Amblyraja radiata isolate CabotCenter1 chromosome 29, sAmbRad1.1.pri, whole genome shotgun sequence.
type: Entry
definition: Amblyraja radiata isolate CabotCenter1 chromosome 29, sAmbRad1.1.pri, whole genome shotgun sequence.
sequence version: NC_045984.1
sequence date: 2021-04-05
sequence: sequence
division: CON
label: NC_045984.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA610638
dblink: SAMN09948523
keyword: WGS
keyword: RefSeq
source: Amblyraja radiata (thorny skate)
organism: Amblyraja radiata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Amblyraja.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021394.1.\nAssembly name: sAmbRad1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/21. The original whole-genome shotgun project has the\naccession JAAGWR000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 13-JAN-2020\nAssembly Method :: Canu v. 1.7; purge_haplotigs v. bitbucket\n 7.10.2018; scaff10x v. 4.1.0; Bionano\n Solve DLS v. 3.3; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes Illumina polishing v.\n 1.3.1; purge_dups v.\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n gEVAL manual curation v. 2020-01-13; VGP\n assembly pipeline v. 1.5\nAssembly Name :: sAmbRad1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 128.24x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Amblyraja radiata Updated Annotation\n Release 100.20210331\nAnnotation Version :: 100.20210331\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 34661412
topology: linear
so has quality: SO_0000987
location: 1..34661412
location: region:1-34661412:1
RO_0002162: 386614

NC_045984
type: RefSeq
SIO_000068: refseq

PRJNA610638
type: BioProject
SIO_000068: bioproject

SAMN09948523
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34661412:1
position: 34661412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-34661412:1:source
so part of: sequence
organism: Amblyraja radiata
mol type: genomic DNA
isolate: CabotCenter1
chromosome: 29
sex: male
tissue type: testis, liver
country: USA: Gulf of Main
lat lon: 43.1336 N 68.3266 W
collection date: 2017-09-18
collected by: Jeff Kneebone

386614
type: Taxonomy
SIO_000068: taxonomy

LOC116989735
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 92398..97008
location: region:92398-97008:1
so has part: feature:92398-97008:1:exon
subclass of: SO_0000010

116989735
type: Gene
SIO_000068: ncbigene

position:92398:1
position: 92398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97008:1
position: 97008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92398-97008:1:exon

LOC116989735
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989735
product: uncharacterized LOC116989735, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033047331.1
SIO_010081: LOC116989735
subclass of: SO_0000673
so part of: LOC116989735
location: join(92398..92797,96367..97008)
location: region:92398-97008:1
so has part: feature:92398-92797:1:exon
so has part: feature:96367-97008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92398-92797:1:exon

position:92797:1
position: 92797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96367-97008:1:exon

position:96367:1
position: 96367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989735
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989735
product: uncharacterized LOC116989735, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047330.1
SIO_010081: LOC116989735
subclass of: SO_0000673
so part of: LOC116989735
location: join(92398..92936,96368..97006)
location: region:92398-97006:1
so has part: feature:92398-92936:1:exon
so has part: feature:96368-97006:1:exon

position:97006:1
position: 97006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92398-92936:1:exon

position:92936:1
position: 92936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96368-97006:1:exon

position:96368:1
position: 96368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116989735 isoform X1
translation: MKRRSKNQLNVSEVNKRDSEREGLKRPSKTQLNVSEMNERDSGRERLKKHSRKELNVSEINERDFAREGLKCRSRKELNVSELNERDSGREGLKTCCKVNIAPLKTLPNALINLYTGDTPQDHEFRKNIRQYNCLFQLTSFGAKEVVAHGWNPSVIIQGQIYHFIGSLMPDQDQQSKFLLIYFMDPHDSIDLRMSILQDAGIQRDTVEMLENMIRLNNPYIDSLVMTTERIRDLPEASIVIDPNYRPPLEHERRFNTQTANVVAVLIPKSNQPAATSRHIVLSVR
SIO_010081: LOC116989735
subclass of: SO_0000673
so part of: LOC116989735
location: join(92645..92936,96368..96933)
location: region:92645-96933:1
so has part: feature:92645-92936:1:exon
so has part: feature:96368-96933:1:exon

XP_032903221.1
type: Protein
SIO_000068: ncbiprotein

position:92645:1
position: 92645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96933:1
position: 96933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92645-92936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96368-96933:1:exon

LOC116989735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116989735 isoform X2
translation: MKRRSKNQLNVSEVNKRDSEREGLKRPSKTQLNVSEMNERDSGRERLKKHSKVNIAPLKTLPNALINLYTGDTPQDHEFRKNIRQYNCLFQLTSFGAKEVVAHGWNPSVIIQGQIYHFIGSLMPDQDQQSKFLLIYFMDPHDSIDLRMSILQDAGIQRDTVEMLENMIRLNNPYIDSLVMTTERIRDLPEASIVIDPNYRPPLEHERRFNTQTANVVAVLIPKSNQPAATSRHIVLSVR
SIO_010081: LOC116989735
subclass of: SO_0000673
so part of: LOC116989735
location: join(92645..92797,96367..96933)
location: region:92645-96933:1
so has part: feature:92645-92797:1:exon
so has part: feature:96367-96933:1:exon

XP_032903222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92645-92797:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96367-96933:1:exon

LOC116989676
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 128800..146766
location: region:128800-146766:1
so has part: feature:128800-146766:1:exon
subclass of: SO_0000010

116989676
type: Gene
SIO_000068: ncbigene

position:128800:1
position: 128800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146766:1
position: 146766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128800-146766:1:exon

LOC116989676
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989676
product: leukocyte receptor cluster member 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047288.1
SIO_010081: LOC116989676
subclass of: SO_0000673
so part of: LOC116989676
location: join(128800..128898,133822..133860,144814..144975,146168..146395,146471..146766)
location: region:128800-146766:1
so has part: feature:128800-128898:1:exon
so has part: feature:133822-133860:1:exon
so has part: feature:144814-144975:1:exon
so has part: feature:146168-146395:1:exon
so has part: feature:146471-146766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128800-128898:1:exon

position:128898:1
position: 128898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133822-133860:1:exon

position:133822:1
position: 133822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133860:1
position: 133860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:144814-144975:1:exon

position:144814:1
position: 144814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144975:1
position: 144975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:146168-146395:1:exon

position:146168:1
position: 146168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146395:1
position: 146395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:146471-146766:1:exon

position:146471:1
position: 146471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989676
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukocyte receptor cluster member 1-like
translation: MFWKPGTLTYRGWKTLHMTEQNGKSFLTNALNSENSENVEKQTSRVARTEFLRKRARLSLPDAPAAEVSTRSLNLFSDGEGDEGRMGGSKEYEEEKRQEKERRERSLGILTYLGQSVWESQTAGPWYARVPEHGTEAEAEKGRKRRMDPLRNMREWLRGGGGKSGGGGGGREGGWRRGGVVSLREERLRREEAERKRAEALLRGVEGQREGEGRKEGEGQREGEGNSRAYNSQFHPELSRRYNKRHR
SIO_010081: LOC116989676
subclass of: SO_0000673
so part of: LOC116989676
location: join(128800..128898,133822..133860,144814..144975,146168..146395,146471..146686)
location: region:128800-146686:1
so has part: feature:128800-128898:1:exon
so has part: feature:133822-133860:1:exon
so has part: feature:144814-144975:1:exon
so has part: feature:146168-146395:1:exon
so has part: feature:146471-146686:1:exon

XP_032903179.1
type: Protein
SIO_000068: ncbiprotein

position:146686:1
position: 146686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128800-128898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133822-133860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144814-144975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146168-146395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:146471-146686:1:exon

trnas-uga
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trnas-uga
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 159724..159805
location: region:159724-159805:1
so has part: feature:159724-159805:1:exon
subclass of: SO_0000663

116989775
type: Gene
SIO_000068: ncbigene

position:159724:1
position: 159724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159805:1
position: 159805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159724-159805:1:exon

trnas-uga
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 386614
gene: trnas-uga
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon UGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:159757..159759,aa:Ser,seq:tga)
SIO_010081: trnas-uga
subclass of: SO_0000673
so part of: trnas-uga
location: 159724..159805
location: region:159724-159805:1
so has part: feature:159724-159805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159724-159805:1:exon

LOC116989737
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989737
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 295732..301001
location: region:295732-301001:1
so has part: feature:295732-301001:1:exon
subclass of: SO_0000011

116989737
type: Gene
SIO_000068: ncbigene

position:295732:1
position: 295732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301001:1
position: 301001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295732-301001:1:exon

LOC116989737
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989737
product: uncharacterized LOC116989737
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416307.1
SIO_010081: LOC116989737
subclass of: SO_0000673
so part of: LOC116989737
location: join(295732..295979,298626..298683,300955..301001)
location: region:295732-301001:1
so has part: feature:295732-295979:1:exon
so has part: feature:298626-298683:1:exon
so has part: feature:300955-301001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295732-295979:1:exon

position:295979:1
position: 295979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:298626-298683:1:exon

position:298626:1
position: 298626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298683:1
position: 298683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:300955-301001:1:exon

position:300955:1
position: 300955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989738
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 301060..323636
location: region:301060-323636:1
so has part: feature:301060-323636:1:exon
subclass of: SO_0000011

116989738
type: Gene
SIO_000068: ncbigene

position:301060:1
position: 301060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323636:1
position: 323636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301060-323636:1:exon

LOC116989738
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989738
product: uncharacterized LOC116989738
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416308.1
SIO_010081: LOC116989738
subclass of: SO_0000673
so part of: LOC116989738
location: join(301060..301395,301456..301464,323605..323636)
location: region:301060-323636:1
so has part: feature:301060-301395:1:exon
so has part: feature:301456-301464:1:exon
so has part: feature:323605-323636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:301060-301395:1:exon

position:301395:1
position: 301395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301456-301464:1:exon

position:301456:1
position: 301456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301464:1
position: 301464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:323605-323636:1:exon

position:323605:1
position: 323605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989736
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989736
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 304357..316082
location: region:304357-316082:1
so has part: feature:304357-316082:1:exon
subclass of: SO_0000011

116989736
type: Gene
SIO_000068: ncbigene

position:304357:1
position: 304357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316082:1
position: 316082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304357-316082:1:exon

LOC116989736
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989736
product: uncharacterized LOC116989736, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416306.1
SIO_010081: LOC116989736
subclass of: SO_0000673
so part of: LOC116989736
location: join(304357..304426,305803..305922,308132..308273)
location: region:304357-308273:1
so has part: feature:304357-304426:1:exon
so has part: feature:305803-305922:1:exon
so has part: feature:308132-308273:1:exon

position:308273:1
position: 308273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304357-304426:1:exon

position:304426:1
position: 304426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:305803-305922:1:exon

position:305803:1
position: 305803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305922:1
position: 305922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308132-308273:1:exon

position:308132:1
position: 308132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989736
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989736
product: uncharacterized LOC116989736, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416305.1
SIO_010081: LOC116989736
subclass of: SO_0000673
so part of: LOC116989736
location: join(305730..305922,308132..308194,316044..316082)
location: region:305730-316082:1
so has part: feature:305730-305922:1:exon
so has part: feature:308132-308194:1:exon
so has part: feature:316044-316082:1:exon

position:305730:1
position: 305730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305730-305922:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308132-308194:1:exon

position:308194:1
position: 308194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:316044-316082:1:exon

position:316044:1
position: 316044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989736
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989736
product: uncharacterized LOC116989736, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416304.1
SIO_010081: LOC116989736
subclass of: SO_0000673
so part of: LOC116989736
location: join(305730..305922,308132..308194,309116..309152)
location: region:305730-309152:1
so has part: feature:305730-305922:1:exon
so has part: feature:308132-308194:1:exon
so has part: feature:309116-309152:1:exon

position:309152:1
position: 309152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305730-305922:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308132-308194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309116-309152:1:exon

position:309116:1
position: 309116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989700
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(416188..418074)
location: region:416188-418074:-1
so has part: feature:416188-418074:-1:exon
subclass of: SO_0000010

116989700
type: Gene
SIO_000068: ncbigene

position:416188:-1
position: 416188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418074:-1
position: 418074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416188-418074:-1:exon

LOC116989700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989700
product: syntaxin-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047296.1
SIO_010081: LOC116989700
subclass of: SO_0000673
so part of: LOC116989700
location: complement(join(416188..416597,418054..418074))
location: region:416188-418074:-1
so has part: feature:418054-418074:-1:exon
so has part: feature:416188-416597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:418054-418074:-1:exon

position:418054:-1
position: 418054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:416188-416597:-1:exon

position:416597:-1
position: 416597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-4-like
translation: MSHKSDTQDIFTANIIQETQVTKQALNEIESRHTEILRLEKSIRELHDMFMYLALEVEAQGELINNIDNAVGSNYVKKAAQAATSRRNSLKKKVCLITCVSILLLIIIAINVAVATTS
SIO_010081: LOC116989700
subclass of: SO_0000673
so part of: LOC116989700
location: complement(join(416262..416597,418054..418074))
location: region:416262-418074:-1
so has part: feature:418054-418074:-1:exon
so has part: feature:416262-416597:-1:exon

XP_032903187.1
type: Protein
SIO_000068: ncbiprotein

position:416262:-1
position: 416262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418054-418074:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:416262-416597:-1:exon

LOC116989739
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989739
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 506401..597460
location: region:506401-597460:1
so has part: feature:506401-597460:1:exon
subclass of: SO_0000010

116989739
type: Gene
SIO_000068: ncbigene

position:506401:1
position: 506401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597460:1
position: 597460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506401-597460:1:exon

LOC116989739
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989739
product: integrin alpha-D-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047332.1
SIO_010081: LOC116989739
subclass of: SO_0000673
so part of: LOC116989739
location: join(506401..506531,515196..515341,515717..515864,530871..531015,538669..538742,539475..539601,547437..547576,548337..548474,549052..549255,554635..554765,557374..557528,565364..565503,566295..566420,568981..569054,569397..569538,584553..584663,585295..585374,585563..585646,585825..585897,591415..591522,591927..591992,592535..592648,593284..593388,593700..593810,596084..597460)
location: region:506401-597460:1
so has part: feature:506401-506531:1:exon
so has part: feature:515196-515341:1:exon
so has part: feature:515717-515864:1:exon
so has part: feature:530871-531015:1:exon
so has part: feature:538669-538742:1:exon
so has part: feature:539475-539601:1:exon
so has part: feature:547437-547576:1:exon
so has part: feature:548337-548474:1:exon
so has part: feature:549052-549255:1:exon
so has part: feature:554635-554765:1:exon
so has part: feature:557374-557528:1:exon
so has part: feature:565364-565503:1:exon
so has part: feature:566295-566420:1:exon
so has part: feature:568981-569054:1:exon
so has part: feature:569397-569538:1:exon
so has part: feature:584553-584663:1:exon
so has part: feature:585295-585374:1:exon
so has part: feature:585563-585646:1:exon
so has part: feature:585825-585897:1:exon
so has part: feature:591415-591522:1:exon
so has part: feature:591927-591992:1:exon
so has part: feature:592535-592648:1:exon
so has part: feature:593284-593388:1:exon
so has part: feature:593700-593810:1:exon
so has part: feature:596084-597460:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:506401-506531:1:exon

position:506531:1
position: 506531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:515196-515341:1:exon

position:515196:1
position: 515196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515341:1
position: 515341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:515717-515864:1:exon

position:515717:1
position: 515717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515864:1
position: 515864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:530871-531015:1:exon

position:530871:1
position: 530871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531015:1
position: 531015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:538669-538742:1:exon

position:538669:1
position: 538669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538742:1
position: 538742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:539475-539601:1:exon

position:539475:1
position: 539475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539601:1
position: 539601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:547437-547576:1:exon

position:547437:1
position: 547437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547576:1
position: 547576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:548337-548474:1:exon

position:548337:1
position: 548337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548474:1
position: 548474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:549052-549255:1:exon

position:549052:1
position: 549052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549255:1
position: 549255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:554635-554765:1:exon

position:554635:1
position: 554635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554765:1
position: 554765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:557374-557528:1:exon

position:557374:1
position: 557374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557528:1
position: 557528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:565364-565503:1:exon

position:565364:1
position: 565364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565503:1
position: 565503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:566295-566420:1:exon

position:566295:1
position: 566295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566420:1
position: 566420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:568981-569054:1:exon

position:568981:1
position: 568981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569054:1
position: 569054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:569397-569538:1:exon

position:569397:1
position: 569397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569538:1
position: 569538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:584553-584663:1:exon

position:584553:1
position: 584553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584663:1
position: 584663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:585295-585374:1:exon

position:585295:1
position: 585295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585374:1
position: 585374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:585563-585646:1:exon

position:585563:1
position: 585563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585646:1
position: 585646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:585825-585897:1:exon

position:585825:1
position: 585825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585897:1
position: 585897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:591415-591522:1:exon

position:591415:1
position: 591415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591522:1
position: 591522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:591927-591992:1:exon

position:591927:1
position: 591927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591992:1
position: 591992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:592535-592648:1:exon

position:592535:1
position: 592535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592648:1
position: 592648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:593284-593388:1:exon

position:593284:1
position: 593284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593388:1
position: 593388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:593700-593810:1:exon

position:593700:1
position: 593700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593810:1
position: 593810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:596084-597460:1:exon

position:596084:1
position: 596084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989739
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989739
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-D-like
translation: MKDFVKAMMTKFASKDTQIAVVQFSDTVRTEFDFRMYNSAPSKTGLVDAIRQKYSGTNTPNGMEYVANRIFNRASGARDNAKRILITITDGESQNHNFQPAIDAAKRKRITRYAIGVGSAFSDTNAKAQLQTIASESGNVFQVGNFQALDQIQNQLQEKIFAIEGTENKGESSFQLEMAQEGISSLVTEDSIVYGAVGAYDWSGGLYQLRSGIQTFINATFDRDSMKNAYLGYSVEEARGSSGRYYVAGAPRYRHRGLVLVYNQHNPSHHTKKIESTQMGSYFGSVLCAVDLNNDGVTDLILVGAPHHSGPATGGMVFVYKFQEGDLSPRTPLIGEGEQPLARFGASIARLGDLNGDSVADVAVGAPLEDGGSGSVYIFLGSADGLKGPAAQHIRSVDMKPSLRFFGRAIHGAMDVSHDGLSDFAVGALGKVVVFRSQPVVDVQVRTTFDPPKIKLKDVDCPKNSQTKPEVLVKMCFTLHELTKKLPESPKFNMFTKMVLDPGRKVQRAEVTKAPPVNFTLQTNQCLKFKIHLENCIQDTYNNIQLDMTYVAKGQRSGMYPAPILKQGSTGIWSSGLPFEQECGSDNICTDRLKVSFSMSGTQFLVVGSHTTLGLDVSLENCGENSYFTVVTFLIPRGLSLRKTTIVQSSRRGKIECNDGTEPAALGLRSVRCLISHPIFRTNSTMKFHTIFDVDPQADWKDTVEISVNASSNNEAHDTRGSFQLKSIIVKYEVNVIIKGIDSTQYINFTTSKAETKTISHAYKVENLEQRSLAVSITFLVHVKIWPGLTWDDLQVSSPWHRVKSCQKKLDLPQIEEMDPSKKCNKTSCALFVCDIQSLRYRDHPVFNIAGNISWSNPALLKAEELKLSSFARVRYDENKYIHISQATTKFKEATVTTRVEVVKEQNMLPVIVGSTVGGLVLLLIVAAVLYKVGFFKRGFKEKLEEATDETGDAGETVDQPSVPQA
SIO_010081: LOC116989739
subclass of: SO_0000673
so part of: LOC116989739
location: join(506478..506531,515196..515341,515717..515864,530871..531015,538669..538742,539475..539601,547437..547576,548337..548474,549052..549255,554635..554765,557374..557528,565364..565503,566295..566420,568981..569054,569397..569538,584553..584663,585295..585374,585563..585646,585825..585897,591415..591522,591927..591992,592535..592648,593284..593388,593700..593810,596084..596188)
location: region:506478-596188:1
so has part: feature:506478-506531:1:exon
so has part: feature:515196-515341:1:exon
so has part: feature:515717-515864:1:exon
so has part: feature:530871-531015:1:exon
so has part: feature:538669-538742:1:exon
so has part: feature:539475-539601:1:exon
so has part: feature:547437-547576:1:exon
so has part: feature:548337-548474:1:exon
so has part: feature:549052-549255:1:exon
so has part: feature:554635-554765:1:exon
so has part: feature:557374-557528:1:exon
so has part: feature:565364-565503:1:exon
so has part: feature:566295-566420:1:exon
so has part: feature:568981-569054:1:exon
so has part: feature:569397-569538:1:exon
so has part: feature:584553-584663:1:exon
so has part: feature:585295-585374:1:exon
so has part: feature:585563-585646:1:exon
so has part: feature:585825-585897:1:exon
so has part: feature:591415-591522:1:exon
so has part: feature:591927-591992:1:exon
so has part: feature:592535-592648:1:exon
so has part: feature:593284-593388:1:exon
so has part: feature:593700-593810:1:exon
so has part: feature:596084-596188:1:exon

XP_032903223.1
type: Protein
SIO_000068: ncbiprotein

position:506478:1
position: 506478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596188:1
position: 596188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506478-506531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515196-515341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:515717-515864:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530871-531015:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:538669-538742:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:539475-539601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547437-547576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:548337-548474:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:549052-549255:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:554635-554765:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:557374-557528:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:565364-565503:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:566295-566420:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:568981-569054:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:569397-569538:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:584553-584663:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:585295-585374:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:585563-585646:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:585825-585897:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:591415-591522:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:591927-591992:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:592535-592648:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:593284-593388:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:593700-593810:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:596084-596188:1:exon

LOC116989767
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989767
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 575086..575192
location: region:575086-575192:1
so has part: feature:575086-575192:1:exon
subclass of: SO_0000623

116989767
type: Gene
SIO_000068: ncbigene

position:575086:1
position: 575086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575192:1
position: 575192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575086-575192:1:exon

LOC116989767
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snRNA
gene: LOC116989767
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004416316.1
SIO_010081: LOC116989767
subclass of: SO_0000673
so part of: LOC116989767
location: 575086..575192
location: region:575086-575192:1
so has part: feature:575086-575192:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:575086-575192:1:exon

LOC116989741
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(694357..734710)
location: region:694357-734710:-1
so has part: feature:694357-734710:-1:exon
subclass of: SO_0000010

116989741
type: Gene
SIO_000068: ncbigene

position:694357:-1
position: 694357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734710:-1
position: 734710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694357-734710:-1:exon

LOC116989741
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989741
product: integrin alpha-X-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047333.1
SIO_010081: LOC116989741
subclass of: SO_0000673
so part of: LOC116989741
location: complement(join(694357..696121,701673..701783,702095..702199,702466..702579,706078..706143,706555..706662,716615..716687,717054..717137,717339..717418,717741..717851,731251..731392,731708..731781,733700..733825,734585..734710))
location: region:694357-734710:-1
so has part: feature:734585-734710:-1:exon
so has part: feature:733700-733825:-1:exon
so has part: feature:731708-731781:-1:exon
so has part: feature:731251-731392:-1:exon
so has part: feature:717741-717851:-1:exon
so has part: feature:717339-717418:-1:exon
so has part: feature:717054-717137:-1:exon
so has part: feature:716615-716687:-1:exon
so has part: feature:706555-706662:-1:exon
so has part: feature:706078-706143:-1:exon
so has part: feature:702466-702579:-1:exon
so has part: feature:702095-702199:-1:exon
so has part: feature:701673-701783:-1:exon
so has part: feature:694357-696121:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:734585-734710:-1:exon

position:734585:-1
position: 734585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:733700-733825:-1:exon

position:733700:-1
position: 733700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733825:-1
position: 733825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:731708-731781:-1:exon

position:731708:-1
position: 731708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731781:-1
position: 731781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:731251-731392:-1:exon

position:731251:-1
position: 731251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731392:-1
position: 731392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:717741-717851:-1:exon

position:717741:-1
position: 717741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717851:-1
position: 717851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:717339-717418:-1:exon

position:717339:-1
position: 717339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717418:-1
position: 717418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:717054-717137:-1:exon

position:717054:-1
position: 717054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717137:-1
position: 717137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:716615-716687:-1:exon

position:716615:-1
position: 716615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716687:-1
position: 716687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:706555-706662:-1:exon

position:706555:-1
position: 706555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706662:-1
position: 706662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:706078-706143:-1:exon

position:706078:-1
position: 706078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706143:-1
position: 706143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:702466-702579:-1:exon

position:702466:-1
position: 702466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702579:-1
position: 702579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:702095-702199:-1:exon

position:702095:-1
position: 702095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702199:-1
position: 702199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:701673-701783:-1:exon

position:701673:-1
position: 701673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701783:-1
position: 701783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:694357-696121:-1:exon

position:696121:-1
position: 696121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989741
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-X-like
translation: MLTKMVLDPGRMIQRAEVTENPPVNFALQINQCLNFKIQLENCIQDTYNNIQLDMTYVAKGQRSGIYPAPILKQGSTGIWSSGLPFEQECGSDNICTDRLKVSFSMSGTQFLVVGSHTTLGLDVSLENCGENSYFTVVTFLIPRGLSFRKTTIVQSSRRGKIECDDGMEPAALGLRSVRCLISHPIFRTNSMMKFHTIFDVDPQADWKDTVEISINASSNNEAHDTRGSFQLKSIIVKYEVNVIIKGIDSTQYINFTMSKAETKPISHAYKVENLEQRSLAVSITFLVHVKIWPGLTWDDLQLSSSWHGDKSCQQKMDLPQIEAMDPSKKCNKTTCALFVCDIQSLRIRESLIFNIAGNISWSNPALLKAEELKLSSFARVRYDENKYIHISQATTKFKEATVTTRVEMVKEQNMLPVIVGSTVGGLVLLLIVAAVLYKVGFFKRGFKEKLEEATDEAGDAGEMVDQPSVSQA
SIO_010081: LOC116989741
subclass of: SO_0000673
so part of: LOC116989741
location: complement(join(696017..696121,701673..701783,702095..702199,702466..702579,706078..706143,706555..706662,716615..716687,717054..717137,717339..717418,717741..717851,731251..731392,731708..731781,733700..733825,734585..734707))
location: region:696017-734707:-1
so has part: feature:734585-734707:-1:exon
so has part: feature:733700-733825:-1:exon
so has part: feature:731708-731781:-1:exon
so has part: feature:731251-731392:-1:exon
so has part: feature:717741-717851:-1:exon
so has part: feature:717339-717418:-1:exon
so has part: feature:717054-717137:-1:exon
so has part: feature:716615-716687:-1:exon
so has part: feature:706555-706662:-1:exon
so has part: feature:706078-706143:-1:exon
so has part: feature:702466-702579:-1:exon
so has part: feature:702095-702199:-1:exon
so has part: feature:701673-701783:-1:exon
so has part: feature:696017-696121:-1:exon

XP_032903224.1
type: Protein
SIO_000068: ncbiprotein

position:696017:-1
position: 696017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734707:-1
position: 734707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734585-734707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:733700-733825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:731708-731781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731251-731392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:717741-717851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:717339-717418:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:717054-717137:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:716615-716687:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706555-706662:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:706078-706143:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:702466-702579:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:702095-702199:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:701673-701783:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:696017-696121:-1:exon

LOC116989701
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(739754..878780)
location: region:739754-878780:-1
so has part: feature:739754-878780:-1:exon
subclass of: SO_0000010

116989701
type: Gene
SIO_000068: ncbigene

position:739754:-1
position: 739754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878780:-1
position: 878780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:739754-878780:-1:exon

LOC116989701
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989701
product: integrin alpha-X-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047298.1
SIO_010081: LOC116989701
subclass of: SO_0000673
so part of: LOC116989701
location: complement(join(739754..739809,749497..749651,751614..751744,769266..769472,770040..770177,771183..771322,789919..790045,791033..791106,798608..798752,799336..799483,799753..799898,812887..813017,816217..816331,827002..827060,828334..828440,830252..830369,855373..855528,878569..878780))
location: region:739754-878780:-1
so has part: feature:878569-878780:-1:exon
so has part: feature:855373-855528:-1:exon
so has part: feature:830252-830369:-1:exon
so has part: feature:828334-828440:-1:exon
so has part: feature:827002-827060:-1:exon
so has part: feature:816217-816331:-1:exon
so has part: feature:812887-813017:-1:exon
so has part: feature:799753-799898:-1:exon
so has part: feature:799336-799483:-1:exon
so has part: feature:798608-798752:-1:exon
so has part: feature:791033-791106:-1:exon
so has part: feature:789919-790045:-1:exon
so has part: feature:771183-771322:-1:exon
so has part: feature:770040-770177:-1:exon
so has part: feature:769266-769472:-1:exon
so has part: feature:751614-751744:-1:exon
so has part: feature:749497-749651:-1:exon
so has part: feature:739754-739809:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:878569-878780:-1:exon

position:878569:-1
position: 878569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:855373-855528:-1:exon

position:855373:-1
position: 855373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855528:-1
position: 855528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:830252-830369:-1:exon

position:830252:-1
position: 830252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830369:-1
position: 830369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:828334-828440:-1:exon

position:828334:-1
position: 828334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828440:-1
position: 828440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:827002-827060:-1:exon

position:827002:-1
position: 827002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827060:-1
position: 827060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:816217-816331:-1:exon

position:816217:-1
position: 816217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816331:-1
position: 816331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:812887-813017:-1:exon

position:812887:-1
position: 812887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813017:-1
position: 813017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:799753-799898:-1:exon

position:799753:-1
position: 799753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799898:-1
position: 799898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:799336-799483:-1:exon

position:799336:-1
position: 799336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799483:-1
position: 799483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:798608-798752:-1:exon

position:798608:-1
position: 798608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798752:-1
position: 798752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:791033-791106:-1:exon

position:791033:-1
position: 791033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791106:-1
position: 791106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:789919-790045:-1:exon

position:789919:-1
position: 789919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790045:-1
position: 790045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:771183-771322:-1:exon

position:771183:-1
position: 771183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771322:-1
position: 771322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:770040-770177:-1:exon

position:770040:-1
position: 770040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770177:-1
position: 770177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:769266-769472:-1:exon

position:769266:-1
position: 769266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769472:-1
position: 769472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:751614-751744:-1:exon

position:751614:-1
position: 751614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751744:-1
position: 751744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:749497-749651:-1:exon

position:749497:-1
position: 749497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749651:-1
position: 749651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:739754-739809:-1:exon

position:739809:-1
position: 739809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989701
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-X-like
translation: MDILLWTFIWLSLGQCPVGGFNVEMDDPTVFTQDIPSHFGFTVALFKGDTENWILVGAPLSEDQKGSATGAVYKCRYRDKSCSKLNIPEIPGTNNIGLSMTTGENRAVVCIPRFSYECFTNTYINGFCYDIDRTLNCFTRVPKNLPVCPKVILDLAFLIDGSGSVHGTDFGKMKVFVKAMMTKFASKDTQIAVVQFSHTVRTEFDFRKYNSAPSKTGLVDAIGQTGGGTDTPNGMEYVINHIFIPESGARDNAKRILITITDGESQNNNFQPAIDAAKHKCITRYAIGVGSAFSDTNAKAQLQTIASESGNVFQVGNFQALDQIQNQLQEKIFAIEGTENKGESSFQLEMAQEGISSLVTEDSIVYGAVGAYDWSGGLYQSRSGIQTFINATFDRDSMKNAYLGYSVEEARGSSGRYYVAGAPRYRHRGLVLVYNQSSLSDHTKKIESTQLGSYFGSVLCAVDLNNDGVTDLILVGAPHHSGPATGGMVFVYKFHEGDLSPRTPLIGEGGEQPLARFGASIARLGDLNGDSVADVAVGAPLEDGRSGSVYIFLGSADGLKGPAAQHIRSADVEPGLQFFGRAIHGAMDVNRDGLSDIAVGALGKVVVFRSQPVVDVEVHTTFDPPKIKQKDVDCPKNSQRKPEVLVKMCFNLREVTKKLPDGKYSSRTLSISCGSKQR
SIO_010081: LOC116989701
subclass of: SO_0000673
so part of: LOC116989701
location: complement(join(739754..739809,749497..749651,751614..751744,769266..769472,770040..770177,771183..771322,789919..790045,791033..791106,798608..798752,799336..799483,799753..799898,812887..813017,816217..816331,827002..827060,828334..828440,830252..830369,855373..855412))
location: region:739754-855412:-1
so has part: feature:855373-855412:-1:exon
so has part: feature:830252-830369:-1:exon
so has part: feature:828334-828440:-1:exon
so has part: feature:827002-827060:-1:exon
so has part: feature:816217-816331:-1:exon
so has part: feature:812887-813017:-1:exon
so has part: feature:799753-799898:-1:exon
so has part: feature:799336-799483:-1:exon
so has part: feature:798608-798752:-1:exon
so has part: feature:791033-791106:-1:exon
so has part: feature:789919-790045:-1:exon
so has part: feature:771183-771322:-1:exon
so has part: feature:770040-770177:-1:exon
so has part: feature:769266-769472:-1:exon
so has part: feature:751614-751744:-1:exon
so has part: feature:749497-749651:-1:exon
so has part: feature:739754-739809:-1:exon

XP_032903189.1
type: Protein
SIO_000068: ncbiprotein

position:855412:-1
position: 855412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:855373-855412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830252-830369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828334-828440:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827002-827060:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:816217-816331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:812887-813017:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:799753-799898:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799336-799483:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:798608-798752:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:791033-791106:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789919-790045:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:771183-771322:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:770040-770177:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:769266-769472:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:751614-751744:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:749497-749651:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:739754-739809:-1:exon

LOC116989703
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1137544..1137909
location: region:1137544-1137909:1
so has part: feature:1137544-1137909:1:exon
subclass of: SO_0000010

116989703
type: Gene
SIO_000068: ncbigene

position:1137544:1
position: 1137544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137909:1
position: 1137909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1137544-1137909:1:exon

LOC116989703
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989703
product: histone H2B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047299.1
SIO_010081: LOC116989703
subclass of: SO_0000673
so part of: LOC116989703
location: 1137544..1137909
location: region:1137544-1137909:1
so has part: feature:1137544-1137909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1137544-1137909:1:exon

LOC116989703
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2B-like
translation: MFEQQKTAPKKGAKKTLLKPAGKKRKRSKKQSYSIYIYKVMKQVHPDTGISSKAMSIMSSFINDIFERIAGEASRLSHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
SIO_010081: LOC116989703
subclass of: SO_0000673
so part of: LOC116989703
location: 1137544..1137909
location: region:1137544-1137909:1
so has part: feature:1137544-1137909:1:exon

XP_032903190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1137544-1137909:1:exon

LOC116989704
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1144111..1144422)
location: region:1144111-1144422:-1
so has part: feature:1144111-1144422:-1:exon
subclass of: SO_0000010

116989704
type: Gene
SIO_000068: ncbigene

position:1144111:-1
position: 1144111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144422:-1
position: 1144422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144111-1144422:-1:exon

LOC116989704
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989704
product: histone H4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins
transcript id: XM_033047300.1
SIO_010081: LOC116989704
subclass of: SO_0000673
so part of: LOC116989704
location: complement(1144111..1144422)
location: region:1144111-1144422:-1
so has part: feature:1144111-1144422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1144111-1144422:-1:exon

LOC116989704
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H4-like
translation: MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEEVRGVLKVFLENVIRDSVTYTEHAKRKTVIAMDVVYALKRQGRTLYGFGG
SIO_010081: LOC116989704
subclass of: SO_0000673
so part of: LOC116989704
location: complement(1144111..1144422)
location: region:1144111-1144422:-1
so has part: feature:1144111-1144422:-1:exon

XP_032903191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1144111-1144422:-1:exon

LOC116989745
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1161439..1162044)
location: region:1161439-1162044:-1
so has part: feature:1161439-1162044:-1:exon
subclass of: SO_0000010

116989745
type: Gene
SIO_000068: ncbigene

position:1161439:-1
position: 1161439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162044:-1
position: 1162044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1161439-1162044:-1:exon

LOC116989745
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989745
product: histone H3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047340.1
SIO_010081: LOC116989745
subclass of: SO_0000673
so part of: LOC116989745
location: complement(1161439..1162044)
location: region:1161439-1162044:-1
so has part: feature:1161439-1162044:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1161439-1162044:-1:exon

LOC116989745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3-like
translation: MARTKQTARRSTGGKAPRKQLTTKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSSIMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
SIO_010081: LOC116989745
subclass of: SO_0000673
so part of: LOC116989745
location: complement(1161577..1161987)
location: region:1161577-1161987:-1
so has part: feature:1161577-1161987:-1:exon

XP_032903231.1
type: Protein
SIO_000068: ncbiprotein

position:1161577:-1
position: 1161577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161987:-1
position: 1161987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1161577-1161987:-1:exon

LOC116989705
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989705
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1173032..1199304)
location: region:1173032-1199304:-1
so has part: feature:1173032-1199304:-1:exon

116989705
type: Gene
SIO_000068: ncbigene

position:1173032:-1
position: 1173032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199304:-1
position: 1199304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173032-1199304:-1:exon

LOC116989705
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116989705
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116989705
subclass of: SO_0000673
so part of: LOC116989705
location: complement(1173032..1173462)
location: region:1173032-1173462:-1
so has part: feature:1173032-1173462:-1:exon

position:1173462:-1
position: 1173462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173032-1173462:-1:exon

LOC116989705
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116989705
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116989705
subclass of: SO_0000673
so part of: LOC116989705
location: complement(1194938..1195021)
location: region:1194938-1195021:-1
so has part: feature:1194938-1195021:-1:exon

position:1194938:-1
position: 1194938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1195021:-1
position: 1195021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194938-1195021:-1:exon

LOC116989705
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116989705
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116989705
subclass of: SO_0000673
so part of: LOC116989705
location: complement(1198895..1199304)
location: region:1198895-1199304:-1
so has part: feature:1198895-1199304:-1:exon

position:1198895:-1
position: 1198895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198895-1199304:-1:exon

LOC116989746
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1205044..1209620)
location: region:1205044-1209620:-1
so has part: feature:1205044-1209620:-1:exon
subclass of: SO_0000010

116989746
type: Gene
SIO_000068: ncbigene

position:1205044:-1
position: 1205044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209620:-1
position: 1209620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205044-1209620:-1:exon

LOC116989746
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989746
product: histone H2A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047342.1
SIO_010081: LOC116989746
subclass of: SO_0000673
so part of: LOC116989746
location: complement(join(1205044..1205081,1209257..1209620))
location: region:1205044-1209620:-1
so has part: feature:1209257-1209620:-1:exon
so has part: feature:1205044-1205081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1209257-1209620:-1:exon

position:1209257:-1
position: 1209257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1205044-1205081:-1:exon

position:1205081:-1
position: 1205081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989746
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A-like isoform X2
translation: MSGRGKTGGKGRAKTKTRSSRSGLQFPVGRIHRLLRKGHYAERIGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTESNKDKNSSRSL
SIO_010081: LOC116989746
subclass of: SO_0000673
so part of: LOC116989746
location: complement(join(1205044..1205081,1209257..1209620))
location: region:1205044-1209620:-1
so has part: feature:1209257-1209620:-1:exon
so has part: feature:1205044-1205081:-1:exon

XP_032903233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1209257-1209620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205044-1205081:-1:exon

LOC116989746
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989746
product: histone H2A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 123 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047341.1
SIO_010081: LOC116989746
subclass of: SO_0000673
so part of: LOC116989746
location: complement(1209208..1209620)
location: region:1209208-1209620:-1
so has part: feature:1209208-1209620:-1:exon

position:1209208:-1
position: 1209208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209208-1209620:-1:exon

LOC116989746
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A-like isoform X1
translation: MSGRGKTGGKGRAKTKTRSSRSGLQFPVGRIHRLLRKGHYAERIGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGHPSKIYI
SIO_010081: LOC116989746
subclass of: SO_0000673
so part of: LOC116989746
location: complement(1209231..1209620)
location: region:1209231-1209620:-1
so has part: feature:1209231-1209620:-1:exon

XP_032903232.1
type: Protein
SIO_000068: ncbiprotein

position:1209231:-1
position: 1209231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209231-1209620:-1:exon

LOC116989706
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1262812..1263846
location: region:1262812-1263846:1
so has part: feature:1262812-1263846:1:exon
subclass of: SO_0000010

116989706
type: Gene
SIO_000068: ncbigene

position:1262812:1
position: 1262812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263846:1
position: 1263846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1262812-1263846:1:exon

LOC116989706
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989706
product: histone H1.1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins
transcript id: XM_033047301.1
SIO_010081: LOC116989706
subclass of: SO_0000673
so part of: LOC116989706
location: 1262812..1263846
location: region:1262812-1263846:1
so has part: feature:1262812-1263846:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1262812-1263846:1:exon

LOC116989706
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1.1-like
translation: MAEDERPEFPGDFGRRGGVGAEGGGGGGGSDTTPPQDRPAPDKGAAVKKRRRLRRRQQQQVQQQPKRVKLPKKPPFGPTVTERVLSVAESSMERRGISLAALKKALFAKGYDVGRNNSRVNRTVRLLVQRGSLVRTSGTGASGSFRFNRTVVPRMKKKVGTARRKVESRREKKAGTARRKVASRREKKAGAARRKVAPKREKKARAARRKVASKRVKKAGATRRKVASKRVKKAGATRRKVASKRVKKVGAPGRRSPKRQTKPRRTAARPFKRHPTTFRSALCQAPVPPPAQQKQTQDNAGLLSAPVDQKQEGDPQTNKRPVGRPRKTRTQGLVEVDNSLVIDW
SIO_010081: LOC116989706
subclass of: SO_0000673
so part of: LOC116989706
location: 1262812..1263846
location: region:1262812-1263846:1
so has part: feature:1262812-1263846:1:exon

XP_032903192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1262812-1263846:1:exon

LOC116989747
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989747
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1324538..1324913)
location: region:1324538-1324913:-1
so has part: feature:1324538-1324913:-1:exon
subclass of: SO_0000010

116989747
type: Gene
SIO_000068: ncbigene

position:1324538:-1
position: 1324538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324913:-1
position: 1324913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1324538-1324913:-1:exon

LOC116989747
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989747
product: histone H2B 8-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047343.1
SIO_010081: LOC116989747
subclass of: SO_0000673
so part of: LOC116989747
location: complement(1324538..1324913)
location: region:1324538-1324913:-1
so has part: feature:1324538-1324913:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1324538-1324913:-1:exon

LOC116989747
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989747
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2B 8-like
translation: MPESVSKRGASKTGAKKAPSKKIGKGETRQKKTRKHTYSVYIHKVLKQVHPDTCISSSAMNIINSFIDDIFERIASEASRLIRYSKRLTISSREIQTSVRLLLPGELAKHAVSEGTKAVTKYTR
SIO_010081: LOC116989747
subclass of: SO_0000673
so part of: LOC116989747
location: complement(1324539..1324913)
location: region:1324539-1324913:-1
so has part: feature:1324539-1324913:-1:exon

XP_032903234.1
type: Protein
SIO_000068: ncbiprotein

position:1324539:-1
position: 1324539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1324539-1324913:-1:exon

LOC116989708
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989708
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1325970..1326367)
location: region:1325970-1326367:-1
so has part: feature:1325970-1326367:-1:exon
subclass of: SO_0000010

116989708
type: Gene
SIO_000068: ncbigene

position:1325970:-1
position: 1325970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326367:-1
position: 1326367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1325970-1326367:-1:exon

LOC116989708
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989708
product: histone H2B 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047305.1
SIO_010081: LOC116989708
subclass of: SO_0000673
so part of: LOC116989708
location: complement(1325970..1326367)
location: region:1325970-1326367:-1
so has part: feature:1325970-1326367:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1325970-1326367:-1:exon

LOC116989708
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989708
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2B 5-like
translation: MPELGSKRRASKKVAKKAPTKKTSKGETKQRKARKHSYRVYIHKVLKQVHPDTSISSSAMNIINSFIDDIFERIASEASRLIRYSKRLTISSREIQTSVRLLLPGELAKHAVSEGTKAVTKYTSSR
SIO_010081: LOC116989708
subclass of: SO_0000673
so part of: LOC116989708
location: complement(1325987..1326367)
location: region:1325987-1326367:-1
so has part: feature:1325987-1326367:-1:exon

XP_032903196.1
type: Protein
SIO_000068: ncbiprotein

position:1325987:-1
position: 1325987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1325987-1326367:-1:exon

LOC116989750
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1333537..1333914
location: region:1333537-1333914:1
so has part: feature:1333537-1333914:1:exon
subclass of: SO_0000010

116989750
type: Gene
SIO_000068: ncbigene

position:1333537:1
position: 1333537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333914:1
position: 1333914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1333537-1333914:1:exon

LOC116989750
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989750
product: histone H2B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 112 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047345.1
SIO_010081: LOC116989750
subclass of: SO_0000673
so part of: LOC116989750
location: 1333537..1333914
location: region:1333537-1333914:1
so has part: feature:1333537-1333914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1333537-1333914:1:exon

LOC116989750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2B-like
translation: MFEQQKSAPKKGAKKTLPKLVGKKRKKSRKQSYSIYIYKVMKQVHPDTGISSKAMSIMSSFVNDIFERIAGEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
SIO_010081: LOC116989750
subclass of: SO_0000673
so part of: LOC116989750
location: 1333537..1333902
location: region:1333537-1333902:1
so has part: feature:1333537-1333902:1:exon

XP_032903236.1
type: Protein
SIO_000068: ncbiprotein

position:1333902:1
position: 1333902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1333537-1333902:1:exon

LOC116989744
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989744
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1370940..1371937)
location: region:1370940-1371937:-1
so has part: feature:1370940-1371937:-1:exon
subclass of: SO_0000010

116989744
type: Gene
SIO_000068: ncbigene

position:1370940:-1
position: 1370940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371937:-1
position: 1371937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1370940-1371937:-1:exon

LOC116989744
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989744
product: histone H3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 521 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047339.1
SIO_010081: LOC116989744
subclass of: SO_0000673
so part of: LOC116989744
location: complement(1370940..1371937)
location: region:1370940-1371937:-1
so has part: feature:1370940-1371937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1370940-1371937:-1:exon

LOC116989744
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989744
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3
translation: MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
SIO_010081: LOC116989744
subclass of: SO_0000673
so part of: LOC116989744
location: complement(1371501..1371911)
location: region:1371501-1371911:-1
so has part: feature:1371501-1371911:-1:exon

XP_032903230.1
type: Protein
SIO_000068: ncbiprotein

position:1371501:-1
position: 1371501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371911:-1
position: 1371911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1371501-1371911:-1:exon

LOC116989742
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1493315..1520369
location: region:1493315-1520369:1
so has part: feature:1493315-1520369:1:exon
subclass of: SO_0000010

116989742
type: Gene
SIO_000068: ncbigene

position:1493315:1
position: 1493315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1520369:1
position: 1520369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493315-1520369:1:exon

LOC116989742
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: LOC116989742
product: nuclear factor 7, brain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004416309.1
SIO_010081: LOC116989742
so part of: LOC116989742
location: join(1493315..1493484,1493547..1494055,1494146..1494241,1498103..1498336,1508269..1508291,1508388..1508506,1513458..1513547,1517516..1517576,1520025..1520369)
location: region:1493315-1520369:1
so has part: feature:1493315-1493484:1:exon
so has part: feature:1493547-1494055:1:exon
so has part: feature:1494146-1494241:1:exon
so has part: feature:1498103-1498336:1:exon
so has part: feature:1508269-1508291:1:exon
so has part: feature:1508388-1508506:1:exon
so has part: feature:1513458-1513547:1:exon
so has part: feature:1517516-1517576:1:exon
so has part: feature:1520025-1520369:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1493315-1493484:1:exon

position:1493484:1
position: 1493484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1493547-1494055:1:exon

position:1493547:1
position: 1493547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1494055:1
position: 1494055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1494146-1494241:1:exon

position:1494146:1
position: 1494146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1494241:1
position: 1494241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1498103-1498336:1:exon

position:1498103:1
position: 1498103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498336:1
position: 1498336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1508269-1508291:1:exon

position:1508269:1
position: 1508269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1508291:1
position: 1508291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1508388-1508506:1:exon

position:1508388:1
position: 1508388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1508506:1
position: 1508506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1513458-1513547:1:exon

position:1513458:1
position: 1513458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513547:1
position: 1513547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1517516-1517576:1:exon

position:1517516:1
position: 1517516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1517576:1
position: 1517576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1520025-1520369:1:exon

position:1520025:1
position: 1520025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989742
product: nuclear factor 7, brain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033047335.1
SIO_010081: LOC116989742
subclass of: SO_0000673
so part of: LOC116989742
location: join(1493319..1493484,1493547..1494055,1498103..1498336,1508269..1508291,1508388..1508506,1511719..1512260,1512621..1512625,1513026..1513308)
location: region:1493319-1513308:1
so has part: feature:1493319-1493484:1:exon
so has part: feature:1493547-1494055:1:exon
so has part: feature:1498103-1498336:1:exon
so has part: feature:1508269-1508291:1:exon
so has part: feature:1508388-1508506:1:exon
so has part: feature:1511719-1512260:1:exon
so has part: feature:1512621-1512625:1:exon
so has part: feature:1513026-1513308:1:exon

position:1493319:1
position: 1493319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513308:1
position: 1513308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493319-1493484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1493547-1494055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1498103-1498336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1508269-1508291:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1508388-1508506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1511719-1512260:1:exon

position:1511719:1
position: 1511719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1512260:1
position: 1512260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1512621-1512625:1:exon

position:1512621:1
position: 1512621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1512625:1
position: 1512625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1513026-1513308:1:exon

position:1513026:1
position: 1513026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989742
product: nuclear factor 7, brain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033047334.1
SIO_010081: LOC116989742
subclass of: SO_0000673
so part of: LOC116989742
location: join(1493320..1493484,1493547..1494055,1494146..1494241,1498103..1498336,1508269..1508291,1508388..1508506,1511719..1512260,1512621..1512625,1513026..1513308)
location: region:1493320-1513308:1
so has part: feature:1493320-1493484:1:exon
so has part: feature:1493547-1494055:1:exon
so has part: feature:1494146-1494241:1:exon
so has part: feature:1498103-1498336:1:exon
so has part: feature:1508269-1508291:1:exon
so has part: feature:1508388-1508506:1:exon
so has part: feature:1511719-1512260:1:exon
so has part: feature:1512621-1512625:1:exon
so has part: feature:1513026-1513308:1:exon

position:1493320:1
position: 1493320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493320-1493484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1493547-1494055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1494146-1494241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1498103-1498336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1508269-1508291:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1508388-1508506:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1511719-1512260:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1512621-1512625:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1513026-1513308:1:exon

LOC116989742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc-binding protein A33-like isoform X1
translation: MASKEQIESWTELAICPICLDFFTDPVSLECGHNFCRSCITQCWEREGRNSCPECREVFRDRTVRVNRVLANLSEKARILHLNPKEKDEKLYCEKHQEELKLFCETDKKLICVICRDAREHRDHRFLPREEAVEIYKDKVKSCFEIFTEKKSRIQQMEQRQKLNIYRIREQSNSLQSHITSQFADLHQILTEKEQRLLRNLLEEEKSILIPMEQNLQEIKKKLHSIQEELAKLQEQMDQKDGMIFLKEEAHQERRVNDDGQVLSVADGALPIGKFDQPFLLNTVLRDVVEVMKRVSVTLDVETGKTNLEVSKDRRSVRWAKTEMSLPDTGTRLTVWECVLGSEGFTSGRHYWEVKVASNRVWSVGVAAKSVKRRQWVALVPEAGIWTIGRQSDGFNVNTSPRSRLPANLIPSRVGVYLSYESGIVSFYNADTKSHLHTFAVNKFTEKLYPLFGTWDIKQWLTICSGSAPGV
SIO_010081: LOC116989742
subclass of: SO_0000673
so part of: LOC116989742
location: join(1493645..1494055,1494146..1494241,1498103..1498336,1508269..1508291,1508388..1508506,1511719..1512251)
location: region:1493645-1512251:1
so has part: feature:1493645-1494055:1:exon
so has part: feature:1494146-1494241:1:exon
so has part: feature:1498103-1498336:1:exon
so has part: feature:1508269-1508291:1:exon
so has part: feature:1508388-1508506:1:exon
so has part: feature:1511719-1512251:1:exon

XP_032903225.1
type: Protein
SIO_000068: ncbiprotein

position:1493645:1
position: 1493645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1512251:1
position: 1512251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493645-1494055:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1494146-1494241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1498103-1498336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1508269-1508291:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1508388-1508506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1511719-1512251:1:exon

LOC116989742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 7, brain-like isoform X2
translation: MASKEQIESWTELAICPICLDFFTDPVSLECGHNFCRSCITQCWEREGRNSCPECREVFRDRTVRVNRVLANLSEKARILHLNPKEKDEKLYCEKHQEELKLFCETDKKLICVICRDAREHRDHRFLPREEAVEIYKEQSNSLQSHITSQFADLHQILTEKEQRLLRNLLEEEKSILIPMEQNLQEIKKKLHSIQEELAKLQEQMDQKDGMIFLKEEAHQERRVNDDGQVLSVADGALPIGKFDQPFLLNTVLRDVVEVMKRVSVTLDVETGKTNLEVSKDRRSVRWAKTEMSLPDTGTRLTVWECVLGSEGFTSGRHYWEVKVASNRVWSVGVAAKSVKRRQWVALVPEAGIWTIGRQSDGFNVNTSPRSRLPANLIPSRVGVYLSYESGIVSFYNADTKSHLHTFAVNKFTEKLYPLFGTWDIKQWLTICSGSAPGV
SIO_010081: LOC116989742
subclass of: SO_0000673
so part of: LOC116989742
location: join(1493645..1494055,1498103..1498336,1508269..1508291,1508388..1508506,1511719..1512251)
location: region:1493645-1512251:1
so has part: feature:1493645-1494055:1:exon
so has part: feature:1498103-1498336:1:exon
so has part: feature:1508269-1508291:1:exon
so has part: feature:1508388-1508506:1:exon
so has part: feature:1511719-1512251:1:exon

XP_032903226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1493645-1494055:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1498103-1498336:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1508269-1508291:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1508388-1508506:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1511719-1512251:1:exon

LOC116989709
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1596199..1597005)
location: region:1596199-1597005:-1
so has part: feature:1596199-1597005:-1:exon
subclass of: SO_0000010

116989709
type: Gene
SIO_000068: ncbigene

position:1596199:-1
position: 1596199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1597005:-1
position: 1597005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1596199-1597005:-1:exon

LOC116989709
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989709
product: histone H1.1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_033047306.1
SIO_010081: LOC116989709
subclass of: SO_0000673
so part of: LOC116989709
location: complement(1596199..1597005)
location: region:1596199-1597005:-1
so has part: feature:1596199-1597005:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1596199-1597005:-1:exon

LOC116989709
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1.1-like
translation: MAENQKLEFPGDSGGRGGGGADGGGGGSDTIPPQARPAPDKGAAVKKKGRPRKQQQVQPKRVKLPKKAPVGPTVTERVLSVAASSMERRGISLVALKKALSAMGYDVSHNNSRVNRTVRQLVQRGSLVRTSGTGASGSFRFNRTAAPKREKAGVARRMVASKREKKVAAALRKPTTAPSKRSATRRTKHQSRTADRPFKRRPRTVGRPHAKARSRLQPRGDGPRATRVYRKHQSVRSRKAARGRIQRKVVRPRKIRTQGLVEGTILAC
SIO_010081: LOC116989709
subclass of: SO_0000673
so part of: LOC116989709
location: complement(1596199..1597005)
location: region:1596199-1597005:-1
so has part: feature:1596199-1597005:-1:exon

XP_032903197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1596199-1597005:-1:exon

LOC116989743
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989743
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1673159..1678236)
location: region:1673159-1678236:-1
so has part: feature:1673159-1678236:-1:exon
subclass of: SO_0000010

116989743
type: Gene
SIO_000068: ncbigene

position:1673159:-1
position: 1673159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678236:-1
position: 1678236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1673159-1678236:-1:exon

LOC116989743
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989743
product: histone H1.1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033047337.1
SIO_010081: LOC116989743
subclass of: SO_0000673
so part of: LOC116989743
location: complement(join(1673159..1673419,1677512..1678236))
location: region:1673159-1678236:-1
so has part: feature:1677512-1678236:-1:exon
so has part: feature:1673159-1673419:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1677512-1678236:-1:exon

position:1677512:-1
position: 1677512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1673159-1673419:-1:exon

position:1673419:-1
position: 1673419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989743
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989743
product: histone H1.1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033047338.1
SIO_010081: LOC116989743
subclass of: SO_0000673
so part of: LOC116989743
location: complement(join(1677013..1677074,1677512..1678236))
location: region:1677013-1678236:-1
so has part: feature:1677512-1678236:-1:exon
so has part: feature:1677013-1677074:-1:exon

position:1677013:-1
position: 1677013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1677512-1678236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1677013-1677074:-1:exon

position:1677074:-1
position: 1677074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989743
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989743
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1.1-like
translation: MTDIVRAKRIQGKNKPPKMPKKASVSKLILQAVAATKERRGLSLVSVKKMLSGNGYDVAKNNSRINHAVRTLVNNGSLVNVSGMGASGSFKVNKEQKDEVQQVARKELVSGAAVSKQPRGKRATKRPAPAKKPKKKWAYRRTMKDGARGKMAKDGRKLNNAPGRKAARIGAKGKRQRAKPKKPTRPPKARKPLAETSDSVKENQAGSEQQEST
SIO_010081: LOC116989743
subclass of: SO_0000673
so part of: LOC116989743
location: complement(1677518..1678159)
location: region:1677518-1678159:-1
so has part: feature:1677518-1678159:-1:exon

XP_032903228.1
type: Protein
SIO_000068: ncbiprotein

position:1677518:-1
position: 1677518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678159:-1
position: 1678159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1677518-1678159:-1:exon

LOC116989743
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989743
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1.1-like
translation: MTDIVRAKRIQGKNKPPKMPKKASVSKLILQAVAATKERRGLSLVSVKKMLSGNGYDVAKNNSRINHAVRTLVNNGSLVNVSGMGASGSFKVNKEQKDEVQQVARKELVSGAAVSKQPRGKRATKRPAPAKKPKKKWAYRRTMKDGARGKMAKDGRKLNNAPGRKAARIGAKGKRQRAKPKKPTRPPKARKPLAETSDSVKENQAGSEQQEST
SIO_010081: LOC116989743
subclass of: SO_0000673
so part of: LOC116989743
location: complement(1677518..1678159)
location: region:1677518-1678159:-1
so has part: feature:1677518-1678159:-1:exon

XP_032903229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1677518-1678159:-1:exon

LOC116989749
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989749
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1698652..1699008)
location: region:1698652-1699008:-1
so has part: feature:1698652-1699008:-1:exon
subclass of: SO_0000010

116989749
type: Gene
SIO_000068: ncbigene

position:1698652:-1
position: 1698652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1699008:-1
position: 1699008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1698652-1699008:-1:exon

LOC116989749
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989749
product: histone H4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047344.1
SIO_010081: LOC116989749
subclass of: SO_0000673
so part of: LOC116989749
location: complement(1698652..1699008)
location: region:1698652-1699008:-1
so has part: feature:1698652-1699008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1698652-1699008:-1:exon

LOC116989749
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989749
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H4-like
translation: MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEEVRGVLKVFLENVIRDSVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
SIO_010081: LOC116989749
subclass of: SO_0000673
so part of: LOC116989749
location: complement(1698697..1699008)
location: region:1698697-1699008:-1
so has part: feature:1698697-1699008:-1:exon

XP_032903235.1
type: Protein
SIO_000068: ncbiprotein

position:1698697:-1
position: 1698697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1698697-1699008:-1:exon

LOC116989677
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1707125..1707460
location: region:1707125-1707460:1
so has part: feature:1707125-1707460:1:exon
subclass of: SO_0000010

116989677
type: Gene
SIO_000068: ncbigene

position:1707125:1
position: 1707125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1707460:1
position: 1707460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1707125-1707460:1:exon

LOC116989677
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989677
product: histone H4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047289.1
SIO_010081: LOC116989677
subclass of: SO_0000673
so part of: LOC116989677
location: 1707125..1707460
location: region:1707125-1707460:1
so has part: feature:1707125-1707460:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1707125-1707460:1:exon

LOC116989677
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H4-like
translation: MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEEVRGVLKVFLENVIRDSVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
SIO_010081: LOC116989677
subclass of: SO_0000673
so part of: LOC116989677
location: 1707149..1707460
location: region:1707149-1707460:1
so has part: feature:1707149-1707460:1:exon

XP_032903180.1
type: Protein
SIO_000068: ncbiprotein

position:1707149:1
position: 1707149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1707149-1707460:1:exon

LOC116989753
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1715722..1716227)
location: region:1715722-1716227:-1
so has part: feature:1715722-1716227:-1:exon
subclass of: SO_0000010

116989753
type: Gene
SIO_000068: ncbigene

position:1715722:-1
position: 1715722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1716227:-1
position: 1716227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1715722-1716227:-1:exon

LOC116989753
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989753
product: histone H2B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047350.1
SIO_010081: LOC116989753
subclass of: SO_0000673
so part of: LOC116989753
location: complement(1715722..1716227)
location: region:1715722-1716227:-1
so has part: feature:1715722-1716227:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1715722-1716227:-1:exon

LOC116989753
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2B-like
translation: MPEQPKTAPKKGAKKTLPKPVGKKRKKSRKQSYSIYIYKVMKQVHPDTGISSKAMGIMSSFVNDIFERIAGEASRLAHYNKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTNSK
SIO_010081: LOC116989753
subclass of: SO_0000673
so part of: LOC116989753
location: complement(1715862..1716227)
location: region:1715862-1716227:-1
so has part: feature:1715862-1716227:-1:exon

XP_032903241.1
type: Protein
SIO_000068: ncbiprotein

position:1715862:-1
position: 1715862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1715862-1716227:-1:exon

LOC116989752
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1735724..1736144
location: region:1735724-1736144:1
so has part: feature:1735724-1736144:1:exon
subclass of: SO_0000010

116989752
type: Gene
SIO_000068: ncbigene

position:1735724:1
position: 1735724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1736144:1
position: 1736144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1735724-1736144:1:exon

LOC116989752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989752
product: histone H3.1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047349.1
SIO_010081: LOC116989752
subclass of: SO_0000673
so part of: LOC116989752
location: 1735724..1736144
location: region:1735724-1736144:1
so has part: feature:1735724-1736144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1735724-1736144:1:exon

LOC116989752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3.1
translation: MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLAREIAQDFKTDLRFQSSAIMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
SIO_010081: LOC116989752
subclass of: SO_0000673
so part of: LOC116989752
location: 1735724..1736134
location: region:1735724-1736134:1
so has part: feature:1735724-1736134:1:exon

XP_032903240.1
type: Protein
SIO_000068: ncbiprotein

position:1736134:1
position: 1736134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1735724-1736134:1:exon

LOC116989710
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1737792..1738103)
location: region:1737792-1738103:-1
so has part: feature:1737792-1738103:-1:exon
subclass of: SO_0000010

116989710
type: Gene
SIO_000068: ncbigene

position:1737792:-1
position: 1737792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1738103:-1
position: 1738103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1737792-1738103:-1:exon

LOC116989710
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989710
product: histone H4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins
transcript id: XM_033047307.1
SIO_010081: LOC116989710
subclass of: SO_0000673
so part of: LOC116989710
location: complement(1737792..1738103)
location: region:1737792-1738103:-1
so has part: feature:1737792-1738103:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1737792-1738103:-1:exon

LOC116989710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H4-like
translation: MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEEVRGVLKVFLENVIRDSVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
SIO_010081: LOC116989710
subclass of: SO_0000673
so part of: LOC116989710
location: complement(1737792..1738103)
location: region:1737792-1738103:-1
so has part: feature:1737792-1738103:-1:exon

XP_032903198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1737792-1738103:-1:exon

LOC116989711
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1745058..1745447
location: region:1745058-1745447:1
so has part: feature:1745058-1745447:1:exon
subclass of: SO_0000010

116989711
type: Gene
SIO_000068: ncbigene

position:1745058:1
position: 1745058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1745447:1
position: 1745447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1745058-1745447:1:exon

LOC116989711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989711
product: histone H2A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 176 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047308.1
SIO_010081: LOC116989711
subclass of: SO_0000673
so part of: LOC116989711
location: 1745058..1745447
location: region:1745058-1745447:1
so has part: feature:1745058-1745447:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1745058-1745447:1:exon

LOC116989711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A-like
translation: MSGRGKTGGKVRAKTKTRSSRAGLQFPVGRIHRLLRKGHYAERIGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGHQSKVYV
SIO_010081: LOC116989711
subclass of: SO_0000673
so part of: LOC116989711
location: 1745058..1745447
location: region:1745058-1745447:1
so has part: feature:1745058-1745447:1:exon

XP_032903199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1745058-1745447:1:exon

LOC116989755
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1762018..1773325
location: region:1762018-1773325:1
so has part: feature:1762018-1773325:1:exon
subclass of: SO_0000011

116989755
type: Gene
SIO_000068: ncbigene

position:1762018:1
position: 1762018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1773325:1
position: 1773325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1762018-1773325:1:exon

LOC116989755
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989755
product: uncharacterized LOC116989755
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416310.1
SIO_010081: LOC116989755
subclass of: SO_0000673
so part of: LOC116989755
location: join(1762018..1762226,1767088..1767092,1768933..1768940,1773315..1773325)
location: region:1762018-1773325:1
so has part: feature:1762018-1762226:1:exon
so has part: feature:1767088-1767092:1:exon
so has part: feature:1768933-1768940:1:exon
so has part: feature:1773315-1773325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1762018-1762226:1:exon

position:1762226:1
position: 1762226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1767088-1767092:1:exon

position:1767088:1
position: 1767088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1767092:1
position: 1767092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1768933-1768940:1:exon

position:1768933:1
position: 1768933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1768940:1
position: 1768940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1773315-1773325:1:exon

position:1773315:1
position: 1773315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989766
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989766
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1775645..1775840)
location: region:1775645-1775840:-1
so has part: feature:1775645-1775840:-1:exon
subclass of: SO_0000623

116989766
type: Gene
SIO_000068: ncbigene

position:1775645:-1
position: 1775645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1775840:-1
position: 1775840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1775645-1775840:-1:exon

LOC116989766
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snRNA
gene: LOC116989766
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004416315.1
SIO_010081: LOC116989766
subclass of: SO_0000673
so part of: LOC116989766
location: complement(1775645..1775840)
location: region:1775645-1775840:-1
so has part: feature:1775645-1775840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1775645-1775840:-1:exon

LOC116989712
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989712
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1786657..1787046)
location: region:1786657-1787046:-1
so has part: feature:1786657-1787046:-1:exon
subclass of: SO_0000010

116989712
type: Gene
SIO_000068: ncbigene

position:1786657:-1
position: 1786657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1787046:-1
position: 1787046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1786657-1787046:-1:exon

LOC116989712
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989712
product: histone H2A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 161 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047309.1
SIO_010081: LOC116989712
subclass of: SO_0000673
so part of: LOC116989712
location: complement(1786657..1787046)
location: region:1786657-1787046:-1
so has part: feature:1786657-1787046:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1786657-1787046:-1:exon

LOC116989712
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989712
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A-like
translation: MSGRGKTGGKVRAKTKTRSSRAGLQFPVGRIHRLLRKGHYAERIGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGHQSKVYV
SIO_010081: LOC116989712
subclass of: SO_0000673
so part of: LOC116989712
location: complement(1786657..1787046)
location: region:1786657-1787046:-1
so has part: feature:1786657-1787046:-1:exon

XP_032903200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1786657-1787046:-1:exon

LOC116989713
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1818249..1818638)
location: region:1818249-1818638:-1
so has part: feature:1818249-1818638:-1:exon
subclass of: SO_0000010

116989713
type: Gene
SIO_000068: ncbigene

position:1818249:-1
position: 1818249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1818638:-1
position: 1818638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1818249-1818638:-1:exon

LOC116989713
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989713
product: histone H2A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 183 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047310.1
SIO_010081: LOC116989713
subclass of: SO_0000673
so part of: LOC116989713
location: complement(1818249..1818638)
location: region:1818249-1818638:-1
so has part: feature:1818249-1818638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1818249-1818638:-1:exon

LOC116989713
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A-like
translation: MSGRGKTGGKVRAKTKTRSSRAGLQFPVGRIHRLLRKGHYAERIGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGHQSKVYV
SIO_010081: LOC116989713
subclass of: SO_0000673
so part of: LOC116989713
location: complement(1818249..1818638)
location: region:1818249-1818638:-1
so has part: feature:1818249-1818638:-1:exon

XP_032903201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1818249-1818638:-1:exon

LOC116989754
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989754
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1843960..1844398)
location: region:1843960-1844398:-1
so has part: feature:1843960-1844398:-1:exon
subclass of: SO_0000010

116989754
type: Gene
SIO_000068: ncbigene

position:1843960:-1
position: 1843960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1844398:-1
position: 1844398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1843960-1844398:-1:exon

LOC116989754
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989754
product: late histone H2B.L4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047351.1
SIO_010081: LOC116989754
subclass of: SO_0000673
so part of: LOC116989754
location: complement(1843960..1844398)
location: region:1843960-1844398:-1
so has part: feature:1843960-1844398:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1843960-1844398:-1:exon

LOC116989754
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989754
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: late histone H2B.L4-like
translation: MLEQQKAAPKKGAKKTLPKPVGKKRKKSRKQSYSSYIYKVKKQVHPDTGISSKAMDIMSSFVNDIFERITGEASRLAYHNKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
SIO_010081: LOC116989754
subclass of: SO_0000673
so part of: LOC116989754
location: complement(1844016..1844381)
location: region:1844016-1844381:-1
so has part: feature:1844016-1844381:-1:exon

XP_032903242.1
type: Protein
SIO_000068: ncbiprotein

position:1844016:-1
position: 1844016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1844381:-1
position: 1844381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1844016-1844381:-1:exon

LOC116989751
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1858490..1858900
location: region:1858490-1858900:1
so has part: feature:1858490-1858900:1:exon
subclass of: SO_0000010

116989751
type: Gene
SIO_000068: ncbigene

position:1858490:1
position: 1858490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1858900:1
position: 1858900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1858490-1858900:1:exon

LOC116989751
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989751
product: histone H3.1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047346.1
SIO_010081: LOC116989751
subclass of: SO_0000673
so part of: LOC116989751
location: 1858490..1858900
location: region:1858490-1858900:1
so has part: feature:1858490-1858900:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1858490-1858900:1:exon

LOC116989751
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3.1-like
translation: MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIHLARRIRGERA
SIO_010081: LOC116989751
subclass of: SO_0000673
so part of: LOC116989751
location: 1858490..1858900
location: region:1858490-1858900:1
so has part: feature:1858490-1858900:1:exon

XP_032903237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1858490-1858900:1:exon

LOC116989678
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989678
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<1861340..1871352)
location: region:1861340-1871352:-1
so has part: feature:1861340-1871352:-1:exon
subclass of: SO_0000010

116989678
type: Gene
SIO_000068: ncbigene

position:1861340:-1
position: 1861340
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:1871352:-1
position: 1871352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1861340-1871352:-1:exon

LOC116989678
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989678
product: histone H2AX-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 126 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047290.1
SIO_010081: LOC116989678
subclass of: SO_0000673
so part of: LOC116989678
location: complement(join(<1861340..1861348,1870975..1871352))
location: region:1861340-1871352:-1
so has part: feature:1870975-1871352:-1:exon
so has part: feature:1861340-1861348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1870975-1871352:-1:exon

position:1870975:-1
position: 1870975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1861340-1861348:-1:exon

position:1861348:-1
position: 1861348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989678
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989678
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2AX-like
translation: MSGRGKTGGKVRAKTKTRSSRAGLQFPVGRIHRLLRKGHYAERIGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGQQSKGSK
SIO_010081: LOC116989678
subclass of: SO_0000673
so part of: LOC116989678
location: complement(join(<1861340..1861348,1870975..1871352))
location: region:1861340-1871352:-1
so has part: feature:1870975-1871352:-1:exon
so has part: feature:1861340-1861348:-1:exon

XP_032903181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1870975-1871352:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1861340-1861348:-1:exon

LOC116989679
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1878869..1880509
location: region:1878869-1880509:1
so has part: feature:1878869-1880509:1:exon
subclass of: SO_0000011

116989679
type: Gene
SIO_000068: ncbigene

position:1878869:1
position: 1878869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1880509:1
position: 1880509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1878869-1880509:1:exon

LOC116989679
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989679
product: uncharacterized LOC116989679
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416287.1
SIO_010081: LOC116989679
subclass of: SO_0000673
so part of: LOC116989679
location: join(1878869..1879069,1879662..1879841,1880403..1880509)
location: region:1878869-1880509:1
so has part: feature:1878869-1879069:1:exon
so has part: feature:1879662-1879841:1:exon
so has part: feature:1880403-1880509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1878869-1879069:1:exon

position:1879069:1
position: 1879069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1879662-1879841:1:exon

position:1879662:1
position: 1879662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1879841:1
position: 1879841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1880403-1880509:1:exon

position:1880403:1
position: 1880403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989680
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1897684..1898122
location: region:1897684-1898122:1
so has part: feature:1897684-1898122:1:exon
subclass of: SO_0000010

116989680
type: Gene
SIO_000068: ncbigene

position:1897684:1
position: 1897684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1898122:1
position: 1898122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1897684-1898122:1:exon

LOC116989680
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989680
product: late histone H2B.L4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 52 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033047292.1
SIO_010081: LOC116989680
subclass of: SO_0000673
so part of: LOC116989680
location: 1897684..1898122
location: region:1897684-1898122:1
so has part: feature:1897684-1898122:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1897684-1898122:1:exon

LOC116989680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: late histone H2B.L4-like
translation: MLEQQKAAPKKGAKKTLPKPVGKKRKKSRKQSYSSYIYKVKKQVHPDTGISSKAMDIMSSFVNDIFERITGEASRLAYHNKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
SIO_010081: LOC116989680
subclass of: SO_0000673
so part of: LOC116989680
location: 1897701..1898066
location: region:1897701-1898066:1
so has part: feature:1897701-1898066:1:exon

XP_032903183.1
type: Protein
SIO_000068: ncbiprotein

position:1897701:1
position: 1897701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1898066:1
position: 1898066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1897701-1898066:1:exon

LOC116989715
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1908549..1942425)
location: region:1908549-1942425:-1
so has part: feature:1908549-1942425:-1:exon
subclass of: SO_0000010

116989715
type: Gene
SIO_000068: ncbigene

position:1908549:-1
position: 1908549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1942425:-1
position: 1942425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1908549-1942425:-1:exon

LOC116989715
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989715
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_033047312.1
SIO_010081: LOC116989715
subclass of: SO_0000673
so part of: LOC116989715
location: complement(join(1908549..1908638,1933196..1934076,1942287..1942425))
location: region:1908549-1942425:-1
so has part: feature:1942287-1942425:-1:exon
so has part: feature:1933196-1934076:-1:exon
so has part: feature:1908549-1908638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1942287-1942425:-1:exon

position:1942287:-1
position: 1942287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1933196-1934076:-1:exon

position:1933196:-1
position: 1933196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1934076:-1
position: 1934076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1908549-1908638:-1:exon

position:1908638:-1
position: 1908638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MAKNIFWALEYVYADYDWLTVDYRIWYALFVIQPVYYPLLCVVAVPVNTVTIVILSRGKCGLSKGVTRYLEAMATADLLVVIFDMIMKQLPMGYREQFSFVNSIHVCNIHAVVVAAVTDCSVWFTVAFTFDRFVAISCQKLRTKYCTERTAAVVLGTITVLSSLKNIFWYFMLRGEYHLDYVPWFCRERAGVLRSSVWAAIEFLHYLVTPGLPFALILLLNVLTTKYVLVAGRTRKRLRDPSLRESARDPEMESRRKSLILLLVISGNFILLWSVYMVYNIWGRIYDLRIGSSFPPNTLQELGFMLQLLSCCTNTALYAVTQTKFRQQLKDLVKYPFTLTWEHCNLHVPQAQCANNAYMGTDDLFLHQP
SIO_010081: LOC116989715
subclass of: SO_0000673
so part of: LOC116989715
location: complement(join(1908549..1908638,1933196..1934076,1942287..1942425))
location: region:1908549-1942425:-1
so has part: feature:1942287-1942425:-1:exon
so has part: feature:1933196-1934076:-1:exon
so has part: feature:1908549-1908638:-1:exon

XP_032903203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1942287-1942425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1933196-1934076:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1908549-1908638:-1:exon

LOC116989756
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1991762..2009495)
location: region:1991762-2009495:-1
so has part: feature:1991762-2009495:-1:exon
subclass of: SO_0000011

116989756
type: Gene
SIO_000068: ncbigene

position:1991762:-1
position: 1991762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2009495:-1
position: 2009495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1991762-2009495:-1:exon

LOC116989756
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989756
product: uncharacterized LOC116989756
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004416311.1
SIO_010081: LOC116989756
subclass of: SO_0000673
so part of: LOC116989756
location: complement(join(1991762..1991772,1992954..1992956,2004412..2004415,2009338..2009495))
location: region:1991762-2009495:-1
so has part: feature:2009338-2009495:-1:exon
so has part: feature:2004412-2004415:-1:exon
so has part: feature:1992954-1992956:-1:exon
so has part: feature:1991762-1991772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2009338-2009495:-1:exon

position:2009338:-1
position: 2009338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2004412-2004415:-1:exon

position:2004412:-1
position: 2004412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2004415:-1
position: 2004415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1992954-1992956:-1:exon

position:1992954:-1
position: 1992954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1992956:-1
position: 1992956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1991762-1991772:-1:exon

position:1991772:-1
position: 1991772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989246
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989246
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2070954..2106870)
location: region:2070954-2106870:-1
so has part: feature:2070954-2106870:-1:exon
subclass of: SO_0000010

116989246
type: Gene
SIO_000068: ncbigene

position:2070954:-1
position: 2070954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2106870:-1
position: 2106870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2070954-2106870:-1:exon

LOC116989246
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989246
product: Krueppel-like factor 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033046440.1
SIO_010081: LOC116989246
subclass of: SO_0000673
so part of: LOC116989246
location: complement(join(2070954..2076650,2106031..2106870))
location: region:2070954-2106870:-1
so has part: feature:2106031-2106870:-1:exon
so has part: feature:2070954-2076650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2106031-2106870:-1:exon

position:2106031:-1
position: 2106031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2070954-2076650:-1:exon

position:2076650:-1
position: 2076650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989246
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989246
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 9
translation: MSVFACRDYFAAECLMSISSGAVVHRSPLKGETCELTSKEDKEVSDTLKEGGNLLMVASILTGLQKSRPMSSNSESSNSSSGESLESGYTTLSEGPYTTPTLIATNCTSEKRKIKRSDKSSAKKHLCYFAGCDKVYGKSSHLKAHMRTHTGERPFPCTWPQCLKKFARSDELARHYRTHTGEKKFKCPMCEKRFMRSDHLMKHARRHPDFKPTMIVKPNSRSASPPKMLAPTFHSLAPPSIIIPSPNPASPVFSQTEESPVCTKSLV
SIO_010081: LOC116989246
subclass of: SO_0000673
so part of: LOC116989246
location: complement(join(2076298..2076650,2106031..2106481))
location: region:2076298-2106481:-1
so has part: feature:2106031-2106481:-1:exon
so has part: feature:2076298-2076650:-1:exon

XP_032902331.1
type: Protein
SIO_000068: ncbiprotein

position:2076298:-1
position: 2076298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2106481:-1
position: 2106481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2106031-2106481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2076298-2076650:-1:exon

LOC116989247
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989247
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2106384..2116415
location: region:2106384-2116415:1
so has part: feature:2106384-2116415:1:exon
subclass of: SO_0000011

116989247
type: Gene
SIO_000068: ncbigene

position:2106384:1
position: 2106384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2116415:1
position: 2116415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2106384-2116415:1:exon

LOC116989247
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989247
product: uncharacterized LOC116989247
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004416195.1
SIO_010081: LOC116989247
subclass of: SO_0000673
so part of: LOC116989247
location: join(2106384..2106513,2107613..2107694,2116002..2116415)
location: region:2106384-2116415:1
so has part: feature:2106384-2106513:1:exon
so has part: feature:2107613-2107694:1:exon
so has part: feature:2116002-2116415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2106384-2106513:1:exon

position:2106513:1
position: 2106513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2107613-2107694:1:exon

position:2107613:1
position: 2107613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2107694:1
position: 2107694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2116002-2116415:1:exon

position:2116002:1
position: 2116002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989248
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2380829..2460851)
location: region:2380829-2460851:-1
so has part: feature:2380829-2460851:-1:exon
subclass of: SO_0000010

116989248
type: Gene
SIO_000068: ncbigene

position:2380829:-1
position: 2380829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2460851:-1
position: 2460851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2380829-2460851:-1:exon

LOC116989248
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989248
product: alpha/beta hydrolase domain-containing protein 17B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033046441.1
SIO_010081: LOC116989248
subclass of: SO_0000673
so part of: LOC116989248
location: complement(join(2380829..2381440,2394985..2395164,2421432..2421626,2460353..2460851))
location: region:2380829-2460851:-1
so has part: feature:2460353-2460851:-1:exon
so has part: feature:2421432-2421626:-1:exon
so has part: feature:2394985-2395164:-1:exon
so has part: feature:2380829-2381440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2460353-2460851:-1:exon

position:2460353:-1
position: 2460353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2421432-2421626:-1:exon

position:2421432:-1
position: 2421432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2421626:-1
position: 2421626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2394985-2395164:-1:exon

position:2394985:-1
position: 2394985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2395164:-1
position: 2395164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2380829-2381440:-1:exon

position:2381440:-1
position: 2381440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989248
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha/beta hydrolase domain-containing protein 17B-like
translation: MLLCLLIARNGGEGYEELRRERLGRHRVAARFPLSPGRLRPSTSGGGSATARIARPTPGSPPVPRPGPAMNGLSLSELCCLFCCPPCPSRIAAKLAFLPPEPTYVAVADETGSCWTLRFTERAEWQYGQRELDCTDIFLTRTSRGNRIACMFIRCSPTARFTLLFSHGNAVDLGQMSSFYIGLGTRINCNIFSYDYSGYGVSNGKPSEKNLYADIDAAWQALRTRYGISPENIILYGQSIGTVPTVDLASRYECAAVILHSPLTSGMRVAFPDTKKTYCFDAFPNIDKISKISSPVLIIHGTEDEVIDFSHGLALYERCIKAVEPLWVEGAGHNDIELYSQYLERLRKFISYELVNVQRN
SIO_010081: LOC116989248
subclass of: SO_0000673
so part of: LOC116989248
location: complement(join(2381212..2381440,2394985..2395164,2421432..2421626,2460353..2460831))
location: region:2381212-2460831:-1
so has part: feature:2460353-2460831:-1:exon
so has part: feature:2421432-2421626:-1:exon
so has part: feature:2394985-2395164:-1:exon
so has part: feature:2381212-2381440:-1:exon

XP_032902332.1
type: Protein
SIO_000068: ncbiprotein

position:2381212:-1
position: 2381212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2460831:-1
position: 2460831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2460353-2460831:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2421432-2421626:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2394985-2395164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2381212-2381440:-1:exon

LOC116989249
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2394696..2413903
location: region:2394696-2413903:1
so has part: feature:2394696-2413903:1:exon
subclass of: SO_0000011

116989249
type: Gene
SIO_000068: ncbigene

position:2394696:1
position: 2394696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2413903:1
position: 2413903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2394696-2413903:1:exon

LOC116989249
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989249
product: uncharacterized LOC116989249
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004416196.1
SIO_010081: LOC116989249
subclass of: SO_0000673
so part of: LOC116989249
location: join(2394696..2394707,2413499..2413504,2413757..2413903)
location: region:2394696-2413903:1
so has part: feature:2394696-2394707:1:exon
so has part: feature:2413499-2413504:1:exon
so has part: feature:2413757-2413903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2394696-2394707:1:exon

position:2394707:1
position: 2394707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2413499-2413504:1:exon

position:2413499:1
position: 2413499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2413504:1
position: 2413504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2413757-2413903:1:exon

position:2413757:1
position: 2413757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989250
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2612805..2754344)
location: region:2612805-2754344:-1
so has part: feature:2612805-2754344:-1:exon
subclass of: SO_0000010

116989250
type: Gene
SIO_000068: ncbigene

position:2612805:-1
position: 2612805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2754344:-1
position: 2754344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2612805-2754344:-1:exon

LOC116989250
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989250
product: endochitinase 2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033046444.1
SIO_010081: LOC116989250
subclass of: SO_0000673
so part of: LOC116989250
location: complement(join(2612805..2612894,2618609..2618694,2624369..2624464,2712745..2712840,2719069..2719164,2729441..2729536,2733905..2734000,2754156..2754344))
location: region:2612805-2754344:-1
so has part: feature:2754156-2754344:-1:exon
so has part: feature:2733905-2734000:-1:exon
so has part: feature:2729441-2729536:-1:exon
so has part: feature:2719069-2719164:-1:exon
so has part: feature:2712745-2712840:-1:exon
so has part: feature:2624369-2624464:-1:exon
so has part: feature:2618609-2618694:-1:exon
so has part: feature:2612805-2612894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2754156-2754344:-1:exon

position:2754156:-1
position: 2754156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2733905-2734000:-1:exon

position:2733905:-1
position: 2733905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2734000:-1
position: 2734000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2729441-2729536:-1:exon

position:2729441:-1
position: 2729441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2729536:-1
position: 2729536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2719069-2719164:-1:exon

position:2719069:-1
position: 2719069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2719164:-1
position: 2719164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2712745-2712840:-1:exon

position:2712745:-1
position: 2712745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2712840:-1
position: 2712840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2624369-2624464:-1:exon

position:2624369:-1
position: 2624369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2624464:-1
position: 2624464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2618609-2618694:-1:exon

position:2618609:-1
position: 2618609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2618694:-1
position: 2618694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2612805-2612894:-1:exon

position:2612894:-1
position: 2612894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989250
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989250
product: endochitinase 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033046443.1
SIO_010081: LOC116989250
subclass of: SO_0000673
so part of: LOC116989250
location: complement(join(2612805..2612894,2618609..2618694,2624369..2624464,2712745..2712840,2729441..2729536,2733905..2734000,2751756..2751851,2754156..2754344))
location: region:2612805-2754344:-1
so has part: feature:2754156-2754344:-1:exon
so has part: feature:2751756-2751851:-1:exon
so has part: feature:2733905-2734000:-1:exon
so has part: feature:2729441-2729536:-1:exon
so has part: feature:2712745-2712840:-1:exon
so has part: feature:2624369-2624464:-1:exon
so has part: feature:2618609-2618694:-1:exon
so has part: feature:2612805-2612894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2754156-2754344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2751756-2751851:-1:exon

position:2751756:-1
position: 2751756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2751851:-1
position: 2751851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2733905-2734000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2729441-2729536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2712745-2712840:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2624369-2624464:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2618609-2618694:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2612805-2612894:-1:exon

LOC116989250
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989250
product: endochitinase 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033046442.1
SIO_010081: LOC116989250
subclass of: SO_0000673
so part of: LOC116989250
location: complement(join(2612805..2612894,2618609..2618694,2624369..2624464,2712745..2712840,2719069..2719164,2729441..2729536,2733905..2734000,2751756..2751851,2754156..2754344))
location: region:2612805-2754344:-1
so has part: feature:2754156-2754344:-1:exon
so has part: feature:2751756-2751851:-1:exon
so has part: feature:2733905-2734000:-1:exon
so has part: feature:2729441-2729536:-1:exon
so has part: feature:2719069-2719164:-1:exon
so has part: feature:2712745-2712840:-1:exon
so has part: feature:2624369-2624464:-1:exon
so has part: feature:2618609-2618694:-1:exon
so has part: feature:2612805-2612894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2754156-2754344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2751756-2751851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2733905-2734000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2729441-2729536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2719069-2719164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2712745-2712840:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2624369-2624464:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2618609-2618694:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2612805-2612894:-1:exon

LOC116989250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-5AC-like isoform X3
translation: MTCRGVATFPCLCSFIPDLQTSTREQGEGSLTGESTQEPSSVPAGDTSSDLQTSTREQGEGSLTGESTQEPSSVPAGDTASDLQTSTRRQGEGSLTGESTQEPSSVPAGDTSSDVQTSTREQGEGSLTGESTQEPFSVPAGDTASDLQTSTREQGEGSLTGESTQEPSSVPAGDTPSDLQTSTREQSEGSLTGESTQEPSPVPAGDRASDDDYQMIEIKVTSDGKMTVEEVKEALRAKLREMFDDPDPQIELVEEEEDSQDD
SIO_010081: LOC116989250
subclass of: SO_0000673
so part of: LOC116989250
location: complement(join(2612820..2612894,2618609..2618694,2624369..2624464,2712745..2712840,2719069..2719164,2729441..2729536,2733905..2734000,2754156..2754303))
location: region:2612820-2754303:-1
so has part: feature:2754156-2754303:-1:exon
so has part: feature:2733905-2734000:-1:exon
so has part: feature:2729441-2729536:-1:exon
so has part: feature:2719069-2719164:-1:exon
so has part: feature:2712745-2712840:-1:exon
so has part: feature:2624369-2624464:-1:exon
so has part: feature:2618609-2618694:-1:exon
so has part: feature:2612820-2612894:-1:exon

XP_032902335.1
type: Protein
SIO_000068: ncbiprotein

position:2612820:-1
position: 2612820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2754303:-1
position: 2754303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2754156-2754303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2733905-2734000:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2729441-2729536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2719069-2719164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2712745-2712840:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2624369-2624464:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2618609-2618694:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2612820-2612894:-1:exon

LOC116989250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-5AC-like isoform X2
translation: MTCRGVATFPCLCSFIPDLQTSTREQGEGSLTGESTQEPSSVPAGDTSSDLQTSTTEQGEGSLTGESTQEPSSVPVGDTSSDLQTSTREQGEGSLTGESTQEPSSVPAGDTASDLQTSTRRQGEGSLTGESTQEPSSVPAGDTSSDLQTSTREQGEGSLTGESTQEPSSVPAGDTPSDLQTSTREQSEGSLTGESTQEPSPVPAGDRASDDDYQMIEIKVTSDGKMTVEEVKEALRAKLREMFDDPDPQIELVEEEEDSQDD
SIO_010081: LOC116989250
subclass of: SO_0000673
so part of: LOC116989250
location: complement(join(2612820..2612894,2618609..2618694,2624369..2624464,2712745..2712840,2729441..2729536,2733905..2734000,2751756..2751851,2754156..2754303))
location: region:2612820-2754303:-1
so has part: feature:2754156-2754303:-1:exon
so has part: feature:2751756-2751851:-1:exon
so has part: feature:2733905-2734000:-1:exon
so has part: feature:2729441-2729536:-1:exon
so has part: feature:2712745-2712840:-1:exon
so has part: feature:2624369-2624464:-1:exon
so has part: feature:2618609-2618694:-1:exon
so has part: feature:2612820-2612894:-1:exon

XP_032902334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2754156-2754303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2751756-2751851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2733905-2734000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2729441-2729536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2712745-2712840:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2624369-2624464:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2618609-2618694:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2612820-2612894:-1:exon

LOC116989250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endochitinase 2-like isoform X1
translation: MTCRGVATFPCLCSFIPDLQTSTREQGEGSLTGESTQEPSSVPAGDTSSDLQTSTTEQGEGSLTGESTQEPSSVPVGDTSSDLQTSTREQGEGSLTGESTQEPSSVPAGDTASDLQTSTRRQGEGSLTGESTQEPSSVPAGDTSSDVQTSTREQGEGSLTGESTQEPFSVPAGDTASDLQTSTREQGEGSLTGESTQEPSSVPAGDTPSDLQTSTREQSEGSLTGESTQEPSPVPAGDRASDDDYQMIEIKVTSDGKMTVEEVKEALRAKLREMFDDPDPQIELVEEEEDSQDD
SIO_010081: LOC116989250
subclass of: SO_0000673
so part of: LOC116989250
location: complement(join(2612820..2612894,2618609..2618694,2624369..2624464,2712745..2712840,2719069..2719164,2729441..2729536,2733905..2734000,2751756..2751851,2754156..2754303))
location: region:2612820-2754303:-1
so has part: feature:2754156-2754303:-1:exon
so has part: feature:2751756-2751851:-1:exon
so has part: feature:2733905-2734000:-1:exon
so has part: feature:2729441-2729536:-1:exon
so has part: feature:2719069-2719164:-1:exon
so has part: feature:2712745-2712840:-1:exon
so has part: feature:2624369-2624464:-1:exon
so has part: feature:2618609-2618694:-1:exon
so has part: feature:2612820-2612894:-1:exon

XP_032902333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2754156-2754303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2751756-2751851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2733905-2734000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2729441-2729536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2719069-2719164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2712745-2712840:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2624369-2624464:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2618609-2618694:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2612820-2612894:-1:exon

LOC116989681
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3112690..3126362)
location: region:3112690-3126362:-1
so has part: feature:3112690-3126362:-1:exon
subclass of: SO_0000011

116989681
type: Gene
SIO_000068: ncbigene

position:3112690:-1
position: 3112690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3126362:-1
position: 3126362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3112690-3126362:-1:exon

LOC116989681
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989681
product: uncharacterized LOC116989681
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416288.1
SIO_010081: LOC116989681
subclass of: SO_0000673
so part of: LOC116989681
location: complement(join(3112690..3112700,3125868..3125871,3126234..3126362))
location: region:3112690-3126362:-1
so has part: feature:3126234-3126362:-1:exon
so has part: feature:3125868-3125871:-1:exon
so has part: feature:3112690-3112700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3126234-3126362:-1:exon

position:3126234:-1
position: 3126234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3125868-3125871:-1:exon

position:3125868:-1
position: 3125868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3125871:-1
position: 3125871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3112690-3112700:-1:exon

position:3112700:-1
position: 3112700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989251
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989251
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3127049..3205440
location: region:3127049-3205440:1
so has part: feature:3127049-3205440:1:exon
subclass of: SO_0000010

116989251
type: Gene
SIO_000068: ncbigene

position:3127049:1
position: 3127049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3205440:1
position: 3205440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3127049-3205440:1:exon

LOC116989251
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989251
product: nuclear receptor ROR-beta-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033046445.1
SIO_010081: LOC116989251
subclass of: SO_0000673
so part of: LOC116989251
location: join(3127049..3127194,3171173..3171258,3178720..3178861,3182385..3182789,3183750..3183871,3189614..3189746,3195858..3195965,3197027..3197137,3200439..3200551,3201411..3205440)
location: region:3127049-3205440:1
so has part: feature:3127049-3127194:1:exon
so has part: feature:3171173-3171258:1:exon
so has part: feature:3178720-3178861:1:exon
so has part: feature:3182385-3182789:1:exon
so has part: feature:3183750-3183871:1:exon
so has part: feature:3189614-3189746:1:exon
so has part: feature:3195858-3195965:1:exon
so has part: feature:3197027-3197137:1:exon
so has part: feature:3200439-3200551:1:exon
so has part: feature:3201411-3205440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3127049-3127194:1:exon

position:3127194:1
position: 3127194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3171173-3171258:1:exon

position:3171173:1
position: 3171173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3171258:1
position: 3171258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3178720-3178861:1:exon

position:3178720:1
position: 3178720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3178861:1
position: 3178861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3182385-3182789:1:exon

position:3182385:1
position: 3182385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3182789:1
position: 3182789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3183750-3183871:1:exon

position:3183750:1
position: 3183750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3183871:1
position: 3183871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3189614-3189746:1:exon

position:3189614:1
position: 3189614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3189746:1
position: 3189746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3195858-3195965:1:exon

position:3195858:1
position: 3195858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3195965:1
position: 3195965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3197027-3197137:1:exon

position:3197027:1
position: 3197027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3197137:1
position: 3197137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3200439-3200551:1:exon

position:3200439:1
position: 3200439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3200551:1
position: 3200551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3201411-3205440:1:exon

position:3201411:1
position: 3201411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989251
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989251
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor ROR-beta-like
translation: MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAAYSCPRSRNCLIDRTNRNRCQHCRLQKCLTLGMSRDAVKFGRMSKKQRDSLYAEVQKHQQHQEQMAMKEEADGLVRGYPDSGLGDLDDISSTFSDGLLLDFPLTPDGGNSFYNFDTSASAERSPDQSAMDVNDIKYIKQEPIYEIMLEPSLFPYPSPENSQLAIEVSMAEIDRISQNVVESHLETCQYTVEELKQLAWQLYTQEEIRNFQNKSCEAMWQQCAIQVTDAIQYVVEFAKRISGFMDLCQNDQIILLKAGCLEVLLVRMCRAYNPMNNTLFFEGKYGSTQIFKSLGCDDFISVVFEFAKGLCCLHLTEEEIALFTAGILLSPDRPWLTEARKVKKLQDKIYEALQHVIQKNQRDDDKLSKLISKSSVLKSVCNLHVDKLQLFKLLHPQTVHNFPPLYKEVFSTEMQYPDSTNS
SIO_010081: LOC116989251
subclass of: SO_0000673
so part of: LOC116989251
location: join(3127188..3127194,3171173..3171258,3178720..3178861,3182385..3182789,3183750..3183871,3189614..3189746,3195858..3195965,3197027..3197137,3200439..3200551,3201411..3201572)
location: region:3127188-3201572:1
so has part: feature:3127188-3127194:1:exon
so has part: feature:3171173-3171258:1:exon
so has part: feature:3178720-3178861:1:exon
so has part: feature:3182385-3182789:1:exon
so has part: feature:3183750-3183871:1:exon
so has part: feature:3189614-3189746:1:exon
so has part: feature:3195858-3195965:1:exon
so has part: feature:3197027-3197137:1:exon
so has part: feature:3200439-3200551:1:exon
so has part: feature:3201411-3201572:1:exon

XP_032902336.1
type: Protein
SIO_000068: ncbiprotein

position:3127188:1
position: 3127188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3201572:1
position: 3201572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3127188-3127194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3171173-3171258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3178720-3178861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3182385-3182789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3183750-3183871:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3189614-3189746:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3195858-3195965:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3197027-3197137:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3200439-3200551:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3201411-3201572:1:exon

LOC116989252
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3139533..3146848
location: region:3139533-3146848:1
so has part: feature:3139533-3146848:1:exon
subclass of: SO_0000011

116989252
type: Gene
SIO_000068: ncbigene

position:3139533:1
position: 3139533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3146848:1
position: 3146848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3139533-3146848:1:exon

LOC116989252
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989252
product: uncharacterized LOC116989252
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004416197.1
SIO_010081: LOC116989252
subclass of: SO_0000673
so part of: LOC116989252
location: join(3139533..3139764,3146488..3146490,3146838..3146848)
location: region:3139533-3146848:1
so has part: feature:3139533-3139764:1:exon
so has part: feature:3146488-3146490:1:exon
so has part: feature:3146838-3146848:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3139533-3139764:1:exon

position:3139764:1
position: 3139764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3146488-3146490:1:exon

position:3146488:1
position: 3146488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3146490:1
position: 3146490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3146838-3146848:1:exon

position:3146838:1
position: 3146838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989254
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989254
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3267981..3316033)
location: region:3267981-3316033:-1
so has part: feature:3267981-3316033:-1:exon
subclass of: SO_0000010

116989254
type: Gene
SIO_000068: ncbigene

position:3267981:-1
position: 3267981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3316033:-1
position: 3316033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3267981-3316033:-1:exon

LOC116989254
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989254
product: hydroxysteroid 11-beta-dehydrogenase 1-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033046446.1
SIO_010081: LOC116989254
subclass of: SO_0000673
so part of: LOC116989254
location: complement(join(3267981..3268243,3272037..3272202,3277602..3277695,3290151..3290242,3292749..3292860,3301095..3301225,3315850..3316033))
location: region:3267981-3316033:-1
so has part: feature:3315850-3316033:-1:exon
so has part: feature:3301095-3301225:-1:exon
so has part: feature:3292749-3292860:-1:exon
so has part: feature:3290151-3290242:-1:exon
so has part: feature:3277602-3277695:-1:exon
so has part: feature:3272037-3272202:-1:exon
so has part: feature:3267981-3268243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3315850-3316033:-1:exon

position:3315850:-1
position: 3315850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3301095-3301225:-1:exon

position:3301095:-1
position: 3301095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3301225:-1
position: 3301225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3292749-3292860:-1:exon

position:3292749:-1
position: 3292749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3292860:-1
position: 3292860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3290151-3290242:-1:exon

position:3290151:-1
position: 3290151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3290242:-1
position: 3290242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3277602-3277695:-1:exon

position:3277602:-1
position: 3277602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3277695:-1
position: 3277695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3272037-3272202:-1:exon

position:3272037:-1
position: 3272037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3272202:-1
position: 3272202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3267981-3268243:-1:exon

position:3268243:-1
position: 3268243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989254
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989254
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroxysteroid 11-beta-dehydrogenase 1-like protein
translation: MARLTKIVILAISVGILAVLWRDTFEPEILSGAHVLLTGASKGIGEQMAYHYAQFGSELVITARNKTLLKQVEEKCLHLGARKVHSISADMSDPKSGNQVVQFALEKLGSLNYLVLNHIGYDPLQMWGGNAEHTSWLMQVNFLSYVQLTAAALPSLIETKGSIIVVSSLCGKIAIPYAASYSASKSALEGFFNSLRHELVIQKREVSVTLCVLGLIDTQTAMEKMRARGLPIVSPHPAAEAALDIIRGGAIRAKEIYSPWWVEGIVRTRDWFTDLKDMFMHRYFRPMDGQ
SIO_010081: LOC116989254
subclass of: SO_0000673
so part of: LOC116989254
location: complement(join(3268048..3268243,3272037..3272202,3277602..3277695,3290151..3290242,3292749..3292860,3301095..3301225,3315850..3315931))
location: region:3268048-3315931:-1
so has part: feature:3315850-3315931:-1:exon
so has part: feature:3301095-3301225:-1:exon
so has part: feature:3292749-3292860:-1:exon
so has part: feature:3290151-3290242:-1:exon
so has part: feature:3277602-3277695:-1:exon
so has part: feature:3272037-3272202:-1:exon
so has part: feature:3268048-3268243:-1:exon

XP_032902337.1
type: Protein
SIO_000068: ncbiprotein

position:3268048:-1
position: 3268048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3315931:-1
position: 3315931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3315850-3315931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3301095-3301225:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3292749-3292860:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3290151-3290242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3277602-3277695:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3272037-3272202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3268048-3268243:-1:exon

micos13
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: micos13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3341445..3360849
location: region:3341445-3360849:1
so has part: feature:3341445-3360849:1:exon
subclass of: SO_0000010

116989255
type: Gene
SIO_000068: ncbigene

position:3341445:1
position: 3341445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3360849:1
position: 3360849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3341445-3360849:1:exon

micos13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: micos13
product: mitochondrial contact site and cristae organizing system subunit 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033046447.1
SIO_010081: micos13
subclass of: SO_0000673
so part of: micos13
location: join(3341445..3341593,3353049..3353205,3357474..3357525,3360628..3360849)
location: region:3341445-3360849:1
so has part: feature:3341445-3341593:1:exon
so has part: feature:3353049-3353205:1:exon
so has part: feature:3357474-3357525:1:exon
so has part: feature:3360628-3360849:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3341445-3341593:1:exon

position:3341593:1
position: 3341593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3353049-3353205:1:exon

position:3353049:1
position: 3353049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3353205:1
position: 3353205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3357474-3357525:1:exon

position:3357474:1
position: 3357474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3357525:1
position: 3357525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3360628-3360849:1:exon

position:3360628:1
position: 3360628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

micos13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: micos13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MICOS complex subunit MIC13
translation: MASRALAAVRIVTKTGIIGGSVYLAYDQGLLGDGEQSCKVLNKVSVAVPEALDQWSKYFEVELPELPKTNVPVAEYWNSGIESIVSFLSNAPTKLNEYTETGWQYIKKMTSSTE
SIO_010081: micos13
subclass of: SO_0000673
so part of: micos13
location: join(3341565..3341593,3353049..3353205,3357474..3357525,3360628..3360734)
location: region:3341565-3360734:1
so has part: feature:3341565-3341593:1:exon
so has part: feature:3353049-3353205:1:exon
so has part: feature:3357474-3357525:1:exon
so has part: feature:3360628-3360734:1:exon

XP_032902338.1
type: Protein
SIO_000068: ncbiprotein

position:3341565:1
position: 3341565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3360734:1
position: 3360734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3341565-3341593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3353049-3353205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3357474-3357525:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3360628-3360734:1:exon

LOC116989256
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3390324..3516799)
location: region:3390324-3516799:-1
so has part: feature:3390324-3516799:-1:exon
subclass of: SO_0000010

116989256
type: Gene
SIO_000068: ncbigene

position:3390324:-1
position: 3390324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3516799:-1
position: 3516799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3390324-3516799:-1:exon

LOC116989256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989256
product: spindlin-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033046449.1
SIO_010081: LOC116989256
subclass of: SO_0000673
so part of: LOC116989256
location: complement(join(3390324..3391582,3400130..3400363,3404262..3404512,3432653..3432700,3516702..3516799))
location: region:3390324-3516799:-1
so has part: feature:3516702-3516799:-1:exon
so has part: feature:3432653-3432700:-1:exon
so has part: feature:3404262-3404512:-1:exon
so has part: feature:3400130-3400363:-1:exon
so has part: feature:3390324-3391582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3516702-3516799:-1:exon

position:3516702:-1
position: 3516702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3432653-3432700:-1:exon

position:3432653:-1
position: 3432653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3432700:-1
position: 3432700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3404262-3404512:-1:exon

position:3404262:-1
position: 3404262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3404512:-1
position: 3404512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3400130-3400363:-1:exon

position:3400130:-1
position: 3400130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3400363:-1
position: 3400363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3390324-3391582:-1:exon

position:3391582:-1
position: 3391582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989256
product: spindlin-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033046448.1
SIO_010081: LOC116989256
subclass of: SO_0000673
so part of: LOC116989256
location: complement(join(3390324..3391582,3400130..3400363,3404262..3404512,3432653..3432700,3470892..3470920,3516702..3516770))
location: region:3390324-3516770:-1
so has part: feature:3516702-3516770:-1:exon
so has part: feature:3470892-3470920:-1:exon
so has part: feature:3432653-3432700:-1:exon
so has part: feature:3404262-3404512:-1:exon
so has part: feature:3400130-3400363:-1:exon
so has part: feature:3390324-3391582:-1:exon

position:3516770:-1
position: 3516770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3516702-3516770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3470892-3470920:-1:exon

position:3470892:-1
position: 3470892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3470920:-1
position: 3470920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3432653-3432700:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3404262-3404512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3400130-3400363:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3390324-3391582:-1:exon

LOC116989256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindlin-1-like isoform X1
translation: MSLRRRWEAWVAGIHVNMLKRKKPHRKRSKADASDPVAYKQRSIVGSKVQHGWREKTGVVTEWKGTVLDQLPVNPSLFLVKYDDFDCVYGIELFKDERVSTLEILPDKSGRTKIMDGDLAELIVGKAVEHMFEKDDGSKNEWRGMVLARAPVMTTWYYITYEKDPVLYMYQLLEDYKEGDLRILPDSENKQVLPTEPGEVIESLVGKQVEYVTEDGTKRTGLVIHQVQAKPSVYFIKFDDDFHIYVYDLVKTS
SIO_010081: LOC116989256
subclass of: SO_0000673
so part of: LOC116989256
location: complement(join(3391383..3391582,3400130..3400363,3404262..3404512,3432653..3432700,3470892..3470920))
location: region:3391383-3470920:-1
so has part: feature:3470892-3470920:-1:exon
so has part: feature:3432653-3432700:-1:exon
so has part: feature:3404262-3404512:-1:exon
so has part: feature:3400130-3400363:-1:exon
so has part: feature:3391383-3391582:-1:exon

XP_032902339.1
type: Protein
SIO_000068: ncbiprotein

position:3391383:-1
position: 3391383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3470892-3470920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3432653-3432700:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3404262-3404512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3400130-3400363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3391383-3391582:-1:exon

LOC116989256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindlin-1-like isoform X2
translation: MLKRKKPHRKRSKADASDPVAYKQRSIVGSKVQHGWREKTGVVTEWKGTVLDQLPVNPSLFLVKYDDFDCVYGIELFKDERVSTLEILPDKSGRTKIMDGDLAELIVGKAVEHMFEKDDGSKNEWRGMVLARAPVMTTWYYITYEKDPVLYMYQLLEDYKEGDLRILPDSENKQVLPTEPGEVIESLVGKQVEYVTEDGTKRTGLVIHQVQAKPSVYFIKFDDDFHIYVYDLVKTS
SIO_010081: LOC116989256
subclass of: SO_0000673
so part of: LOC116989256
location: complement(join(3391383..3391582,3400130..3400363,3404262..3404512,3432653..3432678))
location: region:3391383-3432678:-1
so has part: feature:3432653-3432678:-1:exon
so has part: feature:3404262-3404512:-1:exon
so has part: feature:3400130-3400363:-1:exon
so has part: feature:3391383-3391582:-1:exon

XP_032902340.1
type: Protein
SIO_000068: ncbiprotein

position:3432678:-1
position: 3432678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3432653-3432678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3404262-3404512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3400130-3400363:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3391383-3391582:-1:exon

LOC116989688
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3702051..3705910)
location: region:3702051-3705910:-1
so has part: feature:3702051-3705910:-1:exon
subclass of: SO_0000011

116989688
type: Gene
SIO_000068: ncbigene

position:3702051:-1
position: 3702051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3705910:-1
position: 3705910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3702051-3705910:-1:exon

LOC116989688
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989688
product: uncharacterized LOC116989688
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004416294.1
SIO_010081: LOC116989688
subclass of: SO_0000673
so part of: LOC116989688
location: complement(join(3702051..3702070,3703636..3703640,3705891..3705910))
location: region:3702051-3705910:-1
so has part: feature:3705891-3705910:-1:exon
so has part: feature:3703636-3703640:-1:exon
so has part: feature:3702051-3702070:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3705891-3705910:-1:exon

position:3705891:-1
position: 3705891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3703636-3703640:-1:exon

position:3703636:-1
position: 3703636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3703640:-1
position: 3703640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3702051-3702070:-1:exon

position:3702070:-1
position: 3702070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989257
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3722222..3739640
location: region:3722222-3739640:1
so has part: feature:3722222-3739640:1:exon
subclass of: SO_0000010

116989257
type: Gene
SIO_000068: ncbigene

position:3722222:1
position: 3722222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3739640:1
position: 3739640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3722222-3739640:1:exon

LOC116989257
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989257
product: sphingosine 1-phosphate receptor 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 45 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_033046450.1
SIO_010081: LOC116989257
subclass of: SO_0000673
so part of: LOC116989257
location: join(3722222..3722690,3736861..3739640)
location: region:3722222-3739640:1
so has part: feature:3722222-3722690:1:exon
so has part: feature:3736861-3739640:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3722222-3722690:1:exon

position:3722690:1
position: 3722690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3736861-3739640:1:exon

position:3736861:1
position: 3736861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989257
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingosine 1-phosphate receptor 3-like
translation: MLTGVEMSLAHNFPVNEIINQHYNYSGKLDRRVKGGSATVKIVIILLACVLIVVENVMVLVAIWKNKKFHTRMYYFIGNLALSDLLAGVAYVINILMSGDRTLTLTPNLWFVREGSMFVALCASTFSLLAIAIERHMTMVKMRPYDSKKQYRVFLLLGACWIISVLLGILPITGWNCIGHLPWCSTILPLYAKHYVAFCVTILTVILLAVVILYVRIYRLVNSSGRKVTGRKSPHGAQSERAMALLRTVMIVLGVFIACWSPLFVFLMLDVACSPKQCSVLYKADWCVALAVLNSALNPIIYTLTSREMRGAFFRLLCCCFLGSRVARSLPIAPTGDNSKSKSSGSNFNKPKEAIDSPTMLISACIVKTSDFSLEKGKS
SIO_010081: LOC116989257
subclass of: SO_0000673
so part of: LOC116989257
location: 3737007..3738146
location: region:3737007-3738146:1
so has part: feature:3737007-3738146:1:exon

XP_032902341.1
type: Protein
SIO_000068: ncbiprotein

position:3737007:1
position: 3737007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3738146:1
position: 3738146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3737007-3738146:1:exon

LOC116989258
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3760192..3770453)
location: region:3760192-3770453:-1
so has part: feature:3760192-3770453:-1:exon
subclass of: SO_0000010

116989258
type: Gene
SIO_000068: ncbigene

position:3760192:-1
position: 3760192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3770453:-1
position: 3770453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3760192-3770453:-1:exon

LOC116989258
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989258
product: WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033046451.1
SIO_010081: LOC116989258
subclass of: SO_0000673
so part of: LOC116989258
location: complement(join(3760192..3761794,3769994..3770453))
location: region:3760192-3770453:-1
so has part: feature:3769994-3770453:-1:exon
so has part: feature:3760192-3761794:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3769994-3770453:-1:exon

position:3769994:-1
position: 3769994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3760192-3761794:-1:exon

position:3761794:-1
position: 3761794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989258
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 1-like
translation: MLVLLHGPADFRRCCRDGLGLMHARKSRAVRMQPRTFVIVWCLLRLAGGANLPRGKLSYPGACPNQLNPNLWVDAQSTCERECNADEDCQSFEKCCRNVCGLKSCVAARFADGSLASSALPREATCERVVCTQQGSECDIWDGQPVCKCRDRCEKEPNFTCASDGLTYYNRCYMDAEACIRGISLAVVTCRYHITWPNTSPQPLETTANPTSTSWLEDSVPPALYTNPFHQSVYVGGTVSFHCDVSGRPRPDITWEKQSDHLENIIMRPDQMYANLVVTNIGQLVIYSVQQDDAGIYTCTARNAAGLLRADFPLSVIRRGHSGETAVAGGGVRPVPSAECFKDPDKRQCGRQQVRWFYDHKRTTCSTFGWGGCEGGGNQFETYEECRASCANETVNICTFPAVQGPCKLWEARWAYNSLMKQCHAFVYSGCEGNKNNFESREVCEETCPFPKYQQCKACKPRHKIVPSFCRSDYAIVGRVTEIVEEQDSGVARFTLDQVLKDEKMGLKFFDFKHLEVIMLNMDWSCPCPNITLSDGPLLIMGDVHDGMAVLGAESYVRTISDKRVKKLHEIIEKKTCELLHRFQD
SIO_010081: LOC116989258
subclass of: SO_0000673
so part of: LOC116989258
location: complement(join(3760298..3761794,3769994..3770254))
location: region:3760298-3770254:-1
so has part: feature:3769994-3770254:-1:exon
so has part: feature:3760298-3761794:-1:exon

XP_032902342.1
type: Protein
SIO_000068: ncbiprotein

position:3760298:-1
position: 3760298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3770254:-1
position: 3770254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3769994-3770254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3760298-3761794:-1:exon

LOC116989682
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3793153..3804048
location: region:3793153-3804048:1
so has part: feature:3793153-3804048:1:exon
subclass of: SO_0000011

116989682
type: Gene
SIO_000068: ncbigene

position:3793153:1
position: 3793153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3804048:1
position: 3804048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3793153-3804048:1:exon

LOC116989682
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989682
product: uncharacterized LOC116989682
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416289.1
SIO_010081: LOC116989682
subclass of: SO_0000673
so part of: LOC116989682
location: join(3793153..3793163,3801671..3801675,3803948..3804048)
location: region:3793153-3804048:1
so has part: feature:3793153-3793163:1:exon
so has part: feature:3801671-3801675:1:exon
so has part: feature:3803948-3804048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3793153-3793163:1:exon

position:3793163:1
position: 3793163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3801671-3801675:1:exon

position:3801671:1
position: 3801671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3801675:1
position: 3801675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3803948-3804048:1:exon

position:3803948:1
position: 3803948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fam174c
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: fam174c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3838341..3870823
location: region:3838341-3870823:1
so has part: feature:3838341-3870823:1:exon
subclass of: SO_0000010

116989259
type: Gene
SIO_000068: ncbigene

position:3838341:1
position: 3838341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3870823:1
position: 3870823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3838341-3870823:1:exon

fam174c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fam174c
product: family with sequence similarity 174 member C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033046452.1
SIO_010081: fam174c
subclass of: SO_0000673
so part of: fam174c
location: join(3838341..3838697,3853883..3854005,3857704..3857784,3870071..3870823)
location: region:3838341-3870823:1
so has part: feature:3838341-3838697:1:exon
so has part: feature:3853883-3854005:1:exon
so has part: feature:3857704-3857784:1:exon
so has part: feature:3870071-3870823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3838341-3838697:1:exon

position:3838697:1
position: 3838697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3853883-3854005:1:exon

position:3853883:1
position: 3853883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3854005:1
position: 3854005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3857704-3857784:1:exon

position:3857704:1
position: 3857704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3857784:1
position: 3857784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3870071-3870823:1:exon

position:3870071:1
position: 3870071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fam174c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fam174c
product: family with sequence similarity 174 member C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033046453.1
SIO_010081: fam174c
subclass of: SO_0000673
so part of: fam174c
location: join(3838350..3838697,3853883..3854005,3870071..3870823)
location: region:3838350-3870823:1
so has part: feature:3838350-3838697:1:exon
so has part: feature:3853883-3854005:1:exon
so has part: feature:3870071-3870823:1:exon

position:3838350:1
position: 3838350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3838350-3838697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3853883-3854005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3870071-3870823:1:exon

fam174c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fam174c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM174C isoform X2
translation: MTLGPVLPAAAAALCLTLTLTLTLALPPARADNVTEQSGTGTASTPPRAAGGSSEGSVIGRAVAVALGVSGLGLVYLLVRGLRLKKKQRKKYGLLSSFDDHVEMAPMDTDDDDTTLFEAKSLRR
SIO_010081: fam174c
subclass of: SO_0000673
so part of: fam174c
location: join(3838450..3838697,3853883..3854005,3870071..3870074)
location: region:3838450-3870074:1
so has part: feature:3838450-3838697:1:exon
so has part: feature:3853883-3854005:1:exon
so has part: feature:3870071-3870074:1:exon

XP_032902344.1
type: Protein
SIO_000068: ncbiprotein

position:3838450:1
position: 3838450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3870074:1
position: 3870074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3838450-3838697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3853883-3854005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3870071-3870074:1:exon

fam174c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fam174c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM174C isoform X1
translation: MTLGPVLPAAAAALCLTLTLTLTLALPPARADNVTEQSGTGTASTPPRAAGGSSEGSVIGRAVAVALGVSGLGLVYLLVRGLRLKKKQRKKYGLLSSFDDHVEMAPMDTDDDDTTLFEAKSLRRSVNYTASQSC
SIO_010081: fam174c
subclass of: SO_0000673
so part of: fam174c
location: join(3838450..3838697,3853883..3854005,3857704..3857737)
location: region:3838450-3857737:1
so has part: feature:3838450-3838697:1:exon
so has part: feature:3853883-3854005:1:exon
so has part: feature:3857704-3857737:1:exon

XP_032902343.1
type: Protein
SIO_000068: ncbiprotein

position:3857737:1
position: 3857737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3838450-3838697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3853883-3854005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3857704-3857737:1:exon

LOC116989774
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989774
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4341876..4342067
location: region:4341876-4342067:1
so has part: feature:4341876-4342067:1:exon
subclass of: SO_0000623

116989774
type: Gene
SIO_000068: ncbigene

position:4341876:1
position: 4341876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4342067:1
position: 4342067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4341876-4342067:1:exon

LOC116989774
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snRNA
gene: LOC116989774
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004416322.1
SIO_010081: LOC116989774
subclass of: SO_0000673
so part of: LOC116989774
location: 4341876..4342067
location: region:4341876-4342067:1
so has part: feature:4341876-4342067:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4341876-4342067:1:exon

LOC116989765
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989765
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(4460929..4461034)
location: region:4460929-4461034:-1
so has part: feature:4460929-4461034:-1:exon

116989765
type: Gene
SIO_000068: ncbigene

position:4460929:-1
position: 4460929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4461034:-1
position: 4461034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4460929-4461034:-1:exon

LOC116989765
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116989765
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116989765
subclass of: SO_0000673
so part of: LOC116989765
location: complement(4460929..4461034)
location: region:4460929-4461034:-1
so has part: feature:4460929-4461034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4460929-4461034:-1:exon

LOC116989260
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4535399..4542799)
location: region:4535399-4542799:-1
so has part: feature:4535399-4542799:-1:exon
subclass of: SO_0000011

116989260
type: Gene
SIO_000068: ncbigene

position:4535399:-1
position: 4535399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4542799:-1
position: 4542799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4535399-4542799:-1:exon

LOC116989260
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989260
product: uncharacterized LOC116989260
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416200.1
SIO_010081: LOC116989260
subclass of: SO_0000673
so part of: LOC116989260
location: complement(join(4535399..4535515,4536205..4536592,4538339..4538341,4542777..4542799))
location: region:4535399-4542799:-1
so has part: feature:4542777-4542799:-1:exon
so has part: feature:4538339-4538341:-1:exon
so has part: feature:4536205-4536592:-1:exon
so has part: feature:4535399-4535515:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4542777-4542799:-1:exon

position:4542777:-1
position: 4542777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4538339-4538341:-1:exon

position:4538339:-1
position: 4538339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4538341:-1
position: 4538341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4536205-4536592:-1:exon

position:4536205:-1
position: 4536205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4536592:-1
position: 4536592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4535399-4535515:-1:exon

position:4535515:-1
position: 4535515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

efna2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: efna2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4549520..4968820)
location: region:4549520-4968820:-1
so has part: feature:4549520-4968820:-1:exon
subclass of: SO_0000010

116989261
type: Gene
SIO_000068: ncbigene

position:4549520:-1
position: 4549520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4968820:-1
position: 4968820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4549520-4968820:-1:exon

efna2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: efna2
product: ephrin A2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033046454.1
SIO_010081: efna2
subclass of: SO_0000673
so part of: efna2
location: complement(join(4549520..4551570,4559609..4559680,4562738..4562803,4607870..4608162,4968513..4968820))
location: region:4549520-4968820:-1
so has part: feature:4968513-4968820:-1:exon
so has part: feature:4607870-4608162:-1:exon
so has part: feature:4562738-4562803:-1:exon
so has part: feature:4559609-4559680:-1:exon
so has part: feature:4549520-4551570:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4968513-4968820:-1:exon

position:4968513:-1
position: 4968513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4607870-4608162:-1:exon

position:4607870:-1
position: 4607870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4608162:-1
position: 4608162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4562738-4562803:-1:exon

position:4562738:-1
position: 4562738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4562803:-1
position: 4562803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4559609-4559680:-1:exon

position:4559609:-1
position: 4559609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4559680:-1
position: 4559680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4549520-4551570:-1:exon

position:4551570:-1
position: 4551570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

efna2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: efna2
product: ephrin A2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033046455.1
SIO_010081: efna2
subclass of: SO_0000673
so part of: efna2
location: complement(join(4549521..4551570,4562738..4562803,4607870..4608162,4968513..4968817))
location: region:4549521-4968817:-1
so has part: feature:4968513-4968817:-1:exon
so has part: feature:4607870-4608162:-1:exon
so has part: feature:4562738-4562803:-1:exon
so has part: feature:4549521-4551570:-1:exon

position:4549521:-1
position: 4549521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4968817:-1
position: 4968817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4968513-4968817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4607870-4608162:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4562738-4562803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4549521-4551570:-1:exon

efna2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: efna2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin-A2 isoform X2
translation: MNVEVAVLLFLALWVCVWTEDPGKVVADRYAVYWNSTNPRFHRGDYTVDVCINDYLDIYCPHYDDSVPEEKTESYILYMVNFDGYRSCDHKDNGFKRWECNRPRTPNGPLKFSEKFQLFTPFSLGFEFRPGNEYYYISSPHPNIIGKPCLKLKVYVRPTNDSIYESPEPYHNNDGITTFRISWFVLAVTIILLFLTS
SIO_010081: efna2
subclass of: SO_0000673
so part of: efna2
location: complement(join(4551455..4551570,4562738..4562803,4607870..4608162,4968513..4968631))
location: region:4551455-4968631:-1
so has part: feature:4968513-4968631:-1:exon
so has part: feature:4607870-4608162:-1:exon
so has part: feature:4562738-4562803:-1:exon
so has part: feature:4551455-4551570:-1:exon

XP_032902346.1
type: Protein
SIO_000068: ncbiprotein

position:4551455:-1
position: 4551455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4968631:-1
position: 4968631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4968513-4968631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4607870-4608162:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4562738-4562803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4551455-4551570:-1:exon

efna2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: efna2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin-A2 isoform X1
translation: MNVEVAVLLFLALWVCVWTEDPGKVVADRYAVYWNSTNPRFHRGDYTVDVCINDYLDIYCPHYDDSVPEEKTESYILYMVNFDGYRSCDHKDNGFKRWECNRPRTPNGPLKFSEKFQLFTPFSLGFEFRPGNEYYYISSPHPNIIGKPCLKLKVYVRPTNSCMEAVGLNEGDFDVNNSSVEASDDSIYESPEPYHNNDGITTFRISWFVLAVTIILLFLTS
SIO_010081: efna2
subclass of: SO_0000673
so part of: efna2
location: complement(join(4551455..4551570,4559609..4559680,4562738..4562803,4607870..4608162,4968513..4968631))
location: region:4551455-4968631:-1
so has part: feature:4968513-4968631:-1:exon
so has part: feature:4607870-4608162:-1:exon
so has part: feature:4562738-4562803:-1:exon
so has part: feature:4559609-4559680:-1:exon
so has part: feature:4551455-4551570:-1:exon

XP_032902345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4968513-4968631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4607870-4608162:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4562738-4562803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4559609-4559680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4551455-4551570:-1:exon

LOC116989264
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4914649..4927286)
location: region:4914649-4927286:-1
so has part: feature:4914649-4927286:-1:exon
subclass of: SO_0000011

116989264
type: Gene
SIO_000068: ncbigene

position:4914649:-1
position: 4914649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4927286:-1
position: 4927286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4914649-4927286:-1:exon

LOC116989264
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989264
product: uncharacterized LOC116989264
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004416201.1
SIO_010081: LOC116989264
subclass of: SO_0000673
so part of: LOC116989264
location: complement(join(4914649..4915316,4921137..4921146,4927274..4927286))
location: region:4914649-4927286:-1
so has part: feature:4927274-4927286:-1:exon
so has part: feature:4921137-4921146:-1:exon
so has part: feature:4914649-4915316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4927274-4927286:-1:exon

position:4927274:-1
position: 4927274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4921137-4921146:-1:exon

position:4921137:-1
position: 4921137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4921146:-1
position: 4921146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4914649-4915316:-1:exon

position:4915316:-1
position: 4915316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989683
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989683
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4983785..4998091)
location: region:4983785-4998091:-1
so has part: feature:4983785-4998091:-1:exon
subclass of: SO_0000011

116989683
type: Gene
SIO_000068: ncbigene

position:4983785:-1
position: 4983785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4998091:-1
position: 4998091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4983785-4998091:-1:exon

LOC116989683
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989683
product: uncharacterized LOC116989683
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004416290.1
SIO_010081: LOC116989683
subclass of: SO_0000673
so part of: LOC116989683
location: complement(join(4983785..4983822,4995314..4995317,4997959..4998091))
location: region:4983785-4998091:-1
so has part: feature:4997959-4998091:-1:exon
so has part: feature:4995314-4995317:-1:exon
so has part: feature:4983785-4983822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4997959-4998091:-1:exon

position:4997959:-1
position: 4997959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4995314-4995317:-1:exon

position:4995314:-1
position: 4995314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4995317:-1
position: 4995317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4983785-4983822:-1:exon

position:4983822:-1
position: 4983822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989265
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5451205..5477714)
location: region:5451205-5477714:-1
so has part: feature:5451205-5477714:-1:exon
subclass of: SO_0000011

116989265
type: Gene
SIO_000068: ncbigene

position:5451205:-1
position: 5451205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5477714:-1
position: 5477714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5451205-5477714:-1:exon

LOC116989265
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989265
product: uncharacterized LOC116989265
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416202.1
SIO_010081: LOC116989265
subclass of: SO_0000673
so part of: LOC116989265
location: complement(join(5451205..5451290,5455955..5456114,5477537..5477714))
location: region:5451205-5477714:-1
so has part: feature:5477537-5477714:-1:exon
so has part: feature:5455955-5456114:-1:exon
so has part: feature:5451205-5451290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5477537-5477714:-1:exon

position:5477537:-1
position: 5477537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5455955-5456114:-1:exon

position:5455955:-1
position: 5455955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5456114:-1
position: 5456114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5451205-5451290:-1:exon

position:5451290:-1
position: 5451290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989266
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5569615..5720358
location: region:5569615-5720358:1
so has part: feature:5569615-5720358:1:exon
subclass of: SO_0000010

116989266
type: Gene
SIO_000068: ncbigene

position:5569615:1
position: 5569615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5720358:1
position: 5720358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5569615-5720358:1:exon

LOC116989266
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989266
product: calcium/calmodulin-dependent protein kinase type IV-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033046456.1
SIO_010081: LOC116989266
subclass of: SO_0000673
so part of: LOC116989266
location: join(5569615..5570026,5639018..5639096,5640423..5640428,5656827..5656889,5678722..5678804,5681125..5681197,5694226..5694316,5699126..5699200,5711812..5711887,5716091..5716217,5717718..5717870,5719557..5720358)
location: region:5569615-5720358:1
so has part: feature:5569615-5570026:1:exon
so has part: feature:5639018-5639096:1:exon
so has part: feature:5640423-5640428:1:exon
so has part: feature:5656827-5656889:1:exon
so has part: feature:5678722-5678804:1:exon
so has part: feature:5681125-5681197:1:exon
so has part: feature:5694226-5694316:1:exon
so has part: feature:5699126-5699200:1:exon
so has part: feature:5711812-5711887:1:exon
so has part: feature:5716091-5716217:1:exon
so has part: feature:5717718-5717870:1:exon
so has part: feature:5719557-5720358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5569615-5570026:1:exon

position:5570026:1
position: 5570026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5639018-5639096:1:exon

position:5639018:1
position: 5639018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5639096:1
position: 5639096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5640423-5640428:1:exon

position:5640423:1
position: 5640423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5640428:1
position: 5640428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5656827-5656889:1:exon

position:5656827:1
position: 5656827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5656889:1
position: 5656889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5678722-5678804:1:exon

position:5678722:1
position: 5678722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5678804:1
position: 5678804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5681125-5681197:1:exon

position:5681125:1
position: 5681125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5681197:1
position: 5681197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5694226-5694316:1:exon

position:5694226:1
position: 5694226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5694316:1
position: 5694316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5699126-5699200:1:exon

position:5699126:1
position: 5699126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5699200:1
position: 5699200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5711812-5711887:1:exon

position:5711812:1
position: 5711812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5711887:1
position: 5711887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5716091-5716217:1:exon

position:5716091:1
position: 5716091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5716217:1
position: 5716217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5717718-5717870:1:exon

position:5717718:1
position: 5717718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5717870:1
position: 5717870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5719557-5720358:1:exon

position:5719557:1
position: 5719557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989266
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989266
product: calcium/calmodulin-dependent protein kinase type IV-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033046458.1
SIO_010081: LOC116989266
subclass of: SO_0000673
so part of: LOC116989266
location: join(5569615..5570026,5639018..5639096,5656827..5656889,5678722..5678804,5681125..5681197,5694226..5694316,5699126..5699200,5711812..5711887,5716091..5716217,5717718..5717870,5719557..5720358)
location: region:5569615-5720358:1
so has part: feature:5569615-5570026:1:exon
so has part: feature:5639018-5639096:1:exon
so has part: feature:5656827-5656889:1:exon
so has part: feature:5678722-5678804:1:exon
so has part: feature:5681125-5681197:1:exon
so has part: feature:5694226-5694316:1:exon
so has part: feature:5699126-5699200:1:exon
so has part: feature:5711812-5711887:1:exon
so has part: feature:5716091-5716217:1:exon
so has part: feature:5717718-5717870:1:exon
so has part: feature:5719557-5720358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5569615-5570026:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5639018-5639096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5656827-5656889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5678722-5678804:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5681125-5681197:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5694226-5694316:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5699126-5699200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5711812-5711887:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5716091-5716217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5717718-5717870:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5719557-5720358:1:exon

LOC116989266
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent protein kinase type IV-like isoform X1
translation: MLSMVIMPASKSGTSCDYWIDGSHREITFEDYYTVAQELGRGATSIVYRCQEKQTQRQYAAKVLQKTNKIDKKIARTEIGVLLRLSHPNIIKLKEIFETPTEIILILELVTGGELFDRIVEKGYYSERDAAHAVKQILEAVEYLHENGVVHRDLKPENLLYADLSSAAPLKIADFGLSKIVNEQVTMKTVCGTPGYCAPEILRGCTYGPEVDMWSVGVITYILLCGFEPFFDARGDQYMYSRILNCDYEFVSPWWDDVSLNAKDLVRKLIVQDPQKRQTVQQALQHPWVTGKAANVAHMDNAQKKMQEFNARRKLKAAVKAVVASSRLGNASNHSHSNHDSAKERHTSSSEPEQSPNEENGQNL
SIO_010081: LOC116989266
subclass of: SO_0000673
so part of: LOC116989266
location: join(5569905..5570026,5639018..5639096,5640423..5640428,5656827..5656889,5678722..5678804,5681125..5681197,5694226..5694316,5699126..5699200,5711812..5711887,5716091..5716217,5717718..5717870,5719557..5719703)
location: region:5569905-5719703:1
so has part: feature:5569905-5570026:1:exon
so has part: feature:5639018-5639096:1:exon
so has part: feature:5640423-5640428:1:exon
so has part: feature:5656827-5656889:1:exon
so has part: feature:5678722-5678804:1:exon
so has part: feature:5681125-5681197:1:exon
so has part: feature:5694226-5694316:1:exon
so has part: feature:5699126-5699200:1:exon
so has part: feature:5711812-5711887:1:exon
so has part: feature:5716091-5716217:1:exon
so has part: feature:5717718-5717870:1:exon
so has part: feature:5719557-5719703:1:exon

XP_032902347.1
type: Protein
SIO_000068: ncbiprotein

position:5569905:1
position: 5569905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5719703:1
position: 5719703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5569905-5570026:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5639018-5639096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5640423-5640428:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5656827-5656889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5678722-5678804:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5681125-5681197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5694226-5694316:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5699126-5699200:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5711812-5711887:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5716091-5716217:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5717718-5717870:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5719557-5719703:1:exon

LOC116989266
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent protein kinase type IV-like isoform X2
translation: MLSMVIMPASKSGTSCDYWIDGSHREITFEDYYTVAQELGRGATSIVYRCQEKQTQRQYAAKVLQKTIDKKIARTEIGVLLRLSHPNIIKLKEIFETPTEIILILELVTGGELFDRIVEKGYYSERDAAHAVKQILEAVEYLHENGVVHRDLKPENLLYADLSSAAPLKIADFGLSKIVNEQVTMKTVCGTPGYCAPEILRGCTYGPEVDMWSVGVITYILLCGFEPFFDARGDQYMYSRILNCDYEFVSPWWDDVSLNAKDLVRKLIVQDPQKRQTVQQALQHPWVTGKAANVAHMDNAQKKMQEFNARRKLKAAVKAVVASSRLGNASNHSHSNHDSAKERHTSSSEPEQSPNEENGQNL
SIO_010081: LOC116989266
subclass of: SO_0000673
so part of: LOC116989266
location: join(5569905..5570026,5639018..5639096,5656827..5656889,5678722..5678804,5681125..5681197,5694226..5694316,5699126..5699200,5711812..5711887,5716091..5716217,5717718..5717870,5719557..5719703)
location: region:5569905-5719703:1
so has part: feature:5569905-5570026:1:exon
so has part: feature:5639018-5639096:1:exon
so has part: feature:5656827-5656889:1:exon
so has part: feature:5678722-5678804:1:exon
so has part: feature:5681125-5681197:1:exon
so has part: feature:5694226-5694316:1:exon
so has part: feature:5699126-5699200:1:exon
so has part: feature:5711812-5711887:1:exon
so has part: feature:5716091-5716217:1:exon
so has part: feature:5717718-5717870:1:exon
so has part: feature:5719557-5719703:1:exon

XP_032902349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5569905-5570026:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5639018-5639096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5656827-5656889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5678722-5678804:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5681125-5681197:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5694226-5694316:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5699126-5699200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5711812-5711887:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5716091-5716217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5717718-5717870:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5719557-5719703:1:exon

pwwp3a
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: pwwp3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5746673..5808107
location: region:5746673-5808107:1
so has part: feature:5746673-5808107:1:exon
subclass of: SO_0000010

116989267
type: Gene
SIO_000068: ncbigene

position:5746673:1
position: 5746673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5808107:1
position: 5808107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5746673-5808107:1:exon

pwwp3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pwwp3a
product: PWWP domain containing 3A, DNA repair factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033046459.1
SIO_010081: pwwp3a
subclass of: SO_0000673
so part of: pwwp3a
location: join(5746673..5746988,5762753..5762870,5774775..5774863,5775652..5775722,5777487..5778740,5784603..5784731,5786690..5786760,5787914..5787999,5790494..5790554,5792322..5792397,5792950..5793000,5796004..5796449,5803452..5803540,5807065..5808107)
location: region:5746673-5808107:1
so has part: feature:5746673-5746988:1:exon
so has part: feature:5762753-5762870:1:exon
so has part: feature:5774775-5774863:1:exon
so has part: feature:5775652-5775722:1:exon
so has part: feature:5777487-5778740:1:exon
so has part: feature:5784603-5784731:1:exon
so has part: feature:5786690-5786760:1:exon
so has part: feature:5787914-5787999:1:exon
so has part: feature:5790494-5790554:1:exon
so has part: feature:5792322-5792397:1:exon
so has part: feature:5792950-5793000:1:exon
so has part: feature:5796004-5796449:1:exon
so has part: feature:5803452-5803540:1:exon
so has part: feature:5807065-5808107:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5746673-5746988:1:exon

position:5746988:1
position: 5746988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5762753-5762870:1:exon

position:5762753:1
position: 5762753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5762870:1
position: 5762870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5774775-5774863:1:exon

position:5774775:1
position: 5774775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5774863:1
position: 5774863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5775652-5775722:1:exon

position:5775652:1
position: 5775652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5775722:1
position: 5775722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5777487-5778740:1:exon

position:5777487:1
position: 5777487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5778740:1
position: 5778740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5784603-5784731:1:exon

position:5784603:1
position: 5784603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5784731:1
position: 5784731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5786690-5786760:1:exon

position:5786690:1
position: 5786690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5786760:1
position: 5786760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5787914-5787999:1:exon

position:5787914:1
position: 5787914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5787999:1
position: 5787999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5790494-5790554:1:exon

position:5790494:1
position: 5790494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5790554:1
position: 5790554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5792322-5792397:1:exon

position:5792322:1
position: 5792322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5792397:1
position: 5792397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5792950-5793000:1:exon

position:5792950:1
position: 5792950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5793000:1
position: 5793000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5796004-5796449:1:exon

position:5796004:1
position: 5796004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5796449:1
position: 5796449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5803452-5803540:1:exon

position:5803452:1
position: 5803452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5803540:1
position: 5803540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5807065-5808107:1:exon

position:5807065:1
position: 5807065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pwwp3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pwwp3a
product: PWWP domain containing 3A, DNA repair factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033046461.1
SIO_010081: pwwp3a
subclass of: SO_0000673
so part of: pwwp3a
location: join(5746728..5746988,5762750..5762870,5774775..5774863,5775652..5775722,5777487..5778740,5784603..5784731,5786690..5786760,5787914..5787999,5790494..5790554,5792322..5792397,5792950..5793000,5796004..5796449,5803452..5803540,5807065..5808107)
location: region:5746728-5808107:1
so has part: feature:5746728-5746988:1:exon
so has part: feature:5762750-5762870:1:exon
so has part: feature:5774775-5774863:1:exon
so has part: feature:5775652-5775722:1:exon
so has part: feature:5777487-5778740:1:exon
so has part: feature:5784603-5784731:1:exon
so has part: feature:5786690-5786760:1:exon
so has part: feature:5787914-5787999:1:exon
so has part: feature:5790494-5790554:1:exon
so has part: feature:5792322-5792397:1:exon
so has part: feature:5792950-5793000:1:exon
so has part: feature:5796004-5796449:1:exon
so has part: feature:5803452-5803540:1:exon
so has part: feature:5807065-5808107:1:exon

position:5746728:1
position: 5746728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5746728-5746988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5762750-5762870:1:exon

position:5762750:1
position: 5762750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5774775-5774863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5775652-5775722:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5777487-5778740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5784603-5784731:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5786690-5786760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5787914-5787999:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5790494-5790554:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5792322-5792397:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5792950-5793000:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796004-5796449:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5803452-5803540:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5807065-5808107:1:exon

pwwp3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pwwp3a
product: PWWP domain containing 3A, DNA repair factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033046462.1
SIO_010081: pwwp3a
subclass of: SO_0000673
so part of: pwwp3a
location: join(5746728..5746988,5762753..5762870,5774775..5774863,5775652..5775722,5777487..5778740,5784630..5784731,5786690..5786760,5787914..5787999,5790494..5790554,5792322..5792397,5792950..5793000,5796004..5796449,5803452..5803540,5807065..5808107)
location: region:5746728-5808107:1
so has part: feature:5746728-5746988:1:exon
so has part: feature:5762753-5762870:1:exon
so has part: feature:5774775-5774863:1:exon
so has part: feature:5775652-5775722:1:exon
so has part: feature:5777487-5778740:1:exon
so has part: feature:5784630-5784731:1:exon
so has part: feature:5786690-5786760:1:exon
so has part: feature:5787914-5787999:1:exon
so has part: feature:5790494-5790554:1:exon
so has part: feature:5792322-5792397:1:exon
so has part: feature:5792950-5793000:1:exon
so has part: feature:5796004-5796449:1:exon
so has part: feature:5803452-5803540:1:exon
so has part: feature:5807065-5808107:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5746728-5746988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5762753-5762870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5774775-5774863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5775652-5775722:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5777487-5778740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5784630-5784731:1:exon

position:5784630:1
position: 5784630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5786690-5786760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5787914-5787999:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5790494-5790554:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5792322-5792397:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5792950-5793000:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796004-5796449:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5803452-5803540:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5807065-5808107:1:exon

pwwp3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pwwp3a
product: PWWP domain containing 3A, DNA repair factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033046463.1
SIO_010081: pwwp3a
subclass of: SO_0000673
so part of: pwwp3a
location: join(5746728..5746988,5762753..5762870,5774775..5774863,5775652..5775722,5777487..5778740,5784633..5784731,5786690..5786760,5787914..5787999,5790494..5790554,5792322..5792397,5792950..5793000,5796004..5796449,5803452..5803540,5807065..5808107)
location: region:5746728-5808107:1
so has part: feature:5746728-5746988:1:exon
so has part: feature:5762753-5762870:1:exon
so has part: feature:5774775-5774863:1:exon
so has part: feature:5775652-5775722:1:exon
so has part: feature:5777487-5778740:1:exon
so has part: feature:5784633-5784731:1:exon
so has part: feature:5786690-5786760:1:exon
so has part: feature:5787914-5787999:1:exon
so has part: feature:5790494-5790554:1:exon
so has part: feature:5792322-5792397:1:exon
so has part: feature:5792950-5793000:1:exon
so has part: feature:5796004-5796449:1:exon
so has part: feature:5803452-5803540:1:exon
so has part: feature:5807065-5808107:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5746728-5746988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5762753-5762870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5774775-5774863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5775652-5775722:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5777487-5778740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5784633-5784731:1:exon

position:5784633:1
position: 5784633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5786690-5786760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5787914-5787999:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5790494-5790554:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5792322-5792397:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5792950-5793000:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796004-5796449:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5803452-5803540:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5807065-5808107:1:exon

pwwp3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pwwp3a
product: PWWP domain containing 3A, DNA repair factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033046460.1
SIO_010081: pwwp3a
subclass of: SO_0000673
so part of: pwwp3a
location: join(5746728..5746988,5762756..5762870,5774775..5774863,5775652..5775722,5777487..5778740,5784603..5784731,5786690..5786760,5787914..5787999,5790494..5790554,5792322..5792397,5792950..5793000,5796004..5796449,5803452..5803540,5807065..5808107)
location: region:5746728-5808107:1
so has part: feature:5746728-5746988:1:exon
so has part: feature:5762756-5762870:1:exon
so has part: feature:5774775-5774863:1:exon
so has part: feature:5775652-5775722:1:exon
so has part: feature:5777487-5778740:1:exon
so has part: feature:5784603-5784731:1:exon
so has part: feature:5786690-5786760:1:exon
so has part: feature:5787914-5787999:1:exon
so has part: feature:5790494-5790554:1:exon
so has part: feature:5792322-5792397:1:exon
so has part: feature:5792950-5793000:1:exon
so has part: feature:5796004-5796449:1:exon
so has part: feature:5803452-5803540:1:exon
so has part: feature:5807065-5808107:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5746728-5746988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5762756-5762870:1:exon

position:5762756:1
position: 5762756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5774775-5774863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5775652-5775722:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5777487-5778740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5784603-5784731:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5786690-5786760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5787914-5787999:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5790494-5790554:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5792322-5792397:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5792950-5793000:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5796004-5796449:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5803452-5803540:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5807065-5808107:1:exon

pwwp3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pwwp3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PWWP domain-containing DNA repair factor 3A isoform X1
translation: MSDFEFIFCSWQGRMWPARILLKSGISPTETPETNSDCLDVQIICLDKRLRVNRTDTRPFEEEQAKTISSGLVCREHFTHEEALEELTYRKALRIALNILAGNDSYLPPMTIKEPVLAKTELFNSEKLKNNACAFNSNGTQTALKPNGMHLLQEQGRICTRQSSRRASCVKNTPENEQTRTWTRSYTLNQSSINSRSIVEKAEGGRVGKRKRGRVKTDICHPQIDTSKNSSPQYEQPLQPMKSTPEKNRSLGKKCGRLRKEEESSIHACNSTVSGVKKDQNGNVKKGRPKSKFCKSTCEGNTDYFPSNCKSEKVWGSDISCSYLESTPKRGTCGHVGSYKFPLLLSSQRNIPFENKNDLSQTREINQKRKRGKKCAESKECLNASKTSADLDANVKSSNRSNVDSAEEGSPEQHFMSTIFGLPLDGQVSPINGCNQKHTNVDSPQTNCPAAEISKEGTFNASTITKEEGTLSTTLLQTHLGSSLFEIDEVGVQSSSLLSVEFSSPDCLSTSQFTEEVMEEEDDENLPSILAHQDQWSVAEGMLVWCKFQKYPYWPAMVRSVKSRIKKASILFVDENIIDVERNKKGFCVSIRTLKPFDCEERHQFTAAARHVYKNAIDWCVALIDDYRIRRGCGSFTGSFVEYCTAELSIPVRKSFEQDPSLMTFPSSSIASQVEGHSNSEYDATPTRQQPTKKLLPDRKKAARDRANEKLVQFIVKARGVEKHLQTVIKGKKHSKWLEEFKTRTRNSSVIDTYLEDDWQVDKVINYLKSVYEMSVGTELLVDCERSRFILDVLLPEAIICAIAEVEQISIKKAEEKYMKGPLHSEREVEHFNKEIEKEMKLKQRHLNEEESRS
SIO_010081: pwwp3a
subclass of: SO_0000673
so part of: pwwp3a
location: join(5762814..5762870,5774775..5774863,5775652..5775722,5777487..5778740,5784603..5784731,5786690..5786760,5787914..5787999,5790494..5790554,5792322..5792397,5792950..5793000,5796004..5796449,5803452..5803540,5807065..5807149)
location: region:5762814-5807149:1
so has part: feature:5762814-5762870:1:exon
so has part: feature:5774775-5774863:1:exon
so has part: feature:5775652-5775722:1:exon
so has part: feature:5777487-5778740:1:exon
so has part: feature:5784603-5784731:1:exon
so has part: feature:5786690-5786760:1:exon
so has part: feature:5787914-5787999:1:exon
so has part: feature:5790494-5790554:1:exon
so has part: feature:5792322-5792397:1:exon
so has part: feature:5792950-5793000:1:exon
so has part: feature:5796004-5796449:1:exon
so has part: feature:5803452-5803540:1:exon
so has part: feature:5807065-5807149:1:exon

XP_032902350.1
type: Protein
SIO_000068: ncbiprotein

position:5762814:1
position: 5762814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5807149:1
position: 5807149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5762814-5762870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5774775-5774863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5775652-5775722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5777487-5778740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5784603-5784731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5786690-5786760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5787914-5787999:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5790494-5790554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5792322-5792397:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5792950-5793000:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5796004-5796449:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5803452-5803540:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5807065-5807149:1:exon

pwwp3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pwwp3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PWWP domain-containing DNA repair factor 3A isoform X1
translation: MSDFEFIFCSWQGRMWPARILLKSGISPTETPETNSDCLDVQIICLDKRLRVNRTDTRPFEEEQAKTISSGLVCREHFTHEEALEELTYRKALRIALNILAGNDSYLPPMTIKEPVLAKTELFNSEKLKNNACAFNSNGTQTALKPNGMHLLQEQGRICTRQSSRRASCVKNTPENEQTRTWTRSYTLNQSSINSRSIVEKAEGGRVGKRKRGRVKTDICHPQIDTSKNSSPQYEQPLQPMKSTPEKNRSLGKKCGRLRKEEESSIHACNSTVSGVKKDQNGNVKKGRPKSKFCKSTCEGNTDYFPSNCKSEKVWGSDISCSYLESTPKRGTCGHVGSYKFPLLLSSQRNIPFENKNDLSQTREINQKRKRGKKCAESKECLNASKTSADLDANVKSSNRSNVDSAEEGSPEQHFMSTIFGLPLDGQVSPINGCNQKHTNVDSPQTNCPAAEISKEGTFNASTITKEEGTLSTTLLQTHLGSSLFEIDEVGVQSSSLLSVEFSSPDCLSTSQFTEEVMEEEDDENLPSILAHQDQWSVAEGMLVWCKFQKYPYWPAMVRSVKSRIKKASILFVDENIIDVERNKKGFCVSIRTLKPFDCEERHQFTAAARHVYKNAIDWCVALIDDYRIRRGCGSFTGSFVEYCTAELSIPVRKSFEQDPSLMTFPSSSIASQVEGHSNSEYDATPTRQQPTKKLLPDRKKAARDRANEKLVQFIVKARGVEKHLQTVIKGKKHSKWLEEFKTRTRNSSVIDTYLEDDWQVDKVINYLKSVYEMSVGTELLVDCERSRFILDVLLPEAIICAIAEVEQISIKKAEEKYMKGPLHSEREVEHFNKEIEKEMKLKQRHLNEEESRS
SIO_010081: pwwp3a
subclass of: SO_0000673
so part of: pwwp3a
location: join(5762814..5762870,5774775..5774863,5775652..5775722,5777487..5778740,5784603..5784731,5786690..5786760,5787914..5787999,5790494..5790554,5792322..5792397,5792950..5793000,5796004..5796449,5803452..5803540,5807065..5807149)
location: region:5762814-5807149:1
so has part: feature:5762814-5762870:1:exon
so has part: feature:5774775-5774863:1:exon
so has part: feature:5775652-5775722:1:exon
so has part: feature:5777487-5778740:1:exon
so has part: feature:5784603-5784731:1:exon
so has part: feature:5786690-5786760:1:exon
so has part: feature:5787914-5787999:1:exon
so has part: feature:5790494-5790554:1:exon
so has part: feature:5792322-5792397:1:exon
so has part: feature:5792950-5793000:1:exon
so has part: feature:5796004-5796449:1:exon
so has part: feature:5803452-5803540:1:exon
so has part: feature:5807065-5807149:1:exon

XP_032902351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5762814-5762870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5774775-5774863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5775652-5775722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5777487-5778740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5784603-5784731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5786690-5786760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5787914-5787999:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5790494-5790554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5792322-5792397:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5792950-5793000:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5796004-5796449:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5803452-5803540:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5807065-5807149:1:exon

pwwp3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pwwp3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PWWP domain-containing DNA repair factor 3A isoform X1
translation: MSDFEFIFCSWQGRMWPARILLKSGISPTETPETNSDCLDVQIICLDKRLRVNRTDTRPFEEEQAKTISSGLVCREHFTHEEALEELTYRKALRIALNILAGNDSYLPPMTIKEPVLAKTELFNSEKLKNNACAFNSNGTQTALKPNGMHLLQEQGRICTRQSSRRASCVKNTPENEQTRTWTRSYTLNQSSINSRSIVEKAEGGRVGKRKRGRVKTDICHPQIDTSKNSSPQYEQPLQPMKSTPEKNRSLGKKCGRLRKEEESSIHACNSTVSGVKKDQNGNVKKGRPKSKFCKSTCEGNTDYFPSNCKSEKVWGSDISCSYLESTPKRGTCGHVGSYKFPLLLSSQRNIPFENKNDLSQTREINQKRKRGKKCAESKECLNASKTSADLDANVKSSNRSNVDSAEEGSPEQHFMSTIFGLPLDGQVSPINGCNQKHTNVDSPQTNCPAAEISKEGTFNASTITKEEGTLSTTLLQTHLGSSLFEIDEVGVQSSSLLSVEFSSPDCLSTSQFTEEVMEEEDDENLPSILAHQDQWSVAEGMLVWCKFQKYPYWPAMVRSVKSRIKKASILFVDENIIDVERNKKGFCVSIRTLKPFDCEERHQFTAAARHVYKNAIDWCVALIDDYRIRRGCGSFTGSFVEYCTAELSIPVRKSFEQDPSLMTFPSSSIASQVEGHSNSEYDATPTRQQPTKKLLPDRKKAARDRANEKLVQFIVKARGVEKHLQTVIKGKKHSKWLEEFKTRTRNSSVIDTYLEDDWQVDKVINYLKSVYEMSVGTELLVDCERSRFILDVLLPEAIICAIAEVEQISIKKAEEKYMKGPLHSEREVEHFNKEIEKEMKLKQRHLNEEESRS
SIO_010081: pwwp3a
subclass of: SO_0000673
so part of: pwwp3a
location: join(5762814..5762870,5774775..5774863,5775652..5775722,5777487..5778740,5784603..5784731,5786690..5786760,5787914..5787999,5790494..5790554,5792322..5792397,5792950..5793000,5796004..5796449,5803452..5803540,5807065..5807149)
location: region:5762814-5807149:1
so has part: feature:5762814-5762870:1:exon
so has part: feature:5774775-5774863:1:exon
so has part: feature:5775652-5775722:1:exon
so has part: feature:5777487-5778740:1:exon
so has part: feature:5784603-5784731:1:exon
so has part: feature:5786690-5786760:1:exon
so has part: feature:5787914-5787999:1:exon
so has part: feature:5790494-5790554:1:exon
so has part: feature:5792322-5792397:1:exon
so has part: feature:5792950-5793000:1:exon
so has part: feature:5796004-5796449:1:exon
so has part: feature:5803452-5803540:1:exon
so has part: feature:5807065-5807149:1:exon

XP_032902352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5762814-5762870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5774775-5774863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5775652-5775722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5777487-5778740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5784603-5784731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5786690-5786760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5787914-5787999:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5790494-5790554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5792322-5792397:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5792950-5793000:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5796004-5796449:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5803452-5803540:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5807065-5807149:1:exon

pwwp3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pwwp3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PWWP domain-containing DNA repair factor 3A isoform X2
translation: MSDFEFIFCSWQGRMWPARILLKSGISPTETPETNSDCLDVQIICLDKRLRVNRTDTRPFEEEQAKTISSGLVCREHFTHEEALEELTYRKALRIALNILAGNDSYLPPMTIKEPVLAKTELFNSEKLKNNACAFNSNGTQTALKPNGMHLLQEQGRICTRQSSRRASCVKNTPENEQTRTWTRSYTLNQSSINSRSIVEKAEGGRVGKRKRGRVKTDICHPQIDTSKNSSPQYEQPLQPMKSTPEKNRSLGKKCGRLRKEEESSIHACNSTVSGVKKDQNGNVKKGRPKSKFCKSTCEGNTDYFPSNCKSEKVWGSDISCSYLESTPKRGTCGHVGSYKFPLLLSSQRNIPFENKNDLSQTREINQKRKRGKKCAESKECLNASKTSADLDANVKSSNRSNVDSAEEGSPEQHFMSTIFGLPLDGQVSPINGCNQKHTNVDSPQTNCPAAEISKEGTFNASTITKEEGTLSTTLLQTHLGSSLFEIDEVVEFSSPDCLSTSQFTEEVMEEEDDENLPSILAHQDQWSVAEGMLVWCKFQKYPYWPAMVRSVKSRIKKASILFVDENIIDVERNKKGFCVSIRTLKPFDCEERHQFTAAARHVYKNAIDWCVALIDDYRIRRGCGSFTGSFVEYCTAELSIPVRKSFEQDPSLMTFPSSSIASQVEGHSNSEYDATPTRQQPTKKLLPDRKKAARDRANEKLVQFIVKARGVEKHLQTVIKGKKHSKWLEEFKTRTRNSSVIDTYLEDDWQVDKVINYLKSVYEMSVGTELLVDCERSRFILDVLLPEAIICAIAEVEQISIKKAEEKYMKGPLHSEREVEHFNKEIEKEMKLKQRHLNEEESRS
SIO_010081: pwwp3a
subclass of: SO_0000673
so part of: pwwp3a
location: join(5762814..5762870,5774775..5774863,5775652..5775722,5777487..5778740,5784630..5784731,5786690..5786760,5787914..5787999,5790494..5790554,5792322..5792397,5792950..5793000,5796004..5796449,5803452..5803540,5807065..5807149)
location: region:5762814-5807149:1
so has part: feature:5762814-5762870:1:exon
so has part: feature:5774775-5774863:1:exon
so has part: feature:5775652-5775722:1:exon
so has part: feature:5777487-5778740:1:exon
so has part: feature:5784630-5784731:1:exon
so has part: feature:5786690-5786760:1:exon
so has part: feature:5787914-5787999:1:exon
so has part: feature:5790494-5790554:1:exon
so has part: feature:5792322-5792397:1:exon
so has part: feature:5792950-5793000:1:exon
so has part: feature:5796004-5796449:1:exon
so has part: feature:5803452-5803540:1:exon
so has part: feature:5807065-5807149:1:exon

XP_032902353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5762814-5762870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5774775-5774863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5775652-5775722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5777487-5778740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5784630-5784731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5786690-5786760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5787914-5787999:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5790494-5790554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5792322-5792397:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5792950-5793000:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5796004-5796449:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5803452-5803540:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5807065-5807149:1:exon

pwwp3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pwwp3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PWWP domain-containing DNA repair factor 3A isoform X3
translation: MSDFEFIFCSWQGRMWPARILLKSGISPTETPETNSDCLDVQIICLDKRLRVNRTDTRPFEEEQAKTISSGLVCREHFTHEEALEELTYRKALRIALNILAGNDSYLPPMTIKEPVLAKTELFNSEKLKNNACAFNSNGTQTALKPNGMHLLQEQGRICTRQSSRRASCVKNTPENEQTRTWTRSYTLNQSSINSRSIVEKAEGGRVGKRKRGRVKTDICHPQIDTSKNSSPQYEQPLQPMKSTPEKNRSLGKKCGRLRKEEESSIHACNSTVSGVKKDQNGNVKKGRPKSKFCKSTCEGNTDYFPSNCKSEKVWGSDISCSYLESTPKRGTCGHVGSYKFPLLLSSQRNIPFENKNDLSQTREINQKRKRGKKCAESKECLNASKTSADLDANVKSSNRSNVDSAEEGSPEQHFMSTIFGLPLDGQVSPINGCNQKHTNVDSPQTNCPAAEISKEGTFNASTITKEEGTLSTTLLQTHLGSSLFEIDEVEFSSPDCLSTSQFTEEVMEEEDDENLPSILAHQDQWSVAEGMLVWCKFQKYPYWPAMVRSVKSRIKKASILFVDENIIDVERNKKGFCVSIRTLKPFDCEERHQFTAAARHVYKNAIDWCVALIDDYRIRRGCGSFTGSFVEYCTAELSIPVRKSFEQDPSLMTFPSSSIASQVEGHSNSEYDATPTRQQPTKKLLPDRKKAARDRANEKLVQFIVKARGVEKHLQTVIKGKKHSKWLEEFKTRTRNSSVIDTYLEDDWQVDKVINYLKSVYEMSVGTELLVDCERSRFILDVLLPEAIICAIAEVEQISIKKAEEKYMKGPLHSEREVEHFNKEIEKEMKLKQRHLNEEESRS
SIO_010081: pwwp3a
subclass of: SO_0000673
so part of: pwwp3a
location: join(5762814..5762870,5774775..5774863,5775652..5775722,5777487..5778740,5784633..5784731,5786690..5786760,5787914..5787999,5790494..5790554,5792322..5792397,5792950..5793000,5796004..5796449,5803452..5803540,5807065..5807149)
location: region:5762814-5807149:1
so has part: feature:5762814-5762870:1:exon
so has part: feature:5774775-5774863:1:exon
so has part: feature:5775652-5775722:1:exon
so has part: feature:5777487-5778740:1:exon
so has part: feature:5784633-5784731:1:exon
so has part: feature:5786690-5786760:1:exon
so has part: feature:5787914-5787999:1:exon
so has part: feature:5790494-5790554:1:exon
so has part: feature:5792322-5792397:1:exon
so has part: feature:5792950-5793000:1:exon
so has part: feature:5796004-5796449:1:exon
so has part: feature:5803452-5803540:1:exon
so has part: feature:5807065-5807149:1:exon

XP_032902354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5762814-5762870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5774775-5774863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5775652-5775722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5777487-5778740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5784633-5784731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5786690-5786760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5787914-5787999:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5790494-5790554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5792322-5792397:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5792950-5793000:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5796004-5796449:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5803452-5803540:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5807065-5807149:1:exon

trnaf-gaa
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trnaf-gaa
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(5818371..5818443)
location: region:5818371-5818443:-1
so has part: feature:5818371-5818443:-1:exon
subclass of: SO_0000663

116989777
type: Gene
SIO_000068: ncbigene

position:5818371:-1
position: 5818371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5818443:-1
position: 5818443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5818371-5818443:-1:exon

trnaf-gaa
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 386614
gene: trnaf-gaa
product: tRNA-Phe
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA phenylalanine (anticodon GAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(5818408..5818410),aa:Phe, seq:gaa)
SIO_010081: trnaf-gaa
subclass of: SO_0000673
so part of: trnaf-gaa
location: complement(5818371..5818443)
location: region:5818371-5818443:-1
so has part: feature:5818371-5818443:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5818371-5818443:-1:exon

ndufs7
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ndufs7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5818477..5838135
location: region:5818477-5838135:1
so has part: feature:5818477-5838135:1:exon
subclass of: SO_0000010

116989268
type: Gene
SIO_000068: ncbigene

position:5818477:1
position: 5818477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5838135:1
position: 5838135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5818477-5838135:1:exon

ndufs7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ndufs7
product: NADH:ubiquinone oxidoreductase core subunit S7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033046464.1
SIO_010081: ndufs7
subclass of: SO_0000673
so part of: ndufs7
location: join(5818477..5818661,5825295..5825331,5833815..5833883,5834284..5834401,5835321..5835500,5836393..5836439,5836544..5836632,5837803..5838033)
location: region:5818477-5838033:1
so has part: feature:5818477-5818661:1:exon
so has part: feature:5825295-5825331:1:exon
so has part: feature:5833815-5833883:1:exon
so has part: feature:5834284-5834401:1:exon
so has part: feature:5835321-5835500:1:exon
so has part: feature:5836393-5836439:1:exon
so has part: feature:5836544-5836632:1:exon
so has part: feature:5837803-5838033:1:exon

position:5838033:1
position: 5838033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5818477-5818661:1:exon

position:5818661:1
position: 5818661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5825295-5825331:1:exon

position:5825295:1
position: 5825295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5825331:1
position: 5825331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5833815-5833883:1:exon

position:5833815:1
position: 5833815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5833883:1
position: 5833883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5834284-5834401:1:exon

position:5834284:1
position: 5834284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5834401:1
position: 5834401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5835321-5835500:1:exon

position:5835321:1
position: 5835321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5835500:1
position: 5835500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5836393-5836439:1:exon

position:5836393:1
position: 5836393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5836439:1
position: 5836439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5836544-5836632:1:exon

position:5836544:1
position: 5836544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5836632:1
position: 5836632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5837803-5838033:1:exon

position:5837803:1
position: 5837803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ndufs7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ndufs7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial isoform X1
translation: MMIPDSRWPEKGVGLWTRWPLGLGLGLHAPVYQAAPGPLPTALRLGKFVTFVSRPSSLLANQSRCLHQTTVTENASSSALAKESKAALPTKRFSLPSNKGEYVITKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGIVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKRERRISVWYRK
SIO_010081: ndufs7
subclass of: SO_0000673
so part of: ndufs7
location: join(5818538..5818661,5825295..5825331,5833815..5833883,5834284..5834401,5835321..5835500,5836393..5836439,5836544..5836632,5837803..5837900)
location: region:5818538-5837900:1
so has part: feature:5818538-5818661:1:exon
so has part: feature:5825295-5825331:1:exon
so has part: feature:5833815-5833883:1:exon
so has part: feature:5834284-5834401:1:exon
so has part: feature:5835321-5835500:1:exon
so has part: feature:5836393-5836439:1:exon
so has part: feature:5836544-5836632:1:exon
so has part: feature:5837803-5837900:1:exon

XP_032902355.1
type: Protein
SIO_000068: ncbiprotein

position:5818538:1
position: 5818538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5837900:1
position: 5837900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5818538-5818661:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5825295-5825331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5833815-5833883:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5834284-5834401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5835321-5835500:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5836393-5836439:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5836544-5836632:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5837803-5837900:1:exon

trnan-guu
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trnan-guu
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5818666..5818739
location: region:5818666-5818739:1
so has part: feature:5818666-5818739:1:exon
subclass of: SO_0000663

116989776
type: Gene
SIO_000068: ncbigene

position:5818666:1
position: 5818666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5818739:1
position: 5818739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5818666-5818739:1:exon

trnan-guu
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 386614
gene: trnan-guu
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5818700..5818702,aa:Asn,seq:gtt)
SIO_010081: trnan-guu
subclass of: SO_0000673
so part of: trnan-guu
location: 5818666..5818739
location: region:5818666-5818739:1
so has part: feature:5818666-5818739:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5818666-5818739:1:exon

ndufs7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ndufs7
product: NADH:ubiquinone oxidoreductase core subunit S7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033046465.1
SIO_010081: ndufs7
subclass of: SO_0000673
so part of: ndufs7
location: join(5818890..5818965,5825295..5825331,5833815..5833883,5834284..5834401,5835321..5835500,5836393..5836439,5836544..5836632,5837803..5838135)
location: region:5818890-5838135:1
so has part: feature:5818890-5818965:1:exon
so has part: feature:5825295-5825331:1:exon
so has part: feature:5833815-5833883:1:exon
so has part: feature:5834284-5834401:1:exon
so has part: feature:5835321-5835500:1:exon
so has part: feature:5836393-5836439:1:exon
so has part: feature:5836544-5836632:1:exon
so has part: feature:5837803-5838135:1:exon

position:5818890:1
position: 5818890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5818890-5818965:1:exon

position:5818965:1
position: 5818965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5825295-5825331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5833815-5833883:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5834284-5834401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5835321-5835500:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5836393-5836439:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5836544-5836632:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5837803-5838135:1:exon

ndufs7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ndufs7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial isoform X2
translation: MAALKLGALRLGKFVTFVSRPSSLLANQSRCLHQTTVTENASSSALAKESKAALPTKRFSLPSNKGEYVITKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGIVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKRERRISVWYRK
SIO_010081: ndufs7
subclass of: SO_0000673
so part of: ndufs7
location: join(5818944..5818965,5825295..5825331,5833815..5833883,5834284..5834401,5835321..5835500,5836393..5836439,5836544..5836632,5837803..5837900)
location: region:5818944-5837900:1
so has part: feature:5818944-5818965:1:exon
so has part: feature:5825295-5825331:1:exon
so has part: feature:5833815-5833883:1:exon
so has part: feature:5834284-5834401:1:exon
so has part: feature:5835321-5835500:1:exon
so has part: feature:5836393-5836439:1:exon
so has part: feature:5836544-5836632:1:exon
so has part: feature:5837803-5837900:1:exon

XP_032902356.1
type: Protein
SIO_000068: ncbiprotein

position:5818944:1
position: 5818944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5818944-5818965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5825295-5825331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5833815-5833883:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5834284-5834401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5835321-5835500:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5836393-5836439:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5836544-5836632:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5837803-5837900:1:exon

gamt
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: gamt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5839203..5860423)
location: region:5839203-5860423:-1
so has part: feature:5839203-5860423:-1:exon
subclass of: SO_0000010

116989269
type: Gene
SIO_000068: ncbigene

position:5839203:-1
position: 5839203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5860423:-1
position: 5860423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5839203-5860423:-1:exon

gamt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gamt
product: guanidinoacetate N-methyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033046466.1
SIO_010081: gamt
subclass of: SO_0000673
so part of: gamt
location: complement(join(5839203..5839983,5843548..5843658,5846998..5847065,5853424..5853487,5855237..5855382,5860143..5860423))
location: region:5839203-5860423:-1
so has part: feature:5860143-5860423:-1:exon
so has part: feature:5855237-5855382:-1:exon
so has part: feature:5853424-5853487:-1:exon
so has part: feature:5846998-5847065:-1:exon
so has part: feature:5843548-5843658:-1:exon
so has part: feature:5839203-5839983:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5860143-5860423:-1:exon

position:5860143:-1
position: 5860143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5855237-5855382:-1:exon

position:5855237:-1
position: 5855237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5855382:-1
position: 5855382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5853424-5853487:-1:exon

position:5853424:-1
position: 5853424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5853487:-1
position: 5853487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5846998-5847065:-1:exon

position:5846998:-1
position: 5846998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5847065:-1
position: 5847065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5843548-5843658:-1:exon

position:5843548:-1
position: 5843548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5843658:-1
position: 5843658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5839203-5839983:-1:exon

position:5839983:-1
position: 5839983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gamt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gamt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanidinoacetate N-methyltransferase
translation: MSVEIKTPIFSQGEDCKTDWRLAHAEYDESDAHLEILGKPVMERWETPFMHSLAVAAASKGGRVLEIGFGMAIAATKIESLNIDEHWIIECNEGVFKRLEEWTKEQPHKIVPLKGLWEDVIPTLPDSHFDGILYDTYPLSEETWHVHQFAFIKEHALRLLKPGGVLTYCNLTSWGELLKGKYDDIEKMFQETQVFHLVEAGFKKENIKTTVMNITPPKDCRYYSFTKMITPLVTKD
SIO_010081: gamt
subclass of: SO_0000673
so part of: gamt
location: complement(join(5839843..5839983,5843548..5843658,5846998..5847065,5853424..5853487,5855237..5855382,5860143..5860323))
location: region:5839843-5860323:-1
so has part: feature:5860143-5860323:-1:exon
so has part: feature:5855237-5855382:-1:exon
so has part: feature:5853424-5853487:-1:exon
so has part: feature:5846998-5847065:-1:exon
so has part: feature:5843548-5843658:-1:exon
so has part: feature:5839843-5839983:-1:exon

XP_032902357.1
type: Protein
SIO_000068: ncbiprotein

position:5839843:-1
position: 5839843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5860323:-1
position: 5860323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5860143-5860323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5855237-5855382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5853424-5853487:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5846998-5847065:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5843548-5843658:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5839843-5839983:-1:exon

LOC116989734
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5871400..5875023)
location: region:5871400-5875023:-1
so has part: feature:5871400-5875023:-1:exon
subclass of: SO_0000011

116989734
type: Gene
SIO_000068: ncbigene

position:5871400:-1
position: 5871400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5875023:-1
position: 5875023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5871400-5875023:-1:exon

LOC116989734
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989734
product: uncharacterized LOC116989734
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416303.1
SIO_010081: LOC116989734
subclass of: SO_0000673
so part of: LOC116989734
location: complement(join(5871400..5871502,5874184..5874189,5875004..5875023))
location: region:5871400-5875023:-1
so has part: feature:5875004-5875023:-1:exon
so has part: feature:5874184-5874189:-1:exon
so has part: feature:5871400-5871502:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5875004-5875023:-1:exon

position:5875004:-1
position: 5875004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5874184-5874189:-1:exon

position:5874184:-1
position: 5874184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5874189:-1
position: 5874189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5871400-5871502:-1:exon

position:5871502:-1
position: 5871502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dazap1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: dazap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5876452..5901264
location: region:5876452-5901264:1
so has part: feature:5876452-5901264:1:exon
subclass of: SO_0000010

116989270
type: Gene
SIO_000068: ncbigene

position:5876452:1
position: 5876452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5901264:1
position: 5901264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5876452-5901264:1:exon

dazap1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dazap1
product: DAZ associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033046468.1
SIO_010081: dazap1
subclass of: SO_0000673
so part of: dazap1
location: join(5876452..5876755,5880006..5880046,5880805..5880971,5881800..5881874,5882448..5882558,5883699..5883747,5889109..5889191,5893539..5893695,5897362..5897391,5897504..5897653,5898813..5898986,5900221..5900313,5900572..5901264)
location: region:5876452-5901264:1
so has part: feature:5876452-5876755:1:exon
so has part: feature:5880006-5880046:1:exon
so has part: feature:5880805-5880971:1:exon
so has part: feature:5881800-5881874:1:exon
so has part: feature:5882448-5882558:1:exon
so has part: feature:5883699-5883747:1:exon
so has part: feature:5889109-5889191:1:exon
so has part: feature:5893539-5893695:1:exon
so has part: feature:5897362-5897391:1:exon
so has part: feature:5897504-5897653:1:exon
so has part: feature:5898813-5898986:1:exon
so has part: feature:5900221-5900313:1:exon
so has part: feature:5900572-5901264:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5876452-5876755:1:exon

position:5876755:1
position: 5876755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5880006-5880046:1:exon

position:5880006:1
position: 5880006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5880046:1
position: 5880046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5880805-5880971:1:exon

position:5880805:1
position: 5880805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5880971:1
position: 5880971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5881800-5881874:1:exon

position:5881800:1
position: 5881800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5881874:1
position: 5881874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5882448-5882558:1:exon

position:5882448:1
position: 5882448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5882558:1
position: 5882558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5883699-5883747:1:exon

position:5883699:1
position: 5883699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5883747:1
position: 5883747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5889109-5889191:1:exon

position:5889109:1
position: 5889109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5889191:1
position: 5889191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5893539-5893695:1:exon

position:5893539:1
position: 5893539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5893695:1
position: 5893695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5897362-5897391:1:exon

position:5897362:1
position: 5897362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5897391:1
position: 5897391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5897504-5897653:1:exon

position:5897504:1
position: 5897504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5897653:1
position: 5897653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5898813-5898986:1:exon

position:5898813:1
position: 5898813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5898986:1
position: 5898986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5900221-5900313:1:exon

position:5900221:1
position: 5900221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5900313:1
position: 5900313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5900572-5901264:1:exon

position:5900572:1
position: 5900572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dazap1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dazap1
product: DAZ associated protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033046470.1
SIO_010081: dazap1
subclass of: SO_0000673
so part of: dazap1
location: join(5876452..5876755,5880006..5880046,5880805..5880971,5881800..5881874,5882448..5882558,5883699..5883747,5889109..5889191,5893539..5893695,5897362..5897391,5897504..5897653,5900221..5900313,5900572..5901264)
location: region:5876452-5901264:1
so has part: feature:5876452-5876755:1:exon
so has part: feature:5880006-5880046:1:exon
so has part: feature:5880805-5880971:1:exon
so has part: feature:5881800-5881874:1:exon
so has part: feature:5882448-5882558:1:exon
so has part: feature:5883699-5883747:1:exon
so has part: feature:5889109-5889191:1:exon
so has part: feature:5893539-5893695:1:exon
so has part: feature:5897362-5897391:1:exon
so has part: feature:5897504-5897653:1:exon
so has part: feature:5900221-5900313:1:exon
so has part: feature:5900572-5901264:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5876452-5876755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5880006-5880046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5880805-5880971:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5881800-5881874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5882448-5882558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5883699-5883747:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5889109-5889191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5893539-5893695:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5897362-5897391:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5897504-5897653:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5900221-5900313:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5900572-5901264:1:exon

dazap1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dazap1
product: DAZ associated protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033046471.1
SIO_010081: dazap1
subclass of: SO_0000673
so part of: dazap1
location: join(5876453..5876755,5880006..5880046,5880805..5880971,5881800..5881874,5882448..5882558,5883699..5883747,5889109..5889191,5893539..5893695,5897362..5897391,5897504..5897653,5900572..5901264)
location: region:5876453-5901264:1
so has part: feature:5876453-5876755:1:exon
so has part: feature:5880006-5880046:1:exon
so has part: feature:5880805-5880971:1:exon
so has part: feature:5881800-5881874:1:exon
so has part: feature:5882448-5882558:1:exon
so has part: feature:5883699-5883747:1:exon
so has part: feature:5889109-5889191:1:exon
so has part: feature:5893539-5893695:1:exon
so has part: feature:5897362-5897391:1:exon
so has part: feature:5897504-5897653:1:exon
so has part: feature:5900572-5901264:1:exon

position:5876453:1
position: 5876453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5876453-5876755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5880006-5880046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5880805-5880971:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5881800-5881874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5882448-5882558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5883699-5883747:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5889109-5889191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5893539-5893695:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5897362-5897391:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5897504-5897653:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5900572-5901264:1:exon

dazap1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dazap1
product: DAZ associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033046469.1
SIO_010081: dazap1
subclass of: SO_0000673
so part of: dazap1
location: join(5876457..5876755,5880006..5880046,5880805..5880971,5881800..5881874,5882448..5882558,5883699..5883747,5889109..5889191,5893539..5893695,5897362..5897391,5897504..5897653,5898813..5898986,5900572..5901112)
location: region:5876457-5901112:1
so has part: feature:5876457-5876755:1:exon
so has part: feature:5880006-5880046:1:exon
so has part: feature:5880805-5880971:1:exon
so has part: feature:5881800-5881874:1:exon
so has part: feature:5882448-5882558:1:exon
so has part: feature:5883699-5883747:1:exon
so has part: feature:5889109-5889191:1:exon
so has part: feature:5893539-5893695:1:exon
so has part: feature:5897362-5897391:1:exon
so has part: feature:5897504-5897653:1:exon
so has part: feature:5898813-5898986:1:exon
so has part: feature:5900572-5901112:1:exon

position:5876457:1
position: 5876457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5901112:1
position: 5901112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5876457-5876755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5880006-5880046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5880805-5880971:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5881800-5881874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5882448-5882558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5883699-5883747:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5889109-5889191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5893539-5893695:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5897362-5897391:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5897504-5897653:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5898813-5898986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5900572-5901112:1:exon

dazap1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dazap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DAZ-associated protein 1 isoform X1
translation: MNNQGGDEIGKLFVGGLDWNTTQETLRDYFSQYGEVVDCVIMKDKMTNQSRGFGFVKFKDPNCVGTVLASRPHNLDGRTIDPKPCTPRSMQQEKPKPKEGGGWGKSSQNQSSNKSKKVFVGGIPHNCSETELRDYFKRFGVVSEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHYHDIMGKKVEVKRAEPRDSKTPGSGQSGAPQWTRSLPNAANGWGGQPSQGWQQQSYGSPQGMWMAPGQPMGGYGPPPPPGGRGAPPQPPHFNPYVVPQPPPGGFAPPQGFGQGFGAPPQYGYGGFGAPPTDQFGPPGIPAPPATPGAGQMGYPPATQTPQDMSKPPAGQPEFSGYNQYGMGNYPQDPSGYGPTRPSQTYGQAEQGYSAAGYGQDMSGFGQAPSFSDPNQPAPSYGGPSAPAPPGAPPSAPGGFARGQNHNAQGFHPYRR
SIO_010081: dazap1
subclass of: SO_0000673
so part of: dazap1
location: join(5876727..5876755,5880006..5880046,5880805..5880971,5881800..5881874,5882448..5882558,5883699..5883747,5889109..5889191,5893539..5893695,5897362..5897391,5897504..5897653,5898813..5898986,5900221..5900313,5900572..5900753)
location: region:5876727-5900753:1
so has part: feature:5876727-5876755:1:exon
so has part: feature:5880006-5880046:1:exon
so has part: feature:5880805-5880971:1:exon
so has part: feature:5881800-5881874:1:exon
so has part: feature:5882448-5882558:1:exon
so has part: feature:5883699-5883747:1:exon
so has part: feature:5889109-5889191:1:exon
so has part: feature:5893539-5893695:1:exon
so has part: feature:5897362-5897391:1:exon
so has part: feature:5897504-5897653:1:exon
so has part: feature:5898813-5898986:1:exon
so has part: feature:5900221-5900313:1:exon
so has part: feature:5900572-5900753:1:exon

XP_032902359.1
type: Protein
SIO_000068: ncbiprotein

position:5876727:1
position: 5876727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5900753:1
position: 5900753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5876727-5876755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5880006-5880046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5880805-5880971:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5881800-5881874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5882448-5882558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5883699-5883747:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5889109-5889191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5893539-5893695:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5897362-5897391:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5897504-5897653:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5898813-5898986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5900221-5900313:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5900572-5900753:1:exon

dazap1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dazap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DAZ-associated protein 1 isoform X2
translation: MNNQGGDEIGKLFVGGLDWNTTQETLRDYFSQYGEVVDCVIMKDKMTNQSRGFGFVKFKDPNCVGTVLASRPHNLDGRTIDPKPCTPRSMQQEKPKPKEGGGWGKSSQNQSSNKSKKVFVGGIPHNCSETELRDYFKRFGVVSEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHYHDIMGKKVEVKRAEPRDSKTPGSGQSGAPQWTRSLPNAANGWGGQPSQGWQQQSYGSPQGMWMAPGQPMGGYGPPPPPGGRGAPPQPPHFNPYVVPQPPPGGFAPPQGFGQGFGAPPQYGYGGFGAPPTDQFGPPGIPAPPATPGAGQMGYPPATQTPQDMSKPPAGQPEFSGYNQYGYGQDMSGFGQAPSFSDPNQPAPSYGGPSAPAPPGAPPSAPGGFARGQNHNAQGFHPYRR
SIO_010081: dazap1
subclass of: SO_0000673
so part of: dazap1
location: join(5876727..5876755,5880006..5880046,5880805..5880971,5881800..5881874,5882448..5882558,5883699..5883747,5889109..5889191,5893539..5893695,5897362..5897391,5897504..5897653,5898813..5898986,5900572..5900753)
location: region:5876727-5900753:1
so has part: feature:5876727-5876755:1:exon
so has part: feature:5880006-5880046:1:exon
so has part: feature:5880805-5880971:1:exon
so has part: feature:5881800-5881874:1:exon
so has part: feature:5882448-5882558:1:exon
so has part: feature:5883699-5883747:1:exon
so has part: feature:5889109-5889191:1:exon
so has part: feature:5893539-5893695:1:exon
so has part: feature:5897362-5897391:1:exon
so has part: feature:5897504-5897653:1:exon
so has part: feature:5898813-5898986:1:exon
so has part: feature:5900572-5900753:1:exon

XP_032902360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5876727-5876755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5880006-5880046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5880805-5880971:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5881800-5881874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5882448-5882558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5883699-5883747:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5889109-5889191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5893539-5893695:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5897362-5897391:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5897504-5897653:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5898813-5898986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5900572-5900753:1:exon

dazap1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dazap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DAZ-associated protein 1 isoform X3
translation: MNNQGGDEIGKLFVGGLDWNTTQETLRDYFSQYGEVVDCVIMKDKMTNQSRGFGFVKFKDPNCVGTVLASRPHNLDGRTIDPKPCTPRSMQQEKPKPKEGGGWGKSSQNQSSNKSKKVFVGGIPHNCSETELRDYFKRFGVVSEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHYHDIMGKKVEVKRAEPRDSKTPGSGQSGAPQWTRSLPNAANGWGGQPSQGWQQQSYGSPQGMWMAPGQPMGGYGPPPPPGGRGAPPQPPHFNPYVVPQPPPGGFAPPQGFGQGFGAPPQYGMGNYPQDPSGYGPTRPSQTYGQAEQGYSAAGYGQDMSGFGQAPSFSDPNQPAPSYGGPSAPAPPGAPPSAPGGFARGQNHNAQGFHPYRR
SIO_010081: dazap1
subclass of: SO_0000673
so part of: dazap1
location: join(5876727..5876755,5880006..5880046,5880805..5880971,5881800..5881874,5882448..5882558,5883699..5883747,5889109..5889191,5893539..5893695,5897362..5897391,5897504..5897653,5900221..5900313,5900572..5900753)
location: region:5876727-5900753:1
so has part: feature:5876727-5876755:1:exon
so has part: feature:5880006-5880046:1:exon
so has part: feature:5880805-5880971:1:exon
so has part: feature:5881800-5881874:1:exon
so has part: feature:5882448-5882558:1:exon
so has part: feature:5883699-5883747:1:exon
so has part: feature:5889109-5889191:1:exon
so has part: feature:5893539-5893695:1:exon
so has part: feature:5897362-5897391:1:exon
so has part: feature:5897504-5897653:1:exon
so has part: feature:5900221-5900313:1:exon
so has part: feature:5900572-5900753:1:exon

XP_032902361.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5876727-5876755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5880006-5880046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5880805-5880971:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5881800-5881874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5882448-5882558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5883699-5883747:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5889109-5889191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5893539-5893695:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5897362-5897391:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5897504-5897653:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5900221-5900313:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5900572-5900753:1:exon

dazap1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dazap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DAZ-associated protein 1 isoform X4
translation: MNNQGGDEIGKLFVGGLDWNTTQETLRDYFSQYGEVVDCVIMKDKMTNQSRGFGFVKFKDPNCVGTVLASRPHNLDGRTIDPKPCTPRSMQQEKPKPKEGGGWGKSSQNQSSNKSKKVFVGGIPHNCSETELRDYFKRFGVVSEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHYHDIMGKKVEVKRAEPRDSKTPGSGQSGAPQWTRSLPNAANGWGGQPSQGWQQQSYGSPQGMWMAPGQPMGGYGPPPPPGGRGAPPQPPHFNPYVVPQPPPGGFAPPQGFGQGFGAPPQYGYGQDMSGFGQAPSFSDPNQPAPSYGGPSAPAPPGAPPSAPGGFARGQNHNAQGFHPYRR
SIO_010081: dazap1
subclass of: SO_0000673
so part of: dazap1
location: join(5876727..5876755,5880006..5880046,5880805..5880971,5881800..5881874,5882448..5882558,5883699..5883747,5889109..5889191,5893539..5893695,5897362..5897391,5897504..5897653,5900572..5900753)
location: region:5876727-5900753:1
so has part: feature:5876727-5876755:1:exon
so has part: feature:5880006-5880046:1:exon
so has part: feature:5880805-5880971:1:exon
so has part: feature:5881800-5881874:1:exon
so has part: feature:5882448-5882558:1:exon
so has part: feature:5883699-5883747:1:exon
so has part: feature:5889109-5889191:1:exon
so has part: feature:5893539-5893695:1:exon
so has part: feature:5897362-5897391:1:exon
so has part: feature:5897504-5897653:1:exon
so has part: feature:5900572-5900753:1:exon

XP_032902362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5876727-5876755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5880006-5880046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5880805-5880971:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5881800-5881874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5882448-5882558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5883699-5883747:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5889109-5889191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5893539-5893695:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5897362-5897391:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5897504-5897653:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5900572-5900753:1:exon

rps15
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rps15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5919968..5927984
location: region:5919968-5927984:1
so has part: feature:5919968-5927984:1:exon
subclass of: SO_0000010

116989272
type: Gene
SIO_000068: ncbigene

position:5919968:1
position: 5919968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5927984:1
position: 5927984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5919968-5927984:1:exon

rps15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rps15
product: ribosomal protein S15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_033046473.1
SIO_010081: rps15
subclass of: SO_0000673
so part of: rps15
location: join(5919968..5920041,5921854..5921942,5923678..5923912,5927825..5927984)
location: region:5919968-5927984:1
so has part: feature:5919968-5920041:1:exon
so has part: feature:5921854-5921942:1:exon
so has part: feature:5923678-5923912:1:exon
so has part: feature:5927825-5927984:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5919968-5920041:1:exon

position:5920041:1
position: 5920041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5921854-5921942:1:exon

position:5921854:1
position: 5921854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5921942:1
position: 5921942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5923678-5923912:1:exon

position:5923678:1
position: 5923678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5923912:1
position: 5923912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5927825-5927984:1:exon

position:5927825:1
position: 5927825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rps15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rps15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S15
translation: MADPVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYCARQRRRVNRGLRRKQQSLLKRLRKAKKEAPPMEKPEVVKTHLRDMVILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK
SIO_010081: rps15
subclass of: SO_0000673
so part of: rps15
location: join(5920039..5920041,5921854..5921942,5923678..5923912,5927825..5927938)
location: region:5920039-5927938:1
so has part: feature:5920039-5920041:1:exon
so has part: feature:5921854-5921942:1:exon
so has part: feature:5923678-5923912:1:exon
so has part: feature:5927825-5927938:1:exon

XP_032902364.1
type: Protein
SIO_000068: ncbiprotein

position:5920039:1
position: 5920039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5927938:1
position: 5927938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5920039-5920041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5921854-5921942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5923678-5923912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5927825-5927938:1:exon

LOC116989770
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989770
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5922868..5923002
location: region:5922868-5923002:1
so has part: feature:5922868-5923002:1:exon
subclass of: SO_0000578

116989770
type: Gene
SIO_000068: ncbigene

position:5922868:1
position: 5922868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5923002:1
position: 5923002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5922868-5923002:1:exon

LOC116989770
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snoRNA
gene: LOC116989770
product: small nucleolar RNA SNORA13
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00396
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004416319.1
SIO_010081: LOC116989770
subclass of: SO_0000673
so part of: LOC116989770
location: 5922868..5923002
location: region:5922868-5923002:1
so has part: feature:5922868-5923002:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5922868-5923002:1:exon

LOC116989769
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989769
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5925986..5926118
location: region:5925986-5926118:1
so has part: feature:5925986-5926118:1:exon
subclass of: SO_0000578

116989769
type: Gene
SIO_000068: ncbigene

position:5925986:1
position: 5925986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5926118:1
position: 5926118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5925986-5926118:1:exon

LOC116989769
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snoRNA
gene: LOC116989769
product: small nucleolar RNA SNORA13
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00396
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004416318.1
SIO_010081: LOC116989769
subclass of: SO_0000673
so part of: LOC116989769
location: 5925986..5926118
location: region:5925986-5926118:1
so has part: feature:5925986-5926118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5925986-5926118:1:exon

LOC116989271
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5934716..5939775)
location: region:5934716-5939775:-1
so has part: feature:5934716-5939775:-1:exon
subclass of: SO_0000010

116989271
type: Gene
SIO_000068: ncbigene

position:5934716:-1
position: 5934716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5939775:-1
position: 5939775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5934716-5939775:-1:exon

LOC116989271
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989271
product: gap junction beta-2 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033046472.1
SIO_010081: LOC116989271
subclass of: SO_0000673
so part of: LOC116989271
location: complement(join(5934716..5935514,5939628..5939775))
location: region:5934716-5939775:-1
so has part: feature:5939628-5939775:-1:exon
so has part: feature:5934716-5935514:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5939628-5939775:-1:exon

position:5939628:-1
position: 5939628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5934716-5935514:-1:exon

position:5935514:-1
position: 5935514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989271
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-2 protein-like
translation: MESDIEMIFTLLSGSQPPAPFYVKSSLALLFVVRLIIMIVTAKTTWNDDLGDLICNSTRTGCRYECYNSYSIISPFNLFALQLIFIISLLIAVASLQNLSQTRDISRSPANSYCMLARMIIEGAFLVLWLAIYHGLLRQPNFKCDTNPCEQIVVCTMLQNQQKNAFVVVMYICSLACLFICATEKNILMTQVVFFKSSSKIQNIRNSQYI
SIO_010081: LOC116989271
subclass of: SO_0000673
so part of: LOC116989271
location: complement(5934860..5935492)
location: region:5934860-5935492:-1
so has part: feature:5934860-5935492:-1:exon

XP_032902363.1
type: Protein
SIO_000068: ncbiprotein

position:5934860:-1
position: 5934860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5935492:-1
position: 5935492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5934860-5935492:-1:exon

apc2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: apc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5949961..6149230
location: region:5949961-6149230:1
so has part: feature:5949961-6149230:1:exon
subclass of: SO_0000010

116989273
type: Gene
SIO_000068: ncbigene

position:5949961:1
position: 5949961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6149230:1
position: 6149230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5949961-6149230:1:exon

apc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: apc2
product: APC regulator of WNT signaling pathway 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033046474.1
SIO_010081: apc2
subclass of: SO_0000673
so part of: apc2
location: join(5949961..5950084,6017790..6017948,6047333..6047423,6060189..6060381,6063370..6063478,6070084..6070197,6082660..6082737,6123872..6123952,6125369..6125744,6128260..6128355,6131587..6131726,6135784..6135861,6137853..6137969,6140247..6140461,6142537..6149230)
location: region:5949961-6149230:1
so has part: feature:5949961-5950084:1:exon
so has part: feature:6017790-6017948:1:exon
so has part: feature:6047333-6047423:1:exon
so has part: feature:6060189-6060381:1:exon
so has part: feature:6063370-6063478:1:exon
so has part: feature:6070084-6070197:1:exon
so has part: feature:6082660-6082737:1:exon
so has part: feature:6123872-6123952:1:exon
so has part: feature:6125369-6125744:1:exon
so has part: feature:6128260-6128355:1:exon
so has part: feature:6131587-6131726:1:exon
so has part: feature:6135784-6135861:1:exon
so has part: feature:6137853-6137969:1:exon
so has part: feature:6140247-6140461:1:exon
so has part: feature:6142537-6149230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5949961-5950084:1:exon

position:5950084:1
position: 5950084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6017790-6017948:1:exon

position:6017790:1
position: 6017790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6017948:1
position: 6017948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6047333-6047423:1:exon

position:6047333:1
position: 6047333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6047423:1
position: 6047423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6060189-6060381:1:exon

position:6060189:1
position: 6060189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6060381:1
position: 6060381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6063370-6063478:1:exon

position:6063370:1
position: 6063370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6063478:1
position: 6063478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6070084-6070197:1:exon

position:6070084:1
position: 6070084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6070197:1
position: 6070197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6082660-6082737:1:exon

position:6082660:1
position: 6082660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6082737:1
position: 6082737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6123872-6123952:1:exon

position:6123872:1
position: 6123872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6123952:1
position: 6123952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6125369-6125744:1:exon

position:6125369:1
position: 6125369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6125744:1
position: 6125744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6128260-6128355:1:exon

position:6128260:1
position: 6128260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6128355:1
position: 6128355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6131587-6131726:1:exon

position:6131587:1
position: 6131587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6131726:1
position: 6131726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6135784-6135861:1:exon

position:6135784:1
position: 6135784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6135861:1
position: 6135861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6137853-6137969:1:exon

position:6137853:1
position: 6137853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6137969:1
position: 6137969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6140247-6140461:1:exon

position:6140247:1
position: 6140247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6140461:1
position: 6140461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6142537-6149230:1:exon

position:6142537:1
position: 6142537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

apc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: apc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenomatous polyposis coli protein 2 isoform X1
translation: MGLLWLLSFLHSSLFGDEVLEELRMSGSTSSYDHLVKQVEVLRKENSHLRRELEDNSSHLTKLETETSDMKEMLKQLQNKLEQEAGNLVSTGRSDILDQLKELNTDIASLCDNKWQSNMVCTGPGRFTLDQTFERNQVHPTTLLAQDYVPGTHRRLEHLEELNEERALLLSEIEKEEKEKAFYCAQIHNLGKRADEMLQIRSVSKHMDLIRQQLQYEAHQIKAIIEERYGTGDNTTERLQMRMNRVQEIEKEILQSQQRVRETETEGRGQSNDQDAEDRMNNLPQGLNNLGSKVEMVFWLLSMLATRDKEDMSRTLLAMSSSQDSCVAMRKSGCLPLLIQLLHDSEREAAGSAVDGGTKEARARASAALHNIVYSQPDEGQAKREMRVLHVLEQVRLYCDSCWEWLDNRGENGTDTNSLPLPIEPQICQAMCAIMKLSFDEEYRRAMNELGGLQAVAELLQVDCDMYGATSDPLNSALRRYAGMALTNLTFGDVVNKATLCSRKGCMQSIVAQLESNSEDIHQVVASILRNLSWRADVNSKRILREVASVTALMQCALKAKKESTLKSLLSALWNLSAHSTENKVAICSVDGALIFLVGTLTYKCQSNSLAIIESGGGILRNVSSLIATNEEYRQVLRDYNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNAKDQELLWDMGAVSMLRNLIHSKHKMIAMGSAAALRNLLTNRPAKYKDTAMISPGSCMPSLYMRKQKALEAELDAKHLSETFDSIEKLSPKHSNINKPLRHIESLAKDYASDSGCFDDDEGPNISTGLETGGLSMLSMYLNSSFLQGQGFSRCRSAGRSSKSERDLDGMQVDLQKFNPSTDNVSIAAERLVNQISTTVARIDKIVEDMSHMHTSSEDSFSLSSEDQCIDWQSALDDLNEPRTKSSSPRHLADAVSSGIRVKAQGLLGARTDDANLSSDSLECGNSTEQDTKSQMSSSKESSSSGQKEELPLYQKRPNNLVLKNGENHQMDRKESDGQPRSREPRTSWNDAWGVRKVDEISKSQFSPFYERSQVASITTRSSPSPSPGNSLTPQSLTSRKQAWVHSGLSQSNRDLSQGLSSTSACTPGSNGQETLQTYCVEDTPICFSRCSSLSSLSSAENALDVQIGSENDVDSDSSLEIIGVEKESPLTAEKTISDESLGSEEMLLKSSDHSFSSTSQPIEIPCPKQEKFLMRKRAASRNMDSSPSSLSDNYLQETPLVLSRCSSVSSLRSFESPSIVSSIQSDPCSEMVSGTISPSDLPDSPGQTMPPSRSKTPLLDHLDKDANQANNQWDSEMKKHMDINEFKERFQLPADIDTMLYFTLEKPNENFSCASSLSALTLHEPYIQKDIELKLMPLLQEKSCFNCLAQEKREDMREERTADGMEKADKLDCILENSDDDIEILKECINSAMPTKFRKVISGLSGQVLQSKKSLQLPVYMLLPAHSQLESGGHTVAKNDNFREDSSYSDSVEGTPVNFSSSASLSDETLEYPQRDSPSVAKVRPEITERRELIPAEGQNTDDLEVPISIRMHEKSLEHGNKYHFNINEVCPHSSSIPRGQSHLLINVNQREVQKLNQNPLPPQQCQNHNDPVFQSGLTANILRKEHAAPRQLVKPDKMGCKRAEEGEQRMEVSGGEYIHGSYAFQSMRHTTPTEEAVYCFYENDTLDRLSVSKDSVKQKNGVKSDYEENLVITQHGEAMNEPNENYKTTMKFKTAKMERSLITDESPLCSLSSSLSSLSDVELEEFQTKTRKAFVKSRKKSANSSAASKSFTQGYSSTPTTRDSSPSSPSYDSEDDLLQKCISSAMPKKRKHSSKQKSEKSAKQSCQNGNSQPHAGANVSWDLPQRNDGSGDVCSSLSDLSSPDVESFEWKAIQEGANSIVTSLHQAAACLSREPSSESDSILSFVSGLSVGSTLHFTIERKDKKRTQKEQPRDLEAAEHVAKEGKKLTEHKATAGKPSNANRGSNIPKQPSRAVSLPVIFRGRTVIY…
SIO_010081: apc2
subclass of: SO_0000673
so part of: apc2
location: join(5950031..5950084,6017790..6017948,6047333..6047423,6060189..6060381,6063370..6063478,6070084..6070197,6082660..6082737,6123872..6123952,6125369..6125744,6128260..6128355,6131587..6131726,6135784..6135861,6137853..6137969,6140247..6140461,6142537..6148321)
location: region:5950031-6148321:1
so has part: feature:5950031-5950084:1:exon
so has part: feature:6017790-6017948:1:exon
so has part: feature:6047333-6047423:1:exon
so has part: feature:6060189-6060381:1:exon
so has part: feature:6063370-6063478:1:exon
so has part: feature:6070084-6070197:1:exon
so has part: feature:6082660-6082737:1:exon
so has part: feature:6123872-6123952:1:exon
so has part: feature:6125369-6125744:1:exon
so has part: feature:6128260-6128355:1:exon
so has part: feature:6131587-6131726:1:exon
so has part: feature:6135784-6135861:1:exon
so has part: feature:6137853-6137969:1:exon
so has part: feature:6140247-6140461:1:exon
so has part: feature:6142537-6148321:1:exon

XP_032902365.1
type: Protein
SIO_000068: ncbiprotein

position:5950031:1
position: 5950031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6148321:1
position: 6148321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5950031-5950084:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6017790-6017948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6047333-6047423:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6060189-6060381:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6063370-6063478:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6070084-6070197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6082660-6082737:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6123872-6123952:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6125369-6125744:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6128260-6128355:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6131587-6131726:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6135784-6135861:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6137853-6137969:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6140247-6140461:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6142537-6148321:1:exon

LOC116989274
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6065546..6078481)
location: region:6065546-6078481:-1
so has part: feature:6065546-6078481:-1:exon
subclass of: SO_0000011

116989274
type: Gene
SIO_000068: ncbigene

position:6065546:-1
position: 6065546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6078481:-1
position: 6078481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6065546-6078481:-1:exon

LOC116989274
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989274
product: uncharacterized LOC116989274
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004416203.1
SIO_010081: LOC116989274
subclass of: SO_0000673
so part of: LOC116989274
location: complement(join(6065546..6065582,6073463..6073464,6078472..6078481))
location: region:6065546-6078481:-1
so has part: feature:6078472-6078481:-1:exon
so has part: feature:6073463-6073464:-1:exon
so has part: feature:6065546-6065582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6078472-6078481:-1:exon

position:6078472:-1
position: 6078472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6073463-6073464:-1:exon

position:6073463:-1
position: 6073463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6073464:-1
position: 6073464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6065546-6065582:-1:exon

position:6065582:-1
position: 6065582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

apc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: apc2
product: APC regulator of WNT signaling pathway 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033046475.1
SIO_010081: apc2
subclass of: SO_0000673
so part of: apc2
location: join(6101050..6101411,6123872..6123952,6125369..6125744,6128260..6128355,6131587..6131726,6135784..6135861,6137853..6137969,6140247..6140461,6142537..6149230)
location: region:6101050-6149230:1
so has part: feature:6101050-6101411:1:exon
so has part: feature:6123872-6123952:1:exon
so has part: feature:6125369-6125744:1:exon
so has part: feature:6128260-6128355:1:exon
so has part: feature:6131587-6131726:1:exon
so has part: feature:6135784-6135861:1:exon
so has part: feature:6137853-6137969:1:exon
so has part: feature:6140247-6140461:1:exon
so has part: feature:6142537-6149230:1:exon

position:6101050:1
position: 6101050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6101050-6101411:1:exon

position:6101411:1
position: 6101411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6123872-6123952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6125369-6125744:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6128260-6128355:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6131587-6131726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6135784-6135861:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6137853-6137969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6140247-6140461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6142537-6149230:1:exon

apc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: apc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenomatous polyposis coli protein 2 isoform X2
translation: MSESIARSHEGSQGRGQSNDQDAEDRMNNLPQGLNNLGSKVEMVFWLLSMLATRDKEDMSRTLLAMSSSQDSCVAMRKSGCLPLLIQLLHDSEREAAGSAVDGGTKEARARASAALHNIVYSQPDEGQAKREMRVLHVLEQVRLYCDSCWEWLDNRGENGTDTNSLPLPIEPQICQAMCAIMKLSFDEEYRRAMNELGGLQAVAELLQVDCDMYGATSDPLNSALRRYAGMALTNLTFGDVVNKATLCSRKGCMQSIVAQLESNSEDIHQVVASILRNLSWRADVNSKRILREVASVTALMQCALKAKKESTLKSLLSALWNLSAHSTENKVAICSVDGALIFLVGTLTYKCQSNSLAIIESGGGILRNVSSLIATNEEYRQVLRDYNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNAKDQELLWDMGAVSMLRNLIHSKHKMIAMGSAAALRNLLTNRPAKYKDTAMISPGSCMPSLYMRKQKALEAELDAKHLSETFDSIEKLSPKHSNINKPLRHIESLAKDYASDSGCFDDDEGPNISTGLETGGLSMLSMYLNSSFLQGQGFSRCRSAGRSSKSERDLDGMQVDLQKFNPSTDNVSIAAERLVNQISTTVARIDKIVEDMSHMHTSSEDSFSLSSEDQCIDWQSALDDLNEPRTKSSSPRHLADAVSSGIRVKAQGLLGARTDDANLSSDSLECGNSTEQDTKSQMSSSKESSSSGQKEELPLYQKRPNNLVLKNGENHQMDRKESDGQPRSREPRTSWNDAWGVRKVDEISKSQFSPFYERSQVASITTRSSPSPSPGNSLTPQSLTSRKQAWVHSGLSQSNRDLSQGLSSTSACTPGSNGQETLQTYCVEDTPICFSRCSSLSSLSSAENALDVQIGSENDVDSDSSLEIIGVEKESPLTAEKTISDESLGSEEMLLKSSDHSFSSTSQPIEIPCPKQEKFLMRKRAASRNMDSSPSSLSDNYLQETPLVLSRCSSVSSLRSFESPSIVSSIQSDPCSEMVSGTISPSDLPDSPGQTMPPSRSKTPLLDHLDKDANQANNQWDSEMKKHMDINEFKERFQLPADIDTMLYFTLEKPNENFSCASSLSALTLHEPYIQKDIELKLMPLLQEKSCFNCLAQEKREDMREERTADGMEKADKLDCILENSDDDIEILKECINSAMPTKFRKVISGLSGQVLQSKKSLQLPVYMLLPAHSQLESGGHTVAKNDNFREDSSYSDSVEGTPVNFSSSASLSDETLEYPQRDSPSVAKVRPEITERRELIPAEGQNTDDLEVPISIRMHEKSLEHGNKYHFNINEVCPHSSSIPRGQSHLLINVNQREVQKLNQNPLPPQQCQNHNDPVFQSGLTANILRKEHAAPRQLVKPDKMGCKRAEEGEQRMEVSGGEYIHGSYAFQSMRHTTPTEEAVYCFYENDTLDRLSVSKDSVKQKNGVKSDYEENLVITQHGEAMNEPNENYKTTMKFKTAKMERSLITDESPLCSLSSSLSSLSDVELEEFQTKTRKAFVKSRKKSANSSAASKSFTQGYSSTPTTRDSSPSSPSYDSEDDLLQKCISSAMPKKRKHSSKQKSEKSAKQSCQNGNSQPHAGANVSWDLPQRNDGSGDVCSSLSDLSSPDVESFEWKAIQEGANSIVTSLHQAAACLSREPSSESDSILSFVSGLSVGSTLHFTIERKDKKRTQKEQPRDLEAAEHVAKEGKKLTEHKATAGKPSNANRGSNIPKQPSRAVSLPVIFRGRTVIYMPDMWKKPNNNANNTPSKKAIPKNNASSKNLNQTFRSRSLHRPGQMTEKVDTSLPKRSMTPPARITRGPSRGSSRNSTPSRQPQRNLTSSTQPNKQVTPHVTKTIVSKIDQKQRTQVTSLPSTPNIRSPASGKLTRKSPVQVSNSQAPAKPETPVKKLSTFQKKNTTASNKSQGSKKMMPPNRLDLVRMSSAKSSGSESDKSNFVRQLTFIKESQGLLKRQKSEASSSESISSLSQSVSPRRSKSDFQAALLR…
SIO_010081: apc2
subclass of: SO_0000673
so part of: apc2
location: join(6101373..6101411,6123872..6123952,6125369..6125744,6128260..6128355,6131587..6131726,6135784..6135861,6137853..6137969,6140247..6140461,6142537..6148321)
location: region:6101373-6148321:1
so has part: feature:6101373-6101411:1:exon
so has part: feature:6123872-6123952:1:exon
so has part: feature:6125369-6125744:1:exon
so has part: feature:6128260-6128355:1:exon
so has part: feature:6131587-6131726:1:exon
so has part: feature:6135784-6135861:1:exon
so has part: feature:6137853-6137969:1:exon
so has part: feature:6140247-6140461:1:exon
so has part: feature:6142537-6148321:1:exon

XP_032902366.1
type: Protein
SIO_000068: ncbiprotein

position:6101373:1
position: 6101373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6101373-6101411:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6123872-6123952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6125369-6125744:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6128260-6128355:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6131587-6131726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6135784-6135861:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6137853-6137969:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6140247-6140461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6142537-6148321:1:exon

c29h19orf25
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: c29h19orf25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6170849..6178330)
location: region:6170849-6178330:-1
so has part: feature:6170849-6178330:-1:exon
subclass of: SO_0000010

116989275
type: Gene
SIO_000068: ncbigene

position:6170849:-1
position: 6170849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6178330:-1
position: 6178330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6170849-6178330:-1:exon

c29h19orf25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: c29h19orf25
product: chromosome 29 C19orf25 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033046477.1
SIO_010081: c29h19orf25
subclass of: SO_0000673
so part of: c29h19orf25
location: complement(join(6170849..6171576,6174245..6174401,6178208..6178330))
location: region:6170849-6178330:-1
so has part: feature:6178208-6178330:-1:exon
so has part: feature:6174245-6174401:-1:exon
so has part: feature:6170849-6171576:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6178208-6178330:-1:exon

position:6178208:-1
position: 6178208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6174245-6174401:-1:exon

position:6174245:-1
position: 6174245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6174401:-1
position: 6174401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6170849-6171576:-1:exon

position:6171576:-1
position: 6171576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

c29h19orf25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: c29h19orf25
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(6171542..6171544),aa:OTHER)
product: LOW QUALITY PROTEIN: UPF0449 protein C19orf25 homolog
translation: MTSKNKKRVILPTRPEPPTIEQILEDVRSACLSDPVFTSFVEGSEAHCEEKCQCRTXDSQYQQSREYVDLNRRLQKERGELSTQCEQLKKAGKQLDLSISEIKDTNFQN
SIO_010081: c29h19orf25
subclass of: SO_0000673
so part of: c29h19orf25
location: complement(join(6171383..6171576,6174245..6174380))
location: region:6171383-6174380:-1
so has part: feature:6174245-6174380:-1:exon
so has part: feature:6171383-6171576:-1:exon

XP_032902368.1
type: Protein
SIO_000068: ncbiprotein

position:6171383:-1
position: 6171383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6174380:-1
position: 6174380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6174245-6174380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6171383-6171576:-1:exon

reep6
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: reep6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6199897..6234724)
location: region:6199897-6234724:-1
so has part: feature:6199897-6234724:-1:exon
subclass of: SO_0000010

116989277
type: Gene
SIO_000068: ncbigene

position:6199897:-1
position: 6199897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6234724:-1
position: 6234724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6199897-6234724:-1:exon

reep6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: reep6
product: receptor accessory protein 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033046483.1
SIO_010081: reep6
subclass of: SO_0000673
so part of: reep6
location: complement(join(6199897..6201979,6203556..6203613,6209064..6209137,6214422..6214590,6216076..6216214,6219699..6219792,6234079..6234260,6234296..6234724))
location: region:6199897-6234724:-1
so has part: feature:6234296-6234724:-1:exon
so has part: feature:6234079-6234260:-1:exon
so has part: feature:6219699-6219792:-1:exon
so has part: feature:6216076-6216214:-1:exon
so has part: feature:6214422-6214590:-1:exon
so has part: feature:6209064-6209137:-1:exon
so has part: feature:6203556-6203613:-1:exon
so has part: feature:6199897-6201979:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6234296-6234724:-1:exon

position:6234296:-1
position: 6234296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6234079-6234260:-1:exon

position:6234079:-1
position: 6234079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6234260:-1
position: 6234260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6219699-6219792:-1:exon

position:6219699:-1
position: 6219699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6219792:-1
position: 6219792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6216076-6216214:-1:exon

position:6216076:-1
position: 6216076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6216214:-1
position: 6216214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6214422-6214590:-1:exon

position:6214422:-1
position: 6214422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6214590:-1
position: 6214590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6209064-6209137:-1:exon

position:6209064:-1
position: 6209064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6209137:-1
position: 6209137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6203556-6203613:-1:exon

position:6203556:-1
position: 6203556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6203613:-1
position: 6203613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6199897-6201979:-1:exon

position:6201979:-1
position: 6201979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

reep6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: reep6
product: receptor accessory protein 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033046486.1
SIO_010081: reep6
subclass of: SO_0000673
so part of: reep6
location: complement(join(6199897..6201976,6214422..6214590,6216076..6216214,6219699..6219792,6234079..6234718))
location: region:6199897-6234718:-1
so has part: feature:6234079-6234718:-1:exon
so has part: feature:6219699-6219792:-1:exon
so has part: feature:6216076-6216214:-1:exon
so has part: feature:6214422-6214590:-1:exon
so has part: feature:6199897-6201976:-1:exon

position:6234718:-1
position: 6234718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6234079-6234718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6219699-6219792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216076-6216214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6214422-6214590:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199897-6201976:-1:exon

position:6201976:-1
position: 6201976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

reep6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: reep6
product: receptor accessory protein 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033046485.1
SIO_010081: reep6
subclass of: SO_0000673
so part of: reep6
location: complement(join(6199897..6201979,6214422..6214590,6216076..6216214,6219699..6219792,6234079..6234704))
location: region:6199897-6234704:-1
so has part: feature:6234079-6234704:-1:exon
so has part: feature:6219699-6219792:-1:exon
so has part: feature:6216076-6216214:-1:exon
so has part: feature:6214422-6214590:-1:exon
so has part: feature:6199897-6201979:-1:exon

position:6234704:-1
position: 6234704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6234079-6234704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6219699-6219792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216076-6216214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6214422-6214590:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6199897-6201979:-1:exon

reep6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: reep6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 6 isoform X3
translation: MPSLRQRFEKFLDEKNFLTNMLDKIEKKTGMRKYHLAAGSITTLGLYLVFGYGASLLCNLIGFVYPAYFSIKAIESTDKEDDTKWLTYWVVYGIFSVAEFFSDIFLYWFPFYYVGKCLFLLWCMAPVVWNGSQLIYNRIVRPLFLKHQSRVDSVVNDLSSQALNAAECVTREVKLHLDKNKDK
SIO_010081: reep6
subclass of: SO_0000673
so part of: reep6
location: complement(join(6201942..6201976,6214422..6214590,6216076..6216214,6219699..6219792,6234079..6234193))
location: region:6201942-6234193:-1
so has part: feature:6234079-6234193:-1:exon
so has part: feature:6219699-6219792:-1:exon
so has part: feature:6216076-6216214:-1:exon
so has part: feature:6214422-6214590:-1:exon
so has part: feature:6201942-6201976:-1:exon

XP_032902377.1
type: Protein
SIO_000068: ncbiprotein

position:6201942:-1
position: 6201942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6234193:-1
position: 6234193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6234079-6234193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6219699-6219792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216076-6216214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6214422-6214590:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6201942-6201976:-1:exon

reep6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: reep6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 6 isoform X2
translation: MPSLRQRFEKFLDEKNFLTNMLDKIEKKTGMRKYHLAAGSITTLGLYLVFGYGASLLCNLIGFVYPAYFSIKAIESTDKEDDTKWLTYWVVYGIFSVAEFFSDIFLYWFPFYYVGKCLFLLWCMAPVVWNGSQLIYNRIVRPLFLKHQSRVDSVVNDLSSQALNAAECVTREAMKLHLDKNKDK
SIO_010081: reep6
subclass of: SO_0000673
so part of: reep6
location: complement(join(6201942..6201979,6214422..6214590,6216076..6216214,6219699..6219792,6234079..6234193))
location: region:6201942-6234193:-1
so has part: feature:6234079-6234193:-1:exon
so has part: feature:6219699-6219792:-1:exon
so has part: feature:6216076-6216214:-1:exon
so has part: feature:6214422-6214590:-1:exon
so has part: feature:6201942-6201979:-1:exon

XP_032902376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6234079-6234193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6219699-6219792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216076-6216214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6214422-6214590:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6201942-6201979:-1:exon

reep6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: reep6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 6 isoform X1
translation: MPSLRQRFEKFLDEKNFLTNMLDKIEKKTGMRKYHLAAGSITTLGLYLVFGYGASLLCNLIGFVYPAYFSIKAIESTDKEDDTKWLTYWVVYGIFSVAEFFSDIFLYWFPFYYVGKCLFLLWCMAPVVWNGSQLIYNRIVRPLFLKHQSRVDSVVNDLSSQALNAAECVTREVLQTLCNSKNLVRADARPKQLAGASSPLSVD
SIO_010081: reep6
subclass of: SO_0000673
so part of: reep6
location: complement(join(6203593..6203613,6209064..6209137,6214422..6214590,6216076..6216214,6219699..6219792,6234079..6234193))
location: region:6203593-6234193:-1
so has part: feature:6234079-6234193:-1:exon
so has part: feature:6219699-6219792:-1:exon
so has part: feature:6216076-6216214:-1:exon
so has part: feature:6214422-6214590:-1:exon
so has part: feature:6209064-6209137:-1:exon
so has part: feature:6203593-6203613:-1:exon

XP_032902374.1
type: Protein
SIO_000068: ncbiprotein

position:6203593:-1
position: 6203593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6234079-6234193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6219699-6219792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6216076-6216214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6214422-6214590:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6209064-6209137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6203593-6203613:-1:exon

pcsk4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: pcsk4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6238193..6264258
location: region:6238193-6264258:1
so has part: feature:6238193-6264258:1:exon
subclass of: SO_0000010

116989276
type: Gene
SIO_000068: ncbigene

position:6238193:1
position: 6238193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6264258:1
position: 6264258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6238193-6264258:1:exon

pcsk4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pcsk4
product: proprotein convertase subtilisin/kexin type 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033046481.1
SIO_010081: pcsk4
subclass of: SO_0000673
so part of: pcsk4
location: join(6238193..6238850,6241311..6241415,6246396..6246488,6249178..6249306,6249566..6249642,6251388..6251473,6252584..6252756,6255630..6255730,6257222..6257325,6258263..6258380,6259888..6260067,6260677..6260801,6262132..6262251,6263687..6264258)
location: region:6238193-6264258:1
so has part: feature:6238193-6238850:1:exon
so has part: feature:6241311-6241415:1:exon
so has part: feature:6246396-6246488:1:exon
so has part: feature:6249178-6249306:1:exon
so has part: feature:6249566-6249642:1:exon
so has part: feature:6251388-6251473:1:exon
so has part: feature:6252584-6252756:1:exon
so has part: feature:6255630-6255730:1:exon
so has part: feature:6257222-6257325:1:exon
so has part: feature:6258263-6258380:1:exon
so has part: feature:6259888-6260067:1:exon
so has part: feature:6260677-6260801:1:exon
so has part: feature:6262132-6262251:1:exon
so has part: feature:6263687-6264258:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6238193-6238850:1:exon

position:6238850:1
position: 6238850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6241311-6241415:1:exon

position:6241311:1
position: 6241311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6241415:1
position: 6241415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6246396-6246488:1:exon

position:6246396:1
position: 6246396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6246488:1
position: 6246488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6249178-6249306:1:exon

position:6249178:1
position: 6249178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6249306:1
position: 6249306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6249566-6249642:1:exon

position:6249566:1
position: 6249566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6249642:1
position: 6249642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6251388-6251473:1:exon

position:6251388:1
position: 6251388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6251473:1
position: 6251473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6252584-6252756:1:exon

position:6252584:1
position: 6252584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6252756:1
position: 6252756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6255630-6255730:1:exon

position:6255630:1
position: 6255630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6255730:1
position: 6255730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6257222-6257325:1:exon

position:6257222:1
position: 6257222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6257325:1
position: 6257325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6258263-6258380:1:exon

position:6258263:1
position: 6258263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6258380:1
position: 6258380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6259888-6260067:1:exon

position:6259888:1
position: 6259888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6260067:1
position: 6260067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6260677-6260801:1:exon

position:6260677:1
position: 6260677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6260801:1
position: 6260801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6262132-6262251:1:exon

position:6262132:1
position: 6262132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6262251:1
position: 6262251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6263687-6264258:1:exon

position:6263687:1
position: 6263687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pcsk4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pcsk4
product: proprotein convertase subtilisin/kexin type 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033046479.1
SIO_010081: pcsk4
subclass of: SO_0000673
so part of: pcsk4
location: join(6238195..6238850,6241311..6241415,6249178..6249306,6249566..6249642,6251388..6251473,6252584..6252756,6253387..6253599,6255630..6255730,6257222..6257325,6258263..6258380,6259888..6260067,6260677..6260801,6262132..6262251,6263687..6264258)
location: region:6238195-6264258:1
so has part: feature:6238195-6238850:1:exon
so has part: feature:6241311-6241415:1:exon
so has part: feature:6249178-6249306:1:exon
so has part: feature:6249566-6249642:1:exon
so has part: feature:6251388-6251473:1:exon
so has part: feature:6252584-6252756:1:exon
so has part: feature:6253387-6253599:1:exon
so has part: feature:6255630-6255730:1:exon
so has part: feature:6257222-6257325:1:exon
so has part: feature:6258263-6258380:1:exon
so has part: feature:6259888-6260067:1:exon
so has part: feature:6260677-6260801:1:exon
so has part: feature:6262132-6262251:1:exon
so has part: feature:6263687-6264258:1:exon

position:6238195:1
position: 6238195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6238195-6238850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6241311-6241415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6249178-6249306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6249566-6249642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6251388-6251473:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6252584-6252756:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6253387-6253599:1:exon

position:6253387:1
position: 6253387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6253599:1
position: 6253599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6255630-6255730:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6257222-6257325:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6258263-6258380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6259888-6260067:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6260677-6260801:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6262132-6262251:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6263687-6264258:1:exon

pcsk4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pcsk4
product: proprotein convertase subtilisin/kexin type 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 50 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033046478.1
SIO_010081: pcsk4
subclass of: SO_0000673
so part of: pcsk4
location: join(6238327..6238850,6241311..6241415,6246396..6246488,6249178..6249306,6249566..6249642,6251388..6251473,6252584..6252756,6253387..6253599,6255630..6255730,6257222..6257325,6258263..6258380,6259888..6260067,6260677..6260801,6262132..6262251,6263687..6264258)
location: region:6238327-6264258:1
so has part: feature:6238327-6238850:1:exon
so has part: feature:6241311-6241415:1:exon
so has part: feature:6246396-6246488:1:exon
so has part: feature:6249178-6249306:1:exon
so has part: feature:6249566-6249642:1:exon
so has part: feature:6251388-6251473:1:exon
so has part: feature:6252584-6252756:1:exon
so has part: feature:6253387-6253599:1:exon
so has part: feature:6255630-6255730:1:exon
so has part: feature:6257222-6257325:1:exon
so has part: feature:6258263-6258380:1:exon
so has part: feature:6259888-6260067:1:exon
so has part: feature:6260677-6260801:1:exon
so has part: feature:6262132-6262251:1:exon
so has part: feature:6263687-6264258:1:exon

position:6238327:1
position: 6238327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6238327-6238850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6241311-6241415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6246396-6246488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6249178-6249306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6249566-6249642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6251388-6251473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6252584-6252756:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6253387-6253599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6255630-6255730:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6257222-6257325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6258263-6258380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6259888-6260067:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6260677-6260801:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6262132-6262251:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6263687-6264258:1:exon

pcsk4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pcsk4
product: proprotein convertase subtilisin/kexin type 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033046482.1
SIO_010081: pcsk4
subclass of: SO_0000673
so part of: pcsk4
location: join(6238333..6238850,6241311..6241415,6246396..6246488,6249178..6249306,6249566..6249642,6251388..6251473,6252584..6252756,6253387..6253599,6255630..6255730,6257222..6257325,6258263..6258380,6259888..6260067,6260677..6260801,6262132..6262251,6262886..6262947,6263687..6263814)
location: region:6238333-6263814:1
so has part: feature:6238333-6238850:1:exon
so has part: feature:6241311-6241415:1:exon
so has part: feature:6246396-6246488:1:exon
so has part: feature:6249178-6249306:1:exon
so has part: feature:6249566-6249642:1:exon
so has part: feature:6251388-6251473:1:exon
so has part: feature:6252584-6252756:1:exon
so has part: feature:6253387-6253599:1:exon
so has part: feature:6255630-6255730:1:exon
so has part: feature:6257222-6257325:1:exon
so has part: feature:6258263-6258380:1:exon
so has part: feature:6259888-6260067:1:exon
so has part: feature:6260677-6260801:1:exon
so has part: feature:6262132-6262251:1:exon
so has part: feature:6262886-6262947:1:exon
so has part: feature:6263687-6263814:1:exon

position:6238333:1
position: 6238333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6263814:1
position: 6263814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6238333-6238850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6241311-6241415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6246396-6246488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6249178-6249306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6249566-6249642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6251388-6251473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6252584-6252756:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6253387-6253599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6255630-6255730:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6257222-6257325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6258263-6258380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6259888-6260067:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6260677-6260801:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6262132-6262251:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6262886-6262947:1:exon

position:6262886:1
position: 6262886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6262947:1
position: 6262947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6263687-6263814:1:exon

pcsk4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pcsk4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proprotein convertase subtilisin/kexin type 4 isoform X1
translation: MCCRRLLHLLLLLLLLLLVPGARQTFAGTRAVRAPDARPLYTNTWAVRVPGGAEHARSIARRHGFINLGRIFEDEDYYYFKHKAVWKRSINPHQMRHRRLEMEPKVTWLQQQVVKRRQKRSFFVPSDPLYHKQWYLNNEIPNDLNVLSAWKRGYTGKGIVITILDDGIEKNHPDLAANYDPDASFDINDNDPDPQPRYNYNDENRHGTRCAGEVAAVANNICGVGVAFNAKIGGVRMLDGEITDVVEARSLSLNPQHIHIYSASWGPEDNGQTVEGPAMLASRAFLKGITNGRGGLGSIFVWASGNGGFQYDNCNCDGYTNSIYTLSVGSTTEQGNIPWYSEACSSTLTTTYSSGTRMEKQIVTTDLRLRCTEKHTGTSASAPLAAGIIALAMEANPALTWRDMQHLVVRASKPLNLKADDWAKNGVGRKVSHHYGYGLLDAGRLVDLATKWLTVHPQRECSIEIIKSPQVISDKLVIKKHINACSGTKNYIRSLEHVEARMSLSYTRRGDLRIYLISPSGTCSNLVDVRPHDASPRGYRDWTFMTIHCWDEDPKGVWTLKIENKGSSRNTGVLSYFKMQLYGTEEDMMARRMKDTVINDCGKWNEDGLCQECRGAFVIFGRHCLSYCPPHYYSVARTLNKTVNGVHKTLAVLACDPCHSSCYSCNGSSQNDCVTCPSFSNYDENQHSCSPPIYPSRSNMNEREDQKHGLYKIAVVLAILIGAPVAVMCCVMSLSWLICRLNIGQAFIVTASATGATEATQLQVHRDTTDEGTGSSETESTYFLTHLDQQ
SIO_010081: pcsk4
subclass of: SO_0000673
so part of: pcsk4
location: join(6238641..6238850,6241311..6241415,6246396..6246488,6249178..6249306,6249566..6249642,6251388..6251473,6252584..6252756,6253387..6253599,6255630..6255730,6257222..6257325,6258263..6258380,6259888..6260067,6260677..6260801,6262132..6262251,6263687..6264225)
location: region:6238641-6264225:1
so has part: feature:6238641-6238850:1:exon
so has part: feature:6241311-6241415:1:exon
so has part: feature:6246396-6246488:1:exon
so has part: feature:6249178-6249306:1:exon
so has part: feature:6249566-6249642:1:exon
so has part: feature:6251388-6251473:1:exon
so has part: feature:6252584-6252756:1:exon
so has part: feature:6253387-6253599:1:exon
so has part: feature:6255630-6255730:1:exon
so has part: feature:6257222-6257325:1:exon
so has part: feature:6258263-6258380:1:exon
so has part: feature:6259888-6260067:1:exon
so has part: feature:6260677-6260801:1:exon
so has part: feature:6262132-6262251:1:exon
so has part: feature:6263687-6264225:1:exon

XP_032902369.1
type: Protein
SIO_000068: ncbiprotein

position:6238641:1
position: 6238641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6264225:1
position: 6264225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6238641-6238850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6241311-6241415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6246396-6246488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6249178-6249306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6249566-6249642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6251388-6251473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6252584-6252756:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6253387-6253599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6255630-6255730:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6257222-6257325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6258263-6258380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6259888-6260067:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6260677-6260801:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6262132-6262251:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6263687-6264225:1:exon

pcsk4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pcsk4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proprotein convertase subtilisin/kexin type 4 isoform X4
translation: MCCRRLLHLLLLLLLLLLVPGARQTFAGTRAVRAPDARPLYTNTWAVRVPGGAEHARSIARRHGFINLGRIFEDEDYYYFKHKAVWKRSINPHQMRHRRLEMEPKVTWLQQQVVKRRQKRSFFVPSDPLYHKQWYLNNEIPNDLNVLSAWKRGYTGKGIVITILDDGIEKNHPDLAANYDPDASFDINDNDPDPQPRYNYNDENRHGTRCAGEVAAVANNICGVGVAFNAKIGGVRMLDGEITDVVEARSLSLNPQHIHIYSASWGPEDNGQTVEGPAMLASRAFLKGITNVTTDLRLRCTEKHTGTSASAPLAAGIIALAMEANPALTWRDMQHLVVRASKPLNLKADDWAKNGVGRKVSHHYGYGLLDAGRLVDLATKWLTVHPQRECSIEIIKSPQVISDKLVIKKHINACSGTKNYIRSLEHVEARMSLSYTRRGDLRIYLISPSGTCSNLVDVRPHDASPRGYRDWTFMTIHCWDEDPKGVWTLKIENKGSSRNTGVLSYFKMQLYGTEEDMMARRMKDTVINDCGKWNEDGLCQECRGAFVIFGRHCLSYCPPHYYSVARTLNKTVNGVHKTLAVLACDPCHSSCYSCNGSSQNDCVTCPSFSNYDENQHSCSPPIYPSRSNMNEREDQKHGLYKIAVVLAILIGAPVAVMCCVMSLSWLICRLNIGQAFIVTASATGATEATQLQVHRDTTDEGTGSSETESTYFLTHLDQQ
SIO_010081: pcsk4
subclass of: SO_0000673
so part of: pcsk4
location: join(6238641..6238850,6241311..6241415,6246396..6246488,6249178..6249306,6249566..6249642,6251388..6251473,6252584..6252756,6255630..6255730,6257222..6257325,6258263..6258380,6259888..6260067,6260677..6260801,6262132..6262251,6263687..6264225)
location: region:6238641-6264225:1
so has part: feature:6238641-6238850:1:exon
so has part: feature:6241311-6241415:1:exon
so has part: feature:6246396-6246488:1:exon
so has part: feature:6249178-6249306:1:exon
so has part: feature:6249566-6249642:1:exon
so has part: feature:6251388-6251473:1:exon
so has part: feature:6252584-6252756:1:exon
so has part: feature:6255630-6255730:1:exon
so has part: feature:6257222-6257325:1:exon
so has part: feature:6258263-6258380:1:exon
so has part: feature:6259888-6260067:1:exon
so has part: feature:6260677-6260801:1:exon
so has part: feature:6262132-6262251:1:exon
so has part: feature:6263687-6264225:1:exon

XP_032902372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6238641-6238850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6241311-6241415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6246396-6246488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6249178-6249306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6249566-6249642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6251388-6251473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6252584-6252756:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6255630-6255730:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6257222-6257325:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6258263-6258380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6259888-6260067:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6260677-6260801:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6262132-6262251:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6263687-6264225:1:exon

pcsk4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pcsk4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proprotein convertase subtilisin/kexin type 4 isoform X2
translation: MCCRRLLHLLLLLLLLLLVPGARQTFAGTRAVRAPDARPLYTNTWAVRVPGGAEHARSIARRHGFINLGRIFEDEDYYYFKHKAVWKRSINPHQMRHRRLEMEPKNNEIPNDLNVLSAWKRGYTGKGIVITILDDGIEKNHPDLAANYDPDASFDINDNDPDPQPRYNYNDENRHGTRCAGEVAAVANNICGVGVAFNAKIGGVRMLDGEITDVVEARSLSLNPQHIHIYSASWGPEDNGQTVEGPAMLASRAFLKGITNGRGGLGSIFVWASGNGGFQYDNCNCDGYTNSIYTLSVGSTTEQGNIPWYSEACSSTLTTTYSSGTRMEKQIVTTDLRLRCTEKHTGTSASAPLAAGIIALAMEANPALTWRDMQHLVVRASKPLNLKADDWAKNGVGRKVSHHYGYGLLDAGRLVDLATKWLTVHPQRECSIEIIKSPQVISDKLVIKKHINACSGTKNYIRSLEHVEARMSLSYTRRGDLRIYLISPSGTCSNLVDVRPHDASPRGYRDWTFMTIHCWDEDPKGVWTLKIENKGSSRNTGVLSYFKMQLYGTEEDMMARRMKDTVINDCGKWNEDGLCQECRGAFVIFGRHCLSYCPPHYYSVARTLNKTVNGVHKTLAVLACDPCHSSCYSCNGSSQNDCVTCPSFSNYDENQHSCSPPIYPSRSNMNEREDQKHGLYKIAVVLAILIGAPVAVMCCVMSLSWLICRLNIGQAFIVTASATGATEATQLQVHRDTTDEGTGSSETESTYFLTHLDQQ
SIO_010081: pcsk4
subclass of: SO_0000673
so part of: pcsk4
location: join(6238641..6238850,6241311..6241415,6249178..6249306,6249566..6249642,6251388..6251473,6252584..6252756,6253387..6253599,6255630..6255730,6257222..6257325,6258263..6258380,6259888..6260067,6260677..6260801,6262132..6262251,6263687..6264225)
location: region:6238641-6264225:1
so has part: feature:6238641-6238850:1:exon
so has part: feature:6241311-6241415:1:exon
so has part: feature:6249178-6249306:1:exon
so has part: feature:6249566-6249642:1:exon
so has part: feature:6251388-6251473:1:exon
so has part: feature:6252584-6252756:1:exon
so has part: feature:6253387-6253599:1:exon
so has part: feature:6255630-6255730:1:exon
so has part: feature:6257222-6257325:1:exon
so has part: feature:6258263-6258380:1:exon
so has part: feature:6259888-6260067:1:exon
so has part: feature:6260677-6260801:1:exon
so has part: feature:6262132-6262251:1:exon
so has part: feature:6263687-6264225:1:exon

XP_032902370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6238641-6238850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6241311-6241415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6249178-6249306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6249566-6249642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6251388-6251473:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6252584-6252756:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6253387-6253599:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6255630-6255730:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6257222-6257325:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6258263-6258380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6259888-6260067:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6260677-6260801:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6262132-6262251:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6263687-6264225:1:exon

pcsk4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pcsk4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proprotein convertase subtilisin/kexin type 4 isoform X5
translation: MCCRRLLHLLLLLLLLLLVPGARQTFAGTRAVRAPDARPLYTNTWAVRVPGGAEHARSIARRHGFINLGRIFEDEDYYYFKHKAVWKRSINPHQMRHRRLEMEPKVTWLQQQVVKRRQKRSFFVPSDPLYHKQWYLNNEIPNDLNVLSAWKRGYTGKGIVITILDDGIEKNHPDLAANYDPDASFDINDNDPDPQPRYNYNDENRHGTRCAGEVAAVANNICGVGVAFNAKIGGVRMLDGEITDVVEARSLSLNPQHIHIYSASWGPEDNGQTVEGPAMLASRAFLKGITNGRGGLGSIFVWASGNGGFQYDNCNCDGYTNSIYTLSVGSTTEQGNIPWYSEACSSTLTTTYSSGTRMEKQIVTTDLRLRCTEKHTGTSASAPLAAGIIALAMEANPALTWRDMQHLVVRASKPLNLKADDWAKNGVGRKVSHHYGYGLLDAGRLVDLATKWLTVHPQRECSIEIIKSPQVISDKLVIKKHINACSGTKNYIRSLEHVEARMSLSYTRRGDLRIYLISPSGTCSNLVDVRPHDASPRGYRDWTFMTIHCWDEDPKGVWTLKIENKGSSRNTGVLSYFKMQLYGTEEDMMARRMKDTVINDCGKWNEDGLCQERKSRA
SIO_010081: pcsk4
subclass of: SO_0000673
so part of: pcsk4
location: join(6238641..6238850,6241311..6241415,6246396..6246488,6249178..6249306,6249566..6249642,6251388..6251473,6252584..6252756,6253387..6253599,6255630..6255730,6257222..6257325,6258263..6258380,6259888..6260067,6260677..6260801,6262132..6262251,6262886..6262905)
location: region:6238641-6262905:1
so has part: feature:6238641-6238850:1:exon
so has part: feature:6241311-6241415:1:exon
so has part: feature:6246396-6246488:1:exon
so has part: feature:6249178-6249306:1:exon
so has part: feature:6249566-6249642:1:exon
so has part: feature:6251388-6251473:1:exon
so has part: feature:6252584-6252756:1:exon
so has part: feature:6253387-6253599:1:exon
so has part: feature:6255630-6255730:1:exon
so has part: feature:6257222-6257325:1:exon
so has part: feature:6258263-6258380:1:exon
so has part: feature:6259888-6260067:1:exon
so has part: feature:6260677-6260801:1:exon
so has part: feature:6262132-6262251:1:exon
so has part: feature:6262886-6262905:1:exon

XP_032902373.1
type: Protein
SIO_000068: ncbiprotein

position:6262905:1
position: 6262905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6238641-6238850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6241311-6241415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6246396-6246488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6249178-6249306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6249566-6249642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6251388-6251473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6252584-6252756:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6253387-6253599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6255630-6255730:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6257222-6257325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6258263-6258380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6259888-6260067:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6260677-6260801:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6262132-6262251:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6262886-6262905:1:exon

pcsk4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pcsk4
product: proprotein convertase subtilisin/kexin type 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033046480.1
SIO_010081: pcsk4
subclass of: SO_0000673
so part of: pcsk4
location: join(6239709..6241415,6246396..6246488,6249178..6249306,6249566..6249642,6251388..6251473,6252584..6252756,6253387..6253599,6255630..6255730,6257222..6257325,6258263..6258380,6259888..6260067,6260677..6260801,6262132..6262251,6263687..6264258)
location: region:6239709-6264258:1
so has part: feature:6239709-6241415:1:exon
so has part: feature:6246396-6246488:1:exon
so has part: feature:6249178-6249306:1:exon
so has part: feature:6249566-6249642:1:exon
so has part: feature:6251388-6251473:1:exon
so has part: feature:6252584-6252756:1:exon
so has part: feature:6253387-6253599:1:exon
so has part: feature:6255630-6255730:1:exon
so has part: feature:6257222-6257325:1:exon
so has part: feature:6258263-6258380:1:exon
so has part: feature:6259888-6260067:1:exon
so has part: feature:6260677-6260801:1:exon
so has part: feature:6262132-6262251:1:exon
so has part: feature:6263687-6264258:1:exon

position:6239709:1
position: 6239709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6239709-6241415:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6246396-6246488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6249178-6249306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6249566-6249642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6251388-6251473:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6252584-6252756:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6253387-6253599:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6255630-6255730:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6257222-6257325:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6258263-6258380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6259888-6260067:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6260677-6260801:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6262132-6262251:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6263687-6264258:1:exon

pcsk4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pcsk4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proprotein convertase subtilisin/kexin type 4 isoform X3
translation: MSEVPISKLFYFSPYSKKIFEDEDYYYFKHKAVWKRSINPHQMRHRRLEMEPKVTWLQQQVVKRRQKRSFFVPSDPLYHKQWYLNNEIPNDLNVLSAWKRGYTGKGIVITILDDGIEKNHPDLAANYDPDASFDINDNDPDPQPRYNYNDENRHGTRCAGEVAAVANNICGVGVAFNAKIGGVRMLDGEITDVVEARSLSLNPQHIHIYSASWGPEDNGQTVEGPAMLASRAFLKGITNGRGGLGSIFVWASGNGGFQYDNCNCDGYTNSIYTLSVGSTTEQGNIPWYSEACSSTLTTTYSSGTRMEKQIVTTDLRLRCTEKHTGTSASAPLAAGIIALAMEANPALTWRDMQHLVVRASKPLNLKADDWAKNGVGRKVSHHYGYGLLDAGRLVDLATKWLTVHPQRECSIEIIKSPQVISDKLVIKKHINACSGTKNYIRSLEHVEARMSLSYTRRGDLRIYLISPSGTCSNLVDVRPHDASPRGYRDWTFMTIHCWDEDPKGVWTLKIENKGSSRNTGVLSYFKMQLYGTEEDMMARRMKDTVINDCGKWNEDGLCQECRGAFVIFGRHCLSYCPPHYYSVARTLNKTVNGVHKTLAVLACDPCHSSCYSCNGSSQNDCVTCPSFSNYDENQHSCSPPIYPSRSNMNEREDQKHGLYKIAVVLAILIGAPVAVMCCVMSLSWLICRLNIGQAFIVTASATGATEATQLQVHRDTTDEGTGSSETESTYFLTHLDQQ
SIO_010081: pcsk4
subclass of: SO_0000673
so part of: pcsk4
location: join(6241257..6241415,6246396..6246488,6249178..6249306,6249566..6249642,6251388..6251473,6252584..6252756,6253387..6253599,6255630..6255730,6257222..6257325,6258263..6258380,6259888..6260067,6260677..6260801,6262132..6262251,6263687..6264225)
location: region:6241257-6264225:1
so has part: feature:6241257-6241415:1:exon
so has part: feature:6246396-6246488:1:exon
so has part: feature:6249178-6249306:1:exon
so has part: feature:6249566-6249642:1:exon
so has part: feature:6251388-6251473:1:exon
so has part: feature:6252584-6252756:1:exon
so has part: feature:6253387-6253599:1:exon
so has part: feature:6255630-6255730:1:exon
so has part: feature:6257222-6257325:1:exon
so has part: feature:6258263-6258380:1:exon
so has part: feature:6259888-6260067:1:exon
so has part: feature:6260677-6260801:1:exon
so has part: feature:6262132-6262251:1:exon
so has part: feature:6263687-6264225:1:exon

XP_032902371.1
type: Protein
SIO_000068: ncbiprotein

position:6241257:1
position: 6241257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6241257-6241415:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6246396-6246488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6249178-6249306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6249566-6249642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6251388-6251473:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6252584-6252756:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6253387-6253599:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6255630-6255730:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6257222-6257325:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6258263-6258380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6259888-6260067:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6260677-6260801:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6262132-6262251:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6263687-6264225:1:exon

tmem79
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tmem79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6279069..6344342)
location: region:6279069-6344342:-1
so has part: feature:6279069-6344342:-1:exon
subclass of: SO_0000010

116989278
type: Gene
SIO_000068: ncbigene

position:6279069:-1
position: 6279069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6344342:-1
position: 6344342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6279069-6344342:-1:exon

tmem79
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tmem79
product: transmembrane protein 79, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033046487.1
SIO_010081: tmem79
subclass of: SO_0000673
so part of: tmem79
location: complement(join(6279069..6282017,6285481..6285694,6310349..6311259,6344181..6344333))
location: region:6279069-6344333:-1
so has part: feature:6344181-6344333:-1:exon
so has part: feature:6310349-6311259:-1:exon
so has part: feature:6285481-6285694:-1:exon
so has part: feature:6279069-6282017:-1:exon

position:6344333:-1
position: 6344333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6344181-6344333:-1:exon

position:6344181:-1
position: 6344181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6310349-6311259:-1:exon

position:6310349:-1
position: 6310349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6311259:-1
position: 6311259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6285481-6285694:-1:exon

position:6285481:-1
position: 6285481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6285694:-1
position: 6285694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6279069-6282017:-1:exon

position:6282017:-1
position: 6282017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tmem79
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tmem79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 79 isoform X1
translation: MTSPRQPASSHELKEFDSVKESITDIINQLQDIDPSRLSFSPFLDLDTQITLAPISDSPESSVEELHSLSDENIDHLTDPAPKGKRLQFNEAHQKLAKQQSAPSDGRLSLIKAELVRNHSFPYTEAKRKRVDNVSVDITRETSGLPGEKASLPSQAPTVPQQKVNAKVGAENADVPEKSHNFTSQASEDQPLLGSSADGETIDLISSDTERNPCGESSQKGPGAGGDGGRRCCSCCHCCSAPQVKAISSVFVALLFTPCILYGLYVFVPFEPPPCPDLTSRMTYTLRCNIIAITPVLLGVVVGSLSRLCSTAIDPLDTNVRAVLIHQRYVGNSIEQFIIYFMNMAVMATYLHQEHLKIIPILSGLFAVARLLYWITAALSSAYRGFGFGLTFFPTLAMLAYNCYCMYELGLDHYFIPAENGGPTRAPAPRLRWWGLGG
SIO_010081: tmem79
subclass of: SO_0000673
so part of: tmem79
location: complement(join(6281810..6282017,6285481..6285694,6310349..6311243))
location: region:6281810-6311243:-1
so has part: feature:6310349-6311243:-1:exon
so has part: feature:6285481-6285694:-1:exon
so has part: feature:6281810-6282017:-1:exon

XP_032902378.1
type: Protein
SIO_000068: ncbiprotein

position:6281810:-1
position: 6281810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6311243:-1
position: 6311243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6310349-6311243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6285481-6285694:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6281810-6282017:-1:exon

tmem79
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tmem79
product: transmembrane protein 79, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033046488.1
SIO_010081: tmem79
subclass of: SO_0000673
so part of: tmem79
location: complement(join(6285509..6285608,6310349..6311259,6344181..6344342))
location: region:6285509-6344342:-1
so has part: feature:6344181-6344342:-1:exon
so has part: feature:6310349-6311259:-1:exon
so has part: feature:6285509-6285608:-1:exon

position:6285509:-1
position: 6285509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6344181-6344342:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6310349-6311259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6285509-6285608:-1:exon

position:6285608:-1
position: 6285608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tmem79
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tmem79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 79 isoform X2
translation: MTSPRQPASSHELKEFDSVKESITDIINQLQDIDPSRLSFSPFLDLDTQITLAPISDSPESSVEELHSLSDENIDHLTDPAPKGKRLQFNEAHQKLAKQQSAPSDGRLSLIKAELVRNHSFPYTEAKRKRVDNVSVDITRETSGLPGEKASLPSQAPTVPQQKVNAKVGAENADVPEKSHNFTSQASEDQPLLGSSADGETIDLISSDTERNPCGESSQKGPGAGGDGGRRCCSCCHCCSAPQVKAISSVFVALLFTPCILYGLYVFVPFEPPPCPDLTSRMTYTLRCNIIAITPVLLEIRWQLH
SIO_010081: tmem79
subclass of: SO_0000673
so part of: tmem79
location: complement(join(6285586..6285608,6310349..6311243))
location: region:6285586-6311243:-1
so has part: feature:6310349-6311243:-1:exon
so has part: feature:6285586-6285608:-1:exon

XP_032902379.1
type: Protein
SIO_000068: ncbiprotein

position:6285586:-1
position: 6285586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6310349-6311243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6285586-6285608:-1:exon

adamtsl5
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: adamtsl5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6431888..6596451)
location: region:6431888-6596451:-1
so has part: feature:6431888-6596451:-1:exon
subclass of: SO_0000010

116989279
type: Gene
SIO_000068: ncbigene

position:6431888:-1
position: 6431888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6596451:-1
position: 6596451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6431888-6596451:-1:exon

adamtsl5
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: adamtsl5
product: ADAMTS like 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416204.1
SIO_010081: adamtsl5
so part of: adamtsl5
location: complement(join(6431888..6431898,6447755..6448461,6455518..6455589,6462957..6463055,6464934..6465159,6469069..6469232,6486248..6486331,6492472..6492595,6497171..6497298,6502161..6502269,6502411..6502471,6509111..6509265,6595423..6595495,6595816..6596451))
location: region:6431888-6596451:-1
so has part: feature:6595816-6596451:-1:exon
so has part: feature:6595423-6595495:-1:exon
so has part: feature:6509111-6509265:-1:exon
so has part: feature:6502411-6502471:-1:exon
so has part: feature:6502161-6502269:-1:exon
so has part: feature:6497171-6497298:-1:exon
so has part: feature:6492472-6492595:-1:exon
so has part: feature:6486248-6486331:-1:exon
so has part: feature:6469069-6469232:-1:exon
so has part: feature:6464934-6465159:-1:exon
so has part: feature:6462957-6463055:-1:exon
so has part: feature:6455518-6455589:-1:exon
so has part: feature:6447755-6448461:-1:exon
so has part: feature:6431888-6431898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6595816-6596451:-1:exon

position:6595816:-1
position: 6595816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6595423-6595495:-1:exon

position:6595423:-1
position: 6595423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6595495:-1
position: 6595495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6509111-6509265:-1:exon

position:6509111:-1
position: 6509111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6509265:-1
position: 6509265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6502411-6502471:-1:exon

position:6502411:-1
position: 6502411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6502471:-1
position: 6502471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6502161-6502269:-1:exon

position:6502161:-1
position: 6502161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6502269:-1
position: 6502269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6497171-6497298:-1:exon

position:6497171:-1
position: 6497171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6497298:-1
position: 6497298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6492472-6492595:-1:exon

position:6492472:-1
position: 6492472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6492595:-1
position: 6492595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6486248-6486331:-1:exon

position:6486248:-1
position: 6486248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6486331:-1
position: 6486331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6469069-6469232:-1:exon

position:6469069:-1
position: 6469069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6469232:-1
position: 6469232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6464934-6465159:-1:exon

position:6464934:-1
position: 6464934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6465159:-1
position: 6465159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6462957-6463055:-1:exon

position:6462957:-1
position: 6462957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6463055:-1
position: 6463055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6455518-6455589:-1:exon

position:6455518:-1
position: 6455518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6455589:-1
position: 6455589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6447755-6448461:-1:exon

position:6447755:-1
position: 6447755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6448461:-1
position: 6448461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6431888-6431898:-1:exon

position:6431898:-1
position: 6431898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

adamtsl5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: adamtsl5
product: ADAMTS like 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033046489.1
SIO_010081: adamtsl5
subclass of: SO_0000673
so part of: adamtsl5
location: complement(join(6447123..6448461,6455518..6455589,6462957..6463055,6464934..6465159,6469069..6469232,6486248..6486331,6492472..6492595,6497171..6497298,6502161..6502269,6502411..6502471,6509111..6509265,6595423..6595495,6595816..6596451))
location: region:6447123-6596451:-1
so has part: feature:6595816-6596451:-1:exon
so has part: feature:6595423-6595495:-1:exon
so has part: feature:6509111-6509265:-1:exon
so has part: feature:6502411-6502471:-1:exon
so has part: feature:6502161-6502269:-1:exon
so has part: feature:6497171-6497298:-1:exon
so has part: feature:6492472-6492595:-1:exon
so has part: feature:6486248-6486331:-1:exon
so has part: feature:6469069-6469232:-1:exon
so has part: feature:6464934-6465159:-1:exon
so has part: feature:6462957-6463055:-1:exon
so has part: feature:6455518-6455589:-1:exon
so has part: feature:6447123-6448461:-1:exon

position:6447123:-1
position: 6447123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6595816-6596451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6595423-6595495:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6509111-6509265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6502411-6502471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6502161-6502269:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6497171-6497298:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6492472-6492595:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6486248-6486331:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6469069-6469232:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6464934-6465159:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6462957-6463055:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6455518-6455589:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6447123-6448461:-1:exon

adamtsl5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: adamtsl5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADAMTS-like protein 5
translation: MGSSLYSWRRRCWKLWLLVSLFLGCGALCGAQAGNPKLRRSQWLSRPRQRRQAWIGEWSAWGSWSVCSGSCGGGASFRMRRCLRYANAEDCRGDQRQYRVCNVQECPPGSIDFRKFQCSLYNNKPIKGNMMVHQWLPFYGAPNQCDLNCLATGKNFYYRFGHVLDGTKCSPNSSDMCISGRCLTVGCDNILGSKASMDVCRVCGGQNSSCVQVRRVYQSAPLASGYFGYNNVTVIPAGATNIKVTDNSKNYLALINGKNHYVINGNWVIDWPGEYDIAGTKIQYKRSAGNQESIEAAGPTAEDLHVMVLLREATSGIEYEFWLPNESYGHYQDGHSPLRQPESAVIEAGLPLSYLPWAQTTTAVTTTTTTTTTTTRRPAFYPGSIHPTQRSQARPHQDARFQNVLPRQDTSPDLPSYCRRCKKSKGKSQRIQQYCQKDFVFRGRILGKRVVGSETRYDVQVKETYKNLYPIVHREYVWVPNACDCPYILVKREYIIMARRHVNFEQTRNRILLEHNSFVRLWQPREDLMMRDLDKYCQRYS
SIO_010081: adamtsl5
subclass of: SO_0000673
so part of: adamtsl5
location: complement(join(6448154..6448461,6455518..6455589,6462957..6463055,6464934..6465159,6469069..6469232,6486248..6486331,6492472..6492595,6497171..6497298,6502161..6502269,6502411..6502471,6509111..6509265,6595423..6595495,6595816..6595838))
location: region:6448154-6595838:-1
so has part: feature:6595816-6595838:-1:exon
so has part: feature:6595423-6595495:-1:exon
so has part: feature:6509111-6509265:-1:exon
so has part: feature:6502411-6502471:-1:exon
so has part: feature:6502161-6502269:-1:exon
so has part: feature:6497171-6497298:-1:exon
so has part: feature:6492472-6492595:-1:exon
so has part: feature:6486248-6486331:-1:exon
so has part: feature:6469069-6469232:-1:exon
so has part: feature:6464934-6465159:-1:exon
so has part: feature:6462957-6463055:-1:exon
so has part: feature:6455518-6455589:-1:exon
so has part: feature:6448154-6448461:-1:exon

XP_032902380.1
type: Protein
SIO_000068: ncbiprotein

position:6448154:-1
position: 6448154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6595838:-1
position: 6595838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6595816-6595838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6595423-6595495:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6509111-6509265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6502411-6502471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6502161-6502269:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6497171-6497298:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6492472-6492595:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6486248-6486331:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6469069-6469232:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6464934-6465159:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6462957-6463055:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6455518-6455589:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6448154-6448461:-1:exon

c2cd4c
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: c2cd4c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6850238..6854474
location: region:6850238-6854474:1
so has part: feature:6850238-6854474:1:exon
subclass of: SO_0000010

116989280
type: Gene
SIO_000068: ncbigene

position:6850238:1
position: 6850238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6854474:1
position: 6854474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6850238-6854474:1:exon

c2cd4c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: c2cd4c
product: C2 calcium dependent domain containing 4C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033046490.1
SIO_010081: c2cd4c
subclass of: SO_0000673
so part of: c2cd4c
location: join(6850238..6850424,6851323..6854474)
location: region:6850238-6854474:1
so has part: feature:6850238-6850424:1:exon
so has part: feature:6851323-6854474:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6850238-6850424:1:exon

position:6850424:1
position: 6850424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6851323-6854474:1:exon

position:6851323:1
position: 6851323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c2cd4c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: c2cd4c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C2 calcium-dependent domain-containing protein 4C
translation: MWLFDKIRGSVENLNRAGDAGGRDKQPKGPLFSNVLTPDKIPDFFIPPKFPISSAEGAPAENGENRQKKSNLKASTSEQIFVVKKPQGSPRLKMKTSSEAGSSNLLKVANRHIIQIESADETSSDGVAETGCNTNYDPHSQSAMSLPYIPLTQTSYGFSTLVESPHTRRKESLFHTDHGSPVTSPSSPRKRGSGHRSNGESQHLNPPEFSLSLASTYRYFSGGDSDTASSAESSPFNSPLLSRSVSGSSLLKMFSHENLAKHCKPLQSFTRNSSLSTDECSSTDASPNISKRLRCPTPPAGGPPASQGVLPLSLLHYQDRVHKEHTVRLNRGGAIRLAAEYDSTNARLRIRVITAEDLYDKTLDNKTINCCVILYLTPGKVQKQRSTIIKNSRNPIFNEDFFFDGLPLDEFKRAALKLKVVNKASSLKRDAVLGEKELKLSLLLPFV
SIO_010081: c2cd4c
subclass of: SO_0000673
so part of: c2cd4c
location: 6851354..6852697
location: region:6851354-6852697:1
so has part: feature:6851354-6852697:1:exon

XP_032902381.1
type: Protein
SIO_000068: ncbiprotein

position:6851354:1
position: 6851354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6852697:1
position: 6852697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6851354-6852697:1:exon

LOC116989684
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6978146..6990297)
location: region:6978146-6990297:-1
so has part: feature:6978146-6990297:-1:exon
subclass of: SO_0000011

116989684
type: Gene
SIO_000068: ncbigene

position:6978146:-1
position: 6978146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6990297:-1
position: 6990297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6978146-6990297:-1:exon

LOC116989684
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989684
product: uncharacterized LOC116989684
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416291.1
SIO_010081: LOC116989684
subclass of: SO_0000673
so part of: LOC116989684
location: complement(join(6978146..6978187,6989238..6989239,6990276..6990297))
location: region:6978146-6990297:-1
so has part: feature:6990276-6990297:-1:exon
so has part: feature:6989238-6989239:-1:exon
so has part: feature:6978146-6978187:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6990276-6990297:-1:exon

position:6990276:-1
position: 6990276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6989238-6989239:-1:exon

position:6989238:-1
position: 6989238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6989239:-1
position: 6989239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6978146-6978187:-1:exon

position:6978187:-1
position: 6978187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989762
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989762
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(7006344..7006452)
location: region:7006344-7006452:-1
so has part: feature:7006344-7006452:-1:exon

116989762
type: Gene
SIO_000068: ncbigene

position:7006344:-1
position: 7006344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7006452:-1
position: 7006452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7006344-7006452:-1:exon

LOC116989762
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116989762
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116989762
subclass of: SO_0000673
so part of: LOC116989762
location: complement(7006344..7006452)
location: region:7006344-7006452:-1
so has part: feature:7006344-7006452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7006344-7006452:-1:exon

LOC116989281
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7098888..7174225)
location: region:7098888-7174225:-1
so has part: feature:7098888-7174225:-1:exon
subclass of: SO_0000010

116989281
type: Gene
SIO_000068: ncbigene

position:7098888:-1
position: 7098888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7174225:-1
position: 7174225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7098888-7174225:-1:exon

LOC116989281
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989281
product: guanine nucleotide-binding protein subunit alpha-11-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033046492.1
SIO_010081: LOC116989281
subclass of: SO_0000673
so part of: LOC116989281
location: complement(join(7098888..7100080,7102043..7102196,7106590..7106719,7108547..7108675,7111762..7111916,7131231..7131415,7173640..7174225))
location: region:7098888-7174225:-1
so has part: feature:7173640-7174225:-1:exon
so has part: feature:7131231-7131415:-1:exon
so has part: feature:7111762-7111916:-1:exon
so has part: feature:7108547-7108675:-1:exon
so has part: feature:7106590-7106719:-1:exon
so has part: feature:7102043-7102196:-1:exon
so has part: feature:7098888-7100080:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7173640-7174225:-1:exon

position:7173640:-1
position: 7173640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7131231-7131415:-1:exon

position:7131231:-1
position: 7131231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7131415:-1
position: 7131415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7111762-7111916:-1:exon

position:7111762:-1
position: 7111762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7111916:-1
position: 7111916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7108547-7108675:-1:exon

position:7108547:-1
position: 7108547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7108675:-1
position: 7108675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7106590-7106719:-1:exon

position:7106590:-1
position: 7106590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7106719:-1
position: 7106719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7102043-7102196:-1:exon

position:7102043:-1
position: 7102043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7102196:-1
position: 7102196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7098888-7100080:-1:exon

position:7100080:-1
position: 7100080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989281
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989281
product: guanine nucleotide-binding protein subunit alpha-11-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 105 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033046491.1
SIO_010081: LOC116989281
subclass of: SO_0000673
so part of: LOC116989281
location: complement(join(7098888..7100080,7102043..7102196,7106590..7106719,7108547..7108675,7111762..7111916,7121751..7121930))
location: region:7098888-7121930:-1
so has part: feature:7121751-7121930:-1:exon
so has part: feature:7111762-7111916:-1:exon
so has part: feature:7108547-7108675:-1:exon
so has part: feature:7106590-7106719:-1:exon
so has part: feature:7102043-7102196:-1:exon
so has part: feature:7098888-7100080:-1:exon

position:7121930:-1
position: 7121930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7121751-7121930:-1:exon

position:7121751:-1
position: 7121751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7111762-7111916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7108547-7108675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7106590-7106719:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7102043-7102196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7098888-7100080:-1:exon

LOC116989281
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein subunit alpha-11-like isoform X2
translation: MAARRRLLPRCPCSCCMTEDEKVAFDINTKINQALLQQKKRRKRDLKLLLLGTGESGKSTFIKQMRIIHGSGYSEEDRKAFAKLVYQNIITAMQSITRAMDSLNIQYQYQENKEHSHMIKELEAYKITTLDRHHVDAIKSLWNDLGVRICYERRREYQLLDSTNYYLSDIDRIAASDYIPTDQDVLRVRVPTTGINEYSFNMHKVCLRIVDVGGQKSERRKWIHCFENVMSVIFLASLSEYDQVLEESENENRMRESLALFHFIVKSKYFQTSSIILFLNKMDILQEKILKSHLAEYLHEFKGTKGNAEAAKEFILEMYMRQNESKRTMYHHFTCATDTENIRRVFMDVRDTILMKTLIDLDLM
SIO_010081: LOC116989281
subclass of: SO_0000673
so part of: LOC116989281
location: complement(join(7099893..7100080,7102043..7102196,7106590..7106719,7108547..7108675,7111762..7111916,7131231..7131415,7173640..7173793))
location: region:7099893-7173793:-1
so has part: feature:7173640-7173793:-1:exon
so has part: feature:7131231-7131415:-1:exon
so has part: feature:7111762-7111916:-1:exon
so has part: feature:7108547-7108675:-1:exon
so has part: feature:7106590-7106719:-1:exon
so has part: feature:7102043-7102196:-1:exon
so has part: feature:7099893-7100080:-1:exon

XP_032902383.1
type: Protein
SIO_000068: ncbiprotein

position:7099893:-1
position: 7099893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7173793:-1
position: 7173793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7173640-7173793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7131231-7131415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7111762-7111916:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7108547-7108675:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7106590-7106719:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7102043-7102196:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7099893-7100080:-1:exon

LOC116989281
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein subunit alpha-14-like isoform X1
translation: MRIIHGSGYSEEDRKAFAKLVYQNIITAMQSITRAMDSLNIQYQYQENKEHSHMIKELEAYKITTLDRHHVDAIKSLWNDLGVRICYERRREYQLLDSTNYYLSDIDRIAASDYIPTDQDVLRVRVPTTGINEYSFNMHKVCLRIVDVGGQKSERRKWIHCFENVMSVIFLASLSEYDQVLEESENENRMRESLALFHFIVKSKYFQTSSIILFLNKMDILQEKILKSHLAEYLHEFKGTKGNAEAAKEFILEMYMRQNESKRTMYHHFTCATDTENIRRVFMDVRDTILMKTLIDLDLM
SIO_010081: LOC116989281
subclass of: SO_0000673
so part of: LOC116989281
location: complement(join(7099893..7100080,7102043..7102196,7106590..7106719,7108547..7108675,7111762..7111916,7121751..7121897))
location: region:7099893-7121897:-1
so has part: feature:7121751-7121897:-1:exon
so has part: feature:7111762-7111916:-1:exon
so has part: feature:7108547-7108675:-1:exon
so has part: feature:7106590-7106719:-1:exon
so has part: feature:7102043-7102196:-1:exon
so has part: feature:7099893-7100080:-1:exon

XP_032902382.1
type: Protein
SIO_000068: ncbiprotein

position:7121897:-1
position: 7121897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7121751-7121897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7111762-7111916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7108547-7108675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7106590-7106719:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7102043-7102196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7099893-7100080:-1:exon

LOC116989282
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989282
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7279248..7384466)
location: region:7279248-7384466:-1
so has part: feature:7279248-7384466:-1:exon
subclass of: SO_0000010

116989282
type: Gene
SIO_000068: ncbigene

position:7279248:-1
position: 7279248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7384466:-1
position: 7384466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7279248-7384466:-1:exon

LOC116989282
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989282
product: guanine nucleotide-binding protein G(q) subunit alpha-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 200 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033046494.1
SIO_010081: LOC116989282
subclass of: SO_0000673
so part of: LOC116989282
location: complement(join(7279248..7286863,7289480..7289633,7290119..7290248,7296213..7296341,7302217..7302371,7322016..7322200,7383717..7384466))
location: region:7279248-7384466:-1
so has part: feature:7383717-7384466:-1:exon
so has part: feature:7322016-7322200:-1:exon
so has part: feature:7302217-7302371:-1:exon
so has part: feature:7296213-7296341:-1:exon
so has part: feature:7290119-7290248:-1:exon
so has part: feature:7289480-7289633:-1:exon
so has part: feature:7279248-7286863:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7383717-7384466:-1:exon

position:7383717:-1
position: 7383717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7322016-7322200:-1:exon

position:7322016:-1
position: 7322016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7322200:-1
position: 7322200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7302217-7302371:-1:exon

position:7302217:-1
position: 7302217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7302371:-1
position: 7302371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7296213-7296341:-1:exon

position:7296213:-1
position: 7296213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7296341:-1
position: 7296341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7290119-7290248:-1:exon

position:7290119:-1
position: 7290119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7290248:-1
position: 7290248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7289480-7289633:-1:exon

position:7289480:-1
position: 7289480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7289633:-1
position: 7289633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7279248-7286863:-1:exon

position:7286863:-1
position: 7286863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989282
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989282
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(q) subunit alpha-like
translation: MTLDSVMACCLSEEAKESKRINAEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDDDKRGFTKLVYQNIFTAMQSMIRAMETLKIQYKYEQNKANAQLIREVDVEKVASFSSPYVSAIKTLWHDPGIQECYDRRREYQLSDSAKYYLSDLERISDPAYLPTQQDVLRVRIPTTGIIEYPFDLQSIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEFDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNLV
SIO_010081: LOC116989282
subclass of: SO_0000673
so part of: LOC116989282
location: complement(join(7286673..7286863,7289480..7289633,7290119..7290248,7296213..7296341,7302217..7302371,7322016..7322200,7383717..7383852))
location: region:7286673-7383852:-1
so has part: feature:7383717-7383852:-1:exon
so has part: feature:7322016-7322200:-1:exon
so has part: feature:7302217-7302371:-1:exon
so has part: feature:7296213-7296341:-1:exon
so has part: feature:7290119-7290248:-1:exon
so has part: feature:7289480-7289633:-1:exon
so has part: feature:7286673-7286863:-1:exon

XP_032902385.1
type: Protein
SIO_000068: ncbiprotein

position:7286673:-1
position: 7286673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7383852:-1
position: 7383852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7383717-7383852:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7322016-7322200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7302217-7302371:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7296213-7296341:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7290119-7290248:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7289480-7289633:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7286673-7286863:-1:exon

tle5
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tle5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7713579..7847182
location: region:7713579-7847182:1
so has part: feature:7713579-7847182:1:exon
subclass of: SO_0000010

116989283
type: Gene
SIO_000068: ncbigene

position:7713579:1
position: 7713579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7847182:1
position: 7847182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7713579-7847182:1:exon

tle5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tle5
product: TLE family member 5, transcriptional modulator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033046495.1
SIO_010081: tle5
subclass of: SO_0000673
so part of: tle5
location: join(7713579..7714248,7759823..7759920,7767485..7767548,7771970..7772014,7837133..7837195,7837409..7837483,7843958..7847182)
location: region:7713579-7847182:1
so has part: feature:7713579-7714248:1:exon
so has part: feature:7759823-7759920:1:exon
so has part: feature:7767485-7767548:1:exon
so has part: feature:7771970-7772014:1:exon
so has part: feature:7837133-7837195:1:exon
so has part: feature:7837409-7837483:1:exon
so has part: feature:7843958-7847182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7713579-7714248:1:exon

position:7714248:1
position: 7714248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7759823-7759920:1:exon

position:7759823:1
position: 7759823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7759920:1
position: 7759920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7767485-7767548:1:exon

position:7767485:1
position: 7767485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7767548:1
position: 7767548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7771970-7772014:1:exon

position:7771970:1
position: 7771970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7772014:1
position: 7772014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7837133-7837195:1:exon

position:7837133:1
position: 7837133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7837195:1
position: 7837195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7837409-7837483:1:exon

position:7837409:1
position: 7837409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7837483:1
position: 7837483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7843958-7847182:1:exon

position:7843958:1
position: 7843958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tle5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tle5
product: TLE family member 5, transcriptional modulator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033046496.1
SIO_010081: tle5
subclass of: SO_0000673
so part of: tle5
location: join(7713579..7714248,7759823..7759920,7767485..7767548,7771970..7772014,7837133..7837195,7837409..7837483,7843961..7847182)
location: region:7713579-7847182:1
so has part: feature:7713579-7714248:1:exon
so has part: feature:7759823-7759920:1:exon
so has part: feature:7767485-7767548:1:exon
so has part: feature:7771970-7772014:1:exon
so has part: feature:7837133-7837195:1:exon
so has part: feature:7837409-7837483:1:exon
so has part: feature:7843961-7847182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7713579-7714248:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7759823-7759920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7767485-7767548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7771970-7772014:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7837133-7837195:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7837409-7837483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7843961-7847182:1:exon

position:7843961:1
position: 7843961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tle5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tle5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TLE family member 5 isoform X1
translation: MYPQARQSAPSQSAQQLKFTTSDSCDRIKDEFQFLQAQYHSLKLECDKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVIPFLSQEHQQQVVQAIERAKQVTAPELNTVIRQQLQAQQLSHLHGLTVPLTPLPAGLQPPVIPSVSASAGLLALSSALGSQIHLATKDDKNHHDNDHQRDEGVQKPD
SIO_010081: tle5
subclass of: SO_0000673
so part of: tle5
location: join(7714225..7714248,7759823..7759920,7767485..7767548,7771970..7772014,7837133..7837195,7837409..7837483,7843958..7844185)
location: region:7714225-7844185:1
so has part: feature:7714225-7714248:1:exon
so has part: feature:7759823-7759920:1:exon
so has part: feature:7767485-7767548:1:exon
so has part: feature:7771970-7772014:1:exon
so has part: feature:7837133-7837195:1:exon
so has part: feature:7837409-7837483:1:exon
so has part: feature:7843958-7844185:1:exon

XP_032902386.1
type: Protein
SIO_000068: ncbiprotein

position:7714225:1
position: 7714225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7844185:1
position: 7844185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7714225-7714248:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7759823-7759920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7767485-7767548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7771970-7772014:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7837133-7837195:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7837409-7837483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7843958-7844185:1:exon

tle5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tle5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TLE family member 5 isoform X2
translation: MYPQARQSAPSQSAQQLKFTTSDSCDRIKDEFQFLQAQYHSLKLECDKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVIPFLSQEHQQQVVQAIERAKQVTAPELNTVIRQLQAQQLSHLHGLTVPLTPLPAGLQPPVIPSVSASAGLLALSSALGSQIHLATKDDKNHHDNDHQRDEGVQKPD
SIO_010081: tle5
subclass of: SO_0000673
so part of: tle5
location: join(7714225..7714248,7759823..7759920,7767485..7767548,7771970..7772014,7837133..7837195,7837409..7837483,7843961..7844185)
location: region:7714225-7844185:1
so has part: feature:7714225-7714248:1:exon
so has part: feature:7759823-7759920:1:exon
so has part: feature:7767485-7767548:1:exon
so has part: feature:7771970-7772014:1:exon
so has part: feature:7837133-7837195:1:exon
so has part: feature:7837409-7837483:1:exon
so has part: feature:7843961-7844185:1:exon

XP_032902387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7714225-7714248:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7759823-7759920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7767485-7767548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7771970-7772014:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7837133-7837195:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7837409-7837483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7843961-7844185:1:exon

LOC116989685
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989685
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7982966..7998519
location: region:7982966-7998519:1
so has part: feature:7982966-7998519:1:exon
subclass of: SO_0000011

116989685
type: Gene
SIO_000068: ncbigene

position:7982966:1
position: 7982966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7998519:1
position: 7998519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7982966-7998519:1:exon

LOC116989685
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989685
product: uncharacterized LOC116989685
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004416292.1
SIO_010081: LOC116989685
subclass of: SO_0000673
so part of: LOC116989685
location: join(7982966..7983002,7983274..7983275,7998510..7998519)
location: region:7982966-7998519:1
so has part: feature:7982966-7983002:1:exon
so has part: feature:7983274-7983275:1:exon
so has part: feature:7998510-7998519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7982966-7983002:1:exon

position:7983002:1
position: 7983002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7983274-7983275:1:exon

position:7983274:1
position: 7983274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7983275:1
position: 7983275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7998510-7998519:1:exon

position:7998510:1
position: 7998510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989716
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8023695..8036257
location: region:8023695-8036257:1
so has part: feature:8023695-8036257:1:exon

116989716
type: Gene
SIO_000068: ncbigene

position:8023695:1
position: 8023695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8036257:1
position: 8036257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8023695-8036257:1:exon

LOC116989716
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116989716
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116989716
subclass of: SO_0000673
so part of: LOC116989716
location: 8023695..8024078
location: region:8023695-8024078:1
so has part: feature:8023695-8024078:1:exon

position:8024078:1
position: 8024078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8023695-8024078:1:exon

LOC116989716
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116989716
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116989716
subclass of: SO_0000673
so part of: LOC116989716
location: 8032103..8032198
location: region:8032103-8032198:1
so has part: feature:8032103-8032198:1:exon

position:8032103:1
position: 8032103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8032198:1
position: 8032198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8032103-8032198:1:exon

LOC116989716
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116989716
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116989716
subclass of: SO_0000673
so part of: LOC116989716
location: 8035251..8035315
location: region:8035251-8035315:1
so has part: feature:8035251-8035315:1:exon

position:8035251:1
position: 8035251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8035315:1
position: 8035315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8035251-8035315:1:exon

LOC116989716
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116989716
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116989716
subclass of: SO_0000673
so part of: LOC116989716
location: 8036241..8036257
location: region:8036241-8036257:1
so has part: feature:8036241-8036257:1:exon

position:8036241:1
position: 8036241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8036241-8036257:1:exon

LOC116989284
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8133901..8356379
location: region:8133901-8356379:1
so has part: feature:8133901-8356379:1:exon
subclass of: SO_0000010

116989284
type: Gene
SIO_000068: ncbigene

position:8133901:1
position: 8133901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8356379:1
position: 8356379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8133901-8356379:1:exon

LOC116989284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989284
product: transducin-like enhancer protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033046498.1
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8133901..8134567,8139427..8139524,8156683..8156758,8173706..8173750,8219054..8219116,8234693..8234767,8236501..8236696,8239845..8239867,8297919..8298038,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8356379)
location: region:8133901-8356379:1
so has part: feature:8133901-8134567:1:exon
so has part: feature:8139427-8139524:1:exon
so has part: feature:8156683-8156758:1:exon
so has part: feature:8173706-8173750:1:exon
so has part: feature:8219054-8219116:1:exon
so has part: feature:8234693-8234767:1:exon
so has part: feature:8236501-8236696:1:exon
so has part: feature:8239845-8239867:1:exon
so has part: feature:8297919-8298038:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8356379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8133901-8134567:1:exon

position:8134567:1
position: 8134567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8139427-8139524:1:exon

position:8139427:1
position: 8139427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8139524:1
position: 8139524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8156683-8156758:1:exon

position:8156683:1
position: 8156683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8156758:1
position: 8156758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8173706-8173750:1:exon

position:8173706:1
position: 8173706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8173750:1
position: 8173750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8219054-8219116:1:exon

position:8219054:1
position: 8219054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8219116:1
position: 8219116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8234693-8234767:1:exon

position:8234693:1
position: 8234693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8234767:1
position: 8234767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8236501-8236696:1:exon

position:8236501:1
position: 8236501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8236696:1
position: 8236696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8239845-8239867:1:exon

position:8239845:1
position: 8239845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8239867:1
position: 8239867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8297919-8298038:1:exon

position:8297919:1
position: 8297919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8298038:1
position: 8298038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8314068-8314121:1:exon

position:8314068:1
position: 8314068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8314121:1
position: 8314121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8314953-8315105:1:exon

position:8314953:1
position: 8314953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8315105:1
position: 8315105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8316330-8316459:1:exon

position:8316330:1
position: 8316330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8316459:1
position: 8316459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8319696-8319856:1:exon

position:8319696:1
position: 8319696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8319856:1
position: 8319856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8324594-8324670:1:exon

position:8324594:1
position: 8324594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8324670:1
position: 8324670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8338178-8338427:1:exon

position:8338178:1
position: 8338178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8338427:1
position: 8338427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8339566-8339813:1:exon

position:8339566:1
position: 8339566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8339813:1
position: 8339813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8341950-8342097:1:exon

position:8341950:1
position: 8341950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8342097:1
position: 8342097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8345544-8345694:1:exon

position:8345544:1
position: 8345544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8345694:1
position: 8345694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8353571-8353647:1:exon

position:8353571:1
position: 8353571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8353647:1
position: 8353647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8354769-8356379:1:exon

position:8354769:1
position: 8354769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989284
product: transducin-like enhancer protein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033046501.1
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8133901..8134567,8139427..8139524,8156683..8156758,8173706..8173750,8219054..8219116,8234693..8234767,8236501..8236696,8239845..8239867,8297919..8298026,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8356379)
location: region:8133901-8356379:1
so has part: feature:8133901-8134567:1:exon
so has part: feature:8139427-8139524:1:exon
so has part: feature:8156683-8156758:1:exon
so has part: feature:8173706-8173750:1:exon
so has part: feature:8219054-8219116:1:exon
so has part: feature:8234693-8234767:1:exon
so has part: feature:8236501-8236696:1:exon
so has part: feature:8239845-8239867:1:exon
so has part: feature:8297919-8298026:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8356379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8133901-8134567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8139427-8139524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8156683-8156758:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8173706-8173750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8219054-8219116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8234693-8234767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8236501-8236696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8239845-8239867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8297919-8298026:1:exon

position:8298026:1
position: 8298026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8314068-8314121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8314953-8315105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8316330-8316459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8319696-8319856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8324594-8324670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8338178-8338427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8339566-8339813:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8341950-8342097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8345544-8345694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8353571-8353647:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8354769-8356379:1:exon

LOC116989284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989284
product: transducin-like enhancer protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033046499.1
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8133901..8134567,8139427..8139524,8156683..8156758,8173706..8173750,8219054..8219116,8234693..8234767,8236504..8236696,8239845..8239867,8297919..8298038,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8356379)
location: region:8133901-8356379:1
so has part: feature:8133901-8134567:1:exon
so has part: feature:8139427-8139524:1:exon
so has part: feature:8156683-8156758:1:exon
so has part: feature:8173706-8173750:1:exon
so has part: feature:8219054-8219116:1:exon
so has part: feature:8234693-8234767:1:exon
so has part: feature:8236504-8236696:1:exon
so has part: feature:8239845-8239867:1:exon
so has part: feature:8297919-8298038:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8356379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8133901-8134567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8139427-8139524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8156683-8156758:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8173706-8173750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8219054-8219116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8234693-8234767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8236504-8236696:1:exon

position:8236504:1
position: 8236504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8239845-8239867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8297919-8298038:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8314068-8314121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8314953-8315105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8316330-8316459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8319696-8319856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8324594-8324670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8338178-8338427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8339566-8339813:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8341950-8342097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8345544-8345694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8353571-8353647:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8354769-8356379:1:exon

LOC116989284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989284
product: transducin-like enhancer protein 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033046504.1
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8133901..8134567,8139427..8139524,8156683..8156758,8173706..8173750,8219054..8219116,8234693..8234767,8236504..8236696,8239845..8239867,8297919..8298026,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8356379)
location: region:8133901-8356379:1
so has part: feature:8133901-8134567:1:exon
so has part: feature:8139427-8139524:1:exon
so has part: feature:8156683-8156758:1:exon
so has part: feature:8173706-8173750:1:exon
so has part: feature:8219054-8219116:1:exon
so has part: feature:8234693-8234767:1:exon
so has part: feature:8236504-8236696:1:exon
so has part: feature:8239845-8239867:1:exon
so has part: feature:8297919-8298026:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8356379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8133901-8134567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8139427-8139524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8156683-8156758:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8173706-8173750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8219054-8219116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8234693-8234767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8236504-8236696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8239845-8239867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8297919-8298026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8314068-8314121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8314953-8315105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8316330-8316459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8319696-8319856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8324594-8324670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8338178-8338427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8339566-8339813:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8341950-8342097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8345544-8345694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8353571-8353647:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8354769-8356379:1:exon

LOC116989284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989284
product: transducin-like enhancer protein 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033046505.1
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8133901..8134567,8139427..8139524,8156683..8156758,8173706..8173750,8219054..8219116,8236501..8236696,8239845..8239867,8297919..8298038,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8356379)
location: region:8133901-8356379:1
so has part: feature:8133901-8134567:1:exon
so has part: feature:8139427-8139524:1:exon
so has part: feature:8156683-8156758:1:exon
so has part: feature:8173706-8173750:1:exon
so has part: feature:8219054-8219116:1:exon
so has part: feature:8236501-8236696:1:exon
so has part: feature:8239845-8239867:1:exon
so has part: feature:8297919-8298038:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8356379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8133901-8134567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8139427-8139524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8156683-8156758:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8173706-8173750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8219054-8219116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8236501-8236696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8239845-8239867:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8297919-8298038:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8314068-8314121:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8314953-8315105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8316330-8316459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8319696-8319856:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8324594-8324670:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8338178-8338427:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8339566-8339813:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8341950-8342097:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8345544-8345694:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8353571-8353647:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8354769-8356379:1:exon

LOC116989284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989284
product: transducin-like enhancer protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033046500.1
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8133901..8134567,8139427..8139524,8156683..8156746,8173706..8173750,8219054..8219116,8234693..8234767,8236501..8236696,8239845..8239867,8297919..8298038,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8356379)
location: region:8133901-8356379:1
so has part: feature:8133901-8134567:1:exon
so has part: feature:8139427-8139524:1:exon
so has part: feature:8156683-8156746:1:exon
so has part: feature:8173706-8173750:1:exon
so has part: feature:8219054-8219116:1:exon
so has part: feature:8234693-8234767:1:exon
so has part: feature:8236501-8236696:1:exon
so has part: feature:8239845-8239867:1:exon
so has part: feature:8297919-8298038:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8356379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8133901-8134567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8139427-8139524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8156683-8156746:1:exon

position:8156746:1
position: 8156746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8173706-8173750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8219054-8219116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8234693-8234767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8236501-8236696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8239845-8239867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8297919-8298038:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8314068-8314121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8314953-8315105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8316330-8316459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8319696-8319856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8324594-8324670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8338178-8338427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8339566-8339813:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8341950-8342097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8345544-8345694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8353571-8353647:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8354769-8356379:1:exon

LOC116989284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989284
product: transducin-like enhancer protein 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033046502.1
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8133901..8134567,8139427..8139524,8156683..8156746,8173706..8173750,8219054..8219116,8234693..8234767,8236504..8236696,8239845..8239867,8297919..8298038,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8356379)
location: region:8133901-8356379:1
so has part: feature:8133901-8134567:1:exon
so has part: feature:8139427-8139524:1:exon
so has part: feature:8156683-8156746:1:exon
so has part: feature:8173706-8173750:1:exon
so has part: feature:8219054-8219116:1:exon
so has part: feature:8234693-8234767:1:exon
so has part: feature:8236504-8236696:1:exon
so has part: feature:8239845-8239867:1:exon
so has part: feature:8297919-8298038:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8356379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8133901-8134567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8139427-8139524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8156683-8156746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8173706-8173750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8219054-8219116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8234693-8234767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8236504-8236696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8239845-8239867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8297919-8298038:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8314068-8314121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8314953-8315105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8316330-8316459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8319696-8319856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8324594-8324670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8338178-8338427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8339566-8339813:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8341950-8342097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8345544-8345694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8353571-8353647:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8354769-8356379:1:exon

LOC116989284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 4 isoform X1
translation: MYPQGRHPAPHQPGQSFKFTVVETCDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMVCTQYYEMSYGLNIEMHKQAEIVKRLSTICAQIIPFLSQEHQQQVVQAIERAKQVTMAELNAIIGQQQLQHLSHHAPPIPLTPHPSGLQVAGIPSLGGGSGLLALSSALGVHAHLAMKEDKNHLDMEHHRDGDRDASRSKSVSPSDSLRAEDRHRGSLDYTTEGKKRKCDDKDSVGHYDSDGDKSDDNLVVDVSNEDPSSPQGSPSHSPRGNGLDKFHLLRKDAPSSPASLASSRSTPPTKSKEPGLNEKATTPVSKSITPTPRSDSLTPGPSSASRLRQMSNKSSVDALGLRSPLTVPGPYATPFGMMAHAGMNGELASPGAYASLHISPQMSSAAVYCRSPMVAFDSHPHMRASGLPPSLPTIPGGKPAYSFHVSADSQMQPVPFPPDALVGPGIPRHARQINNLNHGEVVCAVTVSNPMRHVYTGGKGCVKVWDISQPGSKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFACCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8134544..8134567,8139427..8139524,8156683..8156758,8173706..8173750,8219054..8219116,8234693..8234767,8236501..8236696,8239845..8239867,8297919..8298038,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8354876)
location: region:8134544-8354876:1
so has part: feature:8134544-8134567:1:exon
so has part: feature:8139427-8139524:1:exon
so has part: feature:8156683-8156758:1:exon
so has part: feature:8173706-8173750:1:exon
so has part: feature:8219054-8219116:1:exon
so has part: feature:8234693-8234767:1:exon
so has part: feature:8236501-8236696:1:exon
so has part: feature:8239845-8239867:1:exon
so has part: feature:8297919-8298038:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8354876:1:exon

XP_032902389.1
type: Protein
SIO_000068: ncbiprotein

position:8134544:1
position: 8134544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8354876:1
position: 8354876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8134544-8134567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8139427-8139524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8156683-8156758:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8173706-8173750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8219054-8219116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8234693-8234767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8236501-8236696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8239845-8239867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8297919-8298038:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8314068-8314121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8314953-8315105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8316330-8316459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8319696-8319856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8324594-8324670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8338178-8338427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8339566-8339813:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8341950-8342097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8345544-8345694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8353571-8353647:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8354769-8354876:1:exon

LOC116989284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 4 isoform X4
translation: MYPQGRHPAPHQPGQSFKFTVVETCDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMVCTQYYEMSYGLNIEMHKQAEIVKRLSTICAQIIPFLSQEHQQQVVQAIERAKQVTMAELNAIIGQQQLQHLSHHAPPIPLTPHPSGLQVAGIPSLGGGSGLLALSSALGVHAHLAMKEDKNHLDMEHHRDGDRDASRSKSVSPSDSLRAEDRHRGSLDYTTEGKKRKCDDKDSDSDGDKSDDNLVVDVSNEDPSSPQGSPSHSPRGNGLDKFHLLRKDAPSSPASLASSRSTPPTKSKEPGLNEKATTPVSKSITPTPRSDSLTPGPSSASRLRQMSNKSSVDALGLRSPLTVPGPYATPFGMMAHAGMNGELASPGAYASLHISPQMSSAAVYCRSPMVAFDSHPHMRASGLPPSLPTIPGGKPAYSFHVSADSQMQPVPFPPDALVGPGIPRHARQINNLNHGEVVCAVTVSNPMRHVYTGGKGCVKVWDISQPGSKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFACCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8134544..8134567,8139427..8139524,8156683..8156758,8173706..8173750,8219054..8219116,8234693..8234767,8236501..8236696,8239845..8239867,8297919..8298026,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8354876)
location: region:8134544-8354876:1
so has part: feature:8134544-8134567:1:exon
so has part: feature:8139427-8139524:1:exon
so has part: feature:8156683-8156758:1:exon
so has part: feature:8173706-8173750:1:exon
so has part: feature:8219054-8219116:1:exon
so has part: feature:8234693-8234767:1:exon
so has part: feature:8236501-8236696:1:exon
so has part: feature:8239845-8239867:1:exon
so has part: feature:8297919-8298026:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8354876:1:exon

XP_032902392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8134544-8134567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8139427-8139524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8156683-8156758:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8173706-8173750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8219054-8219116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8234693-8234767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8236501-8236696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8239845-8239867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8297919-8298026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8314068-8314121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8314953-8315105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8316330-8316459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8319696-8319856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8324594-8324670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8338178-8338427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8339566-8339813:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8341950-8342097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8345544-8345694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8353571-8353647:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8354769-8354876:1:exon

LOC116989284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 4 isoform X2
translation: MYPQGRHPAPHQPGQSFKFTVVETCDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMVCTQYYEMSYGLNIEMHKQAEIVKRLSTICAQIIPFLSQEHQQQVVQAIERAKQVTMAELNAIIGQQLQHLSHHAPPIPLTPHPSGLQVAGIPSLGGGSGLLALSSALGVHAHLAMKEDKNHLDMEHHRDGDRDASRSKSVSPSDSLRAEDRHRGSLDYTTEGKKRKCDDKDSVGHYDSDGDKSDDNLVVDVSNEDPSSPQGSPSHSPRGNGLDKFHLLRKDAPSSPASLASSRSTPPTKSKEPGLNEKATTPVSKSITPTPRSDSLTPGPSSASRLRQMSNKSSVDALGLRSPLTVPGPYATPFGMMAHAGMNGELASPGAYASLHISPQMSSAAVYCRSPMVAFDSHPHMRASGLPPSLPTIPGGKPAYSFHVSADSQMQPVPFPPDALVGPGIPRHARQINNLNHGEVVCAVTVSNPMRHVYTGGKGCVKVWDISQPGSKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFACCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8134544..8134567,8139427..8139524,8156683..8156758,8173706..8173750,8219054..8219116,8234693..8234767,8236504..8236696,8239845..8239867,8297919..8298038,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8354876)
location: region:8134544-8354876:1
so has part: feature:8134544-8134567:1:exon
so has part: feature:8139427-8139524:1:exon
so has part: feature:8156683-8156758:1:exon
so has part: feature:8173706-8173750:1:exon
so has part: feature:8219054-8219116:1:exon
so has part: feature:8234693-8234767:1:exon
so has part: feature:8236504-8236696:1:exon
so has part: feature:8239845-8239867:1:exon
so has part: feature:8297919-8298038:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8354876:1:exon

XP_032902390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8134544-8134567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8139427-8139524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8156683-8156758:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8173706-8173750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8219054-8219116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8234693-8234767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8236504-8236696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8239845-8239867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8297919-8298038:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8314068-8314121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8314953-8315105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8316330-8316459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8319696-8319856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8324594-8324670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8338178-8338427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8339566-8339813:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8341950-8342097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8345544-8345694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8353571-8353647:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8354769-8354876:1:exon

LOC116989284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 4 isoform X6
translation: MYPQGRHPAPHQPGQSFKFTVVETCDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMVCTQYYEMSYGLNIEMHKQAEIVKRLSTICAQIIPFLSQEHQQQVVQAIERAKQVTMAELNAIIGQQLQHLSHHAPPIPLTPHPSGLQVAGIPSLGGGSGLLALSSALGVHAHLAMKEDKNHLDMEHHRDGDRDASRSKSVSPSDSLRAEDRHRGSLDYTTEGKKRKCDDKDSDSDGDKSDDNLVVDVSNEDPSSPQGSPSHSPRGNGLDKFHLLRKDAPSSPASLASSRSTPPTKSKEPGLNEKATTPVSKSITPTPRSDSLTPGPSSASRLRQMSNKSSVDALGLRSPLTVPGPYATPFGMMAHAGMNGELASPGAYASLHISPQMSSAAVYCRSPMVAFDSHPHMRASGLPPSLPTIPGGKPAYSFHVSADSQMQPVPFPPDALVGPGIPRHARQINNLNHGEVVCAVTVSNPMRHVYTGGKGCVKVWDISQPGSKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFACCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8134544..8134567,8139427..8139524,8156683..8156758,8173706..8173750,8219054..8219116,8234693..8234767,8236504..8236696,8239845..8239867,8297919..8298026,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8354876)
location: region:8134544-8354876:1
so has part: feature:8134544-8134567:1:exon
so has part: feature:8139427-8139524:1:exon
so has part: feature:8156683-8156758:1:exon
so has part: feature:8173706-8173750:1:exon
so has part: feature:8219054-8219116:1:exon
so has part: feature:8234693-8234767:1:exon
so has part: feature:8236504-8236696:1:exon
so has part: feature:8239845-8239867:1:exon
so has part: feature:8297919-8298026:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8354876:1:exon

XP_032902395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8134544-8134567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8139427-8139524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8156683-8156758:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8173706-8173750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8219054-8219116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8234693-8234767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8236504-8236696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8239845-8239867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8297919-8298026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8314068-8314121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8314953-8315105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8316330-8316459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8319696-8319856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8324594-8324670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8338178-8338427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8339566-8339813:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8341950-8342097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8345544-8345694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8353571-8353647:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8354769-8354876:1:exon

LOC116989284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 4 isoform X7
translation: MYPQGRHPAPHQPGQSFKFTVVETCDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMVCTQYYEMSYGLNIEMHKQAEIVKRLSTICAQIIPFLSQEQQQLQHLSHHAPPIPLTPHPSGLQVAGIPSLGGGSGLLALSSALGVHAHLAMKEDKNHLDMEHHRDGDRDASRSKSVSPSDSLRAEDRHRGSLDYTTEGKKRKCDDKDSVGHYDSDGDKSDDNLVVDVSNEDPSSPQGSPSHSPRGNGLDKFHLLRKDAPSSPASLASSRSTPPTKSKEPGLNEKATTPVSKSITPTPRSDSLTPGPSSASRLRQMSNKSSVDALGLRSPLTVPGPYATPFGMMAHAGMNGELASPGAYASLHISPQMSSAAVYCRSPMVAFDSHPHMRASGLPPSLPTIPGGKPAYSFHVSADSQMQPVPFPPDALVGPGIPRHARQINNLNHGEVVCAVTVSNPMRHVYTGGKGCVKVWDISQPGSKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFACCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8134544..8134567,8139427..8139524,8156683..8156758,8173706..8173750,8219054..8219116,8236501..8236696,8239845..8239867,8297919..8298038,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8354876)
location: region:8134544-8354876:1
so has part: feature:8134544-8134567:1:exon
so has part: feature:8139427-8139524:1:exon
so has part: feature:8156683-8156758:1:exon
so has part: feature:8173706-8173750:1:exon
so has part: feature:8219054-8219116:1:exon
so has part: feature:8236501-8236696:1:exon
so has part: feature:8239845-8239867:1:exon
so has part: feature:8297919-8298038:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8354876:1:exon

XP_032902396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8134544-8134567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8139427-8139524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8156683-8156758:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8173706-8173750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8219054-8219116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8236501-8236696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8239845-8239867:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8297919-8298038:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8314068-8314121:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8314953-8315105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8316330-8316459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8319696-8319856:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8324594-8324670:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8338178-8338427:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8339566-8339813:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8341950-8342097:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8345544-8345694:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8353571-8353647:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8354769-8354876:1:exon

LOC116989284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 4 isoform X3
translation: MYPQGRHPAPHQPGQSFKFTVVETCDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLSTICAQIIPFLSQEHQQQVVQAIERAKQVTMAELNAIIGQQQLQHLSHHAPPIPLTPHPSGLQVAGIPSLGGGSGLLALSSALGVHAHLAMKEDKNHLDMEHHRDGDRDASRSKSVSPSDSLRAEDRHRGSLDYTTEGKKRKCDDKDSVGHYDSDGDKSDDNLVVDVSNEDPSSPQGSPSHSPRGNGLDKFHLLRKDAPSSPASLASSRSTPPTKSKEPGLNEKATTPVSKSITPTPRSDSLTPGPSSASRLRQMSNKSSVDALGLRSPLTVPGPYATPFGMMAHAGMNGELASPGAYASLHISPQMSSAAVYCRSPMVAFDSHPHMRASGLPPSLPTIPGGKPAYSFHVSADSQMQPVPFPPDALVGPGIPRHARQINNLNHGEVVCAVTVSNPMRHVYTGGKGCVKVWDISQPGSKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFACCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8134544..8134567,8139427..8139524,8156683..8156746,8173706..8173750,8219054..8219116,8234693..8234767,8236501..8236696,8239845..8239867,8297919..8298038,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8354876)
location: region:8134544-8354876:1
so has part: feature:8134544-8134567:1:exon
so has part: feature:8139427-8139524:1:exon
so has part: feature:8156683-8156746:1:exon
so has part: feature:8173706-8173750:1:exon
so has part: feature:8219054-8219116:1:exon
so has part: feature:8234693-8234767:1:exon
so has part: feature:8236501-8236696:1:exon
so has part: feature:8239845-8239867:1:exon
so has part: feature:8297919-8298038:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8354876:1:exon

XP_032902391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8134544-8134567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8139427-8139524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8156683-8156746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8173706-8173750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8219054-8219116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8234693-8234767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8236501-8236696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8239845-8239867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8297919-8298038:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8314068-8314121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8314953-8315105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8316330-8316459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8319696-8319856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8324594-8324670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8338178-8338427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8339566-8339813:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8341950-8342097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8345544-8345694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8353571-8353647:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8354769-8354876:1:exon

LOC116989284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 4 isoform X5
translation: MYPQGRHPAPHQPGQSFKFTVVETCDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLSTICAQIIPFLSQEHQQQVVQAIERAKQVTMAELNAIIGQQLQHLSHHAPPIPLTPHPSGLQVAGIPSLGGGSGLLALSSALGVHAHLAMKEDKNHLDMEHHRDGDRDASRSKSVSPSDSLRAEDRHRGSLDYTTEGKKRKCDDKDSVGHYDSDGDKSDDNLVVDVSNEDPSSPQGSPSHSPRGNGLDKFHLLRKDAPSSPASLASSRSTPPTKSKEPGLNEKATTPVSKSITPTPRSDSLTPGPSSASRLRQMSNKSSVDALGLRSPLTVPGPYATPFGMMAHAGMNGELASPGAYASLHISPQMSSAAVYCRSPMVAFDSHPHMRASGLPPSLPTIPGGKPAYSFHVSADSQMQPVPFPPDALVGPGIPRHARQINNLNHGEVVCAVTVSNPMRHVYTGGKGCVKVWDISQPGSKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFACCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8134544..8134567,8139427..8139524,8156683..8156746,8173706..8173750,8219054..8219116,8234693..8234767,8236504..8236696,8239845..8239867,8297919..8298038,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8354876)
location: region:8134544-8354876:1
so has part: feature:8134544-8134567:1:exon
so has part: feature:8139427-8139524:1:exon
so has part: feature:8156683-8156746:1:exon
so has part: feature:8173706-8173750:1:exon
so has part: feature:8219054-8219116:1:exon
so has part: feature:8234693-8234767:1:exon
so has part: feature:8236504-8236696:1:exon
so has part: feature:8239845-8239867:1:exon
so has part: feature:8297919-8298038:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8354876:1:exon

XP_032902393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8134544-8134567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8139427-8139524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8156683-8156746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8173706-8173750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8219054-8219116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8234693-8234767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8236504-8236696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8239845-8239867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8297919-8298038:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8314068-8314121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8314953-8315105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8316330-8316459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8319696-8319856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8324594-8324670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8338178-8338427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8339566-8339813:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8341950-8342097:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8345544-8345694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8353571-8353647:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8354769-8354876:1:exon

LOC116989284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989284
product: transducin-like enhancer protein 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033046506.1
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8262967..8263167,8297919..8298038,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8356379)
location: region:8262967-8356379:1
so has part: feature:8262967-8263167:1:exon
so has part: feature:8297919-8298038:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8356379:1:exon

position:8262967:1
position: 8262967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8262967-8263167:1:exon

position:8263167:1
position: 8263167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8297919-8298038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8314068-8314121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8314953-8315105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8316330-8316459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8319696-8319856:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8324594-8324670:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8338178-8338427:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8339566-8339813:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8341950-8342097:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8345544-8345694:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8353571-8353647:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8354769-8356379:1:exon

LOC116989284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 4 isoform X8
translation: MQLARGDVRFAFQSKWTRSVTLRKISRVQHTACIDGELVPVSEQTAHTRRRGQDRSLAQKLQSKSVSPSDSLRAEDRHRGSLDYTTEGKKRKCDDKDSVGHYDSDGDKSDDNLVVDVSNEDPSSPQGSPSHSPRGNGLDKFHLLRKDAPSSPASLASSRSTPPTKSKEPGLNEKATTPVSKSITPTPRSDSLTPGPSSASRLRQMSNKSSVDALGLRSPLTVPGPYATPFGMMAHAGMNGELASPGAYASLHISPQMSSAAVYCRSPMVAFDSHPHMRASGLPPSLPTIPGGKPAYSFHVSADSQMQPVPFPPDALVGPGIPRHARQINNLNHGEVVCAVTVSNPMRHVYTGGKGCVKVWDISQPGSKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRCWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFACCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
SIO_010081: LOC116989284
subclass of: SO_0000673
so part of: LOC116989284
location: join(8262982..8263167,8297919..8298038,8314068..8314121,8314953..8315105,8316330..8316459,8319696..8319856,8324594..8324670,8338178..8338427,8339566..8339813,8341950..8342097,8345544..8345694,8353571..8353647,8354769..8354876)
location: region:8262982-8354876:1
so has part: feature:8262982-8263167:1:exon
so has part: feature:8297919-8298038:1:exon
so has part: feature:8314068-8314121:1:exon
so has part: feature:8314953-8315105:1:exon
so has part: feature:8316330-8316459:1:exon
so has part: feature:8319696-8319856:1:exon
so has part: feature:8324594-8324670:1:exon
so has part: feature:8338178-8338427:1:exon
so has part: feature:8339566-8339813:1:exon
so has part: feature:8341950-8342097:1:exon
so has part: feature:8345544-8345694:1:exon
so has part: feature:8353571-8353647:1:exon
so has part: feature:8354769-8354876:1:exon

XP_032902397.1
type: Protein
SIO_000068: ncbiprotein

position:8262982:1
position: 8262982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8262982-8263167:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8297919-8298038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8314068-8314121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8314953-8315105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8316330-8316459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8319696-8319856:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8324594-8324670:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8338178-8338427:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8339566-8339813:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8341950-8342097:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8345544-8345694:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8353571-8353647:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8354769-8354876:1:exon

LOC116989285
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989285
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8366524..8557572)
location: region:8366524-8557572:-1
so has part: feature:8366524-8557572:-1:exon
subclass of: SO_0000010

116989285
type: Gene
SIO_000068: ncbigene

position:8366524:-1
position: 8366524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8557572:-1
position: 8557572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8366524-8557572:-1:exon

LOC116989285
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989285
product: transducin-like enhancer protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033046509.1
SIO_010081: LOC116989285
subclass of: SO_0000673
so part of: LOC116989285
location: complement(join(8366524..8368318,8371440..8371516,8379860..8380010,8382004..8382151,8386185..8386432,8394933..8395182,8396866..8396942,8400942..8401117,8402236..8402365,8404252..8404407,8405400..8405453,8418752..8418856,8440201..8440299,8447164..8447180,8453532..8453730,8461622..8461684,8510195..8510239,8523238..8523301,8538183..8538295,8557151..8557572))
location: region:8366524-8557572:-1
so has part: feature:8557151-8557572:-1:exon
so has part: feature:8538183-8538295:-1:exon
so has part: feature:8523238-8523301:-1:exon
so has part: feature:8510195-8510239:-1:exon
so has part: feature:8461622-8461684:-1:exon
so has part: feature:8453532-8453730:-1:exon
so has part: feature:8447164-8447180:-1:exon
so has part: feature:8440201-8440299:-1:exon
so has part: feature:8418752-8418856:-1:exon
so has part: feature:8405400-8405453:-1:exon
so has part: feature:8404252-8404407:-1:exon
so has part: feature:8402236-8402365:-1:exon
so has part: feature:8400942-8401117:-1:exon
so has part: feature:8396866-8396942:-1:exon
so has part: feature:8394933-8395182:-1:exon
so has part: feature:8386185-8386432:-1:exon
so has part: feature:8382004-8382151:-1:exon
so has part: feature:8379860-8380010:-1:exon
so has part: feature:8371440-8371516:-1:exon
so has part: feature:8366524-8368318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8557151-8557572:-1:exon

position:8557151:-1
position: 8557151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8538183-8538295:-1:exon

position:8538183:-1
position: 8538183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8538295:-1
position: 8538295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8523238-8523301:-1:exon

position:8523238:-1
position: 8523238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8523301:-1
position: 8523301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8510195-8510239:-1:exon

position:8510195:-1
position: 8510195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8510239:-1
position: 8510239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8461622-8461684:-1:exon

position:8461622:-1
position: 8461622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8461684:-1
position: 8461684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8453532-8453730:-1:exon

position:8453532:-1
position: 8453532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8453730:-1
position: 8453730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8447164-8447180:-1:exon

position:8447164:-1
position: 8447164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8447180:-1
position: 8447180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8440201-8440299:-1:exon

position:8440201:-1
position: 8440201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8440299:-1
position: 8440299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8418752-8418856:-1:exon

position:8418752:-1
position: 8418752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8418856:-1
position: 8418856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8405400-8405453:-1:exon

position:8405400:-1
position: 8405400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8405453:-1
position: 8405453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8404252-8404407:-1:exon

position:8404252:-1
position: 8404252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8404407:-1
position: 8404407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8402236-8402365:-1:exon

position:8402236:-1
position: 8402236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8402365:-1
position: 8402365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8400942-8401117:-1:exon

position:8400942:-1
position: 8400942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8401117:-1
position: 8401117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8396866-8396942:-1:exon

position:8396866:-1
position: 8396866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8396942:-1
position: 8396942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8394933-8395182:-1:exon

position:8394933:-1
position: 8394933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8395182:-1
position: 8395182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8386185-8386432:-1:exon

position:8386185:-1
position: 8386185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8386432:-1
position: 8386432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8382004-8382151:-1:exon

position:8382004:-1
position: 8382004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8382151:-1
position: 8382151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8379860-8380010:-1:exon

position:8379860:-1
position: 8379860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8380010:-1
position: 8380010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8371440-8371516:-1:exon

position:8371440:-1
position: 8371440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8371516:-1
position: 8371516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8366524-8368318:-1:exon

position:8368318:-1
position: 8368318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989285
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989285
product: transducin-like enhancer protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033046508.1
SIO_010081: LOC116989285
subclass of: SO_0000673
so part of: LOC116989285
location: complement(join(8366524..8368318,8371440..8371516,8379860..8380010,8382004..8382151,8386185..8386432,8394933..8395182,8396866..8396942,8400942..8401117,8402236..8402365,8404252..8404407,8405400..8405453,8418752..8418856,8447164..8447180,8453532..8453730,8460208..8460312,8461622..8461684,8510195..8510239,8523238..8523301,8538183..8538295,8557151..8557570))
location: region:8366524-8557570:-1
so has part: feature:8557151-8557570:-1:exon
so has part: feature:8538183-8538295:-1:exon
so has part: feature:8523238-8523301:-1:exon
so has part: feature:8510195-8510239:-1:exon
so has part: feature:8461622-8461684:-1:exon
so has part: feature:8460208-8460312:-1:exon
so has part: feature:8453532-8453730:-1:exon
so has part: feature:8447164-8447180:-1:exon
so has part: feature:8418752-8418856:-1:exon
so has part: feature:8405400-8405453:-1:exon
so has part: feature:8404252-8404407:-1:exon
so has part: feature:8402236-8402365:-1:exon
so has part: feature:8400942-8401117:-1:exon
so has part: feature:8396866-8396942:-1:exon
so has part: feature:8394933-8395182:-1:exon
so has part: feature:8386185-8386432:-1:exon
so has part: feature:8382004-8382151:-1:exon
so has part: feature:8379860-8380010:-1:exon
so has part: feature:8371440-8371516:-1:exon
so has part: feature:8366524-8368318:-1:exon

position:8557570:-1
position: 8557570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8557151-8557570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8538183-8538295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8523238-8523301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8510195-8510239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8461622-8461684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8460208-8460312:-1:exon

position:8460208:-1
position: 8460208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8460312:-1
position: 8460312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8453532-8453730:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8447164-8447180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8418752-8418856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8405400-8405453:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8404252-8404407:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8402236-8402365:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8400942-8401117:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8396866-8396942:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8394933-8395182:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8386185-8386432:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8382004-8382151:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8379860-8380010:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8371440-8371516:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8366524-8368318:-1:exon

LOC116989285
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989285
product: transducin-like enhancer protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033046507.1
SIO_010081: LOC116989285
subclass of: SO_0000673
so part of: LOC116989285
location: complement(join(8366524..8368318,8371440..8371516,8379860..8380010,8382004..8382151,8386185..8386432,8394933..8395182,8396866..8396942,8400942..8401117,8402236..8402365,8404252..8404407,8405400..8405453,8418752..8418856,8440201..8440299,8447164..8447180,8453532..8453730,8460208..8460312,8461622..8461684,8510195..8510239,8523238..8523301,8538183..8538295,8557151..8557569))
location: region:8366524-8557569:-1
so has part: feature:8557151-8557569:-1:exon
so has part: feature:8538183-8538295:-1:exon
so has part: feature:8523238-8523301:-1:exon
so has part: feature:8510195-8510239:-1:exon
so has part: feature:8461622-8461684:-1:exon
so has part: feature:8460208-8460312:-1:exon
so has part: feature:8453532-8453730:-1:exon
so has part: feature:8447164-8447180:-1:exon
so has part: feature:8440201-8440299:-1:exon
so has part: feature:8418752-8418856:-1:exon
so has part: feature:8405400-8405453:-1:exon
so has part: feature:8404252-8404407:-1:exon
so has part: feature:8402236-8402365:-1:exon
so has part: feature:8400942-8401117:-1:exon
so has part: feature:8396866-8396942:-1:exon
so has part: feature:8394933-8395182:-1:exon
so has part: feature:8386185-8386432:-1:exon
so has part: feature:8382004-8382151:-1:exon
so has part: feature:8379860-8380010:-1:exon
so has part: feature:8371440-8371516:-1:exon
so has part: feature:8366524-8368318:-1:exon

position:8557569:-1
position: 8557569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8557151-8557569:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8538183-8538295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8523238-8523301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8510195-8510239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8461622-8461684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8460208-8460312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8453532-8453730:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8447164-8447180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8440201-8440299:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8418752-8418856:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8405400-8405453:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8404252-8404407:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8402236-8402365:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8400942-8401117:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8396866-8396942:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8394933-8395182:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8386185-8386432:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8382004-8382151:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8379860-8380010:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8371440-8371516:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8366524-8368318:-1:exon

LOC116989285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989285
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 1 isoform X3
translation: MFPHNRSSVPPSAAPTAASQTLKFTFPETLDRIKEEFQFLQAQYHSLKMECEKLASEKTEMQRHYVMYYEMSYGLNLEMHKQTEIAKRLNVICAQLLPYLSQEHHFQPQQLSHHASPFPLALHPTGLQLPAMSSIGASSGLLALSNALAAHPQFALKEDKNHQEQEHRRDRDQGSEAETSREMSDAKARRHRCWKSERRTESAEDSQQSSVHSSNGDKPRNSSEYPIHLKKKKTEERDSVNDYDSDDDKSDDNLVVDVSNEEPSSPRSSPPQAAHENGLEKLHVRRKTQVNSPTSLVTTSCTPPPLKSKEPVANEKSSTPGLKSSVPPSRSDSATPSTSGTSQHCSAAGKAGADPLALGLKTPLSVQGAFPVPFGMVHTAVNGGIAGANAYGGLHFASPQLNGGATASTFGRSSVAGFEHHTHKRAAGLPGSLSAATAGKPAYSFHVGADRQMQPVAFPTDALTGTGIPRHARQINNLPHGEVVCAVAVSNFTKHVYTGGKGCVKVWDISQPGNRSPVSQLDCLNRDNYIRTCKLYPDGRNLIVGGEANIISIWDLAAPSPRIKAELESSAPACYALAVSPDAKVCFSCCSDGSIFVWDLHNETIIRQFHGHSDGVSCTDISNDGTKLWTGALDNTVRCWDLREGRQVHQHDFASQIFALGCCPTGGWLAVGTESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRVPYGASIFQSKESSSVLCCDISVDDQYVVTGSGDKKATVYEVIY
SIO_010081: LOC116989285
subclass of: SO_0000673
so part of: LOC116989285
location: complement(join(8368211..8368318,8371440..8371516,8379860..8380010,8382004..8382151,8386185..8386432,8394933..8395182,8396866..8396942,8400942..8401117,8402236..8402365,8404252..8404407,8405400..8405453,8418752..8418856,8440201..8440299,8447164..8447180,8453532..8453730,8461622..8461684,8510195..8510239,8523238..8523301,8538183..8538295,8557151..8557174))
location: region:8368211-8557174:-1
so has part: feature:8557151-8557174:-1:exon
so has part: feature:8538183-8538295:-1:exon
so has part: feature:8523238-8523301:-1:exon
so has part: feature:8510195-8510239:-1:exon
so has part: feature:8461622-8461684:-1:exon
so has part: feature:8453532-8453730:-1:exon
so has part: feature:8447164-8447180:-1:exon
so has part: feature:8440201-8440299:-1:exon
so has part: feature:8418752-8418856:-1:exon
so has part: feature:8405400-8405453:-1:exon
so has part: feature:8404252-8404407:-1:exon
so has part: feature:8402236-8402365:-1:exon
so has part: feature:8400942-8401117:-1:exon
so has part: feature:8396866-8396942:-1:exon
so has part: feature:8394933-8395182:-1:exon
so has part: feature:8386185-8386432:-1:exon
so has part: feature:8382004-8382151:-1:exon
so has part: feature:8379860-8380010:-1:exon
so has part: feature:8371440-8371516:-1:exon
so has part: feature:8368211-8368318:-1:exon

XP_032902400.1
type: Protein
SIO_000068: ncbiprotein

position:8368211:-1
position: 8368211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8557174:-1
position: 8557174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8557151-8557174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8538183-8538295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8523238-8523301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8510195-8510239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8461622-8461684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8453532-8453730:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8447164-8447180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8440201-8440299:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8418752-8418856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8405400-8405453:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8404252-8404407:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8402236-8402365:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8400942-8401117:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8396866-8396942:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8394933-8395182:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8386185-8386432:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8382004-8382151:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8379860-8380010:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8371440-8371516:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8368211-8368318:-1:exon

LOC116989285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989285
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 1 isoform X2
translation: MFPHNRSSVPPSAAPTAASQTLKFTFPETLDRIKEEFQFLQAQYHSLKMECEKLASEKTEMQRHYVMYYEMSYGLNLEMHKQTEIAKRLNVICAQLLPYLSQEHQQQVIQTIERAKQVTMGELNAAIGVRGLPILPPPHHFQPQQLSHHASPFPLALHPTGLQLPAMSSIGASSGLLALSNALAAHPQFALKEDKNHQEQEHRRDRDQGSSSVHSSNGDKPRNSSEYPIHLKKKKTEERDSVNDYDSDDDKSDDNLVVDVSNEEPSSPRSSPPQAAHENGLEKLHVRRKTQVNSPTSLVTTSCTPPPLKSKEPVANEKSSTPGLKSSVPPSRSDSATPSTSGTSQHCSAAGKAGADPLALGLKTPLSVQGAFPVPFGMVHTAVNGGIAGANAYGGLHFASPQLNGGATASTFGRSSVAGFEHHTHKRAAGLPGSLSAATAGKPAYSFHVGADRQMQPVAFPTDALTGTGIPRHARQINNLPHGEVVCAVAVSNFTKHVYTGGKGCVKVWDISQPGNRSPVSQLDCLNRDNYIRTCKLYPDGRNLIVGGEANIISIWDLAAPSPRIKAELESSAPACYALAVSPDAKVCFSCCSDGSIFVWDLHNETIIRQFHGHSDGVSCTDISNDGTKLWTGALDNTVRCWDLREGRQVHQHDFASQIFALGCCPTGGWLAVGTESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRVPYGASIFQSKESSSVLCCDISVDDQYVVTGSGDKKATVYEVIY
SIO_010081: LOC116989285
subclass of: SO_0000673
so part of: LOC116989285
location: complement(join(8368211..8368318,8371440..8371516,8379860..8380010,8382004..8382151,8386185..8386432,8394933..8395182,8396866..8396942,8400942..8401117,8402236..8402365,8404252..8404407,8405400..8405453,8418752..8418856,8447164..8447180,8453532..8453730,8460208..8460312,8461622..8461684,8510195..8510239,8523238..8523301,8538183..8538295,8557151..8557174))
location: region:8368211-8557174:-1
so has part: feature:8557151-8557174:-1:exon
so has part: feature:8538183-8538295:-1:exon
so has part: feature:8523238-8523301:-1:exon
so has part: feature:8510195-8510239:-1:exon
so has part: feature:8461622-8461684:-1:exon
so has part: feature:8460208-8460312:-1:exon
so has part: feature:8453532-8453730:-1:exon
so has part: feature:8447164-8447180:-1:exon
so has part: feature:8418752-8418856:-1:exon
so has part: feature:8405400-8405453:-1:exon
so has part: feature:8404252-8404407:-1:exon
so has part: feature:8402236-8402365:-1:exon
so has part: feature:8400942-8401117:-1:exon
so has part: feature:8396866-8396942:-1:exon
so has part: feature:8394933-8395182:-1:exon
so has part: feature:8386185-8386432:-1:exon
so has part: feature:8382004-8382151:-1:exon
so has part: feature:8379860-8380010:-1:exon
so has part: feature:8371440-8371516:-1:exon
so has part: feature:8368211-8368318:-1:exon

XP_032902399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8557151-8557174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8538183-8538295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8523238-8523301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8510195-8510239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8461622-8461684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8460208-8460312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8453532-8453730:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8447164-8447180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8418752-8418856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8405400-8405453:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8404252-8404407:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8402236-8402365:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8400942-8401117:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8396866-8396942:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8394933-8395182:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8386185-8386432:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8382004-8382151:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8379860-8380010:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8371440-8371516:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8368211-8368318:-1:exon

LOC116989285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989285
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin-like enhancer protein 1 isoform X1
translation: MFPHNRSSVPPSAAPTAASQTLKFTFPETLDRIKEEFQFLQAQYHSLKMECEKLASEKTEMQRHYVMYYEMSYGLNLEMHKQTEIAKRLNVICAQLLPYLSQEHQQQVIQTIERAKQVTMGELNAAIGVRGLPILPPPHHFQPQQLSHHASPFPLALHPTGLQLPAMSSIGASSGLLALSNALAAHPQFALKEDKNHQEQEHRRDRDQGSEAETSREMSDAKARRHRCWKSERRTESAEDSQQSSVHSSNGDKPRNSSEYPIHLKKKKTEERDSVNDYDSDDDKSDDNLVVDVSNEEPSSPRSSPPQAAHENGLEKLHVRRKTQVNSPTSLVTTSCTPPPLKSKEPVANEKSSTPGLKSSVPPSRSDSATPSTSGTSQHCSAAGKAGADPLALGLKTPLSVQGAFPVPFGMVHTAVNGGIAGANAYGGLHFASPQLNGGATASTFGRSSVAGFEHHTHKRAAGLPGSLSAATAGKPAYSFHVGADRQMQPVAFPTDALTGTGIPRHARQINNLPHGEVVCAVAVSNFTKHVYTGGKGCVKVWDISQPGNRSPVSQLDCLNRDNYIRTCKLYPDGRNLIVGGEANIISIWDLAAPSPRIKAELESSAPACYALAVSPDAKVCFSCCSDGSIFVWDLHNETIIRQFHGHSDGVSCTDISNDGTKLWTGALDNTVRCWDLREGRQVHQHDFASQIFALGCCPTGGWLAVGTESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRVPYGASIFQSKESSSVLCCDISVDDQYVVTGSGDKKATVYEVIY
SIO_010081: LOC116989285
subclass of: SO_0000673
so part of: LOC116989285
location: complement(join(8368211..8368318,8371440..8371516,8379860..8380010,8382004..8382151,8386185..8386432,8394933..8395182,8396866..8396942,8400942..8401117,8402236..8402365,8404252..8404407,8405400..8405453,8418752..8418856,8440201..8440299,8447164..8447180,8453532..8453730,8460208..8460312,8461622..8461684,8510195..8510239,8523238..8523301,8538183..8538295,8557151..8557174))
location: region:8368211-8557174:-1
so has part: feature:8557151-8557174:-1:exon
so has part: feature:8538183-8538295:-1:exon
so has part: feature:8523238-8523301:-1:exon
so has part: feature:8510195-8510239:-1:exon
so has part: feature:8461622-8461684:-1:exon
so has part: feature:8460208-8460312:-1:exon
so has part: feature:8453532-8453730:-1:exon
so has part: feature:8447164-8447180:-1:exon
so has part: feature:8440201-8440299:-1:exon
so has part: feature:8418752-8418856:-1:exon
so has part: feature:8405400-8405453:-1:exon
so has part: feature:8404252-8404407:-1:exon
so has part: feature:8402236-8402365:-1:exon
so has part: feature:8400942-8401117:-1:exon
so has part: feature:8396866-8396942:-1:exon
so has part: feature:8394933-8395182:-1:exon
so has part: feature:8386185-8386432:-1:exon
so has part: feature:8382004-8382151:-1:exon
so has part: feature:8379860-8380010:-1:exon
so has part: feature:8371440-8371516:-1:exon
so has part: feature:8368211-8368318:-1:exon

XP_032902398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8557151-8557174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8538183-8538295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8523238-8523301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8510195-8510239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8461622-8461684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8460208-8460312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8453532-8453730:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8447164-8447180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8440201-8440299:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8418752-8418856:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8405400-8405453:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8404252-8404407:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8402236-8402365:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8400942-8401117:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8396866-8396942:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8394933-8395182:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8386185-8386432:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8382004-8382151:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8379860-8380010:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8371440-8371516:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8368211-8368318:-1:exon

LOC116989286
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989286
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8530839..8537916
location: region:8530839-8537916:1
so has part: feature:8530839-8537916:1:exon
subclass of: SO_0000011

116989286
type: Gene
SIO_000068: ncbigene

position:8530839:1
position: 8530839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8537916:1
position: 8537916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8530839-8537916:1:exon

LOC116989286
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989286
product: uncharacterized LOC116989286
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004416205.1
SIO_010081: LOC116989286
subclass of: SO_0000673
so part of: LOC116989286
location: join(8530839..8530850,8532306..8532307,8537823..8537916)
location: region:8530839-8537916:1
so has part: feature:8530839-8530850:1:exon
so has part: feature:8532306-8532307:1:exon
so has part: feature:8537823-8537916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8530839-8530850:1:exon

position:8530850:1
position: 8530850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8532306-8532307:1:exon

position:8532306:1
position: 8532306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8532307:1
position: 8532307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8537823-8537916:1:exon

position:8537823:1
position: 8537823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

plpp2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: plpp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8679447..8792940)
location: region:8679447-8792940:-1
so has part: feature:8679447-8792940:-1:exon
subclass of: SO_0000010

116989287
type: Gene
SIO_000068: ncbigene

position:8679447:-1
position: 8679447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8792940:-1
position: 8792940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8679447-8792940:-1:exon

plpp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: plpp2
product: phospholipid phosphatase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033046511.1
SIO_010081: plpp2
subclass of: SO_0000673
so part of: plpp2
location: complement(join(8679447..8681408,8685985..8686161,8696104..8696161,8710723..8710997,8713892..8714043,8792470..8792563,8792731..8792940))
location: region:8679447-8792940:-1
so has part: feature:8792731-8792940:-1:exon
so has part: feature:8792470-8792563:-1:exon
so has part: feature:8713892-8714043:-1:exon
so has part: feature:8710723-8710997:-1:exon
so has part: feature:8696104-8696161:-1:exon
so has part: feature:8685985-8686161:-1:exon
so has part: feature:8679447-8681408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8792731-8792940:-1:exon

position:8792731:-1
position: 8792731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8792470-8792563:-1:exon

position:8792470:-1
position: 8792470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8792563:-1
position: 8792563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8713892-8714043:-1:exon

position:8713892:-1
position: 8713892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8714043:-1
position: 8714043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8710723-8710997:-1:exon

position:8710723:-1
position: 8710723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8710997:-1
position: 8710997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8696104-8696161:-1:exon

position:8696104:-1
position: 8696104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8696161:-1
position: 8696161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8685985-8686161:-1:exon

position:8685985:-1
position: 8685985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8686161:-1
position: 8686161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8679447-8681408:-1:exon

position:8681408:-1
position: 8681408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

plpp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: plpp2
product: phospholipid phosphatase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033046510.1
SIO_010081: plpp2
subclass of: SO_0000673
so part of: plpp2
location: complement(join(8679447..8681408,8685985..8686161,8696104..8696161,8710723..8710997,8713892..8714043,8792470..8792563,8792699..8792938))
location: region:8679447-8792938:-1
so has part: feature:8792699-8792938:-1:exon
so has part: feature:8792470-8792563:-1:exon
so has part: feature:8713892-8714043:-1:exon
so has part: feature:8710723-8710997:-1:exon
so has part: feature:8696104-8696161:-1:exon
so has part: feature:8685985-8686161:-1:exon
so has part: feature:8679447-8681408:-1:exon

position:8792938:-1
position: 8792938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8792699-8792938:-1:exon

position:8792699:-1
position: 8792699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8792470-8792563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8713892-8714043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8710723-8710997:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8696104-8696161:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8685985-8686161:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8679447-8681408:-1:exon

plpp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: plpp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid phosphatase 2
translation: MFEKKNIFVLVDLLCLVVASLPFVILSLQAKPRIRGFYCDDDSIKYPYKGDTISHWTMAAVIIPSCIIIIIVGEAIMVRLKHLYSKSEFNNYVAALYKVVGTFVFGAFVSQSLTDIAKYTVGRLRPSFLELCKPNMSLVDCSQYVQLDVCTGSDVDITEARLSFYSGHSSFGMYCMVFLSLYMQVRLKGKWARLLRPTIQFFLLAFAVYVGYTRVSDYRHHWSDVLAGFLQGAIVAILIVRYVSDFYKSRPENLEHSEGSEPERKPNIPLTETEPMNHYGTGHVP
SIO_010081: plpp2
subclass of: SO_0000673
so part of: plpp2
location: complement(join(8681268..8681408,8685985..8686161,8696104..8696161,8710723..8710997,8713892..8714043,8792470..8792524))
location: region:8681268-8792524:-1
so has part: feature:8792470-8792524:-1:exon
so has part: feature:8713892-8714043:-1:exon
so has part: feature:8710723-8710997:-1:exon
so has part: feature:8696104-8696161:-1:exon
so has part: feature:8685985-8686161:-1:exon
so has part: feature:8681268-8681408:-1:exon

XP_032902401.1
type: Protein
SIO_000068: ncbiprotein

position:8681268:-1
position: 8681268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8792524:-1
position: 8792524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8792470-8792524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8713892-8714043:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8710723-8710997:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8696104-8696161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8685985-8686161:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8681268-8681408:-1:exon

plpp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: plpp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid phosphatase 2
translation: MFEKKNIFVLVDLLCLVVASLPFVILSLQAKPRIRGFYCDDDSIKYPYKGDTISHWTMAAVIIPSCIIIIIVGEAIMVRLKHLYSKSEFNNYVAALYKVVGTFVFGAFVSQSLTDIAKYTVGRLRPSFLELCKPNMSLVDCSQYVQLDVCTGSDVDITEARLSFYSGHSSFGMYCMVFLSLYMQVRLKGKWARLLRPTIQFFLLAFAVYVGYTRVSDYRHHWSDVLAGFLQGAIVAILIVRYVSDFYKSRPENLEHSEGSEPERKPNIPLTETEPMNHYGTGHVP
SIO_010081: plpp2
subclass of: SO_0000673
so part of: plpp2
location: complement(join(8681268..8681408,8685985..8686161,8696104..8696161,8710723..8710997,8713892..8714043,8792470..8792524))
location: region:8681268-8792524:-1
so has part: feature:8792470-8792524:-1:exon
so has part: feature:8713892-8714043:-1:exon
so has part: feature:8710723-8710997:-1:exon
so has part: feature:8696104-8696161:-1:exon
so has part: feature:8685985-8686161:-1:exon
so has part: feature:8681268-8681408:-1:exon

XP_032902402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8792470-8792524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8713892-8714043:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8710723-8710997:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8696104-8696161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8685985-8686161:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8681268-8681408:-1:exon

mier2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: mier2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8914127..9003774)
location: region:8914127-9003774:-1
so has part: feature:8914127-9003774:-1:exon
subclass of: SO_0000010

116989289
type: Gene
SIO_000068: ncbigene

position:8914127:-1
position: 8914127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9003774:-1
position: 9003774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8914127-9003774:-1:exon

mier2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: mier2
product: MIER family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033046512.1
SIO_010081: mier2
subclass of: SO_0000673
so part of: mier2
location: complement(join(8914127..8920923,8924004..8924131,8924445..8924572,8928273..8928367,8929762..8929843,8930995..8931146,8933444..8933516,8935872..8935960,8946887..8947010,8949867..8950001,8950979..8951100,8958331..8958418,9003714..9003774))
location: region:8914127-9003774:-1
so has part: feature:9003714-9003774:-1:exon
so has part: feature:8958331-8958418:-1:exon
so has part: feature:8950979-8951100:-1:exon
so has part: feature:8949867-8950001:-1:exon
so has part: feature:8946887-8947010:-1:exon
so has part: feature:8935872-8935960:-1:exon
so has part: feature:8933444-8933516:-1:exon
so has part: feature:8930995-8931146:-1:exon
so has part: feature:8929762-8929843:-1:exon
so has part: feature:8928273-8928367:-1:exon
so has part: feature:8924445-8924572:-1:exon
so has part: feature:8924004-8924131:-1:exon
so has part: feature:8914127-8920923:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9003714-9003774:-1:exon

position:9003714:-1
position: 9003714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8958331-8958418:-1:exon

position:8958331:-1
position: 8958331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8958418:-1
position: 8958418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8950979-8951100:-1:exon

position:8950979:-1
position: 8950979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8951100:-1
position: 8951100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8949867-8950001:-1:exon

position:8949867:-1
position: 8949867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8950001:-1
position: 8950001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8946887-8947010:-1:exon

position:8946887:-1
position: 8946887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8947010:-1
position: 8947010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8935872-8935960:-1:exon

position:8935872:-1
position: 8935872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8935960:-1
position: 8935960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8933444-8933516:-1:exon

position:8933444:-1
position: 8933444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8933516:-1
position: 8933516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8930995-8931146:-1:exon

position:8930995:-1
position: 8930995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8931146:-1
position: 8931146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8929762-8929843:-1:exon

position:8929762:-1
position: 8929762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8929843:-1
position: 8929843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8928273-8928367:-1:exon

position:8928273:-1
position: 8928273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8928367:-1
position: 8928367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8924445-8924572:-1:exon

position:8924445:-1
position: 8924445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8924572:-1
position: 8924572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8924004-8924131:-1:exon

position:8924004:-1
position: 8924004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8924131:-1
position: 8924131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8914127-8920923:-1:exon

position:8920923:-1
position: 8920923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mier2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: mier2
product: MIER family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033046513.1
SIO_010081: mier2
subclass of: SO_0000673
so part of: mier2
location: complement(join(8914127..8920923,8924004..8924131,8924445..8924572,8928273..8928367,8929762..8929843,8930995..8931146,8933444..8933516,8935872..8935960,8946887..8947010,8949867..8950001,8950979..8951100,8958331..8958418,9003561..9003726))
location: region:8914127-9003726:-1
so has part: feature:9003561-9003726:-1:exon
so has part: feature:8958331-8958418:-1:exon
so has part: feature:8950979-8951100:-1:exon
so has part: feature:8949867-8950001:-1:exon
so has part: feature:8946887-8947010:-1:exon
so has part: feature:8935872-8935960:-1:exon
so has part: feature:8933444-8933516:-1:exon
so has part: feature:8930995-8931146:-1:exon
so has part: feature:8929762-8929843:-1:exon
so has part: feature:8928273-8928367:-1:exon
so has part: feature:8924445-8924572:-1:exon
so has part: feature:8924004-8924131:-1:exon
so has part: feature:8914127-8920923:-1:exon

position:9003726:-1
position: 9003726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9003561-9003726:-1:exon

position:9003561:-1
position: 9003561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8958331-8958418:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8950979-8951100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8949867-8950001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8946887-8947010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8935872-8935960:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8933444-8933516:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8930995-8931146:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8929762-8929843:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8928273-8928367:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8924445-8924572:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8924004-8924131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8914127-8920923:-1:exon

mier2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: mier2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 2 isoform X1
translation: MAEASVGRQSPRVVLYRTQNLCSLENRLQSGGAGSMGSADHRFNLADILSHNYTPREEEETPEADKSFEDLERESDVPLEELLALYGYEASDPISEHESEGSSPSELADNLPDMTLDKEQIAKDLLSGEEEDETQSSADDLTPSVTSHEASDLFPHPLRSNSIEDDKELSLTDEDSEEDDSILSNDCKKEIMVGPQYQAPIPPFISKYRQNEKVYDNEDQLLWDPYVLPERRVEEYLYKAVKRSREEKMTETLPEGILVKDSEQALYELVKCNFNAEEALRRLRFNVKVVQDELCAWSEEECRNFEHGLRVHGKNFHLIQANKVRTRSVGECVAYYYMWKKSDRYDYFAQQTKFGKKKYSLHPGVLDYMDQDLDGIESESCSRAPSSPPISSTTSRLDSEQESMLHNSEQQDVELAVCTMNNNSQMFEYCNPEVNGPETNCSMDPICGQGRITPTRDCDAVTLSQAESGFFQLELDQVILDRPALEMSTKKLKMDFSLPKSFNDGLPDNPSNVVFENHTSHIAQAKMSVAVTDFGSIDVGDVNSLLNAHTLHHSATIQSESLSQ
SIO_010081: mier2
subclass of: SO_0000673
so part of: mier2
location: complement(join(8920454..8920923,8924004..8924131,8924445..8924572,8928273..8928367,8929762..8929843,8930995..8931146,8933444..8933516,8935872..8935960,8946887..8947010,8949867..8950001,8950979..8951100,8958331..8958418,9003714..9003722))
location: region:8920454-9003722:-1
so has part: feature:9003714-9003722:-1:exon
so has part: feature:8958331-8958418:-1:exon
so has part: feature:8950979-8951100:-1:exon
so has part: feature:8949867-8950001:-1:exon
so has part: feature:8946887-8947010:-1:exon
so has part: feature:8935872-8935960:-1:exon
so has part: feature:8933444-8933516:-1:exon
so has part: feature:8930995-8931146:-1:exon
so has part: feature:8929762-8929843:-1:exon
so has part: feature:8928273-8928367:-1:exon
so has part: feature:8924445-8924572:-1:exon
so has part: feature:8924004-8924131:-1:exon
so has part: feature:8920454-8920923:-1:exon

XP_032902403.1
type: Protein
SIO_000068: ncbiprotein

position:8920454:-1
position: 8920454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9003722:-1
position: 9003722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9003714-9003722:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8958331-8958418:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8950979-8951100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8949867-8950001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8946887-8947010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8935872-8935960:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8933444-8933516:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8930995-8931146:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8929762-8929843:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8928273-8928367:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8924445-8924572:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8924004-8924131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8920454-8920923:-1:exon

mier2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: mier2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 2 isoform X2
translation: MGSADHRFNLADILSHNYTPREEEETPEADKSFEDLERESDVPLEELLALYGYEASDPISEHESEGSSPSELADNLPDMTLDKEQIAKDLLSGEEEDETQSSADDLTPSVTSHEASDLFPHPLRSNSIEDDKELSLTDEDSEEDDSILSNDCKKEIMVGPQYQAPIPPFISKYRQNEKVYDNEDQLLWDPYVLPERRVEEYLYKAVKRSREEKMTETLPEGILVKDSEQALYELVKCNFNAEEALRRLRFNVKVVQDELCAWSEEECRNFEHGLRVHGKNFHLIQANKVRTRSVGECVAYYYMWKKSDRYDYFAQQTKFGKKKYSLHPGVLDYMDQDLDGIESESCSRAPSSPPISSTTSRLDSEQESMLHNSEQQDVELAVCTMNNNSQMFEYCNPEVNGPETNCSMDPICGQGRITPTRDCDAVTLSQAESGFFQLELDQVILDRPALEMSTKKLKMDFSLPKSFNDGLPDNPSNVVFENHTSHIAQAKMSVAVTDFGSIDVGDVNSLLNAHTLHHSATIQSESLSQ
SIO_010081: mier2
subclass of: SO_0000673
so part of: mier2
location: complement(join(8920454..8920923,8924004..8924131,8924445..8924572,8928273..8928367,8929762..8929843,8930995..8931146,8933444..8933516,8935872..8935960,8946887..8947010,8949867..8950001,8950979..8951092))
location: region:8920454-8951092:-1
so has part: feature:8950979-8951092:-1:exon
so has part: feature:8949867-8950001:-1:exon
so has part: feature:8946887-8947010:-1:exon
so has part: feature:8935872-8935960:-1:exon
so has part: feature:8933444-8933516:-1:exon
so has part: feature:8930995-8931146:-1:exon
so has part: feature:8929762-8929843:-1:exon
so has part: feature:8928273-8928367:-1:exon
so has part: feature:8924445-8924572:-1:exon
so has part: feature:8924004-8924131:-1:exon
so has part: feature:8920454-8920923:-1:exon

XP_032902404.1
type: Protein
SIO_000068: ncbiprotein

position:8951092:-1
position: 8951092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8950979-8951092:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8949867-8950001:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8946887-8947010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8935872-8935960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8933444-8933516:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8930995-8931146:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8929762-8929843:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8928273-8928367:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8924445-8924572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8924004-8924131:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8920454-8920923:-1:exon

LOC116989290
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9003538..9187348
location: region:9003538-9187348:1
so has part: feature:9003538-9187348:1:exon
subclass of: SO_0000010

116989290
type: Gene
SIO_000068: ncbigene

position:9003538:1
position: 9003538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9187348:1
position: 9187348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9003538-9187348:1:exon

LOC116989290
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989290
product: insulin gene enhancer protein ISL-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033046515.1
SIO_010081: LOC116989290
subclass of: SO_0000673
so part of: LOC116989290
location: join(9003538..9003651,9015966..9016025,9035545..9035692,9040810..9040860,9177534..9177723,9178854..9179110,9180834..9181108,9186052..9186186,9186961..9187348)
location: region:9003538-9187348:1
so has part: feature:9003538-9003651:1:exon
so has part: feature:9015966-9016025:1:exon
so has part: feature:9035545-9035692:1:exon
so has part: feature:9040810-9040860:1:exon
so has part: feature:9177534-9177723:1:exon
so has part: feature:9178854-9179110:1:exon
so has part: feature:9180834-9181108:1:exon
so has part: feature:9186052-9186186:1:exon
so has part: feature:9186961-9187348:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9003538-9003651:1:exon

position:9003651:1
position: 9003651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9015966-9016025:1:exon

position:9015966:1
position: 9015966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9016025:1
position: 9016025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9035545-9035692:1:exon

position:9035545:1
position: 9035545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9035692:1
position: 9035692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9040810-9040860:1:exon

position:9040810:1
position: 9040810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9040860:1
position: 9040860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9177534-9177723:1:exon

position:9177534:1
position: 9177534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9177723:1
position: 9177723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9178854-9179110:1:exon

position:9178854:1
position: 9178854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9179110:1
position: 9179110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9180834-9181108:1:exon

position:9180834:1
position: 9180834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9181108:1
position: 9181108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9186052-9186186:1:exon

position:9186052:1
position: 9186052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9186186:1
position: 9186186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9186961-9187348:1:exon

position:9186961:1
position: 9186961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989290
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989290
product: insulin gene enhancer protein ISL-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033046514.1
SIO_010081: LOC116989290
subclass of: SO_0000673
so part of: LOC116989290
location: join(9003538..9003651,9015966..9016025,9040810..9040860,9177534..9177723,9178854..9179110,9180834..9181108,9186052..9186186,9186961..9187348)
location: region:9003538-9187348:1
so has part: feature:9003538-9003651:1:exon
so has part: feature:9015966-9016025:1:exon
so has part: feature:9040810-9040860:1:exon
so has part: feature:9177534-9177723:1:exon
so has part: feature:9178854-9179110:1:exon
so has part: feature:9180834-9181108:1:exon
so has part: feature:9186052-9186186:1:exon
so has part: feature:9186961-9187348:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9003538-9003651:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9015966-9016025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9040810-9040860:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9177534-9177723:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9178854-9179110:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9180834-9181108:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9186052-9186186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9186961-9187348:1:exon

LOC116989290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin gene enhancer protein ISL-1-like
translation: MAIISKEVPLSTCRGCSKHITDPYILRVYPDLEWHAACLKCVECNQNLDESCTCFIKEGKIYCKTDYFSKFSVRCAQCQAGLSSLDLVLRAGDLTYHQRCFCCVACSRQLMPGDEFTLRFDGPYCIQDGGLPDSSLNHKGVFSPLANTSNLYLSEKLKAHRSAAHAAKHSDKITRVRTVLSEQQLLTLRTCYAANPRPDALMKQQLIEMTGLNSRVIRVWFQNKRCKDKKKNVLQKHIDQRDRDKADIRGLIGTLMVAMSPLTQKADLYCSPIEVHKCYTPWEDLKYFTQQVAFSGGRCHSNCSSSEVSAPSSQLPDTLSSEGSQAADL
SIO_010081: LOC116989290
subclass of: SO_0000673
so part of: LOC116989290
location: join(9040845..9040860,9177534..9177723,9178854..9179110,9180834..9181108,9186052..9186186,9186961..9187077)
location: region:9040845-9187077:1
so has part: feature:9040845-9040860:1:exon
so has part: feature:9177534-9177723:1:exon
so has part: feature:9178854-9179110:1:exon
so has part: feature:9180834-9181108:1:exon
so has part: feature:9186052-9186186:1:exon
so has part: feature:9186961-9187077:1:exon

XP_032902405.1
type: Protein
SIO_000068: ncbiprotein

position:9040845:1
position: 9040845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9187077:1
position: 9187077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9040845-9040860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9177534-9177723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9178854-9179110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9180834-9181108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9186052-9186186:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9186961-9187077:1:exon

LOC116989290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin gene enhancer protein ISL-1-like
translation: MAIISKEVPLSTCRGCSKHITDPYILRVYPDLEWHAACLKCVECNQNLDESCTCFIKEGKIYCKTDYFSKFSVRCAQCQAGLSSLDLVLRAGDLTYHQRCFCCVACSRQLMPGDEFTLRFDGPYCIQDGGLPDSSLNHKGVFSPLANTSNLYLSEKLKAHRSAAHAAKHSDKITRVRTVLSEQQLLTLRTCYAANPRPDALMKQQLIEMTGLNSRVIRVWFQNKRCKDKKKNVLQKHIDQRDRDKADIRGLIGTLMVAMSPLTQKADLYCSPIEVHKCYTPWEDLKYFTQQVAFSGGRCHSNCSSSEVSAPSSQLPDTLSSEGSQAADL
SIO_010081: LOC116989290
subclass of: SO_0000673
so part of: LOC116989290
location: join(9040845..9040860,9177534..9177723,9178854..9179110,9180834..9181108,9186052..9186186,9186961..9187077)
location: region:9040845-9187077:1
so has part: feature:9040845-9040860:1:exon
so has part: feature:9177534-9177723:1:exon
so has part: feature:9178854-9179110:1:exon
so has part: feature:9180834-9181108:1:exon
so has part: feature:9186052-9186186:1:exon
so has part: feature:9186961-9187077:1:exon

XP_032902406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9040845-9040860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9177534-9177723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9178854-9179110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9180834-9181108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9186052-9186186:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9186961-9187077:1:exon

LOC116989291
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9249565..9283983
location: region:9249565-9283983:1
so has part: feature:9249565-9283983:1:exon
subclass of: SO_0000010

116989291
type: Gene
SIO_000068: ncbigene

position:9249565:1
position: 9249565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9283983:1
position: 9283983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9249565-9283983:1:exon

LOC116989291
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989291
product: basigin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033046517.1
SIO_010081: LOC116989291
subclass of: SO_0000673
so part of: LOC116989291
location: join(9249565..9249764,9262423..9262770,9263916..9264087,9266992..9267080,9269395..9269531,9271280..9271553,9276255..9276279,9276367..9276449,9282117..9283983)
location: region:9249565-9283983:1
so has part: feature:9249565-9249764:1:exon
so has part: feature:9262423-9262770:1:exon
so has part: feature:9263916-9264087:1:exon
so has part: feature:9266992-9267080:1:exon
so has part: feature:9269395-9269531:1:exon
so has part: feature:9271280-9271553:1:exon
so has part: feature:9276255-9276279:1:exon
so has part: feature:9276367-9276449:1:exon
so has part: feature:9282117-9283983:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9249565-9249764:1:exon

position:9249764:1
position: 9249764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9262423-9262770:1:exon

position:9262423:1
position: 9262423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9262770:1
position: 9262770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9263916-9264087:1:exon

position:9263916:1
position: 9263916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9264087:1
position: 9264087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9266992-9267080:1:exon

position:9266992:1
position: 9266992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9267080:1
position: 9267080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9269395-9269531:1:exon

position:9269395:1
position: 9269395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9269531:1
position: 9269531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9271280-9271553:1:exon

position:9271280:1
position: 9271280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9271553:1
position: 9271553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9276255-9276279:1:exon

position:9276255:1
position: 9276255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9276279:1
position: 9276279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9276367-9276449:1:exon

position:9276367:1
position: 9276367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9276449:1
position: 9276449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9282117-9283983:1:exon

position:9282117:1
position: 9282117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989291
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basigin-like
translation: MAATTTSLLGILLLFFLDCASAYTAGFIKAPLSDVKLIEDSIELHCDAIGKPTPEIQWWAVEGNDTEVMSQLYDGARQQRVNINFIYDLDAKSTISIMNLNIEDTGRYECRASNDPYRNDLKMIPQVKWICSQATVIVIEHPTIVKDPRILEPGENINILRCNLTDPPSPIEGHVWKKDDVEIPATRDSNSSPFMEYKLDAVDAKHSGEYTCHFFTTPAVNDTIFVKAPPGVNAEKKSEHGNEGDYGVLICRSTGFPSVENWSWSRQTKAGIELIVNGTKNFHIKNMGNKTELRISQLGIEQDQGEYFCNATNEIGARVETIHLRVRGRYAAVWPFLGIVAEVIVLVAIIFIYEKRRKPDEISDDDEQGSAPLKSNSSTNHKDQNIRQRNSN
SIO_010081: LOC116989291
subclass of: SO_0000673
so part of: LOC116989291
location: join(9249692..9249764,9262423..9262770,9263916..9264087,9266992..9267080,9269395..9269531,9271280..9271553,9276255..9276279,9276367..9276427)
location: region:9249692-9276427:1
so has part: feature:9249692-9249764:1:exon
so has part: feature:9262423-9262770:1:exon
so has part: feature:9263916-9264087:1:exon
so has part: feature:9266992-9267080:1:exon
so has part: feature:9269395-9269531:1:exon
so has part: feature:9271280-9271553:1:exon
so has part: feature:9276255-9276279:1:exon
so has part: feature:9276367-9276427:1:exon

XP_032902408.1
type: Protein
SIO_000068: ncbiprotein

position:9249692:1
position: 9249692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9276427:1
position: 9276427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9249692-9249764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9262423-9262770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9263916-9264087:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9266992-9267080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9269395-9269531:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9271280-9271553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9276255-9276279:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9276367-9276427:1:exon

LOC116989292
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9334914..9451991
location: region:9334914-9451991:1
so has part: feature:9334914-9451991:1:exon
subclass of: SO_0000010

116989292
type: Gene
SIO_000068: ncbigene

position:9334914:1
position: 9334914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9451991:1
position: 9451991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9334914-9451991:1:exon

LOC116989292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989292
product: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033046518.1
SIO_010081: LOC116989292
subclass of: SO_0000673
so part of: LOC116989292
location: join(9334914..9335674,9356782..9357205,9394130..9394291,9399386..9399604,9436856..9437002,9440597..9440837,9443607..9443771,9449078..9451991)
location: region:9334914-9451991:1
so has part: feature:9334914-9335674:1:exon
so has part: feature:9356782-9357205:1:exon
so has part: feature:9394130-9394291:1:exon
so has part: feature:9399386-9399604:1:exon
so has part: feature:9436856-9437002:1:exon
so has part: feature:9440597-9440837:1:exon
so has part: feature:9443607-9443771:1:exon
so has part: feature:9449078-9451991:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9334914-9335674:1:exon

position:9335674:1
position: 9335674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9356782-9357205:1:exon

position:9356782:1
position: 9356782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9357205:1
position: 9357205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9394130-9394291:1:exon

position:9394130:1
position: 9394130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9394291:1
position: 9394291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9399386-9399604:1:exon

position:9399386:1
position: 9399386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9399604:1
position: 9399604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9436856-9437002:1:exon

position:9436856:1
position: 9436856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9437002:1
position: 9437002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9440597-9440837:1:exon

position:9440597:1
position: 9440597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9440837:1
position: 9440837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9443607-9443771:1:exon

position:9443607:1
position: 9443607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9443771:1
position: 9443771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9449078-9451991:1:exon

position:9449078:1
position: 9449078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1-like
translation: MDRLRPAMRRRLYSLPQQIDPKGSIMDEEEDNEEDSGSKSIRMKAMPSPPGEGGGGRGNSSSESKPGEPKQGEVETVVSMKCNTNGDCRVTRGSQSSISRAELNRGEETKSDMEGGGSTHSGDKKENKVAFSAVPSRKLSQLQPRARNSVSFLKSDGAEQIVAEDGDQLGSQASFLQRQFGAMLQPGVNKFSLRMFGSQKAVEREQERVKSAGAWVIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKEETTTPWIIFNVVSDTFFLMDLVLNFRTGIVFEDNTEIILDPRKIKKTYLKSWFIVDFISSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPNDCWVSLNKMVNDSWSELYSYALFKAMSHMLCIGYGRQAPQSMSDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEDNILGELSEPLREEIVNFNCRKLVASMPLFANADPIFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVHTKGSKAMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSLLLHKVQHDLNSGVFNNRENEIIQEIVKYDREMVQQVELQQPLAMSLTPPFRGGPMFNSQGQLASSSAIATLQQAVAMSFCPSSTGLFIGSVGVQSPRTVRRLHTVQSSASPLSVSPGQQSQTQQQLASVSPSPYPSAVSSPPNQSPLASRTFHYGSQAQSGSQLSLTQQTICSPSHRHAVHKSTQALHTGSLSQEARPLSASQPSLPHNLSQTITSSPPQSTRESTSSMGGQISAQPATGGLQESVRGSVPPRMALTHQMSMGAIFQPPGMPGAQQDSGVPKKDSVVCVMDTDPGKSRLSSNL
SIO_010081: LOC116989292
subclass of: SO_0000673
so part of: LOC116989292
location: join(9335004..9335674,9356782..9357205,9394130..9394291,9399386..9399604,9436856..9437002,9440597..9440837,9443607..9443771,9449078..9450006)
location: region:9335004-9450006:1
so has part: feature:9335004-9335674:1:exon
so has part: feature:9356782-9357205:1:exon
so has part: feature:9394130-9394291:1:exon
so has part: feature:9399386-9399604:1:exon
so has part: feature:9436856-9437002:1:exon
so has part: feature:9440597-9440837:1:exon
so has part: feature:9443607-9443771:1:exon
so has part: feature:9449078-9450006:1:exon

XP_032902409.1
type: Protein
SIO_000068: ncbiprotein

position:9335004:1
position: 9335004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9450006:1
position: 9450006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9335004-9335674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9356782-9357205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9394130-9394291:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9399386-9399604:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9436856-9437002:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9440597-9440837:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9443607-9443771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9449078-9450006:1:exon

LOC116989293
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989293
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9400245..9416800)
location: region:9400245-9416800:-1
so has part: feature:9400245-9416800:-1:exon
subclass of: SO_0000011

116989293
type: Gene
SIO_000068: ncbigene

position:9400245:-1
position: 9400245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9416800:-1
position: 9416800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9400245-9416800:-1:exon

LOC116989293
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989293
product: uncharacterized LOC116989293
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004416206.1
SIO_010081: LOC116989293
subclass of: SO_0000673
so part of: LOC116989293
location: complement(join(9400245..9400313,9402004..9402008,9416761..9416800))
location: region:9400245-9416800:-1
so has part: feature:9416761-9416800:-1:exon
so has part: feature:9402004-9402008:-1:exon
so has part: feature:9400245-9400313:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9416761-9416800:-1:exon

position:9416761:-1
position: 9416761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition