENQNVVYRLERRRMHSGRPGAHWYMVRCLHQNVFPNFTVVNVEKPPCFLRKFSPDGRYFIAFSLDQTSLEIYEYQGCQAAEDLLQGHDGEIMLNGSGDLQSVNVRGKLFERFFVLLHVTSVASNGEHLNRECSLFTDDCRYVIVGSAAYLPEEPHPLFFEVYRNNESVTPNPRSPLEDYSLHIIDLHTGSLCDTRSFKCDKIILSHNQGLYLYKNILAVLSVQHQTIHVFQVTPEGTFIDVRTIGRFCYEDDLLTISAVYPEVQGDAQNATSRPFKEKTLNSLKHRLLVYLWQRAEHDGSAAAKRRFFQYFDQLQQLRMWKMQLLDENHLLIKYTSEDVVTLRVTDPSQPSFFVVYNMVTTRVLAVFENTCDELLQLFENFCDLYRNATLHSEAVQFPCSASSNNFARQIQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERPKTCGDHPIRFYARDSGLLKFKIQAGLLGRPVNHTVRRLVAFTFHPFEPFAISVQRTNAEYVVSFHMRHTCV
SIO_010081: det1
subclass of: SO_0000673
so part of: det1
location: complement(join(4031463..4031652,4035960..4036151,4036914..4037104,4044765..4045850))
location: region:4031463-4045850:-1
so has part: feature:4044765-4045850:-1:exon
so has part: feature:4036914-4037104:-1:exon
so has part: feature:4035960-4036151:-1:exon
so has part: feature:4031463-4031652:-1:exon

XP_032906591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4044765-4045850:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4036914-4037104:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4035960-4036151:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4031463-4031652:-1:exon

kif7
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: kif7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4195229..4246662
location: region:4195229-4246662:1
so has part: feature:4195229-4246662:1:exon
subclass of: SO_0000010

116991719
type: Gene
SIO_000068: ncbigene

position:4195229:1
position: 4195229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4246662:1
position: 4246662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4195229-4246662:1:exon

kif7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kif7
product: kinesin family member 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033050596.1
SIO_010081: kif7
subclass of: SO_0000673
so part of: kif7
location: join(4195229..4195343,4197296..4197700,4206020..4206220,4207932..4208854,4209695..4209835,4215561..4215785,4218084..4218274,4219924..4220051,4223600..4223794,4225026..4225228,4226324..4226521,4228839..4228964,4232466..4232642,4233331..4233546,4237429..4237635,4238176..4238374,4242880..4243044,4246083..4246662)
location: region:4195229-4246662:1
so has part: feature:4195229-4195343:1:exon
so has part: feature:4197296-4197700:1:exon
so has part: feature:4206020-4206220:1:exon
so has part: feature:4207932-4208854:1:exon
so has part: feature:4209695-4209835:1:exon
so has part: feature:4215561-4215785:1:exon
so has part: feature:4218084-4218274:1:exon
so has part: feature:4219924-4220051:1:exon
so has part: feature:4223600-4223794:1:exon
so has part: feature:4225026-4225228:1:exon
so has part: feature:4226324-4226521:1:exon
so has part: feature:4228839-4228964:1:exon
so has part: feature:4232466-4232642:1:exon
so has part: feature:4233331-4233546:1:exon
so has part: feature:4237429-4237635:1:exon
so has part: feature:4238176-4238374:1:exon
so has part: feature:4242880-4243044:1:exon
so has part: feature:4246083-4246662:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4195229-4195343:1:exon

position:4195343:1
position: 4195343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4197296-4197700:1:exon

position:4197296:1
position: 4197296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4197700:1
position: 4197700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4206020-4206220:1:exon

position:4206020:1
position: 4206020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4206220:1
position: 4206220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4207932-4208854:1:exon

position:4207932:1
position: 4207932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4208854:1
position: 4208854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4209695-4209835:1:exon

position:4209695:1
position: 4209695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4209835:1
position: 4209835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4215561-4215785:1:exon

position:4215561:1
position: 4215561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4215785:1
position: 4215785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4218084-4218274:1:exon

position:4218084:1
position: 4218084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4218274:1
position: 4218274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4219924-4220051:1:exon

position:4219924:1
position: 4219924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4220051:1
position: 4220051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4223600-4223794:1:exon

position:4223600:1
position: 4223600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4223794:1
position: 4223794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4225026-4225228:1:exon

position:4225026:1
position: 4225026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4225228:1
position: 4225228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4226324-4226521:1:exon

position:4226324:1
position: 4226324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4226521:1
position: 4226521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4228839-4228964:1:exon

position:4228839:1
position: 4228839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4228964:1
position: 4228964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4232466-4232642:1:exon

position:4232466:1
position: 4232466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4232642:1
position: 4232642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4233331-4233546:1:exon

position:4233331:1
position: 4233331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4233546:1
position: 4233546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4237429-4237635:1:exon

position:4237429:1
position: 4237429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4237635:1
position: 4237635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4238176-4238374:1:exon

position:4238176:1
position: 4238176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4238374:1
position: 4238374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4242880-4243044:1:exon

position:4242880:1
position: 4242880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4243044:1
position: 4243044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4246083-4246662:1:exon

position:4246083:1
position: 4246083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

kif7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kif7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF7
translation: MCFRRRQGPPCVCLSRPRPGVRPLPADTPTSPALQLNIVRDLVVRRVHHLKGQLWAADMPPKSSGSTKTEESAVKVAVRVRQLLPKELLHRHRSCVHVDLDTQQLTLGHNRHFHFDVIFDQNSTQEDVYTSCVEPLVTAFFAGFNATVFAYGQTGSGKTYTIGGSYISSVIEEDQGIIPRALAEIFKLIDENDAVDHTVKVSYLEVYKEEFKDLLEVETASKDIRTREDDKGNTVLCGVKECDVEGLDEALSLLEIGNSAKHTGATQVNLYSSRSHTIFTVTMEQRRGVGRVTRLAAAAGDRLNSAQVISSKFHFVDLAGSERIIKTGNTGERLKESIQINSGLLALGNVITVLGDPKRKGSHVPYRDSKITRILKDSLGGNAKTVMITCIGPSSLNFDENLNSLNYAKRAQNIKNQVVINCKKEVDRNSELDLQIRTLHGALKHGQREASAKSFPLSAAEGVARLQAESSHYRTCTDAAHRIFMELQVDRNLTVDQVLKMKEWLTIVEDTRSELSTASALDSGIECTSIDESKAQNVSMAQGKTEFGNKSKEQKQLVPKLQAQVQRLEEENRDFLAALEDAMERFKQQNETLLDQEDQIVALQSRLKLVEESQTVDELLESLHLADLSCRPHTAPANNAHPGRSNATHYNRLLSIQAGQISNKTGASSLECSGVGFCDRSHCLQRNLPGEYSVPHRYIAEDLSESTVSPSDEEPEDAELCRSKGKSRRQINLTWTKRDVPRMSSMVNSRGSLVQQQHSDSSSPPGEILKSPHGMGDHNEAHCLSFSNEFRESSPVSRPKLENSEWRLVQAQHKMRELAINIRMKEELIKELVKTGRDAQVMNKQYSRKIRELEQEAEQERAELREAQRQLRDLEEKGPRDLMERTKLQEYHKKVVAAQSKVQALSQKKRDTERLVSLSSQSERRIHEMERNVQLMKQQQALLQNKLKEEMHQKRRFETEMHRGKHRVQELEIKHEQQQKILKIKTEEIAAFQRKRRSGSNGSVISLEEQQKIEEQKRWLDMEIEKVLEQRKALDDLEEELNKRETIVEKKEALLQEKNGLESKRLRSSQALSNDIVRVSSRIESLEKELSEKNGQLRDGSANDQQEVRHEISNLRHEKDQMMKQRTELDEKLRMGNLLSAEEERILFQLDEAIEALDAAIEYKNETITRRQRVLRASASMLSQCEMNLMAKLSYLSASETRALLCKYFDKVVTLREEEHKVQLAFMELEMRADEQQKLIYWLEAALERQRLETDRCLTLQQKEHERNLQVLLQHCQGQVDEGFAGRQKQYEGCIQMLDKELAWYKQANHELNLKLKDLSTYLLNHPAEQSKRLGAVSRTQPAIDRVLPAVGGEVNGNSIPSDQSFARSVAPEQTTRLKEELRDLVHVPLPPTWRRPSLPTEEQTGLEELDHLCNRVVQPAEGAMHWSITAGQKPQKAPRHTNLNASISYFNPGIIDVRKNPVG
SIO_010081: kif7
subclass of: SO_0000673
so part of: kif7
location: join(4195247..4195343,4197296..4197700,4206020..4206220,4207932..4208854,4209695..4209835,4215561..4215785,4218084..4218274,4219924..4220051,4223600..4223794,4225026..4225228,4226324..4226521,4228839..4228964,4232466..4232642,4233331..4233546,4237429..4237635,4238176..4238374,4242880..4243044,4246083..4246480)
location: region:4195247-4246480:1
so has part: feature:4195247-4195343:1:exon
so has part: feature:4197296-4197700:1:exon
so has part: feature:4206020-4206220:1:exon
so has part: feature:4207932-4208854:1:exon
so has part: feature:4209695-4209835:1:exon
so has part: feature:4215561-4215785:1:exon
so has part: feature:4218084-4218274:1:exon
so has part: feature:4219924-4220051:1:exon
so has part: feature:4223600-4223794:1:exon
so has part: feature:4225026-4225228:1:exon
so has part: feature:4226324-4226521:1:exon
so has part: feature:4228839-4228964:1:exon
so has part: feature:4232466-4232642:1:exon
so has part: feature:4233331-4233546:1:exon
so has part: feature:4237429-4237635:1:exon
so has part: feature:4238176-4238374:1:exon
so has part: feature:4242880-4243044:1:exon
so has part: feature:4246083-4246480:1:exon

XP_032906487.1
type: Protein
SIO_000068: ncbiprotein

position:4195247:1
position: 4195247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4246480:1
position: 4246480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4195247-4195343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4197296-4197700:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4206020-4206220:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4207932-4208854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4209695-4209835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4215561-4215785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4218084-4218274:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4219924-4220051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4223600-4223794:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4225026-4225228:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4226324-4226521:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4228839-4228964:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4232466-4232642:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4233331-4233546:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4237429-4237635:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4238176-4238374:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4242880-4243044:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4246083-4246480:1:exon

LOC116991584
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4265370..4270011)
location: region:4265370-4270011:-1
so has part: feature:4265370-4270011:-1:exon
subclass of: SO_0000010

116991584
type: Gene
SIO_000068: ncbigene

position:4265370:-1
position: 4265370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4270011:-1
position: 4270011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4265370-4270011:-1:exon

LOC116991584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991584
product: UDP-glucuronosyltransferase 2C1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033050298.1
SIO_010081: LOC116991584
subclass of: SO_0000673
so part of: LOC116991584
location: complement(join(4265370..4267250,4268874..4268984))
location: region:4265370-4268984:-1
so has part: feature:4268874-4268984:-1:exon
so has part: feature:4265370-4267250:-1:exon

position:4268984:-1
position: 4268984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4268874-4268984:-1:exon

position:4268874:-1
position: 4268874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4265370-4267250:-1:exon

position:4267250:-1
position: 4267250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116991584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991584
product: UDP-glucuronosyltransferase 2C1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033050299.1
SIO_010081: LOC116991584
subclass of: SO_0000673
so part of: LOC116991584
location: complement(join(4265371..4267250,4269157..4269158,4270007..4270011))
location: region:4265371-4270011:-1
so has part: feature:4270007-4270011:-1:exon
so has part: feature:4269157-4269158:-1:exon
so has part: feature:4265371-4267250:-1:exon

position:4265371:-1
position: 4265371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4270007-4270011:-1:exon

position:4270007:-1
position: 4270007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4269157-4269158:-1:exon

position:4269157:-1
position: 4269157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4269158:-1
position: 4269158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4265371-4267250:-1:exon

LOC116991584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGGSGWKSRILVFFVLGTIITLYCPINQAANILVVPIAGSHWINMRILIEELKLHGHNITVLYQAGAWHITERPDLYKSIVIQVQGTTEKIDAGGIMLQNTLLVAQRGWAFWGKVKSQFEALTYFQNRYKTIYRFIADIFENKGLLNQLEEANFDLVLTDPFFGTGPMLAYYLKLPLVYNVRWLDSGEAHSLFAPSPPSYVPISSSQLTDKMSFLQRTQNVVQSLIQLFALELVIYPNYNEICHRYLGPDTDFKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFVQSSGKHGLVVMSLGTFVHSLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLLFDQFDNVVRLESRGAAKVINIATMHSTDLLQALNEVINAASYGDNMKRLSVLHRDQPESPMERAVFWVEYVARHKGAGHLRSESHRLSWYAYYCVDVMIFLLSVLLLLTVLVVGTVKILCRIVCSKKQKTE
SIO_010081: LOC116991584
subclass of: SO_0000673
so part of: LOC116991584
location: complement(4265621..4267225)
location: region:4265621-4267225:-1
so has part: feature:4265621-4267225:-1:exon

XP_032906189.1
type: Protein
SIO_000068: ncbiprotein

position:4265621:-1
position: 4265621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4267225:-1
position: 4267225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4265621-4267225:-1:exon

LOC116991584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGGSGWKSRILVFFVLGTIITLYCPINQAANILVVPIAGSHWINMRILIEELKLHGHNITVLYQAGAWHITERPDLYKSIVIQVQGTTEKIDAGGIMLQNTLLVAQRGWAFWGKVKSQFEALTYFQNRYKTIYRFIADIFENKGLLNQLEEANFDLVLTDPFFGTGPMLAYYLKLPLVYNVRWLDSGEAHSLFAPSPPSYVPISSSQLTDKMSFLQRTQNVVQSLIQLFALELVIYPNYNEICHRYLGPDTDFKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFVQSSGKHGLVVMSLGTFVHSLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLLFDQFDNVVRLESRGAAKVINIATMHSTDLLQALNEVINAASYGDNMKRLSVLHRDQPESPMERAVFWVEYVARHKGAGHLRSESHRLSWYAYYCVDVMIFLLSVLLLLTVLVVGTVKILCRIVCSKKQKTE
SIO_010081: LOC116991584
subclass of: SO_0000673
so part of: LOC116991584
location: complement(4265621..4267225)
location: region:4265621-4267225:-1
so has part: feature:4265621-4267225:-1:exon

XP_032906190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4265621-4267225:-1:exon

LOC116991545
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4290032..4294760)
location: region:4290032-4294760:-1
so has part: feature:4290032-4294760:-1:exon
subclass of: SO_0000010

116991545
type: Gene
SIO_000068: ncbigene

position:4290032:-1
position: 4290032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4294760:-1
position: 4294760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4290032-4294760:-1:exon

LOC116991545
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991545
product: UDP-glucuronosyltransferase 2C1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 102 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033050229.1
SIO_010081: LOC116991545
subclass of: SO_0000673
so part of: LOC116991545
location: complement(join(4290032..4292165,4294614..4294760))
location: region:4290032-4294760:-1
so has part: feature:4294614-4294760:-1:exon
so has part: feature:4290032-4292165:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4294614-4294760:-1:exon

position:4294614:-1
position: 4294614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4290032-4292165:-1:exon

position:4292165:-1
position: 4292165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116991545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGGSGWKSRILVFFVLGTIITLYCPINQAANILVVPIAGSHWINMRILIEELKLHGHNITVLYKAGAWHITERPDLYKSIVIQVQGTTAKIDVVEIILNNTLRIAQNGWTFRGILEFQFEMFAFMQSCHKIMNDYITATFENKTLLNQLKEANFDLMLTDPLFADGPMLEYYLKLPLVYNVRLLDSGDAHFLFAPSPPSYVPISSSHFTDKMSFLQRTQNAVQSLIHYSILELFIFRYYNDLCNRYLGPDTDIKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFVQSSGKHGLVVMSLGTFVHSLPMEITMKIAKALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLIFDQFDNVVRLESRGAAKVINVATMHSTDLLQALNEVINDASYGDNMKRLTALHRDQPESPMERAVFWIEYVARHKGAGHLRSESHRLPWYAYHCVDVMIFLLSVLLLLIVLVVGTLKKLCHVVCGKKQKTE
SIO_010081: LOC116991545
subclass of: SO_0000673
so part of: LOC116991545
location: complement(4290539..4292143)
location: region:4290539-4292143:-1
so has part: feature:4290539-4292143:-1:exon

XP_032906120.1
type: Protein
SIO_000068: ncbiprotein

position:4290539:-1
position: 4290539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4292143:-1
position: 4292143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4290539-4292143:-1:exon

LOC116991460
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991460
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4302446..4311558)
location: region:4302446-4311558:-1
so has part: feature:4302446-4311558:-1:exon

116991460
type: Gene
SIO_000068: ncbigene

position:4302446:-1
position: 4302446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4311558:-1
position: 4311558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4302446-4311558:-1:exon

LOC116991460
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991460
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 63% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116991460
subclass of: SO_0000673
so part of: LOC116991460
location: complement(4302446..4302822)
location: region:4302446-4302822:-1
so has part: feature:4302446-4302822:-1:exon

position:4302822:-1
position: 4302822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4302446-4302822:-1:exon

LOC116991460
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991460
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 63% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116991460
subclass of: SO_0000673
so part of: LOC116991460
location: complement(4302974..4303065)
location: region:4302974-4303065:-1
so has part: feature:4302974-4303065:-1:exon

position:4302974:-1
position: 4302974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4303065:-1
position: 4303065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4302974-4303065:-1:exon

LOC116991460
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991460
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 63% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116991460
subclass of: SO_0000673
so part of: LOC116991460
location: complement(4303281..4303371)
location: region:4303281-4303371:-1
so has part: feature:4303281-4303371:-1:exon

position:4303281:-1
position: 4303281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4303371:-1
position: 4303371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4303281-4303371:-1:exon

LOC116991460
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991460
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 63% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116991460
subclass of: SO_0000673
so part of: LOC116991460
location: complement(4309632..4309881)
location: region:4309632-4309881:-1
so has part: feature:4309632-4309881:-1:exon

position:4309632:-1
position: 4309632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4309881:-1
position: 4309881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4309632-4309881:-1:exon

LOC116991460
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991460
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 63% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116991460
subclass of: SO_0000673
so part of: LOC116991460
location: complement(4310853..4311558)
location: region:4310853-4311558:-1
so has part: feature:4310853-4311558:-1:exon

position:4310853:-1
position: 4310853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4310853-4311558:-1:exon

LOC116991583
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4348467..4354386)
location: region:4348467-4354386:-1
so has part: feature:4348467-4354386:-1:exon
subclass of: SO_0000010

116991583
type: Gene
SIO_000068: ncbigene

position:4348467:-1
position: 4348467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4354386:-1
position: 4354386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4348467-4354386:-1:exon

LOC116991583
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991583
product: UDP-glucuronosyltransferase 2C1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 106 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033050297.1
SIO_010081: LOC116991583
subclass of: SO_0000673
so part of: LOC116991583
location: complement(join(4348467..4350106,4354263..4354386))
location: region:4348467-4354386:-1
so has part: feature:4354263-4354386:-1:exon
so has part: feature:4348467-4350106:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4354263-4354386:-1:exon

position:4354263:-1
position: 4354263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4348467-4350106:-1:exon

position:4350106:-1
position: 4350106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116991583
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGGLGWKNKSKVTFVLGIIFALSCPITEAARILVVPVDGSHWINMKILMEELNLRGHNMTVLCYSANWYIKERPDLYQTIIVQAQENIEAPSRKEVMERIVLMSLDRLQNGHTLWGNIMLQNLMVMFLYKFHRLHQNFNIAIFENKTLLNQFENANFDLILTDPLFGTGPMLAYYLKVPLVYNVRWQMTGEAHFLTAPSPLSYIPFPGSLLTDKMDFLQRTENVIHSLFQHLISEFLIHPLHNEICHRYLGPDTDIKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFVQSSGKHGLVVMSLGTFVHSLPMEIIMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLLFDQFDNVVRLESRGAAKVINVATTHSTDLLQALNEVINGTYYGDNMKRLSALHRDQPESPMERAVFWVEYVDRHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLMKLCRIVCRKKQKTE
SIO_010081: LOC116991583
subclass of: SO_0000673
so part of: LOC116991583
location: complement(4348467..4350080)
location: region:4348467-4350080:-1
so has part: feature:4348467-4350080:-1:exon

XP_032906188.1
type: Protein
SIO_000068: ncbiprotein

position:4350080:-1
position: 4350080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4348467-4350080:-1:exon

LOC116991461
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991461
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4391876..4397798)
location: region:4391876-4397798:-1
so has part: feature:4391876-4397798:-1:exon

116991461
type: Gene
SIO_000068: ncbigene

position:4391876:-1
position: 4391876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4397798:-1
position: 4397798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4391876-4397798:-1:exon

LOC116991461
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991461
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116991461
subclass of: SO_0000673
so part of: LOC116991461
location: complement(4391876..4393489)
location: region:4391876-4393489:-1
so has part: feature:4391876-4393489:-1:exon

position:4393489:-1
position: 4393489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4391876-4393489:-1:exon

LOC116991462
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4393936..4402184)
location: region:4393936-4402184:-1
so has part: feature:4393936-4402184:-1:exon

116991462
type: Gene
SIO_000068: ncbigene

position:4393936:-1
position: 4393936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4402184:-1
position: 4402184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4393936-4402184:-1:exon

LOC116991462
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991462
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116991462
subclass of: SO_0000673
so part of: LOC116991462
location: complement(4393936..4394073)
location: region:4393936-4394073:-1
so has part: feature:4393936-4394073:-1:exon

position:4394073:-1
position: 4394073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4393936-4394073:-1:exon

LOC116991461
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991461
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116991461
subclass of: SO_0000673
so part of: LOC116991461
location: complement(4397576..4397798)
location: region:4397576-4397798:-1
so has part: feature:4397576-4397798:-1:exon

position:4397576:-1
position: 4397576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4397576-4397798:-1:exon

LOC116991462
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991462
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116991462
subclass of: SO_0000673
so part of: LOC116991462
location: complement(4397576..4397729)
location: region:4397576-4397729:-1
so has part: feature:4397576-4397729:-1:exon

position:4397729:-1
position: 4397729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4397576-4397729:-1:exon

LOC116991462
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991462
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116991462
subclass of: SO_0000673
so part of: LOC116991462
location: complement(4400690..4402184)
location: region:4400690-4402184:-1
so has part: feature:4400690-4402184:-1:exon

position:4400690:-1
position: 4400690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4400690-4402184:-1:exon

LOC116991629
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991629
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4405417..4413494
location: region:4405417-4413494:1
so has part: feature:4405417-4413494:1:exon
subclass of: SO_0000011

116991629
type: Gene
SIO_000068: ncbigene

position:4405417:1
position: 4405417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4413494:1
position: 4413494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4405417-4413494:1:exon

LOC116991629
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991629
product: uncharacterized LOC116991629
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416844.1
SIO_010081: LOC116991629
subclass of: SO_0000673
so part of: LOC116991629
location: join(4405417..4405427,4406248..4406253,4409151..4409154,4413387..4413494)
location: region:4405417-4413494:1
so has part: feature:4405417-4405427:1:exon
so has part: feature:4406248-4406253:1:exon
so has part: feature:4409151-4409154:1:exon
so has part: feature:4413387-4413494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4405417-4405427:1:exon

position:4405427:1
position: 4405427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4406248-4406253:1:exon

position:4406248:1
position: 4406248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4406253:1
position: 4406253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4409151-4409154:1:exon

position:4409151:1
position: 4409151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4409154:1
position: 4409154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4413387-4413494:1:exon

position:4413387:1
position: 4413387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991589
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4416204..4419387
location: region:4416204-4419387:1
so has part: feature:4416204-4419387:1:exon
subclass of: SO_0000010

116991589
type: Gene
SIO_000068: ncbigene

position:4416204:1
position: 4416204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4419387:1
position: 4419387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4416204-4419387:1:exon

LOC116991589
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991589
product: UDP-glucuronosyltransferase 2C1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033050308.1
SIO_010081: LOC116991589
subclass of: SO_0000673
so part of: LOC116991589
location: join(4416204..4416556,4417726..4419387)
location: region:4416204-4419387:1
so has part: feature:4416204-4416556:1:exon
so has part: feature:4417726-4419387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4416204-4416556:1:exon

position:4416556:1
position: 4416556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4417726-4419387:1:exon

position:4417726:1
position: 4417726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991589
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGNPGWKGRFAFVLCVTITLSCPIIRAARILVVPVDGSHWINMKCLIEELNLRGHNITVLSQSTSLYIKENPDLYQSIMIQMPRESENYNLLENIVQITLENLQKGSTVWGKIHLQYEMLMFMFEYHQWVKEIIKALFENNSLLNQLGNANFELILTDPAFGLGSMLAYYLKLPLVYNVRWQVGGEGHLLTAPSPPSYIPRTGSHLTDKMNILQRSQNVLQTLNELLIVEFLIHPLYNEICQQYLGPDTDFKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFVQSSGKHGLVVMSMGTMVNSLPMEITMKIAEALSQILQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLFFDQFDNVVRLESRGAAKVINVATMHSTDLLQTLNEVINGESYGDNMKRLSALHRDQPESPMERAVFWVEYVARHKGAGHLRSESHRLPWYAYYCADVMIFLLSVLLLLTVLVVGTLKKLCRSVCSKKQKTE
SIO_010081: LOC116991589
subclass of: SO_0000673
so part of: LOC116991589
location: 4417752..4419350
location: region:4417752-4419350:1
so has part: feature:4417752-4419350:1:exon

XP_032906199.1
type: Protein
SIO_000068: ncbiprotein

position:4417752:1
position: 4417752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4419350:1
position: 4419350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4417752-4419350:1:exon

LOC116991463
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4431257..4432355
location: region:4431257-4432355:1
so has part: feature:4431257-4432355:1:exon
subclass of: SO_0000010

116991463
type: Gene
SIO_000068: ncbigene

position:4431257:1
position: 4431257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4432355:1
position: 4432355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4431257-4432355:1:exon

LOC116991463
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991463
product: UDP-glucuronosyltransferase 2A3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033050094.1
SIO_010081: LOC116991463
subclass of: SO_0000673
so part of: LOC116991463
location: 4431257..4432355
location: region:4431257-4432355:1
so has part: feature:4431257-4432355:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4431257-4432355:1:exon

LOC116991463
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2A3-like
translation: MRVDFVFEFPRPTMPNIVYIGGFQCKPARSLAAEFEEFVQSSGKHGLVVMSLGTFVHSLPMEITMKIAEVLSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLAHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLLFDQFDNLIRLESRGAAKVINFATMHSTDLLQALNEVINGASYGDNMKRLSALHRDQPESPMERAVFWVVYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLKETLSYCSEEKTKNSLRFIL
SIO_010081: LOC116991463
subclass of: SO_0000673
so part of: LOC116991463
location: 4431543..4432355
location: region:4431543-4432355:1
so has part: feature:4431543-4432355:1:exon

XP_032905985.1
type: Protein
SIO_000068: ncbiprotein

position:4431543:1
position: 4431543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4431543-4432355:1:exon

LOC116991625
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4464956..4465312
location: region:4464956-4465312:1
so has part: feature:4464956-4465312:1:exon
subclass of: SO_0000011

116991625
type: Gene
SIO_000068: ncbigene

position:4464956:1
position: 4464956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4465312:1
position: 4465312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4464956-4465312:1:exon

LOC116991625
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991625
product: uncharacterized LOC116991625
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XR_004416843.1
SIO_010081: LOC116991625
subclass of: SO_0000673
so part of: LOC116991625
location: join(4464956..4465105,4465138..4465312)
location: region:4464956-4465312:1
so has part: feature:4464956-4465105:1:exon
so has part: feature:4465138-4465312:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4464956-4465105:1:exon

position:4465105:1
position: 4465105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4465138-4465312:1:exon

position:4465138:1
position: 4465138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991609
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4480225..4481883
location: region:4480225-4481883:1
so has part: feature:4480225-4481883:1:exon

116991609
type: Gene
SIO_000068: ncbigene

position:4480225:1
position: 4480225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4481883:1
position: 4481883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4480225-4481883:1:exon

LOC116991609
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991609
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116991609
subclass of: SO_0000673
so part of: LOC116991609
location: 4480225..4481883
location: region:4480225-4481883:1
so has part: feature:4480225-4481883:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4480225-4481883:1:exon

LOC116991464
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991464
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4490469..>4493782
location: region:4490469-4493782:1
so has part: feature:4490469-4493782:1:exon
subclass of: SO_0000010

116991464
type: Gene
SIO_000068: ncbigene

position:4490469:1
position: 4490469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4493782:1
position: 4493782
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4490469-4493782:1:exon

LOC116991464
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991464
product: UDP-glucuronosyltransferase 2A2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033050095.1
SIO_010081: LOC116991464
subclass of: SO_0000673
so part of: LOC116991464
location: join(4490469..4490659,4492587..>4493782)
location: region:4490469-4493782:1
so has part: feature:4490469-4490659:1:exon
so has part: feature:4492587-4493782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4490469-4490659:1:exon

position:4490659:1
position: 4490659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4492587-4493782:1:exon

position:4492587:1
position: 4492587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991464
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991464
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2A2-like
translation: MGGLGWRSRSNVIFILGIIFALSCPITQAAGILVVPVDGSHWINMKILMEELNLRGHNMIVLCHSATWYIKERPDLYQTIIVQAQENIEATSRKEVMETFVLMSLDRLQNSHTLWGNIMLQNLMVTFMYNVHRIYQHFNMAIFENKTLLNQFENANFDLILTDPIFGTGLMLAYYLKVPLVYNVRWLINGEAHFLTAPSPLSYVPLPGSLLTDKMDFLQRTENVIYSLFQHLISEFLVYPLYNEICHRYLGPDTDIKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFVQSSGKHGLVVMSLGSVVDSLLMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHHNTRAFVSPGGTNGI
SIO_010081: LOC116991464
subclass of: SO_0000673
so part of: LOC116991464
location: 4492613..>4493782
location: region:4492613-4493782:1
so has part: feature:4492613-4493782:1:exon

XP_032905986.1
type: Protein
SIO_000068: ncbiprotein

position:4492613:1
position: 4492613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4492613-4493782:1:exon

LOC116991466
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4500702..4502535)
location: region:4500702-4502535:-1
so has part: feature:4500702-4502535:-1:exon
subclass of: SO_0000010

116991466
type: Gene
SIO_000068: ncbigene

position:4500702:-1
position: 4500702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4502535:-1
position: 4502535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4500702-4502535:-1:exon

LOC116991466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991466
product: UDP-glucuronosyltransferase 2C1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 122 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033050096.1
SIO_010081: LOC116991466
subclass of: SO_0000673
so part of: LOC116991466
location: complement(4500702..4502535)
location: region:4500702-4502535:-1
so has part: feature:4500702-4502535:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4500702-4502535:-1:exon

LOC116991466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGGLAWKSRSKVAFVLGIIFALFCPITQAARILVVPVDGSHWINMKILMEELNLRGHNITVLCYSATWYIKERPDLYQTIIVQAQDQFVAPSRKEMMEEVVLMSLDRLQNSHTLWGNIMFQNLMITIMYNFHRLHQNFNMAIFENKTLLNQFENANFDLILTDPIFGAGPMLAYYLKVPLVYNIRWQIHGEAHFLTAPSPLSYVPLPGSLLTDKMDFLQRTENVIYSLFQHLISEFYMYPLYNEICHRYLGPDTDIKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFVQSSGKHGLVVMSLGTFVHSLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLLFDQFDNLLKLESRGAAKVINVATMHSTDLLQTLNEVINGASYGDTMKRLSALHRDQPESPMERAVFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLKKLCRIALKKKQKIH
SIO_010081: LOC116991466
subclass of: SO_0000673
so part of: LOC116991466
location: complement(4500922..4502535)
location: region:4500922-4502535:-1
so has part: feature:4500922-4502535:-1:exon

XP_032905987.1
type: Protein
SIO_000068: ncbiprotein

position:4500922:-1
position: 4500922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4500922-4502535:-1:exon

LOC116991456
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991456
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4510158..4511447)
location: region:4510158-4511447:-1
so has part: feature:4510158-4511447:-1:exon

116991456
type: Gene
SIO_000068: ncbigene

position:4510158:-1
position: 4510158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4511447:-1
position: 4511447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4510158-4511447:-1:exon

LOC116991456
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991456
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116991456
subclass of: SO_0000673
so part of: LOC116991456
location: complement(4510158..4511447)
location: region:4510158-4511447:-1
so has part: feature:4510158-4511447:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4510158-4511447:-1:exon

LOC116991457
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991457
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4548135..4549893)
location: region:4548135-4549893:-1
so has part: feature:4548135-4549893:-1:exon
subclass of: SO_0000010

116991457
type: Gene
SIO_000068: ncbigene

position:4548135:-1
position: 4548135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4549893:-1
position: 4549893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4548135-4549893:-1:exon

LOC116991457
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991457
product: UDP-glucuronosyltransferase 2A2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033050090.1
SIO_010081: LOC116991457
subclass of: SO_0000673
so part of: LOC116991457
location: complement(4548135..4549893)
location: region:4548135-4549893:-1
so has part: feature:4548135-4549893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4548135-4549893:-1:exon

LOC116991457
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991457
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: UDP-glucuronosyltransferase 2A2-like
translation: MKILMEELNLHGHNMTVLCYSANWYIKERPDLYQTIIVQAQENIVASSRKEAMEKIVLMSLGRLQNGHTLLGNIMLQNLIITFMYNFHRIYQNFNIAIFENRTLLKQFENANFDLILTDPLFGTGSMLAYYLKVPLVYNARWQISGEAHFLTAPSPLSYVPLQGSLLTDKMDFLQRTENVVHSLFQHLISEFLVYPLYNEICHRYLGPDTDIVXILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARFLAAEFEEFAQSSGKHGLVVMSLGSIVDCLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLLFDQFDNLIRLESRGAAKVINIATMHTTDLLQALNEVINGASYGDNMKRFSALHRDQPASPMERAVFWVEYVARHKGAGHLRSESRRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLKKLCRIARKKKQKIH
SIO_010081: LOC116991457
subclass of: SO_0000673
so part of: LOC116991457
location: complement(4548312..4549791)
location: region:4548312-4549791:-1
so has part: feature:4548312-4549791:-1:exon

XP_032905981.1
type: Protein
SIO_000068: ncbiprotein

position:4548312:-1
position: 4548312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4549791:-1
position: 4549791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4548312-4549791:-1:exon

LOC116991467
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4561476..4564319
location: region:4561476-4564319:1
so has part: feature:4561476-4564319:1:exon

116991467
type: Gene
SIO_000068: ncbigene

position:4561476:1
position: 4561476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4564319:1
position: 4564319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4561476-4564319:1:exon

LOC116991467
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116991467
subclass of: SO_0000673
so part of: LOC116991467
location: 4561476..4562167
location: region:4561476-4562167:1
so has part: feature:4561476-4562167:1:exon

position:4562167:1
position: 4562167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4561476-4562167:1:exon

LOC116991467
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116991467
subclass of: SO_0000673
so part of: LOC116991467
location: 4563771..4564319
location: region:4563771-4564319:1
so has part: feature:4563771-4564319:1:exon

position:4563771:1
position: 4563771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4563771-4564319:1:exon

LOC116991585
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4571522..4573390
location: region:4571522-4573390:1
so has part: feature:4571522-4573390:1:exon
subclass of: SO_0000010

116991585
type: Gene
SIO_000068: ncbigene

position:4571522:1
position: 4571522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4573390:1
position: 4573390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4571522-4573390:1:exon

LOC116991585
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991585
product: UDP-glucuronosyltransferase 2C1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 113 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033050300.1
SIO_010081: LOC116991585
subclass of: SO_0000673
so part of: LOC116991585
location: 4571522..4573390
location: region:4571522-4573390:1
so has part: feature:4571522-4573390:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4571522-4573390:1:exon

LOC116991585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGGLGWKSRSKVTFVLGIIFALSCPITQAARILVVPVDGSHWINMKILMEELNLRGHNMTVLCYSENWYIKERPDLYQTIIVQAQDKVVAPSRKKAMEEVVLMSLDRLQNSHTLWGNIMFQNLMITIMYNFHRLHQNFNMAIFENKTLLNQFENANFDLILTDPIFGTGPMLAYYLKVPLVYNIRWQINGEAHFLTAPSPLSYVPLPGSLLTDKMDFLQRTENVIYSLFQHLISEFFMYPLYNEICHRYLGPDTDIKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFAQSSGKHGLVVMSLGSIVDSLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLLFDQFDNLLKLESRGAAKVINVATMHSTDLLQTLNEVINGAYYGDNMKRLSALHRDQPESPMERAVFWVEYVVRHKGAGHLRSESHQLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLKKLCRIALKKKQKIH
SIO_010081: LOC116991585
subclass of: SO_0000673
so part of: LOC116991585
location: 4571544..4573157
location: region:4571544-4573157:1
so has part: feature:4571544-4573157:1:exon

XP_032906191.1
type: Protein
SIO_000068: ncbiprotein

position:4571544:1
position: 4571544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4573157:1
position: 4573157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4571544-4573157:1:exon

LOC116991571
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4591426..4595350)
location: region:4591426-4595350:-1
so has part: feature:4591426-4595350:-1:exon
subclass of: SO_0000010

116991571
type: Gene
SIO_000068: ncbigene

position:4591426:-1
position: 4591426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4595350:-1
position: 4595350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4591426-4595350:-1:exon

LOC116991571
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991571
product: UDP-glucuronosyltransferase 2C1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 123 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033050275.1
SIO_010081: LOC116991571
subclass of: SO_0000673
so part of: LOC116991571
location: complement(join(4591426..4593117,4595274..4595350))
location: region:4591426-4595350:-1
so has part: feature:4595274-4595350:-1:exon
so has part: feature:4591426-4593117:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4595274-4595350:-1:exon

position:4595274:-1
position: 4595274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4591426-4593117:-1:exon

position:4593117:-1
position: 4593117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116991571
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991571
product: UDP-glucuronosyltransferase 2C1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 123 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033050274.1
SIO_010081: LOC116991571
subclass of: SO_0000673
so part of: LOC116991571
location: complement(join(4591426..4593117,4595045..4595252))
location: region:4591426-4595252:-1
so has part: feature:4595045-4595252:-1:exon
so has part: feature:4591426-4593117:-1:exon

position:4595252:-1
position: 4595252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4595045-4595252:-1:exon

position:4595045:-1
position: 4595045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4591426-4593117:-1:exon

LOC116991571
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGGLGWKSRSNVIFILGIIFALSCPITQAARILVVPVDGSHWINMKILMEELNLRGHNITVLCHYATWYIKESPDLYQTIIVQAQENIEALSRKEVMETFVLMSLDRLQNSHTLWGNIMLQNLMVTFMYNVHRIYQHFNRAIFENKTLLNQFENANFDLILTDPIFGTGPMLAYYLKVPLVYNVRWQINGEAHFLIAPSPLSYVPLPGSLLTDKMDFLQRTENVIYSLFQHLISEFLVYPLYNEICHRYLGPDTDIKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARSLAAEFEEFVQSSGKHGLVVMSLGSVVDSLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLFFDQFDNLFKVEYRGAAKVINIATMHSTDLLQALNEVINGASYGDNMKRLSALHRDQPESPMERAVFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLKKLCRIVCSKKQKTE
SIO_010081: LOC116991571
subclass of: SO_0000673
so part of: LOC116991571
location: complement(4591478..4593091)
location: region:4591478-4593091:-1
so has part: feature:4591478-4593091:-1:exon

XP_032906165.1
type: Protein
SIO_000068: ncbiprotein

position:4591478:-1
position: 4591478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4593091:-1
position: 4593091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4591478-4593091:-1:exon

LOC116991571
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGGLGWKSRSNVIFILGIIFALSCPITQAARILVVPVDGSHWINMKILMEELNLRGHNITVLCHYATWYIKESPDLYQTIIVQAQENIEALSRKEVMETFVLMSLDRLQNSHTLWGNIMLQNLMVTFMYNVHRIYQHFNRAIFENKTLLNQFENANFDLILTDPIFGTGPMLAYYLKVPLVYNVRWQINGEAHFLIAPSPLSYVPLPGSLLTDKMDFLQRTENVIYSLFQHLISEFLVYPLYNEICHRYLGPDTDIKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARSLAAEFEEFVQSSGKHGLVVMSLGSVVDSLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLFFDQFDNLFKVEYRGAAKVINIATMHSTDLLQALNEVINGASYGDNMKRLSALHRDQPESPMERAVFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLKKLCRIVCSKKQKTE
SIO_010081: LOC116991571
subclass of: SO_0000673
so part of: LOC116991571
location: complement(4591478..4593091)
location: region:4591478-4593091:-1
so has part: feature:4591478-4593091:-1:exon

XP_032906166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4591478-4593091:-1:exon

LOC116991752
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4598625..4602578)
location: region:4598625-4602578:-1
so has part: feature:4598625-4602578:-1:exon
subclass of: SO_0000010

116991752
type: Gene
SIO_000068: ncbigene

position:4598625:-1
position: 4598625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4602578:-1
position: 4602578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4598625-4602578:-1:exon

LOC116991752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991752
product: UDP-glucuronosyltransferase 2C1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 123 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033050671.1
SIO_010081: LOC116991752
subclass of: SO_0000673
so part of: LOC116991752
location: complement(join(4598625..4600336,4602493..4602578))
location: region:4598625-4602578:-1
so has part: feature:4602493-4602578:-1:exon
so has part: feature:4598625-4600336:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4602493-4602578:-1:exon

position:4602493:-1
position: 4602493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4598625-4600336:-1:exon

position:4600336:-1
position: 4600336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116991752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991752
product: UDP-glucuronosyltransferase 2C1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 123 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033050670.1
SIO_010081: LOC116991752
subclass of: SO_0000673
so part of: LOC116991752
location: complement(join(4598627..4600336,4602264..4602496))
location: region:4598627-4602496:-1
so has part: feature:4602264-4602496:-1:exon
so has part: feature:4598627-4600336:-1:exon

position:4598627:-1
position: 4598627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4602496:-1
position: 4602496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4602264-4602496:-1:exon

position:4602264:-1
position: 4602264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4598627-4600336:-1:exon

LOC116991752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGGLGWKSRSNVIFILGIIFALSCPITQAARILVVPVDGSHWINMKILMEELNLRGHNITVLCHSATWYIKESPDLYQTIIVQAQENIEALSRKEVMETFVLMSLDRLQNSHTLWGNIMLQNLMVTFMYNVHRIYQHFNMAIFENKTLLNQFENANFDLILTDPIFGTGPMLAYYLKVPLVYNVRWQISGEAHFLTAPSPLSYVPLQGSLLTDKMDFFQRTENVIHSLFQHFSSEFLIHPLYNEICHRYLGPDTDIKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFVQSSGKHGLVVMSLGSIVNSLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLSKWIPQNDLLGHPNTRTFVSHGGTNGIYEAIYHGVPVVGMPLLFDQFDNLLKLETRGAAKVINIATMHSTDLLQALNEVINGASYGDNMKRLSALHRDQPESPMERAVFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLKKLCRIVCRKKQKTE
SIO_010081: LOC116991752
subclass of: SO_0000673
so part of: LOC116991752
location: complement(4598697..4600310)
location: region:4598697-4600310:-1
so has part: feature:4598697-4600310:-1:exon

XP_032906561.1
type: Protein
SIO_000068: ncbiprotein

position:4598697:-1
position: 4598697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4600310:-1
position: 4600310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4598697-4600310:-1:exon

LOC116991752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGGLGWKSRSNVIFILGIIFALSCPITQAARILVVPVDGSHWINMKILMEELNLRGHNITVLCHSATWYIKESPDLYQTIIVQAQENIEALSRKEVMETFVLMSLDRLQNSHTLWGNIMLQNLMVTFMYNVHRIYQHFNMAIFENKTLLNQFENANFDLILTDPIFGTGPMLAYYLKVPLVYNVRWQISGEAHFLTAPSPLSYVPLQGSLLTDKMDFFQRTENVIHSLFQHFSSEFLIHPLYNEICHRYLGPDTDIKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFVQSSGKHGLVVMSLGSIVNSLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLSKWIPQNDLLGHPNTRTFVSHGGTNGIYEAIYHGVPVVGMPLLFDQFDNLLKLETRGAAKVINIATMHSTDLLQALNEVINGASYGDNMKRLSALHRDQPESPMERAVFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLKKLCRIVCRKKQKTE
SIO_010081: LOC116991752
subclass of: SO_0000673
so part of: LOC116991752
location: complement(4598697..4600310)
location: region:4598697-4600310:-1
so has part: feature:4598697-4600310:-1:exon

XP_032906562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4598697-4600310:-1:exon

LOC116991753
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4605849..4620865)
location: region:4605849-4620865:-1
so has part: feature:4605849-4620865:-1:exon
subclass of: SO_0000010

116991753
type: Gene
SIO_000068: ncbigene

position:4605849:-1
position: 4605849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4620865:-1
position: 4620865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4605849-4620865:-1:exon

LOC116991753
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991753
product: UDP-glucuronosyltransferase 2C1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 135 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033050674.1
SIO_010081: LOC116991753
subclass of: SO_0000673
so part of: LOC116991753
location: complement(join(4605849..4607556,4610517..4610541))
location: region:4605849-4610541:-1
so has part: feature:4610517-4610541:-1:exon
so has part: feature:4605849-4607556:-1:exon

position:4610541:-1
position: 4610541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4610517-4610541:-1:exon

position:4610517:-1
position: 4610517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4605849-4607556:-1:exon

position:4607556:-1
position: 4607556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116991753
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991753
product: UDP-glucuronosyltransferase 2C1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 135 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033050673.1
SIO_010081: LOC116991753
subclass of: SO_0000673
so part of: LOC116991753
location: complement(join(4605851..4607556,4620533..4620865))
location: region:4605851-4620865:-1
so has part: feature:4620533-4620865:-1:exon
so has part: feature:4605851-4607556:-1:exon

position:4605851:-1
position: 4605851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4620533-4620865:-1:exon

position:4620533:-1
position: 4620533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4605851-4607556:-1:exon

LOC116991753
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGGLGWRSRLNVIFILGIIFALSCPITQAARILVVPVDGSHWINMKILMEELNLRGHNMTVLCYSANWYIKERPDLYQTIIVQAQENTEAPSRKEAMEKIVQMSLDGLQNSHTLWGRIMLQNLMVTFMYNFHRIYQNFNMAIFENKTLLNQFEKANFDLILTDPIFGTGPMLAYYLKVPLVYNIRWQISGEAHFLTAPSPLSYVPLQGSLLTDKMDFFQRTENVIHSLFQHFSSEFLIHPLYNEICHRYLGPDTDIKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFVQSSGKHGLVVMSLGSIVNSLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLSKWIPQNDLLGHPNTRTFVSHGGTNGIYEAIYHGVPVVGMPLLFDQFDNLLKLETRGAAKVINIATMHSTDLLQALNEVINGASYGDNMKRLSALHRDQPESPMERAVFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLKKLCRIVCRKKQKTE
SIO_010081: LOC116991753
subclass of: SO_0000673
so part of: LOC116991753
location: complement(4605917..4607530)
location: region:4605917-4607530:-1
so has part: feature:4605917-4607530:-1:exon

XP_032906564.1
type: Protein
SIO_000068: ncbiprotein

position:4605917:-1
position: 4605917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4607530:-1
position: 4607530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4605917-4607530:-1:exon

LOC116991753
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGGLGWRSRLNVIFILGIIFALSCPITQAARILVVPVDGSHWINMKILMEELNLRGHNMTVLCYSANWYIKERPDLYQTIIVQAQENTEAPSRKEAMEKIVQMSLDGLQNSHTLWGRIMLQNLMVTFMYNFHRIYQNFNMAIFENKTLLNQFEKANFDLILTDPIFGTGPMLAYYLKVPLVYNIRWQISGEAHFLTAPSPLSYVPLQGSLLTDKMDFFQRTENVIHSLFQHFSSEFLIHPLYNEICHRYLGPDTDIKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFVQSSGKHGLVVMSLGSIVNSLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLSKWIPQNDLLGHPNTRTFVSHGGTNGIYEAIYHGVPVVGMPLLFDQFDNLLKLETRGAAKVINIATMHSTDLLQALNEVINGASYGDNMKRLSALHRDQPESPMERAVFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLKKLCRIVCRKKQKTE
SIO_010081: LOC116991753
subclass of: SO_0000673
so part of: LOC116991753
location: complement(4605917..4607530)
location: region:4605917-4607530:-1
so has part: feature:4605917-4607530:-1:exon

XP_032906565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4605917-4607530:-1:exon

LOC116991755
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4632833..4645442
location: region:4632833-4645442:1
so has part: feature:4632833-4645442:1:exon
subclass of: SO_0000011

116991755
type: Gene
SIO_000068: ncbigene

position:4632833:1
position: 4632833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4645442:1
position: 4645442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4632833-4645442:1:exon

LOC116991755
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991755
product: uncharacterized LOC116991755
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004416891.1
SIO_010081: LOC116991755
subclass of: SO_0000673
so part of: LOC116991755
location: join(4632833..4632847,4641275..4641276,4645393..4645442)
location: region:4632833-4645442:1
so has part: feature:4632833-4632847:1:exon
so has part: feature:4641275-4641276:1:exon
so has part: feature:4645393-4645442:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4632833-4632847:1:exon

position:4632847:1
position: 4632847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4641275-4641276:1:exon

position:4641275:1
position: 4641275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4641276:1
position: 4641276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4645393-4645442:1:exon

position:4645393:1
position: 4645393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991751
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4644991..4693035)
location: region:4644991-4693035:-1
so has part: feature:4644991-4693035:-1:exon
subclass of: SO_0000010

116991751
type: Gene
SIO_000068: ncbigene

position:4644991:-1
position: 4644991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4693035:-1
position: 4693035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4644991-4693035:-1:exon

LOC116991751
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991751
product: UDP-glucuronosyltransferase 2C1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 131 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033050669.1
SIO_010081: LOC116991751
subclass of: SO_0000673
so part of: LOC116991751
location: complement(join(4644991..4647060,4692942..4693035))
location: region:4644991-4693035:-1
so has part: feature:4692942-4693035:-1:exon
so has part: feature:4644991-4647060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4692942-4693035:-1:exon

position:4692942:-1
position: 4692942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4644991-4647060:-1:exon

position:4647060:-1
position: 4647060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116991751
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991751
product: UDP-glucuronosyltransferase 2C1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 131 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033050668.1
SIO_010081: LOC116991751
subclass of: SO_0000673
so part of: LOC116991751
location: complement(join(4644991..4647060,4657695..4657826))
location: region:4644991-4657826:-1
so has part: feature:4657695-4657826:-1:exon
so has part: feature:4644991-4647060:-1:exon

position:4657826:-1
position: 4657826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4657695-4657826:-1:exon

position:4657695:-1
position: 4657695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4644991-4647060:-1:exon

LOC116991751
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991751
product: UDP-glucuronosyltransferase 2C1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 131 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033050667.1
SIO_010081: LOC116991751
subclass of: SO_0000673
so part of: LOC116991751
location: complement(join(4644991..4647060,4649944..4650060,4657695..4657714))
location: region:4644991-4657714:-1
so has part: feature:4657695-4657714:-1:exon
so has part: feature:4649944-4650060:-1:exon
so has part: feature:4644991-4647060:-1:exon

position:4657714:-1
position: 4657714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4657695-4657714:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4649944-4650060:-1:exon

position:4649944:-1
position: 4649944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4650060:-1
position: 4650060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4644991-4647060:-1:exon

LOC116991751
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGGLGWKIRSKVTFVLGIIFALSCPITQAARILVVPVDGSHWINMKILMEELNLRGHNMTVLCYSANWYIKERPDLYQTIIVQAQENIEAPSRKEVMEKFVQMSLDRLQNNHTLWGNIMLQIRMFMFKYNFHRLYQNFNMAIFENKTLLNQFENANFDLILTDPLFGTGPMLAYYLKVPLVYNIRWQMTGEAHFLTAPSPLSYVPLPGSLLTDKMDFLQRTENVIYSLFQHLISEFLMCPLYNEICHRYLGPDMDIKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFAQSSGKHGLVVMSLGSVVDSLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLLFDQFDNLIRLESRGAAKVINIATMHSTDLLQTFNEVINGTSYGDNMKRLSALHRDQPESPMERAIFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTVKKLCRIVCRKKQKIH
SIO_010081: LOC116991751
subclass of: SO_0000673
so part of: LOC116991751
location: complement(4645421..4647034)
location: region:4645421-4647034:-1
so has part: feature:4645421-4647034:-1:exon

XP_032906558.1
type: Protein
SIO_000068: ncbiprotein

position:4645421:-1
position: 4645421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4647034:-1
position: 4647034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4645421-4647034:-1:exon

LOC116991751
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGGLGWKIRSKVTFVLGIIFALSCPITQAARILVVPVDGSHWINMKILMEELNLRGHNMTVLCYSANWYIKERPDLYQTIIVQAQENIEAPSRKEVMEKFVQMSLDRLQNNHTLWGNIMLQIRMFMFKYNFHRLYQNFNMAIFENKTLLNQFENANFDLILTDPLFGTGPMLAYYLKVPLVYNIRWQMTGEAHFLTAPSPLSYVPLPGSLLTDKMDFLQRTENVIYSLFQHLISEFLMCPLYNEICHRYLGPDMDIKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFAQSSGKHGLVVMSLGSVVDSLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLLFDQFDNLIRLESRGAAKVINIATMHSTDLLQTFNEVINGTSYGDNMKRLSALHRDQPESPMERAIFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTVKKLCRIVCRKKQKIH
SIO_010081: LOC116991751
subclass of: SO_0000673
so part of: LOC116991751
location: complement(4645421..4647034)
location: region:4645421-4647034:-1
so has part: feature:4645421-4647034:-1:exon

XP_032906559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4645421-4647034:-1:exon

LOC116991751
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGGLGWKIRSKVTFVLGIIFALSCPITQAARILVVPVDGSHWINMKILMEELNLRGHNMTVLCYSANWYIKERPDLYQTIIVQAQENIEAPSRKEVMEKFVQMSLDRLQNNHTLWGNIMLQIRMFMFKYNFHRLYQNFNMAIFENKTLLNQFENANFDLILTDPLFGTGPMLAYYLKVPLVYNIRWQMTGEAHFLTAPSPLSYVPLPGSLLTDKMDFLQRTENVIYSLFQHLISEFLMCPLYNEICHRYLGPDMDIKSILLRADVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFAQSSGKHGLVVMSLGSVVDSLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLLFDQFDNLIRLESRGAAKVINIATMHSTDLLQTFNEVINGTSYGDNMKRLSALHRDQPESPMERAIFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTVKKLCRIVCRKKQKIH
SIO_010081: LOC116991751
subclass of: SO_0000673
so part of: LOC116991751
location: complement(4645421..4647034)
location: region:4645421-4647034:-1
so has part: feature:4645421-4647034:-1:exon

XP_032906560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4645421-4647034:-1:exon

LOC116991754
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991754
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4657859..4678235
location: region:4657859-4678235:1
so has part: feature:4657859-4678235:1:exon
subclass of: SO_0000011

116991754
type: Gene
SIO_000068: ncbigene

position:4657859:1
position: 4657859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4678235:1
position: 4678235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4657859-4678235:1:exon

LOC116991754
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991754
product: uncharacterized LOC116991754, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004416890.1
SIO_010081: LOC116991754
subclass of: SO_0000673
so part of: LOC116991754
location: join(4657859..4657961,4665204..4665393,4678107..4678235)
location: region:4657859-4678235:1
so has part: feature:4657859-4657961:1:exon
so has part: feature:4665204-4665393:1:exon
so has part: feature:4678107-4678235:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4657859-4657961:1:exon

position:4657961:1
position: 4657961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4665204-4665393:1:exon

position:4665204:1
position: 4665204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4665393:1
position: 4665393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4678107-4678235:1:exon

position:4678107:1
position: 4678107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991754
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991754
product: uncharacterized LOC116991754, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004416889.1
SIO_010081: LOC116991754
subclass of: SO_0000673
so part of: LOC116991754
location: join(4665015..4665041,4665204..4665393,4678107..4678235)
location: region:4665015-4678235:1
so has part: feature:4665015-4665041:1:exon
so has part: feature:4665204-4665393:1:exon
so has part: feature:4678107-4678235:1:exon

position:4665015:1
position: 4665015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4665015-4665041:1:exon

position:4665041:1
position: 4665041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4665204-4665393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4678107-4678235:1:exon

LOC116991750
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4677804..4693257)
location: region:4677804-4693257:-1
so has part: feature:4677804-4693257:-1:exon
subclass of: SO_0000010

116991750
type: Gene
SIO_000068: ncbigene

position:4677804:-1
position: 4677804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4693257:-1
position: 4693257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4677804-4693257:-1:exon

LOC116991750
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991750
product: UDP-glucuronosyltransferase 2A2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 129 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033050665.1
SIO_010081: LOC116991750
subclass of: SO_0000673
so part of: LOC116991750
location: complement(join(4677804..4679719,4692942..4693257))
location: region:4677804-4693257:-1
so has part: feature:4692942-4693257:-1:exon
so has part: feature:4677804-4679719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4692942-4693257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4677804-4679719:-1:exon

position:4679719:-1
position: 4679719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116991750
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991750
product: UDP-glucuronosyltransferase 2A2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 129 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033050666.1
SIO_010081: LOC116991750
subclass of: SO_0000673
so part of: LOC116991750
location: complement(join(4677804..4679719,4693140..4693245))
location: region:4677804-4693245:-1
so has part: feature:4693140-4693245:-1:exon
so has part: feature:4677804-4679719:-1:exon

position:4693245:-1
position: 4693245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4693140-4693245:-1:exon

position:4693140:-1
position: 4693140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4677804-4679719:-1:exon

LOC116991750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2A2-like
translation: MGGLGWKSRSNVTFVLGIIFALSCPITQAARILVVPVDGSHWINMKLLMEELNLRGHNMTVLCYSTTWFIKERLDLYQTIIVQAQDNFVAPSRKEMMEKFVLMSLDRLQNSHTLWGRIMLQYVMGTFLYDFHSLYQNFNTAIFENKTLLNQFKNANFDLILTDPLFGIGSMLAYYLKVPLVYNVRWQISGEAHFLTAPSPLSYVPFPGSFLTDKMDFFQRTENVIHSLFQHLISEFVVYPRYNELCHRYLGPDTDIKSILLRADVWLVRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFVQSSGKHGLVVMSLGSIVDSLPMEITMKIAEALSQVPQKVIWRYDGETPPNIGYNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVVGMPLLFDQFDNLLKLESRGAAKVINIATMHSTDLLQALNEVINGTSYGDNMKRLSALHRDQTESPMERAVFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLKKLCRIALKKKQKIH
SIO_010081: LOC116991750
subclass of: SO_0000673
so part of: LOC116991750
location: complement(4678080..4679693)
location: region:4678080-4679693:-1
so has part: feature:4678080-4679693:-1:exon

XP_032906556.1
type: Protein
SIO_000068: ncbiprotein

position:4678080:-1
position: 4678080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4679693:-1
position: 4679693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4678080-4679693:-1:exon

LOC116991750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2A2-like
translation: MGGLGWKSRSNVTFVLGIIFALSCPITQAARILVVPVDGSHWINMKLLMEELNLRGHNMTVLCYSTTWFIKERLDLYQTIIVQAQDNFVAPSRKEMMEKFVLMSLDRLQNSHTLWGRIMLQYVMGTFLYDFHSLYQNFNTAIFENKTLLNQFKNANFDLILTDPLFGIGSMLAYYLKVPLVYNVRWQISGEAHFLTAPSPLSYVPFPGSFLTDKMDFFQRTENVIHSLFQHLISEFVVYPRYNELCHRYLGPDTDIKSILLRADVWLVRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFVQSSGKHGLVVMSLGSIVDSLPMEITMKIAEALSQVPQKVIWRYDGETPPNIGYNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVVGMPLLFDQFDNLLKLESRGAAKVINIATMHSTDLLQALNEVINGTSYGDNMKRLSALHRDQTESPMERAVFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLKKLCRIALKKKQKIH
SIO_010081: LOC116991750
subclass of: SO_0000673
so part of: LOC116991750
location: complement(4678080..4679693)
location: region:4678080-4679693:-1
so has part: feature:4678080-4679693:-1:exon

XP_032906557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4678080-4679693:-1:exon

LOC116991516
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4698425..4711311)
location: region:4698425-4711311:-1
so has part: feature:4698425-4711311:-1:exon
subclass of: SO_0000011

116991516
type: Gene
SIO_000068: ncbigene

position:4698425:-1
position: 4698425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4711311:-1
position: 4711311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4698425-4711311:-1:exon

LOC116991516
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991516
product: uncharacterized LOC116991516
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416810.1
SIO_010081: LOC116991516
subclass of: SO_0000673
so part of: LOC116991516
location: complement(join(4698425..4698578,4710101..4710104,4711301..4711311))
location: region:4698425-4711311:-1
so has part: feature:4711301-4711311:-1:exon
so has part: feature:4710101-4710104:-1:exon
so has part: feature:4698425-4698578:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4711301-4711311:-1:exon

position:4711301:-1
position: 4711301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4710101-4710104:-1:exon

position:4710101:-1
position: 4710101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4710104:-1
position: 4710104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4698425-4698578:-1:exon

position:4698578:-1
position: 4698578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116991454
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4723902..4741462)
location: region:4723902-4741462:-1
so has part: feature:4723902-4741462:-1:exon
subclass of: SO_0000010

116991454
type: Gene
SIO_000068: ncbigene

position:4723902:-1
position: 4723902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4741462:-1
position: 4741462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4723902-4741462:-1:exon

LOC116991454
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991454
product: UDP-glucuronosyltransferase 2C1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 76 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033050088.1
SIO_010081: LOC116991454
subclass of: SO_0000673
so part of: LOC116991454
location: complement(join(4723902..4725647,4741294..4741462))
location: region:4723902-4741462:-1
so has part: feature:4741294-4741462:-1:exon
so has part: feature:4723902-4725647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4741294-4741462:-1:exon

position:4741294:-1
position: 4741294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4723902-4725647:-1:exon

position:4725647:-1
position: 4725647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116991454
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991454
product: UDP-glucuronosyltransferase 2C1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 76 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033050089.1
SIO_010081: LOC116991454
subclass of: SO_0000673
so part of: LOC116991454
location: complement(join(4723902..4725647,4728153..4728320))
location: region:4723902-4728320:-1
so has part: feature:4728153-4728320:-1:exon
so has part: feature:4723902-4725647:-1:exon

position:4728320:-1
position: 4728320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4728153-4728320:-1:exon

position:4728153:-1
position: 4728153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4723902-4725647:-1:exon

LOC116991454
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGNPGWKGRFAFVLCVTITLSCPITRAARILVVPVDGSHWINMKCLIEELNLHGHSITVLSQSTSLYIKESPDLYQSIMIQMPREYENYNVMENIVQKTLDNLQEGSTVWGKINLQYEMLMFLFEYHQWAKEIIKALFENNSLLNQLENANFELILTDPVFGLGSMLAYYLKLPLVYNVRWQVGGEGHLLTAPSPPSYIPRTGSHLTDKMNILQRSQNVLQTLNEFLIIELLVYPRYNEICQQYLGPDTDFKSILLRADMWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEAFVQSSGKHGLVVMSMGTMVNSLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLIFDQFDNVVRLESRGAAKVINIATMHSTDLFQALNEVINGASYGDNMKRLSALHRDQPESPMERAVFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLKKLCRIVCGEKQKTE
SIO_010081: LOC116991454
subclass of: SO_0000673
so part of: LOC116991454
location: complement(4724023..4725621)
location: region:4724023-4725621:-1
so has part: feature:4724023-4725621:-1:exon

XP_032905979.1
type: Protein
SIO_000068: ncbiprotein

position:4724023:-1
position: 4724023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4725621:-1
position: 4725621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4724023-4725621:-1:exon

LOC116991454
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MGNPGWKGRFAFVLCVTITLSCPITRAARILVVPVDGSHWINMKCLIEELNLHGHSITVLSQSTSLYIKESPDLYQSIMIQMPREYENYNVMENIVQKTLDNLQEGSTVWGKINLQYEMLMFLFEYHQWAKEIIKALFENNSLLNQLENANFELILTDPVFGLGSMLAYYLKLPLVYNVRWQVGGEGHLLTAPSPPSYIPRTGSHLTDKMNILQRSQNVLQTLNEFLIIELLVYPRYNEICQQYLGPDTDFKSILLRADMWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEAFVQSSGKHGLVVMSMGTMVNSLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVIGMPLIFDQFDNVVRLESRGAAKVINIATMHSTDLFQALNEVINGASYGDNMKRLSALHRDQPESPMERAVFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLKKLCRIVCGEKQKTE
SIO_010081: LOC116991454
subclass of: SO_0000673
so part of: LOC116991454
location: complement(4724023..4725621)
location: region:4724023-4725621:-1
so has part: feature:4724023-4725621:-1:exon

XP_032905980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4724023-4725621:-1:exon

LOC116991453
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991453
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4735236..4741429)
location: region:4735236-4741429:-1
so has part: feature:4735236-4741429:-1:exon
subclass of: SO_0000010

116991453
type: Gene
SIO_000068: ncbigene

position:4735236:-1
position: 4735236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4741429:-1
position: 4741429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4735236-4741429:-1:exon

LOC116991453
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991453
product: UDP-glucuronosyltransferase 2C1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 126 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033050086.1
SIO_010081: LOC116991453
subclass of: SO_0000673
so part of: LOC116991453
location: complement(join(4735236..4737594,4741294..4741429))
location: region:4735236-4741429:-1
so has part: feature:4741294-4741429:-1:exon
so has part: feature:4735236-4737594:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4741294-4741429:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4735236-4737594:-1:exon

position:4737594:-1
position: 4737594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116991453
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991453
product: UDP-glucuronosyltransferase 2C1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 126 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033050087.1
SIO_010081: LOC116991453
subclass of: SO_0000673
so part of: LOC116991453
location: complement(join(4735236..4737594,4740908..4741198))
location: region:4735236-4741198:-1
so has part: feature:4740908-4741198:-1:exon
so has part: feature:4735236-4737594:-1:exon

position:4741198:-1
position: 4741198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4740908-4741198:-1:exon

position:4740908:-1
position: 4740908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4735236-4737594:-1:exon

LOC116991453
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991453
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MKHSNWRSELLAIFVLCAIITLSSPIKILVVPVDGSHWVNMKILVEELNLHGHRITVVHPSTSWYIKEKPDLYQSIVVQMEECLGKNKTEEIIQGYLQKVLTALRYGMTPWAHIQVQYQMWYALYYYHQCAGQIIVAIFKNKVVLNQIEDANFDLVLTDPAFGTGPILASYLKLPVVYNVRWLPSKEAHLLSAPSPLSYIPVTGSHLTDKMTFLERTWNVVLNLNHIIISEFLINPIYNELCHRYLGPNTDFQGILLSSDVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFVQSSGKHGLVVMSMGTIVSFLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVVGIPLLFDQFDNLIRLESRGAAKVINVATMHSTDLLQALNKVINDASYGDNMKRLSALHRDQPESPLERAVFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLKKLCRIALKKKQKIH
SIO_010081: LOC116991453
subclass of: SO_0000673
so part of: LOC116991453
location: complement(4735968..4737569)
location: region:4735968-4737569:-1
so has part: feature:4735968-4737569:-1:exon

XP_032905977.1
type: Protein
SIO_000068: ncbiprotein

position:4735968:-1
position: 4735968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4737569:-1
position: 4737569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4735968-4737569:-1:exon

LOC116991453
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991453
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronosyltransferase 2C1-like
translation: MKHSNWRSELLAIFVLCAIITLSSPIKILVVPVDGSHWVNMKILVEELNLHGHRITVVHPSTSWYIKEKPDLYQSIVVQMEECLGKNKTEEIIQGYLQKVLTALRYGMTPWAHIQVQYQMWYALYYYHQCAGQIIVAIFKNKVVLNQIEDANFDLVLTDPAFGTGPILASYLKLPVVYNVRWLPSKEAHLLSAPSPLSYIPVTGSHLTDKMTFLERTWNVVLNLNHIIISEFLINPIYNELCHRYLGPNTDFQGILLSSDVWLMRVDFVFEFPRPTMPNIVYIGGFQCKPARPLAAEFEEFVQSSGKHGLVVMSMGTIVSFLPMEITMKIAEALSQIPQKVIWRYDGETPPNIGNNTLLAKWIPQNDLLGHPNTRAFVSHGGTNGIYEAIYHGVPVVGIPLLFDQFDNLIRLESRGAAKVINVATMHSTDLLQALNKVINDASYGDNMKRLSALHRDQPESPLERAVFWVEYVARHKGAGHLRSESHRLPWYAYYCVDVMIFLLSVLLLLTVLVVGTLKKLCRIALKKKQKIH
SIO_010081: LOC116991453
subclass of: SO_0000673
so part of: LOC116991453
location: complement(4735968..4737569)
location: region:4735968-4737569:-1
so has part: feature:4735968-4737569:-1:exon

XP_032905978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4735968-4737569:-1:exon

trnar-acg
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trnar-acg
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(4744288..4744360)
location: region:4744288-4744360:-1
so has part: feature:4744288-4744360:-1:exon
subclass of: SO_0000663

116991786
type: Gene
SIO_000068: ncbigene

position:4744288:-1
position: 4744288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4744360:-1
position: 4744360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4744288-4744360:-1:exon

trnar-acg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 386614
gene: trnar-acg
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(4744325..4744327),aa:Arg, seq:acg)
SIO_010081: trnar-acg
subclass of: SO_0000673
so part of: trnar-acg
location: complement(4744288..4744360)
location: region:4744288-4744360:-1
so has part: feature:4744288-4744360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4744288-4744360:-1:exon

fanci
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: fanci
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4745165..4844468
location: region:4745165-4844468:1
so has part: feature:4745165-4844468:1:exon
subclass of: SO_0000010

116991592
type: Gene
SIO_000068: ncbigene

position:4745165:1
position: 4745165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4844468:1
position: 4844468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4745165-4844468:1:exon

fanci
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fanci
product: FA complementation group I, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033050313.1
SIO_010081: fanci
subclass of: SO_0000673
so part of: fanci
location: join(4745165..4745269,4746784..4746909,4747387..4747459,4749740..4749870,4759641..4759794,4759946..4760003,4761725..4761766,4761870..4761993,4762430..4762515,4763819..4763951,4766187..4766279,4769741..4769877,4771250..4771430,4772027..4772114,4773442..4773572,4776240..4776310,4778756..4778870,4780060..4780182,4794248..4794316,4796885..4796986,4799009..4799194,4800880..4801001,4804981..4805142,4808237..4808416,4809175..4809341,4812229..4812308,4812489..4812605,4816041..4816092,4816617..4816744,4820353..4820421,4822478..4822574,4825158..4825342,4827720..4827776,4830819..4830878,4838578..4838664,4840123..4840218,4842773..4842904,4844022..4844468)
location: region:4745165-4844468:1
so has part: feature:4745165-4745269:1:exon
so has part: feature:4746784-4746909:1:exon
so has part: feature:4747387-4747459:1:exon
so has part: feature:4749740-4749870:1:exon
so has part: feature:4759641-4759794:1:exon
so has part: feature:4759946-4760003:1:exon
so has part: feature:4761725-4761766:1:exon
so has part: feature:4761870-4761993:1:exon
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so has part: feature:4804981-4805142:1:exon
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so has part: feature:4840123-4840218:1:exon
so has part: feature:4842773-4842904:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:4745165-4745269:1:exon

position:4745269:1
position: 4745269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4746784-4746909:1:exon

position:4746784:1
position: 4746784
reference: sequence
type: ForwardStrandPosition
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position:4746909:1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:4747387-4747459:1:exon

position:4747387:1
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reference: sequence
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position:4747459:1
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urn:…
SIO_000300: 4
SIO_000628: feature:4749740-4749870:1:exon

position:4749740:1
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:4759641-4759794:1:exon

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reference: sequence
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position:4759794:1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:4759946-4760003:1:exon

position:4759946:1
position: 4759946
reference: sequence
type: ForwardStrandPosition
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position:4760003:1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:4761725-4761766:1:exon

position:4761725:1
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reference: sequence
type: ForwardStrandPosition
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position:4761766:1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:4761870-4761993:1:exon

position:4761870:1
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reference: sequence
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position:4761993:1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:4762430-4762515:1:exon

position:4762430:1
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reference: sequence
type: ForwardStrandPosition
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position:4762515:1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:4763819-4763951:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:4763951:1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:4766187-4766279:1:exon

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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:4769741-4769877:1:exon

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reference: sequence
type: ForwardStrandPosition
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:4771250-4771430:1:exon

position:4771250:1
position: 4771250
reference: sequence
type: ForwardStrandPosition
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position:4771430:1
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urn:…
SIO_000300: 14
SIO_000628: feature:4772027-4772114:1:exon

position:4772027:1
position: 4772027
reference: sequence
type: ForwardStrandPosition
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position:4772114:1
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urn:…
SIO_000300: 15
SIO_000628: feature:4773442-4773572:1:exon

position:4773442:1
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reference: sequence
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position:4773572:1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:4776240-4776310:1:exon

position:4776240:1
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reference: sequence
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position:4776310:1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:4778756-4778870:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:4778870:1
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:4780060-4780182:1:exon

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reference: sequence
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position:4780182:1
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urn:…
SIO_000300: 19
SIO_000628: feature:4794248-4794316:1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:4796885-4796986:1:exon

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reference: sequence
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position:4796986:1
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urn:…
SIO_000300: 21
SIO_000628: feature:4799009-4799194:1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:4800880-4801001:1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:4804981-4805142:1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:4808237-4808416:1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:4809175-4809341:1:exon

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urn:…
SIO_000300: 26
SIO_000628: feature:4812229-4812308:1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:4812489-4812605:1:exon

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reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:4816041-4816092:1:exon

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reference: sequence
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urn:…
SIO_000300: 29
SIO_000628: feature:4816617-4816744:1:exon

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reference: sequence
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urn:…
SIO_000300: 30
SIO_000628: feature:4820353-4820421:1:exon

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reference: sequence
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urn:…
SIO_000300: 31
SIO_000628: feature:4822478-4822574:1:exon

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urn:…
SIO_000300: 32
SIO_000628: feature:4825158-4825342:1:exon

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reference: sequence
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urn:…
SIO_000300: 33
SIO_000628: feature:4827720-4827776:1:exon

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urn:…
SIO_000300: 34
SIO_000628: feature:4830819-4830878:1:exon

position:4830819:1
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reference: sequence
type: ForwardStrandPosition
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position:4830878:1
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reference: sequence
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urn:…
SIO_000300: 35
SIO_000628: feature:4838578-4838664:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:4838664:1
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reference: sequence
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urn:…
SIO_000300: 36
SIO_000628: feature:4840123-4840218:1:exon

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reference: sequence
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position:4840218:1
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reference: sequence
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urn:…
SIO_000300: 37
SIO_000628: feature:4842773-4842904:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:4842904:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 38
SIO_000628: feature:4844022-4844468:1:exon

position:4844022:1
position: 4844022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fanci
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fanci
product: FA complementation group I, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_033050314.1
SIO_010081: fanci
subclass of: SO_0000673
so part of: fanci
location: join(4745167..4745350,4746784..4746909,4747387..4747459,4749740..4749870,4759641..4759794,4759946..4760003,4761725..4761766,4761870..4761993,4762430..4762515,4763819..4763951,4766187..4766279,4769741..4769877,4771250..4771430,4772027..4772114,4773442..4773572,4776240..4776310,4778756..4778870,4780060..4780182,4794248..4794316,4796885..4796986,4799009..4799194,4800880..4801001,4804981..4805142,4808237..4808416,4809175..4809341,4812229..4812308,4812489..4812605,4816041..4816092,4816617..4816744,4820353..4820421,4822478..4822574,4825158..4825342,4827720..4827776,4830819..4830878,4838578..4838664,4840123..4840218,4842773..4842904,4844022..4844468)
location: region:4745167-4844468:1
so has part: feature:4745167-4745350:1:exon
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so has part: feature:4749740-4749870:1:exon
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so has part: feature:4759946-4760003:1:exon
so has part: feature:4761725-4761766:1:exon
so has part: feature:4761870-4761993:1:exon
so has part: feature:4762430-4762515:1:exon
so has part: feature:4763819-4763951:1:exon
so has part: feature:4766187-4766279:1:exon
so has part: feature:4769741-4769877:1:exon
so has part: feature:4771250-4771430:1:exon
so has part: feature:4772027-4772114:1:exon
so has part: feature:4773442-4773572:1:exon
so has part: feature:4776240-4776310:1:exon
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so has part: feature:4796885-4796986:1:exon
so has part: feature:4799009-4799194:1:exon
so has part: feature:4800880-4801001:1:exon
so has part: feature:4804981-4805142:1:exon
so has part: feature:4808237-4808416:1:exon
so has part: feature:4809175-4809341:1:exon
so has part: feature:4812229-4812308:1:exon
so has part: feature:4812489-4812605:1:exon
so has part: feature:4816041-4816092:1:exon
so has part: feature:4816617-4816744:1:exon
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so has part: feature:4830819-4830878:1:exon
so has part: feature:4838578-4838664:1:exon
so has part: feature:4840123-4840218:1:exon
so has part: feature:4842773-4842904:1:exon
so has part: feature:4844022-4844468:1:exon

position:4745167:1
position: 4745167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4745167-4745350:1:exon

position:4745350:1
position: 4745350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4746784-4746909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4747387-4747459:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4749740-4749870:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4759641-4759794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4759946-4760003:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4761725-4761766:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4761870-4761993:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4762430-4762515:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4763819-4763951:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4766187-4766279:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4769741-4769877:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4771250-4771430:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4772027-4772114:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4773442-4773572:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4776240-4776310:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4778756-4778870:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4780060-4780182:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4794248-4794316:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4796885-4796986:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4799009-4799194:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4800880-4801001:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4804981-4805142:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4808237-4808416:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4809175-4809341:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4812229-4812308:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4812489-4812605:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4816041-4816092:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4816617-4816744:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4820353-4820421:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4822478-4822574:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4825158-4825342:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4827720-4827776:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4830819-4830878:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4838578-4838664:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4840123-4840218:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4842773-4842904:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:4844022-4844468:1:exon

fanci
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fanci
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group I protein
translation: MDQKILYLAAGEDTEGLQQCLQQMKENEIGALITTHALKGKEIGMLVRAIFKGSPCSKHEGAACRLFVYKHCMQLVESGDLQSDIATDMIGLLMLEAHHLPGATLAELASLYVDAIKGGSIMNGKSLDLFPTILTVLASQESLSYGGGQLCGEEYKKQLINTLCSSRWDPKCVIHLASMFRDVPVSTEELQFVMMKVLKMFPRLDLQELPPLVYQLLLLSAKGCKKILLEGIIKFFHQQDQLQKEEQMGTESMELEAASVPKDQLRHVEGTIILHIVFAIKLDHDLGRELIKYLKAGQQGDTSLVLCSFSIALLLSVARIHRFEDQVFEFLKTSTIKSFKDRLFQQNSKFLQDLIPAQCSVSEMILETVSNSVFGWDHVTQSLVQLGFIFMDSFGPKGGPFGKVVEINPVAAKTPAQQASRLGAKILLETFKVHEPIRSEILEQVLNRVVTKTSSPISQYLDLLSDIVISAPLILLESSSKVIEAFDHLSYLPLSTVQGLLKAVQPLLKISVSMKDSLILVLRKAMFSSQLDSRKSAVAGFLLLLKNFKLLGSLTYSQCSQTVTASQVQVDVHMRHNASANEALCLEILGSLKRCLSQQSDVRLMLYEGLFDVLRRNSQLANTILQTLLSQLNRYYELEEDLLPPLKLESCITTQGGQIYLQEPLAHLLSCIQNCLAWYKQSLLQGSKGNDDEGEEDNEDSFQRDLEEQLDSITRRMIKSELEDFELDKSADFSLTSNVGIKNSIYAVLVMGVFEVLIEYNFITSNYSTNRFEDVISLFNRYHKLSELLKEKSGKGKSLSSNKTKSLLTFSFVSSLLTALFRDNAQSHEESLSILRSNNEFMRYTVNMALQKIQQLEETGHADGPDGQNIERTFKYLCDITRVLLWRYTSIPSAVEESGKKEKGRTISLLCLEGLLRIFNAMQHRYQNKIQQFFSAIDVTSDGEEEQEIVNITEKAAFHIRQFQRSLVTQLSGDEEDFNSKEAQLLVSILSTLSRLLEPTSEQFAQMLTWTIKICKENNLEDVQFCKGLMNMLFSLYVLRKSPVSLLQELSRDVHSRLGDIDQDIEIEEQSHFAMVNSKTAAPTVVQLILSQVEKVLEEVDWLITKLKAQLSSDRVLTDESSQGSTTREPVEKAIILQLGTLLTTFHELIQTSIPLGGCVDILLKEMGKMYNILTSLVKYYIHGYTTNAAHLPARFEKLVKLSGSHLTPQCYAFITYVQNIQNETMSFAGGAEKKKDKKEMASITAATARVLRETKPVPNLIFAIEQYEKFLIHLTKKSKVNLMQYMKLSTSRDFRINAATLDAALQEQEEGDVQQDGNDDDAQSNTTVDENREPKKKRRKR
SIO_010081: fanci
subclass of: SO_0000673
so part of: fanci
location: join(4746826..4746909,4747387..4747459,4749740..4749870,4759641..4759794,4759946..4760003,4761725..4761766,4761870..4761993,4762430..4762515,4763819..4763951,4766187..4766279,4769741..4769877,4771250..4771430,4772027..4772114,4773442..4773572,4776240..4776310,4778756..4778870,4780060..4780182,4794248..4794316,4796885..4796986,4799009..4799194,4800880..4801001,4804981..4805142,4808237..4808416,4809175..4809341,4812229..4812308,4812489..4812605,4816041..4816092,4816617..4816744,4820353..4820421,4822478..4822574,4825158..4825342,4827720..4827776,4830819..4830878,4838578..4838664,4840123..4840218,4842773..4842904,4844022..4844078)
location: region:4746826-4844078:1
so has part: feature:4746826-4746909:1:exon
so has part: feature:4747387-4747459:1:exon
so has part: feature:4749740-4749870:1:exon
so has part: feature:4759641-4759794:1:exon
so has part: feature:4759946-4760003:1:exon
so has part: feature:4761725-4761766:1:exon
so has part: feature:4761870-4761993:1:exon
so has part: feature:4762430-4762515:1:exon
so has part: feature:4763819-4763951:1:exon
so has part: feature:4766187-4766279:1:exon
so has part: feature:4769741-4769877:1:exon
so has part: feature:4771250-4771430:1:exon
so has part: feature:4772027-4772114:1:exon
so has part: feature:4773442-4773572:1:exon
so has part: feature:4776240-4776310:1:exon
so has part: feature:4778756-4778870:1:exon
so has part: feature:4780060-4780182:1:exon
so has part: feature:4794248-4794316:1:exon
so has part: feature:4796885-4796986:1:exon
so has part: feature:4799009-4799194:1:exon
so has part: feature:4800880-4801001:1:exon
so has part: feature:4804981-4805142:1:exon
so has part: feature:4808237-4808416:1:exon
so has part: feature:4809175-4809341:1:exon
so has part: feature:4812229-4812308:1:exon
so has part: feature:4812489-4812605:1:exon
so has part: feature:4816041-4816092:1:exon
so has part: feature:4816617-4816744:1:exon
so has part: feature:4820353-4820421:1:exon
so has part: feature:4822478-4822574:1:exon
so has part: feature:4825158-4825342:1:exon
so has part: feature:4827720-4827776:1:exon
so has part: feature:4830819-4830878:1:exon
so has part: feature:4838578-4838664:1:exon
so has part: feature:4840123-4840218:1:exon
so has part: feature:4842773-4842904:1:exon
so has part: feature:4844022-4844078:1:exon

XP_032906204.1
type: Protein
SIO_000068: ncbiprotein

position:4746826:1
position: 4746826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4844078:1
position: 4844078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4746826-4746909:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4747387-4747459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4749740-4749870:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4759641-4759794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4759946-4760003:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4761725-4761766:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4761870-4761993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4762430-4762515:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4763819-4763951:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4766187-4766279:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4769741-4769877:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4771250-4771430:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4772027-4772114:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4773442-4773572:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4776240-4776310:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4778756-4778870:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4780060-4780182:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4794248-4794316:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4796885-4796986:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4799009-4799194:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4800880-4801001:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4804981-4805142:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4808237-4808416:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4809175-4809341:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4812229-4812308:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4812489-4812605:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4816041-4816092:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4816617-4816744:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4820353-4820421:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4822478-4822574:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4825158-4825342:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4827720-4827776:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4830819-4830878:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4838578-4838664:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4840123-4840218:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4842773-4842904:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4844022-4844078:1:exon

fanci
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fanci
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group I protein
translation: MDQKILYLAAGEDTEGLQQCLQQMKENEIGALITTHALKGKEIGMLVRAIFKGSPCSKHEGAACRLFVYKHCMQLVESGDLQSDIATDMIGLLMLEAHHLPGATLAELASLYVDAIKGGSIMNGKSLDLFPTILTVLASQESLSYGGGQLCGEEYKKQLINTLCSSRWDPKCVIHLASMFRDVPVSTEELQFVMMKVLKMFPRLDLQELPPLVYQLLLLSAKGCKKILLEGIIKFFHQQDQLQKEEQMGTESMELEAASVPKDQLRHVEGTIILHIVFAIKLDHDLGRELIKYLKAGQQGDTSLVLCSFSIALLLSVARIHRFEDQVFEFLKTSTIKSFKDRLFQQNSKFLQDLIPAQCSVSEMILETVSNSVFGWDHVTQSLVQLGFIFMDSFGPKGGPFGKVVEINPVAAKTPAQQASRLGAKILLETFKVHEPIRSEILEQVLNRVVTKTSSPISQYLDLLSDIVISAPLILLESSSKVIEAFDHLSYLPLSTVQGLLKAVQPLLKISVSMKDSLILVLRKAMFSSQLDSRKSAVAGFLLLLKNFKLLGSLTYSQCSQTVTASQVQVDVHMRHNASANEALCLEILGSLKRCLSQQSDVRLMLYEGLFDVLRRNSQLANTILQTLLSQLNRYYELEEDLLPPLKLESCITTQGGQIYLQEPLAHLLSCIQNCLAWYKQSLLQGSKGNDDEGEEDNEDSFQRDLEEQLDSITRRMIKSELEDFELDKSADFSLTSNVGIKNSIYAVLVMGVFEVLIEYNFITSNYSTNRFEDVISLFNRYHKLSELLKEKSGKGKSLSSNKTKSLLTFSFVSSLLTALFRDNAQSHEESLSILRSNNEFMRYTVNMALQKIQQLEETGHADGPDGQNIERTFKYLCDITRVLLWRYTSIPSAVEESGKKEKGRTISLLCLEGLLRIFNAMQHRYQNKIQQFFSAIDVTSDGEEEQEIVNITEKAAFHIRQFQRSLVTQLSGDEEDFNSKEAQLLVSILSTLSRLLEPTSEQFAQMLTWTIKICKENNLEDVQFCKGLMNMLFSLYVLRKSPVSLLQELSRDVHSRLGDIDQDIEIEEQSHFAMVNSKTAAPTVVQLILSQVEKVLEEVDWLITKLKAQLSSDRVLTDESSQGSTTREPVEKAIILQLGTLLTTFHELIQTSIPLGGCVDILLKEMGKMYNILTSLVKYYIHGYTTNAAHLPARFEKLVKLSGSHLTPQCYAFITYVQNIQNETMSFAGGAEKKKDKKEMASITAATARVLRETKPVPNLIFAIEQYEKFLIHLTKKSKVNLMQYMKLSTSRDFRINAATLDAALQEQEEGDVQQDGNDDDAQSNTTVDENREPKKKRRKR
SIO_010081: fanci
subclass of: SO_0000673
so part of: fanci
location: join(4746826..4746909,4747387..4747459,4749740..4749870,4759641..4759794,4759946..4760003,4761725..4761766,4761870..4761993,4762430..4762515,4763819..4763951,4766187..4766279,4769741..4769877,4771250..4771430,4772027..4772114,4773442..4773572,4776240..4776310,4778756..4778870,4780060..4780182,4794248..4794316,4796885..4796986,4799009..4799194,4800880..4801001,4804981..4805142,4808237..4808416,4809175..4809341,4812229..4812308,4812489..4812605,4816041..4816092,4816617..4816744,4820353..4820421,4822478..4822574,4825158..4825342,4827720..4827776,4830819..4830878,4838578..4838664,4840123..4840218,4842773..4842904,4844022..4844078)
location: region:4746826-4844078:1
so has part: feature:4746826-4746909:1:exon
so has part: feature:4747387-4747459:1:exon
so has part: feature:4749740-4749870:1:exon
so has part: feature:4759641-4759794:1:exon
so has part: feature:4759946-4760003:1:exon
so has part: feature:4761725-4761766:1:exon
so has part: feature:4761870-4761993:1:exon
so has part: feature:4762430-4762515:1:exon
so has part: feature:4763819-4763951:1:exon
so has part: feature:4766187-4766279:1:exon
so has part: feature:4769741-4769877:1:exon
so has part: feature:4771250-4771430:1:exon
so has part: feature:4772027-4772114:1:exon
so has part: feature:4773442-4773572:1:exon
so has part: feature:4776240-4776310:1:exon
so has part: feature:4778756-4778870:1:exon
so has part: feature:4780060-4780182:1:exon
so has part: feature:4794248-4794316:1:exon
so has part: feature:4796885-4796986:1:exon
so has part: feature:4799009-4799194:1:exon
so has part: feature:4800880-4801001:1:exon
so has part: feature:4804981-4805142:1:exon
so has part: feature:4808237-4808416:1:exon
so has part: feature:4809175-4809341:1:exon
so has part: feature:4812229-4812308:1:exon
so has part: feature:4812489-4812605:1:exon
so has part: feature:4816041-4816092:1:exon
so has part: feature:4816617-4816744:1:exon
so has part: feature:4820353-4820421:1:exon
so has part: feature:4822478-4822574:1:exon
so has part: feature:4825158-4825342:1:exon
so has part: feature:4827720-4827776:1:exon
so has part: feature:4830819-4830878:1:exon
so has part: feature:4838578-4838664:1:exon
so has part: feature:4840123-4840218:1:exon
so has part: feature:4842773-4842904:1:exon
so has part: feature:4844022-4844078:1:exon

XP_032906205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4746826-4746909:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4747387-4747459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4749740-4749870:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4759641-4759794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4759946-4760003:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4761725-4761766:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4761870-4761993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4762430-4762515:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4763819-4763951:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4766187-4766279:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4769741-4769877:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4771250-4771430:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4772027-4772114:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4773442-4773572:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4776240-4776310:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4778756-4778870:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4780060-4780182:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4794248-4794316:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4796885-4796986:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4799009-4799194:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4800880-4801001:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4804981-4805142:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4808237-4808416:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4809175-4809341:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4812229-4812308:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4812489-4812605:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4816041-4816092:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4816617-4816744:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4820353-4820421:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4822478-4822574:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4825158-4825342:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4827720-4827776:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4830819-4830878:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4838578-4838664:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4840123-4840218:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4842773-4842904:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4844022-4844078:1:exon

polg
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: polg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4843472..4899670)
location: region:4843472-4899670:-1
so has part: feature:4843472-4899670:-1:exon
subclass of: SO_0000010

116991593
type: Gene
SIO_000068: ncbigene

position:4843472:-1
position: 4843472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4899670:-1
position: 4899670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4843472-4899670:-1:exon

polg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: polg
product: DNA polymerase gamma, catalytic subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033050316.1
SIO_010081: polg
subclass of: SO_0000673
so part of: polg
location: complement(join(4843472..4844412,4847527..4847687,4849568..4849776,4850919..4851087,4854008..4854130,4855647..4855893,4858011..4858146,4860335..4860452,4861904..4861957,4864900..4865060,4865655..4865774,4869495..4869612,4871662..4871886,4874089..4874221,4877232..4877374,4877896..4878078,4881798..4881877,4884929..4885075,4893151..4893318,4894482..4894677,4896412..4897022,4899559..4899670))
location: region:4843472-4899670:-1
so has part: feature:4899559-4899670:-1:exon
so has part: feature:4896412-4897022:-1:exon
so has part: feature:4894482-4894677:-1:exon
so has part: feature:4893151-4893318:-1:exon
so has part: feature:4884929-4885075:-1:exon
so has part: feature:4881798-4881877:-1:exon
so has part: feature:4877896-4878078:-1:exon
so has part: feature:4877232-4877374:-1:exon
so has part: feature:4874089-4874221:-1:exon
so has part: feature:4871662-4871886:-1:exon
so has part: feature:4869495-4869612:-1:exon
so has part: feature:4865655-4865774:-1:exon
so has part: feature:4864900-4865060:-1:exon
so has part: feature:4861904-4861957:-1:exon
so has part: feature:4860335-4860452:-1:exon
so has part: feature:4858011-4858146:-1:exon
so has part: feature:4855647-4855893:-1:exon
so has part: feature:4854008-4854130:-1:exon
so has part: feature:4850919-4851087:-1:exon
so has part: feature:4849568-4849776:-1:exon
so has part: feature:4847527-4847687:-1:exon
so has part: feature:4843472-4844412:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4899559-4899670:-1:exon

position:4899559:-1
position: 4899559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4896412-4897022:-1:exon

position:4896412:-1
position: 4896412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4897022:-1
position: 4897022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4894482-4894677:-1:exon

position:4894482:-1
position: 4894482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4894677:-1
position: 4894677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4893151-4893318:-1:exon

position:4893151:-1
position: 4893151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4893318:-1
position: 4893318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4884929-4885075:-1:exon

position:4884929:-1
position: 4884929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4885075:-1
position: 4885075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4881798-4881877:-1:exon

position:4881798:-1
position: 4881798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4881877:-1
position: 4881877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4877896-4878078:-1:exon

position:4877896:-1
position: 4877896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4878078:-1
position: 4878078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4877232-4877374:-1:exon

position:4877232:-1
position: 4877232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4877374:-1
position: 4877374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4874089-4874221:-1:exon

position:4874089:-1
position: 4874089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4874221:-1
position: 4874221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4871662-4871886:-1:exon

position:4871662:-1
position: 4871662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4871886:-1
position: 4871886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4869495-4869612:-1:exon

position:4869495:-1
position: 4869495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4869612:-1
position: 4869612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4865655-4865774:-1:exon

position:4865655:-1
position: 4865655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4865774:-1
position: 4865774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4864900-4865060:-1:exon

position:4864900:-1
position: 4864900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4865060:-1
position: 4865060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4861904-4861957:-1:exon

position:4861904:-1
position: 4861904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4861957:-1
position: 4861957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4860335-4860452:-1:exon

position:4860335:-1
position: 4860335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4860452:-1
position: 4860452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4858011-4858146:-1:exon

position:4858011:-1
position: 4858011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4858146:-1
position: 4858146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4855647-4855893:-1:exon

position:4855647:-1
position: 4855647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4855893:-1
position: 4855893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4854008-4854130:-1:exon

position:4854008:-1
position: 4854008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4854130:-1
position: 4854130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4850919-4851087:-1:exon

position:4850919:-1
position: 4850919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4851087:-1
position: 4851087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4849568-4849776:-1:exon

position:4849568:-1
position: 4849568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4849776:-1
position: 4849776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4847527-4847687:-1:exon

position:4847527:-1
position: 4847527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4847687:-1
position: 4847687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4843472-4844412:-1:exon

position:4844412:-1
position: 4844412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

polg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: polg
product: DNA polymerase gamma, catalytic subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033050315.1
SIO_010081: polg
subclass of: SO_0000673
so part of: polg
location: complement(join(4843472..4844412,4847527..4847687,4849568..4849776,4850919..4851087,4854008..4854130,4855647..4855893,4858011..4858146,4860335..4860452,4861904..4861957,4864900..4865060,4865655..4865774,4867066..4867152,4869495..4869612,4871662..4871886,4874089..4874221,4877232..4877374,4877896..4878078,4881798..4881877,4884929..4885075,4893151..4893318,4894482..4894677,4896412..4897022,4899559..4899670))
location: region:4843472-4899670:-1
so has part: feature:4899559-4899670:-1:exon
so has part: feature:4896412-4897022:-1:exon
so has part: feature:4894482-4894677:-1:exon
so has part: feature:4893151-4893318:-1:exon
so has part: feature:4884929-4885075:-1:exon
so has part: feature:4881798-4881877:-1:exon
so has part: feature:4877896-4878078:-1:exon
so has part: feature:4877232-4877374:-1:exon
so has part: feature:4874089-4874221:-1:exon
so has part: feature:4871662-4871886:-1:exon
so has part: feature:4869495-4869612:-1:exon
so has part: feature:4867066-4867152:-1:exon
so has part: feature:4865655-4865774:-1:exon
so has part: feature:4864900-4865060:-1:exon
so has part: feature:4861904-4861957:-1:exon
so has part: feature:4860335-4860452:-1:exon
so has part: feature:4858011-4858146:-1:exon
so has part: feature:4855647-4855893:-1:exon
so has part: feature:4854008-4854130:-1:exon
so has part: feature:4850919-4851087:-1:exon
so has part: feature:4849568-4849776:-1:exon
so has part: feature:4847527-4847687:-1:exon
so has part: feature:4843472-4844412:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4899559-4899670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4896412-4897022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4894482-4894677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4893151-4893318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4884929-4885075:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4881798-4881877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4877896-4878078:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4877232-4877374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4874089-4874221:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4871662-4871886:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4869495-4869612:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4867066-4867152:-1:exon

position:4867066:-1
position: 4867066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4867152:-1
position: 4867152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4865655-4865774:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4864900-4865060:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4861904-4861957:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4860335-4860452:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4858011-4858146:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4855647-4855893:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4854008-4854130:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4850919-4851087:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4849568-4849776:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4847527-4847687:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4843472-4844412:-1:exon

polg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: polg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase subunit gamma-1 isoform X2
translation: MNHLLLKRKSLTSLLPKWTVTVSRWAKTSTASSKPKEGVNRAGSQARMNPLNIQMLSTGLHKQVFGDIEAGYSEEAIQKSIEHLQLHNLWGNETSMLPDVDLQLPKIYGNNIDEHFRTIAQKQSFPYLEAANELLLCDLPEMPMEWTWAVGWTKYSPDGKATMVDFPDERALVFDVEVCSTEGPCPTLAVAVSPTTWYSWCSKRLVEKRYTWSNHLVLADLIPLETSANFTRPSGGEWLERLVIGHNVSYDRARVKEQYLMKATKLRFLDTMSLHMAISGLTGFQRSLWMASKKGKRSGLEEVKRHIKRTKGKFKGPGIGAWDWVDISSINNLADVHALYVGGKPLEKEAREIFIKGNMNDVRDNFQALMQYCALDVKATYEVVCEELPLFLERCPHPVTFAGMLEMGQCYLPVNHNWKRYQDEAQGTYEELQWEMQQSLMNLANDACQLLEAERYKDDPWLWDLEWDTQEFKQKKNTRRKGKASVSTSVLPECSSAAEQEEGLDPGPPPEEEEETKVLASTALLDNLRQTVSLLPKRRQHLPGHPGWYRKICVRWTDPEWLPGPNLISLQMRVTPKLMRLTWDGFPLHYAENHGWGYLVPGRKDNLPTNSDDTDGPSCPYQAIEKLHREQSKQKVQESTVVPETALNEEFLLMEDSMWERNDSGKPPPLLEDSSDIHHHGNGPYPGVNVPGCWFFKLPHKDGNHNNVGSPFAKDFLSKMEDGTLRASGNATTAARALEINKMISFWRNAQKRISSQLVVMLKKSELPRSVTRHNAFEEESTIGAILPQVITAGTVTRRAVEPTWLTASNARGDRVGSELKAMVQVPPGYHLVGADVDSQELWIAAVLGEAHFAKIHGCTAFGWMTLQGKKSSGTDLHSKTAATVGISREHAKIFNYGRIYGAGQPFAERLLMQFNHRLTPQETEEKARQMYAATKGIRRCVLSEDGEWLVREMGVSVERAENGTVSAADAKKIQREAAKRSNGAKWNVVKQRVWDGGTESEMFNKLECIATSPRPRTPVLGCCISRALEPGAVGHEFMTSRVNWVVQSSAVDYLHLMLVSMKWLLEEFNIDGRFCISIHDEVRYLVNSEDRYRAALALQITNLLTRCMFAHKLEMQDLPQSVAFFSTVDIDHCLRKEVMMDCRTPSNTAGLQTRYGIPPGEALDIYQIIEKTNGSLNKRK
SIO_010081: polg
subclass of: SO_0000673
so part of: polg
location: complement(join(4844348..4844412,4847527..4847687,4849568..4849776,4850919..4851087,4854008..4854130,4855647..4855893,4858011..4858146,4860335..4860452,4861904..4861957,4864900..4865060,4865655..4865774,4869495..4869612,4871662..4871886,4874089..4874221,4877232..4877374,4877896..4878078,4881798..4881877,4884929..4885075,4893151..4893318,4894482..4894677,4896412..4897001))
location: region:4844348-4897001:-1
so has part: feature:4896412-4897001:-1:exon
so has part: feature:4894482-4894677:-1:exon
so has part: feature:4893151-4893318:-1:exon
so has part: feature:4884929-4885075:-1:exon
so has part: feature:4881798-4881877:-1:exon
so has part: feature:4877896-4878078:-1:exon
so has part: feature:4877232-4877374:-1:exon
so has part: feature:4874089-4874221:-1:exon
so has part: feature:4871662-4871886:-1:exon
so has part: feature:4869495-4869612:-1:exon
so has part: feature:4865655-4865774:-1:exon
so has part: feature:4864900-4865060:-1:exon
so has part: feature:4861904-4861957:-1:exon
so has part: feature:4860335-4860452:-1:exon
so has part: feature:4858011-4858146:-1:exon
so has part: feature:4855647-4855893:-1:exon
so has part: feature:4854008-4854130:-1:exon
so has part: feature:4850919-4851087:-1:exon
so has part: feature:4849568-4849776:-1:exon
so has part: feature:4847527-4847687:-1:exon
so has part: feature:4844348-4844412:-1:exon

XP_032906207.1
type: Protein
SIO_000068: ncbiprotein

position:4844348:-1
position: 4844348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4897001:-1
position: 4897001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4896412-4897001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4894482-4894677:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4893151-4893318:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4884929-4885075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4881798-4881877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4877896-4878078:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4877232-4877374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4874089-4874221:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4871662-4871886:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4869495-4869612:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4865655-4865774:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4864900-4865060:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4861904-4861957:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4860335-4860452:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4858011-4858146:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4855647-4855893:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4854008-4854130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4850919-4851087:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4849568-4849776:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4847527-4847687:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4844348-4844412:-1:exon

polg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: polg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase subunit gamma-1 isoform X1
translation: MNHLLLKRKSLTSLLPKWTVTVSRWAKTSTASSKPKEGVNRAGSQARMNPLNIQMLSTGLHKQVFGDIEAGYSEEAIQKSIEHLQLHNLWGNETSMLPDVDLQLPKIYGNNIDEHFRTIAQKQSFPYLEAANELLLCDLPEMPMEWTWAVGWTKYSPDGKATMVDFPDERALVFDVEVCSTEGPCPTLAVAVSPTTWYSWCSKRLVEKRYTWSNHLVLADLIPLETSANFTRPSGGEWLERLVIGHNVSYDRARVKEQYLMKATKLRFLDTMSLHMAISGLTGFQRSLWMASKKGKRSGLEEVKRHIKRTKGKFKGPGIGAWDWVDISSINNLADVHALYVGGKPLEKEAREIFIKGNMNDVRDNFQALMQYCALDVKATYEVVCEELPLFLERCPHPVTFAGMLEMGQCYLPVNHNWKRYQDEAQGTYEELQWEMQQSLMNLANDACQLLEAERYKDDPWLWDLEWDTQEFKQKKNTRRKGKASVSTSVLPECSSAAEQEEGLDPGPPPEEEEETKVLASTALLDNLRQTVSLLPKRRQHLPGHPGWYRKICVRWTDPEWLPGPNLISLQMRVTPKLMRLTWDGFPLHYAENHGWGYLVPGRKDNLPTNSDDTDGPSCPYQAIEKLHREQSKQKVQESTVVPETALNEEFLLMEDSMWERGEALSCLETEPEAEFNGYGKGSRKKNSEQNDSGKPPPLLEDSSDIHHHGNGPYPGVNVPGCWFFKLPHKDGNHNNVGSPFAKDFLSKMEDGTLRASGNATTAARALEINKMISFWRNAQKRISSQLVVMLKKSELPRSVTRHNAFEEESTIGAILPQVITAGTVTRRAVEPTWLTASNARGDRVGSELKAMVQVPPGYHLVGADVDSQELWIAAVLGEAHFAKIHGCTAFGWMTLQGKKSSGTDLHSKTAATVGISREHAKIFNYGRIYGAGQPFAERLLMQFNHRLTPQETEEKARQMYAATKGIRRCVLSEDGEWLVREMGVSVERAENGTVSAADAKKIQREAAKRSNGAKWNVVKQRVWDGGTESEMFNKLECIATSPRPRTPVLGCCISRALEPGAVGHEFMTSRVNWVVQSSAVDYLHLMLVSMKWLLEEFNIDGRFCISIHDEVRYLVNSEDRYRAALALQITNLLTRCMFAHKLEMQDLPQSVAFFSTVDIDHCLRKEVMMDCRTPSNTAGLQTRYGIPPGEALDIYQIIEKTNGSLNKRK
SIO_010081: polg
subclass of: SO_0000673
so part of: polg
location: complement(join(4844348..4844412,4847527..4847687,4849568..4849776,4850919..4851087,4854008..4854130,4855647..4855893,4858011..4858146,4860335..4860452,4861904..4861957,4864900..4865060,4865655..4865774,4867066..4867152,4869495..4869612,4871662..4871886,4874089..4874221,4877232..4877374,4877896..4878078,4881798..4881877,4884929..4885075,4893151..4893318,4894482..4894677,4896412..4897001))
location: region:4844348-4897001:-1
so has part: feature:4896412-4897001:-1:exon
so has part: feature:4894482-4894677:-1:exon
so has part: feature:4893151-4893318:-1:exon
so has part: feature:4884929-4885075:-1:exon
so has part: feature:4881798-4881877:-1:exon
so has part: feature:4877896-4878078:-1:exon
so has part: feature:4877232-4877374:-1:exon
so has part: feature:4874089-4874221:-1:exon
so has part: feature:4871662-4871886:-1:exon
so has part: feature:4869495-4869612:-1:exon
so has part: feature:4867066-4867152:-1:exon
so has part: feature:4865655-4865774:-1:exon
so has part: feature:4864900-4865060:-1:exon
so has part: feature:4861904-4861957:-1:exon
so has part: feature:4860335-4860452:-1:exon
so has part: feature:4858011-4858146:-1:exon
so has part: feature:4855647-4855893:-1:exon
so has part: feature:4854008-4854130:-1:exon
so has part: feature:4850919-4851087:-1:exon
so has part: feature:4849568-4849776:-1:exon
so has part: feature:4847527-4847687:-1:exon
so has part: feature:4844348-4844412:-1:exon

XP_032906206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4896412-4897001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4894482-4894677:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4893151-4893318:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4884929-4885075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4881798-4881877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4877896-4878078:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4877232-4877374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4874089-4874221:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4871662-4871886:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4869495-4869612:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4867066-4867152:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4865655-4865774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4864900-4865060:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4861904-4861957:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4860335-4860452:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4858011-4858146:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4855647-4855893:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4854008-4854130:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4850919-4851087:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4849568-4849776:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4847527-4847687:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4844348-4844412:-1:exon

trnar-ucg
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trnar-ucg
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 4900026..4900098
location: region:4900026-4900098:1
so has part: feature:4900026-4900098:1:exon
subclass of: SO_0000663

116991785
type: Gene
SIO_000068: ncbigene

position:4900026:1
position: 4900026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4900098:1
position: 4900098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4900026-4900098:1:exon

trnar-ucg
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 386614
gene: trnar-ucg
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:4900059..4900061,aa:Arg,seq:tcg)
SIO_010081: trnar-ucg
subclass of: SO_0000673
so part of: trnar-ucg
location: 4900026..4900098
location: region:4900026-4900098:1
so has part: feature:4900026-4900098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4900026-4900098:1:exon

LOC116991659
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991659
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4956177..5067094
location: region:4956177-5067094:1
so has part: feature:4956177-5067094:1:exon
subclass of: SO_0000011

116991659
type: Gene
SIO_000068: ncbigene

position:4956177:1
position: 4956177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5067094:1
position: 5067094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4956177-5067094:1:exon

LOC116991659
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991659
product: uncharacterized LOC116991659, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004416860.1
SIO_010081: LOC116991659
subclass of: SO_0000673
so part of: LOC116991659
location: join(4956177..4956468,4967897..4968185,5001070..5001159,5004741..5005371,5005414..5006090)
location: region:4956177-5006090:1
so has part: feature:4956177-4956468:1:exon
so has part: feature:4967897-4968185:1:exon
so has part: feature:5001070-5001159:1:exon
so has part: feature:5004741-5005371:1:exon
so has part: feature:5005414-5006090:1:exon

position:5006090:1
position: 5006090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4956177-4956468:1:exon

position:4956468:1
position: 4956468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4967897-4968185:1:exon

position:4967897:1
position: 4967897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4968185:1
position: 4968185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5001070-5001159:1:exon

position:5001070:1
position: 5001070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5001159:1
position: 5001159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5004741-5005371:1:exon

position:5004741:1
position: 5004741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5005371:1
position: 5005371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5005414-5006090:1:exon

position:5005414:1
position: 5005414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991659
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991659
product: uncharacterized LOC116991659, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416859.1
SIO_010081: LOC116991659
subclass of: SO_0000673
so part of: LOC116991659
location: join(4956184..4956468,4967897..4968185,5001070..5001159,5004741..5005023,5066562..5067094)
location: region:4956184-5067094:1
so has part: feature:4956184-4956468:1:exon
so has part: feature:4967897-4968185:1:exon
so has part: feature:5001070-5001159:1:exon
so has part: feature:5004741-5005023:1:exon
so has part: feature:5066562-5067094:1:exon

position:4956184:1
position: 4956184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4956184-4956468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4967897-4968185:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5001070-5001159:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5004741-5005023:1:exon

position:5005023:1
position: 5005023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5066562-5067094:1:exon

position:5066562:1
position: 5066562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991486
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5080948..5275698
location: region:5080948-5275698:1
so has part: feature:5080948-5275698:1:exon
subclass of: SO_0000011

116991486
type: Gene
SIO_000068: ncbigene

position:5080948:1
position: 5080948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5275698:1
position: 5275698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5080948-5275698:1:exon

LOC116991486
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991486
product: uncharacterized LOC116991486
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416799.1
SIO_010081: LOC116991486
subclass of: SO_0000673
so part of: LOC116991486
location: join(5080948..5081405,5181334..5181424,5275353..5275698)
location: region:5080948-5275698:1
so has part: feature:5080948-5081405:1:exon
so has part: feature:5181334-5181424:1:exon
so has part: feature:5275353-5275698:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5080948-5081405:1:exon

position:5081405:1
position: 5081405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5181334-5181424:1:exon

position:5181334:1
position: 5181334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5181424:1
position: 5181424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5275353-5275698:1:exon

position:5275353:1
position: 5275353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rhcg
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rhcg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5388414..5415691)
location: region:5388414-5415691:-1
so has part: feature:5388414-5415691:-1:exon
subclass of: SO_0000010

116991501
type: Gene
SIO_000068: ncbigene

position:5388414:-1
position: 5388414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5415691:-1
position: 5415691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5388414-5415691:-1:exon

rhcg
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rhcg
product: Rh family C glycoprotein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 113 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033050145.1
SIO_010081: rhcg
subclass of: SO_0000673
so part of: rhcg
location: complement(join(5388414..5388837,5390502..5390592,5394343..5394416,5396767..5396891,5397619..5397755,5399144..5399281,5401885..5402051,5403112..5403253,5404672..5404822,5407868..5408060,5415330..5415691))
location: region:5388414-5415691:-1
so has part: feature:5415330-5415691:-1:exon
so has part: feature:5407868-5408060:-1:exon
so has part: feature:5404672-5404822:-1:exon
so has part: feature:5403112-5403253:-1:exon
so has part: feature:5401885-5402051:-1:exon
so has part: feature:5399144-5399281:-1:exon
so has part: feature:5397619-5397755:-1:exon
so has part: feature:5396767-5396891:-1:exon
so has part: feature:5394343-5394416:-1:exon
so has part: feature:5390502-5390592:-1:exon
so has part: feature:5388414-5388837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5415330-5415691:-1:exon

position:5415330:-1
position: 5415330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5407868-5408060:-1:exon

position:5407868:-1
position: 5407868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5408060:-1
position: 5408060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5404672-5404822:-1:exon

position:5404672:-1
position: 5404672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5404822:-1
position: 5404822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5403112-5403253:-1:exon

position:5403112:-1
position: 5403112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5403253:-1
position: 5403253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5401885-5402051:-1:exon

position:5401885:-1
position: 5401885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5402051:-1
position: 5402051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5399144-5399281:-1:exon

position:5399144:-1
position: 5399144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5399281:-1
position: 5399281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5397619-5397755:-1:exon

position:5397619:-1
position: 5397619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5397755:-1
position: 5397755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5396767-5396891:-1:exon

position:5396767:-1
position: 5396767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5396891:-1
position: 5396891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5394343-5394416:-1:exon

position:5394343:-1
position: 5394343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5394416:-1
position: 5394416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5390502-5390592:-1:exon

position:5390502:-1
position: 5390502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5390592:-1
position: 5390592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5388414-5388837:-1:exon

position:5388837:-1
position: 5388837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rhcg
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rhcg
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ammonium transporter Rh type C
translation: MKNTGMKWKLPLVCLLWQLAMIILFGVFIRYDDESDAHWIETKRIRNITSDIENDFYFRYPSFQDVHVMIFVGFGFLMTFLKRYGFGSVGFNFLIASFSIQWALLMQGWFQSLDFSDGKIKIGVESLINADFCAASVLIAFGAVLGKVSPMQLMVMSVFEVTLYAVNEYIILNLLGARDAGGSMVIHMFGAYFGLAVTRVLYRPQLDQRKNESVYHSDIFAMIGTLFLWMFWPSFNSAISHHGDGQHRGAINTYASLAASVLTTIAISSLLGKKGKINMVHVQNATLAGGVAMGTAGEMMLTPYGALIVGAISGTISTLGFLYLSPVLEKHLHIQDTCGIHNLHAIPGLIGAIVGAVTAAAATEGVYSREGLIAAFGFEGRFEGRTPSEQGGFQAAALCVTLLISLAGGIIVGFILKLPIWGDPPDENCFEDEVYWEVPEDSLYTVLASNTPPLKPNSNENGEP
SIO_010081: rhcg
subclass of: SO_0000673
so part of: rhcg
location: complement(join(5390509..5390592,5394343..5394416,5396767..5396891,5397619..5397755,5399144..5399281,5401885..5402051,5403112..5403253,5404672..5404822,5407868..5408060,5415330..5415513))
location: region:5390509-5415513:-1
so has part: feature:5415330-5415513:-1:exon
so has part: feature:5407868-5408060:-1:exon
so has part: feature:5404672-5404822:-1:exon
so has part: feature:5403112-5403253:-1:exon
so has part: feature:5401885-5402051:-1:exon
so has part: feature:5399144-5399281:-1:exon
so has part: feature:5397619-5397755:-1:exon
so has part: feature:5396767-5396891:-1:exon
so has part: feature:5394343-5394416:-1:exon
so has part: feature:5390509-5390592:-1:exon

XP_032906036.1
type: Protein
SIO_000068: ncbiprotein

position:5390509:-1
position: 5390509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5415513:-1
position: 5415513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5415330-5415513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5407868-5408060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5404672-5404822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5403112-5403253:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5401885-5402051:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5399144-5399281:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5397619-5397755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5396767-5396891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5394343-5394416:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5390509-5390592:-1:exon

LOC116991630
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991630
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5467637..5468659
location: region:5467637-5468659:1
so has part: feature:5467637-5468659:1:exon
subclass of: SO_0000011

116991630
type: Gene
SIO_000068: ncbigene

position:5467637:1
position: 5467637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5468659:1
position: 5468659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5467637-5468659:1:exon

LOC116991630
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991630
product: uncharacterized LOC116991630
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416846.1
SIO_010081: LOC116991630
subclass of: SO_0000673
so part of: LOC116991630
location: join(5467637..5468137,5468280..5468659)
location: region:5467637-5468659:1
so has part: feature:5467637-5468137:1:exon
so has part: feature:5468280-5468659:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5467637-5468137:1:exon

position:5468137:1
position: 5468137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5468280-5468659:1:exon

position:5468280:1
position: 5468280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991550
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5478138..5496374
location: region:5478138-5496374:1
so has part: feature:5478138-5496374:1:exon
subclass of: SO_0000011

116991550
type: Gene
SIO_000068: ncbigene

position:5478138:1
position: 5478138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5496374:1
position: 5496374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5478138-5496374:1:exon

LOC116991550
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991550
product: uncharacterized LOC116991550
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004416824.1
SIO_010081: LOC116991550
subclass of: SO_0000673
so part of: LOC116991550
location: join(5478138..5478148,5490646..5490650,5496341..5496374)
location: region:5478138-5496374:1
so has part: feature:5478138-5478148:1:exon
so has part: feature:5490646-5490650:1:exon
so has part: feature:5496341-5496374:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5478138-5478148:1:exon

position:5478148:1
position: 5478148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5490646-5490650:1:exon

position:5490646:1
position: 5490646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5490650:1
position: 5490650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5496341-5496374:1:exon

position:5496341:1
position: 5496341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ticrr
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ticrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5522542..5569211
location: region:5522542-5569211:1
so has part: feature:5522542-5569211:1:exon
subclass of: SO_0000010

116991673
type: Gene
SIO_000068: ncbigene

position:5522542:1
position: 5522542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5569211:1
position: 5569211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5522542-5569211:1:exon

ticrr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ticrr
product: TOPBP1 interacting checkpoint and replication regulator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033050492.1
SIO_010081: ticrr
subclass of: SO_0000673
so part of: ticrr
location: join(5522542..5523234,5528111..5528423,5531606..5531841,5532069..5532306,5533365..5533497,5533583..5533719,5534288..5534491,5536338..5536489,5540647..5540747,5541477..5541570,5543878..5543960,5546057..5546290,5547563..5547650,5549229..5549307,5549955..5550086,5550866..5550956,5551083..5551147,5553252..5553392,5554476..5554579,5554947..5557857,5561785..5561907,5567761..5569211)
location: region:5522542-5569211:1
so has part: feature:5522542-5523234:1:exon
so has part: feature:5528111-5528423:1:exon
so has part: feature:5531606-5531841:1:exon
so has part: feature:5532069-5532306:1:exon
so has part: feature:5533365-5533497:1:exon
so has part: feature:5533583-5533719:1:exon
so has part: feature:5534288-5534491:1:exon
so has part: feature:5536338-5536489:1:exon
so has part: feature:5540647-5540747:1:exon
so has part: feature:5541477-5541570:1:exon
so has part: feature:5543878-5543960:1:exon
so has part: feature:5546057-5546290:1:exon
so has part: feature:5547563-5547650:1:exon
so has part: feature:5549229-5549307:1:exon
so has part: feature:5549955-5550086:1:exon
so has part: feature:5550866-5550956:1:exon
so has part: feature:5551083-5551147:1:exon
so has part: feature:5553252-5553392:1:exon
so has part: feature:5554476-5554579:1:exon
so has part: feature:5554947-5557857:1:exon
so has part: feature:5561785-5561907:1:exon
so has part: feature:5567761-5569211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5522542-5523234:1:exon

position:5523234:1
position: 5523234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5528111-5528423:1:exon

position:5528111:1
position: 5528111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5528423:1
position: 5528423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5531606-5531841:1:exon

position:5531606:1
position: 5531606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5531841:1
position: 5531841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5532069-5532306:1:exon

position:5532069:1
position: 5532069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5532306:1
position: 5532306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5533365-5533497:1:exon

position:5533365:1
position: 5533365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5533497:1
position: 5533497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5533583-5533719:1:exon

position:5533583:1
position: 5533583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5533719:1
position: 5533719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5534288-5534491:1:exon

position:5534288:1
position: 5534288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5534491:1
position: 5534491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5536338-5536489:1:exon

position:5536338:1
position: 5536338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5536489:1
position: 5536489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5540647-5540747:1:exon

position:5540647:1
position: 5540647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5540747:1
position: 5540747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5541477-5541570:1:exon

position:5541477:1
position: 5541477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5541570:1
position: 5541570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5543878-5543960:1:exon

position:5543878:1
position: 5543878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5543960:1
position: 5543960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5546057-5546290:1:exon

position:5546057:1
position: 5546057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5546290:1
position: 5546290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5547563-5547650:1:exon

position:5547563:1
position: 5547563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5547650:1
position: 5547650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5549229-5549307:1:exon

position:5549229:1
position: 5549229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5549307:1
position: 5549307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5549955-5550086:1:exon

position:5549955:1
position: 5549955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5550086:1
position: 5550086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5550866-5550956:1:exon

position:5550866:1
position: 5550866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5550956:1
position: 5550956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5551083-5551147:1:exon

position:5551083:1
position: 5551083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5551147:1
position: 5551147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5553252-5553392:1:exon

position:5553252:1
position: 5553252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5553392:1
position: 5553392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5554476-5554579:1:exon

position:5554476:1
position: 5554476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5554579:1
position: 5554579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5554947-5557857:1:exon

position:5554947:1
position: 5554947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5557857:1
position: 5557857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5561785-5561907:1:exon

position:5561785:1
position: 5561785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5561907:1
position: 5561907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5567761-5569211:1:exon

position:5567761:1
position: 5567761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ticrr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ticrr
product: TOPBP1 interacting checkpoint and replication regulator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033050493.1
SIO_010081: ticrr
subclass of: SO_0000673
so part of: ticrr
location: join(5522542..5523234,5528111..5528423,5531606..5531841,5532069..5532306,5533368..5533497,5533583..5533719,5534288..5534491,5536338..5536489,5540647..5540747,5541477..5541570,5543878..5543960,5546057..5546290,5547563..5547650,5549229..5549307,5549955..5550086,5550866..5550956,5551083..5551147,5553252..5553392,5554476..5554579,5554947..5557857,5561785..5561907,5567761..5569211)
location: region:5522542-5569211:1
so has part: feature:5522542-5523234:1:exon
so has part: feature:5528111-5528423:1:exon
so has part: feature:5531606-5531841:1:exon
so has part: feature:5532069-5532306:1:exon
so has part: feature:5533368-5533497:1:exon
so has part: feature:5533583-5533719:1:exon
so has part: feature:5534288-5534491:1:exon
so has part: feature:5536338-5536489:1:exon
so has part: feature:5540647-5540747:1:exon
so has part: feature:5541477-5541570:1:exon
so has part: feature:5543878-5543960:1:exon
so has part: feature:5546057-5546290:1:exon
so has part: feature:5547563-5547650:1:exon
so has part: feature:5549229-5549307:1:exon
so has part: feature:5549955-5550086:1:exon
so has part: feature:5550866-5550956:1:exon
so has part: feature:5551083-5551147:1:exon
so has part: feature:5553252-5553392:1:exon
so has part: feature:5554476-5554579:1:exon
so has part: feature:5554947-5557857:1:exon
so has part: feature:5561785-5561907:1:exon
so has part: feature:5567761-5569211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5522542-5523234:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5528111-5528423:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5531606-5531841:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5532069-5532306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5533368-5533497:1:exon

position:5533368:1
position: 5533368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5533583-5533719:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5534288-5534491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5536338-5536489:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5540647-5540747:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5541477-5541570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5543878-5543960:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5546057-5546290:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5547563-5547650:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5549229-5549307:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5549955-5550086:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5550866-5550956:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5551083-5551147:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5553252-5553392:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5554476-5554579:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5554947-5557857:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5561785-5561907:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5567761-5569211:1:exon

ticrr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ticrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: treslin isoform X1
translation: MGWHNVALLVDVACGDGAGAGARRAALRLLLHSARGAGLPALRWAFKPFNTAAMRGCSSRGRAFRELRLEQLRELEEALEPGRGSSTATAAATHTALVEALSDLPWDRPDITSPAKAARGAAAHAPLPRARNTLYLLAPCPMSRAQLRAFLQLPLSAADTCHQVAERIVPPPVRTLLSAHNIALHWVDIQPLQQFNGTHDHIGYQLISEVMRMVGGSLIPFAALMELSLKDCHLPLEKTSLDSQVDQKNEMNAKGCVKKLKTVDALFPFDCNMNYLVSVDSFYRNTFPLQHGLLTIPHGEQKVCCPIILEPISCTQKYLTDSINIIVKGVMSNWDPKRRDLLPTCSWVLQPAEQKDTKDNCFLPRLLLEMACNELHLVADVRMNDCLPPCTGVLSPLLCNTAMFTVIWQQTQEFEELLFQAGIAEKIEGVSPDVSDIVDKALSVISDIPEECLTCSEDVTVPDWVDLELSETSQQNVSFIEGWFPLSELSGASSTLMESFRSIHAVDDKENIDSELALTGHLAEFYQRKSASEAGATGEHANKRKRSGPRTPIRQKMKSMSRSLQMLNVARLNVKAQKSLTDGVQPLTGEKATNPSKKRSGDRRKNKRARKVLADFKSSEEMVSSLKETYQKYIVEEELSQFNFTKNAITVMKMYLESTNTEDLEATCINLIRMQLLKSSKSIRQLYGNQEDKERKVRDCQLQVLLRLEVCEQFPSLQSDTEQLEHFVEEMTNLLRIISLTKDTTFLAKFLEEEILKTYLLTVPKILGELYFGLGQNVPERLSAVLPADFFSDESMSQEPESPGESQPPSLAPNSSCAEFEEQLEKLLTRSSRKRRNLPLTRHRSMSELSHNLRQIQMPKKSVKPEKVQSRLSLGIEQPVLLESSSPIEVQEVTKVRRNLFNREMLSPRKKSKMPRSRSVSVDKGERQQCSEENKGTRKLLTKNVTETPLHKQMSCRLLHKQIQGRRSESNSDVNVVEESPDKALPVYPCLRRSPRIRKASLARSHSNSFYSDSRPMSRSLERVQSLSQKANGAGTQTIQSPTRVLFGAVVGLVSPKRKSICSPSEGLLDPKSYPKQMLMSPDKSRAAQEALSTLHYLTPRKKATNGKSLNVAKNLLIERFSPRNMSTDSQLQSPRRSERLIKATSKESNSPWKIEGQSLFRYPFNVSPQLKPTSPYKDQSLVKLSSRRSERLASPFRNISTTESSSQVKAACKNVPVSNCSVTESEELSPSCLIDTWPKNKLSKVSTSVKQKLRKSKSEELLISCMPRKCFDSPPKLDLLECSKKTGERGLDSSPSDKSTYLRSNSSTLSTPRSISKLSPPTPLKTPVMTRSMSLLHSPTNFSESPVEYRVTPKSQLKTPSKSATPPKNLVKTRSMSNRTPAKSQSKPPSKHLKTSPKFPVEIESVLDTTPLYIEESGISKSTAISPCLKSRMRARAGLNIVFSTVDQKTASKCNSAPDKSPAETLSPTMSSSMSPSLNDAKRILGVTELKHNVCDLFEAWTILDTSIKTGSKTEAVIVPINIPPKPITAAPGLNHELKTPEKNKSTIHKAKNKSTKVFGKSKSDAMHQGNIGIPNITENSIPCQTTLDTTIDNSQNHRSNAIVALDSSQPVSCPSENTTSELISSVNLILEKPDLSHLVSRMYSDAGSLQGEESSDVSQVNILPRDGTGLRMKIAVQRNLSNSGVLDFVAPTKLPLLQKESMSYEFRWTPDRRQRLAAARQQQMLEDPMGMSPPKVLNRPSMPIYEVELEMQDSGLPKLRFKRTNSSTGIKPKVEKSESNHSPPSVCLKKSGCESPLGESQAQWCVKHSGKTEGHISPSLCFHSCLSTPAKATPRKGGVQTYICQSYTPTQCSSNTSSPSQPDLGTVPWTPSPTHKPWLSQTPDAIKNWPRKKKAATTPLSRKRQKMDKPAVAQKDGSCSTEHESSKTVPLEELSMEGVSRLQDRSPNVEWDQRLPDSPVKTFALRSRKRGSGFISPVATEGRDVKKRKETHFTGTCS…
SIO_010081: ticrr
subclass of: SO_0000673
so part of: ticrr
location: join(5522653..5523234,5528111..5528423,5531606..5531841,5532069..5532306,5533365..5533497,5533583..5533719,5534288..5534491,5536338..5536489,5540647..5540747,5541477..5541570,5543878..5543960,5546057..5546290,5547563..5547650,5549229..5549307,5549955..5550086,5550866..5550956,5551083..5551147,5553252..5553392,5554476..5554579,5554947..5557857,5561785..5561907,5567761..5567903)
location: region:5522653-5567903:1
so has part: feature:5522653-5523234:1:exon
so has part: feature:5528111-5528423:1:exon
so has part: feature:5531606-5531841:1:exon
so has part: feature:5532069-5532306:1:exon
so has part: feature:5533365-5533497:1:exon
so has part: feature:5533583-5533719:1:exon
so has part: feature:5534288-5534491:1:exon
so has part: feature:5536338-5536489:1:exon
so has part: feature:5540647-5540747:1:exon
so has part: feature:5541477-5541570:1:exon
so has part: feature:5543878-5543960:1:exon
so has part: feature:5546057-5546290:1:exon
so has part: feature:5547563-5547650:1:exon
so has part: feature:5549229-5549307:1:exon
so has part: feature:5549955-5550086:1:exon
so has part: feature:5550866-5550956:1:exon
so has part: feature:5551083-5551147:1:exon
so has part: feature:5553252-5553392:1:exon
so has part: feature:5554476-5554579:1:exon
so has part: feature:5554947-5557857:1:exon
so has part: feature:5561785-5561907:1:exon
so has part: feature:5567761-5567903:1:exon

XP_032906383.1
type: Protein
SIO_000068: ncbiprotein

position:5522653:1
position: 5522653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5567903:1
position: 5567903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5522653-5523234:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5528111-5528423:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5531606-5531841:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5532069-5532306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5533365-5533497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5533583-5533719:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5534288-5534491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5536338-5536489:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5540647-5540747:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5541477-5541570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5543878-5543960:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5546057-5546290:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5547563-5547650:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5549229-5549307:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5549955-5550086:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5550866-5550956:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5551083-5551147:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5553252-5553392:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5554476-5554579:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5554947-5557857:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5561785-5561907:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5567761-5567903:1:exon

ticrr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ticrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: treslin isoform X2
translation: MGWHNVALLVDVACGDGAGAGARRAALRLLLHSARGAGLPALRWAFKPFNTAAMRGCSSRGRAFRELRLEQLRELEEALEPGRGSSTATAAATHTALVEALSDLPWDRPDITSPAKAARGAAAHAPLPRARNTLYLLAPCPMSRAQLRAFLQLPLSAADTCHQVAERIVPPPVRTLLSAHNIALHWVDIQPLQQFNGTHDHIGYQLISEVMRMVGGSLIPFAALMELSLKDCHLPLEKTSLDSQVDQKNEMNAKGCVKKLKTVDALFPFDCNMNYLVSVDSFYRNTFPLQHGLLTIPHGEQKVCCPIILEPISCTQKYLTDSINIIVKGVMSNWDPKRRDLLPTCSWVLQPAEQKDTKDNCFLPRLLLEMACNELHLVADVRMNDCLPPCTGVLSPLLCNTAMFTVIWQQTQEFEELLFQAGIAEKIEGVSPDVSDIVDKALSVISDIPEECLTCSDVTVPDWVDLELSETSQQNVSFIEGWFPLSELSGASSTLMESFRSIHAVDDKENIDSELALTGHLAEFYQRKSASEAGATGEHANKRKRSGPRTPIRQKMKSMSRSLQMLNVARLNVKAQKSLTDGVQPLTGEKATNPSKKRSGDRRKNKRARKVLADFKSSEEMVSSLKETYQKYIVEEELSQFNFTKNAITVMKMYLESTNTEDLEATCINLIRMQLLKSSKSIRQLYGNQEDKERKVRDCQLQVLLRLEVCEQFPSLQSDTEQLEHFVEEMTNLLRIISLTKDTTFLAKFLEEEILKTYLLTVPKILGELYFGLGQNVPERLSAVLPADFFSDESMSQEPESPGESQPPSLAPNSSCAEFEEQLEKLLTRSSRKRRNLPLTRHRSMSELSHNLRQIQMPKKSVKPEKVQSRLSLGIEQPVLLESSSPIEVQEVTKVRRNLFNREMLSPRKKSKMPRSRSVSVDKGERQQCSEENKGTRKLLTKNVTETPLHKQMSCRLLHKQIQGRRSESNSDVNVVEESPDKALPVYPCLRRSPRIRKASLARSHSNSFYSDSRPMSRSLERVQSLSQKANGAGTQTIQSPTRVLFGAVVGLVSPKRKSICSPSEGLLDPKSYPKQMLMSPDKSRAAQEALSTLHYLTPRKKATNGKSLNVAKNLLIERFSPRNMSTDSQLQSPRRSERLIKATSKESNSPWKIEGQSLFRYPFNVSPQLKPTSPYKDQSLVKLSSRRSERLASPFRNISTTESSSQVKAACKNVPVSNCSVTESEELSPSCLIDTWPKNKLSKVSTSVKQKLRKSKSEELLISCMPRKCFDSPPKLDLLECSKKTGERGLDSSPSDKSTYLRSNSSTLSTPRSISKLSPPTPLKTPVMTRSMSLLHSPTNFSESPVEYRVTPKSQLKTPSKSATPPKNLVKTRSMSNRTPAKSQSKPPSKHLKTSPKFPVEIESVLDTTPLYIEESGISKSTAISPCLKSRMRARAGLNIVFSTVDQKTASKCNSAPDKSPAETLSPTMSSSMSPSLNDAKRILGVTELKHNVCDLFEAWTILDTSIKTGSKTEAVIVPINIPPKPITAAPGLNHELKTPEKNKSTIHKAKNKSTKVFGKSKSDAMHQGNIGIPNITENSIPCQTTLDTTIDNSQNHRSNAIVALDSSQPVSCPSENTTSELISSVNLILEKPDLSHLVSRMYSDAGSLQGEESSDVSQVNILPRDGTGLRMKIAVQRNLSNSGVLDFVAPTKLPLLQKESMSYEFRWTPDRRQRLAAARQQQMLEDPMGMSPPKVLNRPSMPIYEVELEMQDSGLPKLRFKRTNSSTGIKPKVEKSESNHSPPSVCLKKSGCESPLGESQAQWCVKHSGKTEGHISPSLCFHSCLSTPAKATPRKGGVQTYICQSYTPTQCSSNTSSPSQPDLGTVPWTPSPTHKPWLSQTPDAIKNWPRKKKAATTPLSRKRQKMDKPAVAQKDGSCSTEHESSKTVPLEELSMEGVSRLQDRSPNVEWDQRLPDSPVKTFALRSRKRGSGFISPVATEGRDVKKRKETHFTGTCSD…
SIO_010081: ticrr
subclass of: SO_0000673
so part of: ticrr
location: join(5522653..5523234,5528111..5528423,5531606..5531841,5532069..5532306,5533368..5533497,5533583..5533719,5534288..5534491,5536338..5536489,5540647..5540747,5541477..5541570,5543878..5543960,5546057..5546290,5547563..5547650,5549229..5549307,5549955..5550086,5550866..5550956,5551083..5551147,5553252..5553392,5554476..5554579,5554947..5557857,5561785..5561907,5567761..5567903)
location: region:5522653-5567903:1
so has part: feature:5522653-5523234:1:exon
so has part: feature:5528111-5528423:1:exon
so has part: feature:5531606-5531841:1:exon
so has part: feature:5532069-5532306:1:exon
so has part: feature:5533368-5533497:1:exon
so has part: feature:5533583-5533719:1:exon
so has part: feature:5534288-5534491:1:exon
so has part: feature:5536338-5536489:1:exon
so has part: feature:5540647-5540747:1:exon
so has part: feature:5541477-5541570:1:exon
so has part: feature:5543878-5543960:1:exon
so has part: feature:5546057-5546290:1:exon
so has part: feature:5547563-5547650:1:exon
so has part: feature:5549229-5549307:1:exon
so has part: feature:5549955-5550086:1:exon
so has part: feature:5550866-5550956:1:exon
so has part: feature:5551083-5551147:1:exon
so has part: feature:5553252-5553392:1:exon
so has part: feature:5554476-5554579:1:exon
so has part: feature:5554947-5557857:1:exon
so has part: feature:5561785-5561907:1:exon
so has part: feature:5567761-5567903:1:exon

XP_032906384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5522653-5523234:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5528111-5528423:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5531606-5531841:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5532069-5532306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5533368-5533497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5533583-5533719:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5534288-5534491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5536338-5536489:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5540647-5540747:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5541477-5541570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5543878-5543960:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5546057-5546290:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5547563-5547650:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5549229-5549307:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5549955-5550086:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5550866-5550956:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5551083-5551147:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5553252-5553392:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5554476-5554579:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5554947-5557857:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5561785-5561907:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5567761-5567903:1:exon

rlbp1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rlbp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5616491..5664220
location: region:5616491-5664220:1
so has part: feature:5616491-5664220:1:exon
subclass of: SO_0000010

116991607
type: Gene
SIO_000068: ncbigene

position:5616491:1
position: 5616491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5664220:1
position: 5664220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5616491-5664220:1:exon

rlbp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rlbp1
product: retinaldehyde binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033050351.1
SIO_010081: rlbp1
subclass of: SO_0000673
so part of: rlbp1
location: join(5616491..5616613,5634995..5635040,5635882..5636013,5642347..5642551,5655384..5655562,5658059..5658217,5663894..5664220)
location: region:5616491-5664220:1
so has part: feature:5616491-5616613:1:exon
so has part: feature:5634995-5635040:1:exon
so has part: feature:5635882-5636013:1:exon
so has part: feature:5642347-5642551:1:exon
so has part: feature:5655384-5655562:1:exon
so has part: feature:5658059-5658217:1:exon
so has part: feature:5663894-5664220:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5616491-5616613:1:exon

position:5616613:1
position: 5616613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5634995-5635040:1:exon

position:5634995:1
position: 5634995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5635040:1
position: 5635040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5635882-5636013:1:exon

position:5635882:1
position: 5635882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5636013:1
position: 5636013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5642347-5642551:1:exon

position:5642347:1
position: 5642347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5642551:1
position: 5642551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5655384-5655562:1:exon

position:5655384:1
position: 5655384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5655562:1
position: 5655562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5658059-5658217:1:exon

position:5658059:1
position: 5658059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5658217:1
position: 5658217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5663894-5664220:1:exon

position:5663894:1
position: 5663894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rlbp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rlbp1
product: retinaldehyde binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033050350.1
SIO_010081: rlbp1
subclass of: SO_0000673
so part of: rlbp1
location: join(5616493..5616613,5634995..5635040,5635882..5636013,5642347..5642551,5655384..5655562,5658059..5658217,5661864..5661974,5663894..5664220)
location: region:5616493-5664220:1
so has part: feature:5616493-5616613:1:exon
so has part: feature:5634995-5635040:1:exon
so has part: feature:5635882-5636013:1:exon
so has part: feature:5642347-5642551:1:exon
so has part: feature:5655384-5655562:1:exon
so has part: feature:5658059-5658217:1:exon
so has part: feature:5661864-5661974:1:exon
so has part: feature:5663894-5664220:1:exon

position:5616493:1
position: 5616493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5616493-5616613:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5634995-5635040:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5635882-5636013:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5642347-5642551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5655384-5655562:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5658059-5658217:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5661864-5661974:1:exon

position:5661864:1
position: 5661864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5661974:1
position: 5661974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5663894-5664220:1:exon

rlbp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rlbp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinaldehyde-binding protein 1 isoform X1
translation: MAETQTGTFRMVSEQEQALRTKLDHLSTKDHGPVIGKCDLLPPHTLQKAKDELNETEEKRVACVTELQNLVQDSASSGEEFAKIVLEKTKDKDDSFFLRFIRARKFDVKRSYELLKGYVRFREQYPELFENLTPEAVRSTIEAGYPGILTERDKYGRVVLLFNIENWDYEEITFDEILRAYCVILEKLLENEETQINGFCIIENFKGFTMQQASGIKLSELKKMVDMLQDSFPARFKAVHFIHQPWYFTTTYNMVKPFLKGKLLERVHVHGEELESFFKEIDADILPEEFGGSQAKYNGKIIAEKIFGTESEDTAL
SIO_010081: rlbp1
subclass of: SO_0000673
so part of: rlbp1
location: join(5635029..5635040,5635882..5636013,5642347..5642551,5655384..5655562,5658059..5658217,5661864..5661974,5663894..5664046)
location: region:5635029-5664046:1
so has part: feature:5635029-5635040:1:exon
so has part: feature:5635882-5636013:1:exon
so has part: feature:5642347-5642551:1:exon
so has part: feature:5655384-5655562:1:exon
so has part: feature:5658059-5658217:1:exon
so has part: feature:5661864-5661974:1:exon
so has part: feature:5663894-5664046:1:exon

XP_032906241.1
type: Protein
SIO_000068: ncbiprotein

position:5635029:1
position: 5635029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5664046:1
position: 5664046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5635029-5635040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5635882-5636013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5642347-5642551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5655384-5655562:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5658059-5658217:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5661864-5661974:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5663894-5664046:1:exon

rlbp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rlbp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinaldehyde-binding protein 1 isoform X2
translation: MAETQTGTFRMVSEQEQALRTKLDHLSTKDHGPVIGKCDLLPPHTLQKAKDELNETEEKRVACVTELQNLVQDSASSGEEFAKIVLEKTKDKDDSFFLRFIRARKFDVKRSYELLKGYVRFREQYPELFENLTPEAVRSTIEAGYPGILTERDKYGRVVLLFNIENWDYEEITFDEILRAYCVILEKLLENEETQINGFCIIENFKGFTMQQASGIKLSELKKMVDMLQVHVHGEELESFFKEIDADILPEEFGGSQAKYNGKIIAEKIFGTESEDTAL
SIO_010081: rlbp1
subclass of: SO_0000673
so part of: rlbp1
location: join(5635029..5635040,5635882..5636013,5642347..5642551,5655384..5655562,5658059..5658217,5663894..5664046)
location: region:5635029-5664046:1
so has part: feature:5635029-5635040:1:exon
so has part: feature:5635882-5636013:1:exon
so has part: feature:5642347-5642551:1:exon
so has part: feature:5655384-5655562:1:exon
so has part: feature:5658059-5658217:1:exon
so has part: feature:5663894-5664046:1:exon

XP_032906242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5635029-5635040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5635882-5636013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5642347-5642551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5655384-5655562:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5658059-5658217:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5663894-5664046:1:exon

abhd2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: abhd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5699960..5782918)
location: region:5699960-5782918:-1
so has part: feature:5699960-5782918:-1:exon
subclass of: SO_0000010

116991660
type: Gene
SIO_000068: ncbigene

position:5699960:-1
position: 5699960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5782918:-1
position: 5782918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5699960-5782918:-1:exon

abhd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: abhd2
product: abhydrolase domain containing 2, acylglycerol lipase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 21 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033050448.1
SIO_010081: abhd2
subclass of: SO_0000673
so part of: abhd2
location: complement(join(5699960..5702226,5714296..5714380,5720229..5720298,5723194..5723307,5726310..5726402,5736178..5736361,5748149..5748316,5749932..5750107,5766369..5766588,5768204..5768302,5782844..5782918))
location: region:5699960-5782918:-1
so has part: feature:5782844-5782918:-1:exon
so has part: feature:5768204-5768302:-1:exon
so has part: feature:5766369-5766588:-1:exon
so has part: feature:5749932-5750107:-1:exon
so has part: feature:5748149-5748316:-1:exon
so has part: feature:5736178-5736361:-1:exon
so has part: feature:5726310-5726402:-1:exon
so has part: feature:5723194-5723307:-1:exon
so has part: feature:5720229-5720298:-1:exon
so has part: feature:5714296-5714380:-1:exon
so has part: feature:5699960-5702226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5782844-5782918:-1:exon

position:5782844:-1
position: 5782844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5768204-5768302:-1:exon

position:5768204:-1
position: 5768204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5768302:-1
position: 5768302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5766369-5766588:-1:exon

position:5766369:-1
position: 5766369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5766588:-1
position: 5766588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5749932-5750107:-1:exon

position:5749932:-1
position: 5749932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5750107:-1
position: 5750107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5748149-5748316:-1:exon

position:5748149:-1
position: 5748149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5748316:-1
position: 5748316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5736178-5736361:-1:exon

position:5736178:-1
position: 5736178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5736361:-1
position: 5736361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5726310-5726402:-1:exon

position:5726310:-1
position: 5726310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5726402:-1
position: 5726402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5723194-5723307:-1:exon

position:5723194:-1
position: 5723194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5723307:-1
position: 5723307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5720229-5720298:-1:exon

position:5720229:-1
position: 5720229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5720298:-1
position: 5720298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5714296-5714380:-1:exon

position:5714296:-1
position: 5714296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5714380:-1
position: 5714380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5699960-5702226:-1:exon

position:5702226:-1
position: 5702226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

abhd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: abhd2
product: abhydrolase domain containing 2, acylglycerol lipase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 21 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_033050447.1
SIO_010081: abhd2
subclass of: SO_0000673
so part of: abhd2
location: complement(join(5699960..5702226,5714296..5714380,5720229..5720298,5723194..5723307,5726310..5726402,5736178..5736361,5748149..5748316,5749932..5750107,5766369..5766588,5768204..5768302,5775483..5775540,5782844..5782904))
location: region:5699960-5782904:-1
so has part: feature:5782844-5782904:-1:exon
so has part: feature:5775483-5775540:-1:exon
so has part: feature:5768204-5768302:-1:exon
so has part: feature:5766369-5766588:-1:exon
so has part: feature:5749932-5750107:-1:exon
so has part: feature:5748149-5748316:-1:exon
so has part: feature:5736178-5736361:-1:exon
so has part: feature:5726310-5726402:-1:exon
so has part: feature:5723194-5723307:-1:exon
so has part: feature:5720229-5720298:-1:exon
so has part: feature:5714296-5714380:-1:exon
so has part: feature:5699960-5702226:-1:exon

position:5782904:-1
position: 5782904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5782844-5782904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5775483-5775540:-1:exon

position:5775483:-1
position: 5775483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5775540:-1
position: 5775540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5768204-5768302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5766369-5766588:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5749932-5750107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5748149-5748316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5736178-5736361:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5726310-5726402:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5723194-5723307:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5720229-5720298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5714296-5714380:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5699960-5702226:-1:exon

abhd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: abhd2
product: abhydrolase domain containing 2, acylglycerol lipase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033050449.1
SIO_010081: abhd2
subclass of: SO_0000673
so part of: abhd2
location: complement(join(5699960..5702226,5714296..5714380,5720229..5720298,5723194..5723307,5726310..5726402,5736178..5736361,5748149..5748316,5749932..5750107,5766369..5766588,5768204..5768302,5775221..5775456))
location: region:5699960-5775456:-1
so has part: feature:5775221-5775456:-1:exon
so has part: feature:5768204-5768302:-1:exon
so has part: feature:5766369-5766588:-1:exon
so has part: feature:5749932-5750107:-1:exon
so has part: feature:5748149-5748316:-1:exon
so has part: feature:5736178-5736361:-1:exon
so has part: feature:5726310-5726402:-1:exon
so has part: feature:5723194-5723307:-1:exon
so has part: feature:5720229-5720298:-1:exon
so has part: feature:5714296-5714380:-1:exon
so has part: feature:5699960-5702226:-1:exon

position:5775456:-1
position: 5775456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5775221-5775456:-1:exon

position:5775221:-1
position: 5775221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5768204-5768302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5766369-5766588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5749932-5750107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5748149-5748316:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5736178-5736361:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5726310-5726402:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5723194-5723307:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5720229-5720298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5714296-5714380:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5699960-5702226:-1:exon

abhd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: abhd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monoacylglycerol lipase ABHD2
translation: MADSESVRIAPEMPAMFDGMKLAAVAAVLYIIVRCLNLKSPTASPELTFQDTPLTRFLLKSCPLLTKEYIPPLIWGKSGHVQTALYGKMGRVSSPHPYGLRKYLPMPDGATATWDLFEPMAEHNTGEDITMVICPGIANHSEKQYIRTFVDYAQRNGYRCAVLNHLGALPNIELTSPRMFTYGCTWEFGAMVNNIKKAFPQTQLVVVGFSLGGNIVCKFLGEDQVNQENVLCCISVCQGYSALRAQETFLQWDQCRRFYNFLMADNMKKIILFHRKILFGENGCKSPNALVDVDLSKLYTATSLMHIDDNIMRKFHGYDTLKEYYEQESCMHYLHNIQIPLLLVNAQDDPLVHESLLTIPRSLAEKKENVMFVLTLHGGHLGFFEGAVLFPKPLTWMDKLILEYTNAICHWEKNKPQCTTSSDQNCSDHSE
SIO_010081: abhd2
subclass of: SO_0000673
so part of: abhd2
location: complement(join(5702024..5702226,5714296..5714380,5720229..5720298,5723194..5723307,5726310..5726402,5736178..5736361,5748149..5748316,5749932..5750107,5766369..5766571))
location: region:5702024-5766571:-1
so has part: feature:5766369-5766571:-1:exon
so has part: feature:5749932-5750107:-1:exon
so has part: feature:5748149-5748316:-1:exon
so has part: feature:5736178-5736361:-1:exon
so has part: feature:5726310-5726402:-1:exon
so has part: feature:5723194-5723307:-1:exon
so has part: feature:5720229-5720298:-1:exon
so has part: feature:5714296-5714380:-1:exon
so has part: feature:5702024-5702226:-1:exon

XP_032906338.1
type: Protein
SIO_000068: ncbiprotein

position:5702024:-1
position: 5702024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5766571:-1
position: 5766571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5766369-5766571:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5749932-5750107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5748149-5748316:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5736178-5736361:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5726310-5726402:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5723194-5723307:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5720229-5720298:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5714296-5714380:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5702024-5702226:-1:exon

abhd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: abhd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monoacylglycerol lipase ABHD2
translation: MADSESVRIAPEMPAMFDGMKLAAVAAVLYIIVRCLNLKSPTASPELTFQDTPLTRFLLKSCPLLTKEYIPPLIWGKSGHVQTALYGKMGRVSSPHPYGLRKYLPMPDGATATWDLFEPMAEHNTGEDITMVICPGIANHSEKQYIRTFVDYAQRNGYRCAVLNHLGALPNIELTSPRMFTYGCTWEFGAMVNNIKKAFPQTQLVVVGFSLGGNIVCKFLGEDQVNQENVLCCISVCQGYSALRAQETFLQWDQCRRFYNFLMADNMKKIILFHRKILFGENGCKSPNALVDVDLSKLYTATSLMHIDDNIMRKFHGYDTLKEYYEQESCMHYLHNIQIPLLLVNAQDDPLVHESLLTIPRSLAEKKENVMFVLTLHGGHLGFFEGAVLFPKPLTWMDKLILEYTNAICHWEKNKPQCTTSSDQNCSDHSE
SIO_010081: abhd2
subclass of: SO_0000673
so part of: abhd2
location: complement(join(5702024..5702226,5714296..5714380,5720229..5720298,5723194..5723307,5726310..5726402,5736178..5736361,5748149..5748316,5749932..5750107,5766369..5766571))
location: region:5702024-5766571:-1
so has part: feature:5766369-5766571:-1:exon
so has part: feature:5749932-5750107:-1:exon
so has part: feature:5748149-5748316:-1:exon
so has part: feature:5736178-5736361:-1:exon
so has part: feature:5726310-5726402:-1:exon
so has part: feature:5723194-5723307:-1:exon
so has part: feature:5720229-5720298:-1:exon
so has part: feature:5714296-5714380:-1:exon
so has part: feature:5702024-5702226:-1:exon

XP_032906339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5766369-5766571:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5749932-5750107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5748149-5748316:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5736178-5736361:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5726310-5726402:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5723194-5723307:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5720229-5720298:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5714296-5714380:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5702024-5702226:-1:exon

abhd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: abhd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monoacylglycerol lipase ABHD2
translation: MADSESVRIAPEMPAMFDGMKLAAVAAVLYIIVRCLNLKSPTASPELTFQDTPLTRFLLKSCPLLTKEYIPPLIWGKSGHVQTALYGKMGRVSSPHPYGLRKYLPMPDGATATWDLFEPMAEHNTGEDITMVICPGIANHSEKQYIRTFVDYAQRNGYRCAVLNHLGALPNIELTSPRMFTYGCTWEFGAMVNNIKKAFPQTQLVVVGFSLGGNIVCKFLGEDQVNQENVLCCISVCQGYSALRAQETFLQWDQCRRFYNFLMADNMKKIILFHRKILFGENGCKSPNALVDVDLSKLYTATSLMHIDDNIMRKFHGYDTLKEYYEQESCMHYLHNIQIPLLLVNAQDDPLVHESLLTIPRSLAEKKENVMFVLTLHGGHLGFFEGAVLFPKPLTWMDKLILEYTNAICHWEKNKPQCTTSSDQNCSDHSE
SIO_010081: abhd2
subclass of: SO_0000673
so part of: abhd2
location: complement(join(5702024..5702226,5714296..5714380,5720229..5720298,5723194..5723307,5726310..5726402,5736178..5736361,5748149..5748316,5749932..5750107,5766369..5766571))
location: region:5702024-5766571:-1
so has part: feature:5766369-5766571:-1:exon
so has part: feature:5749932-5750107:-1:exon
so has part: feature:5748149-5748316:-1:exon
so has part: feature:5736178-5736361:-1:exon
so has part: feature:5726310-5726402:-1:exon
so has part: feature:5723194-5723307:-1:exon
so has part: feature:5720229-5720298:-1:exon
so has part: feature:5714296-5714380:-1:exon
so has part: feature:5702024-5702226:-1:exon

XP_032906340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5766369-5766571:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5749932-5750107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5748149-5748316:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5736178-5736361:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5726310-5726402:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5723194-5723307:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5720229-5720298:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5714296-5714380:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5702024-5702226:-1:exon

mfge8
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: mfge8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5857868..5942788
location: region:5857868-5942788:1
so has part: feature:5857868-5942788:1:exon
subclass of: SO_0000010

116991702
type: Gene
SIO_000068: ncbigene

position:5857868:1
position: 5857868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5942788:1
position: 5942788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5857868-5942788:1:exon

mfge8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: mfge8
product: milk fat globule EGF and factor V/VIII domain containing, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033050542.1
SIO_010081: mfge8
subclass of: SO_0000673
so part of: mfge8
location: join(5857868..5858160,5887071..5887199,5893160..5893240,5894973..5895098,5915070..5915183,5921654..5921835,5927155..5927310,5931196..5931340,5934625..5934827,5939032..5939187,5941725..5942788)
location: region:5857868-5942788:1
so has part: feature:5857868-5858160:1:exon
so has part: feature:5887071-5887199:1:exon
so has part: feature:5893160-5893240:1:exon
so has part: feature:5894973-5895098:1:exon
so has part: feature:5915070-5915183:1:exon
so has part: feature:5921654-5921835:1:exon
so has part: feature:5927155-5927310:1:exon
so has part: feature:5931196-5931340:1:exon
so has part: feature:5934625-5934827:1:exon
so has part: feature:5939032-5939187:1:exon
so has part: feature:5941725-5942788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5857868-5858160:1:exon

position:5858160:1
position: 5858160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5887071-5887199:1:exon

position:5887071:1
position: 5887071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5887199:1
position: 5887199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5893160-5893240:1:exon

position:5893160:1
position: 5893160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5893240:1
position: 5893240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5894973-5895098:1:exon

position:5894973:1
position: 5894973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5895098:1
position: 5895098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5915070-5915183:1:exon

position:5915070:1
position: 5915070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5915183:1
position: 5915183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5921654-5921835:1:exon

position:5921654:1
position: 5921654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5921835:1
position: 5921835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5927155-5927310:1:exon

position:5927155:1
position: 5927155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5927310:1
position: 5927310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5931196-5931340:1:exon

position:5931196:1
position: 5931196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5931340:1
position: 5931340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5934625-5934827:1:exon

position:5934625:1
position: 5934625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5934827:1
position: 5934827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5939032-5939187:1:exon

position:5939032:1
position: 5939032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5939187:1
position: 5939187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5941725-5942788:1:exon

position:5941725:1
position: 5941725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mfge8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: mfge8
product: milk fat globule EGF and factor V/VIII domain containing, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033050543.1
SIO_010081: mfge8
subclass of: SO_0000673
so part of: mfge8
location: join(5857868..5858160,5887071..5887199,5893160..5893240,5894973..5895098,5915070..5915183,5921654..5921835,5927155..5927310,5931196..5931340,5934643..5934827,5939032..5939187,5941725..5942788)
location: region:5857868-5942788:1
so has part: feature:5857868-5858160:1:exon
so has part: feature:5887071-5887199:1:exon
so has part: feature:5893160-5893240:1:exon
so has part: feature:5894973-5895098:1:exon
so has part: feature:5915070-5915183:1:exon
so has part: feature:5921654-5921835:1:exon
so has part: feature:5927155-5927310:1:exon
so has part: feature:5931196-5931340:1:exon
so has part: feature:5934643-5934827:1:exon
so has part: feature:5939032-5939187:1:exon
so has part: feature:5941725-5942788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5857868-5858160:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5887071-5887199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5893160-5893240:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5894973-5895098:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5915070-5915183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5921654-5921835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5927155-5927310:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5931196-5931340:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5934643-5934827:1:exon

position:5934643:1
position: 5934643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5939032-5939187:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5941725-5942788:1:exon

mfge8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: mfge8
product: milk fat globule EGF and factor V/VIII domain containing, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033050545.1
SIO_010081: mfge8
subclass of: SO_0000673
so part of: mfge8
location: join(5857872..5858160,5887071..5887199,5894973..5895098,5915070..5915183,5921654..5921835,5927155..5927310,5931196..5931340,5934643..5934827,5939032..5939187,5941725..5942788)
location: region:5857872-5942788:1
so has part: feature:5857872-5858160:1:exon
so has part: feature:5887071-5887199:1:exon
so has part: feature:5894973-5895098:1:exon
so has part: feature:5915070-5915183:1:exon
so has part: feature:5921654-5921835:1:exon
so has part: feature:5927155-5927310:1:exon
so has part: feature:5931196-5931340:1:exon
so has part: feature:5934643-5934827:1:exon
so has part: feature:5939032-5939187:1:exon
so has part: feature:5941725-5942788:1:exon

position:5857872:1
position: 5857872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5857872-5858160:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5887071-5887199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5894973-5895098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5915070-5915183:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5921654-5921835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5927155-5927310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5931196-5931340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5934643-5934827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5939032-5939187:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5941725-5942788:1:exon

mfge8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: mfge8
product: milk fat globule EGF and factor V/VIII domain containing, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033050544.1
SIO_010081: mfge8
subclass of: SO_0000673
so part of: mfge8
location: join(5857873..5858160,5887071..5887199,5894973..5895098,5915070..5915183,5921654..5921835,5927155..5927310,5931196..5931340,5934625..5934827,5939032..5939187,5941725..5942788)
location: region:5857873-5942788:1
so has part: feature:5857873-5858160:1:exon
so has part: feature:5887071-5887199:1:exon
so has part: feature:5894973-5895098:1:exon
so has part: feature:5915070-5915183:1:exon
so has part: feature:5921654-5921835:1:exon
so has part: feature:5927155-5927310:1:exon
so has part: feature:5931196-5931340:1:exon
so has part: feature:5934625-5934827:1:exon
so has part: feature:5939032-5939187:1:exon
so has part: feature:5941725-5942788:1:exon

position:5857873:1
position: 5857873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5857873-5858160:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5887071-5887199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5894973-5895098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5915070-5915183:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5921654-5921835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5927155-5927310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5931196-5931340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5934625-5934827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5939032-5939187:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5941725-5942788:1:exon

mfge8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: mfge8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lactadherin isoform X1
translation: MMNPGIFFFISVTLARASTEEHPCKPNPCQNGGSCLAGISSDPYYCICMDGFTGKVCAEVEQGSGAEEPTVYTLEDIRYNDVTTYSRLSGPCSPNPCQNGGLCESISRRGDAFSEYICKCPTGFQGVHCQTNINDCASQPCKHGGKCVDLDADYSCNCPSPYIGRTCHHTCVSALGMEGGAIEDHQISASSVHLGFLGLKRWRAELARLNNKGIVNAWSMATFDHNPWFQVNLLRKMRITGIITQGALAVGAPEYVKVFKVAYSSDGVNFTVFKDSEKNKDKTFTGNRNNNGQKKNLVAPPIIAQYIRLIPVVCQRACTLRMELIGCELNVYLNTTGCSESLGMKSRYIGDKQISASSTYKMWGIDAFTWAPCLARLDKHGKTNAWTAEISNKSQWLQINLLVPKEITGIITQGAKDFGVHQYVESFKIAYSDDGKSWTIYKDNITRKDKVFQGNYDNYSHRRNIFDPPFYAQFVRIVPQTWHERITLRVELLGCHD
SIO_010081: mfge8
subclass of: SO_0000673
so part of: mfge8
location: join(5858103..5858160,5887071..5887199,5893160..5893240,5894973..5895098,5915070..5915183,5921654..5921835,5927155..5927310,5931196..5931340,5934625..5934827,5939032..5939187,5941725..5941868)
location: region:5858103-5941868:1
so has part: feature:5858103-5858160:1:exon
so has part: feature:5887071-5887199:1:exon
so has part: feature:5893160-5893240:1:exon
so has part: feature:5894973-5895098:1:exon
so has part: feature:5915070-5915183:1:exon
so has part: feature:5921654-5921835:1:exon
so has part: feature:5927155-5927310:1:exon
so has part: feature:5931196-5931340:1:exon
so has part: feature:5934625-5934827:1:exon
so has part: feature:5939032-5939187:1:exon
so has part: feature:5941725-5941868:1:exon

XP_032906433.1
type: Protein
SIO_000068: ncbiprotein

position:5858103:1
position: 5858103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5941868:1
position: 5941868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5858103-5858160:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5887071-5887199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5893160-5893240:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5894973-5895098:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5915070-5915183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5921654-5921835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5927155-5927310:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5931196-5931340:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5934625-5934827:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5939032-5939187:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5941725-5941868:1:exon

mfge8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: mfge8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lactadherin isoform X2
translation: MMNPGIFFFISVTLARASTEEHPCKPNPCQNGGSCLAGISSDPYYCICMDGFTGKVCAEVEQGSGAEEPTVYTLEDIRYNDVTTYSRLSGPCSPNPCQNGGLCESISRRGDAFSEYICKCPTGFQGVHCQTNINDCASQPCKHGGKCVDLDADYSCNCPSPYIGRTCHHTCVSALGMEGGAIEDHQISASSVHLGFLGLKRWRAELARLNNKGIVNAWSMATFDHNPWFQVNLLRKMRITGIITQGALAVGAPEYVKVFKVAYSSDGVNFTVFKDSEKNKDKTFTGNRNNNGQKKNLVAPPIIAQYIRLIPVVCQRACTLRMELIGCELNGCSESLGMKSRYIGDKQISASSTYKMWGIDAFTWAPCLARLDKHGKTNAWTAEISNKSQWLQINLLVPKEITGIITQGAKDFGVHQYVESFKIAYSDDGKSWTIYKDNITRKDKVFQGNYDNYSHRRNIFDPPFYAQFVRIVPQTWHERITLRVELLGCHD
SIO_010081: mfge8
subclass of: SO_0000673
so part of: mfge8
location: join(5858103..5858160,5887071..5887199,5893160..5893240,5894973..5895098,5915070..5915183,5921654..5921835,5927155..5927310,5931196..5931340,5934643..5934827,5939032..5939187,5941725..5941868)
location: region:5858103-5941868:1
so has part: feature:5858103-5858160:1:exon
so has part: feature:5887071-5887199:1:exon
so has part: feature:5893160-5893240:1:exon
so has part: feature:5894973-5895098:1:exon
so has part: feature:5915070-5915183:1:exon
so has part: feature:5921654-5921835:1:exon
so has part: feature:5927155-5927310:1:exon
so has part: feature:5931196-5931340:1:exon
so has part: feature:5934643-5934827:1:exon
so has part: feature:5939032-5939187:1:exon
so has part: feature:5941725-5941868:1:exon

XP_032906434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5858103-5858160:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5887071-5887199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5893160-5893240:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5894973-5895098:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5915070-5915183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5921654-5921835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5927155-5927310:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5931196-5931340:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5934643-5934827:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5939032-5939187:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5941725-5941868:1:exon

mfge8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: mfge8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lactadherin isoform X3
translation: MMNPGIFFFISVTLARASTEEHPCKPNPCQNGGSCLAGISSDPYYCICMDGFTGKVCAEVEQGPCSPNPCQNGGLCESISRRGDAFSEYICKCPTGFQGVHCQTNINDCASQPCKHGGKCVDLDADYSCNCPSPYIGRTCHHTCVSALGMEGGAIEDHQISASSVHLGFLGLKRWRAELARLNNKGIVNAWSMATFDHNPWFQVNLLRKMRITGIITQGALAVGAPEYVKVFKVAYSSDGVNFTVFKDSEKNKDKTFTGNRNNNGQKKNLVAPPIIAQYIRLIPVVCQRACTLRMELIGCELNVYLNTTGCSESLGMKSRYIGDKQISASSTYKMWGIDAFTWAPCLARLDKHGKTNAWTAEISNKSQWLQINLLVPKEITGIITQGAKDFGVHQYVESFKIAYSDDGKSWTIYKDNITRKDKVFQGNYDNYSHRRNIFDPPFYAQFVRIVPQTWHERITLRVELLGCHD
SIO_010081: mfge8
subclass of: SO_0000673
so part of: mfge8
location: join(5858103..5858160,5887071..5887199,5894973..5895098,5915070..5915183,5921654..5921835,5927155..5927310,5931196..5931340,5934625..5934827,5939032..5939187,5941725..5941868)
location: region:5858103-5941868:1
so has part: feature:5858103-5858160:1:exon
so has part: feature:5887071-5887199:1:exon
so has part: feature:5894973-5895098:1:exon
so has part: feature:5915070-5915183:1:exon
so has part: feature:5921654-5921835:1:exon
so has part: feature:5927155-5927310:1:exon
so has part: feature:5931196-5931340:1:exon
so has part: feature:5934625-5934827:1:exon
so has part: feature:5939032-5939187:1:exon
so has part: feature:5941725-5941868:1:exon

XP_032906435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5858103-5858160:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5887071-5887199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5894973-5895098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5915070-5915183:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5921654-5921835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5927155-5927310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5931196-5931340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5934625-5934827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5939032-5939187:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5941725-5941868:1:exon

mfge8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: mfge8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lactadherin isoform X4
translation: MMNPGIFFFISVTLARASTEEHPCKPNPCQNGGSCLAGISSDPYYCICMDGFTGKVCAEVEQGPCSPNPCQNGGLCESISRRGDAFSEYICKCPTGFQGVHCQTNINDCASQPCKHGGKCVDLDADYSCNCPSPYIGRTCHHTCVSALGMEGGAIEDHQISASSVHLGFLGLKRWRAELARLNNKGIVNAWSMATFDHNPWFQVNLLRKMRITGIITQGALAVGAPEYVKVFKVAYSSDGVNFTVFKDSEKNKDKTFTGNRNNNGQKKNLVAPPIIAQYIRLIPVVCQRACTLRMELIGCELNGCSESLGMKSRYIGDKQISASSTYKMWGIDAFTWAPCLARLDKHGKTNAWTAEISNKSQWLQINLLVPKEITGIITQGAKDFGVHQYVESFKIAYSDDGKSWTIYKDNITRKDKVFQGNYDNYSHRRNIFDPPFYAQFVRIVPQTWHERITLRVELLGCHD
SIO_010081: mfge8
subclass of: SO_0000673
so part of: mfge8
location: join(5858103..5858160,5887071..5887199,5894973..5895098,5915070..5915183,5921654..5921835,5927155..5927310,5931196..5931340,5934643..5934827,5939032..5939187,5941725..5941868)
location: region:5858103-5941868:1
so has part: feature:5858103-5858160:1:exon
so has part: feature:5887071-5887199:1:exon
so has part: feature:5894973-5895098:1:exon
so has part: feature:5915070-5915183:1:exon
so has part: feature:5921654-5921835:1:exon
so has part: feature:5927155-5927310:1:exon
so has part: feature:5931196-5931340:1:exon
so has part: feature:5934643-5934827:1:exon
so has part: feature:5939032-5939187:1:exon
so has part: feature:5941725-5941868:1:exon

XP_032906436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5858103-5858160:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5887071-5887199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5894973-5895098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5915070-5915183:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5921654-5921835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5927155-5927310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5931196-5931340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5934643-5934827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5939032-5939187:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5941725-5941868:1:exon

hapln3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: hapln3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5966350..5988403
location: region:5966350-5988403:1
so has part: feature:5966350-5988403:1:exon
subclass of: SO_0000010

116991726
type: Gene
SIO_000068: ncbigene

position:5966350:1
position: 5966350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5988403:1
position: 5988403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5966350-5988403:1:exon

hapln3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hapln3
product: hyaluronan and proteoglycan link protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033050613.1
SIO_010081: hapln3
subclass of: SO_0000673
so part of: hapln3
location: join(5966350..5966522,5980546..5980702,5982275..5982640,5984139..5984441,5985863..5986208)
location: region:5966350-5986208:1
so has part: feature:5966350-5966522:1:exon
so has part: feature:5980546-5980702:1:exon
so has part: feature:5982275-5982640:1:exon
so has part: feature:5984139-5984441:1:exon
so has part: feature:5985863-5986208:1:exon

position:5986208:1
position: 5986208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5966350-5966522:1:exon

position:5966522:1
position: 5966522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5980546-5980702:1:exon

position:5980546:1
position: 5980546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5980702:1
position: 5980702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5982275-5982640:1:exon

position:5982275:1
position: 5982275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5982640:1
position: 5982640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5984139-5984441:1:exon

position:5984139:1
position: 5984139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5984441:1
position: 5984441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5985863-5986208:1:exon

position:5985863:1
position: 5985863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hapln3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hapln3
product: hyaluronan and proteoglycan link protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033050614.1
SIO_010081: hapln3
subclass of: SO_0000673
so part of: hapln3
location: join(5966540..5966679,5980546..5980702,5982275..5982640,5984139..5984441,5985863..5986038,5988033..5988403)
location: region:5966540-5988403:1
so has part: feature:5966540-5966679:1:exon
so has part: feature:5980546-5980702:1:exon
so has part: feature:5982275-5982640:1:exon
so has part: feature:5984139-5984441:1:exon
so has part: feature:5985863-5986038:1:exon
so has part: feature:5988033-5988403:1:exon

position:5966540:1
position: 5966540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5966540-5966679:1:exon

position:5966679:1
position: 5966679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5980546-5980702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5982275-5982640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5984139-5984441:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5985863-5986038:1:exon

position:5986038:1
position: 5986038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5988033-5988403:1:exon

position:5988033:1
position: 5988033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hapln3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hapln3
product: hyaluronan and proteoglycan link protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033050611.1
SIO_010081: hapln3
subclass of: SO_0000673
so part of: hapln3
location: join(5966540..5966679,5980546..5980702,5982275..5982640,5984139..5984441,5985863..5986208)
location: region:5966540-5986208:1
so has part: feature:5966540-5966679:1:exon
so has part: feature:5980546-5980702:1:exon
so has part: feature:5982275-5982640:1:exon
so has part: feature:5984139-5984441:1:exon
so has part: feature:5985863-5986208:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5966540-5966679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5980546-5980702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5982275-5982640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5984139-5984441:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5985863-5986208:1:exon

hapln3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hapln3
product: hyaluronan and proteoglycan link protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033050612.1
SIO_010081: hapln3
subclass of: SO_0000673
so part of: hapln3
location: join(5974040..5974079,5980546..5980702,5982275..5982640,5984139..5984441,5985863..5986208)
location: region:5974040-5986208:1
so has part: feature:5974040-5974079:1:exon
so has part: feature:5980546-5980702:1:exon
so has part: feature:5982275-5982640:1:exon
so has part: feature:5984139-5984441:1:exon
so has part: feature:5985863-5986208:1:exon

position:5974040:1
position: 5974040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5974040-5974079:1:exon

position:5974079:1
position: 5974079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5980546-5980702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5982275-5982640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5984139-5984441:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5985863-5986208:1:exon

hapln3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hapln3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 3 isoform X2
translation: MMLVLALVLLLQLACLALGLPQNGAFYINGNSNGNGHGNGEYYNGVKLHIEAQEERLFAYRGENVTLSCRYRYEPPANGSRKVRVKWSKLNMDFTKESDVMVAIGLRHRSFGEFKERVYLQQAQERDVSLVITDVRLEDYGKYKCEVIDGLEDESAIVELELRGVVFPYQPHHGRYQLNFHDAKQACEGQDAMIASFEQLFQAWEEGLDWCNAGWLGDGSVQYPITAPRGPCGGKDNSAGVRNYGQRHKHLHRYDVFCFASTLKGQVYFRRHPLKYNYEEAGRACQDDGGEIAKVGQLYAAWKFLKFDRCEAGWVADGSVRYSRVS
SIO_010081: hapln3
subclass of: SO_0000673
so part of: hapln3
location: join(5980579..5980702,5982275..5982640,5984139..5984441,5985863..5986038,5988033..5988044)
location: region:5980579-5988044:1
so has part: feature:5980579-5980702:1:exon
so has part: feature:5982275-5982640:1:exon
so has part: feature:5984139-5984441:1:exon
so has part: feature:5985863-5986038:1:exon
so has part: feature:5988033-5988044:1:exon

XP_032906505.1
type: Protein
SIO_000068: ncbiprotein

position:5980579:1
position: 5980579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5988044:1
position: 5988044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5980579-5980702:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5982275-5982640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5984139-5984441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5985863-5986038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5988033-5988044:1:exon

hapln3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hapln3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 3 isoform X1
translation: MMLVLALVLLLQLACLALGLPQNGAFYINGNSNGNGHGNGEYYNGVKLHIEAQEERLFAYRGENVTLSCRYRYEPPANGSRKVRVKWSKLNMDFTKESDVMVAIGLRHRSFGEFKERVYLQQAQERDVSLVITDVRLEDYGKYKCEVIDGLEDESAIVELELRGVVFPYQPHHGRYQLNFHDAKQACEGQDAMIASFEQLFQAWEEGLDWCNAGWLGDGSVQYPITAPRGPCGGKDNSAGVRNYGQRHKHLHRYDVFCFASTLKGQVYFRRHPLKYNYEEAGRACQDDGGEIAKVGQLYAAWKFLKFDRCEAGWVADGSVRYSVVFPRPKCGPPEPGVRTFGFPRKEMKKFGVYCFKMN
SIO_010081: hapln3
subclass of: SO_0000673
so part of: hapln3
location: join(5980579..5980702,5982275..5982640,5984139..5984441,5985863..5986149)
location: region:5980579-5986149:1
so has part: feature:5980579-5980702:1:exon
so has part: feature:5982275-5982640:1:exon
so has part: feature:5984139-5984441:1:exon
so has part: feature:5985863-5986149:1:exon

XP_032906502.1
type: Protein
SIO_000068: ncbiprotein

position:5986149:1
position: 5986149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5980579-5980702:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5982275-5982640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5984139-5984441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5985863-5986149:1:exon

hapln3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hapln3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 3 isoform X1
translation: MMLVLALVLLLQLACLALGLPQNGAFYINGNSNGNGHGNGEYYNGVKLHIEAQEERLFAYRGENVTLSCRYRYEPPANGSRKVRVKWSKLNMDFTKESDVMVAIGLRHRSFGEFKERVYLQQAQERDVSLVITDVRLEDYGKYKCEVIDGLEDESAIVELELRGVVFPYQPHHGRYQLNFHDAKQACEGQDAMIASFEQLFQAWEEGLDWCNAGWLGDGSVQYPITAPRGPCGGKDNSAGVRNYGQRHKHLHRYDVFCFASTLKGQVYFRRHPLKYNYEEAGRACQDDGGEIAKVGQLYAAWKFLKFDRCEAGWVADGSVRYSVVFPRPKCGPPEPGVRTFGFPRKEMKKFGVYCFKMN
SIO_010081: hapln3
subclass of: SO_0000673
so part of: hapln3
location: join(5980579..5980702,5982275..5982640,5984139..5984441,5985863..5986149)
location: region:5980579-5986149:1
so has part: feature:5980579-5980702:1:exon
so has part: feature:5982275-5982640:1:exon
so has part: feature:5984139-5984441:1:exon
so has part: feature:5985863-5986149:1:exon

XP_032906503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5980579-5980702:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5982275-5982640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5984139-5984441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5985863-5986149:1:exon

hapln3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hapln3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 3 isoform X1
translation: MMLVLALVLLLQLACLALGLPQNGAFYINGNSNGNGHGNGEYYNGVKLHIEAQEERLFAYRGENVTLSCRYRYEPPANGSRKVRVKWSKLNMDFTKESDVMVAIGLRHRSFGEFKERVYLQQAQERDVSLVITDVRLEDYGKYKCEVIDGLEDESAIVELELRGVVFPYQPHHGRYQLNFHDAKQACEGQDAMIASFEQLFQAWEEGLDWCNAGWLGDGSVQYPITAPRGPCGGKDNSAGVRNYGQRHKHLHRYDVFCFASTLKGQVYFRRHPLKYNYEEAGRACQDDGGEIAKVGQLYAAWKFLKFDRCEAGWVADGSVRYSVVFPRPKCGPPEPGVRTFGFPRKEMKKFGVYCFKMN
SIO_010081: hapln3
subclass of: SO_0000673
so part of: hapln3
location: join(5980579..5980702,5982275..5982640,5984139..5984441,5985863..5986149)
location: region:5980579-5986149:1
so has part: feature:5980579-5980702:1:exon
so has part: feature:5982275-5982640:1:exon
so has part: feature:5984139-5984441:1:exon
so has part: feature:5985863-5986149:1:exon

XP_032906504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5980579-5980702:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5982275-5982640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5984139-5984441:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5985863-5986149:1:exon

acan
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: acan
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6004561..6104617)
location: region:6004561-6104617:-1
so has part: feature:6004561-6104617:-1:exon
subclass of: SO_0000010

116991669
type: Gene
SIO_000068: ncbigene

position:6004561:-1
position: 6004561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6104617:-1
position: 6104617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6004561-6104617:-1:exon

acan
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: acan
product: aggrecan, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033050486.1
SIO_010081: acan
subclass of: SO_0000673
so part of: acan
location: complement(join(6004561..6005719,6007485..6007667,6011042..6011186,6012466..6012548,6013736..6013894,6022790..6022903,6025245..6025358,6032428..6033982,6034100..6034335,6034756..6034884,6038775..6039134,6043549..6043842,6046839..6046966,6051816..6051990,6053133..6053717,6055926..6056219,6059231..6059358,6061562..6061736,6062685..6063071,6067974..6068050,6104251..6104617))
location: region:6004561-6104617:-1
so has part: feature:6104251-6104617:-1:exon
so has part: feature:6067974-6068050:-1:exon
so has part: feature:6062685-6063071:-1:exon
so has part: feature:6061562-6061736:-1:exon
so has part: feature:6059231-6059358:-1:exon
so has part: feature:6055926-6056219:-1:exon
so has part: feature:6053133-6053717:-1:exon
so has part: feature:6051816-6051990:-1:exon
so has part: feature:6046839-6046966:-1:exon
so has part: feature:6043549-6043842:-1:exon
so has part: feature:6038775-6039134:-1:exon
so has part: feature:6034756-6034884:-1:exon
so has part: feature:6034100-6034335:-1:exon
so has part: feature:6032428-6033982:-1:exon
so has part: feature:6025245-6025358:-1:exon
so has part: feature:6022790-6022903:-1:exon
so has part: feature:6013736-6013894:-1:exon
so has part: feature:6012466-6012548:-1:exon
so has part: feature:6011042-6011186:-1:exon
so has part: feature:6007485-6007667:-1:exon
so has part: feature:6004561-6005719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6104251-6104617:-1:exon

position:6104251:-1
position: 6104251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6067974-6068050:-1:exon

position:6067974:-1
position: 6067974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6068050:-1
position: 6068050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6062685-6063071:-1:exon

position:6062685:-1
position: 6062685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6063071:-1
position: 6063071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6061562-6061736:-1:exon

position:6061562:-1
position: 6061562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6061736:-1
position: 6061736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6059231-6059358:-1:exon

position:6059231:-1
position: 6059231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6059358:-1
position: 6059358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6055926-6056219:-1:exon

position:6055926:-1
position: 6055926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6056219:-1
position: 6056219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6053133-6053717:-1:exon

position:6053133:-1
position: 6053133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6053717:-1
position: 6053717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6051816-6051990:-1:exon

position:6051816:-1
position: 6051816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6051990:-1
position: 6051990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6046839-6046966:-1:exon

position:6046839:-1
position: 6046839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6046966:-1
position: 6046966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6043549-6043842:-1:exon

position:6043549:-1
position: 6043549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6043842:-1
position: 6043842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6038775-6039134:-1:exon

position:6038775:-1
position: 6038775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6039134:-1
position: 6039134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6034756-6034884:-1:exon

position:6034756:-1
position: 6034756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6034884:-1
position: 6034884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6034100-6034335:-1:exon

position:6034100:-1
position: 6034100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6034335:-1
position: 6034335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6032428-6033982:-1:exon

position:6032428:-1
position: 6032428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6033982:-1
position: 6033982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6025245-6025358:-1:exon

position:6025245:-1
position: 6025245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6025358:-1
position: 6025358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6022790-6022903:-1:exon

position:6022790:-1
position: 6022790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6022903:-1
position: 6022903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6013736-6013894:-1:exon

position:6013736:-1
position: 6013736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6013894:-1
position: 6013894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6012466-6012548:-1:exon

position:6012466:-1
position: 6012466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6012548:-1
position: 6012548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6011042-6011186:-1:exon

position:6011042:-1
position: 6011042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6011186:-1
position: 6011186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6007485-6007667:-1:exon

position:6007485:-1
position: 6007485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6007667:-1
position: 6007667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6004561-6005719:-1:exon

position:6005719:-1
position: 6005719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

acan
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: acan
product: aggrecan, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033050484.1
SIO_010081: acan
subclass of: SO_0000673
so part of: acan
location: complement(join(6004561..6005719,6007485..6007667,6011042..6011186,6012466..6012548,6013736..6013894,6022790..6022903,6025245..6025358,6032428..6034012,6034100..6034335,6034756..6034884,6038775..6039134,6043549..6043842,6046839..6046966,6051816..6051990,6053133..6053717,6055926..6056219,6059231..6059358,6061562..6061736,6062685..6063071,6067974..6068050,6104251..6104617))
location: region:6004561-6104617:-1
so has part: feature:6104251-6104617:-1:exon
so has part: feature:6067974-6068050:-1:exon
so has part: feature:6062685-6063071:-1:exon
so has part: feature:6061562-6061736:-1:exon
so has part: feature:6059231-6059358:-1:exon
so has part: feature:6055926-6056219:-1:exon
so has part: feature:6053133-6053717:-1:exon
so has part: feature:6051816-6051990:-1:exon
so has part: feature:6046839-6046966:-1:exon
so has part: feature:6043549-6043842:-1:exon
so has part: feature:6038775-6039134:-1:exon
so has part: feature:6034756-6034884:-1:exon
so has part: feature:6034100-6034335:-1:exon
so has part: feature:6032428-6034012:-1:exon
so has part: feature:6025245-6025358:-1:exon
so has part: feature:6022790-6022903:-1:exon
so has part: feature:6013736-6013894:-1:exon
so has part: feature:6012466-6012548:-1:exon
so has part: feature:6011042-6011186:-1:exon
so has part: feature:6007485-6007667:-1:exon
so has part: feature:6004561-6005719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6104251-6104617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6067974-6068050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6062685-6063071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6061562-6061736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6059231-6059358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6055926-6056219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6053133-6053717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6051816-6051990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6046839-6046966:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6043549-6043842:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6038775-6039134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6034756-6034884:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6034100-6034335:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6032428-6034012:-1:exon

position:6034012:-1
position: 6034012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6025245-6025358:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6022790-6022903:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6013736-6013894:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6012466-6012548:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6011042-6011186:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6007485-6007667:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6004561-6005719:-1:exon

acan
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: acan
product: aggrecan, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033050483.1
SIO_010081: acan
subclass of: SO_0000673
so part of: acan
location: complement(join(6004561..6005719,6007485..6007667,6011042..6011186,6012466..6012548,6013736..6013894,6022790..6022903,6025245..6025358,6032428..6034335,6034756..6034884,6038775..6039134,6043549..6043842,6046839..6046966,6051816..6051990,6053133..6053717,6055926..6056219,6059231..6059358,6061562..6061736,6062685..6063071,6067974..6068050,6104251..6104617))
location: region:6004561-6104617:-1
so has part: feature:6104251-6104617:-1:exon
so has part: feature:6067974-6068050:-1:exon
so has part: feature:6062685-6063071:-1:exon
so has part: feature:6061562-6061736:-1:exon
so has part: feature:6059231-6059358:-1:exon
so has part: feature:6055926-6056219:-1:exon
so has part: feature:6053133-6053717:-1:exon
so has part: feature:6051816-6051990:-1:exon
so has part: feature:6046839-6046966:-1:exon
so has part: feature:6043549-6043842:-1:exon
so has part: feature:6038775-6039134:-1:exon
so has part: feature:6034756-6034884:-1:exon
so has part: feature:6032428-6034335:-1:exon
so has part: feature:6025245-6025358:-1:exon
so has part: feature:6022790-6022903:-1:exon
so has part: feature:6013736-6013894:-1:exon
so has part: feature:6012466-6012548:-1:exon
so has part: feature:6011042-6011186:-1:exon
so has part: feature:6007485-6007667:-1:exon
so has part: feature:6004561-6005719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6104251-6104617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6067974-6068050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6062685-6063071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6061562-6061736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6059231-6059358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6055926-6056219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6053133-6053717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6051816-6051990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6046839-6046966:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6043549-6043842:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6038775-6039134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6034756-6034884:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6032428-6034335:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6025245-6025358:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6022790-6022903:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6013736-6013894:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6012466-6012548:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6011042-6011186:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6007485-6007667:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6004561-6005719:-1:exon

acan
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: acan
product: aggrecan, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033050485.1
SIO_010081: acan
subclass of: SO_0000673
so part of: acan
location: complement(join(6004561..6005719,6007485..6007667,6011042..6011186,6012466..6012548,6013736..6013894,6025245..6025358,6032428..6034335,6034756..6034884,6038775..6039134,6043549..6043842,6046839..6046966,6051816..6051990,6053133..6053717,6055926..6056219,6059231..6059358,6061562..6061736,6062685..6063071,6067974..6068050,6104251..6104615))
location: region:6004561-6104615:-1
so has part: feature:6104251-6104615:-1:exon
so has part: feature:6067974-6068050:-1:exon
so has part: feature:6062685-6063071:-1:exon
so has part: feature:6061562-6061736:-1:exon
so has part: feature:6059231-6059358:-1:exon
so has part: feature:6055926-6056219:-1:exon
so has part: feature:6053133-6053717:-1:exon
so has part: feature:6051816-6051990:-1:exon
so has part: feature:6046839-6046966:-1:exon
so has part: feature:6043549-6043842:-1:exon
so has part: feature:6038775-6039134:-1:exon
so has part: feature:6034756-6034884:-1:exon
so has part: feature:6032428-6034335:-1:exon
so has part: feature:6025245-6025358:-1:exon
so has part: feature:6013736-6013894:-1:exon
so has part: feature:6012466-6012548:-1:exon
so has part: feature:6011042-6011186:-1:exon
so has part: feature:6007485-6007667:-1:exon
so has part: feature:6004561-6005719:-1:exon

position:6104615:-1
position: 6104615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6104251-6104615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6067974-6068050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6062685-6063071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6061562-6061736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6059231-6059358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6055926-6056219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6053133-6053717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6051816-6051990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6046839-6046966:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6043549-6043842:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6038775-6039134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6034756-6034884:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6032428-6034335:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6025245-6025358:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6013736-6013894:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6012466-6012548:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6011042-6011186:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6007485-6007667:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6004561-6005719:-1:exon

acan
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: acan
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aggrecan core protein isoform X4
translation: MTTLLLVFVCLRVIAAAISVEVSDNAKALSVKIASQSPLNAVLASSVAFPCYFLTSAPLSADSPLASLLEPRIKWTKIAKGGKETVIVVATSGKVKISQEYKGRVKLPSYLDIPNDATLELDKVLSSDSGMYRCEVMHGIEDSQDVVELVVKGIIFHYRAISSRYTLNFYKAQQACVDNTATIATPDQLQAAYDDGYDQCDAGWMADQTVRYPIHDPREGCYGNLDEYPGVRSYGIRDTNETYDVYCFAKDLQGKVFYITTTERYAFKEAMEACFDKGAQLATTGQLYLAWKGGMDQCNTGWLADGSVRYPISNRRLNCGGNLLGVRTVYRFTNQTGYPDPSDRHDAYCFSGKFGVETFTDTPLVYPATEPEGAFTDEGSAFTIQTIPDKVEVFFTKTTEQKEVRGDVFTLSPFTPISLPFAEVTISPAPEEVVTEGMVLLNVSGLPEELVNATEEISSPEVSVSVVAVSVAIEDLTATAGLGVTEVPPHTPATIEELVPKATAAPDVLATRPDVLTAAPPAVETPITDELDQSVTLCPISPMAPTGVVFHYRAISSRYSLNFTEAQIACLENNAFIASPEQLQAAYKRGYNQCDAGWLSDQTVRYPMVDPRERCFGDKHGFPGVRSYGVRNPEETYDVYCYIEALNGKVFHATVADGFTYDEAVDYCVSHNAKMATTGQLYAAWKQGMDRCRAGWISDGSVRYPIQTPRPYCGNGQAGVRTIYLNVDQTGYPDPHSRYDVYCFRETVVPVVTEEPAVVKLTVPVILVEQVTWTPEVARTVRPEEAEQGRTDLFIKETAEPPTATMGLIEETIATQVAPHVAVLPPESSIAPQATEPTTGAIPDLYITTEEAGTVFPSATPTAEPGSADVTPLPEAEVSGEPSGIPDISGLPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDISEEPSGIPDVSGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDISGEPSGIPDISGEPSGIPDISGESSGILDISGEPSGIPDLRGEPSGIPDISGEPSGIPDISGEPSGIPDISGESSGILDTSGEPSGIPDISGEPSGIPDLSGEPSGIPDISGEPSGIPDVSGESSGILDISGEPSGIPDISGEFSGMPDFSGEPSGMPESSGEKLEAVDVSGEASGIWVVLITTEDQQYPTMPTEFVELGKGPIEEHIPDTSGEPSGIPEISAEASGIPDLSGEPSGLPEISGSPSGIPDISGESSGLDVMSGIPSGVPDISGESSGVPEIHEIPSGIPDTSGEPSGIPEVSGVASGAPDISGEPSGTPVVSGELDVTGKPDEVSGEPSGVSQTIFTSRIIDISKDPEEDEEPSGAPEVPAEPSVMPVPIAPGVTDSSIARQTVVETTHVEVKLPEEGQRESEEVSSVSIDSSTAEEHPETVEVLAVTPPAPVLLSTIPPQISPDTVAIVDEPTTAEVVPDPCQDSPCGQGTCVVRDGSSMCDCPVGWIGTHCEIEIDECHSSPCLNGATCMDGIDSFKCLCLPSYGGNLCEIDVEKCDVGWAKFQGHCYKHFADRQTWEEAEHQCRKHEAHLASLITPEEQAFVNSYAQDYQWVGLNDKTIEGDFRWTDSSPLLYENWRPNQPDSFFSTGEDCVVMIWHEGGQWNDVPCNYHLPYTCKKGTVACGQPPEVKHAKSFGKKKERFEINSLIRYQCKNGFLQRHFPNIKCQPNGQWEQPRIVCIDTTTYYRKPQKRVDTSRSHTQNESSASQSSAP
SIO_010081: acan
subclass of: SO_0000673
so part of: acan
location: complement(join(6005625..6005719,6007485..6007667,6011042..6011186,6012466..6012548,6013736..6013894,6022790..6022903,6025245..6025358,6032428..6033982,6034100..6034335,6034756..6034884,6038775..6039134,6043549..6043842,6046839..6046966,6051816..6051990,6053133..6053717,6055926..6056219,6059231..6059358,6061562..6061736,6062685..6063071,6067974..6068043))
location: region:6005625-6068043:-1
so has part: feature:6067974-6068043:-1:exon
so has part: feature:6062685-6063071:-1:exon
so has part: feature:6061562-6061736:-1:exon
so has part: feature:6059231-6059358:-1:exon
so has part: feature:6055926-6056219:-1:exon
so has part: feature:6053133-6053717:-1:exon
so has part: feature:6051816-6051990:-1:exon
so has part: feature:6046839-6046966:-1:exon
so has part: feature:6043549-6043842:-1:exon
so has part: feature:6038775-6039134:-1:exon
so has part: feature:6034756-6034884:-1:exon
so has part: feature:6034100-6034335:-1:exon
so has part: feature:6032428-6033982:-1:exon
so has part: feature:6025245-6025358:-1:exon
so has part: feature:6022790-6022903:-1:exon
so has part: feature:6013736-6013894:-1:exon
so has part: feature:6012466-6012548:-1:exon
so has part: feature:6011042-6011186:-1:exon
so has part: feature:6007485-6007667:-1:exon
so has part: feature:6005625-6005719:-1:exon

XP_032906377.1
type: Protein
SIO_000068: ncbiprotein

position:6005625:-1
position: 6005625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6068043:-1
position: 6068043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6067974-6068043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6062685-6063071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6061562-6061736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6059231-6059358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6055926-6056219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6053133-6053717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6051816-6051990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6046839-6046966:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6043549-6043842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6038775-6039134:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6034756-6034884:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6034100-6034335:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6032428-6033982:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6025245-6025358:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6022790-6022903:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6013736-6013894:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6012466-6012548:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6011042-6011186:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6007485-6007667:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6005625-6005719:-1:exon

acan
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: acan
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aggrecan core protein isoform X2
translation: MTTLLLVFVCLRVIAAAISVEVSDNAKALSVKIASQSPLNAVLASSVAFPCYFLTSAPLSADSPLASLLEPRIKWTKIAKGGKETVIVVATSGKVKISQEYKGRVKLPSYLDIPNDATLELDKVLSSDSGMYRCEVMHGIEDSQDVVELVVKGIIFHYRAISSRYTLNFYKAQQACVDNTATIATPDQLQAAYDDGYDQCDAGWMADQTVRYPIHDPREGCYGNLDEYPGVRSYGIRDTNETYDVYCFAKDLQGKVFYITTTERYAFKEAMEACFDKGAQLATTGQLYLAWKGGMDQCNTGWLADGSVRYPISNRRLNCGGNLLGVRTVYRFTNQTGYPDPSDRHDAYCFSGKFGVETFTDTPLVYPATEPEGAFTDEGSAFTIQTIPDKVEVFFTKTTEQKEVRGDVFTLSPFTPISLPFAEVTISPAPEEVVTEGMVLLNVSGLPEELVNATEEISSPEVSVSVVAVSVAIEDLTATAGLGVTEVPPHTPATIEELVPKATAAPDVLATRPDVLTAAPPAVETPITDELDQSVTLCPISPMAPTGVVFHYRAISSRYSLNFTEAQIACLENNAFIASPEQLQAAYKRGYNQCDAGWLSDQTVRYPMVDPRERCFGDKHGFPGVRSYGVRNPEETYDVYCYIEALNGKVFHATVADGFTYDEAVDYCVSHNAKMATTGQLYAAWKQGMDRCRAGWISDGSVRYPIQTPRPYCGNGQAGVRTIYLNVDQTGYPDPHSRYDVYCFRETVVPVVTEEPAVVKLTVPVILVEQVTWTPEVARTVRPEEAEQGRTDLFIKETAEPPTATMGLIEETIATQVAPHVAVLPPESSIAPQATEPTTGAIPDLYITTEEAGTVFPSATPTAEPGSADVTPLPEAEVSGEPSGIPDISGLPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDISEEPSGIPDVSGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDISGEPSGIPDISGEPSGIPDISGESSGILDISGEPSGIPDLRGEPSGIPDISGEPSGIPDISGEPSGIPDISGESSGILDTSGEPSGIPDISGEPSGIPDLSGEPSGIPDISGEPSGIPDVSGESSGILDISGEPSGIPDISGEFSGMPDFSGEPSGMPESSGEKLEAVDVSGEASGIWVVLITTEDQQYPTMPTEFVELGKGPIEEHIPDTSGEPSGIPEISAEASGIPDLSGEPSGLPEISGSPSGIPDISGESSGLDVMSGIPSGVPDISGESSGVPEIHEIPSGIPDTSGEPSGIPEVSGVASGAPDISGEPSGTPVVSGELDVTGKPDEVSGEPSGVSQTIFTSRIIDISKDPEEDEEPSGAPEVPAEPSVMPVPIAPGVTDSSIARQTVVETTHVEVKLPEEGQRESEEVSSVSIDSSTAEEHPETVEVLAVTPPAPVLLSTIPPQISPDTVAIVDEPTTAEVVPDPCQDSPCGQGTCVVRDGSSMCDCPVGWIGTHCEIEIDECHSSPCLNGATCMDGIDSFKCLCLPSYGGNLCEIDVEKCDVGWAKFQGHCYKHFADRQTWEEAEHQCRKHEAHLASLITPEEQAFVNSYAQDYQWVGLNDKTIEGDFRWTDSSPLLYENWRPNQPDSFFSTGEDCVVMIWHEGGQWNDVPCNYHLPYTCKKGTVACGQPPEVKHAKSFGKKKERFEINSLIRYQCKNGFLQRHFPNIKCQPNGQWEQPRIVCIDTTTYYRKPQKRVDTSRSHTQNESSASQSSAP
SIO_010081: acan
subclass of: SO_0000673
so part of: acan
location: complement(join(6005625..6005719,6007485..6007667,6011042..6011186,6012466..6012548,6013736..6013894,6022790..6022903,6025245..6025358,6032428..6034012,6034100..6034335,6034756..6034884,6038775..6039134,6043549..6043842,6046839..6046966,6051816..6051990,6053133..6053717,6055926..6056219,6059231..6059358,6061562..6061736,6062685..6063071,6067974..6068043))
location: region:6005625-6068043:-1
so has part: feature:6067974-6068043:-1:exon
so has part: feature:6062685-6063071:-1:exon
so has part: feature:6061562-6061736:-1:exon
so has part: feature:6059231-6059358:-1:exon
so has part: feature:6055926-6056219:-1:exon
so has part: feature:6053133-6053717:-1:exon
so has part: feature:6051816-6051990:-1:exon
so has part: feature:6046839-6046966:-1:exon
so has part: feature:6043549-6043842:-1:exon
so has part: feature:6038775-6039134:-1:exon
so has part: feature:6034756-6034884:-1:exon
so has part: feature:6034100-6034335:-1:exon
so has part: feature:6032428-6034012:-1:exon
so has part: feature:6025245-6025358:-1:exon
so has part: feature:6022790-6022903:-1:exon
so has part: feature:6013736-6013894:-1:exon
so has part: feature:6012466-6012548:-1:exon
so has part: feature:6011042-6011186:-1:exon
so has part: feature:6007485-6007667:-1:exon
so has part: feature:6005625-6005719:-1:exon

XP_032906375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6067974-6068043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6062685-6063071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6061562-6061736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6059231-6059358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6055926-6056219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6053133-6053717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6051816-6051990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6046839-6046966:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6043549-6043842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6038775-6039134:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6034756-6034884:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6034100-6034335:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6032428-6034012:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6025245-6025358:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6022790-6022903:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6013736-6013894:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6012466-6012548:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6011042-6011186:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6007485-6007667:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6005625-6005719:-1:exon

acan
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: acan
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aggrecan core protein isoform X3
translation: MTTLLLVFVCLRVIAAAISVEVSDNAKALSVKIASQSPLNAVLASSVAFPCYFLTSAPLSADSPLASLLEPRIKWTKIAKGGKETVIVVATSGKVKISQEYKGRVKLPSYLDIPNDATLELDKVLSSDSGMYRCEVMHGIEDSQDVVELVVKGIIFHYRAISSRYTLNFYKAQQACVDNTATIATPDQLQAAYDDGYDQCDAGWMADQTVRYPIHDPREGCYGNLDEYPGVRSYGIRDTNETYDVYCFAKDLQGKVFYITTTERYAFKEAMEACFDKGAQLATTGQLYLAWKGGMDQCNTGWLADGSVRYPISNRRLNCGGNLLGVRTVYRFTNQTGYPDPSDRHDAYCFSGKFGVETFTDTPLVYPATEPEGAFTDEGSAFTIQTIPDKVEVFFTKTTEQKEVRGDVFTLSPFTPISLPFAEVTISPAPEEVVTEGMVLLNVSGLPEELVNATEEISSPEVSVSVVAVSVAIEDLTATAGLGVTEVPPHTPATIEELVPKATAAPDVLATRPDVLTAAPPAVETPITDELDQSVTLCPISPMAPTGVVFHYRAISSRYSLNFTEAQIACLENNAFIASPEQLQAAYKRGYNQCDAGWLSDQTVRYPMVDPRERCFGDKHGFPGVRSYGVRNPEETYDVYCYIEALNGKVFHATVADGFTYDEAVDYCVSHNAKMATTGQLYAAWKQGMDRCRAGWISDGSVRYPIQTPRPYCGNGQAGVRTIYLNVDQTGYPDPHSRYDVYCFRETVVPVVTEEPAVVKLTVPVILVEQVTWTPEVARTVRPEEAEQGRTDLFIKETAEPPTATMGLIEETIATQVAPHVAVLPPESSIAPQATEPTTGAIPDLYITTEEAGTVFPSATPTAEPGSADVTPLPEAEVSGEPSGIPDISGLPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDISEEPSGIPDVSGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPGIPDVSGESSGILDTSGEPSGIPDISGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDISGEPSGIPDISGEPSGIPDISGESSGILDISGEPSGIPDLRGEPSGIPDISGEPSGIPDISGEPSGIPDISGESSGILDTSGEPSGIPDISGEPSGIPDLSGEPSGIPDISGEPSGIPDVSGESSGILDISGEPSGIPDISGEFSGMPDFSGEPSGMPESSGEKLEAVDVSGEASGIWVVLITTEDQQYPTMPTEFVELGKGPIEEHIPDTSGEPSGIPEISAEASGIPDLSGEPSGLPEISGSPSGIPDISGESSGLDVMSGIPSGVPDISGESSGVPEIHEIPSGIPDTSGEPSGIPEVSGVASGAPDISGEPSGTPVVSGELDVTGKPDEVSGEPSGVSQTIFTSRIIDISKDPEEDEEPSGAPEVPAEPSVMPVPIAPGVTDSSIARQTVVETTHVEVKLPEEGQRESEEVSSVSIDSSTAEEHPETVEVLAVTPPAPVLLSTIPPQISPDTVAIVDEPTTAEVVPDPCQDSPCGQGTCVVRDGSSMCDCPVGWIGTHCEIDVEKCDVGWAKFQGHCYKHFADRQTWEEAEHQCRKHEAHLASLITPEEQAFVNSYAQDYQWVGLNDKTIEGDFRWTDSSPLLYENWRPNQPDSFFSTGEDCVVMIWHEGGQWNDVPCNYHLPYTCKKGTVACGQPPEVKHAKSFGKKKERFEINSLIRYQCKNGFLQRHFPNIKCQPNGQWEQPRIVCIDTTTYYRKPQKRVDTSRSHTQNESSASQSSAP
SIO_010081: acan
subclass of: SO_0000673
so part of: acan
location: complement(join(6005625..6005719,6007485..6007667,6011042..6011186,6012466..6012548,6013736..6013894,6025245..6025358,6032428..6034335,6034756..6034884,6038775..6039134,6043549..6043842,6046839..6046966,6051816..6051990,6053133..6053717,6055926..6056219,6059231..6059358,6061562..6061736,6062685..6063071,6067974..6068043))
location: region:6005625-6068043:-1
so has part: feature:6067974-6068043:-1:exon
so has part: feature:6062685-6063071:-1:exon
so has part: feature:6061562-6061736:-1:exon
so has part: feature:6059231-6059358:-1:exon
so has part: feature:6055926-6056219:-1:exon
so has part: feature:6053133-6053717:-1:exon
so has part: feature:6051816-6051990:-1:exon
so has part: feature:6046839-6046966:-1:exon
so has part: feature:6043549-6043842:-1:exon
so has part: feature:6038775-6039134:-1:exon
so has part: feature:6034756-6034884:-1:exon
so has part: feature:6032428-6034335:-1:exon
so has part: feature:6025245-6025358:-1:exon
so has part: feature:6013736-6013894:-1:exon
so has part: feature:6012466-6012548:-1:exon
so has part: feature:6011042-6011186:-1:exon
so has part: feature:6007485-6007667:-1:exon
so has part: feature:6005625-6005719:-1:exon

XP_032906376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6067974-6068043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6062685-6063071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6061562-6061736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6059231-6059358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6055926-6056219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6053133-6053717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6051816-6051990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6046839-6046966:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6043549-6043842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6038775-6039134:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6034756-6034884:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6032428-6034335:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6025245-6025358:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6013736-6013894:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6012466-6012548:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6011042-6011186:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6007485-6007667:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6005625-6005719:-1:exon

acan
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: acan
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aggrecan core protein isoform X1
translation: MTTLLLVFVCLRVIAAAISVEVSDNAKALSVKIASQSPLNAVLASSVAFPCYFLTSAPLSADSPLASLLEPRIKWTKIAKGGKETVIVVATSGKVKISQEYKGRVKLPSYLDIPNDATLELDKVLSSDSGMYRCEVMHGIEDSQDVVELVVKGIIFHYRAISSRYTLNFYKAQQACVDNTATIATPDQLQAAYDDGYDQCDAGWMADQTVRYPIHDPREGCYGNLDEYPGVRSYGIRDTNETYDVYCFAKDLQGKVFYITTTERYAFKEAMEACFDKGAQLATTGQLYLAWKGGMDQCNTGWLADGSVRYPISNRRLNCGGNLLGVRTVYRFTNQTGYPDPSDRHDAYCFSGKFGVETFTDTPLVYPATEPEGAFTDEGSAFTIQTIPDKVEVFFTKTTEQKEVRGDVFTLSPFTPISLPFAEVTISPAPEEVVTEGMVLLNVSGLPEELVNATEEISSPEVSVSVVAVSVAIEDLTATAGLGVTEVPPHTPATIEELVPKATAAPDVLATRPDVLTAAPPAVETPITDELDQSVTLCPISPMAPTGVVFHYRAISSRYSLNFTEAQIACLENNAFIASPEQLQAAYKRGYNQCDAGWLSDQTVRYPMVDPRERCFGDKHGFPGVRSYGVRNPEETYDVYCYIEALNGKVFHATVADGFTYDEAVDYCVSHNAKMATTGQLYAAWKQGMDRCRAGWISDGSVRYPIQTPRPYCGNGQAGVRTIYLNVDQTGYPDPHSRYDVYCFRETVVPVVTEEPAVVKLTVPVILVEQVTWTPEVARTVRPEEAEQGRTDLFIKETAEPPTATMGLIEETIATQVAPHVAVLPPESSIAPQATEPTTGAIPDLYITTEEAGTVFPSATPTAEPGSADVTPLPEAEVSGEPSGIPDISGLPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDISEEPSGIPDVSGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPGIPDVSGESSGILDTSGEPSGIPDISGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDVSGEPSGIPDISGEPSGIPDISGEPSGIPDISGEPSGIPDISGESSGILDISGEPSGIPDLRGEPSGIPDISGEPSGIPDISGEPSGIPDISGESSGILDTSGEPSGIPDISGEPSGIPDLSGEPSGIPDISGEPSGIPDVSGESSGILDISGEPSGIPDISGEFSGMPDFSGEPSGMPESSGEKLEAVDVSGEASGIWVVLITTEDQQYPTMPTEFVELGKGPIEEHIPDTSGEPSGIPEISAEASGIPDLSGEPSGLPEISGSPSGIPDISGESSGLDVMSGIPSGVPDISGESSGVPEIHEIPSGIPDTSGEPSGIPEVSGVASGAPDISGEPSGTPVVSGELDVTGKPDEVSGEPSGVSQTIFTSRIIDISKDPEEDEEPSGAPEVPAEPSVMPVPIAPGVTDSSIARQTVVETTHVEVKLPEEGQRESEEVSSVSIDSSTAEEHPETVEVLAVTPPAPVLLSTIPPQISPDTVAIVDEPTTAEVVPDPCQDSPCGQGTCVVRDGSSMCDCPVGWIGTHCEIEIDECHSSPCLNGATCMDGIDSFKCLCLPSYGGNLCEIDVEKCDVGWAKFQGHCYKHFADRQTWEEAEHQCRKHEAHLASLITPEEQAFVNSYAQDYQWVGLNDKTIEGDFRWTDSSPLLYENWRPNQPDSFFSTGEDCVVMIWHEGGQWNDVPCNYHLPYTCKKGTVACGQPPEVKHAKSFGKKKERFEINSLIRYQCKNGFLQRHFPNIKCQPNGQWEQPRIVCIDTTTYYRKPQKRVDTSRSHTQNESSASQSSAP
SIO_010081: acan
subclass of: SO_0000673
so part of: acan
location: complement(join(6005625..6005719,6007485..6007667,6011042..6011186,6012466..6012548,6013736..6013894,6022790..6022903,6025245..6025358,6032428..6034335,6034756..6034884,6038775..6039134,6043549..6043842,6046839..6046966,6051816..6051990,6053133..6053717,6055926..6056219,6059231..6059358,6061562..6061736,6062685..6063071,6067974..6068043))
location: region:6005625-6068043:-1
so has part: feature:6067974-6068043:-1:exon
so has part: feature:6062685-6063071:-1:exon
so has part: feature:6061562-6061736:-1:exon
so has part: feature:6059231-6059358:-1:exon
so has part: feature:6055926-6056219:-1:exon
so has part: feature:6053133-6053717:-1:exon
so has part: feature:6051816-6051990:-1:exon
so has part: feature:6046839-6046966:-1:exon
so has part: feature:6043549-6043842:-1:exon
so has part: feature:6038775-6039134:-1:exon
so has part: feature:6034756-6034884:-1:exon
so has part: feature:6032428-6034335:-1:exon
so has part: feature:6025245-6025358:-1:exon
so has part: feature:6022790-6022903:-1:exon
so has part: feature:6013736-6013894:-1:exon
so has part: feature:6012466-6012548:-1:exon
so has part: feature:6011042-6011186:-1:exon
so has part: feature:6007485-6007667:-1:exon
so has part: feature:6005625-6005719:-1:exon

XP_032906374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6067974-6068043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6062685-6063071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6061562-6061736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6059231-6059358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6055926-6056219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6053133-6053717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6051816-6051990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6046839-6046966:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6043549-6043842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6038775-6039134:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6034756-6034884:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6032428-6034335:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6025245-6025358:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6022790-6022903:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6013736-6013894:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6012466-6012548:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6011042-6011186:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6007485-6007667:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6005625-6005719:-1:exon

LOC116991671
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991671
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6033492..6034806
location: region:6033492-6034806:1
so has part: feature:6033492-6034806:1:exon
subclass of: SO_0000011

116991671
type: Gene
SIO_000068: ncbigene

position:6033492:1
position: 6033492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6034806:1
position: 6034806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6033492-6034806:1:exon

LOC116991671
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991671
product: uncharacterized LOC116991671, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416861.1
SIO_010081: LOC116991671
subclass of: SO_0000673
so part of: LOC116991671
location: join(6033492..6033537,6033688..6033819,6033880..6033969,6034117..6034146,6034237..6034326,6034447..6034476,6034567..6034656,6034717..6034806)
location: region:6033492-6034806:1
so has part: feature:6033492-6033537:1:exon
so has part: feature:6033688-6033819:1:exon
so has part: feature:6033880-6033969:1:exon
so has part: feature:6034117-6034146:1:exon
so has part: feature:6034237-6034326:1:exon
so has part: feature:6034447-6034476:1:exon
so has part: feature:6034567-6034656:1:exon
so has part: feature:6034717-6034806:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6033492-6033537:1:exon

position:6033537:1
position: 6033537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6033688-6033819:1:exon

position:6033688:1
position: 6033688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6033819:1
position: 6033819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6033880-6033969:1:exon

position:6033880:1
position: 6033880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6033969:1
position: 6033969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6034117-6034146:1:exon

position:6034117:1
position: 6034117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6034146:1
position: 6034146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6034237-6034326:1:exon

position:6034237:1
position: 6034237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6034326:1
position: 6034326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6034447-6034476:1:exon

position:6034447:1
position: 6034447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6034476:1
position: 6034476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6034567-6034656:1:exon

position:6034567:1
position: 6034567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6034656:1
position: 6034656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6034717-6034806:1:exon

position:6034717:1
position: 6034717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991671
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991671
product: uncharacterized LOC116991671, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004416862.1
SIO_010081: LOC116991671
subclass of: SO_0000673
so part of: LOC116991671
location: join(6033492..6033537,6033688..6033819,6033880..6033939,6034147..6034326,6034447..6034476,6034567..6034656,6034717..6034806)
location: region:6033492-6034806:1
so has part: feature:6033492-6033537:1:exon
so has part: feature:6033688-6033819:1:exon
so has part: feature:6033880-6033939:1:exon
so has part: feature:6034147-6034326:1:exon
so has part: feature:6034447-6034476:1:exon
so has part: feature:6034567-6034656:1:exon
so has part: feature:6034717-6034806:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6033492-6033537:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6033688-6033819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6033880-6033939:1:exon

position:6033939:1
position: 6033939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6034147-6034326:1:exon

position:6034147:1
position: 6034147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6034447-6034476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6034567-6034656:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6034717-6034806:1:exon

trnag-gcc
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trnag-gcc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(6231024..6231094)
location: region:6231024-6231094:-1
so has part: feature:6231024-6231094:-1:exon
subclass of: SO_0000663

116991787
type: Gene
SIO_000068: ncbigene

position:6231024:-1
position: 6231024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6231094:-1
position: 6231094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6231024-6231094:-1:exon

trnag-gcc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 386614
gene: trnag-gcc
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(6231060..6231062),aa:Gly, seq:gcc)
SIO_010081: trnag-gcc
subclass of: SO_0000673
so part of: trnag-gcc
location: complement(6231024..6231094)
location: region:6231024-6231094:-1
so has part: feature:6231024-6231094:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6231024-6231094:-1:exon

LOC116991641
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6332673..6336578)
location: region:6332673-6336578:-1
so has part: feature:6332673-6336578:-1:exon
subclass of: SO_0000010

116991641
type: Gene
SIO_000068: ncbigene

position:6332673:-1
position: 6332673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6336578:-1
position: 6336578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6332673-6336578:-1:exon

LOC116991641
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991641
product: mesoderm posterior protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033050402.1
SIO_010081: LOC116991641
subclass of: SO_0000673
so part of: LOC116991641
location: complement(join(6332673..6332871,6335892..6336578))
location: region:6332673-6336578:-1
so has part: feature:6335892-6336578:-1:exon
so has part: feature:6332673-6332871:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6335892-6336578:-1:exon

position:6335892:-1
position: 6335892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6332673-6332871:-1:exon

position:6332871:-1
position: 6332871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116991641
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm posterior protein 1-like
translation: MEVATQAVLAQRYVTSSGFGAALDCSSLCSGNGWNSTSSETNRSSDSSVSPIASPRCAPGDPCQAKGRPEEKGESGQQARKSRSRHLGRERQSASEREKLRMRGLAKALHNLRTYLPPSVAPAAQSLTKLETLRLTIRYIAHLTDVLALGEQMPTVGGGPCRAGGPQGWCPNAQGPPAQCPVYLGGTAVNGASELAAAFQDIGRGQSFTENNANLQLVPWFPWQH
SIO_010081: LOC116991641
subclass of: SO_0000673
so part of: LOC116991641
location: complement(join(6332812..6332871,6335892..6336509))
location: region:6332812-6336509:-1
so has part: feature:6335892-6336509:-1:exon
so has part: feature:6332812-6332871:-1:exon

XP_032906293.1
type: Protein
SIO_000068: ncbiprotein

position:6332812:-1
position: 6332812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6336509:-1
position: 6336509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6335892-6336509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6332812-6332871:-1:exon

LOC116991774
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991774
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 6427808..6427920
location: region:6427808-6427920:1
so has part: feature:6427808-6427920:1:exon

116991774
type: Gene
SIO_000068: ncbigene

position:6427808:1
position: 6427808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6427920:1
position: 6427920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6427808-6427920:1:exon

LOC116991774
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991774
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116991774
subclass of: SO_0000673
so part of: LOC116991774
location: 6427808..6427920
location: region:6427808-6427920:1
so has part: feature:6427808-6427920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6427808-6427920:1:exon

LOC116991575
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6548385..6562780
location: region:6548385-6562780:1
so has part: feature:6548385-6562780:1:exon
subclass of: SO_0000010

116991575
type: Gene
SIO_000068: ncbigene

position:6548385:1
position: 6548385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6562780:1
position: 6562780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6548385-6562780:1:exon

LOC116991575
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991575
product: gonadotropin-releasing hormone II receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 79 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033050287.1
SIO_010081: LOC116991575
subclass of: SO_0000673
so part of: LOC116991575
location: join(6548385..6549079,6557568..6557772,6560721..6562780)
location: region:6548385-6562780:1
so has part: feature:6548385-6549079:1:exon
so has part: feature:6557568-6557772:1:exon
so has part: feature:6560721-6562780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6548385-6549079:1:exon

position:6549079:1
position: 6549079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6557568-6557772:1:exon

position:6557568:1
position: 6557568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6557772:1
position: 6557772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6560721-6562780:1:exon

position:6560721:1
position: 6560721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116991575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gonadotropin-releasing hormone II receptor-like
translation: MNASLDAFISLYLRQTRCDYNGTDEAMAMVRRCNGSGSPHFQIPVFSGVAKVRVGITALVFTVSAFCNLAVLWTTGRNRKRRSHVRILIVNLVVADLLVTFVVMPLDAAWNITVQWQGGDLACRLLMFLKLMAMYSCAFVTVVISIDRQSAILNPLGISEAKKKNKIMLTVAWLLSAILSIPQILLFHTTSINVPQNFTQCSTIGSFKEHWQETSYNMFTFVFLFLMPLMIMIFCYTRILMEISKRMAKGNLSSKEVHLRRSKNNIPKARLRTLKMSIIIVTSFIVCWTPYYLLGLWYWFSPEMLSEEKVSPALSQILFIFGLFNTVLDPITYGLFTIQFRKSLQCCCHSDKTASNLNLNTTQTGSFRCSGSSFRLKKLIALGQEGQRSIAENESHSNSNYCKNGYLDAPGGCQ
SIO_010081: LOC116991575
subclass of: SO_0000673
so part of: LOC116991575
location: join(6548531..6549079,6557568..6557772,6560721..6561211)
location: region:6548531-6561211:1
so has part: feature:6548531-6549079:1:exon
so has part: feature:6557568-6557772:1:exon
so has part: feature:6560721-6561211:1:exon

XP_032906178.1
type: Protein
SIO_000068: ncbiprotein

position:6548531:1
position: 6548531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6561211:1
position: 6561211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6548531-6549079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6557568-6557772:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6560721-6561211:1:exon

LOC116991781
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991781
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(6602273..6602374)
location: region:6602273-6602374:-1
so has part: feature:6602273-6602374:-1:exon

116991781
type: Gene
SIO_000068: ncbigene

position:6602273:-1
position: 6602273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6602374:-1
position: 6602374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6602273-6602374:-1:exon

LOC116991781
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116991781
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116991781
subclass of: SO_0000673
so part of: LOC116991781
location: complement(6602273..6602374)
location: region:6602273-6602374:-1
so has part: feature:6602273-6602374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6602273-6602374:-1:exon

wdr93
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: wdr93
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6666065..6731384)
location: region:6666065-6731384:-1
so has part: feature:6666065-6731384:-1:exon
subclass of: SO_0000010

116991530
type: Gene
SIO_000068: ncbigene

position:6666065:-1
position: 6666065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6731384:-1
position: 6731384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6666065-6731384:-1:exon

wdr93
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wdr93
product: WD repeat domain 93, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033050202.1
SIO_010081: wdr93
subclass of: SO_0000673
so part of: wdr93
location: complement(join(6666065..6666647,6666765..6666877,6668515..6668689,6670489..6670645,6682007..6682067,6686207..6686408,6686847..6686978,6693093..6693182,6695918..6695988,6696745..6696925,6699817..6699898,6707431..6707534,6717072..6717150,6718446..6718510,6724432..6724633,6725430..6725724,6731059..6731384))
location: region:6666065-6731384:-1
so has part: feature:6731059-6731384:-1:exon
so has part: feature:6725430-6725724:-1:exon
so has part: feature:6724432-6724633:-1:exon
so has part: feature:6718446-6718510:-1:exon
so has part: feature:6717072-6717150:-1:exon
so has part: feature:6707431-6707534:-1:exon
so has part: feature:6699817-6699898:-1:exon
so has part: feature:6696745-6696925:-1:exon
so has part: feature:6695918-6695988:-1:exon
so has part: feature:6693093-6693182:-1:exon
so has part: feature:6686847-6686978:-1:exon
so has part: feature:6686207-6686408:-1:exon
so has part: feature:6682007-6682067:-1:exon
so has part: feature:6670489-6670645:-1:exon
so has part: feature:6668515-6668689:-1:exon
so has part: feature:6666765-6666877:-1:exon
so has part: feature:6666065-6666647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6731059-6731384:-1:exon

position:6731059:-1
position: 6731059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6725430-6725724:-1:exon

position:6725430:-1
position: 6725430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6725724:-1
position: 6725724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6724432-6724633:-1:exon

position:6724432:-1
position: 6724432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6724633:-1
position: 6724633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6718446-6718510:-1:exon

position:6718446:-1
position: 6718446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6718510:-1
position: 6718510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6717072-6717150:-1:exon

position:6717072:-1
position: 6717072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6717150:-1
position: 6717150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6707431-6707534:-1:exon

position:6707431:-1
position: 6707431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6707534:-1
position: 6707534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6699817-6699898:-1:exon

position:6699817:-1
position: 6699817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6699898:-1
position: 6699898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6696745-6696925:-1:exon

position:6696745:-1
position: 6696745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6696925:-1
position: 6696925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6695918-6695988:-1:exon

position:6695918:-1
position: 6695918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6695988:-1
position: 6695988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6693093-6693182:-1:exon

position:6693093:-1
position: 6693093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6693182:-1
position: 6693182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6686847-6686978:-1:exon

position:6686847:-1
position: 6686847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6686978:-1
position: 6686978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6686207-6686408:-1:exon

position:6686207:-1
position: 6686207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6686408:-1
position: 6686408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6682007-6682067:-1:exon

position:6682007:-1
position: 6682007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6682067:-1
position: 6682067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6670489-6670645:-1:exon

position:6670489:-1
position: 6670489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6670645:-1
position: 6670645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6668515-6668689:-1:exon

position:6668515:-1
position: 6668515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6668689:-1
position: 6668689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6666765-6666877:-1:exon

position:6666765:-1
position: 6666765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6666877:-1
position: 6666877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6666065-6666647:-1:exon

position:6666647:-1
position: 6666647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

wdr93
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wdr93
product: WD repeat domain 93, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033050203.1
SIO_010081: wdr93
subclass of: SO_0000673
so part of: wdr93
location: complement(join(6666065..6666643,6666765..6666877,6668515..6668689,6670489..6670645,6682007..6682067,6686207..6686408,6686847..6686978,6693093..6693182,6695918..6695988,6696745..6696925,6699817..6699898,6707419..6707534,6717072..6717150,6718446..6718510,6724432..6724633,6725430..6725724,6731059..6731384))
location: region:6666065-6731384:-1
so has part: feature:6731059-6731384:-1:exon
so has part: feature:6725430-6725724:-1:exon
so has part: feature:6724432-6724633:-1:exon
so has part: feature:6718446-6718510:-1:exon
so has part: feature:6717072-6717150:-1:exon
so has part: feature:6707419-6707534:-1:exon
so has part: feature:6699817-6699898:-1:exon
so has part: feature:6696745-6696925:-1:exon
so has part: feature:6695918-6695988:-1:exon
so has part: feature:6693093-6693182:-1:exon
so has part: feature:6686847-6686978:-1:exon
so has part: feature:6686207-6686408:-1:exon
so has part: feature:6682007-6682067:-1:exon
so has part: feature:6670489-6670645:-1:exon
so has part: feature:6668515-6668689:-1:exon
so has part: feature:6666765-6666877:-1:exon
so has part: feature:6666065-6666643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6731059-6731384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6725430-6725724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6724432-6724633:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6718446-6718510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6717072-6717150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6707419-6707534:-1:exon

position:6707419:-1
position: 6707419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6699817-6699898:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6696745-6696925:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6695918-6695988:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6693093-6693182:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6686847-6686978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6686207-6686408:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6682007-6682067:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6670489-6670645:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6668515-6668689:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6666765-6666877:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6666065-6666643:-1:exon

position:6666643:-1
position: 6666643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

wdr93
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wdr93
product: WD repeat domain 93, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033050200.1
SIO_010081: wdr93
subclass of: SO_0000673
so part of: wdr93
location: complement(join(6666065..6666647,6666765..6666877,6668515..6668689,6670489..6670645,6682007..6682067,6686207..6686408,6686847..6686978,6693093..6693182,6695918..6695988,6696745..6696925,6699817..6699898,6707419..6707534,6717072..6717150,6718446..6718510,6724432..6724633,6725430..6725724,6731059..6731384))
location: region:6666065-6731384:-1
so has part: feature:6731059-6731384:-1:exon
so has part: feature:6725430-6725724:-1:exon
so has part: feature:6724432-6724633:-1:exon
so has part: feature:6718446-6718510:-1:exon
so has part: feature:6717072-6717150:-1:exon
so has part: feature:6707419-6707534:-1:exon
so has part: feature:6699817-6699898:-1:exon
so has part: feature:6696745-6696925:-1:exon
so has part: feature:6695918-6695988:-1:exon
so has part: feature:6693093-6693182:-1:exon
so has part: feature:6686847-6686978:-1:exon
so has part: feature:6686207-6686408:-1:exon
so has part: feature:6682007-6682067:-1:exon
so has part: feature:6670489-6670645:-1:exon
so has part: feature:6668515-6668689:-1:exon
so has part: feature:6666765-6666877:-1:exon
so has part: feature:6666065-6666647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6731059-6731384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6725430-6725724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6724432-6724633:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6718446-6718510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6717072-6717150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6707419-6707534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6699817-6699898:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6696745-6696925:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6695918-6695988:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6693093-6693182:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6686847-6686978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6686207-6686408:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6682007-6682067:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6670489-6670645:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6668515-6668689:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6666765-6666877:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6666065-6666647:-1:exon

wdr93
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wdr93
product: WD repeat domain 93, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033050201.1
SIO_010081: wdr93
subclass of: SO_0000673
so part of: wdr93
location: complement(join(6666065..6666647,6666765..6666877,6668515..6668689,6670489..6670645,6682007..6682067,6686207..6686408,6686847..6686978,6693093..6693182,6695918..6695988,6696745..6696925,6699817..6699898,6707419..6707534,6717072..6717150,6718446..6718510,6724432..6724633,6725430..6725724,6731055..6731384))
location: region:6666065-6731384:-1
so has part: feature:6731055-6731384:-1:exon
so has part: feature:6725430-6725724:-1:exon
so has part: feature:6724432-6724633:-1:exon
so has part: feature:6718446-6718510:-1:exon
so has part: feature:6717072-6717150:-1:exon
so has part: feature:6707419-6707534:-1:exon
so has part: feature:6699817-6699898:-1:exon
so has part: feature:6696745-6696925:-1:exon
so has part: feature:6695918-6695988:-1:exon
so has part: feature:6693093-6693182:-1:exon
so has part: feature:6686847-6686978:-1:exon
so has part: feature:6686207-6686408:-1:exon
so has part: feature:6682007-6682067:-1:exon
so has part: feature:6670489-6670645:-1:exon
so has part: feature:6668515-6668689:-1:exon
so has part: feature:6666765-6666877:-1:exon
so has part: feature:6666065-6666647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6731055-6731384:-1:exon

position:6731055:-1
position: 6731055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6725430-6725724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6724432-6724633:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6718446-6718510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6717072-6717150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6707419-6707534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6699817-6699898:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6696745-6696925:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6695918-6695988:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6693093-6693182:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6686847-6686978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6686207-6686408:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6682007-6682067:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6670489-6670645:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6668515-6668689:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6666765-6666877:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6666065-6666647:-1:exon

wdr93
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wdr93
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 93 isoform X2
translation: MASNYFKYLAVPTPSEHNWNGNDENDYYLQDPEQLFDELPQPFRMIDKLIGRIIENACEVIEKREAEREAERLKKKIPLCESSEEIQVAGNVNCLASSADGSYIFAGLSEGVAVLSMGDHTVKTIWKTEDVEIVALQVKTVGNQLYLLAAVDDMGLAHLLFYYDDMFSSIKVFNAFENISERNTCSKFELSDGGDYAGVTLEAKGETWLEVYRLMKDNWVQEFDQFAKLLELIESSEQMNLPNPQDIKWTPPSLVMKVRPKQITDCIWKNPFDALQKLDDGSIIGTGQNHVITAQQWNGEKKIFEEMYETYLSKDTTEQSEEKQSQPTIHFLNLGRLLPVGLEQKTQVGLPNDLCVWWNGSHVLFHYILKIPGAKEKIDLEPKANIVWPNASPITCSAVETCASLLAISLTDGTVTLWDLYMGLPISVLAVSVDSAIRSLHILESSYCVPSASSNGHSKAQVLATCKSGAVYLITANAHTEGTITTLKERNEAPGKVISAVALVPQLSSQILLILTDGTISLLDSTDGDALCHYVLPFPRTVAFPWKPVFAFDRDGSFLFIKADNKISNQTPDQEESNSSLFAFSLLSLYPLDKCTKMKEPPQPPTQTTWEKRCEQFLQERLKSVMRRNEEMTKCWHQLQHHAMSIRQGKGFKEDSMTNRMLNKST
SIO_010081: wdr93
subclass of: SO_0000673
so part of: wdr93
location: complement(join(6666622..6666647,6666765..6666877,6668515..6668689,6670489..6670645,6682007..6682067,6686207..6686408,6686847..6686978,6693093..6693182,6695918..6695988,6696745..6696925,6699817..6699898,6707431..6707534,6717072..6717150,6718446..6718510,6724432..6724633,6725430..6725690))
location: region:6666622-6725690:-1
so has part: feature:6725430-6725690:-1:exon
so has part: feature:6724432-6724633:-1:exon
so has part: feature:6718446-6718510:-1:exon
so has part: feature:6717072-6717150:-1:exon
so has part: feature:6707431-6707534:-1:exon
so has part: feature:6699817-6699898:-1:exon
so has part: feature:6696745-6696925:-1:exon
so has part: feature:6695918-6695988:-1:exon
so has part: feature:6693093-6693182:-1:exon
so has part: feature:6686847-6686978:-1:exon
so has part: feature:6686207-6686408:-1:exon
so has part: feature:6682007-6682067:-1:exon
so has part: feature:6670489-6670645:-1:exon
so has part: feature:6668515-6668689:-1:exon
so has part: feature:6666765-6666877:-1:exon
so has part: feature:6666622-6666647:-1:exon

XP_032906093.1
type: Protein
SIO_000068: ncbiprotein

position:6666622:-1
position: 6666622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6725690:-1
position: 6725690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6725430-6725690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6724432-6724633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6718446-6718510:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6717072-6717150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6707431-6707534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6699817-6699898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6696745-6696925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6695918-6695988:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6693093-6693182:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6686847-6686978:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6686207-6686408:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6682007-6682067:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6670489-6670645:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6668515-6668689:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6666765-6666877:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6666622-6666647:-1:exon

wdr93
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wdr93
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 93 isoform X1
translation: MASNYFKYLAVPTPSEHNWNGNDENDYYLQDPEQLFDELPQPFRMIDKLIGRIIENACEVIEKREAEREAERLKKKIPLCESSEEIQVAGNVNCLASSADGSYIFAGLSEGVAVLSMGDHTVKTIWKTEDVEIVALQVKTVGNQLYLLAAVDDMGLAHLLFYYDDMFSSIKVFNAFENISERNTCSKFELSDGGDYAGVTLEAKGETWLEVYRLMKDNWVQEFDQFAKLLELIESSEVSSKQMNLPNPQDIKWTPPSLVMKVRPKQITDCIWKNPFDALQKLDDGSIIGTGQNHVITAQQWNGEKKIFEEMYETYLSKDTTEQSEEKQSQPTIHFLNLGRLLPVGLEQKTQVGLPNDLCVWWNGSHVLFHYILKIPGAKEKIDLEPKANIVWPNASPITCSAVETCASLLAISLTDGTVTLWDLYMGLPISVLAVSVDSAIRSLHILESSYCVPSASSNGHSKAQVLATCKSGAVYLITANAHTEGTITTLKERNEAPGKVISAVALVPQLSSQILLILTDGTISLLDSTDGDALCHYVLPFPRTVAFPWKPVFAFDRDGSFLFIKADNKISNQTPDQEESNSSLFAFSLLSLYPLDKCTKMKEPPQPPTQTTWEKRCEQFLQERLKSVMRRNEEMTKCWHQLQHHAMSIRQGKGFKEDSMTNRMLNKST
SIO_010081: wdr93
subclass of: SO_0000673
so part of: wdr93
location: complement(join(6666622..6666647,6666765..6666877,6668515..6668689,6670489..6670645,6682007..6682067,6686207..6686408,6686847..6686978,6693093..6693182,6695918..6695988,6696745..6696925,6699817..6699898,6707419..6707534,6717072..6717150,6718446..6718510,6724432..6724633,6725430..6725690))
location: region:6666622-6725690:-1
so has part: feature:6725430-6725690:-1:exon
so has part: feature:6724432-6724633:-1:exon
so has part: feature:6718446-6718510:-1:exon
so has part: feature:6717072-6717150:-1:exon
so has part: feature:6707419-6707534:-1:exon
so has part: feature:6699817-6699898:-1:exon
so has part: feature:6696745-6696925:-1:exon
so has part: feature:6695918-6695988:-1:exon
so has part: feature:6693093-6693182:-1:exon
so has part: feature:6686847-6686978:-1:exon
so has part: feature:6686207-6686408:-1:exon
so has part: feature:6682007-6682067:-1:exon
so has part: feature:6670489-6670645:-1:exon
so has part: feature:6668515-6668689:-1:exon
so has part: feature:6666765-6666877:-1:exon
so has part: feature:6666622-6666647:-1:exon

XP_032906091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6725430-6725690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6724432-6724633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6718446-6718510:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6717072-6717150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6707419-6707534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6699817-6699898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6696745-6696925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6695918-6695988:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6693093-6693182:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6686847-6686978:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6686207-6686408:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6682007-6682067:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6670489-6670645:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6668515-6668689:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6666765-6666877:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6666622-6666647:-1:exon

wdr93
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wdr93
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 93 isoform X1
translation: MASNYFKYLAVPTPSEHNWNGNDENDYYLQDPEQLFDELPQPFRMIDKLIGRIIENACEVIEKREAEREAERLKKKIPLCESSEEIQVAGNVNCLASSADGSYIFAGLSEGVAVLSMGDHTVKTIWKTEDVEIVALQVKTVGNQLYLLAAVDDMGLAHLLFYYDDMFSSIKVFNAFENISERNTCSKFELSDGGDYAGVTLEAKGETWLEVYRLMKDNWVQEFDQFAKLLELIESSEVSSKQMNLPNPQDIKWTPPSLVMKVRPKQITDCIWKNPFDALQKLDDGSIIGTGQNHVITAQQWNGEKKIFEEMYETYLSKDTTEQSEEKQSQPTIHFLNLGRLLPVGLEQKTQVGLPNDLCVWWNGSHVLFHYILKIPGAKEKIDLEPKANIVWPNASPITCSAVETCASLLAISLTDGTVTLWDLYMGLPISVLAVSVDSAIRSLHILESSYCVPSASSNGHSKAQVLATCKSGAVYLITANAHTEGTITTLKERNEAPGKVISAVALVPQLSSQILLILTDGTISLLDSTDGDALCHYVLPFPRTVAFPWKPVFAFDRDGSFLFIKADNKISNQTPDQEESNSSLFAFSLLSLYPLDKCTKMKEPPQPPTQTTWEKRCEQFLQERLKSVMRRNEEMTKCWHQLQHHAMSIRQGKGFKEDSMTNRMLNKST
SIO_010081: wdr93
subclass of: SO_0000673
so part of: wdr93
location: complement(join(6666622..6666647,6666765..6666877,6668515..6668689,6670489..6670645,6682007..6682067,6686207..6686408,6686847..6686978,6693093..6693182,6695918..6695988,6696745..6696925,6699817..6699898,6707419..6707534,6717072..6717150,6718446..6718510,6724432..6724633,6725430..6725690))
location: region:6666622-6725690:-1
so has part: feature:6725430-6725690:-1:exon
so has part: feature:6724432-6724633:-1:exon
so has part: feature:6718446-6718510:-1:exon
so has part: feature:6717072-6717150:-1:exon
so has part: feature:6707419-6707534:-1:exon
so has part: feature:6699817-6699898:-1:exon
so has part: feature:6696745-6696925:-1:exon
so has part: feature:6695918-6695988:-1:exon
so has part: feature:6693093-6693182:-1:exon
so has part: feature:6686847-6686978:-1:exon
so has part: feature:6686207-6686408:-1:exon
so has part: feature:6682007-6682067:-1:exon
so has part: feature:6670489-6670645:-1:exon
so has part: feature:6668515-6668689:-1:exon
so has part: feature:6666765-6666877:-1:exon
so has part: feature:6666622-6666647:-1:exon

XP_032906092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6725430-6725690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6724432-6724633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6718446-6718510:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6717072-6717150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6707419-6707534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6699817-6699898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6696745-6696925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6695918-6695988:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6693093-6693182:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6686847-6686978:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6686207-6686408:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6682007-6682067:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6670489-6670645:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6668515-6668689:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6666765-6666877:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6666622-6666647:-1:exon

wdr93
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wdr93
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 93 isoform X3
translation: MASNYFKYLAVPTPSEHNWNGNDENDYYLQDPEQLFDELPQPFRMIDKLIGRIIENACEVIEKREAEREAERLKKKIPLCESSEEIQVAGNVNCLASSADGSYIFAGLSEGVAVLSMGDHTVKTIWKTEDVEIVALQVKTVGNQLYLLAAVDDMGLAHLLFYYDDMFSSIKVFNAFENISERNTCSKFELSDGGDYAGVTLEAKGETWLEVYRLMKDNWVQEFDQFAKLLELIESSEVSSKQMNLPNPQDIKWTPPSLVMKVRPKQITDCIWKNPFDALQKLDDGSIIGTGQNHVITAQQWNGEKKIFEEMYETYLSKDTTEQSEEKQSQPTIHFLNLGRLLPVGLEQKTQVGLPNDLCVWWNGSHVLFHYILKIPGAKEKIDLEPKANIVWPNASPITCSAVETCASLLAISLTDGTVTLWDLYMGLPISVLAVSVDSAIRSLHILESSYCVPSASSNGHSKAQVLATCKSGAVYLITANAHTEGTITTLKERNEAPGKVISAVALVPQLSSQILLILTDGTISLLDSTDGDALCHYVLPFPRTVAFPWKPVFAFDRDGSFLFIKADNKISNQTPDQEESNSSLFAFSLLSLYPLDKCTKMKEPPQPPTQTTWEKRCEQFLQERLKSVMRRNEEMTKCWHQLQHHAMSIRQGKGFKEDSMTRC
SIO_010081: wdr93
subclass of: SO_0000673
so part of: wdr93
location: complement(join(6666636..6666643,6666765..6666877,6668515..6668689,6670489..6670645,6682007..6682067,6686207..6686408,6686847..6686978,6693093..6693182,6695918..6695988,6696745..6696925,6699817..6699898,6707419..6707534,6717072..6717150,6718446..6718510,6724432..6724633,6725430..6725690))
location: region:6666636-6725690:-1
so has part: feature:6725430-6725690:-1:exon
so has part: feature:6724432-6724633:-1:exon
so has part: feature:6718446-6718510:-1:exon
so has part: feature:6717072-6717150:-1:exon
so has part: feature:6707419-6707534:-1:exon
so has part: feature:6699817-6699898:-1:exon
so has part: feature:6696745-6696925:-1:exon
so has part: feature:6695918-6695988:-1:exon
so has part: feature:6693093-6693182:-1:exon
so has part: feature:6686847-6686978:-1:exon
so has part: feature:6686207-6686408:-1:exon
so has part: feature:6682007-6682067:-1:exon
so has part: feature:6670489-6670645:-1:exon
so has part: feature:6668515-6668689:-1:exon
so has part: feature:6666765-6666877:-1:exon
so has part: feature:6666636-6666643:-1:exon

XP_032906094.1
type: Protein
SIO_000068: ncbiprotein

position:6666636:-1
position: 6666636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6725430-6725690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6724432-6724633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6718446-6718510:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6717072-6717150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6707419-6707534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6699817-6699898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6696745-6696925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6695918-6695988:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6693093-6693182:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6686847-6686978:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6686207-6686408:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6682007-6682067:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6670489-6670645:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6668515-6668689:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6666765-6666877:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6666636-6666643:-1:exon

pex11a
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: pex11a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6731424..6745790
location: region:6731424-6745790:1
so has part: feature:6731424-6745790:1:exon
subclass of: SO_0000010

116991494
type: Gene
SIO_000068: ncbigene

position:6731424:1
position: 6731424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6745790:1
position: 6745790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6731424-6745790:1:exon

pex11a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pex11a
product: peroxisomal biogenesis factor 11 alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033050125.1
SIO_010081: pex11a
subclass of: SO_0000673
so part of: pex11a
location: join(6731424..6732250,6738020..6738135,6742861..6745790)
location: region:6731424-6745790:1
so has part: feature:6731424-6732250:1:exon
so has part: feature:6738020-6738135:1:exon
so has part: feature:6742861-6745790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6731424-6732250:1:exon

position:6732250:1
position: 6732250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6738020-6738135:1:exon

position:6738020:1
position: 6738020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6738135:1
position: 6738135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6742861-6745790:1:exon

position:6742861:1
position: 6742861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pex11a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pex11a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal membrane protein 11A
translation: MDSYVKLASLSQGRDKIFRTTQYACILLNCLIHKHGSNKELAAKLKHLESNLSSGRKLFRLGNTVDAVQTARRNVQISDPVLRFCLTAISLSRALYYICDNILWSGAVGLGDIDKEKWSKRCNHYYFFSLVVSLGRDVYEVVQLMKEEVLVQKRQESKSINNLENNRAQREFDWIARIKSKAFLVLLFQIVGNNPPVLLDIVKNLCDLTLPLDKMGICKTNSGVVGFCGLLSSILSILALMHPALKLKA
SIO_010081: pex11a
subclass of: SO_0000673
so part of: pex11a
location: join(6732195..6732250,6738020..6738135,6742861..6743438)
location: region:6732195-6743438:1
so has part: feature:6732195-6732250:1:exon
so has part: feature:6738020-6738135:1:exon
so has part: feature:6742861-6743438:1:exon

XP_032906016.1
type: Protein
SIO_000068: ncbiprotein

position:6732195:1
position: 6732195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6743438:1
position: 6743438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6732195-6732250:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6738020-6738135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6742861-6743438:1:exon

LOC116991615
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991615
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6842061..6846047)
location: region:6842061-6846047:-1
so has part: feature:6842061-6846047:-1:exon
subclass of: SO_0000010

116991615
type: Gene
SIO_000068: ncbigene

position:6842061:-1
position: 6842061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6846047:-1
position: 6846047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6842061-6846047:-1:exon

LOC116991615
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116991615
product: ras-related and estrogen-regulated growth inhibitor-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033050362.1
SIO_010081: LOC116991615
subclass of: SO_0000673
so part of: LOC116991615
location: complement(join(6842061..6842730,6844968..6845044,6845141..6845194,6845864..6846047))
location: region:6842061-6846047:-1
so has part: feature:6845864-6846047:-1:exon
so has part: feature:6845141-6845194:-1:exon
so has part: feature:6844968-6845044:-1:exon
so has part: feature:6842061-6842730:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6845864-6846047:-1:exon

position:6845864:-1
position: 6845864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6845141-6845194:-1:exon

position:6845141:-1
position: 6845141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6845194:-1
position: 6845194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6844968-6845044:-1:exon

position:6844968:-1
position: 6844968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6845044:-1
position: 6845044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6842061-6842730:-1:exon

position:6842730:-1
position: 6842730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116991615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116991615
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related and estrogen-regulated growth inhibitor-like protein
translation: MWADLKIKAANGSVHSLREREALALTTIPPPSRMEANVVMLGADNVGKSALTVRFLTRRFIGEYGDIESVYNHNVTVAGRHVAFNIWDSPFAQDRLNSSCGKEKQIQWADGFVLVYSICDRASFNIVRQQIQLIKSMKDYPSTERAPIIIVGNKRDLCHCRTVSSEEGRLLALATHCGFCEISTAETYHGVLVAFHSLVDRIKESKMLTVRKPAGIKGIVRSMSAVFTRRRTDSL
SIO_010081: LOC116991615
subclass of: SO_0000673
so part of: LOC116991615
location: complement(join(6842302..6842730,6844968..6845044,6845141..6845194,6845864..6846011))
location: region:6842302-6846011:-1
so has part: feature:6845864-6846011:-1:exon
so has part: feature:6845141-6845194:-1:exon
so has part: feature:6844968-6845044:-1:exon
so has part: feature:6842302-6842730:-1:exon

XP_032906253.1
type: Protein
SIO_000068: ncbiprotein

position:6842302:-1
position: 6842302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6846011:-1
position: 6846011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6845864-6846011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6845141-6845194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6844968-6845044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6842302-6842730:-1:exon

rgma
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rgma
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7520755..7561846
location: region:7520755-7561846:1
so has part: feature:7520755-7561846:1:exon
subclass of: SO_0000010

116991720
type: Gene
SIO_000068: ncbigene

position:7520755:1
position: 7520755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7561846:1
position: 7561846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7520755-7561846:1:exon

rgma
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rgma
product: repulsive guidance molecule BMP co-receptor a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_033050597.1
SIO_010081: rgma
subclass of: SO_0000673
so part of: rgma
location: join(7520755..7521168,7539947..7540080,7551613..7552121,7560700..7561846)
location: region:7520755-7561846:1
so has part: feature:7520755-7521168:1:exon
so has part: feature:7539947-7540080:1:exon
so has part: feature:7551613-7552121:1:exon
so has part: feature:7560700-7561846:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7520755-7521168:1:exon

position:7521168:1
position: 7521168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7539947-7540080:1:exon

position:7539947:1
position: 7539947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7540080:1
position: 7540080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7551613-7552121:1:exon

position:7551613:1
position: 7551613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7552121:1
position: 7552121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7560700-7561846:1:exon

position:7560700:1
position: 7560700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rgma
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rgma
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: repulsive guidance molecule A
translation: MPQPRVSRVGESDLCATPVWAGWMGMGRRDDPSGHRILQILTIVLCLPAVSCQCRILKCNSEYLSATSGLHQGGEESVEFCVALRAYSQCTRRTARACRGDLAYHSAVHGIEDLMSQHNCSKVGPTHGPAPAQPTSPDCMVHSDAPETCNYEKSLAQQGRQANYTHCGLFGDPHLRTFSDDFQTCKVRGAWPLIDNSYLFVQVTNVAVVHSSSATAVSKITIIFKSFQECVEQKVYQAETDDLPAAFVDGSRNGGDKHGANSLWVAEKSGGQHIEIQARYIGTTVVVRQAGRYLTFAIRMPEEIMNSFEENQGLQLCLRGCPTNERMDWALLQGRGHQDVPTHRSAAAKCKEKLPVEDLYFWSCVFDLLTTGDMNFTLAAYYALEDVKTLHSNKDKFHIYHRTADLPPGNSCPEATLRHPLSFALLLLLCWICCSLPHL
SIO_010081: rgma
subclass of: SO_0000673
so part of: rgma
location: join(7521155..7521168,7539947..7540080,7551613..7552121,7560700..7561362)
location: region:7521155-7561362:1
so has part: feature:7521155-7521168:1:exon
so has part: feature:7539947-7540080:1:exon
so has part: feature:7551613-7552121:1:exon
so has part: feature:7560700-7561362:1:exon

XP_032906488.1
type: Protein
SIO_000068: ncbiprotein

position:7521155:1
position: 7521155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7561362:1
position: 7561362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7521155-7521168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7539947-7540080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7551613-7552121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7560700-7561362:1:exon

chd2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: chd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7583818..7694421)
location: region:7583818-7694421:-1
so has part: feature:7583818-7694421:-1:exon
subclass of: SO_0000010

116991495
type: Gene
SIO_000068: ncbigene

position:7583818:-1
position: 7583818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7694421:-1
position: 7694421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7583818-7694421:-1:exon

chd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: chd2
product: chromodomain helicase DNA binding protein 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033050133.1
SIO_010081: chd2
subclass of: SO_0000673
so part of: chd2
location: complement(join(7583818..7584347,7586771..7587011,7589587..7589791,7590594..7590690,7593162..7593340,7594393..7594524,7595117..7595254,7601030..7601149,7602273..7602423,7605772..7605910,7607535..7607677,7608379..7608420,7609858..7610036,7611904..7612074,7612950..7613042,7614152..7614248,7615816..7615964,7617815..7617964,7620965..7621036,7623954..7624106,7627326..7627488,7628765..7628953,7629439..7629629,7631195..7631284,7632551..7632767,7634335..7634459,7635848..7636029,7637252..7637296,7641753..7641853,7644431..7644656,7647787..7647920,7648769..7648906,7651497..7651655,7651947..7652011,7657313..7657399,7663994..7664216,7693309..7693577,7693808..7694416))
location: region:7583818-7694416:-1
so has part: feature:7693808-7694416:-1:exon
so has part: feature:7693309-7693577:-1:exon
so has part: feature:7663994-7664216:-1:exon
so has part: feature:7657313-7657399:-1:exon
so has part: feature:7651947-7652011:-1:exon
so has part: feature:7651497-7651655:-1:exon
so has part: feature:7648769-7648906:-1:exon
so has part: feature:7647787-7647920:-1:exon
so has part: feature:7644431-7644656:-1:exon
so has part: feature:7641753-7641853:-1:exon
so has part: feature:7637252-7637296:-1:exon
so has part: feature:7635848-7636029:-1:exon
so has part: feature:7634335-7634459:-1:exon
so has part: feature:7632551-7632767:-1:exon
so has part: feature:7631195-7631284:-1:exon
so has part: feature:7629439-7629629:-1:exon
so has part: feature:7628765-7628953:-1:exon
so has part: feature:7627326-7627488:-1:exon
so has part: feature:7623954-7624106:-1:exon
so has part: feature:7620965-7621036:-1:exon
so has part: feature:7617815-7617964:-1:exon
so has part: feature:7615816-7615964:-1:exon
so has part: feature:7614152-7614248:-1:exon
so has part: feature:7612950-7613042:-1:exon
so has part: feature:7611904-7612074:-1:exon
so has part: feature:7609858-7610036:-1:exon
so has part: feature:7608379-7608420:-1:exon
so has part: feature:7607535-7607677:-1:exon
so has part: feature:7605772-7605910:-1:exon
so has part: feature:7602273-7602423:-1:exon
so has part: feature:7601030-7601149:-1:exon
so has part: feature:7595117-7595254:-1:exon
so has part: feature:7594393-7594524:-1:exon
so has part: feature:7593162-7593340:-1:exon
so has part: feature:7590594-7590690:-1:exon
so has part: feature:7589587-7589791:-1:exon
so has part: feature:7586771-7587011:-1:exon
so has part: feature:7583818-7584347:-1:exon

position:7694416:-1
position: 7694416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7693808-7694416:-1:exon

position:7693808:-1
position: 7693808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7693309-7693577:-1:exon

position:7693309:-1
position: 7693309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7693577:-1
position: 7693577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7663994-7664216:-1:exon

position:7663994:-1
position: 7663994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7664216:-1
position: 7664216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7657313-7657399:-1:exon

position:7657313:-1
position: 7657313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7657399:-1
position: 7657399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7651947-7652011:-1:exon

position:7651947:-1
position: 7651947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7652011:-1
position: 7652011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7651497-7651655:-1:exon

position:7651497:-1
position: 7651497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7651655:-1
position: 7651655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7648769-7648906:-1:exon

position:7648769:-1
position: 7648769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7648906:-1
position: 7648906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7647787-7647920:-1:exon

position:7647787:-1
position: 7647787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7647920:-1
position: 7647920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7644431-7644656:-1:exon

position:7644431:-1
position: 7644431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7644656:-1
position: 7644656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7641753-7641853:-1:exon

position:7641753:-1
position: 7641753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7641853:-1
position: 7641853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7637252-7637296:-1:exon

position:7637252:-1
position: 7637252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7637296:-1
position: 7637296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7635848-7636029:-1:exon

position:7635848:-1
position: 7635848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7636029:-1
position: 7636029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7634335-7634459:-1:exon

position:7634335:-1
position: 7634335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7634459:-1
position: 7634459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7632551-7632767:-1:exon

position:7632551:-1
position: 7632551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7632767:-1
position: 7632767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7631195-7631284:-1:exon

position:7631195:-1
position: 7631195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7631284:-1
position: 7631284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7629439-7629629:-1:exon

position:7629439:-1
position: 7629439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7629629:-1
position: 7629629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7628765-7628953:-1:exon

position:7628765:-1
position: 7628765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7628953:-1
position: 7628953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7627326-7627488:-1:exon

position:7627326:-1
position: 7627326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7627488:-1
position: 7627488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7623954-7624106:-1:exon

position:7623954:-1
position: 7623954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7624106:-1
position: 7624106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7620965-7621036:-1:exon

position:7620965:-1
position: 7620965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7621036:-1
position: 7621036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7617815-7617964:-1:exon

position:7617815:-1
position: 7617815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7617964:-1
position: 7617964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7615816-7615964:-1:exon

position:7615816:-1
position: 7615816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7615964:-1
position: 7615964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7614152-7614248:-1:exon

position:7614152:-1
position: 7614152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7614248:-1
position: 7614248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7612950-7613042:-1:exon

position:7612950:-1
position: 7612950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7613042:-1
position: 7613042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7611904-7612074:-1:exon

position:7611904:-1
position: 7611904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7612074:-1
position: 7612074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7609858-7610036:-1:exon

position:7609858:-1
position: 7609858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7610036:-1
position: 7610036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7608379-7608420:-1:exon

position:7608379:-1
position: 7608379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7608420:-1
position: 7608420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7607535-7607677:-1:exon

position:7607535:-1
position: 7607535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7607677:-1
position: 7607677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:7605772-7605910:-1:exon

position:7605772:-1
position: 7605772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7605910:-1
position: 7605910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:7602273-7602423:-1:exon

position:7602273:-1
position: 7602273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7602423:-1
position: 7602423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:7601030-7601149:-1:exon

position:7601030:-1
position: 7601030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7601149:-1
position: 7601149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:7595117-7595254:-1:exon

position:7595117:-1
position: 7595117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7595254:-1
position: 7595254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:7594393-7594524:-1:exon

position:7594393:-1
position: 7594393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7594524:-1
position: 7594524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:7593162-7593340:-1:exon

position:7593162:-1
position: 7593162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7593340:-1
position: 7593340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:7590594-7590690:-1:exon

position:7590594:-1
position: 7590594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7590690:-1
position: 7590690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:7589587-7589791:-1:exon

position:7589587:-1
position: 7589587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7589791:-1
position: 7589791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:7586771-7587011:-1:exon

position:7586771:-1
position: 7586771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7587011:-1
position: 7587011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:7583818-7584347:-1:exon

position:7584347:-1
position: 7584347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

chd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: chd2
product: chromodomain helicase DNA binding protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033050129.1
SIO_010081: chd2
subclass of: SO_0000673
so part of: chd2
location: complement(join(7583818..7584347,7586771..7587011,7589587..7589791,7590594..7590690,7593162..7593340,7594393..7594524,7595117..7595254,7598006..7598137,7601030..7601149,7602273..7602423,7605772..7605910,7607535..7607677,7608379..7608420,7609858..7610036,7611904..7612074,7612950..7613042,7614152..7614248,7615816..7615964,7617815..7617964,7620965..7621036,7623954..7624106,7627326..7627488,7628765..7628953,7629439..7629629,7631195..7631284,7632551..7632767,7634335..7634459,7635848..7636029,7637252..7637296,7641753..7641853,7644431..7644656,7647787..7647920,7648769..7648906,7651497..7651655,7651947..7652011,7657313..7657399,7663994..7664216,7693309..7693577,7693808..7694416))
location: region:7583818-7694416:-1
so has part: feature:7693808-7694416:-1:exon
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chd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: chd2
product: chromodomain helicase DNA binding protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033050132.1
SIO_010081: chd2
subclass of: SO_0000673
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chd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: chd2
product: chromodomain helicase DNA binding protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033050126.1
SIO_010081: chd2
subclass of: SO_0000673
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chd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: chd2
product: chromodomain helicase DNA binding protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033050128.1
SIO_010081: chd2
subclass of: SO_0000673
so part of: chd2
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chd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: chd2
product: chromodomain helicase DNA binding protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033050131.1
SIO_010081: chd2
subclass of: SO_0000673
so part of: chd2
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chd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: chd2
product: chromodomain helicase DNA binding protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033050130.1
SIO_010081: chd2
subclass of: SO_0000673
so part of: chd2
location: complement(join(7584032..7584347,7586771..7587011,7589587..7589791,7590594..7590690,7593162..7593340,7594393..7594524,7595117..7595254,7598006..7598137,7601027..7601149,7602273..7602423,7605772..7605910,7607535..7607677,7608379..7608420,7609858..7610036,7611904..7612074,7612950..7613042,7614152..7614248,7615816..7615964,7617815..7617964,7620965..7621036,7623954..7624106,7627326..7627488,7628765..7628953,7629439..7629629,7631195..7631284,7632551..7632767,7634335..7634459,7635848..7636029,7637252..7637296,7641753..7641853,7644431..7644656,7647787..7647920,7648769..7648906,7651497..7651655,7651947..7652011,7663994..7664216,7693309..7693577,7693808..7694416))
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chd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: chd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 2 isoform X5
translation: MEQSLSECDNGIECLNNVAAASGFCKSSSGQLLNPADLLARREFDRAPRRSIATHPRVAQDKTEPPNSPGPNTMSSEGKDPEDDGSEHSNASSNLASEESNHSASGSESGSQSESEQGSESNNSSSDSSGSQSQSESESAGSKLQQTASENKDKPLSKKERIADVKKESSENSENETPRRRGRRRATNWKNAKSEIEEDEDEELEEDGDEEEEEEDDDDEAGSADSEPVRSVRARRPVTRRPMAKTRGKRQAARRGKKRRRDSSDEDDDDDDTPKRQTRKCVIKNVSYKEDDDFETDSDDLIEVTGEPALEENDDSETIEKVIDSRRGKKGAIGARTTVYAVEADGNPGADFDPEKDESEVQYLIKWKGWSYIHNTWESEESLKQQKVKGLKKLENFIKKEEDINQWLSKASPEDVEYYNCQQEMTHELNKQYRIVERVIAMKTSKSSTSHSDISSLSCHKTPPSGQPDYLCKWMGLPYIDCSWEDGALISRNFQACIDAFHNRHSSKTIPSKDCKVLKQRPRFVALKTQPSYIGSEGLELRDYQLEGVNWLAHSWCKCNSVILADEMGLGKTIQTISFLSNLFNQLTLYGPFLLVVPLSTLSSWQREFEIWEPSMNVVVYIGDVMSRSTIREYDWTHPQTKRLKFNVLITTYEILLKDKNVLGNINWAFLGVDEAHRLKNDDSLLYRTLIDFRSNHRMLITGTPLQNSLKELWSLLHFIMPEKFHSWEDFEEEHGKGRENGFQSLHRVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSASQKQYYKWILTRNYRALTRGCRGSSSSFLNIMMELKKCCNHCYLVKPCEDNDMLTSLELLHNLIKSSGKLILLDKLMIRLRERGNRVLIFSQMVRMLDILAEYMTIKHYPFQRLDGSIKGELRKQALDHFNAEASEDFCFLLSTRAGGLGINLASADTVIIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSSARPSHSTPFNKEELSAILKFGAEELFKEAEGEESEPQEMDIDEILRLAETRENEQSVSPTDELLSQFKVANFTTMENQPEVDEKQIKEWDDIIPGEQRKKIEEEARQKELEDIYMLPRSRSSTKKARANGSDSDAGSRRRRQRSSGSESETEESDDGEKRPKRRGRPRTVRRDMVDGFTDAEIRRFIKSYKKFGAPLERLEGIARDAELVDKSIADLQRLGELIHNGCVMAVKEFEEQLKENPGLEGKGPGKKRGPTIKVSGVQVNVRSILIHEDEFEALHKTIPLDPEERKKFRLSCHAKAVHFDTDWGVEEDSNLLIGIYECGYSNWEQIKMDPELQLTNKILPVNPDHKPQAKHLQSRADYLIRLLKKDMIKKAGIKQEKESKPKKRKPRVKKENKAPKLKDECGNDISSPRLSDNASEEDGELKDGSLERTPMKKKLKKKDNKENKEKGDVKKDKDGQKGKKKAKAKKDKLKADAKDKLRKSVAKGPVHITAGNDPVPIGEEGEDELDQETFSICKERMRPVKKALKQLDKPEEGLSEKEQLQHTRSCLLKIGDRITDCLKAYSDSEHVKIWRRNLWIFVSKFTEFDARKLHKLYKLAQKRRSQEEEEQKKKGNNSESRRQFKPEPSGSSRDSMNSQSHMQHGPHGPHLLPPHHQHPHHRDPYPQHNKRPFNNADRDDRQRERMYNYNSQHWPSERHHPYDQHRYKDHHFDDRRPHGDPHRNSGNYRPNNLHRKRPYNQYDDERDHRGHRDYYDRRHQDMKRRRSDEFRPQDHHNLGHQQDFRRLPDHRGPGAYHSQGPSEHYRPFHMEKPMEHKTLSSEHRSPLSQKSPHDSRSPHDHRSPLDRSLDTPDYNWNARKT
SIO_010081: chd2
subclass of: SO_0000673
so part of: chd2
location: complement(join(7584032..7584347,7586771..7587011,7589587..7589791,7590594..7590690,7593162..7593340,7594393..7594524,7595117..7595254,7598006..7598137,7601027..7601149,7602273..7602423,7605772..7605910,7607535..7607677,7608379..7608420,7609858..7610036,7611904..7612074,7612950..7613042,7614152..7614248,7615816..7615964,7617815..7617964,7620965..7621036,7623954..7624106,7627326..7627488,7628765..7628953,7629439..7629629,7631195..7631284,7632551..7632767,7634335..7634459,7635848..7636029,7637252..7637296,7641753..7641853,7644431..7644656,7647787..7647920,7648769..7648906,7651497..7651655,7651947..7652008,7663994..7664216,7693309..7693577,7693808..7693816))
location: region:7584032-7693816:-1
so has part: feature:7693808-7693816:-1:exon
so has part: feature:7693309-7693577:-1:exon
so has part: feature:7663994-7664216:-1:exon
so has part: feature:7651947-7652008:-1:exon
so has part: feature:7651497-7651655:-1:exon
so has part: feature:7648769-7648906:-1:exon
so has part: feature:7647787-7647920:-1:exon
so has part: feature:7644431-7644656:-1:exon
so has part: feature:7641753-7641853:-1:exon
so has part: feature:7637252-7637296:-1:exon
so has part: feature:7635848-7636029:-1:exon
so has part: feature:7634335-7634459:-1:exon
so has part: feature:7632551-7632767:-1:exon
so has part: feature:7631195-7631284:-1:exon
so has part: feature:7629439-7629629:-1:exon
so has part: feature:7628765-7628953:-1:exon
so has part: feature:7627326-7627488:-1:exon
so has part: feature:7623954-7624106:-1:exon
so has part: feature:7620965-7621036:-1:exon
so has part: feature:7617815-7617964:-1:exon
so has part: feature:7615816-7615964:-1:exon
so has part: feature:7614152-7614248:-1:exon
so has part: feature:7612950-7613042:-1:exon
so has part: feature:7611904-7612074:-1:exon
so has part: feature:7609858-7610036:-1:exon
so has part: feature:7608379-7608420:-1:exon
so has part: feature:7607535-7607677:-1:exon
so has part: feature:7605772-7605910:-1:exon
so has part: feature:7602273-7602423:-1:exon
so has part: feature:7601027-7601149:-1:exon
so has part: feature:7598006-7598137:-1:exon
so has part: feature:7595117-7595254:-1:exon
so has part: feature:7594393-7594524:-1:exon
so has part: feature:7593162-7593340:-1:exon
so has part: feature:7590594-7590690:-1:exon
so has part: feature:7589587-7589791:-1:exon
so has part: feature:7586771-7587011:-1:exon
so has part: feature:7584032-7584347:-1:exon

XP_032906022.1
type: Protein
SIO_000068: ncbiprotein

position:7693816:-1
position: 7693816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7693808-7693816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7693309-7693577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7663994-7664216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7651947-7652008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7651497-7651655:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7648769-7648906:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7647787-7647920:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7644431-7644656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7641753-7641853:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7637252-7637296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7635848-7636029:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7634335-7634459:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7632551-7632767:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7631195-7631284:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7629439-7629629:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7628765-7628953:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7627326-7627488:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7623954-7624106:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7620965-7621036:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7617815-7617964:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7615816-7615964:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7614152-7614248:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7612950-7613042:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7611904-7612074:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7609858-7610036:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7608379-7608420:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7607535-7607677:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7605772-7605910:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7602273-7602423:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7601027-7601149:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7598006-7598137:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7595117-7595254:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7594393-7594524:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7593162-7593340:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7590594-7590690:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7589587-7589791:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7586771-7587011:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7584032-7584347:-1:exon

chd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: chd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 2 isoform X4
translation: MEQSLSECDNGIECLNNVAAASGFCKSSSGQLLNPADLLARREFDRAPRRSIATHPRVAQDKTEPPNSPGPNTMSSEGKDPEDDGSEHSNASSNLASEESNHSASGSESGSQSESEQGSESNNSSSDSSGSQSQSESESAGSKLQQTASENKDKPLSKKERIADVKKQESSENSENETPRRRGRRRATNWKNAKSEIEEDEDEELEEDGDEEEEEEDDDDEAGSADSEPVRSVRARRPVTRRPMAKTRGKRQAARRGKKRRRDSSDEDDDDDDTPKRQTRKCVIKNVSYKEDDDFETDSDDLIEVTGEPALEENDDSETIEKVIDSRRGKKGAIGARTTVYAVEADGNPGADFDPEKDESEVQYLIKWKGWSYIHNTWESEESLKQQKVKGLKKLENFIKKEEDINQWLSKASPEDVEYYNCQQEMTHELNKQYRIVERVIAMKTSKSSTSHSDISSLSCHKTPPSGQPDYLCKWMGLPYIDCSWEDGALISRNFQACIDAFHNRHSSKTIPSKDCKVLKQRPRFVALKTQPSYIGSEGLELRDYQLEGVNWLAHSWCKCNSVILADEMGLGKTIQTISFLSNLFNQLTLYGPFLLVVPLSTLSSWQREFEIWEPSMNVVVYIGDVMSRSTIREYDWTHPQTKRLKFNVLITTYEILLKDKNVLGNINWAFLGVDEAHRLKNDDSLLYRTLIDFRSNHRMLITGTPLQNSLKELWSLLHFIMPEKFHSWEDFEEEHGKGRENGFQSLHRVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSASQKQYYKWILTRNYRALTRGCRGSSSSFLNIMMELKKCCNHCYLVKPCEDNDMLTSLELLHNLIKSSGKLILLDKLMIRLRERGNRVLIFSQMVRMLDILAEYMTIKHYPFQRLDGSIKGELRKQALDHFNAEASEDFCFLLSTRAGGLGINLASADTVIIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSSARPSHSTPFNKEELSAILKFGAEELFKEAEGEESEPQEMDIDEILRLAETRENEQSVSPTDELLSQFKVANFTTMENQPEVDEKQIKEWDDIIPGEQRKKIEEEARQKELEDIYMLPRSRSSTKKARANGSDSDAGSRRRRQRSSGSESETEESDDGEKRPKRRGRPRTVRRDMVDGFTDAEIRRFIKSYKKFGAPLERLEGIARDAELVDKSIADLQRLGELIHNGCVMAVKEFEEQLKENPGLEGKGPGKKRGPTIKVSGVQVNVRSILIHEDEFEALHKTIPLDPEERKKFRLSCHAKAVHFDTDWGVEEDSNLLIGIYECGYSNWEQIKMDPELQLTNKILPVNPDHKPQAKHLQSRADYLIRLLKKDMIKKAGIKQEKESKPKKRKPRVKKENKAPKLKDECGNDISSPRLSDNASEEDGELKDGSLERTPMKKKLKKKDNKENKEKGDVKKDKDGQKGKKKAKAKKDKLKADAKDKLRKSVAKGPVHITAGNDPVPIGEEGEDELDQETFSICKERMRPVKKALKQLDKPEEGLSEKEQLQHTRSCLLKIGDRITDCLKAYSDSEHVKIWRRNLWIFVSKFTEFDARKLHKLYKLAQKRRSQEEEEQKKKGNNSESRRQFKPEPSGSSRDSMNSQSHMQHGPHGPHLLPPHHQHPHHRDPYPQHNKRPFNNADRDDRQRERMYNYNSQHWPSERHHPYDQHRYKDHHFDDRRPHGDPHRNSGNYRPNNLHRKRPYNQYDDERDHRGHRDYYDRRHQDMKRRRSDEFRPQDHHNLGHQQDFRRLPDHRGPGAYHSQGPSEHYRPFHMEKPMEHKTLSSEHRSPLSQKSPHDSRSPHDHRSPLDRSLDTPDYNWNARKT
SIO_010081: chd2
subclass of: SO_0000673
so part of: chd2
location: complement(join(7584032..7584347,7586771..7587011,7589587..7589791,7590594..7590690,7593162..7593340,7594393..7594524,7595117..7595254,7598006..7598137,7601027..7601149,7602273..7602423,7605772..7605910,7607535..7607677,7608379..7608420,7609858..7610036,7611904..7612074,7612950..7613042,7614152..7614248,7615816..7615964,7617815..7617964,7620965..7621036,7623954..7624106,7627326..7627488,7628765..7628953,7629439..7629629,7631195..7631284,7632551..7632767,7634335..7634459,7635848..7636029,7637252..7637296,7641753..7641853,7644431..7644656,7647787..7647920,7648769..7648906,7651497..7651655,7651947..7652011,7663994..7664216,7693309..7693577,7693808..7693816))
location: region:7584032-7693816:-1
so has part: feature:7693808-7693816:-1:exon
so has part: feature:7693309-7693577:-1:exon
so has part: feature:7663994-7664216:-1:exon
so has part: feature:7651947-7652011:-1:exon
so has part: feature:7651497-7651655:-1:exon
so has part: feature:7648769-7648906:-1:exon
so has part: feature:7647787-7647920:-1:exon
so has part: feature:7644431-7644656:-1:exon
so has part: feature:7641753-7641853:-1:exon
so has part: feature:7637252-7637296:-1:exon
so has part: feature:7635848-7636029:-1:exon
so has part: feature:7634335-7634459:-1:exon
so has part: feature:7632551-7632767:-1:exon
so has part: feature:7631195-7631284:-1:exon
so has part: feature:7629439-7629629:-1:exon
so has part: feature:7628765-7628953:-1:exon
so has part: feature:7627326-7627488:-1:exon
so has part: feature:7623954-7624106:-1:exon
so has part: feature:7620965-7621036:-1:exon
so has part: feature:7617815-7617964:-1:exon
so has part: feature:7615816-7615964:-1:exon
so has part: feature:7614152-7614248:-1:exon
so has part: feature:7612950-7613042:-1:exon
so has part: feature:7611904-7612074:-1:exon
so has part: feature:7609858-7610036:-1:exon
so has part: feature:7608379-7608420:-1:exon
so has part: feature:7607535-7607677:-1:exon
so has part: feature:7605772-7605910:-1:exon
so has part: feature:7602273-7602423:-1:exon
so has part: feature:7601027-7601149:-1:exon
so has part: feature:7598006-7598137:-1:exon
so has part: feature:7595117-7595254:-1:exon
so has part: feature:7594393-7594524:-1:exon
so has part: feature:7593162-7593340:-1:exon
so has part: feature:7590594-7590690:-1:exon
so has part: feature:7589587-7589791:-1:exon
so has part: feature:7586771-7587011:-1:exon
so has part: feature:7584032-7584347:-1:exon

XP_032906021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7693808-7693816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7693309-7693577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7663994-7664216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7651947-7652011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7651497-7651655:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7648769-7648906:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7647787-7647920:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7644431-7644656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7641753-7641853:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7637252-7637296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7635848-7636029:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7634335-7634459:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7632551-7632767:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7631195-7631284:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7629439-7629629:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7628765-7628953:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7627326-7627488:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7623954-7624106:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7620965-7621036:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7617815-7617964:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7615816-7615964:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7614152-7614248:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7612950-7613042:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7611904-7612074:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7609858-7610036:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7608379-7608420:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7607535-7607677:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7605772-7605910:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7602273-7602423:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7601027-7601149:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7598006-7598137:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7595117-7595254:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7594393-7594524:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7593162-7593340:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7590594-7590690:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7589587-7589791:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7586771-7587011:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7584032-7584347:-1:exon

chd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: chd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 2 isoform X2
translation: MEQSLSECDNGIECLNNVAAASGFCKSSSGQLLNPADLLARREFDRAPRRSIATHPRVAQDKTEPPNSPGPNTMSSEGKDPEDDGSEHSNASSNLASEESNHSASGSESGSQSESEQGSESNNSSSDSSGSQSQSESESAGSKLQQTASENKDKPLSKKERIADVKKMWEEYPDVYGVRRSNRSRQEPARLNAGAEESSENSENETPRRRGRRRATNWKNAKSEIEEDEDEELEEDGDEEEEEEDDDDEAGSADSEPVRSVRARRPVTRRPMAKTRGKRQAARRGKKRRRDSSDEDDDDDDTPKRQTRKCVIKNVSYKEDDDFETDSDDLIEVTGEPALEENDDSETIEKVIDSRRGKKGAIGARTTVYAVEADGNPGADFDPEKDESEVQYLIKWKGWSYIHNTWESEESLKQQKVKGLKKLENFIKKEEDINQWLSKASPEDVEYYNCQQEMTHELNKQYRIVERVIAMKTSKSSTSHSDISSLSCHKTPPSGQPDYLCKWMGLPYIDCSWEDGALISRNFQACIDAFHNRHSSKTIPSKDCKVLKQRPRFVALKTQPSYIGSEGLELRDYQLEGVNWLAHSWCKCNSVILADEMGLGKTIQTISFLSNLFNQLTLYGPFLLVVPLSTLSSWQREFEIWEPSMNVVVYIGDVMSRSTIREYDWTHPQTKRLKFNVLITTYEILLKDKNVLGNINWAFLGVDEAHRLKNDDSLLYRTLIDFRSNHRMLITGTPLQNSLKELWSLLHFIMPEKFHSWEDFEEEHGKGRENGFQSLHRVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSASQKQYYKWILTRNYRALTRGCRGSSSSFLNIMMELKKCCNHCYLVKPCEDNDMLTSLELLHNLIKSSGKLILLDKLMIRLRERGNRVLIFSQMVRMLDILAEYMTIKHYPFQRLDGSIKGELRKQALDHFNAEASEDFCFLLSTRAGGLGINLASADTVIIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSSARPSHSTPFNKEELSAILKFGAEELFKEAEGEESEPQEMDIDEILRLAETRENEQSVSPTDELLSQFKVANFTTMENQPEVDEKQIKEWDDIIPGEQRKKIEEEARQKELEDIYMLPRSRSSTKKARANGSDSDAGSRRRRQRSSGSESETEESDDGEKRPKRRGRPRTVRRDMVDGFTDAEIRRFIKSYKKFGAPLERLEGIARDAELVDKSIADLQRLGELIHNGCVMAVKEFEEQLKENPGLEGKGPGKKRGPTIKVSGVQVNVRSILIHEDEFEALHKTIPLDPEERKKFRLSCHAKAVHFDTDWGVEEDSNLLIGIYECGYSNWEQIKMDPELQLTNKILPVNPDHKPQAKHLQSRADYLIRLLKKDMIKKAGIKQEKESKPKKRKPRVKKENKAPKLKDECGNDISSPRLSDNASEEDGELKDGSLERTPMKKKLKKKDNKENKEKGDVKKDKDGQKGKKKAKAKKDKLKADAKDKLRKSVAKGPVHITAGNDPVPIGEEGEDELDQETFSICKERMRPVKKALKQLDKPEEGLSEKEQLQHTRSCLLKIGDRITDCLKAYSDSEHVKIWRRNLWIFVSKFTEFDARKLHKLYKLAQKRRSQEEEEQKKKGNNSESRRQFKPEPSGSSRDSMNSQSHMQHGPHGPHLLPPHHQHPHHRDPYPQHNKRPFNNADRDDRQRERMYNYNSQHWPSERHHPYDQHRYKDHHFDDRRPHGDPHRNSGNYRPNNLHRKRPYNQYDDERDHRGHRDYYDRRHQDMKRRRSDEFRPQDHHNLGHQQDFRRLPDHRGPGAYHSQGPSEHYRPFHMEKPMEHKTLSSEHRSPLSQKSPHDSRSPHDHRSPLDRSLDTPDYNWNARKT
SIO_010081: chd2
subclass of: SO_0000673
so part of: chd2
location: complement(join(7584032..7584347,7586771..7587011,7589587..7589791,7590594..7590690,7593162..7593340,7594393..7594524,7595117..7595254,7598006..7598137,7601027..7601149,7602273..7602423,7605772..7605910,7607535..7607677,7608379..7608420,7609858..7610036,7611904..7612074,7612950..7613042,7614152..7614248,7615816..7615964,7617815..7617964,7620965..7621036,7623954..7624106,7627326..7627488,7628765..7628953,7629439..7629629,7631195..7631284,7632551..7632767,7634335..7634459,7635848..7636029,7637252..7637296,7641753..7641853,7644431..7644656,7647787..7647920,7648769..7648906,7651497..7651655,7651947..7652008,7657313..7657399,7663994..7664216,7693309..7693577,7693808..7693816))
location: region:7584032-7693816:-1
so has part: feature:7693808-7693816:-1:exon
so has part: feature:7693309-7693577:-1:exon
so has part: feature:7663994-7664216:-1:exon
so has part: feature:7657313-7657399:-1:exon
so has part: feature:7651947-7652008:-1:exon
so has part: feature:7651497-7651655:-1:exon
so has part: feature:7648769-7648906:-1:exon
so has part: feature:7647787-7647920:-1:exon
so has part: feature:7644431-7644656:-1:exon
so has part: feature:7641753-7641853:-1:exon
so has part: feature:7637252-7637296:-1:exon
so has part: feature:7635848-7636029:-1:exon
so has part: feature:7634335-7634459:-1:exon
so has part: feature:7632551-7632767:-1:exon
so has part: feature:7631195-7631284:-1:exon
so has part: feature:7629439-7629629:-1:exon
so has part: feature:7628765-7628953:-1:exon
so has part: feature:7627326-7627488:-1:exon
so has part: feature:7623954-7624106:-1:exon
so has part: feature:7620965-7621036:-1:exon
so has part: feature:7617815-7617964:-1:exon
so has part: feature:7615816-7615964:-1:exon
so has part: feature:7614152-7614248:-1:exon
so has part: feature:7612950-7613042:-1:exon
so has part: feature:7611904-7612074:-1:exon
so has part: feature:7609858-7610036:-1:exon
so has part: feature:7608379-7608420:-1:exon
so has part: feature:7607535-7607677:-1:exon
so has part: feature:7605772-7605910:-1:exon
so has part: feature:7602273-7602423:-1:exon
so has part: feature:7601027-7601149:-1:exon
so has part: feature:7598006-7598137:-1:exon
so has part: feature:7595117-7595254:-1:exon
so has part: feature:7594393-7594524:-1:exon
so has part: feature:7593162-7593340:-1:exon
so has part: feature:7590594-7590690:-1:exon
so has part: feature:7589587-7589791:-1:exon
so has part: feature:7586771-7587011:-1:exon
so has part: feature:7584032-7584347:-1:exon

XP_032906019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7693808-7693816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7693309-7693577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7663994-7664216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7657313-7657399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7651947-7652008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7651497-7651655:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7648769-7648906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7647787-7647920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7644431-7644656:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7641753-7641853:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7637252-7637296:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7635848-7636029:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7634335-7634459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7632551-7632767:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7631195-7631284:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7629439-7629629:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7628765-7628953:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7627326-7627488:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7623954-7624106:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7620965-7621036:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7617815-7617964:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7615816-7615964:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7614152-7614248:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7612950-7613042:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7611904-7612074:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7609858-7610036:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7608379-7608420:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7607535-7607677:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7605772-7605910:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7602273-7602423:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7601027-7601149:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7598006-7598137:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7595117-7595254:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7594393-7594524:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7593162-7593340:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7590594-7590690:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7589587-7589791:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7586771-7587011:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7584032-7584347:-1:exon

chd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: chd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 2 isoform X7
translation: MEQSLSECDNGIECLNNVAAASGFCKSSSGQLLNPADLLARREFDRAPRRSIATHPRVAQDKTEPPNSPGPNTMSSEGKDPEDDGSEHSNASSNLASEESNHSASGSESGSQSESEQGSESNNSSSDSSGSQSQSESESAGSKLQQTASENKDKPLSKKERIADVKKMWEEYPDVYGVRRSNRSRQEPARLNAGAEQESSENSENETPRRRGRRRATNWKNAKSEIEEDEDEELEEDGDEEEEEEDDDDEAGSADSEPVRSVRARRPVTRRPMAKTRGKRQAARRGKKRRRDSSDEDDDDDDTPKRQTRKCVIKNVSYKEDDDFETDSDDLIEVTGEPALEENDDSETIEKVIDSRRGKKGAIGARTTVYAVEADGNPGADFDPEKDESEVQYLIKWKGWSYIHNTWESEESLKQQKVKGLKKLENFIKKEEDINQWLSKASPEDVEYYNCQQEMTHELNKQYRIVERVIAMKTSKSSTSHSDISSLSCHKTPPSGQPDYLCKWMGLPYIDCSWEDGALISRNFQACIDAFHNRHSSKTIPSKDCKVLKQRPRFVALKTQPSYIGSEGLELRDYQLEGVNWLAHSWCKCNSVILADEMGLGKTIQTISFLSNLFNQLTLYGPFLLVVPLSTLSSWQREFEIWEPSMNVVVYIGDVMSRSTIREYDWTHPQTKRLKFNVLITTYEILLKDKNVLGNINWAFLGVDEAHRLKNDDSLLYRTLIDFRSNHRMLITGTPLQNSLKELWSLLHFIMPEKFHSWEDFEEEHGKGRENGFQSLHRVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSASQKQYYKWILTRNYRALTRGCRGSSSSFLNIMMELKKCCNHCYLVKPCEDNDMLTSLELLHNLIKSSGKLILLDKLMIRLRERGNRVLIFSQMVRMLDILAEYMTIKHYPFQRLDGSIKGELRKQALDHFNAEASEDFCFLLSTRAGGLGINLASADTVIIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSSARPSHSTPFNKEELSAILKFGAEELFKEAEGEESEPQEMDIDEILRLAETRENEQSVSPTDELLSQFKVANFTTMENQPEVDEKQIKEWDDIIPGEQRKKIEEEARQKELEDIYMLPRSRSSTKKARANGSDSDAGSRRRRQRSSGSESETEESDDGEKRPKRRGRPRTVRRDMVDGFTDAEIRRFIKSYKKFGAPLERLEGIARDAELVDKSIADLQRLGELIHNGCVMAVKEFEEQLKENPGLEGKGPGKKRGPTIKVSGVQVNVRSILIHEDEFEALHKTIPLDPEERKKFRLSCHAKAVHFDTDWGVEEDSNLLIGIYECGYSNWEQIKMDPELQLTNKILPVNPDHKPQAKHLQSRADYLIRLLKKDMIKKAGIKQEKDGSLERTPMKKKLKKKDNKENKEKGDVKKDKDGQKGKKKAKAKKDKLKADAKDKLRKSVAKGPVHITAGNDPVPIGEEGEDELDQETFSICKERMRPVKKALKQLDKPEEGLSEKEQLQHTRSCLLKIGDRITDCLKAYSDSEHVKIWRRNLWIFVSKFTEFDARKLHKLYKLAQKRRSQEEEEQKKKGNNSESRRQFKPEPSGSSRDSMNSQSHMQHGPHGPHLLPPHHQHPHHRDPYPQHNKRPFNNADRDDRQRERMYNYNSQHWPSERHHPYDQHRYKDHHFDDRRPHGDPHRNSGNYRPNNLHRKRPYNQYDDERDHRGHRDYYDRRHQDMKRRRSDEFRPQDHHNLGHQQDFRRLPDHRGPGAYHSQGPSEHYRPFHMEKPMEHKTLSSEHRSPLSQKSPHDSRSPHDHRSPLDRSLDTPDYNWNARKT
SIO_010081: chd2
subclass of: SO_0000673
so part of: chd2
location: complement(join(7584032..7584347,7586771..7587011,7589587..7589791,7590594..7590690,7593162..7593340,7594393..7594524,7595117..7595254,7601030..7601149,7602273..7602423,7605772..7605910,7607535..7607677,7608379..7608420,7609858..7610036,7611904..7612074,7612950..7613042,7614152..7614248,7615816..7615964,7617815..7617964,7620965..7621036,7623954..7624106,7627326..7627488,7628765..7628953,7629439..7629629,7631195..7631284,7632551..7632767,7634335..7634459,7635848..7636029,7637252..7637296,7641753..7641853,7644431..7644656,7647787..7647920,7648769..7648906,7651497..7651655,7651947..7652011,7657313..7657399,7663994..7664216,7693309..7693577,7693808..7693816))
location: region:7584032-7693816:-1
so has part: feature:7693808-7693816:-1:exon
so has part: feature:7693309-7693577:-1:exon
so has part: feature:7663994-7664216:-1:exon
so has part: feature:7657313-7657399:-1:exon
so has part: feature:7651947-7652011:-1:exon
so has part: feature:7651497-7651655:-1:exon
so has part: feature:7648769-7648906:-1:exon
so has part: feature:7647787-7647920:-1:exon
so has part: feature:7644431-7644656:-1:exon
so has part: feature:7641753-7641853:-1:exon
so has part: feature:7637252-7637296:-1:exon
so has part: feature:7635848-7636029:-1:exon
so has part: feature:7634335-7634459:-1:exon
so has part: feature:7632551-7632767:-1:exon
so has part: feature:7631195-7631284:-1:exon
so has part: feature:7629439-7629629:-1:exon
so has part: feature:7628765-7628953:-1:exon
so has part: feature:7627326-7627488:-1:exon
so has part: feature:7623954-7624106:-1:exon
so has part: feature:7620965-7621036:-1:exon
so has part: feature:7617815-7617964:-1:exon
so has part: feature:7615816-7615964:-1:exon
so has part: feature:7614152-7614248:-1:exon
so has part: feature:7612950-7613042:-1:exon
so has part: feature:7611904-7612074:-1:exon
so has part: feature:7609858-7610036:-1:exon
so has part: feature:7608379-7608420:-1:exon
so has part: feature:7607535-7607677:-1:exon
so has part: feature:7605772-7605910:-1:exon
so has part: feature:7602273-7602423:-1:exon
so has part: feature:7601030-7601149:-1:exon
so has part: feature:7595117-7595254:-1:exon
so has part: feature:7594393-7594524:-1:exon
so has part: feature:7593162-7593340:-1:exon
so has part: feature:7590594-7590690:-1:exon
so has part: feature:7589587-7589791:-1:exon
so has part: feature:7586771-7587011:-1:exon
so has part: feature:7584032-7584347:-1:exon

XP_032906024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7693808-7693816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7693309-7693577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7663994-7664216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7657313-7657399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7651947-7652011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7651497-7651655:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7648769-7648906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7647787-7647920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7644431-7644656:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7641753-7641853:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7637252-7637296:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7635848-7636029:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7634335-7634459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7632551-7632767:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7631195-7631284:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7629439-7629629:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7628765-7628953:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7627326-7627488:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7623954-7624106:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7620965-7621036:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7617815-7617964:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7615816-7615964:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7614152-7614248:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7612950-7613042:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7611904-7612074:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7609858-7610036:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7608379-7608420:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7607535-7607677:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7605772-7605910:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7602273-7602423:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7601030-7601149:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7595117-7595254:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7594393-7594524:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7593162-7593340:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7590594-7590690:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7589587-7589791:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7586771-7587011:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7584032-7584347:-1:exon

chd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: chd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 2 isoform X3
translation: MEQSLSECDNGIECLNNVAAASGFCKSSSGQLLNPADLLARREFDRAPRRSIATHPRVAQDKTEPPNSPGPNTMSSEGKDPEDDGSEHSNASSNLASEESNHSASGSESGSQSESEQGSESNNSSSDSSGSQSQSESESAGSKLQQTASENKDKPLSKKERIADVKKMWEEYPDVYGVRRSNRSRQEPARLNAGAEQESSENSENETPRRRGRRRATNWKNAKSEIEEDEDEELEEDGDEEEEEEDDDDEAGSADSEPVRSVRARRPVTRRPMAKTRGKRQAARRGKKRRRDSSDEDDDDDDTPKRQTRKCVIKNVSYKEDDDFETDSDDLIEVTGEPALEENDDSETIEKVIDSRRGKKGAIGARTTVYAVEADGNPGADFDPEKDESEVQYLIKWKGWSYIHNTWESEESLKQQKVKGLKKLENFIKKEEDINQWLSKASPEDVEYYNCQQEMTHELNKQYRIVERVIAMKTSKSSTSHSDISSLSCHKTPPSGQPDYLCKWMGLPYIDCSWEDGALISRNFQACIDAFHNRHSSKTIPSKDCKVLKQRPRFVALKTQPSYIGSEGLELRDYQLEGVNWLAHSWCKCNSVILADEMGLGKTIQTISFLSNLFNQLTLYGPFLLVVPLSTLSSWQREFEIWEPSMNVVVYIGDVMSRSTIREYDWTHPQTKRLKFNVLITTYEILLKDKNVLGNINWAFLGVDEAHRLKNDDSLLYRTLIDFRSNHRMLITGTPLQNSLKELWSLLHFIMPEKFHSWEDFEEEHGKGRENGFQSLHRVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSASQKQYYKWILTRNYRALTRGCRGSSSSFLNIMMELKKCCNHCYLVKPCEDNDMLTSLELLHNLIKSSGKLILLDKLMIRLRERGNRVLIFSQMVRMLDILAEYMTIKHYPFQRLDGSIKGELRKQALDHFNAEASEDFCFLLSTRAGGLGINLASADTVIIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSSARPSHSTPFNKEELSAILKFGAEELFKEAEGEESEPQEMDIDEILRLAETRENEQSVSPTDELLSQFKVANFTTMENQPEVDEKQIKEWDDIIPGEQRKKIEEEARQKELEDIYMLPRSRSSTKKARANGSDSDAGSRRRRQRSSGSESETEESDDGEKRPKRRGRPRTVRRDMVDGFTDAEIRRFIKSYKKFGAPLERLEGIARDAELVDKSIADLQRLGELIHNGCVMAVKEFEEQLKENPGLEGKGPGKKRGPTIKVSGVQVNVRSILIHEDEFEALHKTIPLDPEERKKFRLSCHAKAVHFDTDWGVEEDSNLLIGIYECGYSNWEQIKMDPELQLTNKILPVNPDHKPQAKHLQSRADYLIRLLKKDMIKKAGIKQEKSKPKKRKPRVKKENKAPKLKDECGNDISSPRLSDNASEEDGELKDGSLERTPMKKKLKKKDNKENKEKGDVKKDKDGQKGKKKAKAKKDKLKADAKDKLRKSVAKGPVHITAGNDPVPIGEEGEDELDQETFSICKERMRPVKKALKQLDKPEEGLSEKEQLQHTRSCLLKIGDRITDCLKAYSDSEHVKIWRRNLWIFVSKFTEFDARKLHKLYKLAQKRRSQEEEEQKKKGNNSESRRQFKPEPSGSSRDSMNSQSHMQHGPHGPHLLPPHHQHPHHRDPYPQHNKRPFNNADRDDRQRERMYNYNSQHWPSERHHPYDQHRYKDHHFDDRRPHGDPHRNSGNYRPNNLHRKRPYNQYDDERDHRGHRDYYDRRHQDMKRRRSDEFRPQDHHNLGHQQDFRRLPDHRGPGAYHSQGPSEHYRPFHMEKPMEHKTLSSEHRSPLSQKSPHDSRSPHDHRSPLDRSLDTPDYNWNARKT
SIO_010081: chd2
subclass of: SO_0000673
so part of: chd2
location: complement(join(7584032..7584347,7586771..7587011,7589587..7589791,7590594..7590690,7593162..7593340,7594393..7594524,7595117..7595254,7598006..7598137,7601030..7601149,7602273..7602423,7605772..7605910,7607535..7607677,7608379..7608420,7609858..7610036,7611904..7612074,7612950..7613042,7614152..7614248,7615816..7615964,7617815..7617964,7620965..7621036,7623954..7624106,7627326..7627488,7628765..7628953,7629439..7629629,7631195..7631284,7632551..7632767,7634335..7634459,7635848..7636029,7637252..7637296,7641753..7641853,7644431..7644656,7647787..7647920,7648769..7648906,7651497..7651655,7651947..7652011,7657313..7657399,7663994..7664216,7693309..7693577,7693808..7693816))
location: region:7584032-7693816:-1
so has part: feature:7693808-7693816:-1:exon
so has part: feature:7693309-7693577:-1:exon
so has part: feature:7663994-7664216:-1:exon
so has part: feature:7657313-7657399:-1:exon
so has part: feature:7651947-7652011:-1:exon
so has part: feature:7651497-7651655:-1:exon
so has part: feature:7648769-7648906:-1:exon
so has part: feature:7647787-7647920:-1:exon
so has part: feature:7644431-7644656:-1:exon
so has part: feature:7641753-7641853:-1:exon
so has part: feature:7637252-7637296:-1:exon
so has part: feature:7635848-7636029:-1:exon
so has part: feature:7634335-7634459:-1:exon
so has part: feature:7632551-7632767:-1:exon
so has part: feature:7631195-7631284:-1:exon
so has part: feature:7629439-7629629:-1:exon
so has part: feature:7628765-7628953:-1:exon
so has part: feature:7627326-7627488:-1:exon
so has part: feature:7623954-7624106:-1:exon
so has part: feature:7620965-7621036:-1:exon
so has part: feature:7617815-7617964:-1:exon
so has part: feature:7615816-7615964:-1:exon
so has part: feature:7614152-7614248:-1:exon
so has part: feature:7612950-7613042:-1:exon
so has part: feature:7611904-7612074:-1:exon
so has part: feature:7609858-7610036:-1:exon
so has part: feature:7608379-7608420:-1:exon
so has part: feature:7607535-7607677:-1:exon
so has part: feature:7605772-7605910:-1:exon
so has part: feature:7602273-7602423:-1:exon
so has part: feature:7601030-7601149:-1:exon
so has part: feature:7598006-7598137:-1:exon
so has part: feature:7595117-7595254:-1:exon
so has part: feature:7594393-7594524:-1:exon
so has part: feature:7593162-7593340:-1:exon
so has part: feature:7590594-7590690:-1:exon
so has part: feature:7589587-7589791:-1:exon
so has part: feature:7586771-7587011:-1:exon
so has part: feature:7584032-7584347:-1:exon

XP_032906020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7693808-7693816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7693309-7693577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7663994-7664216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7657313-7657399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7651947-7652011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7651497-7651655:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7648769-7648906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7647787-7647920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7644431-7644656:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7641753-7641853:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7637252-7637296:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7635848-7636029:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7634335-7634459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7632551-7632767:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7631195-7631284:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7629439-7629629:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7628765-7628953:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7627326-7627488:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7623954-7624106:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7620965-7621036:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7617815-7617964:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7615816-7615964:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7614152-7614248:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7612950-7613042:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7611904-7612074:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7609858-7610036:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7608379-7608420:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7607535-7607677:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7605772-7605910:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7602273-7602423:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7601030-7601149:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7598006-7598137:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7595117-7595254:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7594393-7594524:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7593162-7593340:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7590594-7590690:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7589587-7589791:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7586771-7587011:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7584032-7584347:-1:exon

chd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: chd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 2 isoform X6
translation: MEQSLSECDNGIECLNNVAAASGFCKSSSGQLLNPADLLARREFDRAPRRSIATHPRVAQDKTEPPNSPGPNTMSSEGKDPEDDGSEHSNASSNLASEESNHSASGSESGSQSESEQGSESNNSSSDSSGSQSQSESESAGSKLQQTASENKDKPLSKKERIADVKKMWEEYPDVYGVRRSNRSRQEPARLNAGAEQESSENSENETPRRRGRRRATNWKNAKSEIEEDEDEELEEDGDEEEEEEDDDDEAGSADSEPVRSVRARRPVTRRPMAKTRGKRQAARRGKKRRRDSSDEDDDDDDTPKRQTRKCVIKNVSYKEDDDFETDSDDLIEVTGEPALEENDDSETIEKVIDSRRGKKGAIGARTTVYAVEADGNPGADFDPEKDESEVQYLIKWKGWSYIHNTWESEESLKQQKVKGLKKLENFIKKEEDINQWLSKASPEDVEYYNCQQEMTHELNKQYRIVERVIAMKTSKSSTSHSDISSLSCHKTPPSGQPDYLCKWMGLPYIDCSWEDGALISRNFQACIDAFHNRHSSKTIPSKDCKVLKQRPRFVALKTQPSYIGSEGLELRDYQLEGVNWLAHSWCKCNSVILADEMGLGKTIQTISFLSNLFNQLTLYGPFLLVVPLSTLSSWQREFEIWEPSMNVVVYIGDVMSRSTIREYDWTHPQTKRLKFNVLITTYEILLKDKNVLGNINWAFLGVDEAHRLKNDDSLLYRTLIDFRSNHRMLITGTPLQNSLKELWSLLHFIMPEKFHSWEDFEEEHGKGRENGFQSLHRVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSASQKQYYKWILTRNYRALTRGCRGSSSSFLNIMMELKKCCNHCYLVKPCEDNDMLTSLELLHNLIKSSGKLILLDKLMIRLRERGNRVLIFSQMVRMLDILAEYMTIKHYPFQRLDGSIKGELRKQALDHFNAEASEDFCFLLSTRAGGLGINLASADTVIIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSSARPSHSTPFNKEELSAILKFGAEELFKEAEGEESEPQEMDIDEILRLAETRENEQSVSPTDELLSQFKVANFTTMENQPEVDEKQIKEWDDIIPGEQRKKIEEEARQKELEDIYMLPRSRSSTKKARANGSDSDAGSRRRRQRSSGSESETEESDDGEKRPKRRGRPRTVRRDMVDGFTDAEIRRFIKSYKKFGAPLERLEGIARDAELVDKSIADLQRLGELIHNGCVMAVKEFEEQLKENPGLEGKGPGKKRGPTIKVSGVQVNVRSILIHEDEFEALHKTIPLDPEERKKFRLSCHAKAVHFDTDWGVEEDSNLLIGIYECGYSNWEQIKMDPELQLTNKILPVNPDHKPQAKHLQSRADYLIRLLKKDMIKKAGIKQEKEDGSLERTPMKKKLKKKDNKENKEKGDVKKDKDGQKGKKKAKAKKDKLKADAKDKLRKSVAKGPVHITAGNDPVPIGEEGEDELDQETFSICKERMRPVKKALKQLDKPEEGLSEKEQLQHTRSCLLKIGDRITDCLKAYSDSEHVKIWRRNLWIFVSKFTEFDARKLHKLYKLAQKRRSQEEEEQKKKGNNSESRRQFKPEPSGSSRDSMNSQSHMQHGPHGPHLLPPHHQHPHHRDPYPQHNKRPFNNADRDDRQRERMYNYNSQHWPSERHHPYDQHRYKDHHFDDRRPHGDPHRNSGNYRPNNLHRKRPYNQYDDERDHRGHRDYYDRRHQDMKRRRSDEFRPQDHHNLGHQQDFRRLPDHRGPGAYHSQGPSEHYRPFHMEKPMEHKTLSSEHRSPLSQKSPHDSRSPHDHRSPLDRSLDTPDYNWNARKT
SIO_010081: chd2
subclass of: SO_0000673
so part of: chd2
location: complement(join(7584032..7584347,7586771..7587011,7589587..7589791,7590594..7590690,7593162..7593340,7594393..7594524,7595117..7595254,7601027..7601149,7602273..7602423,7605772..7605910,7607535..7607677,7608379..7608420,7609858..7610036,7611904..7612074,7612950..7613042,7614152..7614248,7615816..7615964,7617815..7617964,7620965..7621036,7623954..7624106,7627326..7627488,7628765..7628953,7629439..7629629,7631195..7631284,7632551..7632767,7634335..7634459,7635848..7636029,7637252..7637296,7641753..7641853,7644431..7644656,7647787..7647920,7648769..7648906,7651497..7651655,7651947..7652011,7657313..7657399,7663994..7664216,7693309..7693577,7693808..7693816))
location: region:7584032-7693816:-1
so has part: feature:7693808-7693816:-1:exon
so has part: feature:7693309-7693577:-1:exon
so has part: feature:7663994-7664216:-1:exon
so has part: feature:7657313-7657399:-1:exon
so has part: feature:7651947-7652011:-1:exon
so has part: feature:7651497-7651655:-1:exon
so has part: feature:7648769-7648906:-1:exon
so has part: feature:7647787-7647920:-1:exon
so has part: feature:7644431-7644656:-1:exon
so has part: feature:7641753-7641853:-1:exon
so has part: feature:7637252-7637296:-1:exon
so has part: feature:7635848-7636029:-1:exon
so has part: feature:7634335-7634459:-1:exon
so has part: feature:7632551-7632767:-1:exon
so has part: feature:7631195-7631284:-1:exon
so has part: feature:7629439-7629629:-1:exon
so has part: feature:7628765-7628953:-1:exon
so has part: feature:7627326-7627488:-1:exon
so has part: feature:7623954-7624106:-1:exon
so has part: feature:7620965-7621036:-1:exon
so has part: feature:7617815-7617964:-1:exon
so has part: feature:7615816-7615964:-1:exon
so has part: feature:7614152-7614248:-1:exon
so has part: feature:7612950-7613042:-1:exon
so has part: feature:7611904-7612074:-1:exon
so has part: feature:7609858-7610036:-1:exon
so has part: feature:7608379-7608420:-1:exon
so has part: feature:7607535-7607677:-1:exon
so has part: feature:7605772-7605910:-1:exon
so has part: feature:7602273-7602423:-1:exon
so has part: feature:7601027-7601149:-1:exon
so has part: feature:7595117-7595254:-1:exon
so has part: feature:7594393-7594524:-1:exon
so has part: feature:7593162-7593340:-1:exon
so has part: feature:7590594-7590690:-1:exon
so has part: feature:7589587-7589791:-1:exon
so has part: feature:7586771-7587011:-1:exon
so has part: feature:7584032-7584347:-1:exon

XP_032906023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7693808-7693816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7693309-7693577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7663994-7664216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7657313-7657399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7651947-7652011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7651497-7651655:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7648769-7648906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7647787-7647920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7644431-7644656:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7641753-7641853:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7637252-7637296:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7635848-7636029:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7634335-7634459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7632551-7632767:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7631195-7631284:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7629439-7629629:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7628765-7628953:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7627326-7627488:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7623954-7624106:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7620965-7621036:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7617815-7617964:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7615816-7615964:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7614152-7614248:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7612950-7613042:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7611904-7612074:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7609858-7610036:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7608379-7608420:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7607535-7607677:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7605772-7605910:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7602273-7602423:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7601027-7601149:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7595117-7595254:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7594393-7594524:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7593162-7593340:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7590594-7590690:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7589587-7589791:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7586771-7587011:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7584032-7584347:-1:exon

chd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: chd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 2 isoform X1
translation: MEQSLSECDNGIECLNNVAAASGFCKSSSGQLLNPADLLARREFDRAPRRSIATHPRVAQDKTEPPNSPGPNTMSSEGKDPEDDGSEHSNASSNLASEESNHSASGSESGSQSESEQGSESNNSSSDSSGSQSQSESESAGSKLQQTASENKDKPLSKKERIADVKKMWEEYPDVYGVRRSNRSRQEPARLNAGAEQESSENSENETPRRRGRRRATNWKNAKSEIEEDEDEELEEDGDEEEEEEDDDDEAGSADSEPVRSVRARRPVTRRPMAKTRGKRQAARRGKKRRRDSSDEDDDDDDTPKRQTRKCVIKNVSYKEDDDFETDSDDLIEVTGEPALEENDDSETIEKVIDSRRGKKGAIGARTTVYAVEADGNPGADFDPEKDESEVQYLIKWKGWSYIHNTWESEESLKQQKVKGLKKLENFIKKEEDINQWLSKASPEDVEYYNCQQEMTHELNKQYRIVERVIAMKTSKSSTSHSDISSLSCHKTPPSGQPDYLCKWMGLPYIDCSWEDGALISRNFQACIDAFHNRHSSKTIPSKDCKVLKQRPRFVALKTQPSYIGSEGLELRDYQLEGVNWLAHSWCKCNSVILADEMGLGKTIQTISFLSNLFNQLTLYGPFLLVVPLSTLSSWQREFEIWEPSMNVVVYIGDVMSRSTIREYDWTHPQTKRLKFNVLITTYEILLKDKNVLGNINWAFLGVDEAHRLKNDDSLLYRTLIDFRSNHRMLITGTPLQNSLKELWSLLHFIMPEKFHSWEDFEEEHGKGRENGFQSLHRVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSASQKQYYKWILTRNYRALTRGCRGSSSSFLNIMMELKKCCNHCYLVKPCEDNDMLTSLELLHNLIKSSGKLILLDKLMIRLRERGNRVLIFSQMVRMLDILAEYMTIKHYPFQRLDGSIKGELRKQALDHFNAEASEDFCFLLSTRAGGLGINLASADTVIIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSSARPSHSTPFNKEELSAILKFGAEELFKEAEGEESEPQEMDIDEILRLAETRENEQSVSPTDELLSQFKVANFTTMENQPEVDEKQIKEWDDIIPGEQRKKIEEEARQKELEDIYMLPRSRSSTKKARANGSDSDAGSRRRRQRSSGSESETEESDDGEKRPKRRGRPRTVRRDMVDGFTDAEIRRFIKSYKKFGAPLERLEGIARDAELVDKSIADLQRLGELIHNGCVMAVKEFEEQLKENPGLEGKGPGKKRGPTIKVSGVQVNVRSILIHEDEFEALHKTIPLDPEERKKFRLSCHAKAVHFDTDWGVEEDSNLLIGIYECGYSNWEQIKMDPELQLTNKILPVNPDHKPQAKHLQSRADYLIRLLKKDMIKKAGIKQEKESKPKKRKPRVKKENKAPKLKDECGNDISSPRLSDNASEEDGELKDGSLERTPMKKKLKKKDNKENKEKGDVKKDKDGQKGKKKAKAKKDKLKADAKDKLRKSVAKGPVHITAGNDPVPIGEEGEDELDQETFSICKERMRPVKKALKQLDKPEEGLSEKEQLQHTRSCLLKIGDRITDCLKAYSDSEHVKIWRRNLWIFVSKFTEFDARKLHKLYKLAQKRRSQEEEEQKKKGNNSESRRQFKPEPSGSSRDSMNSQSHMQHGPHGPHLLPPHHQHPHHRDPYPQHNKRPFNNADRDDRQRERMYNYNSQHWPSERHHPYDQHRYKDHHFDDRRPHGDPHRNSGNYRPNNLHRKRPYNQYDDERDHRGHRDYYDRRHQDMKRRRSDEFRPQDHHNLGHQQDFRRLPDHRGPGAYHSQGPSEHYRPFHMEKPMEHKTLSSEHRSPLSQKSPHDSRSPHDHRSPLDRSLDTPDYNWNARKT
SIO_010081: chd2
subclass of: SO_0000673
so part of: chd2
location: complement(join(7584032..7584347,7586771..7587011,7589587..7589791,7590594..7590690,7593162..7593340,7594393..7594524,7595117..7595254,7598006..7598137,7601027..7601149,7602273..7602423,7605772..7605910,7607535..7607677,7608379..7608420,7609858..7610036,7611904..7612074,7612950..7613042,7614152..7614248,7615816..7615964,7617815..7617964,7620965..7621036,7623954..7624106,7627326..7627488,7628765..7628953,7629439..7629629,7631195..7631284,7632551..7632767,7634335..7634459,7635848..7636029,7637252..7637296,7641753..7641853,7644431..7644656,7647787..7647920,7648769..7648906,7651497..7651655,7651947..7652011,7657313..7657399,7663994..7664216,7693309..7693577,7693808..7693816))
location: region:7584032-7693816:-1
so has part: feature:7693808-7693816:-1:exon
so has part: feature:7693309-7693577:-1:exon
so has part: feature:7663994-7664216:-1:exon
so has part: feature:7657313-7657399:-1:exon
so has part: feature:7651947-7652011:-1:exon
so has part: feature:7651497-7651655:-1:exon
so has part: feature:7648769-7648906:-1:exon
so has part: feature:7647787-7647920:-1:exon
so has part: feature:7644431-7644656:-1:exon
so has part: feature:7641753-7641853:-1:exon
so has part: feature:7637252-7637296:-1:exon
so has part: feature:7635848-7636029:-1:exon
so has part: feature:7634335-7634459:-1:exon
so has part: feature:7632551-7632767:-1:exon
so has part: feature:7631195-7631284:-1:exon
so has part: feature:7629439-7629629:-1:exon
so has part: feature:7628765-7628953:-1:exon
so has part: feature:7627326-7627488:-1:exon
so has part: feature:7623954-7624106:-1:exon
so has part: feature:7620965-7621036:-1:exon
so has part: feature:7617815-7617964:-1:exon
so has part: feature:7615816-7615964:-1:exon
so has part: feature:7614152-7614248:-1:exon
so has part: feature:7612950-7613042:-1:exon
so has part: feature:7611904-7612074:-1:exon
so has part: feature:7609858-7610036:-1:exon
so has part: feature:7608379-7608420:-1:exon
so has part: feature:7607535-7607677:-1:exon
so has part: feature:7605772-7605910:-1:exon
so has part: feature:7602273-7602423:-1:exon
so has part: feature:7601027-7601149:-1:exon
so has part: feature:7598006-7598137:-1:exon
so has part: feature:7595117-7595254:-1:exon
so has part: feature:7594393-7594524:-1:exon
so has part: feature:7593162-7593340:-1:exon
so has part: feature:7590594-7590690:-1:exon
so has part: feature:7589587-7589791:-1:exon
so has part: feature:7586771-7587011:-1:exon
so has part: feature:7584032-7584347:-1:exon

XP_032906017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7693808-7693816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7693309-7693577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7663994-7664216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7657313-7657399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7651947-7652011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7651497-7651655:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7648769-7648906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7647787-7647920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7644431-7644656:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7641753-7641853:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7637252-7637296:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7635848-7636029:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7634335-7634459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7632551-7632767:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7631195-7631284:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7629439-7629629:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7628765-7628953:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7627326-7627488:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7623954-7624106:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7620965-7621036:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7617815-7617964:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7615816-7615964:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7614152-7614248:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7612950-7613042:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7611904-7612074:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7609858-7610036:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7608379-7608420:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7607535-7607677:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7605772-7605910:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7602273-7602423:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7601027-7601149:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7598006-7598137:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7595117-7595254:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7594393-7594524:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7593162-7593340:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7590594-7590690:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7589587-7589791:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:7586771-7587011:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:7584032-7584347:-1:exon

chd2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: chd2
product: chromodomain helicase DNA binding protein 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416802.1
SIO_010081: chd2
so part of: chd2
location: complement(join(7586771..7587011,7589587..7589791,7593162..7593340,7594393..7594524,7595117..7595254,7598006..7598137,7601027..7601149,7602273..7602423,7605772..7605910,7607535..7607677,7608379..7608420,7609858..7610036,7611904..7612074,7612950..7613042,7614152..7614248,7615816..7615964,7617815..7617964,7620965..7621036,7623954..7624106,7627326..7627488,7628765..7628953,7629439..7629629,7631195..7631284,7632551..7632767,7634335..7634459,7635848..7636029,7637252..7637296,7641753..7641853,7644431..7644656,7647787..7647920,7648769..7648906,7651497..7651655,7651947..7652011,7657313..7657399,7663994..7664216,7693309..7693577,7693808..7694419))
location: region:7586771-7694419:-1
so has part: feature:7693808-7694419:-1:exon
so has part: feature:7693309-7693577:-1:exon
so has part: feature:7663994-7664216:-1:exon
so has part: feature:7657313-7657399:-1:exon
so has part: feature:7651947-7652011:-1:exon
so has part: feature:7651497-7651655:-1:exon
so has part: feature:7648769-7648906:-1:exon
so has part: feature:7647787-7647920:-1:exon
so has part: feature:7644431-7644656:-1:exon
so has part: feature:7641753-7641853:-1:exon
so has part: feature:7637252-7637296:-1:exon
so has part: feature:7635848-7636029:-1:exon
so has part: feature:7634335-7634459:-1:exon
so has part: feature:7632551-7632767:-1:exon
so has part: feature:7631195-7631284:-1:exon
so has part: feature:7629439-7629629:-1:exon
so has part: feature:7628765-7628953:-1:exon
so has part: feature:7627326-7627488:-1:exon
so has part: feature:7623954-7624106:-1:exon
so has part: feature:7620965-7621036:-1:exon
so has part: feature:7617815-7617964:-1:exon
so has part: feature:7615816-7615964:-1:exon
so has part: feature:7614152-7614248:-1:exon
so has part: feature:7612950-7613042:-1:exon
so has part: feature:7611904-7612074:-1:exon
so has part: feature:7609858-7610036:-1:exon
so has part: feature:7608379-7608420:-1:exon
so has part: feature:7607535-7607677:-1:exon
so has part: feature:7605772-7605910:-1:exon
so has part: feature:7602273-7602423:-1:exon
so has part: feature:7601027-7601149:-1:exon
so has part: feature:7598006-7598137:-1:exon
so has part: feature:7595117-7595254:-1:exon
so has part: feature:7594393-7594524:-1:exon
so has part: feature:7593162-7593340:-1:exon
so has part: feature:7589587-7589791:-1:exon
so has part: feature:7586771-7587011:-1:exon

position:7694419:-1
position: 7694419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7693808-7694419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7693309-7693577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7663994-7664216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7657313-7657399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7651947-7652011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7651497-7651655:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7648769-7648906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7647787-7647920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7644431-7644656:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7641753-7641853:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7637252-7637296:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7635848-7636029:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7634335-7634459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7632551-7632767:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7631195-7631284:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7629439-7629629:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7628765-7628953:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7627326-7627488:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7623954-7624106:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7620965-7621036:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7617815-7617964:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7615816-7615964:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7614152-7614248:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7612950-7613042:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7611904-7612074:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7609858-7610036:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7608379-7608420:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7607535-7607677:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7605772-7605910:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7602273-7602423:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7601027-7601149:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7598006-7598137:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7595117-7595254:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7594393-7594524:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7593162-7593340:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7589587-7589791:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7586771-7587011:-1:exon

chd2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: chd2
product: chromodomain helicase DNA binding protein 2, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004416806.1
SIO_010081: chd2
so part of: chd2
location: complement(join(7595145..7595254,7601030..7601149,7605772..7605910,7607535..7607677,7608379..7608420,7609858..7610036,7611904..7612074,7612950..7613042,7614152..7614248,7615816..7615964,7617815..7617964,7620965..7621036,7623954..7624106,7627326..7627488,7628765..7628953,7629439..7629629,7631195..7631284,7632551..7632767,7634335..7634459,7635848..7636029,7637252..7637296,7641753..7641853,7644431..7644656,7647787..7647920,7648769..7648906,7651497..7651655,7651947..7652011,7657313..7657399,7663994..7664216,7693309..7693577,7693808..7694421))
location: region:7595145-7694421:-1
so has part: feature:7693808-7694421:-1:exon
so has part: feature:7693309-7693577:-1:exon
so has part: feature:7663994-7664216:-1:exon
so has part: feature:7657313-7657399:-1:exon
so has part: feature:7651947-7652011:-1:exon
so has part: feature:7651497-7651655:-1:exon
so has part: feature:7648769-7648906:-1:exon
so has part: feature:7647787-7647920:-1:exon
so has part: feature:7644431-7644656:-1:exon
so has part: feature:7641753-7641853:-1:exon
so has part: feature:7637252-7637296:-1:exon
so has part: feature:7635848-7636029:-1:exon
so has part: feature:7634335-7634459:-1:exon
so has part: feature:7632551-7632767:-1:exon
so has part: feature:7631195-7631284:-1:exon
so has part: feature:7629439-7629629:-1:exon
so has part: feature:7628765-7628953:-1:exon
so has part: feature:7627326-7627488:-1:exon
so has part: feature:7623954-7624106:-1:exon
so has part: feature:7620965-7621036:-1:exon
so has part: feature:7617815-7617964:-1:exon
so has part: feature:7615816-7615964:-1:exon
so has part: feature:7614152-7614248:-1:exon
so has part: feature:7612950-7613042:-1:exon
so has part: feature:7611904-7612074:-1:exon
so has part: feature:7609858-7610036:-1:exon
so has part: feature:7608379-7608420:-1:exon
so has part: feature:7607535-7607677:-1:exon
so has part: feature:7605772-7605910:-1:exon
so has part: feature:7601030-7601149:-1:exon
so has part: feature:7595145-7595254:-1:exon

position:7595145:-1
position: 7595145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7693808-7694421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7693309-7693577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7663994-7664216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7657313-7657399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7651947-7652011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7651497-7651655:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7648769-7648906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7647787-7647920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7644431-7644656:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7641753-7641853:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7637252-7637296:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7635848-7636029:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7634335-7634459:-1:exon

urn:…
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SIO_000628: feature:7632551-7632767:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7631195-7631284:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7629439-7629629:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7628765-7628953:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7627326-7627488:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7623954-7624106:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7620965-7621036:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7617815-7617964:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7615816-7615964:-1:exon

urn:…
SIO_000300: 23
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SIO_000300: 25
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SIO_000300: 26
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SIO_000300: 27
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urn:…
SIO_000300: 28
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urn:…
SIO_000300: 29
SIO_000628: feature:7605772-7605910:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7601030-7601149:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7595145-7595254:-1:exon

chd2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: chd2
product: chromodomain helicase DNA binding protein 2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004416805.1
SIO_010081: chd2
so part of: chd2
location: complement(join(7595226..7595254,7601027..7601149,7605772..7605910,7607535..7607677,7608379..7608420,7609858..7610036,7611904..7612074,7612950..7613042,7614152..7614248,7615816..7615964,7617815..7617964,7620965..7621036,7623954..7624106,7627326..7627488,7628765..7628953,7629439..7629629,7631195..7631284,7632551..7632767,7634335..7634459,7635848..7636029,7637252..7637296,7641753..7641853,7644431..7644656,7647787..7647920,7648769..7648906,7651497..7651655,7651947..7652011,7657313..7657399,7663994..7664216,7693309..7693577,7693808..7694421))
location: region:7595226-7694421:-1
so has part: feature:7693808-7694421:-1:exon
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so has part: feature:7663994-7664216:-1:exon
so has part: feature:7657313-7657399:-1:exon
so has part: feature:7651947-7652011:-1:exon
so has part: feature:7651497-7651655:-1:exon
so has part: feature:7648769-7648906:-1:exon
so has part: feature:7647787-7647920:-1:exon
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position:7595226:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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SIO_000300: 24
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SIO_000300: 25
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SIO_000300: 26
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SIO_000300: 28
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urn:…
SIO_000300: 29
SIO_000628: feature:7605772-7605910:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7601027-7601149:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7595226-7595254:-1:exon

chd2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: chd2
product: chromodomain helicase DNA binding protein 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004416803.1
SIO_010081: chd2
so part of: chd2
location: complement(join(7598007..7598137,7601027..7601149,7605772..7605910,7607535..7607677,7608379..7608420,7609858..7610036,7611904..7612074,7612950..7613042,7614152..7614248,7615816..7615964,7617815..7617964,7620965..7621036,7623954..7624106,7627326..7627488,7628765..7628953,7629439..7629629,7631195..7631284,7632551..7632767,7634335..7634459,7635848..7636029,7637252..7637296,7641753..7641853,7644431..7644656,7647787..7647920,7648769..7648906,7651497..7651655,7651947..7652011,7657313..7657399,7663994..7664216,7693309..7693577,7693808..7694421))
location: region:7598007-7694421:-1
so has part: feature:7693808-7694421:-1:exon
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so has part: feature:7663994-7664216:-1:exon
so has part: feature:7657313-7657399:-1:exon
so has part: feature:7651947-7652011:-1:exon
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so has part: feature:7648769-7648906:-1:exon
so has part: feature:7647787-7647920:-1:exon
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so has part: feature:7601027-7601149:-1:exon
so has part: feature:7598007-7598137:-1:exon

position:7598007:-1
position: 7598007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7693808-7694421:-1:exon

urn:…
SIO_000300: 2
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SIO_000300: 24
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SIO_000300: 25
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urn:…
SIO_000300: 30
SIO_000628: feature:7601027-7601149:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7598007-7598137:-1:exon

chd2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: chd2
product: chromodomain helicase DNA binding protein 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004416804.1
SIO_010081: chd2
so part of: chd2
location: complement(join(7598027..7598137,7601030..7601149,7605772..7605910,7607535..7607677,7608379..7608420,7609858..7610036,7611904..7612074,7612950..7613042,7614152..7614248,7615816..7615964,7617815..7617964,7620965..7621036,7623954..7624106,7627326..7627488,7628765..7628953,7629439..7629629,7631195..7631284,7632551..7632767,7634335..7634459,7635848..7636029,7637252..7637296,7641753..7641853,7644431..7644656,7647787..7647920,7648769..7648906,7651497..7651655,7651947..7652011,7657313..7657399,7663994..7664216,7693309..7693577,7693808..7694421))
location: region:7598027-7694421:-1
so has part: feature:7693808-7694421:-1:exon
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so has part: feature:7651947-7652011:-1:exon
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so has part: feature:7627326-7627488:-1:exon
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so has part: feature:7605772-7605910:-1:exon
so has part: feature:7601030-7601149:-1:exon
so has part: feature:7598027-7598137:-1:exon

position:7598027:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7693808-7694421:-1:exon

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SIO_000300: 2
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urn:…
SIO_000300: 24
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SIO_000300: 25
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urn:…
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urn:…
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urn:…
SIO_000300: 30
SIO_000628: feature:7601030-7601149:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7598027-7598137:-1:exon

LOC116991496
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116991496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7684655..7685102)
location: region:7684655-7685102:-1
so has part: feature:7684655-7685102:-1:exon
subclass of: SO_0000011

116991496
type: Gene
SIO_000068: ncbigene

position:7684655:-1
position: 7684655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7685102:-1
position: 7685102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7684655-7685102:-1:exon

LOC116991496
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116991496
product: uncharacterized LOC116991496
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004416807.1
SIO_010081: LOC116991496
subclass of: SO_0000673
so part of: LOC116991496
location: complement(join(7684655..7684935,7685052..7685102))
location: region:7684655-7685102:-1
so has part: feature:7685052-7685102:-1:exon
so has part: feature:7684655-7684935:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7685052-7685102:-1:exon

position:7685052:-1
position: 7685052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7684655-7684935:-1:exon

position:7684935:-1
position: 7684935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ctc1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ctc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7696656..7767067)
location: region:7696656-7767067:-1
so has part: feature:7696656-7767067:-1:exon
subclass of: SO_0000010

116991590
type: Gene
SIO_000068: ncbigene

position:7696656:-1
position: 7696656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7767067:-1
position: 7767067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7696656-7767067:-1:exon

ctc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ctc1
product: CST telomere replication complex component 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033050311.1
SIO_010081: ctc1
subclass of: SO_0000673
so part of: ctc1
location: complement(join(7696656..7699165,7713886..7714015,7716490..7716655,7719320..7719384,7720330..7720495,7721347..7721424,7723044..7723209,7723865..7723974,7724532..7724626,7725458..7725598,7726490..7726579,7732691..7733360,7739185..7739299,7741553..7741685,7746140..7746340,7748495..7748644,7752872..7753000,7755685..7756002,7759575..7759716,7760813..7761036,7762514..7762778,7765274..7765458,7766944..7767067))
location: region:7696656-7767067:-1
so has part: feature:7766944-7767067:-1:exon
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so has part: feature:7752872-7753000:-1:exon
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so has part: feature:7732691-7733360:-1:exon
so has part: feature:7726490-7726579:-1:exon
so has part: feature:7725458-7725598:-1:exon
so has part: feature:7724532-7724626:-1:exon
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so has part: feature:7720330-7720495:-1:exon
so has part: feature:7719320-7719384:-1:exon
so has part: feature:7716490-7716655:-1:exon
so has part: feature:7713886-7714015:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:7766944-7767067:-1:exon

position:7766944:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:7765274-7765458:-1:exon

position:7765274:-1
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position:7765458:-1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:7762514-7762778:-1:exon

position:7762514:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7762778:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:7760813-7761036:-1:exon

position:7760813:-1
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reference: sequence
type: ReverseStrandPosition
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position:7761036:-1
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urn:…
SIO_000300: 5
SIO_000628: feature:7759575-7759716:-1:exon

position:7759575:-1
position: 7759575
reference: sequence
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position:7759716:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:7755685-7756002:-1:exon

position:7755685:-1
position: 7755685
reference: sequence
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position:7756002:-1
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urn:…
SIO_000300: 7
SIO_000628: feature:7752872-7753000:-1:exon

position:7752872:-1
position: 7752872
reference: sequence
type: ReverseStrandPosition
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position:7753000:-1
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urn:…
SIO_000300: 8
SIO_000628: feature:7748495-7748644:-1:exon

position:7748495:-1
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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:7746140-7746340:-1:exon

position:7746140:-1
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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:7741553-7741685:-1:exon

position:7741553:-1
position: 7741553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7741685:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:7739185-7739299:-1:exon

position:7739185:-1
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reference: sequence
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position:7739299:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:7732691-7733360:-1:exon

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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:7726490-7726579:-1:exon

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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:7725458-7725598:-1:exon

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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:7724532-7724626:-1:exon

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urn:…
SIO_000300: 16
SIO_000628: feature:7723865-7723974:-1:exon

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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:7723044-7723209:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:7721347-7721424:-1:exon

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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:7720330-7720495:-1:exon

position:7720330:-1
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reference: sequence
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position:7720495:-1
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:7719320-7719384:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:7716490-7716655:-1:exon

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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:7713886-7714015:-1:exon

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reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:7696656-7699165:-1:exon

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reference: sequence
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ctc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ctc1
product: CST telomere replication complex component 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033050309.1
SIO_010081: ctc1
subclass of: SO_0000673
so part of: ctc1
location: complement(join(7696656..7699165,7713886..7714015,7716490..7716655,7719320..7719384,7720330..7720495,7721347..7721424,7723044..7723209,7723865..7723974,7724532..7724626,7725458..7725598,7726490..7726579,7732691..7733360,7739185..7739299,7741553..7741685,7746140..7746340,7748495..7748669,7750320..7750546,7752872..7753000,7755685..7756002,7759575..7759716,7760813..7761036,7762514..7762778,7765274..7765458,7766944..7767067))
location: region:7696656-7767067:-1
so has part: feature:7766944-7767067:-1:exon
so has part: feature:7765274-7765458:-1:exon
so has part: feature:7762514-7762778:-1:exon
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so has part: feature:7716490-7716655:-1:exon
so has part: feature:7713886-7714015:-1:exon
so has part: feature:7696656-7699165:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7766944-7767067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7765274-7765458:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7762514-7762778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7760813-7761036:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7759575-7759716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7755685-7756002:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7752872-7753000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7750320-7750546:-1:exon

position:7750320:-1
position: 7750320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7750546:-1
position: 7750546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7748495-7748669:-1:exon

position:7748669:-1
position: 7748669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7746140-7746340:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7741553-7741685:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7739185-7739299:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7732691-7733360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7726490-7726579:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7725458-7725598:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7724532-7724626:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7723865-7723974:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7723044-7723209:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7721347-7721424:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7720330-7720495:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7719320-7719384:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7716490-7716655:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7713886-7714015:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7696656-7699165:-1:exon

ctc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ctc1
product: CST telomere replication complex component 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033050312.1
SIO_010081: ctc1
subclass of: SO_0000673
so part of: ctc1
location: complement(join(7696656..7699165,7713886..7714015,7716490..7716655,7719320..7719384,7720330..7720495,7721347..7721424,7723044..7723209,7723865..7723974,7724532..7724626,7725458..7725598,7726490..7726579,7732691..7733360,7739185..7739299,7741553..7741685,7746140..7746340,7748495..7748669,7750320..7750546,7752872..7753000,7755685..7756002,7759575..7759716,7760813..7760986,7762514..7762667))
location: region:7696656-7762667:-1
so has part: feature:7762514-7762667:-1:exon
so has part: feature:7760813-7760986:-1:exon
so has part: feature:7759575-7759716:-1:exon
so has part: feature:7755685-7756002:-1:exon
so has part: feature:7752872-7753000:-1:exon
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so has part: feature:7746140-7746340:-1:exon
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so has part: feature:7732691-7733360:-1:exon
so has part: feature:7726490-7726579:-1:exon
so has part: feature:7725458-7725598:-1:exon
so has part: feature:7724532-7724626:-1:exon
so has part: feature:7723865-7723974:-1:exon
so has part: feature:7723044-7723209:-1:exon
so has part: feature:7721347-7721424:-1:exon
so has part: feature:7720330-7720495:-1:exon
so has part: feature:7719320-7719384:-1:exon
so has part: feature:7716490-7716655:-1:exon
so has part: feature:7713886-7714015:-1:exon
so has part: feature:7696656-7699165:-1:exon

position:7762667:-1
position: 7762667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7762514-7762667:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7760813-7760986:-1:exon

position:7760986:-1
position: 7760986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7759575-7759716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7755685-7756002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7752872-7753000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7750320-7750546:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7748495-7748669:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7746140-7746340:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7741553-7741685:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7739185-7739299:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7732691-7733360:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7726490-7726579:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7725458-7725598:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7724532-7724626:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7723865-7723974:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7723044-7723209:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7721347-7721424:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7720330-7720495:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7719320-7719384:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7716490-7716655:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7713886-7714015:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7696656-7699165:-1:exon

ctc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ctc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CST complex subunit CTC1 isoform X2
translation: MEEFVAEFEELGGATVKWLQNLYRFTEENLLPVVHSEITCKELSACLVKCLHRICLNCSDPCCQQGKNELALLNYRFVSLCELQSQQKSPCCSHLAWSASQFEEWSQGKESFPDGHKPLSRTNLLLCGYLTDKICNIPGTSEITGEQSDGNLYLQGKNGFIPCEILKLDLQWLGHLVLFSSWSYIPMKDWRPYGIETGYLEIMEAPCLVLPKQTVDKLMGPSSLNVLLPDTAIHLLNKGVHRQRVKLNIAGELCRLSSVLSIRGKTFFFFFLSSFTSDTCLPVVIKVPDKLMWHQCLEVSKQYIITKVFISSIQGTNYKVFVVSSSSDFYNYNEGIVKEQTLAEFMQATSTSLVPPPPNEGSFQRRLSMSQSPQSTMEEVLESKESKIISYHGVISKVLNCRAGLYELDGKFGLCVAYQQLVNYGRGLRPGAQVEQHMLKCGTNAGIIGTLFNCILDCTKWNSPQPTRDIYQEILAEMHKCPVMEISRLNIPCQMPSLAELLSMAEEQAWNSLDLSSLLPDNEIRHLVASQLNSKLAWSFDVLGPEDFQPQMILNGVFQANSVTGHLQLVDASGSLDCVLQNSEESQTAFSDTSYIGCLVQLQKYRVVLERFMHCDFPSSKYLDDSTFVKEKHTRVYVECCAGDLQVLGKSASPERASPTPPATTGVNARTCSCNGACKNHEVNSITSNQHQHGPSLPKMPLLEEVVLQEGHVGESRRTVCSHPLWSGRAAAASPSVKEQQQQQRGAATCTVHPAACKGKRKHKRRSVGCVTQLMVVTHKDALMLRNCQYGRSEGSEHTNGSVEALGKRTKAGLGLSFHVTAFTLESPRRWKDEGSIEGLLELETDPTLCSEYNNRTQVQLDFMGEAVRWYHLINHEGVYRVIGPEQVGASVFEQHSSSIPLKTLQSMNCPRCLVVQPDWKFQYISTFSDLRQSPLSKKQTNTFAYFEKLASEIPHPRTVRDVLSGSFSASLVSFTGIILERMCFESKRRPNFPSFITDINTKGVLVPGDWGLKFTIGHVQDRTIALDVYVDLSQLTYTIGILPGTIVAFYNLERITSRHNNVYCKFVPWSSVSVLAFSSSEDKSSSRSTLITDRPHVYLGDLISGKESCRQGTVCCHVVNLQWMKLQWVCSRCSSIYKQGRCTRSSEPCPSAVGVFHANTKIIVEDGTAEAWVHCKDKQVADLLQLSSTEWEGLQQHVGQRGNVFFQYQGRSGHELHEENTGDLLMQYLGTVCASTMVCRPIQLAFKVDSRVKPKLGHTETFQMRILRSGDHQYCTKMAPGLSLTCLHIKEVDYRMLCHLGNDRLI
SIO_010081: ctc1
subclass of: SO_0000673
so part of: ctc1
location: complement(join(7699023..7699165,7713886..7714015,7716490..7716655,7719320..7719384,7720330..7720495,7721347..7721424,7723044..7723209,7723865..7723974,7724532..7724626,7725458..7725598,7726490..7726579,7732691..7733360,7739185..7739299,7741553..7741685,7746140..7746340,7748495..7748644,7752872..7753000,7755685..7756002,7759575..7759716,7760813..7761036,7762514..7762778,7765274..7765458,7766944..7766985))
location: region:7699023-7766985:-1
so has part: feature:7766944-7766985:-1:exon
so has part: feature:7765274-7765458:-1:exon
so has part: feature:7762514-7762778:-1:exon
so has part: feature:7760813-7761036:-1:exon
so has part: feature:7759575-7759716:-1:exon
so has part: feature:7755685-7756002:-1:exon
so has part: feature:7752872-7753000:-1:exon
so has part: feature:7748495-7748644:-1:exon
so has part: feature:7746140-7746340:-1:exon
so has part: feature:7741553-7741685:-1:exon
so has part: feature:7739185-7739299:-1:exon
so has part: feature:7732691-7733360:-1:exon
so has part: feature:7726490-7726579:-1:exon
so has part: feature:7725458-7725598:-1:exon
so has part: feature:7724532-7724626:-1:exon
so has part: feature:7723865-7723974:-1:exon
so has part: feature:7723044-7723209:-1:exon
so has part: feature:7721347-7721424:-1:exon
so has part: feature:7720330-7720495:-1:exon
so has part: feature:7719320-7719384:-1:exon
so has part: feature:7716490-7716655:-1:exon
so has part: feature:7713886-7714015:-1:exon
so has part: feature:7699023-7699165:-1:exon

XP_032906202.1
type: Protein
SIO_000068: ncbiprotein

position:7699023:-1
position: 7699023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7766985:-1
position: 7766985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7766944-7766985:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7765274-7765458:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7762514-7762778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7760813-7761036:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7759575-7759716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7755685-7756002:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7752872-7753000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7748495-7748644:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7746140-7746340:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7741553-7741685:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7739185-7739299:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7732691-7733360:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7726490-7726579:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7725458-7725598:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7724532-7724626:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7723865-7723974:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7723044-7723209:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7721347-7721424:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7720330-7720495:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7719320-7719384:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7716490-7716655:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7713886-7714015:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7699023-7699165:-1:exon

ctc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ctc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CST complex subunit CTC1 isoform X1
translation: MEEFVAEFEELGGATVKWLQNLYRFTEENLLPVVHSEITCKELSACLVKCLHRICLNCSDPCCQQGKNELALLNYRFVSLCELQSQQKSPCCSHLAWSASQFEEWSQGKESFPDGHKPLSRTNLLLCGYLTDKICNIPGTSEITGEQSDGNLYLQGKNGFIPCEILKLDLQWLGHLVLFSSWSYIPMKDWRPYGIETGYLEIMEAPCLVLPKQTVDKLMGPSSLNVLLPDTAIHLLNKGVHRQRVKLNIAGELCRLSSVLSIRGKTFFFFFLSSFTSDTCLPVVIKVPDKLMWHQCLEVSKQYIITKVFISSIQGTNYKVFVVSSSSDFYNYNEGIVKEQTLAEFMQATSTSLVPPPPNEGSFQRRLSMSQSPQSTMEEVLESKESKIISYHGVISKVLNCRAGLYELDGKFGLCVAYQQLVNYGRGLRPGAQVEVFDAHVHVKVSDHLPHIMLCCCLRSILQITRFSRLSTEYHPFSPSCNIYIHLLFKYNLDLPSYLWLVHIIDTFVQRFCPCYTSQQHMLKCGTNAGIIGTLFNCILDCTKWNSPQPTRDIYQEILAEMHKCPVMEISRLNIPCQMPSLAELLSMAEEQAWNSLDLSSLLPDNEIRHLVASQLNSKLAWSFDVLGPEDFQPQMILNGVFQANSVTGHLQLVDASGSLDCVLQNSEESQTAFSDTSYIGCLVQLQKYRVVLERFMHCDFPSSKYLDDSTFVKEKHTRVYVECCAGDLQVLGKSASPERASPTPPATTGVNARTCSCNGACKNHEVNSITSNQHQHGPSLPKMPLLEEVVLQEGHVGESRRTVCSHPLWSGRAAAASPSVKEQQQQQRGAATCTVHPAACKGKRKHKRRSVGCVTQLMVVTHKDALMLRNCQYGRSEGSEHTNGSVEALGKRTKAGLGLSFHVTAFTLESPRRWKDEGSIEGLLELETDPTLCSEYNNRTQVQLDFMGEAVRWYHLINHEGVYRVIGPEQVGASVFEQHSSSIPLKTLQSMNCPRCLVVQPDWKFQYISTFSDLRQSPLSKKQTNTFAYFEKLASEIPHPRTVRDVLSGSFSASLVSFTGIILERMCFESKRRPNFPSFITDINTKGVLVPGDWGLKFTIGHVQDRTIALDVYVDLSQLTYTIGILPGTIVAFYNLERITSRHNNVYCKFVPWSSVSVLAFSSSEDKSSSRSTLITDRPHVYLGDLISGKESCRQGTVCCHVVNLQWMKLQWVCSRCSSIYKQGRCTRSSEPCPSAVGVFHANTKIIVEDGTAEAWVHCKDKQVADLLQLSSTEWEGLQQHVGQRGNVFFQYQGRSGHELHEENTGDLLMQYLGTVCASTMVCRPIQLAFKVDSRVKPKLGHTETFQMRILRSGDHQYCTKMAPGLSLTCLHIKEVDYRMLCHLGNDRLI
SIO_010081: ctc1
subclass of: SO_0000673
so part of: ctc1
location: complement(join(7699023..7699165,7713886..7714015,7716490..7716655,7719320..7719384,7720330..7720495,7721347..7721424,7723044..7723209,7723865..7723974,7724532..7724626,7725458..7725598,7726490..7726579,7732691..7733360,7739185..7739299,7741553..7741685,7746140..7746340,7748495..7748669,7750320..7750546,7752872..7753000,7755685..7756002,7759575..7759716,7760813..7761036,7762514..7762778,7765274..7765458,7766944..7766985))
location: region:7699023-7766985:-1
so has part: feature:7766944-7766985:-1:exon
so has part: feature:7765274-7765458:-1:exon
so has part: feature:7762514-7762778:-1:exon
so has part: feature:7760813-7761036:-1:exon
so has part: feature:7759575-7759716:-1:exon
so has part: feature:7755685-7756002:-1:exon
so has part: feature:7752872-7753000:-1:exon
so has part: feature:7750320-7750546:-1:exon
so has part: feature:7748495-7748669:-1:exon
so has part: feature:7746140-7746340:-1:exon
so has part: feature:7741553-7741685:-1:exon
so has part: feature:7739185-7739299:-1:exon
so has part: feature:7732691-7733360:-1:exon
so has part: feature:7726490-7726579:-1:exon
so has part: feature:7725458-7725598:-1:exon
so has part: feature:7724532-7724626:-1:exon
so has part: feature:7723865-7723974:-1:exon
so has part: feature:7723044-7723209:-1:exon
so has part: feature:7721347-7721424:-1:exon
so has part: feature:7720330-7720495:-1:exon
so has part: feature:7719320-7719384:-1:exon
so has part: feature:7716490-7716655:-1:exon
so has part: feature:7713886-7714015:-1:exon
so has part: feature:7699023-7699165:-1:exon

XP_032906200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7766944-7766985:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7765274-7765458:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7762514-7762778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7760813-7761036:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7759575-7759716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7755685-7756002:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7752872-7753000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7750320-7750546:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7748495-7748669:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7746140-7746340:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7741553-7741685:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7739185-7739299:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7732691-7733360:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7726490-7726579:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7725458-7725598:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7724532-7724626:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7723865-7723974:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7723044-7723209:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7721347-7721424:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7720330-7720495:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7719320-7719384:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7716490-7716655:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7713886-7714015:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7699023-7699165:-1:exon

ctc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ctc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CST complex subunit CTC1 isoform X3
translation: MEICICRARMDSFLVSWSYIPMKDWRPYGIETGYLEIMEAPCLVLPKQTVDKLMGPSSLNVLLPDTAIHLLNKGVHRQRVKLNIAGELCRLSSVLSIRGKTFFFFFLSSFTSDTCLPVVIKVPDKLMWHQCLEVSKQYIITKVFISSIQGTNYKVFVVSSSSDFYNYNEGIVKEQTLAEFMQATSTSLVPPPPNEGSFQRRLSMSQSPQSTMEEVLESKESKIISYHGVISKVLNCRAGLYELDGKFGLCVAYQQLVNYGRGLRPGAQVEVFDAHVHVKVSDHLPHIMLCCCLRSILQITRFSRLSTEYHPFSPSCNIYIHLLFKYNLDLPSYLWLVHIIDTFVQRFCPCYTSQQHMLKCGTNAGIIGTLFNCILDCTKWNSPQPTRDIYQEILAEMHKCPVMEISRLNIPCQMPSLAELLSMAEEQAWNSLDLSSLLPDNEIRHLVASQLNSKLAWSFDVLGPEDFQPQMILNGVFQANSVTGHLQLVDASGSLDCVLQNSEESQTAFSDTSYIGCLVQLQKYRVVLERFMHCDFPSSKYLDDSTFVKEKHTRVYVECCAGDLQVLGKSASPERASPTPPATTGVNARTCSCNGACKNHEVNSITSNQHQHGPSLPKMPLLEEVVLQEGHVGESRRTVCSHPLWSGRAAAASPSVKEQQQQQRGAATCTVHPAACKGKRKHKRRSVGCVTQLMVVTHKDALMLRNCQYGRSEGSEHTNGSVEALGKRTKAGLGLSFHVTAFTLESPRRWKDEGSIEGLLELETDPTLCSEYNNRTQVQLDFMGEAVRWYHLINHEGVYRVIGPEQVGASVFEQHSSSIPLKTLQSMNCPRCLVVQPDWKFQYISTFSDLRQSPLSKKQTNTFAYFEKLASEIPHPRTVRDVLSGSFSASLVSFTGIILERMCFESKRRPNFPSFITDINTKGVLVPGDWGLKFTIGHVQDRTIALDVYVDLSQLTYTIGILPGTIVAFYNLERITSRHNNVYCKFVPWSSVSVLAFSSSEDKSSSRSTLITDRPHVYLGDLISGKESCRQGTVCCHVVNLQWMKLQWVCSRCSSIYKQGRCTRSSEPCPSAVGVFHANTKIIVEDGTAEAWVHCKDKQVADLLQLSSTEWEGLQQHVGQRGNVFFQYQGRSGHELHEENTGDLLMQYLGTVCASTMVCRPIQLAFKVDSRVKPKLGHTETFQMRILRSGDHQYCTKMAPGLSLTCLHIKEVDYRMLCHLGNDRLI
SIO_010081: ctc1
subclass of: SO_0000673
so part of: ctc1
location: complement(join(7699023..7699165,7713886..7714015,7716490..7716655,7719320..7719384,7720330..7720495,7721347..7721424,7723044..7723209,7723865..7723974,7724532..7724626,7725458..7725598,7726490..7726579,7732691..7733360,7739185..7739299,7741553..7741685,7746140..7746340,7748495..7748669,7750320..7750546,7752872..7753000,7755685..7756002,7759575..7759716,7760813..7760986,7762514..7762560))
location: region:7699023-7762560:-1
so has part: feature:7762514-7762560:-1:exon
so has part: feature:7760813-7760986:-1:exon
so has part: feature:7759575-7759716:-1:exon
so has part: feature:7755685-7756002:-1:exon
so has part: feature:7752872-7753000:-1:exon
so has part: feature:7750320-7750546:-1:exon
so has part: feature:7748495-7748669:-1:exon
so has part: feature:7746140-7746340:-1:exon
so has part: feature:7741553-7741685:-1:exon
so has part: feature:7739185-7739299:-1:exon
so has part: feature:7732691-7733360:-1:exon
so has part: feature:7726490-7726579:-1:exon
so has part: feature:7725458-7725598:-1:exon
so has part: feature:7724532-7724626:-1:exon
so has part: feature:7723865-7723974:-1:exon
so has part: feature:7723044-7723209:-1:exon
so has part: feature:7721347-7721424:-1:exon
so has part: feature:7720330-7720495:-1:exon
so has part: feature:7719320-7719384:-1:exon
so has part: feature:7716490-7716655:-1:exon
so has part: feature:7713886-7714015:-1:exon
so has part: feature:7699023-7699165:-1:exon

XP_032906203.1
type: Protein
SIO_000068: ncbiprotein

position:7762560:-1
position: 7762560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7762514-7762560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7760813-7760986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7759575-7759716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7755685-7756002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7752872-7753000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7750320-7750546:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7748495-7748669:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7746140-7746340:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7741553-7741685:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7739185-7739299:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7732691-7733360:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7726490-7726579:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7725458-7725598:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7724532-7724626:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7723865-7723974:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7723044-7723209:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7721347-7721424:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7720330-7720495:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7719320-7719384:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7716490-7716655:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7713886-7714015:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7699023-7699165:-1:exon

fam174b
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: fam174b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7769586..7793591
location: region:7769586-7793591:1
so has part: feature:7769586-7793591:1:exon
subclass of: SO_0000010

116991688
type: Gene
SIO_000068: ncbigene

position:7769586:1
position: 7769586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7793591:1
position: 7793591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7769586-7793591:1:exon

fam174b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fam174b
product: family with sequence similarity 174 member B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033050518.1
SIO_010081: fam174b
subclass of: SO_0000673
so part of: fam174b
location: join(7769586..7769931,7777735..7777869,7786861..7793591)
location: region:7769586-7793591:1
so has part: feature:7769586-7769931:1:exon
so has part: feature:7777735-7777869:1:exon
so has part: feature:7786861-7793591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7769586-7769931:1:exon

position:7769931:1
position: 7769931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7777735-7777869:1:exon

position:7777735:1
position: 7777735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7777869:1
position: 7777869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7786861-7793591:1:exon

position:7786861:1
position: 7786861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fam174b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fam174b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane protein FAM174B
translation: MAGASAWVAICRCLYPLSALLLLAVHPLLVPAVMPVTDLPPPHNRSAPPGAHGNATTTAQASSVATVLAMLRHYPALEGLVLASCAGALLLVVCLMVKVFRSRRKYRKTRKYDIITTPAEKVEMTPLNEEDDDDEDATVFDVKYSR
SIO_010081: fam174b
subclass of: SO_0000673
so part of: fam174b
location: join(7769630..7769931,7777735..7777869,7786861..7786864)
location: region:7769630-7786864:1
so has part: feature:7769630-7769931:1:exon
so has part: feature:7777735-7777869:1:exon
so has part: feature:7786861-7786864:1:exon

XP_032906409.1
type: Protein
SIO_000068: ncbiprotein

position:7769630:1
position: 7769630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7786864:1
position: 7786864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7769630-7769931:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7777735-7777869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7786861-7786864:1:exon

st8sia2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: st8sia2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7806627..7843730)
location: region:7806627-7843730:-1
so has part: feature:7806627-7843730:-1:exon
subclass of: SO_0000010

116991506
type: Gene
SIO_000068: ncbigene

position:7806627:-1
position: 7806627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7843730:-1
position: 7843730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7806627-7843730:-1:exon

st8sia2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: st8sia2
product: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033050153.1
SIO_010081: st8sia2
subclass of: SO_0000673
so part of: st8sia2
location: complement(join(7806627..7808034,7810850..7811143,7821832..7822089,7827139..7827255,7834959..7835021,7843126..7843730))
location: region:7806627-7843730:-1
so has part: feature:7843126-7843730:-1:exon
so has part: feature:7834959-7835021:-1:exon
so has part: feature:7827139-7827255:-1:exon
so has part: feature:7821832-7822089:-1:exon
so has part: feature:7810850-7811143:-1:exon
so has part: feature:7806627-7808034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7843126-7843730:-1:exon

position:7843126:-1
position: 7843126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7834959-7835021:-1:exon

position:7834959:-1
position: 7834959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7835021:-1
position: 7835021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7827139-7827255:-1:exon

position:7827139:-1
position: 7827139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7827255:-1
position: 7827255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7821832-7822089:-1:exon

position:7821832:-1
position: 7821832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7822089:-1
position: 7822089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7810850-7811143:-1:exon