Amblyraja radiata isolate CabotCenter1 chromosome 28, sAmbRad1.1.pri, whole genome shotgun sequence.
type: Entry
definition: Amblyraja radiata isolate CabotCenter1 chromosome 28, sAmbRad1.1.pri, whole genome shotgun sequence.
sequence version: NC_045983.1
sequence date: 2021-04-05
sequence: sequence
division: CON
label: NC_045983.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA610638
dblink: SAMN09948523
keyword: WGS
keyword: RefSeq
source: Amblyraja radiata (thorny skate)
organism: Amblyraja radiata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Amblyraja.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021393.1.\nAssembly name: sAmbRad1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/21. The original whole-genome shotgun project has the\naccession JAAGWR000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 13-JAN-2020\nAssembly Method :: Canu v. 1.7; purge_haplotigs v. bitbucket\n 7.10.2018; scaff10x v. 4.1.0; Bionano\n Solve DLS v. 3.3; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes Illumina polishing v.\n 1.3.1; purge_dups v.\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n gEVAL manual curation v. 2020-01-13; VGP\n assembly pipeline v. 1.5\nAssembly Name :: sAmbRad1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 128.24x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Amblyraja radiata Updated Annotation\n Release 100.20210331\nAnnotation Version :: 100.20210331\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 36421429
topology: linear
so has quality: SO_0000987
location: 1..36421429
location: region:1-36421429:1
RO_0002162: 386614

NC_045983
type: RefSeq
SIO_000068: refseq

PRJNA610638
type: BioProject
SIO_000068: bioproject

SAMN09948523
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36421429:1
position: 36421429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-36421429:1:source
so part of: sequence
organism: Amblyraja radiata
mol type: genomic DNA
isolate: CabotCenter1
chromosome: 28
sex: male
tissue type: testis, liver
country: USA: Gulf of Main
lat lon: 43.1336 N 68.3266 W
collection date: 2017-09-18
collected by: Jeff Kneebone

386614
type: Taxonomy
SIO_000068: taxonomy

LOC116988698
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 94024..289350
location: region:94024-289350:1
so has part: feature:94024-289350:1:exon
subclass of: SO_0000010

116988698
type: Gene
SIO_000068: ncbigene

position:94024:1
position: 94024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289350:1
position: 289350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94024-289350:1:exon

LOC116988698
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988698
product: DPY30 domain-containing protein 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033045544.1
SIO_010081: LOC116988698
subclass of: SO_0000673
so part of: LOC116988698
location: join(94024..94139,94437..94591,94785..94904,286655..286741,288411..288494,289152..289350)
location: region:94024-289350:1
so has part: feature:94024-94139:1:exon
so has part: feature:94437-94591:1:exon
so has part: feature:94785-94904:1:exon
so has part: feature:286655-286741:1:exon
so has part: feature:288411-288494:1:exon
so has part: feature:289152-289350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94024-94139:1:exon

position:94139:1
position: 94139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94437-94591:1:exon

position:94437:1
position: 94437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94591:1
position: 94591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94785-94904:1:exon

position:94785:1
position: 94785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94904:1
position: 94904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:286655-286741:1:exon

position:286655:1
position: 286655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286741:1
position: 286741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:288411-288494:1:exon

position:288411:1
position: 288411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288494:1
position: 288494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:289152-289350:1:exon

position:289152:1
position: 289152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988698
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988698
product: DPY30 domain-containing protein 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033045543.1
SIO_010081: LOC116988698
subclass of: SO_0000673
so part of: LOC116988698
location: join(94038..94122,94437..94591,94785..94904,286655..286741,288411..288494,289152..289350)
location: region:94038-289350:1
so has part: feature:94038-94122:1:exon
so has part: feature:94437-94591:1:exon
so has part: feature:94785-94904:1:exon
so has part: feature:286655-286741:1:exon
so has part: feature:288411-288494:1:exon
so has part: feature:289152-289350:1:exon

position:94038:1
position: 94038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94038-94122:1:exon

position:94122:1
position: 94122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94437-94591:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94785-94904:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286655-286741:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288411-288494:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289152-289350:1:exon

LOC116988698
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DPY30 domain-containing protein 2-like isoform X1
translation: MTYFSPPLVTATSGGAVAFPIATGTSMDSNYLRDVLGSGLAEGLAEVAERRPLDPIDYLAHWLYKYNNNLDIQRQDKEAEAEMGMEIDAYLKERVIQEQLDEELVQIEQLYAAKLLMEEAAAEVRSHSTPSTPKEITAAEWTSQESGALESSSSLVPPGWEGEPDLETVTEEH
SIO_010081: LOC116988698
subclass of: SO_0000673
so part of: LOC116988698
location: join(94053..94122,94437..94591,94785..94904,286655..286741,288411..288494,289152..289157)
location: region:94053-289157:1
so has part: feature:94053-94122:1:exon
so has part: feature:94437-94591:1:exon
so has part: feature:94785-94904:1:exon
so has part: feature:286655-286741:1:exon
so has part: feature:288411-288494:1:exon
so has part: feature:289152-289157:1:exon

XP_032901434.1
type: Protein
SIO_000068: ncbiprotein

position:94053:1
position: 94053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289157:1
position: 289157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94053-94122:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94437-94591:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94785-94904:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286655-286741:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288411-288494:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289152-289157:1:exon

LOC116988698
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988698
product: DPY30 domain-containing protein 2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033045545.1
SIO_010081: LOC116988698
subclass of: SO_0000673
so part of: LOC116988698
location: join(94059..94135,94437..94591,94785..94904,286655..286741,288411..288494,289152..289350)
location: region:94059-289350:1
so has part: feature:94059-94135:1:exon
so has part: feature:94437-94591:1:exon
so has part: feature:94785-94904:1:exon
so has part: feature:286655-286741:1:exon
so has part: feature:288411-288494:1:exon
so has part: feature:289152-289350:1:exon

position:94059:1
position: 94059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94059-94135:1:exon

position:94135:1
position: 94135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94437-94591:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94785-94904:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286655-286741:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288411-288494:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289152-289350:1:exon

LOC116988698
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DPY30 domain-containing protein 2-like isoform X2
translation: MDSNYLRDVLGSGLAEGLAEVAERRPLDPIDYLAHWLYKYNNNLDIQRQDKEAEAEMGMEIDAYLKERVIQEQLDEELVQIEQLYAAKLLMEEAAAEVRSHSTPSTPKEITAAEWTSQESGALESSSSLVPPGWEGEPDLETVTEEH
SIO_010081: LOC116988698
subclass of: SO_0000673
so part of: LOC116988698
location: join(94445..94591,94785..94904,286655..286741,288411..288494,289152..289157)
location: region:94445-289157:1
so has part: feature:94445-94591:1:exon
so has part: feature:94785-94904:1:exon
so has part: feature:286655-286741:1:exon
so has part: feature:288411-288494:1:exon
so has part: feature:289152-289157:1:exon

XP_032901435.1
type: Protein
SIO_000068: ncbiprotein

position:94445:1
position: 94445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94445-94591:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94785-94904:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286655-286741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288411-288494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289152-289157:1:exon

LOC116988698
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DPY30 domain-containing protein 2-like isoform X2
translation: MDSNYLRDVLGSGLAEGLAEVAERRPLDPIDYLAHWLYKYNNNLDIQRQDKEAEAEMGMEIDAYLKERVIQEQLDEELVQIEQLYAAKLLMEEAAAEVRSHSTPSTPKEITAAEWTSQESGALESSSSLVPPGWEGEPDLETVTEEH
SIO_010081: LOC116988698
subclass of: SO_0000673
so part of: LOC116988698
location: join(94445..94591,94785..94904,286655..286741,288411..288494,289152..289157)
location: region:94445-289157:1
so has part: feature:94445-94591:1:exon
so has part: feature:94785-94904:1:exon
so has part: feature:286655-286741:1:exon
so has part: feature:288411-288494:1:exon
so has part: feature:289152-289157:1:exon

XP_032901436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94445-94591:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94785-94904:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286655-286741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288411-288494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289152-289157:1:exon

LOC116988697
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(115048..443271)
location: region:115048-443271:-1
so has part: feature:115048-443271:-1:exon
subclass of: SO_0000010

116988697
type: Gene
SIO_000068: ncbigene

position:115048:-1
position: 115048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443271:-1
position: 443271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115048-443271:-1:exon

LOC116988697
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988697
product: arachidonate 15-lipoxygenase B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033045542.1
SIO_010081: LOC116988697
subclass of: SO_0000673
so part of: LOC116988697
location: complement(join(115048..116034,116686..116856,119680..119780,121403..121524,123233..123402,134000..134086,135986..136189,136923..137063,144049..144221,146107..146180,147576..147698,154034..154135))
location: region:115048-154135:-1
so has part: feature:154034-154135:-1:exon
so has part: feature:147576-147698:-1:exon
so has part: feature:146107-146180:-1:exon
so has part: feature:144049-144221:-1:exon
so has part: feature:136923-137063:-1:exon
so has part: feature:135986-136189:-1:exon
so has part: feature:134000-134086:-1:exon
so has part: feature:123233-123402:-1:exon
so has part: feature:121403-121524:-1:exon
so has part: feature:119680-119780:-1:exon
so has part: feature:116686-116856:-1:exon
so has part: feature:115048-116034:-1:exon

position:154135:-1
position: 154135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154034-154135:-1:exon

position:154034:-1
position: 154034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147576-147698:-1:exon

position:147576:-1
position: 147576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147698:-1
position: 147698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:146107-146180:-1:exon

position:146107:-1
position: 146107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146180:-1
position: 146180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:144049-144221:-1:exon

position:144049:-1
position: 144049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144221:-1
position: 144221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:136923-137063:-1:exon

position:136923:-1
position: 136923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137063:-1
position: 137063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:135986-136189:-1:exon

position:135986:-1
position: 135986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136189:-1
position: 136189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:134000-134086:-1:exon

position:134000:-1
position: 134000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134086:-1
position: 134086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:123233-123402:-1:exon

position:123233:-1
position: 123233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123402:-1
position: 123402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:121403-121524:-1:exon

position:121403:-1
position: 121403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121524:-1
position: 121524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:119680-119780:-1:exon

position:119680:-1
position: 119680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119780:-1
position: 119780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:116686-116856:-1:exon

position:116686:-1
position: 116686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116856:-1
position: 116856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:115048-116034:-1:exon

position:116034:-1
position: 116034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988697
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988697
product: arachidonate 15-lipoxygenase B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033045541.1
SIO_010081: LOC116988697
subclass of: SO_0000673
so part of: LOC116988697
location: complement(join(115809..116034,116686..116856,119680..119780,121403..121524,123233..123402,134000..134086,135986..136189,136923..137063,144049..144221,146107..146180,147576..147698,432393..432473,443062..443271))
location: region:115809-443271:-1
so has part: feature:443062-443271:-1:exon
so has part: feature:432393-432473:-1:exon
so has part: feature:147576-147698:-1:exon
so has part: feature:146107-146180:-1:exon
so has part: feature:144049-144221:-1:exon
so has part: feature:136923-137063:-1:exon
so has part: feature:135986-136189:-1:exon
so has part: feature:134000-134086:-1:exon
so has part: feature:123233-123402:-1:exon
so has part: feature:121403-121524:-1:exon
so has part: feature:119680-119780:-1:exon
so has part: feature:116686-116856:-1:exon
so has part: feature:115809-116034:-1:exon

position:115809:-1
position: 115809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443062-443271:-1:exon

position:443062:-1
position: 443062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:432393-432473:-1:exon

position:432393:-1
position: 432393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432473:-1
position: 432473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:147576-147698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146107-146180:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144049-144221:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136923-137063:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135986-136189:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134000-134086:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:123233-123402:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:121403-121524:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:119680-119780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:116686-116856:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115809-116034:-1:exon

LOC116988697
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arachidonate 15-lipoxygenase B-like isoform X1
translation: MRKRQEEYQWAVYAPGVPKKIQYDKAKDLPRDAKIPLERPMGIFLSIKEAISQLGLGEEKHSQVCLYVCIGSVKDYVMEHWHEDGFFGYQFLNGSNPVLIEQCKEIPEKFPVTEQMVGPFLGPITSLQQEVKKGNIYLVDYEMLGGIKANPEAGHEYLEAPICLLYASPMNQLLPIAIQITQHPGPESPIFLPSDSQCDWRLAKMWVRNADVQVHQLVSHLLRTHLFGEIFGIATLRRLASAHPIFKLLMPHVKYTLHINVIARELLISEGGIFDQAFSSGGTATVEVLQRGLERATYESMCLPDNLAARGVEKILNYYFRDDAQKIWQAINKFTENIVDLYYENDASVQSDTELQAWVKEIFTEGLLAKQSSGFPSSFHSKTELIKFLTMVIFTCSGQHSSVNVGQFDWGSCVQNYPSMMGKPAPTKKDQVTEADIADTLPKGIKKIQVIATTYLLSQPAPFNTKLGTYVEERFTELVARAHITDFQKALLHIEQEITKRNQNLSPPYTYLLPSLIDNSVAV
SIO_010081: LOC116988697
subclass of: SO_0000673
so part of: LOC116988697
location: complement(join(115855..116034,116686..116856,119680..119780,121403..121524,123233..123402,134000..134086,135986..136189,136923..137063,144049..144221,146107..146180,147576..147698,432393..432418))
location: region:115855-432418:-1
so has part: feature:432393-432418:-1:exon
so has part: feature:147576-147698:-1:exon
so has part: feature:146107-146180:-1:exon
so has part: feature:144049-144221:-1:exon
so has part: feature:136923-137063:-1:exon
so has part: feature:135986-136189:-1:exon
so has part: feature:134000-134086:-1:exon
so has part: feature:123233-123402:-1:exon
so has part: feature:121403-121524:-1:exon
so has part: feature:119680-119780:-1:exon
so has part: feature:116686-116856:-1:exon
so has part: feature:115855-116034:-1:exon

XP_032901432.1
type: Protein
SIO_000068: ncbiprotein

position:115855:-1
position: 115855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432418:-1
position: 432418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432393-432418:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147576-147698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146107-146180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144049-144221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136923-137063:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:135986-136189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134000-134086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:123233-123402:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121403-121524:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:119680-119780:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116686-116856:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:115855-116034:-1:exon

LOC116988697
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arachidonate 15-lipoxygenase B-like isoform X2
translation: MRKRQEEYQWAVYAPGVPKKIQYDKAKDLPRDAKIPLERPMGIFLSIKEAISQLGLGEEKHSQVCLYVCIGSVKDYVMEHWHEDGFFGYQFLNGSNPVLIEQCKEIPEKFPVTEQMVGPFLGPITSLQQEVKKGNIYLVDYEMLGGIKANPEAGHEYLEAPICLLYASPMNQLLPIAIQITQHPGPESPIFLPSDSQCDWRLAKMWVRNADVQVHQLVSHLLRTHLFGEIFGIATLRRLASAHPIFKLLMPHVKYTLHINVIARELLISEGGIFDQAFSSGGTATVEVLQRGLERATYESMCLPDNLAARGVEKILNYYFRDDAQKIWQAINKFTENIVDLYYENDASVQSDTELQAWVKEIFTEGLLAKQSSGFPSSFHSKTELIKFLTMVIFTCSGQHSSVNVGQFDWGSCVQNYPSMMGKPAPTKKDQVTEADIADTLPKGIKKIQVIATTYLLSQPAPFNTKLGTYVEERFTELVARAHITDFQKALLHIEQEITKRNQNLSPPYTYLLPSLIDNSVAV
SIO_010081: LOC116988697
subclass of: SO_0000673
so part of: LOC116988697
location: complement(join(115855..116034,116686..116856,119680..119780,121403..121524,123233..123402,134000..134086,135986..136189,136923..137063,144049..144221,146107..146180,147576..147698,154034..154059))
location: region:115855-154059:-1
so has part: feature:154034-154059:-1:exon
so has part: feature:147576-147698:-1:exon
so has part: feature:146107-146180:-1:exon
so has part: feature:144049-144221:-1:exon
so has part: feature:136923-137063:-1:exon
so has part: feature:135986-136189:-1:exon
so has part: feature:134000-134086:-1:exon
so has part: feature:123233-123402:-1:exon
so has part: feature:121403-121524:-1:exon
so has part: feature:119680-119780:-1:exon
so has part: feature:116686-116856:-1:exon
so has part: feature:115855-116034:-1:exon

XP_032901433.1
type: Protein
SIO_000068: ncbiprotein

position:154059:-1
position: 154059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154034-154059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147576-147698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146107-146180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144049-144221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136923-137063:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:135986-136189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134000-134086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:123233-123402:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121403-121524:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:119680-119780:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116686-116856:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:115855-116034:-1:exon

LOC116988700
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 375832..376859
location: region:375832-376859:1
so has part: feature:375832-376859:1:exon
subclass of: SO_0000011

116988700
type: Gene
SIO_000068: ncbigene

position:375832:1
position: 375832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376859:1
position: 376859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375832-376859:1:exon

LOC116988700
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988700
product: uncharacterized LOC116988700
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416037.1
SIO_010081: LOC116988700
subclass of: SO_0000673
so part of: LOC116988700
location: join(375832..375873,376136..376231,376812..376859)
location: region:375832-376859:1
so has part: feature:375832-375873:1:exon
so has part: feature:376136-376231:1:exon
so has part: feature:376812-376859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375832-375873:1:exon

position:375873:1
position: 375873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376136-376231:1:exon

position:376136:1
position: 376136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376231:1
position: 376231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:376812-376859:1:exon

position:376812:1
position: 376812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988701
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 377207..378217
location: region:377207-378217:1
so has part: feature:377207-378217:1:exon
subclass of: SO_0000011

116988701
type: Gene
SIO_000068: ncbigene

position:377207:1
position: 377207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378217:1
position: 378217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377207-378217:1:exon

LOC116988701
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988701
product: uncharacterized LOC116988701
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004416038.1
SIO_010081: LOC116988701
subclass of: SO_0000673
so part of: LOC116988701
location: join(377207..377339,378029..378051,378148..378217)
location: region:377207-378217:1
so has part: feature:377207-377339:1:exon
so has part: feature:378029-378051:1:exon
so has part: feature:378148-378217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377207-377339:1:exon

position:377339:1
position: 377339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:378029-378051:1:exon

position:378029:1
position: 378029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378051:1
position: 378051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:378148-378217:1:exon

position:378148:1
position: 378148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989128
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 460888..461712
location: region:460888-461712:1
so has part: feature:460888-461712:1:exon
subclass of: SO_0000010

116989128
type: Gene
SIO_000068: ncbigene

position:460888:1
position: 460888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461712:1
position: 461712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460888-461712:1:exon

LOC116989128
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989128
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_033046354.1
SIO_010081: LOC116989128
subclass of: SO_0000673
so part of: LOC116989128
location: 460888..461712
location: region:460888-461712:1
so has part: feature:460888-461712:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:460888-461712:1:exon

LOC116989128
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MASADLLVVILDLIMRHIPIVYEEQFIFLESIPVCNIHAVLLYAATDCSVWFTVTFTFDRFVAICCQKFKSKYCTEQTAASVIATVTVLSCLKNVFWYFMLTGVYMLDNLPWFCWGRNGVVSSPAWGAIEFLHYLITPVGAFIVILLLNVLTVRRILVASRARKRLRAQGNVDSCRDPEMESRRKSIIVLLFISGNFILLWAAFVVFSIWMRIYCLWAITEFPPYSVQELGFMLQLLSCCTNTGLYAVTQTKFRQQLKDMVKRPVSFLTKCIIR
SIO_010081: LOC116989128
subclass of: SO_0000673
so part of: LOC116989128
location: 460888..461712
location: region:460888-461712:1
so has part: feature:460888-461712:1:exon

XP_032902245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460888-461712:1:exon

LOC116988703
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(549051..558162)
location: region:549051-558162:-1
so has part: feature:549051-558162:-1:exon
subclass of: SO_0000011

116988703
type: Gene
SIO_000068: ncbigene

position:549051:-1
position: 549051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558162:-1
position: 558162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549051-558162:-1:exon

LOC116988703
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988703
product: uncharacterized LOC116988703
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416040.1
SIO_010081: LOC116988703
subclass of: SO_0000673
so part of: LOC116988703
location: complement(join(549051..549262,550543..550548,558151..558162))
location: region:549051-558162:-1
so has part: feature:558151-558162:-1:exon
so has part: feature:550543-550548:-1:exon
so has part: feature:549051-549262:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:558151-558162:-1:exon

position:558151:-1
position: 558151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550543-550548:-1:exon

position:550543:-1
position: 550543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550548:-1
position: 550548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:549051-549262:-1:exon

position:549262:-1
position: 549262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988702
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 553485..554465
location: region:553485-554465:1
so has part: feature:553485-554465:1:exon
subclass of: SO_0000011

116988702
type: Gene
SIO_000068: ncbigene

position:553485:1
position: 553485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554465:1
position: 554465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553485-554465:1:exon

LOC116988702
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988702
product: uncharacterized LOC116988702
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004416039.1
SIO_010081: LOC116988702
subclass of: SO_0000673
so part of: LOC116988702
location: join(553485..553589,554097..554345,554410..554465)
location: region:553485-554465:1
so has part: feature:553485-553589:1:exon
so has part: feature:554097-554345:1:exon
so has part: feature:554410-554465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553485-553589:1:exon

position:553589:1
position: 553589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:554097-554345:1:exon

position:554097:1
position: 554097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554345:1
position: 554345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:554410-554465:1:exon

position:554410:1
position: 554410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988704
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 604328..610057
location: region:604328-610057:1
so has part: feature:604328-610057:1:exon
subclass of: SO_0000011

116988704
type: Gene
SIO_000068: ncbigene

position:604328:1
position: 604328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610057:1
position: 610057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604328-610057:1:exon

LOC116988704
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988704
product: uncharacterized LOC116988704
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004416041.1
SIO_010081: LOC116988704
subclass of: SO_0000673
so part of: LOC116988704
location: join(604328..604385,607506..607571,609711..610057)
location: region:604328-610057:1
so has part: feature:604328-604385:1:exon
so has part: feature:607506-607571:1:exon
so has part: feature:609711-610057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604328-604385:1:exon

position:604385:1
position: 604385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:607506-607571:1:exon

position:607506:1
position: 607506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607571:1
position: 607571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:609711-610057:1:exon

position:609711:1
position: 609711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988705
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988705
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 611558..616399
location: region:611558-616399:1
so has part: feature:611558-616399:1:exon
subclass of: SO_0000011

116988705
type: Gene
SIO_000068: ncbigene

position:611558:1
position: 611558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616399:1
position: 616399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611558-616399:1:exon

LOC116988705
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988705
product: uncharacterized LOC116988705, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004416043.1
SIO_010081: LOC116988705
subclass of: SO_0000673
so part of: LOC116988705
location: join(611558..611912,612759..612897,615662..615777,616366..616399)
location: region:611558-616399:1
so has part: feature:611558-611912:1:exon
so has part: feature:612759-612897:1:exon
so has part: feature:615662-615777:1:exon
so has part: feature:616366-616399:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:611558-611912:1:exon

position:611912:1
position: 611912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:612759-612897:1:exon

position:612759:1
position: 612759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612897:1
position: 612897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:615662-615777:1:exon

position:615662:1
position: 615662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615777:1
position: 615777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:616366-616399:1:exon

position:616366:1
position: 616366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988705
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988705
product: uncharacterized LOC116988705, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_004416042.1
SIO_010081: LOC116988705
subclass of: SO_0000673
so part of: LOC116988705
location: join(611558..611912,612759..612897,615662..615847)
location: region:611558-615847:1
so has part: feature:611558-611912:1:exon
so has part: feature:612759-612897:1:exon
so has part: feature:615662-615847:1:exon

position:615847:1
position: 615847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611558-611912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:612759-612897:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615662-615847:1:exon

LOC116989129
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989129
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 632377..644903
location: region:632377-644903:1
so has part: feature:632377-644903:1:exon
subclass of: SO_0000010

116989129
type: Gene
SIO_000068: ncbigene

position:632377:1
position: 632377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644903:1
position: 644903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632377-644903:1:exon

LOC116989129
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989129
product: golgin subfamily B member 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033046355.1
SIO_010081: LOC116989129
subclass of: SO_0000673
so part of: LOC116989129
location: join(632377..632543,633132..633249,633826..633878,635974..636106,640061..640092,644805..644903)
location: region:632377-644903:1
so has part: feature:632377-632543:1:exon
so has part: feature:633132-633249:1:exon
so has part: feature:633826-633878:1:exon
so has part: feature:635974-636106:1:exon
so has part: feature:640061-640092:1:exon
so has part: feature:644805-644903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:632377-632543:1:exon

position:632543:1
position: 632543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:633132-633249:1:exon

position:633132:1
position: 633132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633249:1
position: 633249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:633826-633878:1:exon

position:633826:1
position: 633826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633878:1
position: 633878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:635974-636106:1:exon

position:635974:1
position: 635974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636106:1
position: 636106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:640061-640092:1:exon

position:640061:1
position: 640061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640092:1
position: 640092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:644805-644903:1:exon

position:644805:1
position: 644805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989129
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989129
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily B member 1-like
translation: MGVFSFLFLQEQVRLLNQEAERSEDRSLSIEASFQSKIEQIQEELDNVQLVSAQKLLLEHKDVEIDYEEEDNQLHLNVNWPQCVEAQNEKPQTIVEEYEDQYQYAQTSASESAEELMKWRETVSKSTTSHDNDEWTVMDLRMNQVEEKREELPELEEEVGELQMDDLNSDNALLNAQLVQYRDQAKPDPVFVG
SIO_010081: LOC116989129
subclass of: SO_0000673
so part of: LOC116989129
location: join(632397..632543,633132..633249,633826..633878,635974..636106,640061..640092,644805..644903)
location: region:632397-644903:1
so has part: feature:632397-632543:1:exon
so has part: feature:633132-633249:1:exon
so has part: feature:633826-633878:1:exon
so has part: feature:635974-636106:1:exon
so has part: feature:640061-640092:1:exon
so has part: feature:644805-644903:1:exon

XP_032902246.1
type: Protein
SIO_000068: ncbiprotein

position:632397:1
position: 632397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632397-632543:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633132-633249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633826-633878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635974-636106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:640061-640092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644805-644903:1:exon

LOC116989131
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 713204..757165
location: region:713204-757165:1
so has part: feature:713204-757165:1:exon
subclass of: SO_0000010

116989131
type: Gene
SIO_000068: ncbigene

position:713204:1
position: 713204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757165:1
position: 757165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:713204-757165:1:exon

LOC116989131
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989131
product: solute carrier family 43 member 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033046356.1
SIO_010081: LOC116989131
subclass of: SO_0000673
so part of: LOC116989131
location: join(713204..713399,719306..719438,730077..730123,732415..732491,733822..733914,740002..740141,742282..742406,745405..745578,747656..747775,749838..750030,752562..752685,757067..757165)
location: region:713204-757165:1
so has part: feature:713204-713399:1:exon
so has part: feature:719306-719438:1:exon
so has part: feature:730077-730123:1:exon
so has part: feature:732415-732491:1:exon
so has part: feature:733822-733914:1:exon
so has part: feature:740002-740141:1:exon
so has part: feature:742282-742406:1:exon
so has part: feature:745405-745578:1:exon
so has part: feature:747656-747775:1:exon
so has part: feature:749838-750030:1:exon
so has part: feature:752562-752685:1:exon
so has part: feature:757067-757165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:713204-713399:1:exon

position:713399:1
position: 713399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:719306-719438:1:exon

position:719306:1
position: 719306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719438:1
position: 719438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:730077-730123:1:exon

position:730077:1
position: 730077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730123:1
position: 730123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:732415-732491:1:exon

position:732415:1
position: 732415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732491:1
position: 732491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:733822-733914:1:exon

position:733822:1
position: 733822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733914:1
position: 733914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:740002-740141:1:exon

position:740002:1
position: 740002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740141:1
position: 740141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:742282-742406:1:exon

position:742282:1
position: 742282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742406:1
position: 742406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:745405-745578:1:exon

position:745405:1
position: 745405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745578:1
position: 745578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:747656-747775:1:exon

position:747656:1
position: 747656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747775:1
position: 747775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:749838-750030:1:exon

position:749838:1
position: 749838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750030:1
position: 750030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:752562-752685:1:exon

position:752562:1
position: 752562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752685:1
position: 752685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:757067-757165:1:exon

position:757067:1
position: 757067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989131
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 43 member 3-like
translation: MTVGQLSEKVKLFLTFAAGVIECLGFAGAIQGWPSLVFVLKEEDYFTDLCIPLYNSSDPGPNNSTVGCDPQGERFTLIFTIAVLTMNIACIASGALLDNCGIMPTRFLGIFLYTTGNLLIAFATAASALMLFPAIALIGMGGMLVLTTNIKAGNLFGRNRSTVITLYNGAFSTGAAVFLLVKVAFEAGFPLKSSFLFISCLSVLQILFTVFLLPWKHIPYPLPEGFTYGVKFQKFRLMRRRKETAPQRTPSLGAVRIEGNGEESREEMGRGSLFTETEEEVPTFWSCVFSRLFFTNLLWFSLIQLRIVIFFGALNPLLNLMLKGDTEQVSTFTNAFAIIQLFSIFCAPVNGLIMDRRKLRCRRLDSVSGSDSCSRLAEMEAAVLPLALTVTLSVLFSLTAAIPVPKLQYFTFVLIMINGGFLYGGFSAFQAITFPPCHFGKLYGTSLALGAVISLLQYPCLILINGPLQHNPLYMNIAFIALVTLAYAHPINVYFYCQRANSQRAV
SIO_010081: LOC116989131
subclass of: SO_0000673
so part of: LOC116989131
location: join(713204..713399,719306..719438,730077..730123,732415..732491,733822..733914,740002..740141,742282..742406,745405..745578,747656..747775,749838..750030,752562..752685,757067..757165)
location: region:713204-757165:1
so has part: feature:713204-713399:1:exon
so has part: feature:719306-719438:1:exon
so has part: feature:730077-730123:1:exon
so has part: feature:732415-732491:1:exon
so has part: feature:733822-733914:1:exon
so has part: feature:740002-740141:1:exon
so has part: feature:742282-742406:1:exon
so has part: feature:745405-745578:1:exon
so has part: feature:747656-747775:1:exon
so has part: feature:749838-750030:1:exon
so has part: feature:752562-752685:1:exon
so has part: feature:757067-757165:1:exon

XP_032902247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:713204-713399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719306-719438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730077-730123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:732415-732491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:733822-733914:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740002-740141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:742282-742406:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:745405-745578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:747656-747775:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:749838-750030:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:752562-752685:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:757067-757165:1:exon

LOC116988706
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 903889..918528
location: region:903889-918528:1
so has part: feature:903889-918528:1:exon
subclass of: SO_0000011

116988706
type: Gene
SIO_000068: ncbigene

position:903889:1
position: 903889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918528:1
position: 918528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903889-918528:1:exon

LOC116988706
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988706
product: uncharacterized LOC116988706
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416044.1
SIO_010081: LOC116988706
subclass of: SO_0000673
so part of: LOC116988706
location: join(903889..903900,913060..913065,918423..918528)
location: region:903889-918528:1
so has part: feature:903889-903900:1:exon
so has part: feature:913060-913065:1:exon
so has part: feature:918423-918528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:903889-903900:1:exon

position:903900:1
position: 903900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:913060-913065:1:exon

position:913060:1
position: 913060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913065:1
position: 913065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:918423-918528:1:exon

position:918423:1
position: 918423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988707
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 950481..984914
location: region:950481-984914:1
so has part: feature:950481-984914:1:exon
subclass of: SO_0000010

116988707
type: Gene
SIO_000068: ncbigene

position:950481:1
position: 950481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984914:1
position: 984914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950481-984914:1:exon

LOC116988707
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988707
product: NACHT, LRR and PYD domains-containing protein 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033045547.1
SIO_010081: LOC116988707
subclass of: SO_0000673
so part of: LOC116988707
location: join(950481..950517,957853..958029,959289..959455,961107..961278,961382..961447,964368..966171,967159..967245,971775..971945,972100..972264,973861..974031,976154..976324,983521..983688,984040..984914)
location: region:950481-984914:1
so has part: feature:950481-950517:1:exon
so has part: feature:957853-958029:1:exon
so has part: feature:959289-959455:1:exon
so has part: feature:961107-961278:1:exon
so has part: feature:961382-961447:1:exon
so has part: feature:964368-966171:1:exon
so has part: feature:967159-967245:1:exon
so has part: feature:971775-971945:1:exon
so has part: feature:972100-972264:1:exon
so has part: feature:973861-974031:1:exon
so has part: feature:976154-976324:1:exon
so has part: feature:983521-983688:1:exon
so has part: feature:984040-984914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950481-950517:1:exon

position:950517:1
position: 950517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:957853-958029:1:exon

position:957853:1
position: 957853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958029:1
position: 958029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:959289-959455:1:exon

position:959289:1
position: 959289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959455:1
position: 959455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:961107-961278:1:exon

position:961107:1
position: 961107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961278:1
position: 961278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:961382-961447:1:exon

position:961382:1
position: 961382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961447:1
position: 961447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:964368-966171:1:exon

position:964368:1
position: 964368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966171:1
position: 966171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:967159-967245:1:exon

position:967159:1
position: 967159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967245:1
position: 967245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:971775-971945:1:exon

position:971775:1
position: 971775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971945:1
position: 971945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:972100-972264:1:exon

position:972100:1
position: 972100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972264:1
position: 972264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:973861-974031:1:exon

position:973861:1
position: 973861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974031:1
position: 974031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:976154-976324:1:exon

position:976154:1
position: 976154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976324:1
position: 976324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:983521-983688:1:exon

position:983521:1
position: 983521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983688:1
position: 983688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:984040-984914:1:exon

position:984040:1
position: 984040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988707
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: LOC116988707
product: NACHT, LRR and PYD domains-containing protein 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004416045.1
SIO_010081: LOC116988707
so part of: LOC116988707
location: join(950481..950517,957853..958029,959289..959455,961107..961278,961382..961447,964368..966171,967159..967245,971775..971945,972100..972264,973861..974031,976154..976324,983521..983688,984040..984215,984261..984914)
location: region:950481-984914:1
so has part: feature:950481-950517:1:exon
so has part: feature:957853-958029:1:exon
so has part: feature:959289-959455:1:exon
so has part: feature:961107-961278:1:exon
so has part: feature:961382-961447:1:exon
so has part: feature:964368-966171:1:exon
so has part: feature:967159-967245:1:exon
so has part: feature:971775-971945:1:exon
so has part: feature:972100-972264:1:exon
so has part: feature:973861-974031:1:exon
so has part: feature:976154-976324:1:exon
so has part: feature:983521-983688:1:exon
so has part: feature:984040-984215:1:exon
so has part: feature:984261-984914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950481-950517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:957853-958029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:959289-959455:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:961107-961278:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:961382-961447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:964368-966171:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967159-967245:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:971775-971945:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:972100-972264:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:973861-974031:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:976154-976324:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:983521-983688:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:984040-984215:1:exon

position:984215:1
position: 984215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:984261-984914:1:exon

position:984261:1
position: 984261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988707
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NACHT, LRR and PYD domains-containing protein 3-like
translation: MDTDLNSVNSAFLSHCDDHKLFQLTRFYRNRLEQAIEEGVDGLGFMLMGADHFSGPEYHSVIGLAEKGNRAAGSKLLLDLVMEKGSGAQRVMWESLVKTCHTLPKVNRILKDIQERGAGHFAYMDTERCLSQVPTHLKDLQKKHKETLRTQTETLSMNTILIKEKVKDFQLVDGYAALTVISTVRDRSLVEHELLARGRDHEKCRVKCLQRELEKIRIDQLFQSCFFHNVTYWEKIMRFFRYESRSLVSATRENFGSFTVVAGVPGIGKTTMVQKIVYDWATGKIYQHFHFVFSFRFRDLNTINCQITLKELILDQYPYFGNILGEIWKNPEGLLFIFDGLDEFKDMIDFDESQRHTEPQHKCPDPEFRCKVPDIVYSLIQQILLPGCSVLVTTRPNALHLLEKAKVSMCAEILGFVGEQRKEYFTRHFGDQTVAGAVFKHVEENAILYTMSYNPSYCSILVQTLGPFFTKGHMDPNRVPKTITQLYSYYIYNILQNHGRKTESPREVLLRLGKMAFTGVSEKKIVFTDGDLDKYNLQPSPFLSGFLIELLDRDDSVQNVVYTFPHLTIQEFVAALAQFLTPYSEDLRRLLTESHSTTDGRFEIFLRFVAGLSSSLSARGLAEFLGPFPHETTCQVIDWVKEEVKRQAGNTECEAGKRSLLNTMHYLFESHNSGLAQNALGSVKTLSFSGLRLTPIDCAVLSHVIGCCNTIKHLDLESCHIQCEGLQRLGPRLHKCQHLGLGNNDLGDSTMKLVSDALRNPNCKIQRLGLGNNGLTASPIAEFTTALSANRSLMELDIKDNKLGDLGVNLLSEPLKNVENKIQKLELKNNSFTASCMKKLVSALSGSLMELGLDNNKLGDSGVKLLCAALRNTDCKIQTLRLCSIGLTASGAEDLVSALSTNCSLINVSLSSNTLGTSGVKLVSEALKNPDCKIQKLHLWDVGLTESCSEDLASALFTNCSLKVLSLGDNQLGDLGVKRLSVALGNQHCKLQELELYKNGLTDSCTEDLSSCLRKMHSLKVVDLGANSFTDISVPSLRRLIEKRKNLKQIILQGNPISSDGQNQLKSLRGLRKGLNIEL
SIO_010081: LOC116988707
subclass of: SO_0000673
so part of: LOC116988707
location: join(958020..958029,959289..959455,961107..961278,961382..961447,964368..966171,967159..967245,971775..971945,972100..972264,973861..974031,976154..976324,983521..983688,984040..984127)
location: region:958020-984127:1
so has part: feature:958020-958029:1:exon
so has part: feature:959289-959455:1:exon
so has part: feature:961107-961278:1:exon
so has part: feature:961382-961447:1:exon
so has part: feature:964368-966171:1:exon
so has part: feature:967159-967245:1:exon
so has part: feature:971775-971945:1:exon
so has part: feature:972100-972264:1:exon
so has part: feature:973861-974031:1:exon
so has part: feature:976154-976324:1:exon
so has part: feature:983521-983688:1:exon
so has part: feature:984040-984127:1:exon

XP_032901438.1
type: Protein
SIO_000068: ncbiprotein

position:958020:1
position: 958020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984127:1
position: 984127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:958020-958029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959289-959455:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:961107-961278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:961382-961447:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:964368-966171:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967159-967245:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:971775-971945:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:972100-972264:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:973861-974031:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:976154-976324:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:983521-983688:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:984040-984127:1:exon

LOC116988708
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988708
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(977897..997046)
location: region:977897-997046:-1
so has part: feature:977897-997046:-1:exon
subclass of: SO_0000011

116988708
type: Gene
SIO_000068: ncbigene

position:977897:-1
position: 977897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997046:-1
position: 997046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977897-997046:-1:exon

LOC116988708
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988708
product: uncharacterized LOC116988708
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004416046.1
SIO_010081: LOC116988708
subclass of: SO_0000673
so part of: LOC116988708
location: complement(join(977897..978018,985051..985055,997036..997046))
location: region:977897-997046:-1
so has part: feature:997036-997046:-1:exon
so has part: feature:985051-985055:-1:exon
so has part: feature:977897-978018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:997036-997046:-1:exon

position:997036:-1
position: 997036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:985051-985055:-1:exon

position:985051:-1
position: 985051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985055:-1
position: 985055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:977897-978018:-1:exon

position:978018:-1
position: 978018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989132
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989132
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1010613..1025323)
location: region:1010613-1025323:-1
so has part: feature:1010613-1025323:-1:exon
subclass of: SO_0000010

116989132
type: Gene
SIO_000068: ncbigene

position:1010613:-1
position: 1010613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025323:-1
position: 1025323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010613-1025323:-1:exon

LOC116989132
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989132
product: solute carrier family 43 member 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033046357.1
SIO_010081: LOC116989132
subclass of: SO_0000673
so part of: LOC116989132
location: complement(join(1010613..1011134,1012034..1012157,1019128..1019320,1023194..1023313,1025125..1025323))
location: region:1010613-1025323:-1
so has part: feature:1025125-1025323:-1:exon
so has part: feature:1023194-1023313:-1:exon
so has part: feature:1019128-1019320:-1:exon
so has part: feature:1012034-1012157:-1:exon
so has part: feature:1010613-1011134:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1025125-1025323:-1:exon

position:1025125:-1
position: 1025125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1023194-1023313:-1:exon

position:1023194:-1
position: 1023194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023313:-1
position: 1023313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1019128-1019320:-1:exon

position:1019128:-1
position: 1019128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019320:-1
position: 1019320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1012034-1012157:-1:exon

position:1012034:-1
position: 1012034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012157:-1
position: 1012157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1010613-1011134:-1:exon

position:1011134:-1
position: 1011134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989132
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989132
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 43 member 3-like
translation: MCCSSPDTGSQVGENEEEIPTFRSCVFSRLFLSSLLWFSLLQLRFSFFIGTLNPLLNLMTNGDPELVSRFTNAFAFTQLFTVLCAPLNGLILDRRKWRRRGMNSPSGSATSQRVNDIQAVVLSLALTVTLSVLFSLAAAIPIPEVQYLTFVLFMINRSFLYGGLSAFLAMTFPPCHFGKLYGATRALAAIVSLLQYPFFTIVKGPLQDDPLYMNIGFIALVALAYAHPINVFIYCRWTNHQLSV
SIO_010081: LOC116989132
subclass of: SO_0000673
so part of: LOC116989132
location: complement(join(1011036..1011134,1012034..1012157,1019128..1019320,1023194..1023313,1025125..1025323))
location: region:1011036-1025323:-1
so has part: feature:1025125-1025323:-1:exon
so has part: feature:1023194-1023313:-1:exon
so has part: feature:1019128-1019320:-1:exon
so has part: feature:1012034-1012157:-1:exon
so has part: feature:1011036-1011134:-1:exon

XP_032902248.1
type: Protein
SIO_000068: ncbiprotein

position:1011036:-1
position: 1011036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025125-1025323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023194-1023313:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1019128-1019320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1012034-1012157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1011036-1011134:-1:exon

LOC116989201
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989201
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1040006..1060911)
location: region:1040006-1060911:-1
so has part: feature:1040006-1060911:-1:exon
subclass of: SO_0000011

116989201
type: Gene
SIO_000068: ncbigene

position:1040006:-1
position: 1040006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060911:-1
position: 1060911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1040006-1060911:-1:exon

LOC116989201
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989201
product: uncharacterized LOC116989201
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416169.1
SIO_010081: LOC116989201
subclass of: SO_0000673
so part of: LOC116989201
location: complement(join(1040006..1040015,1050074..1050080,1060803..1060911))
location: region:1040006-1060911:-1
so has part: feature:1060803-1060911:-1:exon
so has part: feature:1050074-1050080:-1:exon
so has part: feature:1040006-1040015:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1060803-1060911:-1:exon

position:1060803:-1
position: 1060803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1050074-1050080:-1:exon

position:1050074:-1
position: 1050074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050080:-1
position: 1050080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1040006-1040015:-1:exon

position:1040015:-1
position: 1040015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988709
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1070433..1123543
location: region:1070433-1123543:1
so has part: feature:1070433-1123543:1:exon
subclass of: SO_0000010

116988709
type: Gene
SIO_000068: ncbigene

position:1070433:1
position: 1070433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123543:1
position: 1123543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1070433-1123543:1:exon

LOC116988709
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988709
product: leupaxin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033045549.1
SIO_010081: LOC116988709
subclass of: SO_0000673
so part of: LOC116988709
location: join(1070433..1070548,1079874..1080061,1081984..1082066,1084597..1084696,1085962..1086144,1098215..1098388,1100753..1100834,1106020..1106168,1122799..1123543)
location: region:1070433-1123543:1
so has part: feature:1070433-1070548:1:exon
so has part: feature:1079874-1080061:1:exon
so has part: feature:1081984-1082066:1:exon
so has part: feature:1084597-1084696:1:exon
so has part: feature:1085962-1086144:1:exon
so has part: feature:1098215-1098388:1:exon
so has part: feature:1100753-1100834:1:exon
so has part: feature:1106020-1106168:1:exon
so has part: feature:1122799-1123543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1070433-1070548:1:exon

position:1070548:1
position: 1070548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1079874-1080061:1:exon

position:1079874:1
position: 1079874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080061:1
position: 1080061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1081984-1082066:1:exon

position:1081984:1
position: 1081984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082066:1
position: 1082066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1084597-1084696:1:exon

position:1084597:1
position: 1084597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084696:1
position: 1084696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1085962-1086144:1:exon

position:1085962:1
position: 1085962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086144:1
position: 1086144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1098215-1098388:1:exon

position:1098215:1
position: 1098215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1098388:1
position: 1098388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1100753-1100834:1:exon

position:1100753:1
position: 1100753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100834:1
position: 1100834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1106020-1106168:1:exon

position:1106020:1
position: 1106020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106168:1
position: 1106168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1122799-1123543:1:exon

position:1122799:1
position: 1122799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988709
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leupaxin-like
translation: MDELDMLLAELERPSVAAAGAGDDPSFLAGIDFLTTLATDGTSRVNSEQPKPTTSGGQQVESSVPTKLDPVYFTFLVDNEGAASKGGRPSDGVERPPVERSPDTQETILLSPTSAARELDEIMANLAGVLSLSEPSPTSAIHIPEANSQSPETSLDTMLGTLQTDLKRLGVSTGPKGICCSCKKPIVGKILTAMGLTWHPEHFVCAHCQEEIGHNGFYERDGRAYCNKDYQNLFSPQCAYCGAAIIDKILTALDKTWHPEHFFCAHCGDIFGTDGYLEKDGKAYCHKDYFCLFAPKCGCCDRPVLENYLSALDNVWHPECFVCRDCLTPFTNASFFEVSGMPYCEMHYHERQGSLCSACQKPVTGRCIAAMGKRFHPEHFVCAFCLKQLCKGVFKENNDKPYCNACFNKLFL
SIO_010081: LOC116988709
subclass of: SO_0000673
so part of: LOC116988709
location: join(1070536..1070548,1079874..1080061,1081984..1082066,1084597..1084696,1085962..1086144,1098215..1098388,1100753..1100834,1106020..1106168,1122799..1123065)
location: region:1070536-1123065:1
so has part: feature:1070536-1070548:1:exon
so has part: feature:1079874-1080061:1:exon
so has part: feature:1081984-1082066:1:exon
so has part: feature:1084597-1084696:1:exon
so has part: feature:1085962-1086144:1:exon
so has part: feature:1098215-1098388:1:exon
so has part: feature:1100753-1100834:1:exon
so has part: feature:1106020-1106168:1:exon
so has part: feature:1122799-1123065:1:exon

XP_032901440.1
type: Protein
SIO_000068: ncbiprotein

position:1070536:1
position: 1070536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123065:1
position: 1123065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1070536-1070548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1079874-1080061:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1081984-1082066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084597-1084696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085962-1086144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1098215-1098388:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1100753-1100834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1106020-1106168:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1122799-1123065:1:exon

LOC116989202
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989202
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1252601..1255093)
location: region:1252601-1255093:-1
so has part: feature:1252601-1255093:-1:exon
subclass of: SO_0000010

116989202
type: Gene
SIO_000068: ncbigene

position:1252601:-1
position: 1252601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255093:-1
position: 1255093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1252601-1255093:-1:exon

LOC116989202
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989202
product: immunoglobulin lambda-1 light chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033046434.1
SIO_010081: LOC116989202
subclass of: SO_0000673
so part of: LOC116989202
location: complement(join(1252601..1253225,1254207..1254566,1254962..1255093))
location: region:1252601-1255093:-1
so has part: feature:1254962-1255093:-1:exon
so has part: feature:1254207-1254566:-1:exon
so has part: feature:1252601-1253225:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1254962-1255093:-1:exon

position:1254962:-1
position: 1254962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1254207-1254566:-1:exon

position:1254207:-1
position: 1254207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254566:-1
position: 1254566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1252601-1253225:-1:exon

position:1253225:-1
position: 1253225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989202
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989202
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin lambda-1 light chain-like
translation: MAPALHLLWPLLLLPAGLLAIPVLNQTPTSGPVSAAQTARLECRMQNGNVANYYVYWYRQRPGERPEWLIRYDTDNEIFRGSGITDRFQPSRDTSANSCILTIGTVEPGDAAVYYCAVWESGVGYFFSPGTILEINSSESRKPSLLLLPPSPEETGTGSATLSCLVSGFKPGFVALRWAVDGVETESGVTSGAVSPDAEQTYRLSSYLRVPAAAWDKGTSYSCSVAHSSLGSPLRHTVSSSACAN
SIO_010081: LOC116989202
subclass of: SO_0000673
so part of: LOC116989202
location: complement(join(1252897..1253225,1254207..1254566,1254962..1255010))
location: region:1252897-1255010:-1
so has part: feature:1254962-1255010:-1:exon
so has part: feature:1254207-1254566:-1:exon
so has part: feature:1252897-1253225:-1:exon

XP_032902325.1
type: Protein
SIO_000068: ncbiprotein

position:1252897:-1
position: 1252897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255010:-1
position: 1255010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1254962-1255010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254207-1254566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1252897-1253225:-1:exon

LOC116988710
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1306474..1351592
location: region:1306474-1351592:1
so has part: feature:1306474-1351592:1:exon
subclass of: SO_0000010

116988710
type: Gene
SIO_000068: ncbigene

position:1306474:1
position: 1306474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1351592:1
position: 1351592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1306474-1351592:1:exon

LOC116988710
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988710
product: prolyl 3-hydroxylase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033045550.1
SIO_010081: LOC116988710
subclass of: SO_0000673
so part of: LOC116988710
location: join(1306474..1307046,1313526..1313678,1314715..1314904,1320551..1320682,1328481..1328620,1330534..1330626,1334580..1334632,1335031..1335143,1335668..1335792,1336873..1336959,1337948..1338098,1340182..1340278,1342327..1342402,1349055..1349195,1349754..1351592)
location: region:1306474-1351592:1
so has part: feature:1306474-1307046:1:exon
so has part: feature:1313526-1313678:1:exon
so has part: feature:1314715-1314904:1:exon
so has part: feature:1320551-1320682:1:exon
so has part: feature:1328481-1328620:1:exon
so has part: feature:1330534-1330626:1:exon
so has part: feature:1334580-1334632:1:exon
so has part: feature:1335031-1335143:1:exon
so has part: feature:1335668-1335792:1:exon
so has part: feature:1336873-1336959:1:exon
so has part: feature:1337948-1338098:1:exon
so has part: feature:1340182-1340278:1:exon
so has part: feature:1342327-1342402:1:exon
so has part: feature:1349055-1349195:1:exon
so has part: feature:1349754-1351592:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1306474-1307046:1:exon

position:1307046:1
position: 1307046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1313526-1313678:1:exon

position:1313526:1
position: 1313526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313678:1
position: 1313678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1314715-1314904:1:exon

position:1314715:1
position: 1314715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314904:1
position: 1314904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1320551-1320682:1:exon

position:1320551:1
position: 1320551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1320682:1
position: 1320682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1328481-1328620:1:exon

position:1328481:1
position: 1328481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328620:1
position: 1328620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1330534-1330626:1:exon

position:1330534:1
position: 1330534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1330626:1
position: 1330626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1334580-1334632:1:exon

position:1334580:1
position: 1334580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334632:1
position: 1334632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1335031-1335143:1:exon

position:1335031:1
position: 1335031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335143:1
position: 1335143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1335668-1335792:1:exon

position:1335668:1
position: 1335668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335792:1
position: 1335792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1336873-1336959:1:exon

position:1336873:1
position: 1336873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1336959:1
position: 1336959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1337948-1338098:1:exon

position:1337948:1
position: 1337948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1338098:1
position: 1338098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1340182-1340278:1:exon

position:1340182:1
position: 1340182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340278:1
position: 1340278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1342327-1342402:1:exon

position:1342327:1
position: 1342327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1342402:1
position: 1342402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1349055-1349195:1:exon

position:1349055:1
position: 1349055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349195:1
position: 1349195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1349754-1351592:1:exon

position:1349754:1
position: 1349754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prolyl 3-hydroxylase 1-like
translation: MGMRLLQRYTLLLAAALLLLCGGSGGELGAAPGQRDPLLRLPHDLLWAAGVSDYYLGRWGPAARELERSLLGRSTLRQLRGGCSEHCDPGSTPAQEPPSLGHPLLPTPGPLLSSDPLSQLAFFGRVLHRADCLRRCLEAGLGGEPSRHRVTGELDAAFRSRAPYNYLQLCYYQIGQLDKAAAAAQTFLAANPDHEEMQENVEKYRRMEGVKAEDFRDLEEQPHWVSYDLGSRLLQGEQFVESAQQLEQSVGQFLAALDQCRAQCGGPHQFSDYSYLEYQSHLFEAVADHLLQVLHCNQECVREVGTRLGPTQPLTDLLTSALRLLQYAHHRAGNYELAVEYSRTFLLFWPQDHAMLQNLDFFRSRLGEEGTARVGVREDIRLYLERSLLEKQLLYLAEEGQMDQGFEDPDSWTPAEIIPESVRKKQRTEEEKPQISAPRNQKSAPNNQMSQQAAEPRRGLDALKASWPGLEGLLIVEETGLRGPEEMVLDGALSHSECERMRDLANTAEELSQWSGDGRSAPPLPVGLDLLQVLKLSRAGKVRRDVAQLYRQVTERCRSIVEHLFLPPGPLHFSFSHLSCRSVPAGNEATPTSRSCLEEPEGSECSRQGSAGGARNFSVHLYLNDEFAGGNLLFMDLNTQNVTVEVTPRCGRLLTFRWGDGTSHGVGGVTRGQRCALVLWYTLDPRHNEKGRSQIDALTQELFPDPMPVDRSHEPDKGLPRPAEEEWPAGGRRQTQRERRRAEPVVAGRPGKDEL
SIO_010081: LOC116988710
subclass of: SO_0000673
so part of: LOC116988710
location: join(1306528..1307046,1313526..1313678,1314715..1314904,1320551..1320682,1328481..1328620,1330534..1330626,1334580..1334632,1335031..1335143,1335668..1335792,1336873..1336959,1337948..1338098,1340182..1340278,1342327..1342402,1349055..1349195,1349754..1349951)
location: region:1306528-1349951:1
so has part: feature:1306528-1307046:1:exon
so has part: feature:1313526-1313678:1:exon
so has part: feature:1314715-1314904:1:exon
so has part: feature:1320551-1320682:1:exon
so has part: feature:1328481-1328620:1:exon
so has part: feature:1330534-1330626:1:exon
so has part: feature:1334580-1334632:1:exon
so has part: feature:1335031-1335143:1:exon
so has part: feature:1335668-1335792:1:exon
so has part: feature:1336873-1336959:1:exon
so has part: feature:1337948-1338098:1:exon
so has part: feature:1340182-1340278:1:exon
so has part: feature:1342327-1342402:1:exon
so has part: feature:1349055-1349195:1:exon
so has part: feature:1349754-1349951:1:exon

XP_032901441.1
type: Protein
SIO_000068: ncbiprotein

position:1306528:1
position: 1306528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349951:1
position: 1349951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1306528-1307046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1313526-1313678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1314715-1314904:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1320551-1320682:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1328481-1328620:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1330534-1330626:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1334580-1334632:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1335031-1335143:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1335668-1335792:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1336873-1336959:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1337948-1338098:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1340182-1340278:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1342327-1342402:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1349055-1349195:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1349754-1349951:1:exon

LOC116988711
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1378003..1386686
location: region:1378003-1386686:1
so has part: feature:1378003-1386686:1:exon
subclass of: SO_0000010

116988711
type: Gene
SIO_000068: ncbigene

position:1378003:1
position: 1378003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386686:1
position: 1386686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378003-1386686:1:exon

LOC116988711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988711
product: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033045551.1
SIO_010081: LOC116988711
subclass of: SO_0000673
so part of: LOC116988711
location: join(1378003..1378087,1378595..1378633,1379830..1379936,1380143..1380206,1381252..1381414,1382016..1382082,1384735..1384936,1385879..1386095,1386540..1386686)
location: region:1378003-1386686:1
so has part: feature:1378003-1378087:1:exon
so has part: feature:1378595-1378633:1:exon
so has part: feature:1379830-1379936:1:exon
so has part: feature:1380143-1380206:1:exon
so has part: feature:1381252-1381414:1:exon
so has part: feature:1382016-1382082:1:exon
so has part: feature:1384735-1384936:1:exon
so has part: feature:1385879-1386095:1:exon
so has part: feature:1386540-1386686:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378003-1378087:1:exon

position:1378087:1
position: 1378087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1378595-1378633:1:exon

position:1378595:1
position: 1378595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378633:1
position: 1378633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1379830-1379936:1:exon

position:1379830:1
position: 1379830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1379936:1
position: 1379936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1380143-1380206:1:exon

position:1380143:1
position: 1380143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380206:1
position: 1380206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1381252-1381414:1:exon

position:1381252:1
position: 1381252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381414:1
position: 1381414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1382016-1382082:1:exon

position:1382016:1
position: 1382016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382082:1
position: 1382082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1384735-1384936:1:exon

position:1384735:1
position: 1384735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384936:1
position: 1384936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1385879-1386095:1:exon

position:1385879:1
position: 1385879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386095:1
position: 1386095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1386540-1386686:1:exon

position:1386540:1
position: 1386540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3-like
translation: MAEMEQLKQEMESLKQEIAEARKAVCDSSLSQVSAGVDAVSRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIVWDSYSTNKMHAIPLRSSWVMTCCYAPSGNCVACGGLDNMCSIYNLKSREGNVKVNRELAGHNGYLSCCRFLNDNEIITSSGDTTCILWDIETGKEKTAFLGHSGDVMSLAVSPDFSLFVSGACDASAKLWDIRDGRCRQTFLGHESDINAICFFPSGQAVCTGSDDASCRIFDLRADQEVAVYASEGVLCGITSVAFSRSGRLLLAGYDDFNCNVWDTLKAERCGVLSGHDNRVSCLGVPENGMAVATGSWDSFLKIWN
SIO_010081: LOC116988711
subclass of: SO_0000673
so part of: LOC116988711
location: join(1378031..1378087,1378595..1378633,1379830..1379936,1380143..1380206,1381252..1381414,1382016..1382082,1384735..1384936,1385879..1386095,1386540..1386646)
location: region:1378031-1386646:1
so has part: feature:1378031-1378087:1:exon
so has part: feature:1378595-1378633:1:exon
so has part: feature:1379830-1379936:1:exon
so has part: feature:1380143-1380206:1:exon
so has part: feature:1381252-1381414:1:exon
so has part: feature:1382016-1382082:1:exon
so has part: feature:1384735-1384936:1:exon
so has part: feature:1385879-1386095:1:exon
so has part: feature:1386540-1386646:1:exon

XP_032901442.1
type: Protein
SIO_000068: ncbiprotein

position:1378031:1
position: 1378031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386646:1
position: 1386646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378031-1378087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1378595-1378633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1379830-1379936:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1380143-1380206:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1381252-1381414:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1382016-1382082:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1384735-1384936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1385879-1386095:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1386540-1386646:1:exon

LOC116988712
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988712
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1380170..1403550)
location: region:1380170-1403550:-1
so has part: feature:1380170-1403550:-1:exon
subclass of: SO_0000011

116988712
type: Gene
SIO_000068: ncbigene

position:1380170:-1
position: 1380170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1403550:-1
position: 1403550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1380170-1403550:-1:exon

LOC116988712
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988712
product: uncharacterized LOC116988712
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004416047.1
SIO_010081: LOC116988712
subclass of: SO_0000673
so part of: LOC116988712
location: complement(join(1380170..1380181,1398363..1398367,1403470..1403550))
location: region:1380170-1403550:-1
so has part: feature:1403470-1403550:-1:exon
so has part: feature:1398363-1398367:-1:exon
so has part: feature:1380170-1380181:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1403470-1403550:-1:exon

position:1403470:-1
position: 1403470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1398363-1398367:-1:exon

position:1398363:-1
position: 1398363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398367:-1
position: 1398367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1380170-1380181:-1:exon

position:1380181:-1
position: 1380181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989231
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989231
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 1418828..1418923
location: region:1418828-1418923:1
so has part: feature:1418828-1418923:1:exon

116989231
type: Gene
SIO_000068: ncbigene

position:1418828:1
position: 1418828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1418923:1
position: 1418923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1418828-1418923:1:exon

LOC116989231
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116989231
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00619
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116989231
subclass of: SO_0000673
so part of: LOC116989231
location: 1418828..1418923
location: region:1418828-1418923:1
so has part: feature:1418828-1418923:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1418828-1418923:1:exon

ncf1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ncf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1549389..1692463)
location: region:1549389-1692463:-1
so has part: feature:1549389-1692463:-1:exon
subclass of: SO_0000010

116988713
type: Gene
SIO_000068: ncbigene

position:1549389:-1
position: 1549389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1692463:-1
position: 1692463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1549389-1692463:-1:exon

ncf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ncf1
product: neutrophil cytosolic factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033045553.1
SIO_010081: ncf1
subclass of: SO_0000673
so part of: ncf1
location: complement(join(1549389..1549580,1550866..1550977,1571787..1571959,1574060..1574167,1577259..1577376,1579381..1579488,1586224..1586346,1630397..1630455,1642591..1642756,1649702..1649777,1672175..1672255,1692179..1692463))
location: region:1549389-1692463:-1
so has part: feature:1692179-1692463:-1:exon
so has part: feature:1672175-1672255:-1:exon
so has part: feature:1649702-1649777:-1:exon
so has part: feature:1642591-1642756:-1:exon
so has part: feature:1630397-1630455:-1:exon
so has part: feature:1586224-1586346:-1:exon
so has part: feature:1579381-1579488:-1:exon
so has part: feature:1577259-1577376:-1:exon
so has part: feature:1574060-1574167:-1:exon
so has part: feature:1571787-1571959:-1:exon
so has part: feature:1550866-1550977:-1:exon
so has part: feature:1549389-1549580:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1692179-1692463:-1:exon

position:1692179:-1
position: 1692179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1672175-1672255:-1:exon

position:1672175:-1
position: 1672175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1672255:-1
position: 1672255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1649702-1649777:-1:exon

position:1649702:-1
position: 1649702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1649777:-1
position: 1649777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1642591-1642756:-1:exon

position:1642591:-1
position: 1642591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1642756:-1
position: 1642756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1630397-1630455:-1:exon

position:1630397:-1
position: 1630397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1630455:-1
position: 1630455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1586224-1586346:-1:exon

position:1586224:-1
position: 1586224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1586346:-1
position: 1586346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1579381-1579488:-1:exon

position:1579381:-1
position: 1579381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1579488:-1
position: 1579488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1577259-1577376:-1:exon

position:1577259:-1
position: 1577259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577376:-1
position: 1577376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1574060-1574167:-1:exon

position:1574060:-1
position: 1574060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574167:-1
position: 1574167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1571787-1571959:-1:exon

position:1571787:-1
position: 1571787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571959:-1
position: 1571959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1550866-1550977:-1:exon

position:1550866:-1
position: 1550866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1550977:-1
position: 1550977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1549389-1549580:-1:exon

position:1549580:-1
position: 1549580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ncf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ncf1
product: neutrophil cytosolic factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033045554.1
SIO_010081: ncf1
subclass of: SO_0000673
so part of: ncf1
location: complement(join(1549389..1549580,1550860..1550977,1571787..1571959,1574060..1574167,1577259..1577376,1579381..1579488,1586224..1586346,1630397..1630455,1642591..1642756,1649702..1649777,1672175..1672255,1692179..1692463))
location: region:1549389-1692463:-1
so has part: feature:1692179-1692463:-1:exon
so has part: feature:1672175-1672255:-1:exon
so has part: feature:1649702-1649777:-1:exon
so has part: feature:1642591-1642756:-1:exon
so has part: feature:1630397-1630455:-1:exon
so has part: feature:1586224-1586346:-1:exon
so has part: feature:1579381-1579488:-1:exon
so has part: feature:1577259-1577376:-1:exon
so has part: feature:1574060-1574167:-1:exon
so has part: feature:1571787-1571959:-1:exon
so has part: feature:1550860-1550977:-1:exon
so has part: feature:1549389-1549580:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1692179-1692463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1672175-1672255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1649702-1649777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1642591-1642756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1630397-1630455:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1586224-1586346:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1579381-1579488:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1577259-1577376:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1574060-1574167:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1571787-1571959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1550860-1550977:-1:exon

position:1550860:-1
position: 1550860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1549389-1549580:-1:exon

ncf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ncf1
product: neutrophil cytosolic factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033045555.1
SIO_010081: ncf1
subclass of: SO_0000673
so part of: ncf1
location: complement(join(1549389..1549580,1550830..1550977,1571787..1571959,1574060..1574167,1577259..1577376,1579381..1579488,1586224..1586346,1630397..1630455,1642591..1642756,1649702..1649777,1672175..1672255,1692179..1692463))
location: region:1549389-1692463:-1
so has part: feature:1692179-1692463:-1:exon
so has part: feature:1672175-1672255:-1:exon
so has part: feature:1649702-1649777:-1:exon
so has part: feature:1642591-1642756:-1:exon
so has part: feature:1630397-1630455:-1:exon
so has part: feature:1586224-1586346:-1:exon
so has part: feature:1579381-1579488:-1:exon
so has part: feature:1577259-1577376:-1:exon
so has part: feature:1574060-1574167:-1:exon
so has part: feature:1571787-1571959:-1:exon
so has part: feature:1550830-1550977:-1:exon
so has part: feature:1549389-1549580:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1692179-1692463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1672175-1672255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1649702-1649777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1642591-1642756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1630397-1630455:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1586224-1586346:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1579381-1579488:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1577259-1577376:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1574060-1574167:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1571787-1571959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1550830-1550977:-1:exon

position:1550830:-1
position: 1550830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1549389-1549580:-1:exon

ncf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ncf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutrophil cytosol factor 1 isoform X1
translation: MDEPYIRHLEVLGFEKRFVPNQYYVYMLMVKWSDLSEKLIYRKFSEIYDFHKMLKELFPIEAGEIDSKARTLPHLPAPRWLEGHKATENRQSTLSDYFQSLLNLPPKISRCQWIVNFLQVRPDDVALPFPHATKKTETYLLPKDRARSSSSEITGPMLLQTYRSIAVYQKNSKYEMSIQTGDIVEIVEKNQNGWWFCQLEGRRGWLPAAFLEPLDSPDENEEQEPNYEGEVYKVIHSYKAEQQDELSLSEDELVDVIHKLLDGWWVVRKGEITGYYPSMHLQKSGTALNTGFNMKKGHLPPPRRSTIRNAQSIHVLERKQISQDSYRRNSKRYLQQKGAQGHTIANRNAWKEKQDPRTTATGGTVQEEERRKKIPEIPPRPTLSEILAHCTEQTKSKINLKTDPVW
SIO_010081: ncf1
subclass of: SO_0000673
so part of: ncf1
location: complement(join(1549556..1549580,1550866..1550977,1571787..1571959,1574060..1574167,1577259..1577376,1579381..1579488,1586224..1586346,1630397..1630455,1642591..1642756,1649702..1649777,1672175..1672255,1692179..1692250))
location: region:1549556-1692250:-1
so has part: feature:1692179-1692250:-1:exon
so has part: feature:1672175-1672255:-1:exon
so has part: feature:1649702-1649777:-1:exon
so has part: feature:1642591-1642756:-1:exon
so has part: feature:1630397-1630455:-1:exon
so has part: feature:1586224-1586346:-1:exon
so has part: feature:1579381-1579488:-1:exon
so has part: feature:1577259-1577376:-1:exon
so has part: feature:1574060-1574167:-1:exon
so has part: feature:1571787-1571959:-1:exon
so has part: feature:1550866-1550977:-1:exon
so has part: feature:1549556-1549580:-1:exon

XP_032901444.1
type: Protein
SIO_000068: ncbiprotein

position:1549556:-1
position: 1549556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1692250:-1
position: 1692250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1692179-1692250:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1672175-1672255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1649702-1649777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1642591-1642756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1630397-1630455:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1586224-1586346:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1579381-1579488:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1577259-1577376:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1574060-1574167:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1571787-1571959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1550866-1550977:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1549556-1549580:-1:exon

ncf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ncf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutrophil cytosol factor 1 isoform X2
translation: MDEPYIRHLEVLGFEKRFVPNQYYVYMLMVKWSDLSEKLIYRKFSEIYDFHKMLKELFPIEAGEIDSKARTLPHLPAPRWLEGHKATENRQSTLSDYFQSLLNLPPKISRCQWIVNFLQVRPDDVALPFPHATKKTETYLLPKDRARSSSSEITGPMLLQTYRSIAVYQKNSKYEMSIQTGDIVEIVEKNQNGWWFCQLEGRRGWLPAAFLEPLDSPDENEEQEPNYEGEVYKVIHSYKAEQQDELSLSEDELVDVIHKLLDGWWVVRKGEITGYYPSMHLQKSGTALNTGFNMKKGHLPPPRRSTIRNAQSIHVLERKQISQDSYRRNSKRYLQQKGAQGHTIANRNAWKEKQDPRTTATGGTVQEEERRKKIPEIPPRPTLSEILAHCTEQTKSKIK
SIO_010081: ncf1
subclass of: SO_0000673
so part of: ncf1
location: complement(join(1550862..1550977,1571787..1571959,1574060..1574167,1577259..1577376,1579381..1579488,1586224..1586346,1630397..1630455,1642591..1642756,1649702..1649777,1672175..1672255,1692179..1692250))
location: region:1550862-1692250:-1
so has part: feature:1692179-1692250:-1:exon
so has part: feature:1672175-1672255:-1:exon
so has part: feature:1649702-1649777:-1:exon
so has part: feature:1642591-1642756:-1:exon
so has part: feature:1630397-1630455:-1:exon
so has part: feature:1586224-1586346:-1:exon
so has part: feature:1579381-1579488:-1:exon
so has part: feature:1577259-1577376:-1:exon
so has part: feature:1574060-1574167:-1:exon
so has part: feature:1571787-1571959:-1:exon
so has part: feature:1550862-1550977:-1:exon

XP_032901445.1
type: Protein
SIO_000068: ncbiprotein

position:1550862:-1
position: 1550862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1692179-1692250:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1672175-1672255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1649702-1649777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1642591-1642756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1630397-1630455:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1586224-1586346:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1579381-1579488:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1577259-1577376:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1574060-1574167:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1571787-1571959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1550862-1550977:-1:exon

ncf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ncf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutrophil cytosol factor 1 isoform X2
translation: MDEPYIRHLEVLGFEKRFVPNQYYVYMLMVKWSDLSEKLIYRKFSEIYDFHKMLKELFPIEAGEIDSKARTLPHLPAPRWLEGHKATENRQSTLSDYFQSLLNLPPKISRCQWIVNFLQVRPDDVALPFPHATKKTETYLLPKDRARSSSSEITGPMLLQTYRSIAVYQKNSKYEMSIQTGDIVEIVEKNQNGWWFCQLEGRRGWLPAAFLEPLDSPDENEEQEPNYEGEVYKVIHSYKAEQQDELSLSEDELVDVIHKLLDGWWVVRKGEITGYYPSMHLQKSGTALNTGFNMKKGHLPPPRRSTIRNAQSIHVLERKQISQDSYRRNSKRYLQQKGAQGHTIANRNAWKEKQDPRTTATGGTVQEEERRKKIPEIPPRPTLSEILAHCTEQTKSKIK
SIO_010081: ncf1
subclass of: SO_0000673
so part of: ncf1
location: complement(join(1550862..1550977,1571787..1571959,1574060..1574167,1577259..1577376,1579381..1579488,1586224..1586346,1630397..1630455,1642591..1642756,1649702..1649777,1672175..1672255,1692179..1692250))
location: region:1550862-1692250:-1
so has part: feature:1692179-1692250:-1:exon
so has part: feature:1672175-1672255:-1:exon
so has part: feature:1649702-1649777:-1:exon
so has part: feature:1642591-1642756:-1:exon
so has part: feature:1630397-1630455:-1:exon
so has part: feature:1586224-1586346:-1:exon
so has part: feature:1579381-1579488:-1:exon
so has part: feature:1577259-1577376:-1:exon
so has part: feature:1574060-1574167:-1:exon
so has part: feature:1571787-1571959:-1:exon
so has part: feature:1550862-1550977:-1:exon

XP_032901446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1692179-1692250:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1672175-1672255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1649702-1649777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1642591-1642756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1630397-1630455:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1586224-1586346:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1579381-1579488:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1577259-1577376:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1574060-1574167:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1571787-1571959:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1550862-1550977:-1:exon

LOC116988715
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1587195..1587616)
location: region:1587195-1587616:-1
so has part: feature:1587195-1587616:-1:exon
subclass of: SO_0000011

116988715
type: Gene
SIO_000068: ncbigene

position:1587195:-1
position: 1587195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1587616:-1
position: 1587616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1587195-1587616:-1:exon

LOC116988715
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988715
product: uncharacterized LOC116988715
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004416048.1
SIO_010081: LOC116988715
subclass of: SO_0000673
so part of: LOC116988715
location: complement(join(1587195..1587235,1587576..1587616))
location: region:1587195-1587616:-1
so has part: feature:1587576-1587616:-1:exon
so has part: feature:1587195-1587235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1587576-1587616:-1:exon

position:1587576:-1
position: 1587576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1587195-1587235:-1:exon

position:1587235:-1
position: 1587235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988716
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1711427..1794227)
location: region:1711427-1794227:-1
so has part: feature:1711427-1794227:-1:exon
subclass of: SO_0000010

116988716
type: Gene
SIO_000068: ncbigene

position:1711427:-1
position: 1711427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1794227:-1
position: 1794227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1711427-1794227:-1:exon

LOC116988716
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988716
product: protein phosphatase PTC7 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033045556.1
SIO_010081: LOC116988716
subclass of: SO_0000673
so part of: LOC116988716
location: complement(join(1711427..1718080,1722339..1722468,1738043..1738166,1754392..1754590,1759671..1759850,1793977..1794227))
location: region:1711427-1794227:-1
so has part: feature:1793977-1794227:-1:exon
so has part: feature:1759671-1759850:-1:exon
so has part: feature:1754392-1754590:-1:exon
so has part: feature:1738043-1738166:-1:exon
so has part: feature:1722339-1722468:-1:exon
so has part: feature:1711427-1718080:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1793977-1794227:-1:exon

position:1793977:-1
position: 1793977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1759671-1759850:-1:exon

position:1759671:-1
position: 1759671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1759850:-1
position: 1759850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1754392-1754590:-1:exon

position:1754392:-1
position: 1754392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1754590:-1
position: 1754590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1738043-1738166:-1:exon

position:1738043:-1
position: 1738043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1738166:-1
position: 1738166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1722339-1722468:-1:exon

position:1722339:-1
position: 1722339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1722468:-1
position: 1722468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1711427-1718080:-1:exon

position:1718080:-1
position: 1718080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988716
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase PTC7 homolog
translation: MQSVLAYGRLLARALLGSGLRRSDRREYRLITAGCGFGKDRGKGTGYGDDACFVAAHRLADVIGVADGVGGWWDYGVDPSQFSTTLMKTCERLVHEGLFVPSNPVGILVASYKEMLQNKVPLLGSSTACLVILDREEHCLYTANLGDSGFLIVRDGRIIHRSDEQQHYFNTPFQLAIAPPEAQGSVLNDSPETAEGFTFNMEVGDIILTATDGLFDNMTDYMILQQLRLMKDCNYDSLKQTVKNIAEQAQQLAYDPNYMSPFAQRACANGLNVQGGKPDDITVLLSVVTENKE
SIO_010081: LOC116988716
subclass of: SO_0000673
so part of: LOC116988716
location: complement(join(1718022..1718080,1722339..1722468,1738043..1738166,1754392..1754590,1759671..1759850,1793977..1794166))
location: region:1718022-1794166:-1
so has part: feature:1793977-1794166:-1:exon
so has part: feature:1759671-1759850:-1:exon
so has part: feature:1754392-1754590:-1:exon
so has part: feature:1738043-1738166:-1:exon
so has part: feature:1722339-1722468:-1:exon
so has part: feature:1718022-1718080:-1:exon

XP_032901447.1
type: Protein
SIO_000068: ncbiprotein

position:1718022:-1
position: 1718022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1794166:-1
position: 1794166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1793977-1794166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1759671-1759850:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1754392-1754590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1738043-1738166:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1722339-1722468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1718022-1718080:-1:exon

prkrip1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: prkrip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1799360..1808333)
location: region:1799360-1808333:-1
so has part: feature:1799360-1808333:-1:exon
subclass of: SO_0000010

116988717
type: Gene
SIO_000068: ncbigene

position:1799360:-1
position: 1799360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808333:-1
position: 1808333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1799360-1808333:-1:exon

prkrip1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: prkrip1
product: PRKR interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033045557.1
SIO_010081: prkrip1
subclass of: SO_0000673
so part of: prkrip1
location: complement(join(1799360..1799710,1800622..1800689,1800938..1801023,1805889..1805989,1807784..1807862,1808191..1808333))
location: region:1799360-1808333:-1
so has part: feature:1808191-1808333:-1:exon
so has part: feature:1807784-1807862:-1:exon
so has part: feature:1805889-1805989:-1:exon
so has part: feature:1800938-1801023:-1:exon
so has part: feature:1800622-1800689:-1:exon
so has part: feature:1799360-1799710:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1808191-1808333:-1:exon

position:1808191:-1
position: 1808191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1807784-1807862:-1:exon

position:1807784:-1
position: 1807784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1807862:-1
position: 1807862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1805889-1805989:-1:exon

position:1805889:-1
position: 1805889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1805989:-1
position: 1805989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1800938-1801023:-1:exon

position:1800938:-1
position: 1800938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1801023:-1
position: 1801023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1800622-1800689:-1:exon

position:1800622:-1
position: 1800622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1800689:-1
position: 1800689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1799360-1799710:-1:exon

position:1799710:-1
position: 1799710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

prkrip1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: prkrip1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRKR-interacting protein 1
translation: MAERGARAGRGAQPLVIPRNAAEEQRLKLERLMRHPEKQVSIAEKPKEWAPRPPPEFVRDVMGSSAGAGSGEFHVYRHLRRREYMREEFMEKQAIQHRLDKEFQRKVDQNKRAAEERTDKRRKKRQKLKEKKILAKKVKEEEKKDIDGSETSSSGEEEVEVEVPEEKPDDSEAPSFIMGGR
SIO_010081: prkrip1
subclass of: SO_0000673
so part of: prkrip1
location: complement(join(1799607..1799710,1800622..1800689,1800938..1801023,1805889..1805989,1807784..1807862,1808191..1808298))
location: region:1799607-1808298:-1
so has part: feature:1808191-1808298:-1:exon
so has part: feature:1807784-1807862:-1:exon
so has part: feature:1805889-1805989:-1:exon
so has part: feature:1800938-1801023:-1:exon
so has part: feature:1800622-1800689:-1:exon
so has part: feature:1799607-1799710:-1:exon

XP_032901448.1
type: Protein
SIO_000068: ncbiprotein

position:1799607:-1
position: 1799607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808298:-1
position: 1808298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1808191-1808298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1807784-1807862:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1805889-1805989:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1800938-1801023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1800622-1800689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1799607-1799710:-1:exon

sh2b2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: sh2b2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1831608..1919103)
location: region:1831608-1919103:-1
so has part: feature:1831608-1919103:-1:exon
subclass of: SO_0000010

116988718
type: Gene
SIO_000068: ncbigene

position:1831608:-1
position: 1831608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1919103:-1
position: 1919103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1831608-1919103:-1:exon

sh2b2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: sh2b2
product: SH2B adaptor protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033045562.1
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(1831608..1832267,1844248..1844419,1856559..1856752,1858797..1858964,1859728..1859834,1864539..1864630,1881712..1881813,1908054..1908917,1912562..1912702,1919001..1919103))
location: region:1831608-1919103:-1
so has part: feature:1919001-1919103:-1:exon
so has part: feature:1912562-1912702:-1:exon
so has part: feature:1908054-1908917:-1:exon
so has part: feature:1881712-1881813:-1:exon
so has part: feature:1864539-1864630:-1:exon
so has part: feature:1859728-1859834:-1:exon
so has part: feature:1858797-1858964:-1:exon
so has part: feature:1856559-1856752:-1:exon
so has part: feature:1844248-1844419:-1:exon
so has part: feature:1831608-1832267:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1919001-1919103:-1:exon

position:1919001:-1
position: 1919001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1912562-1912702:-1:exon

position:1912562:-1
position: 1912562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1912702:-1
position: 1912702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1908054-1908917:-1:exon

position:1908054:-1
position: 1908054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1908917:-1
position: 1908917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1881712-1881813:-1:exon

position:1881712:-1
position: 1881712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1881813:-1
position: 1881813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1864539-1864630:-1:exon

position:1864539:-1
position: 1864539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1864630:-1
position: 1864630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1859728-1859834:-1:exon

position:1859728:-1
position: 1859728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1859834:-1
position: 1859834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1858797-1858964:-1:exon

position:1858797:-1
position: 1858797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858964:-1
position: 1858964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1856559-1856752:-1:exon

position:1856559:-1
position: 1856559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856752:-1
position: 1856752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1844248-1844419:-1:exon

position:1844248:-1
position: 1844248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1844419:-1
position: 1844419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1831608-1832267:-1:exon

position:1832267:-1
position: 1832267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sh2b2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: sh2b2
product: SH2B adaptor protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033045560.1
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(1831608..1832267,1844248..1844419,1856559..1856752,1858797..1858964,1859728..1859834,1864539..1864630,1881712..1881813,1908054..1908917,1912562..1912702,1918089..1918232))
location: region:1831608-1918232:-1
so has part: feature:1918089-1918232:-1:exon
so has part: feature:1912562-1912702:-1:exon
so has part: feature:1908054-1908917:-1:exon
so has part: feature:1881712-1881813:-1:exon
so has part: feature:1864539-1864630:-1:exon
so has part: feature:1859728-1859834:-1:exon
so has part: feature:1858797-1858964:-1:exon
so has part: feature:1856559-1856752:-1:exon
so has part: feature:1844248-1844419:-1:exon
so has part: feature:1831608-1832267:-1:exon

position:1918232:-1
position: 1918232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1918089-1918232:-1:exon

position:1918089:-1
position: 1918089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1912562-1912702:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1908054-1908917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1881712-1881813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1864539-1864630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1859728-1859834:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1858797-1858964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1856559-1856752:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1844248-1844419:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1831608-1832267:-1:exon

sh2b2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: sh2b2
product: SH2B adaptor protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033045564.1
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(1831608..1832267,1844248..1844419,1856559..1856752,1858797..1858964,1859728..1859834,1864539..1864630,1881712..1881813,1908054..1908917,1912566..1912702,1918057..1918161))
location: region:1831608-1918161:-1
so has part: feature:1918057-1918161:-1:exon
so has part: feature:1912566-1912702:-1:exon
so has part: feature:1908054-1908917:-1:exon
so has part: feature:1881712-1881813:-1:exon
so has part: feature:1864539-1864630:-1:exon
so has part: feature:1859728-1859834:-1:exon
so has part: feature:1858797-1858964:-1:exon
so has part: feature:1856559-1856752:-1:exon
so has part: feature:1844248-1844419:-1:exon
so has part: feature:1831608-1832267:-1:exon

position:1918161:-1
position: 1918161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1918057-1918161:-1:exon

position:1918057:-1
position: 1918057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1912566-1912702:-1:exon

position:1912566:-1
position: 1912566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1908054-1908917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1881712-1881813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1864539-1864630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1859728-1859834:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1858797-1858964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1856559-1856752:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1844248-1844419:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1831608-1832267:-1:exon

sh2b2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: sh2b2
product: SH2B adaptor protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033045559.1
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(1831608..1832267,1844248..1844419,1856559..1856752,1858797..1858964,1859728..1859834,1864539..1864630,1881712..1881813,1908054..1908917,1912562..1912702,1918057..1918161))
location: region:1831608-1918161:-1
so has part: feature:1918057-1918161:-1:exon
so has part: feature:1912562-1912702:-1:exon
so has part: feature:1908054-1908917:-1:exon
so has part: feature:1881712-1881813:-1:exon
so has part: feature:1864539-1864630:-1:exon
so has part: feature:1859728-1859834:-1:exon
so has part: feature:1858797-1858964:-1:exon
so has part: feature:1856559-1856752:-1:exon
so has part: feature:1844248-1844419:-1:exon
so has part: feature:1831608-1832267:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1918057-1918161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1912562-1912702:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1908054-1908917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1881712-1881813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1864539-1864630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1859728-1859834:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1858797-1858964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1856559-1856752:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1844248-1844419:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1831608-1832267:-1:exon

sh2b2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: sh2b2
product: SH2B adaptor protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033045563.1
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(1831608..1832267,1844248..1844419,1856559..1856752,1858797..1858964,1859728..1859834,1864539..1864630,1881712..1881813,1908054..1908917,1912562..1912702,1916242..1916247,1918089..1918157))
location: region:1831608-1918157:-1
so has part: feature:1918089-1918157:-1:exon
so has part: feature:1916242-1916247:-1:exon
so has part: feature:1912562-1912702:-1:exon
so has part: feature:1908054-1908917:-1:exon
so has part: feature:1881712-1881813:-1:exon
so has part: feature:1864539-1864630:-1:exon
so has part: feature:1859728-1859834:-1:exon
so has part: feature:1858797-1858964:-1:exon
so has part: feature:1856559-1856752:-1:exon
so has part: feature:1844248-1844419:-1:exon
so has part: feature:1831608-1832267:-1:exon

position:1918157:-1
position: 1918157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1918089-1918157:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1916242-1916247:-1:exon

position:1916242:-1
position: 1916242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1916247:-1
position: 1916247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1912562-1912702:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1908054-1908917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1881712-1881813:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1864539-1864630:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1859728-1859834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1858797-1858964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1856559-1856752:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1844248-1844419:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1831608-1832267:-1:exon

sh2b2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: sh2b2
product: SH2B adaptor protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033045561.1
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(1831608..1832267,1844248..1844419,1856559..1856752,1858797..1858964,1859728..1859834,1864539..1864630,1881712..1881813,1908054..1908917,1912562..1912923))
location: region:1831608-1912923:-1
so has part: feature:1912562-1912923:-1:exon
so has part: feature:1908054-1908917:-1:exon
so has part: feature:1881712-1881813:-1:exon
so has part: feature:1864539-1864630:-1:exon
so has part: feature:1859728-1859834:-1:exon
so has part: feature:1858797-1858964:-1:exon
so has part: feature:1856559-1856752:-1:exon
so has part: feature:1844248-1844419:-1:exon
so has part: feature:1831608-1832267:-1:exon

position:1912923:-1
position: 1912923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1912562-1912923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1908054-1908917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1881712-1881813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1864539-1864630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1859728-1859834:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1858797-1858964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1856559-1856752:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1844248-1844419:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1831608-1832267:-1:exon

sh2b2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: sh2b2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 2
translation: MNGDSGSQDSLQDISDWREFCEVQARAAASDFAQKFRIFISENPHYDSSGIETNFLQHFASHFVVYFAREVSGPYLSDSPSKCSVAPASDIRSCQQPARAAVLQRKAHSDSLPRGDNASNARSYLRHQQVCNMSNLGHSRSSEDVSLSTSARPKFKKGFSLRNMSMCVVDGMKEMLQWRSSAEPLLGARPEGEEDSAGSRLDSEAHDRLSQKLERLRLTKLSSSKVELQDIQREGMLRYMLADDNSLSSSHWHKCRVLLRKAVGIEEERFILEFYAPPKSTKSRVSIPLSAIVEVRTTMPLEMPDRDNTFVLKVENGVEYILETIDSLQKHSWVADIQDCMDPGDSEEDLELTSLQPAVTVAGRESPSIPPCTCAFTLDPPAQAPDTTCTDPDSAPIGSPVRPKDVSVQQPLAHVPLENFLQTLHSETPSTAVSTDATEQPALESQLCSYPWFHGTLPRVKAAQLVLAGGKRSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSVNETGQCHVQHLWFQSILDMLKHFHTHPIPLESGGSADITLRTYVLATQSFSEMSAPSPSAPTQPNSRSDVFQTQHYFTSALAGNLQAVAQAEDPSMAHRLEAAVTAHNSERLLQPPAVISQDYHDGDGTRNRIRAVENQYSFY
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(1831990..1832267,1844248..1844419,1856559..1856752,1858797..1858964,1859728..1859834,1864539..1864630,1881712..1881813,1908054..1908890))
location: region:1831990-1908890:-1
so has part: feature:1908054-1908890:-1:exon
so has part: feature:1881712-1881813:-1:exon
so has part: feature:1864539-1864630:-1:exon
so has part: feature:1859728-1859834:-1:exon
so has part: feature:1858797-1858964:-1:exon
so has part: feature:1856559-1856752:-1:exon
so has part: feature:1844248-1844419:-1:exon
so has part: feature:1831990-1832267:-1:exon

XP_032901450.1
type: Protein
SIO_000068: ncbiprotein

position:1831990:-1
position: 1831990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1908890:-1
position: 1908890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1908054-1908890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1881712-1881813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1864539-1864630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1859728-1859834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1858797-1858964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1856559-1856752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1844248-1844419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1831990-1832267:-1:exon

sh2b2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: sh2b2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 2
translation: MNGDSGSQDSLQDISDWREFCEVQARAAASDFAQKFRIFISENPHYDSSGIETNFLQHFASHFVVYFAREVSGPYLSDSPSKCSVAPASDIRSCQQPARAAVLQRKAHSDSLPRGDNASNARSYLRHQQVCNMSNLGHSRSSEDVSLSTSARPKFKKGFSLRNMSMCVVDGMKEMLQWRSSAEPLLGARPEGEEDSAGSRLDSEAHDRLSQKLERLRLTKLSSSKVELQDIQREGMLRYMLADDNSLSSSHWHKCRVLLRKAVGIEEERFILEFYAPPKSTKSRVSIPLSAIVEVRTTMPLEMPDRDNTFVLKVENGVEYILETIDSLQKHSWVADIQDCMDPGDSEEDLELTSLQPAVTVAGRESPSIPPCTCAFTLDPPAQAPDTTCTDPDSAPIGSPVRPKDVSVQQPLAHVPLENFLQTLHSETPSTAVSTDATEQPALESQLCSYPWFHGTLPRVKAAQLVLAGGKRSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSVNETGQCHVQHLWFQSILDMLKHFHTHPIPLESGGSADITLRTYVLATQSFSEMSAPSPSAPTQPNSRSDVFQTQHYFTSALAGNLQAVAQAEDPSMAHRLEAAVTAHNSERLLQPPAVISQDYHDGDGTRNRIRAVENQYSFY
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(1831990..1832267,1844248..1844419,1856559..1856752,1858797..1858964,1859728..1859834,1864539..1864630,1881712..1881813,1908054..1908890))
location: region:1831990-1908890:-1
so has part: feature:1908054-1908890:-1:exon
so has part: feature:1881712-1881813:-1:exon
so has part: feature:1864539-1864630:-1:exon
so has part: feature:1859728-1859834:-1:exon
so has part: feature:1858797-1858964:-1:exon
so has part: feature:1856559-1856752:-1:exon
so has part: feature:1844248-1844419:-1:exon
so has part: feature:1831990-1832267:-1:exon

XP_032901451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1908054-1908890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1881712-1881813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1864539-1864630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1859728-1859834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1858797-1858964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1856559-1856752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1844248-1844419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1831990-1832267:-1:exon

sh2b2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: sh2b2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 2
translation: MNGDSGSQDSLQDISDWREFCEVQARAAASDFAQKFRIFISENPHYDSSGIETNFLQHFASHFVVYFAREVSGPYLSDSPSKCSVAPASDIRSCQQPARAAVLQRKAHSDSLPRGDNASNARSYLRHQQVCNMSNLGHSRSSEDVSLSTSARPKFKKGFSLRNMSMCVVDGMKEMLQWRSSAEPLLGARPEGEEDSAGSRLDSEAHDRLSQKLERLRLTKLSSSKVELQDIQREGMLRYMLADDNSLSSSHWHKCRVLLRKAVGIEEERFILEFYAPPKSTKSRVSIPLSAIVEVRTTMPLEMPDRDNTFVLKVENGVEYILETIDSLQKHSWVADIQDCMDPGDSEEDLELTSLQPAVTVAGRESPSIPPCTCAFTLDPPAQAPDTTCTDPDSAPIGSPVRPKDVSVQQPLAHVPLENFLQTLHSETPSTAVSTDATEQPALESQLCSYPWFHGTLPRVKAAQLVLAGGKRSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSVNETGQCHVQHLWFQSILDMLKHFHTHPIPLESGGSADITLRTYVLATQSFSEMSAPSPSAPTQPNSRSDVFQTQHYFTSALAGNLQAVAQAEDPSMAHRLEAAVTAHNSERLLQPPAVISQDYHDGDGTRNRIRAVENQYSFY
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(1831990..1832267,1844248..1844419,1856559..1856752,1858797..1858964,1859728..1859834,1864539..1864630,1881712..1881813,1908054..1908890))
location: region:1831990-1908890:-1
so has part: feature:1908054-1908890:-1:exon
so has part: feature:1881712-1881813:-1:exon
so has part: feature:1864539-1864630:-1:exon
so has part: feature:1859728-1859834:-1:exon
so has part: feature:1858797-1858964:-1:exon
so has part: feature:1856559-1856752:-1:exon
so has part: feature:1844248-1844419:-1:exon
so has part: feature:1831990-1832267:-1:exon

XP_032901452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1908054-1908890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1881712-1881813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1864539-1864630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1859728-1859834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1858797-1858964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1856559-1856752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1844248-1844419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1831990-1832267:-1:exon

sh2b2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: sh2b2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 2
translation: MNGDSGSQDSLQDISDWREFCEVQARAAASDFAQKFRIFISENPHYDSSGIETNFLQHFASHFVVYFAREVSGPYLSDSPSKCSVAPASDIRSCQQPARAAVLQRKAHSDSLPRGDNASNARSYLRHQQVCNMSNLGHSRSSEDVSLSTSARPKFKKGFSLRNMSMCVVDGMKEMLQWRSSAEPLLGARPEGEEDSAGSRLDSEAHDRLSQKLERLRLTKLSSSKVELQDIQREGMLRYMLADDNSLSSSHWHKCRVLLRKAVGIEEERFILEFYAPPKSTKSRVSIPLSAIVEVRTTMPLEMPDRDNTFVLKVENGVEYILETIDSLQKHSWVADIQDCMDPGDSEEDLELTSLQPAVTVAGRESPSIPPCTCAFTLDPPAQAPDTTCTDPDSAPIGSPVRPKDVSVQQPLAHVPLENFLQTLHSETPSTAVSTDATEQPALESQLCSYPWFHGTLPRVKAAQLVLAGGKRSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSVNETGQCHVQHLWFQSILDMLKHFHTHPIPLESGGSADITLRTYVLATQSFSEMSAPSPSAPTQPNSRSDVFQTQHYFTSALAGNLQAVAQAEDPSMAHRLEAAVTAHNSERLLQPPAVISQDYHDGDGTRNRIRAVENQYSFY
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(1831990..1832267,1844248..1844419,1856559..1856752,1858797..1858964,1859728..1859834,1864539..1864630,1881712..1881813,1908054..1908890))
location: region:1831990-1908890:-1
so has part: feature:1908054-1908890:-1:exon
so has part: feature:1881712-1881813:-1:exon
so has part: feature:1864539-1864630:-1:exon
so has part: feature:1859728-1859834:-1:exon
so has part: feature:1858797-1858964:-1:exon
so has part: feature:1856559-1856752:-1:exon
so has part: feature:1844248-1844419:-1:exon
so has part: feature:1831990-1832267:-1:exon

XP_032901453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1908054-1908890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1881712-1881813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1864539-1864630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1859728-1859834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1858797-1858964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1856559-1856752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1844248-1844419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1831990-1832267:-1:exon

sh2b2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: sh2b2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 2
translation: MNGDSGSQDSLQDISDWREFCEVQARAAASDFAQKFRIFISENPHYDSSGIETNFLQHFASHFVVYFAREVSGPYLSDSPSKCSVAPASDIRSCQQPARAAVLQRKAHSDSLPRGDNASNARSYLRHQQVCNMSNLGHSRSSEDVSLSTSARPKFKKGFSLRNMSMCVVDGMKEMLQWRSSAEPLLGARPEGEEDSAGSRLDSEAHDRLSQKLERLRLTKLSSSKVELQDIQREGMLRYMLADDNSLSSSHWHKCRVLLRKAVGIEEERFILEFYAPPKSTKSRVSIPLSAIVEVRTTMPLEMPDRDNTFVLKVENGVEYILETIDSLQKHSWVADIQDCMDPGDSEEDLELTSLQPAVTVAGRESPSIPPCTCAFTLDPPAQAPDTTCTDPDSAPIGSPVRPKDVSVQQPLAHVPLENFLQTLHSETPSTAVSTDATEQPALESQLCSYPWFHGTLPRVKAAQLVLAGGKRSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSVNETGQCHVQHLWFQSILDMLKHFHTHPIPLESGGSADITLRTYVLATQSFSEMSAPSPSAPTQPNSRSDVFQTQHYFTSALAGNLQAVAQAEDPSMAHRLEAAVTAHNSERLLQPPAVISQDYHDGDGTRNRIRAVENQYSFY
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(1831990..1832267,1844248..1844419,1856559..1856752,1858797..1858964,1859728..1859834,1864539..1864630,1881712..1881813,1908054..1908890))
location: region:1831990-1908890:-1
so has part: feature:1908054-1908890:-1:exon
so has part: feature:1881712-1881813:-1:exon
so has part: feature:1864539-1864630:-1:exon
so has part: feature:1859728-1859834:-1:exon
so has part: feature:1858797-1858964:-1:exon
so has part: feature:1856559-1856752:-1:exon
so has part: feature:1844248-1844419:-1:exon
so has part: feature:1831990-1832267:-1:exon

XP_032901454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1908054-1908890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1881712-1881813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1864539-1864630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1859728-1859834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1858797-1858964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1856559-1856752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1844248-1844419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1831990-1832267:-1:exon

sh2b2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: sh2b2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2B adapter protein 2
translation: MNGDSGSQDSLQDISDWREFCEVQARAAASDFAQKFRIFISENPHYDSSGIETNFLQHFASHFVVYFAREVSGPYLSDSPSKCSVAPASDIRSCQQPARAAVLQRKAHSDSLPRGDNASNARSYLRHQQVCNMSNLGHSRSSEDVSLSTSARPKFKKGFSLRNMSMCVVDGMKEMLQWRSSAEPLLGARPEGEEDSAGSRLDSEAHDRLSQKLERLRLTKLSSSKVELQDIQREGMLRYMLADDNSLSSSHWHKCRVLLRKAVGIEEERFILEFYAPPKSTKSRVSIPLSAIVEVRTTMPLEMPDRDNTFVLKVENGVEYILETIDSLQKHSWVADIQDCMDPGDSEEDLELTSLQPAVTVAGRESPSIPPCTCAFTLDPPAQAPDTTCTDPDSAPIGSPVRPKDVSVQQPLAHVPLENFLQTLHSETPSTAVSTDATEQPALESQLCSYPWFHGTLPRVKAAQLVLAGGKRSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSVNETGQCHVQHLWFQSILDMLKHFHTHPIPLESGGSADITLRTYVLATQSFSEMSAPSPSAPTQPNSRSDVFQTQHYFTSALAGNLQAVAQAEDPSMAHRLEAAVTAHNSERLLQPPAVISQDYHDGDGTRNRIRAVENQYSFY
SIO_010081: sh2b2
subclass of: SO_0000673
so part of: sh2b2
location: complement(join(1831990..1832267,1844248..1844419,1856559..1856752,1858797..1858964,1859728..1859834,1864539..1864630,1881712..1881813,1908054..1908890))
location: region:1831990-1908890:-1
so has part: feature:1908054-1908890:-1:exon
so has part: feature:1881712-1881813:-1:exon
so has part: feature:1864539-1864630:-1:exon
so has part: feature:1859728-1859834:-1:exon
so has part: feature:1858797-1858964:-1:exon
so has part: feature:1856559-1856752:-1:exon
so has part: feature:1844248-1844419:-1:exon
so has part: feature:1831990-1832267:-1:exon

XP_032901455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1908054-1908890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1881712-1881813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1864539-1864630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1859728-1859834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1858797-1858964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1856559-1856752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1844248-1844419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1831990-1832267:-1:exon

sh2b2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: sh2b2
product: SH2B adaptor protein 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416049.1
SIO_010081: sh2b2
so part of: sh2b2
location: complement(join(1832132..1832267,1837161..1837276,1844248..1844419,1856559..1856752,1858797..1858964,1859728..1859834,1864539..1864630,1881712..1881813,1908054..1908917,1912562..1912702,1918057..1918161))
location: region:1832132-1918161:-1
so has part: feature:1918057-1918161:-1:exon
so has part: feature:1912562-1912702:-1:exon
so has part: feature:1908054-1908917:-1:exon
so has part: feature:1881712-1881813:-1:exon
so has part: feature:1864539-1864630:-1:exon
so has part: feature:1859728-1859834:-1:exon
so has part: feature:1858797-1858964:-1:exon
so has part: feature:1856559-1856752:-1:exon
so has part: feature:1844248-1844419:-1:exon
so has part: feature:1837161-1837276:-1:exon
so has part: feature:1832132-1832267:-1:exon

position:1832132:-1
position: 1832132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1918057-1918161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1912562-1912702:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1908054-1908917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1881712-1881813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1864539-1864630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1859728-1859834:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1858797-1858964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1856559-1856752:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1844248-1844419:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1837161-1837276:-1:exon

position:1837161:-1
position: 1837161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1837276:-1
position: 1837276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1832132-1832267:-1:exon

cux1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1925941..2371389)
location: region:1925941-2371389:-1
so has part: feature:1925941-2371389:-1:exon
subclass of: SO_0000010

116988719
type: Gene
SIO_000068: ncbigene

position:1925941:-1
position: 1925941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2371389:-1
position: 2371389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1925941-2371389:-1:exon

cux1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cux1
product: cut like homeobox 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033045571.1
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(1925941..1927046,1930165..1930229,1937036..1937116,1937298..1937354,1942597..1942680,1944333..1944449,1946558..1946661,1947577..1947640,1965924..1966060,2118069..2118165,2128796..2128844,2131010..2131068,2131372..2131560,2140493..2140597,2142544..2142592,2192148..2192214,2198991..2199067,2208659..2208782,2212602..2212739,2217293..2217371,2237178..2237225,2284825..2284935,2371196..2371389))
location: region:1925941-2371389:-1
so has part: feature:2371196-2371389:-1:exon
so has part: feature:2284825-2284935:-1:exon
so has part: feature:2237178-2237225:-1:exon
so has part: feature:2217293-2217371:-1:exon
so has part: feature:2212602-2212739:-1:exon
so has part: feature:2208659-2208782:-1:exon
so has part: feature:2198991-2199067:-1:exon
so has part: feature:2192148-2192214:-1:exon
so has part: feature:2142544-2142592:-1:exon
so has part: feature:2140493-2140597:-1:exon
so has part: feature:2131372-2131560:-1:exon
so has part: feature:2131010-2131068:-1:exon
so has part: feature:2128796-2128844:-1:exon
so has part: feature:2118069-2118165:-1:exon
so has part: feature:1965924-1966060:-1:exon
so has part: feature:1947577-1947640:-1:exon
so has part: feature:1946558-1946661:-1:exon
so has part: feature:1944333-1944449:-1:exon
so has part: feature:1942597-1942680:-1:exon
so has part: feature:1937298-1937354:-1:exon
so has part: feature:1937036-1937116:-1:exon
so has part: feature:1930165-1930229:-1:exon
so has part: feature:1925941-1927046:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2371196-2371389:-1:exon

position:2371196:-1
position: 2371196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2284825-2284935:-1:exon

position:2284825:-1
position: 2284825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2284935:-1
position: 2284935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2237178-2237225:-1:exon

position:2237178:-1
position: 2237178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2237225:-1
position: 2237225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2217293-2217371:-1:exon

position:2217293:-1
position: 2217293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2217371:-1
position: 2217371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2212602-2212739:-1:exon

position:2212602:-1
position: 2212602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2212739:-1
position: 2212739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2208659-2208782:-1:exon

position:2208659:-1
position: 2208659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2208782:-1
position: 2208782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2198991-2199067:-1:exon

position:2198991:-1
position: 2198991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2199067:-1
position: 2199067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2192148-2192214:-1:exon

position:2192148:-1
position: 2192148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2192214:-1
position: 2192214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2142544-2142592:-1:exon

position:2142544:-1
position: 2142544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2142592:-1
position: 2142592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2140493-2140597:-1:exon

position:2140493:-1
position: 2140493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2140597:-1
position: 2140597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2131372-2131560:-1:exon

position:2131372:-1
position: 2131372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2131560:-1
position: 2131560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2131010-2131068:-1:exon

position:2131010:-1
position: 2131010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2131068:-1
position: 2131068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2128796-2128844:-1:exon

position:2128796:-1
position: 2128796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2128844:-1
position: 2128844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2118069-2118165:-1:exon

position:2118069:-1
position: 2118069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2118165:-1
position: 2118165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1965924-1966060:-1:exon

position:1965924:-1
position: 1965924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1966060:-1
position: 1966060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1947577-1947640:-1:exon

position:1947577:-1
position: 1947577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1947640:-1
position: 1947640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1946558-1946661:-1:exon

position:1946558:-1
position: 1946558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1946661:-1
position: 1946661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1944333-1944449:-1:exon

position:1944333:-1
position: 1944333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1944449:-1
position: 1944449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1942597-1942680:-1:exon

position:1942597:-1
position: 1942597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1942680:-1
position: 1942680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1937298-1937354:-1:exon

position:1937298:-1
position: 1937298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1937354:-1
position: 1937354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1937036-1937116:-1:exon

position:1937036:-1
position: 1937036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1937116:-1
position: 1937116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1930165-1930229:-1:exon

position:1930165:-1
position: 1930165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1930229:-1
position: 1930229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1925941-1927046:-1:exon

position:1927046:-1
position: 1927046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cux1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CASP isoform X6
translation: MAANVGSMFQYWKKFDLQLLQRELDTTATVLANRQDESEQSRKRLIDESREFKKSTPEDLRKLVAPLLKSFQAEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENHKLRETLEEYNKEFAEVKNQEVTIKALKEKIKEYEQTLSSRAEILALEKEQKLQNDFSEKERKLQETQTSLASKFDEADHKVQALQSVLESTQTELFDLKTKYDEESTAKADEIEMIMTDLERANQRAEVVQREAESLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVELAAKDREVMQLVEDVQRLQANLTKLHETSTNQVSQLEQQLTAKNSTLKQLEEKLKDQSDYEEVKKELSILKSMEFVPSEGSGAQDTSKTLEVLLLEKNRSLQSENATLRITNSDLSARCAKLQIQLTEVVKTTGGQKELIIKLEQDLSTIQSMSSLQRPDAEGADVSNMEKIPEPIKEATALFASPSSEVPQGQMDSLLSIISSQRERFRARNQELESDNRMMQQTLHALQSELDNLRADNIKLYEKIKFLQSYPGRGGSSDDTELRYSSQYEERLDPFASFSRKERQRRYLSLSPWDKATLSMGRIILSNKLARTIAFFYTVLLHCLVFLVLYKVAWSESVGRDCATYCAKKYSDHLHKFHENGNEKEMWQ
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(1926986..1927046,1930165..1930229,1937036..1937116,1937298..1937354,1942597..1942680,1944333..1944449,1946558..1946661,1947577..1947640,1965924..1966060,2118069..2118165,2128796..2128844,2131010..2131068,2131372..2131560,2140493..2140597,2142544..2142592,2192148..2192214,2198991..2199067,2208659..2208782,2212602..2212739,2217293..2217371,2237178..2237225,2284825..2284935,2371196..2371258))
location: region:1926986-2371258:-1
so has part: feature:2371196-2371258:-1:exon
so has part: feature:2284825-2284935:-1:exon
so has part: feature:2237178-2237225:-1:exon
so has part: feature:2217293-2217371:-1:exon
so has part: feature:2212602-2212739:-1:exon
so has part: feature:2208659-2208782:-1:exon
so has part: feature:2198991-2199067:-1:exon
so has part: feature:2192148-2192214:-1:exon
so has part: feature:2142544-2142592:-1:exon
so has part: feature:2140493-2140597:-1:exon
so has part: feature:2131372-2131560:-1:exon
so has part: feature:2131010-2131068:-1:exon
so has part: feature:2128796-2128844:-1:exon
so has part: feature:2118069-2118165:-1:exon
so has part: feature:1965924-1966060:-1:exon
so has part: feature:1947577-1947640:-1:exon
so has part: feature:1946558-1946661:-1:exon
so has part: feature:1944333-1944449:-1:exon
so has part: feature:1942597-1942680:-1:exon
so has part: feature:1937298-1937354:-1:exon
so has part: feature:1937036-1937116:-1:exon
so has part: feature:1930165-1930229:-1:exon
so has part: feature:1926986-1927046:-1:exon

XP_032901462.1
type: Protein
SIO_000068: ncbiprotein

position:1926986:-1
position: 1926986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2371258:-1
position: 2371258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2371196-2371258:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2284825-2284935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2237178-2237225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2217293-2217371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2212602-2212739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208659-2208782:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2198991-2199067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2192148-2192214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2142544-2142592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2140493-2140597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2131372-2131560:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2131010-2131068:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2128796-2128844:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2118069-2118165:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1965924-1966060:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1947577-1947640:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1946558-1946661:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1944333-1944449:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1942597-1942680:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1937298-1937354:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1937036-1937116:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1930165-1930229:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1926986-1927046:-1:exon

LOC116988722
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988722
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1981592..1985789
location: region:1981592-1985789:1
so has part: feature:1981592-1985789:1:exon
subclass of: SO_0000011

116988722
type: Gene
SIO_000068: ncbigene

position:1981592:1
position: 1981592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1985789:1
position: 1985789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981592-1985789:1:exon

LOC116988722
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988722
product: uncharacterized LOC116988722
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416051.1
SIO_010081: LOC116988722
subclass of: SO_0000673
so part of: LOC116988722
location: join(1981592..1981604,1985641..1985644,1985684..1985789)
location: region:1981592-1985789:1
so has part: feature:1981592-1981604:1:exon
so has part: feature:1985641-1985644:1:exon
so has part: feature:1985684-1985789:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1981592-1981604:1:exon

position:1981604:1
position: 1981604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1985641-1985644:1:exon

position:1985641:1
position: 1985641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1985644:1
position: 1985644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1985684-1985789:1:exon

position:1985684:1
position: 1985684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988721
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2016946..2028295
location: region:2016946-2028295:1
so has part: feature:2016946-2028295:1:exon
subclass of: SO_0000011

116988721
type: Gene
SIO_000068: ncbigene

position:2016946:1
position: 2016946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2028295:1
position: 2028295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2016946-2028295:1:exon

LOC116988721
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988721
product: uncharacterized LOC116988721
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004416050.1
SIO_010081: LOC116988721
subclass of: SO_0000673
so part of: LOC116988721
location: join(2016946..2016956,2017004..2017008,2028217..2028295)
location: region:2016946-2028295:1
so has part: feature:2016946-2016956:1:exon
so has part: feature:2017004-2017008:1:exon
so has part: feature:2028217-2028295:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2016946-2016956:1:exon

position:2016956:1
position: 2016956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2017004-2017008:1:exon

position:2017004:1
position: 2017004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2017008:1
position: 2017008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2028217-2028295:1:exon

position:2028217:1
position: 2028217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cux1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cux1
product: cut like homeobox 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033045568.1
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(2076476..2077335,2081105..2081206,2104684..2104749,2116739..2117104,2118069..2118165,2128796..2128844,2131010..2131068,2131372..2131560,2140493..2140597,2142544..2142592,2192148..2192214,2198991..2199067,2208659..2208782,2212602..2212739,2217293..2217371,2237178..2237225,2284825..2284935,2371196..2371329))
location: region:2076476-2371329:-1
so has part: feature:2371196-2371329:-1:exon
so has part: feature:2284825-2284935:-1:exon
so has part: feature:2237178-2237225:-1:exon
so has part: feature:2217293-2217371:-1:exon
so has part: feature:2212602-2212739:-1:exon
so has part: feature:2208659-2208782:-1:exon
so has part: feature:2198991-2199067:-1:exon
so has part: feature:2192148-2192214:-1:exon
so has part: feature:2142544-2142592:-1:exon
so has part: feature:2140493-2140597:-1:exon
so has part: feature:2131372-2131560:-1:exon
so has part: feature:2131010-2131068:-1:exon
so has part: feature:2128796-2128844:-1:exon
so has part: feature:2118069-2118165:-1:exon
so has part: feature:2116739-2117104:-1:exon
so has part: feature:2104684-2104749:-1:exon
so has part: feature:2081105-2081206:-1:exon
so has part: feature:2076476-2077335:-1:exon

position:2076476:-1
position: 2076476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2371329:-1
position: 2371329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2371196-2371329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2284825-2284935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2237178-2237225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2217293-2217371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2212602-2212739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208659-2208782:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2198991-2199067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2192148-2192214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2142544-2142592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2140493-2140597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2131372-2131560:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2131010-2131068:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2128796-2128844:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2118069-2118165:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2116739-2117104:-1:exon

position:2116739:-1
position: 2116739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2117104:-1
position: 2117104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2104684-2104749:-1:exon

position:2104684:-1
position: 2104684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2104749:-1
position: 2104749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2081105-2081206:-1:exon

position:2081105:-1
position: 2081105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2081206:-1
position: 2081206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2076476-2077335:-1:exon

position:2077335:-1
position: 2077335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cux1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cux1
product: cut like homeobox 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033045567.1
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(2076476..2077335,2081105..2081206,2116739..2117410,2118069..2118165,2128796..2128844,2131010..2131068,2131372..2131560,2140493..2140597,2142544..2142592,2192148..2192214,2198991..2199067,2208659..2208782,2212602..2212739,2217293..2217371,2237178..2237225,2284825..2284935,2371196..2371329))
location: region:2076476-2371329:-1
so has part: feature:2371196-2371329:-1:exon
so has part: feature:2284825-2284935:-1:exon
so has part: feature:2237178-2237225:-1:exon
so has part: feature:2217293-2217371:-1:exon
so has part: feature:2212602-2212739:-1:exon
so has part: feature:2208659-2208782:-1:exon
so has part: feature:2198991-2199067:-1:exon
so has part: feature:2192148-2192214:-1:exon
so has part: feature:2142544-2142592:-1:exon
so has part: feature:2140493-2140597:-1:exon
so has part: feature:2131372-2131560:-1:exon
so has part: feature:2131010-2131068:-1:exon
so has part: feature:2128796-2128844:-1:exon
so has part: feature:2118069-2118165:-1:exon
so has part: feature:2116739-2117410:-1:exon
so has part: feature:2081105-2081206:-1:exon
so has part: feature:2076476-2077335:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2371196-2371329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2284825-2284935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2237178-2237225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2217293-2217371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2212602-2212739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208659-2208782:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2198991-2199067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2192148-2192214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2142544-2142592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2140493-2140597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2131372-2131560:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2131010-2131068:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2128796-2128844:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2118069-2118165:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2116739-2117410:-1:exon

position:2117410:-1
position: 2117410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2081105-2081206:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2076476-2077335:-1:exon

cux1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cux1
product: cut like homeobox 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033045565.1
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(2076476..2077335,2081105..2081206,2104684..2104749,2116739..2117410,2118069..2118165,2128796..2128844,2131010..2131068,2131372..2131560,2140493..2140597,2142544..2142592,2192148..2192214,2198991..2199067,2208659..2208782,2212602..2212739,2217293..2217371,2237178..2237225,2284825..2284935,2371196..2371329))
location: region:2076476-2371329:-1
so has part: feature:2371196-2371329:-1:exon
so has part: feature:2284825-2284935:-1:exon
so has part: feature:2237178-2237225:-1:exon
so has part: feature:2217293-2217371:-1:exon
so has part: feature:2212602-2212739:-1:exon
so has part: feature:2208659-2208782:-1:exon
so has part: feature:2198991-2199067:-1:exon
so has part: feature:2192148-2192214:-1:exon
so has part: feature:2142544-2142592:-1:exon
so has part: feature:2140493-2140597:-1:exon
so has part: feature:2131372-2131560:-1:exon
so has part: feature:2131010-2131068:-1:exon
so has part: feature:2128796-2128844:-1:exon
so has part: feature:2118069-2118165:-1:exon
so has part: feature:2116739-2117410:-1:exon
so has part: feature:2104684-2104749:-1:exon
so has part: feature:2081105-2081206:-1:exon
so has part: feature:2076476-2077335:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2371196-2371329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2284825-2284935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2237178-2237225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2217293-2217371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2212602-2212739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208659-2208782:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2198991-2199067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2192148-2192214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2142544-2142592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2140493-2140597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2131372-2131560:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2131010-2131068:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2128796-2128844:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2118069-2118165:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2116739-2117410:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2104684-2104749:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2081105-2081206:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2076476-2077335:-1:exon

cux1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cux1
product: cut like homeobox 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033045569.1
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(2076476..2077335,2081105..2081206,2104684..2104749,2116739..2117410,2118069..2118165,2128796..2128844,2131010..2131068,2131372..2131560,2140493..2140597,2142544..2142592,2192148..2192214,2198991..2199067,2208659..2208782,2212602..2212739,2217293..2217371,2237178..2237225,2284825..2284935,2285873..2286019))
location: region:2076476-2286019:-1
so has part: feature:2285873-2286019:-1:exon
so has part: feature:2284825-2284935:-1:exon
so has part: feature:2237178-2237225:-1:exon
so has part: feature:2217293-2217371:-1:exon
so has part: feature:2212602-2212739:-1:exon
so has part: feature:2208659-2208782:-1:exon
so has part: feature:2198991-2199067:-1:exon
so has part: feature:2192148-2192214:-1:exon
so has part: feature:2142544-2142592:-1:exon
so has part: feature:2140493-2140597:-1:exon
so has part: feature:2131372-2131560:-1:exon
so has part: feature:2131010-2131068:-1:exon
so has part: feature:2128796-2128844:-1:exon
so has part: feature:2118069-2118165:-1:exon
so has part: feature:2116739-2117410:-1:exon
so has part: feature:2104684-2104749:-1:exon
so has part: feature:2081105-2081206:-1:exon
so has part: feature:2076476-2077335:-1:exon

position:2286019:-1
position: 2286019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2285873-2286019:-1:exon

position:2285873:-1
position: 2285873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2284825-2284935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2237178-2237225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2217293-2217371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2212602-2212739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208659-2208782:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2198991-2199067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2192148-2192214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2142544-2142592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2140493-2140597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2131372-2131560:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2131010-2131068:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2128796-2128844:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2118069-2118165:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2116739-2117410:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2104684-2104749:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2081105-2081206:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2076476-2077335:-1:exon

cux1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cux1
product: cut like homeobox 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033045570.1
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(2076476..2077335,2081105..2081206,2104684..2104749,2116739..2117410,2118069..2118165,2128796..2128844,2131010..2131068,2131372..2131560,2140493..2140597,2142544..2142592,2192148..2192214,2198991..2199067,2208659..2208782,2212602..2212739,2217293..2217371,2237178..2237225,2284825..2284935,2285178..2285334))
location: region:2076476-2285334:-1
so has part: feature:2285178-2285334:-1:exon
so has part: feature:2284825-2284935:-1:exon
so has part: feature:2237178-2237225:-1:exon
so has part: feature:2217293-2217371:-1:exon
so has part: feature:2212602-2212739:-1:exon
so has part: feature:2208659-2208782:-1:exon
so has part: feature:2198991-2199067:-1:exon
so has part: feature:2192148-2192214:-1:exon
so has part: feature:2142544-2142592:-1:exon
so has part: feature:2140493-2140597:-1:exon
so has part: feature:2131372-2131560:-1:exon
so has part: feature:2131010-2131068:-1:exon
so has part: feature:2128796-2128844:-1:exon
so has part: feature:2118069-2118165:-1:exon
so has part: feature:2116739-2117410:-1:exon
so has part: feature:2104684-2104749:-1:exon
so has part: feature:2081105-2081206:-1:exon
so has part: feature:2076476-2077335:-1:exon

position:2285334:-1
position: 2285334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2285178-2285334:-1:exon

position:2285178:-1
position: 2285178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2284825-2284935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2237178-2237225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2217293-2217371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2212602-2212739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208659-2208782:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2198991-2199067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2192148-2192214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2142544-2142592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2140493-2140597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2131372-2131560:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2131010-2131068:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2128796-2128844:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2118069-2118165:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2116739-2117410:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2104684-2104749:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2081105-2081206:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2076476-2077335:-1:exon

cux1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cux1
product: cut like homeobox 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033045566.1
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(2076476..2077335,2081105..2081206,2104684..2104749,2116739..2117410,2118069..2118165,2128796..2128844,2131010..2131068,2131372..2131560,2140493..2140597,2142544..2142592,2192148..2192214,2198991..2199067,2208659..2208782,2212602..2212739,2217293..2217371,2237178..2237225,2284825..2284935,2285134..2285325))
location: region:2076476-2285325:-1
so has part: feature:2285134-2285325:-1:exon
so has part: feature:2284825-2284935:-1:exon
so has part: feature:2237178-2237225:-1:exon
so has part: feature:2217293-2217371:-1:exon
so has part: feature:2212602-2212739:-1:exon
so has part: feature:2208659-2208782:-1:exon
so has part: feature:2198991-2199067:-1:exon
so has part: feature:2192148-2192214:-1:exon
so has part: feature:2142544-2142592:-1:exon
so has part: feature:2140493-2140597:-1:exon
so has part: feature:2131372-2131560:-1:exon
so has part: feature:2131010-2131068:-1:exon
so has part: feature:2128796-2128844:-1:exon
so has part: feature:2118069-2118165:-1:exon
so has part: feature:2116739-2117410:-1:exon
so has part: feature:2104684-2104749:-1:exon
so has part: feature:2081105-2081206:-1:exon
so has part: feature:2076476-2077335:-1:exon

position:2285325:-1
position: 2285325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2285134-2285325:-1:exon

position:2285134:-1
position: 2285134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2284825-2284935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2237178-2237225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2217293-2217371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2212602-2212739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208659-2208782:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2198991-2199067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2192148-2192214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2142544-2142592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2140493-2140597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2131372-2131560:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2131010-2131068:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2128796-2128844:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2118069-2118165:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2116739-2117410:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2104684-2104749:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2081105-2081206:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2076476-2077335:-1:exon

cux1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein cut-like 1 isoform X4
translation: MAANVGSMFQYWKKFDLQLLQRELDTTATVLANRQDESEQSRKRLIDESREFKKSTPEDLRKLVAPLLKSFQAEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENHKLRETLEEYNKEFAEVKNQEVTIKALKEKIKEYEQTLSSRAEILALEKEQKLQNDFSEKERKLQETQTSLASKFDEADHKVQALQSVLESTQTELFDLKTKYDEESTAKADEIEMIMTDLERANQRAEVVQREAESLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVELAAKDREVMQLVEDVQRLQANLTKLHETSTNQVSQLEQQLTAKNSTLKQLEEKLKDQSDYEEVKKELSILKSMEFVPSEGSGAQDTSKTLEVLLLEKNRSLQSENATLRITNSDLSGPYSTNSISSPSPIPPSSDVNGMIPSPSQSESAGSISEGEDLDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQREVPGQNIQRMLQEVKKRRYGSEGNITTRIRTPETGSDEAIKSILEQAKRELQVQKNVDSTQPPCTSSSGGSDEAIWSILEQARREMEAQKAGLEPTPKPAPVAHTDVTLHSSKVASSSSIFSSLTVMKKPSIMDSSTIATQTSHGLKKETVHDSCASEHHGIAETPHNMLKQVKNELGRGSTWRDQWWNTVCPDRRNSTFAEDGRAEENSSGRERFNNPGRHVDGNPLQGATSSDLWKDWQNAESPYSQASDLGTVVASSSVTPQSSPLPSSPLIPISKPHKPSVPPLTPEQYEIYMYQEVDTAELTRQVKEKLAKNGICQRIFGEKVNYFLKESCF
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(2076491..2077335,2081105..2081206,2104684..2104749,2116739..2117104,2118069..2118165,2128796..2128844,2131010..2131068,2131372..2131560,2140493..2140597,2142544..2142592,2192148..2192214,2198991..2199067,2208659..2208782,2212602..2212739,2217293..2217371,2237178..2237225,2284825..2284935,2371196..2371258))
location: region:2076491-2371258:-1
so has part: feature:2371196-2371258:-1:exon
so has part: feature:2284825-2284935:-1:exon
so has part: feature:2237178-2237225:-1:exon
so has part: feature:2217293-2217371:-1:exon
so has part: feature:2212602-2212739:-1:exon
so has part: feature:2208659-2208782:-1:exon
so has part: feature:2198991-2199067:-1:exon
so has part: feature:2192148-2192214:-1:exon
so has part: feature:2142544-2142592:-1:exon
so has part: feature:2140493-2140597:-1:exon
so has part: feature:2131372-2131560:-1:exon
so has part: feature:2131010-2131068:-1:exon
so has part: feature:2128796-2128844:-1:exon
so has part: feature:2118069-2118165:-1:exon
so has part: feature:2116739-2117104:-1:exon
so has part: feature:2104684-2104749:-1:exon
so has part: feature:2081105-2081206:-1:exon
so has part: feature:2076491-2077335:-1:exon

XP_032901459.1
type: Protein
SIO_000068: ncbiprotein

position:2076491:-1
position: 2076491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2371196-2371258:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2284825-2284935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2237178-2237225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2217293-2217371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2212602-2212739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208659-2208782:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2198991-2199067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2192148-2192214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2142544-2142592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2140493-2140597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2131372-2131560:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2131010-2131068:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2128796-2128844:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2118069-2118165:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2116739-2117104:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2104684-2104749:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2081105-2081206:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2076491-2077335:-1:exon

cux1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein cut-like 1 isoform X3
translation: MAANVGSMFQYWKKFDLQLLQRELDTTATVLANRQDESEQSRKRLIDESREFKKSTPEDLRKLVAPLLKSFQAEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENHKLRETLEEYNKEFAEVKNQEVTIKALKEKIKEYEQTLSSRAEILALEKEQKLQNDFSEKERKLQETQTSLASKFDEADHKVQALQSVLESTQTELFDLKTKYDEESTAKADEIEMIMTDLERANQRAEVVQREAESLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVELAAKDREVMQLVEDVQRLQANLTKLHETSTNQVSQLEQQLTAKNSTLKQLEEKLKDQSDYEEVKKELSILKSMEFVPSEGSGAQDTSKTLEVLLLEKNRSLQSENATLRITNSDLSGSAGRNGNDRLESLRPSTSPTSPPSKLLRSASEQASSANGTHQFSPTVLGQDFFSSSLTSSPIPLASAGKFALNSLLQRQLMQSFYSKAMQDAGSTTMLFPTGPYSTNSISSPSPIPPSSDVNGMIPSPSQSESAGSISEGEDLDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRGNITTRIRTPETGSDEAIKSILEQAKRELQVQKNVDSTQPPCTSSSGGSDEAIWSILEQARREMEAQKAGLEPTPKPAPVAHTDVTLHSSKVASSSSIFSSLTVMKKPSIMDSSTIATQTSHGLKKETVHDSCASEHHGIAETPHNMLKQVKNELGRGSTWRDQWWNTVCPDRRNSTFAEDGRAEENSSGRERFNNPGRHVDGNPLQGATSSDLWKDWQNAESPYSQASDLGTVVASSSVTPQSSPLPSSPLIPISKPHKPSVPPLTPEQYEIYMYQEVDTAELTRQVKEKLAKNGICQRIFGEKVNYFLKESCF
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(2076491..2077335,2081105..2081206,2116739..2117410,2118069..2118165,2128796..2128844,2131010..2131068,2131372..2131560,2140493..2140597,2142544..2142592,2192148..2192214,2198991..2199067,2208659..2208782,2212602..2212739,2217293..2217371,2237178..2237225,2284825..2284935,2371196..2371258))
location: region:2076491-2371258:-1
so has part: feature:2371196-2371258:-1:exon
so has part: feature:2284825-2284935:-1:exon
so has part: feature:2237178-2237225:-1:exon
so has part: feature:2217293-2217371:-1:exon
so has part: feature:2212602-2212739:-1:exon
so has part: feature:2208659-2208782:-1:exon
so has part: feature:2198991-2199067:-1:exon
so has part: feature:2192148-2192214:-1:exon
so has part: feature:2142544-2142592:-1:exon
so has part: feature:2140493-2140597:-1:exon
so has part: feature:2131372-2131560:-1:exon
so has part: feature:2131010-2131068:-1:exon
so has part: feature:2128796-2128844:-1:exon
so has part: feature:2118069-2118165:-1:exon
so has part: feature:2116739-2117410:-1:exon
so has part: feature:2081105-2081206:-1:exon
so has part: feature:2076491-2077335:-1:exon

XP_032901458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2371196-2371258:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2284825-2284935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2237178-2237225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2217293-2217371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2212602-2212739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208659-2208782:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2198991-2199067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2192148-2192214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2142544-2142592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2140493-2140597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2131372-2131560:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2131010-2131068:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2128796-2128844:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2118069-2118165:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2116739-2117410:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2081105-2081206:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2076491-2077335:-1:exon

cux1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein cut-like 1 isoform X1
translation: MAANVGSMFQYWKKFDLQLLQRELDTTATVLANRQDESEQSRKRLIDESREFKKSTPEDLRKLVAPLLKSFQAEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENHKLRETLEEYNKEFAEVKNQEVTIKALKEKIKEYEQTLSSRAEILALEKEQKLQNDFSEKERKLQETQTSLASKFDEADHKVQALQSVLESTQTELFDLKTKYDEESTAKADEIEMIMTDLERANQRAEVVQREAESLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVELAAKDREVMQLVEDVQRLQANLTKLHETSTNQVSQLEQQLTAKNSTLKQLEEKLKDQSDYEEVKKELSILKSMEFVPSEGSGAQDTSKTLEVLLLEKNRSLQSENATLRITNSDLSGSAGRNGNDRLESLRPSTSPTSPPSKLLRSASEQASSANGTHQFSPTVLGQDFFSSSLTSSPIPLASAGKFALNSLLQRQLMQSFYSKAMQDAGSTTMLFPTGPYSTNSISSPSPIPPSSDVNGMIPSPSQSESAGSISEGEDLDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQREVPGQNIQRMLQEVKKRRYGSEGNITTRIRTPETGSDEAIKSILEQAKRELQVQKNVDSTQPPCTSSSGGSDEAIWSILEQARREMEAQKAGLEPTPKPAPVAHTDVTLHSSKVASSSSIFSSLTVMKKPSIMDSSTIATQTSHGLKKETVHDSCASEHHGIAETPHNMLKQVKNELGRGSTWRDQWWNTVCPDRRNSTFAEDGRAEENSSGRERFNNPGRHVDGNPLQGATSSDLWKDWQNAESPYSQASDLGTVVASSSVTPQSSPLPSSPLIPISKPHKPSVPPLTPEQYEIYMYQEVDTAELTRQVKEKLAKNGICQRIFGEKVNYFLKESCF
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(2076491..2077335,2081105..2081206,2104684..2104749,2116739..2117410,2118069..2118165,2128796..2128844,2131010..2131068,2131372..2131560,2140493..2140597,2142544..2142592,2192148..2192214,2198991..2199067,2208659..2208782,2212602..2212739,2217293..2217371,2237178..2237225,2284825..2284935,2371196..2371258))
location: region:2076491-2371258:-1
so has part: feature:2371196-2371258:-1:exon
so has part: feature:2284825-2284935:-1:exon
so has part: feature:2237178-2237225:-1:exon
so has part: feature:2217293-2217371:-1:exon
so has part: feature:2212602-2212739:-1:exon
so has part: feature:2208659-2208782:-1:exon
so has part: feature:2198991-2199067:-1:exon
so has part: feature:2192148-2192214:-1:exon
so has part: feature:2142544-2142592:-1:exon
so has part: feature:2140493-2140597:-1:exon
so has part: feature:2131372-2131560:-1:exon
so has part: feature:2131010-2131068:-1:exon
so has part: feature:2128796-2128844:-1:exon
so has part: feature:2118069-2118165:-1:exon
so has part: feature:2116739-2117410:-1:exon
so has part: feature:2104684-2104749:-1:exon
so has part: feature:2081105-2081206:-1:exon
so has part: feature:2076491-2077335:-1:exon

XP_032901456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2371196-2371258:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2284825-2284935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2237178-2237225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2217293-2217371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2212602-2212739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208659-2208782:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2198991-2199067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2192148-2192214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2142544-2142592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2140493-2140597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2131372-2131560:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2131010-2131068:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2128796-2128844:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2118069-2118165:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2116739-2117410:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2104684-2104749:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2081105-2081206:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2076491-2077335:-1:exon

cux1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein cut-like 1 isoform X2
translation: MQLRELDTTATVLANRQDESEQSRKRLIDESREFKKSTPEDLRKLVAPLLKSFQAEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENHKLRETLEEYNKEFAEVKNQEVTIKALKEKIKEYEQTLSSRAEILALEKEQKLQNDFSEKERKLQETQTSLASKFDEADHKVQALQSVLESTQTELFDLKTKYDEESTAKADEIEMIMTDLERANQRAEVVQREAESLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVELAAKDREVMQLVEDVQRLQANLTKLHETSTNQVSQLEQQLTAKNSTLKQLEEKLKDQSDYEEVKKELSILKSMEFVPSEGSGAQDTSKTLEVLLLEKNRSLQSENATLRITNSDLSGSAGRNGNDRLESLRPSTSPTSPPSKLLRSASEQASSANGTHQFSPTVLGQDFFSSSLTSSPIPLASAGKFALNSLLQRQLMQSFYSKAMQDAGSTTMLFPTGPYSTNSISSPSPIPPSSDVNGMIPSPSQSESAGSISEGEDLDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQREVPGQNIQRMLQEVKKRRYGSEGNITTRIRTPETGSDEAIKSILEQAKRELQVQKNVDSTQPPCTSSSGGSDEAIWSILEQARREMEAQKAGLEPTPKPAPVAHTDVTLHSSKVASSSSIFSSLTVMKKPSIMDSSTIATQTSHGLKKETVHDSCASEHHGIAETPHNMLKQVKNELGRGSTWRDQWWNTVCPDRRNSTFAEDGRAEENSSGRERFNNPGRHVDGNPLQGATSSDLWKDWQNAESPYSQASDLGTVVASSSVTPQSSPLPSSPLIPISKPHKPSVPPLTPEQYEIYMYQEVDTAELTRQVKEKLAKNGICQRIFGEKVNYFLKESCF
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(2076491..2077335,2081105..2081206,2104684..2104749,2116739..2117410,2118069..2118165,2128796..2128844,2131010..2131068,2131372..2131560,2140493..2140597,2142544..2142592,2192148..2192214,2198991..2199067,2208659..2208782,2212602..2212739,2217293..2217371,2237178..2237225,2284825..2284935,2285134..2285142))
location: region:2076491-2285142:-1
so has part: feature:2285134-2285142:-1:exon
so has part: feature:2284825-2284935:-1:exon
so has part: feature:2237178-2237225:-1:exon
so has part: feature:2217293-2217371:-1:exon
so has part: feature:2212602-2212739:-1:exon
so has part: feature:2208659-2208782:-1:exon
so has part: feature:2198991-2199067:-1:exon
so has part: feature:2192148-2192214:-1:exon
so has part: feature:2142544-2142592:-1:exon
so has part: feature:2140493-2140597:-1:exon
so has part: feature:2131372-2131560:-1:exon
so has part: feature:2131010-2131068:-1:exon
so has part: feature:2128796-2128844:-1:exon
so has part: feature:2118069-2118165:-1:exon
so has part: feature:2116739-2117410:-1:exon
so has part: feature:2104684-2104749:-1:exon
so has part: feature:2081105-2081206:-1:exon
so has part: feature:2076491-2077335:-1:exon

XP_032901457.1
type: Protein
SIO_000068: ncbiprotein

position:2285142:-1
position: 2285142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2285134-2285142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2284825-2284935:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2237178-2237225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2217293-2217371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2212602-2212739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2208659-2208782:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2198991-2199067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2192148-2192214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2142544-2142592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2140493-2140597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2131372-2131560:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2131010-2131068:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2128796-2128844:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2118069-2118165:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2116739-2117410:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2104684-2104749:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2081105-2081206:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2076491-2077335:-1:exon

cux1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein cut-like 1 isoform X5
translation: MHDIETENHKLRETLEEYNKEFAEVKNQEVTIKALKEKIKEYEQTLSSRAEILALEKEQKLQNDFSEKERKLQETQTSLASKFDEADHKVQALQSVLESTQTELFDLKTKYDEESTAKADEIEMIMTDLERANQRAEVVQREAESLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVELAAKDREVMQLVEDVQRLQANLTKLHETSTNQVSQLEQQLTAKNSTLKQLEEKLKDQSDYEEVKKELSILKSMEFVPSEGSGAQDTSKTLEVLLLEKNRSLQSENATLRITNSDLSGSAGRNGNDRLESLRPSTSPTSPPSKLLRSASEQASSANGTHQFSPTVLGQDFFSSSLTSSPIPLASAGKFALNSLLQRQLMQSFYSKAMQDAGSTTMLFPTGPYSTNSISSPSPIPPSSDVNGMIPSPSQSESAGSISEGEDLDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQREVPGQNIQRMLQEVKKRRYGSEGNITTRIRTPETGSDEAIKSILEQAKRELQVQKNVDSTQPPCTSSSGGSDEAIWSILEQARREMEAQKAGLEPTPKPAPVAHTDVTLHSSKVASSSSIFSSLTVMKKPSIMDSSTIATQTSHGLKKETVHDSCASEHHGIAETPHNMLKQVKNELGRGSTWRDQWWNTVCPDRRNSTFAEDGRAEENSSGRERFNNPGRHVDGNPLQGATSSDLWKDWQNAESPYSQASDLGTVVASSSVTPQSSPLPSSPLIPISKPHKPSVPPLTPEQYEIYMYQEVDTAELTRQVKEKLAKNGICQRIFGEKVNYFLKESCF
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(2076491..2077335,2081105..2081206,2104684..2104749,2116739..2117410,2118069..2118165,2128796..2128844,2131010..2131068,2131372..2131560,2140493..2140597,2142544..2142592,2192148..2192214,2198991..2199067,2208659..2208782,2212602..2212686))
location: region:2076491-2212686:-1
so has part: feature:2212602-2212686:-1:exon
so has part: feature:2208659-2208782:-1:exon
so has part: feature:2198991-2199067:-1:exon
so has part: feature:2192148-2192214:-1:exon
so has part: feature:2142544-2142592:-1:exon
so has part: feature:2140493-2140597:-1:exon
so has part: feature:2131372-2131560:-1:exon
so has part: feature:2131010-2131068:-1:exon
so has part: feature:2128796-2128844:-1:exon
so has part: feature:2118069-2118165:-1:exon
so has part: feature:2116739-2117410:-1:exon
so has part: feature:2104684-2104749:-1:exon
so has part: feature:2081105-2081206:-1:exon
so has part: feature:2076491-2077335:-1:exon

XP_032901460.1
type: Protein
SIO_000068: ncbiprotein

position:2212686:-1
position: 2212686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2212602-2212686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2208659-2208782:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2198991-2199067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2192148-2192214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2142544-2142592:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2140493-2140597:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2131372-2131560:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2131010-2131068:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2128796-2128844:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2118069-2118165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2116739-2117410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2104684-2104749:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2081105-2081206:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2076491-2077335:-1:exon

cux1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cux1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein cut-like 1 isoform X5
translation: MHDIETENHKLRETLEEYNKEFAEVKNQEVTIKALKEKIKEYEQTLSSRAEILALEKEQKLQNDFSEKERKLQETQTSLASKFDEADHKVQALQSVLESTQTELFDLKTKYDEESTAKADEIEMIMTDLERANQRAEVVQREAESLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVELAAKDREVMQLVEDVQRLQANLTKLHETSTNQVSQLEQQLTAKNSTLKQLEEKLKDQSDYEEVKKELSILKSMEFVPSEGSGAQDTSKTLEVLLLEKNRSLQSENATLRITNSDLSGSAGRNGNDRLESLRPSTSPTSPPSKLLRSASEQASSANGTHQFSPTVLGQDFFSSSLTSSPIPLASAGKFALNSLLQRQLMQSFYSKAMQDAGSTTMLFPTGPYSTNSISSPSPIPPSSDVNGMIPSPSQSESAGSISEGEDLDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQREVPGQNIQRMLQEVKKRRYGSEGNITTRIRTPETGSDEAIKSILEQAKRELQVQKNVDSTQPPCTSSSGGSDEAIWSILEQARREMEAQKAGLEPTPKPAPVAHTDVTLHSSKVASSSSIFSSLTVMKKPSIMDSSTIATQTSHGLKKETVHDSCASEHHGIAETPHNMLKQVKNELGRGSTWRDQWWNTVCPDRRNSTFAEDGRAEENSSGRERFNNPGRHVDGNPLQGATSSDLWKDWQNAESPYSQASDLGTVVASSSVTPQSSPLPSSPLIPISKPHKPSVPPLTPEQYEIYMYQEVDTAELTRQVKEKLAKNGICQRIFGEKVNYFLKESCF
SIO_010081: cux1
subclass of: SO_0000673
so part of: cux1
location: complement(join(2076491..2077335,2081105..2081206,2104684..2104749,2116739..2117410,2118069..2118165,2128796..2128844,2131010..2131068,2131372..2131560,2140493..2140597,2142544..2142592,2192148..2192214,2198991..2199067,2208659..2208782,2212602..2212686))
location: region:2076491-2212686:-1
so has part: feature:2212602-2212686:-1:exon
so has part: feature:2208659-2208782:-1:exon
so has part: feature:2198991-2199067:-1:exon
so has part: feature:2192148-2192214:-1:exon
so has part: feature:2142544-2142592:-1:exon
so has part: feature:2140493-2140597:-1:exon
so has part: feature:2131372-2131560:-1:exon
so has part: feature:2131010-2131068:-1:exon
so has part: feature:2128796-2128844:-1:exon
so has part: feature:2118069-2118165:-1:exon
so has part: feature:2116739-2117410:-1:exon
so has part: feature:2104684-2104749:-1:exon
so has part: feature:2081105-2081206:-1:exon
so has part: feature:2076491-2077335:-1:exon

XP_032901461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2212602-2212686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2208659-2208782:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2198991-2199067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2192148-2192214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2142544-2142592:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2140493-2140597:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2131372-2131560:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2131010-2131068:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2128796-2128844:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2118069-2118165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2116739-2117410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2104684-2104749:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2081105-2081206:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2076491-2077335:-1:exon

LOC116988723
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988723
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2149705..2150378
location: region:2149705-2150378:1
so has part: feature:2149705-2150378:1:exon
subclass of: SO_0000011

116988723
type: Gene
SIO_000068: ncbigene

position:2149705:1
position: 2149705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2150378:1
position: 2150378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2149705-2150378:1:exon

LOC116988723
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988723
product: uncharacterized LOC116988723
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004416052.1
SIO_010081: LOC116988723
subclass of: SO_0000673
so part of: LOC116988723
location: join(2149705..2149829,2150287..2150378)
location: region:2149705-2150378:1
so has part: feature:2149705-2149829:1:exon
so has part: feature:2150287-2150378:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2149705-2149829:1:exon

position:2149829:1
position: 2149829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2150287-2150378:1:exon

position:2150287:1
position: 2150287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989232
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989232
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(2403532..2403639)
location: region:2403532-2403639:-1
so has part: feature:2403532-2403639:-1:exon

116989232
type: Gene
SIO_000068: ncbigene

position:2403532:-1
position: 2403532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2403639:-1
position: 2403639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2403532-2403639:-1:exon

LOC116989232
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116989232
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00619
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116989232
subclass of: SO_0000673
so part of: LOC116989232
location: complement(2403532..2403639)
location: region:2403532-2403639:-1
so has part: feature:2403532-2403639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2403532-2403639:-1:exon

smyd4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: smyd4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2456034..2480372)
location: region:2456034-2480372:-1
so has part: feature:2456034-2480372:-1:exon
subclass of: SO_0000010

116988724
type: Gene
SIO_000068: ncbigene

position:2456034:-1
position: 2456034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2480372:-1
position: 2480372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2456034-2480372:-1:exon

smyd4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: smyd4
product: SET and MYND domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033045574.1
SIO_010081: smyd4
subclass of: SO_0000673
so part of: smyd4
location: complement(join(2456034..2456514,2456840..2456963,2457289..2457405,2462019..2462201,2463425..2463620,2464860..2464949,2468232..2468376,2480221..2480372))
location: region:2456034-2480372:-1
so has part: feature:2480221-2480372:-1:exon
so has part: feature:2468232-2468376:-1:exon
so has part: feature:2464860-2464949:-1:exon
so has part: feature:2463425-2463620:-1:exon
so has part: feature:2462019-2462201:-1:exon
so has part: feature:2457289-2457405:-1:exon
so has part: feature:2456840-2456963:-1:exon
so has part: feature:2456034-2456514:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2480221-2480372:-1:exon

position:2480221:-1
position: 2480221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2468232-2468376:-1:exon

position:2468232:-1
position: 2468232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2468376:-1
position: 2468376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2464860-2464949:-1:exon

position:2464860:-1
position: 2464860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2464949:-1
position: 2464949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2463425-2463620:-1:exon

position:2463425:-1
position: 2463425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2463620:-1
position: 2463620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2462019-2462201:-1:exon

position:2462019:-1
position: 2462019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2462201:-1
position: 2462201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2457289-2457405:-1:exon

position:2457289:-1
position: 2457289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2457405:-1
position: 2457405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2456840-2456963:-1:exon

position:2456840:-1
position: 2456840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2456963:-1
position: 2456963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2456034-2456514:-1:exon

position:2456514:-1
position: 2456514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

smyd4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: smyd4
product: SET and MYND domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033045573.1
SIO_010081: smyd4
subclass of: SO_0000673
so part of: smyd4
location: complement(join(2456034..2456514,2456840..2456963,2457289..2457405,2457784..2457910,2458439..2458599,2462019..2462201,2463425..2463620,2464860..2464949,2468232..2468376,2480221..2480372))
location: region:2456034-2480372:-1
so has part: feature:2480221-2480372:-1:exon
so has part: feature:2468232-2468376:-1:exon
so has part: feature:2464860-2464949:-1:exon
so has part: feature:2463425-2463620:-1:exon
so has part: feature:2462019-2462201:-1:exon
so has part: feature:2458439-2458599:-1:exon
so has part: feature:2457784-2457910:-1:exon
so has part: feature:2457289-2457405:-1:exon
so has part: feature:2456840-2456963:-1:exon
so has part: feature:2456034-2456514:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2480221-2480372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2468232-2468376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2464860-2464949:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2463425-2463620:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2462019-2462201:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2458439-2458599:-1:exon

position:2458439:-1
position: 2458439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2458599:-1
position: 2458599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2457784-2457910:-1:exon

position:2457784:-1
position: 2457784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2457910:-1
position: 2457910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2457289-2457405:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2456840-2456963:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2456034-2456514:-1:exon

smyd4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: smyd4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SET and MYND domain-containing protein 4 isoform X2
translation: MAGMQGPGHEWRRRCRLHWRHMPDLQRRRFTSNTRLGPLLRLARRWLRPADTAVLDELCASWRADKDRSTALDLKQRGNDSFKARDYLQALSLYTKGLRYMPADSPECALLYANRSAALYQLHRYQSPQQRFVCAASAAALCWALQHRRPQGDGVGTLGQGARLAALGVAVLRHMLQLQCNAQAITVLHDTGEGAGSVRDTREVCVGTALYCWASLLNHSCQPNTTASFQGTRITLRATEPIPAGEQVLHCYDTALAQLQQCQADAQSLLPAQHPLHGEIDDSLARVYATHGEWGAAAQHLQRSVHAVELQYGTGSVELAQQLLKLAQVLFNSRSVCEAESVIDRAIPLLTTHYGADHDTVAELRAMNSCLRSLPGRR
SIO_010081: smyd4
subclass of: SO_0000673
so part of: smyd4
location: complement(join(2456376..2456514,2456840..2456963,2457289..2457405,2462019..2462201,2463425..2463620,2464860..2464949,2468232..2468376,2480221..2480363))
location: region:2456376-2480363:-1
so has part: feature:2480221-2480363:-1:exon
so has part: feature:2468232-2468376:-1:exon
so has part: feature:2464860-2464949:-1:exon
so has part: feature:2463425-2463620:-1:exon
so has part: feature:2462019-2462201:-1:exon
so has part: feature:2457289-2457405:-1:exon
so has part: feature:2456840-2456963:-1:exon
so has part: feature:2456376-2456514:-1:exon

XP_032901465.1
type: Protein
SIO_000068: ncbiprotein

position:2456376:-1
position: 2456376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2480363:-1
position: 2480363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2480221-2480363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2468232-2468376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2464860-2464949:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2463425-2463620:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2462019-2462201:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2457289-2457405:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2456840-2456963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2456376-2456514:-1:exon

smyd4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: smyd4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SET and MYND domain-containing protein 4 isoform X1
translation: MAGMQGPGHEWRRRCRLHWRHMPDLQRRRFTSNTRLGPLLRLARRWLRPADTAVLDELCASWRADKDRSTALDLKQRGNDSFKARDYLQALSLYTKGLRYMPADSPECALLYANRSAALYQLHRYQSPQQRFVCAASAAALCWALQHRRPQGDGVGTLGQGARLAALGVAVLRHMLQLQCNAQAITVLHDTGEGAGSVRDTREVCVGTALYCWASLLNHSCQPNTTASFQGTRITLRATEPIPAGEQVLHCYGPHWSRQCVGDRRKSLQTQYYFWCECSACVREGGEGSPAPQAQFLCRPCGSALSLEEGGYRCVRCAQLVPPQSLQQQLQQLRLQMEGAGNMDSTHTDTALAQLQQCQADAQSLLPAQHPLHGEIDDSLARVYATHGEWGAAAQHLQRSVHAVELQYGTGSVELAQQLLKLAQVLFNSRSVCEAESVIDRAIPLLTTHYGADHDTVAELRAMNSCLRSLPGRR
SIO_010081: smyd4
subclass of: SO_0000673
so part of: smyd4
location: complement(join(2456376..2456514,2456840..2456963,2457289..2457405,2457784..2457910,2458439..2458599,2462019..2462201,2463425..2463620,2464860..2464949,2468232..2468376,2480221..2480363))
location: region:2456376-2480363:-1
so has part: feature:2480221-2480363:-1:exon
so has part: feature:2468232-2468376:-1:exon
so has part: feature:2464860-2464949:-1:exon
so has part: feature:2463425-2463620:-1:exon
so has part: feature:2462019-2462201:-1:exon
so has part: feature:2458439-2458599:-1:exon
so has part: feature:2457784-2457910:-1:exon
so has part: feature:2457289-2457405:-1:exon
so has part: feature:2456840-2456963:-1:exon
so has part: feature:2456376-2456514:-1:exon

XP_032901464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2480221-2480363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2468232-2468376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2464860-2464949:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2463425-2463620:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2462019-2462201:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2458439-2458599:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2457784-2457910:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2457289-2457405:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2456840-2456963:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2456376-2456514:-1:exon

LOC116989133
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2482145..2501813)
location: region:2482145-2501813:-1
so has part: feature:2482145-2501813:-1:exon
subclass of: SO_0000010

116989133
type: Gene
SIO_000068: ncbigene

position:2482145:-1
position: 2482145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2501813:-1
position: 2501813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2482145-2501813:-1:exon

LOC116989133
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989133
product: active breakpoint cluster region-related protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033046358.1
SIO_010081: LOC116989133
subclass of: SO_0000673
so part of: LOC116989133
location: complement(join(2482145..2482841,2483150..2483291,2487231..2487336,2490601..2490735,2501753..2501813))
location: region:2482145-2501813:-1
so has part: feature:2501753-2501813:-1:exon
so has part: feature:2490601-2490735:-1:exon
so has part: feature:2487231-2487336:-1:exon
so has part: feature:2483150-2483291:-1:exon
so has part: feature:2482145-2482841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2501753-2501813:-1:exon

position:2501753:-1
position: 2501753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2490601-2490735:-1:exon

position:2490601:-1
position: 2490601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2490735:-1
position: 2490735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2487231-2487336:-1:exon

position:2487231:-1
position: 2487231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2487336:-1
position: 2487336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2483150-2483291:-1:exon

position:2483150:-1
position: 2483150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2483291:-1
position: 2483291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2482145-2482841:-1:exon

position:2482841:-1
position: 2482841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116989133
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: active breakpoint cluster region-related protein-like
translation: MDPVSHQPPPRLSWINTLYSNAKDVLLMLTDLDIHAIAGTLKLYFRQLPEPLLTDRLHPAFLQGVALSDPAARENCMLHLLRSLPEPNASTFLFLLQHLKRVAEREAVNKMSVHNLATVFGPTLLRPSEIQIPSATPSHAWSHEIMAQVQVLLYYLQHPPLTASELRRNSLTYPM
SIO_010081: LOC116989133
subclass of: SO_0000673
so part of: LOC116989133
location: complement(join(2482758..2482841,2483150..2483291,2487231..2487336,2490601..2490735,2501753..2501813))
location: region:2482758-2501813:-1
so has part: feature:2501753-2501813:-1:exon
so has part: feature:2490601-2490735:-1:exon
so has part: feature:2487231-2487336:-1:exon
so has part: feature:2483150-2483291:-1:exon
so has part: feature:2482758-2482841:-1:exon

XP_032902249.1
type: Protein
SIO_000068: ncbiprotein

position:2482758:-1
position: 2482758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2501753-2501813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2490601-2490735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2487231-2487336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2483150-2483291:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2482758-2482841:-1:exon

LOC116988725
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2517060..2519529)
location: region:2517060-2519529:-1
so has part: feature:2517060-2519529:-1:exon
subclass of: SO_0000010

116988725
type: Gene
SIO_000068: ncbigene

position:2517060:-1
position: 2517060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2519529:-1
position: 2519529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2517060-2519529:-1:exon

LOC116988725
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988725
product: translation initiation factor IF-2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033045575.1
SIO_010081: LOC116988725
subclass of: SO_0000673
so part of: LOC116988725
location: complement(join(2517060..2517124,2517349..2519528))
location: region:2517060-2519528:-1
so has part: feature:2517349-2519528:-1:exon
so has part: feature:2517060-2517124:-1:exon

position:2519528:-1
position: 2519528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2517349-2519528:-1:exon

position:2517349:-1
position: 2517349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2517060-2517124:-1:exon

position:2517124:-1
position: 2517124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988725
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988725
product: translation initiation factor IF-2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033045576.1
SIO_010081: LOC116988725
subclass of: SO_0000673
so part of: LOC116988725
location: complement(join(2517194..2518420,2518589..2519529))
location: region:2517194-2519529:-1
so has part: feature:2518589-2519529:-1:exon
so has part: feature:2517194-2518420:-1:exon

position:2517194:-1
position: 2517194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2518589-2519529:-1:exon

position:2518589:-1
position: 2518589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2517194-2518420:-1:exon

position:2518420:-1
position: 2518420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like isoform X2
translation: MWDPAEFEGHWRREFPDSEAPRMELRSLAEVEAELGRCRQQLRRRQDQLAQERFKVIYLETALGRGPGPGQSRPRPQPRPRPKPQPRPPGGEGGAGPSVPQQSFGANTPSIDPEIQSTGEGAQSIGPETRGIGAGAQGIGAGAQGTLQTQSIGANTPSIDPATQSTGEGAQTIGAGAQGTESATQGIGAEKESIESANSPSIGDGPPSTGDGPSSTGDRPASTGDRPTSTGDGPPSTGERPASTVDRPASTGDRPASTGDGPPSTGDRPASTGDGPPSTGDRPPSMVPGSQGVGAGERGAAAAGRVVTGPGILRLEPGREDERDREGEAQSPQPAARSPARPVVFPRFRPLTKHRGKDGGSPGLRRRQQVTPSVRRVRETSPSDGSDREYSSDRDSTGESCRGGSVCVTGVQYPWAGSVCVTGVQYPWAGSVCVTGVQYPWAGSVCVTGVQYPWAGSVYVTGVQYPWAGSV
SIO_010081: LOC116988725
subclass of: SO_0000673
so part of: LOC116988725
location: complement(join(2517608..2518420,2518589..2519191))
location: region:2517608-2519191:-1
so has part: feature:2518589-2519191:-1:exon
so has part: feature:2517608-2518420:-1:exon

XP_032901467.1
type: Protein
SIO_000068: ncbiprotein

position:2517608:-1
position: 2517608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2519191:-1
position: 2519191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2518589-2519191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2517608-2518420:-1:exon

LOC116988725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like isoform X1
translation: MWDPAEFEGHWRREFPDSEAPRMELRSLAEVEAELGRCRQQLRRRQDQLAQERFKVIYLETALGRGPGPGQSRPRPQPRPRPKPQPRPPGGEGGAGPSVPQQSFGANTPSIDPEIQSTGEGAQSIGPETRGIGAGAQGIGAGAQGTLQTQSIGANTPSIDPATQSTGEGAQTIGAGAQGTESATQGIGAEKESIESANSPSIDRDTPSIGDEAPSTGDGPASTGDGPASTGDGPPSTGGRPASTGDGPASTGDGPASIGDGPPSTGDGPSSTGDRPASTGDRPTSTGDGPPSTGERPASTVDRPASTGDRPASTGDGPPSTGDRPASTGDGPPSTGDRPPSMVPGSQGVGAGERGAAAAGRVVTGPGILRLEPGREDERDREGEAQSPQPAARSPARPVVFPRFRPLTKHRGKDGGSPGLRRRQQVTPSVRRVRETSPSDGSDREYSSDRDSTGESCRGGSVCVTGVQYPWAGSVCVTGVQYPWAGSVCVTGVQYPWAGSVCVTGVQYPWAGSVYVTGVQYPWAGSV
SIO_010081: LOC116988725
subclass of: SO_0000673
so part of: LOC116988725
location: complement(2517608..2519191)
location: region:2517608-2519191:-1
so has part: feature:2517608-2519191:-1:exon

XP_032901466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2517608-2519191:-1:exon

timm22
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: timm22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2528352..2535136)
location: region:2528352-2535136:-1
so has part: feature:2528352-2535136:-1:exon
subclass of: SO_0000010

116988726
type: Gene
SIO_000068: ncbigene

position:2528352:-1
position: 2528352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2535136:-1
position: 2535136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2528352-2535136:-1:exon

timm22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: timm22
product: translocase of inner mitochondrial membrane 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033045577.1
SIO_010081: timm22
subclass of: SO_0000673
so part of: timm22
location: complement(join(2528352..2528639,2528851..2528923,2530978..2531174,2534844..2535136))
location: region:2528352-2535136:-1
so has part: feature:2534844-2535136:-1:exon
so has part: feature:2530978-2531174:-1:exon
so has part: feature:2528851-2528923:-1:exon
so has part: feature:2528352-2528639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2534844-2535136:-1:exon

position:2534844:-1
position: 2534844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2530978-2531174:-1:exon

position:2530978:-1
position: 2530978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2531174:-1
position: 2531174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2528851-2528923:-1:exon

position:2528851:-1
position: 2528851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2528923:-1
position: 2528923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2528352-2528639:-1:exon

position:2528639:-1
position: 2528639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

timm22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: timm22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit Tim22
translation: MAAPQAGGPALSALPGPAGGAAGVAGVGDAGDGALIYSQLLQQLVGERRQPRPLSPAALGGFPAPGKSEEQKMVERAMESCGFKATLACVGGLVLGGAFGIFTAGIDTNVGFDPKDPLKTPTAREVLKDMGQRGMSYAKNFAIVGAMFSCTECIIESYRGKSDWKNSVLSGCVTGGAIGFRAGLKAGTLGCAGFAAFSAVIDYYLR
SIO_010081: timm22
subclass of: SO_0000673
so part of: timm22
location: complement(join(2528563..2528639,2528851..2528923,2530978..2531174,2534844..2535117))
location: region:2528563-2535117:-1
so has part: feature:2534844-2535117:-1:exon
so has part: feature:2530978-2531174:-1:exon
so has part: feature:2528851-2528923:-1:exon
so has part: feature:2528563-2528639:-1:exon

XP_032901468.1
type: Protein
SIO_000068: ncbiprotein

position:2528563:-1
position: 2528563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2535117:-1
position: 2535117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2534844-2535117:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2530978-2531174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2528851-2528923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2528563-2528639:-1:exon

LOC116989203
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989203
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2538842..2546184
location: region:2538842-2546184:1
so has part: feature:2538842-2546184:1:exon
subclass of: SO_0000011

116989203
type: Gene
SIO_000068: ncbigene

position:2538842:1
position: 2538842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2546184:1
position: 2546184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2538842-2546184:1:exon

LOC116989203
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116989203
product: uncharacterized LOC116989203
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416170.1
SIO_010081: LOC116989203
subclass of: SO_0000673
so part of: LOC116989203
location: join(2538842..2539001,2545993..2546184)
location: region:2538842-2546184:1
so has part: feature:2538842-2539001:1:exon
so has part: feature:2545993-2546184:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2538842-2539001:1:exon

position:2539001:1
position: 2539001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2545993-2546184:1:exon

position:2545993:1
position: 2545993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989134
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2564022..2569450
location: region:2564022-2569450:1
so has part: feature:2564022-2569450:1:exon
subclass of: SO_0000010

116989134
type: Gene
SIO_000068: ncbigene

position:2564022:1
position: 2564022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2569450:1
position: 2569450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2564022-2569450:1:exon

LOC116989134
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116989134
product: vegetative cell wall protein gp1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033046360.1
SIO_010081: LOC116989134
subclass of: SO_0000673
so part of: LOC116989134
location: join(2564022..2564068,2567040..2567192,2567987..2568089,2568514..2569287,2569440..2569450)
location: region:2564022-2569450:1
so has part: feature:2564022-2564068:1:exon
so has part: feature:2567040-2567192:1:exon
so has part: feature:2567987-2568089:1:exon
so has part: feature:2568514-2569287:1:exon
so has part: feature:2569440-2569450:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2564022-2564068:1:exon

position:2564068:1
position: 2564068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2567040-2567192:1:exon

position:2567040:1
position: 2567040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2567192:1
position: 2567192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2567987-2568089:1:exon

position:2567987:1
position: 2567987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2568089:1
position: 2568089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2568514-2569287:1:exon

position:2568514:1
position: 2568514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2569287:1
position: 2569287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2569440-2569450:1:exon

position:2569440:1
position: 2569440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116989134
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116989134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vegetative cell wall protein gp1-like
translation: MKRTVGTLTKPSGRGTPAAPSAIKPSPAARSLRRPTQLRETGSQAGPEVTPPSTARSRGLGTVTPLSGTKAKGPGMLSGPRAAPARVSGRREGVGCGQAAVRVSSLPVRGLAGQRLAAPHTPLGQSRRMAAPPARGRGLGPGSPTDRGHPNPRAIPHPITSAPTPSRPRPVTDPSPLTPDPPPSDPRPLTSDPQPVTSDPLPSDPRLLTSDPQPVTSDPYPRTSDPVPFAVAPPSDPCPVTTDTPPSEPCSPSSDALSSDLTPSDPLHSDLPPFTLPPSDLLPSDLPPTDLMPFDLPTWCPASAGELGPVCGEQSHGPLGSGCYTEGQGETEGRG
SIO_010081: LOC116989134
subclass of: SO_0000673
so part of: LOC116989134
location: join(2567073..2567192,2567987..2568089,2568514..2569287,2569440..2569450)
location: region:2567073-2569450:1
so has part: feature:2567073-2567192:1:exon
so has part: feature:2567987-2568089:1:exon
so has part: feature:2568514-2569287:1:exon
so has part: feature:2569440-2569450:1:exon

XP_032902251.1
type: Protein
SIO_000068: ncbiprotein

position:2567073:1
position: 2567073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2567073-2567192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2567987-2568089:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2568514-2569287:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2569440-2569450:1:exon

LOC116988727
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2569642..2581988
location: region:2569642-2581988:1
so has part: feature:2569642-2581988:1:exon
subclass of: SO_0000010

116988727
type: Gene
SIO_000068: ncbigene

position:2569642:1
position: 2569642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581988:1
position: 2581988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2569642-2581988:1:exon

LOC116988727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988727
product: cytospin-B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033045579.1
SIO_010081: LOC116988727
subclass of: SO_0000673
so part of: LOC116988727
location: join(2569642..2569706,2571016..2571160,2571323..2571396,2580516..2580691,2581876..2581988)
location: region:2569642-2581988:1
so has part: feature:2569642-2569706:1:exon
so has part: feature:2571016-2571160:1:exon
so has part: feature:2571323-2571396:1:exon
so has part: feature:2580516-2580691:1:exon
so has part: feature:2581876-2581988:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2569642-2569706:1:exon

position:2569706:1
position: 2569706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2571016-2571160:1:exon

position:2571016:1
position: 2571016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2571160:1
position: 2571160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2571323-2571396:1:exon

position:2571323:1
position: 2571323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2571396:1
position: 2571396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2580516-2580691:1:exon

position:2580516:1
position: 2580516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2580691:1
position: 2580691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2581876-2581988:1:exon

position:2581876:1
position: 2581876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988727
product: cytospin-B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033045578.1
SIO_010081: LOC116988727
subclass of: SO_0000673
so part of: LOC116988727
location: join(2569642..2569706,2571016..2571160,2571323..2571396,2580516..2580811)
location: region:2569642-2580811:1
so has part: feature:2569642-2569706:1:exon
so has part: feature:2571016-2571160:1:exon
so has part: feature:2571323-2571396:1:exon
so has part: feature:2580516-2580811:1:exon

position:2580811:1
position: 2580811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2569642-2569706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2571016-2571160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2571323-2571396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2580516-2580811:1:exon

LOC116988727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytospin-B-like isoform X2
translation: MASPGPGSETTRDGCSKEDACVGGACGPVQWELQEMQETILELQDEVQQCRAVQLHSDRTIQQLENKVLCLEREKLELEKQLKTFNRKMREAADEWQRFQADLQTAVVVAEGMKAESQQRVVQLGRELEEERTTSQQLQRELDALHSLR
SIO_010081: LOC116988727
subclass of: SO_0000673
so part of: LOC116988727
location: join(2569656..2569706,2571016..2571160,2571323..2571396,2580516..2580691,2581876..2581879)
location: region:2569656-2581879:1
so has part: feature:2569656-2569706:1:exon
so has part: feature:2571016-2571160:1:exon
so has part: feature:2571323-2571396:1:exon
so has part: feature:2580516-2580691:1:exon
so has part: feature:2581876-2581879:1:exon

XP_032901470.1
type: Protein
SIO_000068: ncbiprotein

position:2569656:1
position: 2569656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581879:1
position: 2581879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2569656-2569706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2571016-2571160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2571323-2571396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2580516-2580691:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2581876-2581879:1:exon

LOC116988727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytospin-B-like isoform X1
translation: MASPGPGSETTRDGCSKEDACVGGACGPVQWELQEMQETILELQDEVQQCRAVQLHSDRTIQQLENKVLCLEREKLELEKQLKTFNRKMREAADEWQRFQADLQTAVVVAEGMKAESQQRVVQLGRELEEERTTSQQLQRELDALHSLRWVSRRRR
SIO_010081: LOC116988727
subclass of: SO_0000673
so part of: LOC116988727
location: join(2569656..2569706,2571016..2571160,2571323..2571396,2580516..2580716)
location: region:2569656-2580716:1
so has part: feature:2569656-2569706:1:exon
so has part: feature:2571016-2571160:1:exon
so has part: feature:2571323-2571396:1:exon
so has part: feature:2580516-2580716:1:exon

XP_032901469.1
type: Protein
SIO_000068: ncbiprotein

position:2580716:1
position: 2580716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2569656-2569706:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2571016-2571160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2571323-2571396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2580516-2580716:1:exon

adora2b
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: adora2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2621287..2628434
location: region:2621287-2628434:1
so has part: feature:2621287-2628434:1:exon
subclass of: SO_0000010

116988729
type: Gene
SIO_000068: ncbigene

position:2621287:1
position: 2621287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2628434:1
position: 2628434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2621287-2628434:1:exon

adora2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: adora2b
product: adenosine A2b receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033045580.1
SIO_010081: adora2b
subclass of: SO_0000673
so part of: adora2b
location: join(2621287..2621646,2627559..2628434)
location: region:2621287-2628434:1
so has part: feature:2621287-2621646:1:exon
so has part: feature:2627559-2628434:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2621287-2621646:1:exon

position:2621646:1
position: 2621646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2627559-2628434:1:exon

position:2627559:1
position: 2627559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

adora2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: adora2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenosine receptor A2b
translation: MGVLLSPADWLYVGLELAMAVLAVLGNVLVCWAVATNSSLRTGTNYFLVSLAVADVAVGAFAIPFAITISLALPIPSHPCRFLACFVLVLTQSSIFSLLGVAIDRYLAVSIHLRYSGLITGRRARLIIAIFWILSFFIGLTPFLGWSQSQSPSKKADVVGCGNASAARGSHLHPAGSDSCPRNTTHECHFLNVVDMQYMIYFNFLGCVLTPLLLMLVIYVKIFTVARRQLQKIELSSVGSDSSRTLLQNQVRVAKSLSVIVGFFAFCWLPLHTINCVYYFHPRLFHDMGSEMIDAAIILSHANSVGNPIIYAYKIREFRNTFRKIISQQILRREGSSYENDTFYSSSPQTLKAQSC
SIO_010081: adora2b
subclass of: SO_0000673
so part of: adora2b
location: join(2621306..2621646,2627559..2628288)
location: region:2621306-2628288:1
so has part: feature:2621306-2621646:1:exon
so has part: feature:2627559-2628288:1:exon

XP_032901471.1
type: Protein
SIO_000068: ncbiprotein

position:2621306:1
position: 2621306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2628288:1
position: 2628288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2621306-2621646:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2627559-2628288:1:exon

zswim7
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: zswim7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2662544..2685116)
location: region:2662544-2685116:-1
so has part: feature:2662544-2685116:-1:exon
subclass of: SO_0000010

116988731
type: Gene
SIO_000068: ncbigene

position:2662544:-1
position: 2662544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2685116:-1
position: 2685116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2662544-2685116:-1:exon

zswim7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: zswim7
product: zinc finger SWIM-type containing 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_033045586.1
SIO_010081: zswim7
subclass of: SO_0000673
so part of: zswim7
location: complement(join(2662544..2663514,2667746..2667850,2670941..2671043,2672791..2672812,2681057..2681155,2684851..2685116))
location: region:2662544-2685116:-1
so has part: feature:2684851-2685116:-1:exon
so has part: feature:2681057-2681155:-1:exon
so has part: feature:2672791-2672812:-1:exon
so has part: feature:2670941-2671043:-1:exon
so has part: feature:2667746-2667850:-1:exon
so has part: feature:2662544-2663514:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2684851-2685116:-1:exon

position:2684851:-1
position: 2684851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2681057-2681155:-1:exon

position:2681057:-1
position: 2681057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2681155:-1
position: 2681155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2672791-2672812:-1:exon

position:2672791:-1
position: 2672791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2672812:-1
position: 2672812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2670941-2671043:-1:exon

position:2670941:-1
position: 2670941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2671043:-1
position: 2671043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2667746-2667850:-1:exon

position:2667746:-1
position: 2667746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2667850:-1
position: 2667850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2662544-2663514:-1:exon

position:2663514:-1
position: 2663514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

zswim7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: zswim7
product: zinc finger SWIM-type containing 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033045585.1
SIO_010081: zswim7
subclass of: SO_0000673
so part of: zswim7
location: complement(join(2662544..2663514,2667746..2667850,2670941..2671043,2672791..2672812,2681057..2681155,2684714..2684846))
location: region:2662544-2684846:-1
so has part: feature:2684714-2684846:-1:exon
so has part: feature:2681057-2681155:-1:exon
so has part: feature:2672791-2672812:-1:exon
so has part: feature:2670941-2671043:-1:exon
so has part: feature:2667746-2667850:-1:exon
so has part: feature:2662544-2663514:-1:exon

position:2684846:-1
position: 2684846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2684714-2684846:-1:exon

position:2684714:-1
position: 2684714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2681057-2681155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2672791-2672812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2670941-2671043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2667746-2667850:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2662544-2663514:-1:exon

zswim7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: zswim7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger SWIM domain-containing protein 7 isoform X2
translation: MYCPPPPPPVSAYEPEEKMALSLGILPVVMAELLNKVQQVHQQSSQLTDELLLMLKFVFGPPILQALELVDQRSVTFVDSPSGRSLYQVIGSSGRVYRCFSSCLYCSCAAFMYSVLRRNDHILCKHLLAVYLCQAMGTLRQLRVSNQQLTDLLQAKDEELESTE
SIO_010081: zswim7
subclass of: SO_0000673
so part of: zswim7
location: complement(join(2663389..2663514,2667746..2667850,2670941..2671043,2672791..2672812,2681057..2681155,2684851..2684890))
location: region:2663389-2684890:-1
so has part: feature:2684851-2684890:-1:exon
so has part: feature:2681057-2681155:-1:exon
so has part: feature:2672791-2672812:-1:exon
so has part: feature:2670941-2671043:-1:exon
so has part: feature:2667746-2667850:-1:exon
so has part: feature:2663389-2663514:-1:exon

XP_032901477.1
type: Protein
SIO_000068: ncbiprotein

position:2663389:-1
position: 2663389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2684890:-1
position: 2684890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2684851-2684890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2681057-2681155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2672791-2672812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2670941-2671043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2667746-2667850:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2663389-2663514:-1:exon

zswim7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: zswim7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger SWIM domain-containing protein 7 isoform X1
translation: MLPAAASPGRTLRPCRWTRAQHGWRRRRRVTEPEEKMALSLGILPVVMAELLNKVQQVHQQSSQLTDELLLMLKFVFGPPILQALELVDQRSVTFVDSPSGRSLYQVIGSSGRVYRCFSSCLYCSCAAFMYSVLRRNDHILCKHLLAVYLCQAMGTLRQLRVSNQQLTDLLQAKDEELESTE
SIO_010081: zswim7
subclass of: SO_0000673
so part of: zswim7
location: complement(join(2663389..2663514,2667746..2667850,2670941..2671043,2672791..2672812,2681057..2681155,2684714..2684807))
location: region:2663389-2684807:-1
so has part: feature:2684714-2684807:-1:exon
so has part: feature:2681057-2681155:-1:exon
so has part: feature:2672791-2672812:-1:exon
so has part: feature:2670941-2671043:-1:exon
so has part: feature:2667746-2667850:-1:exon
so has part: feature:2663389-2663514:-1:exon

XP_032901476.1
type: Protein
SIO_000068: ncbiprotein

position:2684807:-1
position: 2684807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2684714-2684807:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2681057-2681155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2672791-2672812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2670941-2671043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2667746-2667850:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2663389-2663514:-1:exon

ncor1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ncor1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2685224..2865839)
location: region:2685224-2865839:-1
so has part: feature:2685224-2865839:-1:exon
subclass of: SO_0000010

116988730
type: Gene
SIO_000068: ncbigene

position:2685224:-1
position: 2685224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2865839:-1
position: 2865839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2685224-2865839:-1:exon

ncor1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ncor1
product: nuclear receptor corepressor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033045584.1
SIO_010081: ncor1
subclass of: SO_0000673
so part of: ncor1
location: complement(join(2685224..2686867,2688786..2689007,2697589..2697609,2699380..2699433,2705276..2705418,2713443..2713517,2716519..2716668,2717543..2717766,2718263..2718380,2718423..2718492,2723944..2724268,2724323..2724527,2725439..2725576,2726254..2726419,2726883..2727023,2729821..2729976,2730061..2730261,2732046..2732264,2738091..2738439,2740024..2740265,2740899..2740979,2743919..2744062,2747035..2747206,2748587..2748687,2751810..2751914,2754022..2754142,2755040..2755078,2756654..2756826,2758495..2758662,2761341..2761527,2762169..2762301,2766123..2766633,2769492..2769624,2772265..2772407,2772725..2772787,2778605..2778792,2781336..2781512,2785564..2785694,2789702..2789803,2794442..2794496,2795251..2795429,2796767..2796872,2802960..2803132,2804833..2804899,2810751..2810803,2814199..2814255,2817765..2817878,2838402..2838581,2846150..2846339,2849874..2849995,2852352..2852532,2865610..2865839))
location: region:2685224-2865839:-1
so has part: feature:2865610-2865839:-1:exon
so has part: feature:2852352-2852532:-1:exon
so has part: feature:2849874-2849995:-1:exon
so has part: feature:2846150-2846339:-1:exon
so has part: feature:2838402-2838581:-1:exon
so has part: feature:2817765-2817878:-1:exon
so has part: feature:2814199-2814255:-1:exon
so has part: feature:2810751-2810803:-1:exon
so has part: feature:2804833-2804899:-1:exon
so has part: feature:2802960-2803132:-1:exon
so has part: feature:2796767-2796872:-1:exon
so has part: feature:2795251-2795429:-1:exon
so has part: feature:2794442-2794496:-1:exon
so has part: feature:2789702-2789803:-1:exon
so has part: feature:2785564-2785694:-1:exon
so has part: feature:2781336-2781512:-1:exon
so has part: feature:2778605-2778792:-1:exon
so has part: feature:2772725-2772787:-1:exon
so has part: feature:2772265-2772407:-1:exon
so has part: feature:2769492-2769624:-1:exon
so has part: feature:2766123-2766633:-1:exon
so has part: feature:2762169-2762301:-1:exon
so has part: feature:2761341-2761527:-1:exon
so has part: feature:2758495-2758662:-1:exon
so has part: feature:2756654-2756826:-1:exon
so has part: feature:2755040-2755078:-1:exon
so has part: feature:2754022-2754142:-1:exon
so has part: feature:2751810-2751914:-1:exon
so has part: feature:2748587-2748687:-1:exon
so has part: feature:2747035-2747206:-1:exon
so has part: feature:2743919-2744062:-1:exon
so has part: feature:2740899-2740979:-1:exon
so has part: feature:2740024-2740265:-1:exon
so has part: feature:2738091-2738439:-1:exon
so has part: feature:2732046-2732264:-1:exon
so has part: feature:2730061-2730261:-1:exon
so has part: feature:2729821-2729976:-1:exon
so has part: feature:2726883-2727023:-1:exon
so has part: feature:2726254-2726419:-1:exon
so has part: feature:2725439-2725576:-1:exon
so has part: feature:2724323-2724527:-1:exon
so has part: feature:2723944-2724268:-1:exon
so has part: feature:2718423-2718492:-1:exon
so has part: feature:2718263-2718380:-1:exon
so has part: feature:2717543-2717766:-1:exon
so has part: feature:2716519-2716668:-1:exon
so has part: feature:2713443-2713517:-1:exon
so has part: feature:2705276-2705418:-1:exon
so has part: feature:2699380-2699433:-1:exon
so has part: feature:2697589-2697609:-1:exon
so has part: feature:2688786-2689007:-1:exon
so has part: feature:2685224-2686867:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2865610-2865839:-1:exon

position:2865610:-1
position: 2865610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2852352-2852532:-1:exon

position:2852352:-1
position: 2852352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2852532:-1
position: 2852532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2849874-2849995:-1:exon

position:2849874:-1
position: 2849874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2849995:-1
position: 2849995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2846150-2846339:-1:exon

position:2846150:-1
position: 2846150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2846339:-1
position: 2846339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2838402-2838581:-1:exon

position:2838402:-1
position: 2838402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2838581:-1
position: 2838581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2817765-2817878:-1:exon

position:2817765:-1
position: 2817765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2817878:-1
position: 2817878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2814199-2814255:-1:exon

position:2814199:-1
position: 2814199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2814255:-1
position: 2814255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2810751-2810803:-1:exon

position:2810751:-1
position: 2810751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2810803:-1
position: 2810803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2804833-2804899:-1:exon

position:2804833:-1
position: 2804833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2804899:-1
position: 2804899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2802960-2803132:-1:exon

position:2802960:-1
position: 2802960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2803132:-1
position: 2803132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2796767-2796872:-1:exon

position:2796767:-1
position: 2796767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2796872:-1
position: 2796872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2795251-2795429:-1:exon

position:2795251:-1
position: 2795251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2795429:-1
position: 2795429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2794442-2794496:-1:exon

position:2794442:-1
position: 2794442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2794496:-1
position: 2794496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2789702-2789803:-1:exon

position:2789702:-1
position: 2789702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2789803:-1
position: 2789803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2785564-2785694:-1:exon

position:2785564:-1
position: 2785564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2785694:-1
position: 2785694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2781336-2781512:-1:exon

position:2781336:-1
position: 2781336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2781512:-1
position: 2781512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2778605-2778792:-1:exon

position:2778605:-1
position: 2778605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2778792:-1
position: 2778792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2772725-2772787:-1:exon

position:2772725:-1
position: 2772725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2772787:-1
position: 2772787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2772265-2772407:-1:exon

position:2772265:-1
position: 2772265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2772407:-1
position: 2772407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2769492-2769624:-1:exon

position:2769492:-1
position: 2769492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2769624:-1
position: 2769624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2766123-2766633:-1:exon

position:2766123:-1
position: 2766123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2766633:-1
position: 2766633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2762169-2762301:-1:exon

position:2762169:-1
position: 2762169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2762301:-1
position: 2762301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2761341-2761527:-1:exon

position:2761341:-1
position: 2761341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2761527:-1
position: 2761527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2758495-2758662:-1:exon

position:2758495:-1
position: 2758495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2758662:-1
position: 2758662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2756654-2756826:-1:exon

position:2756654:-1
position: 2756654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2756826:-1
position: 2756826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2755040-2755078:-1:exon

position:2755040:-1
position: 2755040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2755078:-1
position: 2755078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2754022-2754142:-1:exon

position:2754022:-1
position: 2754022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2754142:-1
position: 2754142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2751810-2751914:-1:exon

position:2751810:-1
position: 2751810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2751914:-1
position: 2751914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2748587-2748687:-1:exon

position:2748587:-1
position: 2748587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2748687:-1
position: 2748687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2747035-2747206:-1:exon

position:2747035:-1
position: 2747035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2747206:-1
position: 2747206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2743919-2744062:-1:exon

position:2743919:-1
position: 2743919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2744062:-1
position: 2744062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2740899-2740979:-1:exon

position:2740899:-1
position: 2740899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2740979:-1
position: 2740979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2740024-2740265:-1:exon

position:2740024:-1
position: 2740024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2740265:-1
position: 2740265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2738091-2738439:-1:exon

position:2738091:-1
position: 2738091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2738439:-1
position: 2738439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2732046-2732264:-1:exon

position:2732046:-1
position: 2732046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2732264:-1
position: 2732264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2730061-2730261:-1:exon

position:2730061:-1
position: 2730061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2730261:-1
position: 2730261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2729821-2729976:-1:exon

position:2729821:-1
position: 2729821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2729976:-1
position: 2729976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2726883-2727023:-1:exon

position:2726883:-1
position: 2726883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2727023:-1
position: 2727023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2726254-2726419:-1:exon

position:2726254:-1
position: 2726254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2726419:-1
position: 2726419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:2725439-2725576:-1:exon

position:2725439:-1
position: 2725439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2725576:-1
position: 2725576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:2724323-2724527:-1:exon

position:2724323:-1
position: 2724323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2724527:-1
position: 2724527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:2723944-2724268:-1:exon

position:2723944:-1
position: 2723944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2724268:-1
position: 2724268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:2718423-2718492:-1:exon

position:2718423:-1
position: 2718423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2718492:-1
position: 2718492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:2718263-2718380:-1:exon

position:2718263:-1
position: 2718263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2718380:-1
position: 2718380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:2717543-2717766:-1:exon

position:2717543:-1
position: 2717543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2717766:-1
position: 2717766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:2716519-2716668:-1:exon

position:2716519:-1
position: 2716519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2716668:-1
position: 2716668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:2713443-2713517:-1:exon

position:2713443:-1
position: 2713443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2713517:-1
position: 2713517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:2705276-2705418:-1:exon

position:2705276:-1
position: 2705276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2705418:-1
position: 2705418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:2699380-2699433:-1:exon

position:2699380:-1
position: 2699380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2699433:-1
position: 2699433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:2697589-2697609:-1:exon

position:2697589:-1
position: 2697589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2697609:-1
position: 2697609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:2688786-2689007:-1:exon

position:2688786:-1
position: 2688786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2689007:-1
position: 2689007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:2685224-2686867:-1:exon

position:2686867:-1
position: 2686867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ncor1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ncor1
product: nuclear receptor corepressor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033045581.1
SIO_010081: ncor1
subclass of: SO_0000673
so part of: ncor1
location: complement(join(2685224..2686867,2688786..2689007,2697589..2697609,2699380..2699433,2705276..2705418,2713443..2713517,2716519..2716668,2717543..2717766,2718263..2718380,2718423..2718492,2719702..2719833,2723944..2724268,2724323..2724527,2725439..2725576,2726254..2726419,2726883..2727023,2729821..2729976,2730061..2730261,2732046..2732264,2738091..2738439,2740024..2740265,2740899..2740979,2743919..2744062,2747035..2747206,2748587..2748687,2751810..2751914,2754022..2754142,2755040..2755078,2756654..2756826,2758495..2758662,2761341..2761527,2762169..2762301,2766123..2766633,2769492..2769624,2772265..2772407,2772725..2772787,2778605..2778792,2781336..2781512,2785564..2785694,2789702..2789803,2794442..2794496,2795251..2795429,2796767..2796872,2802960..2803132,2804833..2804899,2810751..2810803,2814199..2814255,2817765..2817878,2838402..2838581,2846150..2846339,2849874..2849995,2852352..2852532,2865610..2865838))
location: region:2685224-2865838:-1
so has part: feature:2865610-2865838:-1:exon
so has part: feature:2852352-2852532:-1:exon
so has part: feature:2849874-2849995:-1:exon
so has part: feature:2846150-2846339:-1:exon
so has part: feature:2838402-2838581:-1:exon
so has part: feature:2817765-2817878:-1:exon
so has part: feature:2814199-2814255:-1:exon
so has part: feature:2810751-2810803:-1:exon
so has part: feature:2804833-2804899:-1:exon
so has part: feature:2802960-2803132:-1:exon
so has part: feature:2796767-2796872:-1:exon
so has part: feature:2795251-2795429:-1:exon
so has part: feature:2794442-2794496:-1:exon
so has part: feature:2789702-2789803:-1:exon
so has part: feature:2785564-2785694:-1:exon
so has part: feature:2781336-2781512:-1:exon
so has part: feature:2778605-2778792:-1:exon
so has part: feature:2772725-2772787:-1:exon
so has part: feature:2772265-2772407:-1:exon
so has part: feature:2769492-2769624:-1:exon
so has part: feature:2766123-2766633:-1:exon
so has part: feature:2762169-2762301:-1:exon
so has part: feature:2761341-2761527:-1:exon
so has part: feature:2758495-2758662:-1:exon
so has part: feature:2756654-2756826:-1:exon
so has part: feature:2755040-2755078:-1:exon
so has part: feature:2754022-2754142:-1:exon
so has part: feature:2751810-2751914:-1:exon
so has part: feature:2748587-2748687:-1:exon
so has part: feature:2747035-2747206:-1:exon
so has part: feature:2743919-2744062:-1:exon
so has part: feature:2740899-2740979:-1:exon
so has part: feature:2740024-2740265:-1:exon
so has part: feature:2738091-2738439:-1:exon
so has part: feature:2732046-2732264:-1:exon
so has part: feature:2730061-2730261:-1:exon
so has part: feature:2729821-2729976:-1:exon
so has part: feature:2726883-2727023:-1:exon
so has part: feature:2726254-2726419:-1:exon
so has part: feature:2725439-2725576:-1:exon
so has part: feature:2724323-2724527:-1:exon
so has part: feature:2723944-2724268:-1:exon
so has part: feature:2719702-2719833:-1:exon
so has part: feature:2718423-2718492:-1:exon
so has part: feature:2718263-2718380:-1:exon
so has part: feature:2717543-2717766:-1:exon
so has part: feature:2716519-2716668:-1:exon
so has part: feature:2713443-2713517:-1:exon
so has part: feature:2705276-2705418:-1:exon
so has part: feature:2699380-2699433:-1:exon
so has part: feature:2697589-2697609:-1:exon
so has part: feature:2688786-2689007:-1:exon
so has part: feature:2685224-2686867:-1:exon

position:2865838:-1
position: 2865838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2865610-2865838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2852352-2852532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2849874-2849995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2846150-2846339:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2838402-2838581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2817765-2817878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2814199-2814255:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2810751-2810803:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2804833-2804899:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2802960-2803132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2796767-2796872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2795251-2795429:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2794442-2794496:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2789702-2789803:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2785564-2785694:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2781336-2781512:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2778605-2778792:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2772725-2772787:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2772265-2772407:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2769492-2769624:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2766123-2766633:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2762169-2762301:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2761341-2761527:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2758495-2758662:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2756654-2756826:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2755040-2755078:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2754022-2754142:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2751810-2751914:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2748587-2748687:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2747035-2747206:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2743919-2744062:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2740899-2740979:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2740024-2740265:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2738091-2738439:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2732046-2732264:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2730061-2730261:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2729821-2729976:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2726883-2727023:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2726254-2726419:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2725439-2725576:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2724323-2724527:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2723944-2724268:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2719702-2719833:-1:exon

position:2719702:-1
position: 2719702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2719833:-1
position: 2719833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:2718423-2718492:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2718263-2718380:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2717543-2717766:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2716519-2716668:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2713443-2713517:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2705276-2705418:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2699380-2699433:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2697589-2697609:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2688786-2689007:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2685224-2686867:-1:exon

ncor1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ncor1
product: nuclear receptor corepressor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033045583.1
SIO_010081: ncor1
subclass of: SO_0000673
so part of: ncor1
location: complement(join(2685224..2686867,2688786..2689007,2697589..2697609,2699380..2699433,2705276..2705418,2713443..2713517,2716519..2716668,2717543..2717766,2718263..2718386,2718423..2718492,2719702..2719833,2723944..2724247,2724308..2724527,2725439..2725576,2726254..2726419,2726883..2727023,2729821..2729976,2730061..2730261,2732046..2732264,2738091..2738439,2740024..2740265,2740899..2740979,2743919..2744062,2747035..2747206,2748587..2748687,2751810..2751914,2754022..2754142,2755040..2755078,2756654..2756826,2758495..2758662,2761341..2761527,2762169..2762301,2766123..2766633,2769492..2769624,2772265..2772407,2772725..2772787,2778605..2778792,2781336..2781512,2785564..2785694,2789702..2789803,2794442..2794496,2795251..2795429,2796767..2796872,2802960..2803132,2804833..2804899,2810751..2810803,2814199..2814255,2817765..2817878,2838402..2838581,2846150..2846339,2849874..2849995,2852352..2852532,2865610..2865838))
location: region:2685224-2865838:-1
so has part: feature:2865610-2865838:-1:exon
so has part: feature:2852352-2852532:-1:exon
so has part: feature:2849874-2849995:-1:exon
so has part: feature:2846150-2846339:-1:exon
so has part: feature:2838402-2838581:-1:exon
so has part: feature:2817765-2817878:-1:exon
so has part: feature:2814199-2814255:-1:exon
so has part: feature:2810751-2810803:-1:exon
so has part: feature:2804833-2804899:-1:exon
so has part: feature:2802960-2803132:-1:exon
so has part: feature:2796767-2796872:-1:exon
so has part: feature:2795251-2795429:-1:exon
so has part: feature:2794442-2794496:-1:exon
so has part: feature:2789702-2789803:-1:exon
so has part: feature:2785564-2785694:-1:exon
so has part: feature:2781336-2781512:-1:exon
so has part: feature:2778605-2778792:-1:exon
so has part: feature:2772725-2772787:-1:exon
so has part: feature:2772265-2772407:-1:exon
so has part: feature:2769492-2769624:-1:exon
so has part: feature:2766123-2766633:-1:exon
so has part: feature:2762169-2762301:-1:exon
so has part: feature:2761341-2761527:-1:exon
so has part: feature:2758495-2758662:-1:exon
so has part: feature:2756654-2756826:-1:exon
so has part: feature:2755040-2755078:-1:exon
so has part: feature:2754022-2754142:-1:exon
so has part: feature:2751810-2751914:-1:exon
so has part: feature:2748587-2748687:-1:exon
so has part: feature:2747035-2747206:-1:exon
so has part: feature:2743919-2744062:-1:exon
so has part: feature:2740899-2740979:-1:exon
so has part: feature:2740024-2740265:-1:exon
so has part: feature:2738091-2738439:-1:exon
so has part: feature:2732046-2732264:-1:exon
so has part: feature:2730061-2730261:-1:exon
so has part: feature:2729821-2729976:-1:exon
so has part: feature:2726883-2727023:-1:exon
so has part: feature:2726254-2726419:-1:exon
so has part: feature:2725439-2725576:-1:exon
so has part: feature:2724308-2724527:-1:exon
so has part: feature:2723944-2724247:-1:exon
so has part: feature:2719702-2719833:-1:exon
so has part: feature:2718423-2718492:-1:exon
so has part: feature:2718263-2718386:-1:exon
so has part: feature:2717543-2717766:-1:exon
so has part: feature:2716519-2716668:-1:exon
so has part: feature:2713443-2713517:-1:exon
so has part: feature:2705276-2705418:-1:exon
so has part: feature:2699380-2699433:-1:exon
so has part: feature:2697589-2697609:-1:exon
so has part: feature:2688786-2689007:-1:exon
so has part: feature:2685224-2686867:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2865610-2865838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2852352-2852532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2849874-2849995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2846150-2846339:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2838402-2838581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2817765-2817878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2814199-2814255:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2810751-2810803:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2804833-2804899:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2802960-2803132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2796767-2796872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2795251-2795429:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2794442-2794496:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2789702-2789803:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2785564-2785694:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2781336-2781512:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2778605-2778792:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2772725-2772787:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2772265-2772407:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2769492-2769624:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2766123-2766633:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2762169-2762301:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2761341-2761527:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2758495-2758662:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2756654-2756826:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2755040-2755078:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2754022-2754142:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2751810-2751914:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2748587-2748687:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2747035-2747206:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2743919-2744062:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2740899-2740979:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2740024-2740265:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2738091-2738439:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2732046-2732264:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2730061-2730261:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2729821-2729976:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2726883-2727023:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2726254-2726419:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2725439-2725576:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2724308-2724527:-1:exon

position:2724308:-1
position: 2724308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:2723944-2724247:-1:exon

position:2724247:-1
position: 2724247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:2719702-2719833:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2718423-2718492:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2718263-2718386:-1:exon

position:2718386:-1
position: 2718386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:2717543-2717766:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2716519-2716668:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2713443-2713517:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2705276-2705418:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2699380-2699433:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2697589-2697609:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2688786-2689007:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2685224-2686867:-1:exon

ncor1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ncor1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor corepressor 1 isoform X3
translation: MSSSGYPSGQGPFGADATRYPAHAIQYTFSSGRHQQEFAVPDYRSHLQDSQLLQQQQHQQLRRRPSLLSEFHPASDRPQERRSGYDQSYHSVAGQPDHDSLETKRPRLEQVPEPHFQRATVLPLVHPLPEGLRAPTEVKKESFSMKVDVPSSPSTNQQGGDEQDSSPSKLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEAKHRSIVQIIYDENRKKAEEAHKILEGLGPRVELPLYNQPSDTKIYHENIKTNQVMRKKLILFFKRRNHARKQREQKICQRYDQLMEVWEKKVDRIENNPRRKAKEGKTREYYEKQFPEIRKQREQQERFQSDNLSRVGQRGAGLPATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDVEQQRVKFLNLNGVMDDPMRVYKERQFINVWSEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYLTKKNENYKNLVRRNYGRRRGRNTQQISRPSQEEKEAEKEEEKVEKIEKEEKDEKKEEEKDEKEEPQRLKQHGKSPFDSICPCRCISESGSFASENETARTLEEQHLIFRLGSLQPNGTNIELSNFREAVKEKEKSDTAGEEPEEKEQSVLRGRKTANSQGRRKGRILRSMAKEAIAEEPPNPPPPPELAVAEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDMLLQQHKLRVQQMSRRSREDREVSQCESIASTVSVQEDEDNEVSNEEENAEDSEAAENSSDTESAPSPSPMLNKPSKENTEANRVMGEELNHSTQNIPDVPPASATPAAASPELHIKQEMNLGFEESMEEQRDSDAEAKPLFDPLVKTKSEPVDAYVKPEESVQVKVEVDAKDREFEKARQQEAMRPEILDLPQTGAQMEAQSDNDSSATCSADEVEDGESERQRMYPSESKPSLLKPLSSMLMASTMKPMVQMDIQQLQQRAAMIPSMMGTPYMPAGAPVSGLALLQRHIKAAHDCALQEEQARQHLDNERRNSASPNISSKGCPIPGREGKSYAFIPFHDNRRGMEQESQAAGARSASPYRLSPRESCKLSPQPEMSTLRYSVPPVLQPAPHQVMQTSEGGKIVITRPTRPSNIPSPPPLIPSTKPQLPCEKPSYIMGTSISQQYMDAAVCQSRLQIAPGVYLPPHSQVSYSQEAVKNAVGSISLGLPRQQEPVKPGSLQYIKQEELSPRSHNPQPEGLLSRAAYEANMVRGGQIATIQDTGMTRCSPISKVSAEPPSYRGSITQGTPGLSQQGIAADALLKGAINKLASEDLGSPEQSREEAMSKGHVIYESKSGHILSYDTAKNVREGTRSPRTGLELHGVKRSYDLMEAGMNRGLSMRDSPVPTPYEGLISRARESPHLPESKDRTVPSGSIMQGTPRASSDSFDEGIKYSKQIKRESSPLRTFEGSITKGKPYEGVTTIKEMGRSIHEIPRQECRKTPEMVQSNRPIVEGSISQGTPVKHESQSAIKHDVKSLITMTSKHPHPMHQLEKISEGVKVMERKYEEMKPSDQLRVRHSAVTSSGTSVLRSTMHEAAKSQLSPGLYEDPNARRTPVGYPGYITRGPPMVSRSQEVVTTSGKSCPDRKATMVSAQRENISVKSPVSVVDPSATLSPYESLHGRGNPEFRGHVPLPFDQTMAFHRALDPAYLFPRQLSPNPNYSNHYQLYAMENTRQTILNDYITSQQMQVITKPDGTRGMSPRETLGVPYAAGARVCSFAGIIDLAQMPHTILVPGGSSTPPMDRITYIPGNQAPYPGRYNHSPISPGHPAHISASAANAEREREKEREREREREQRERERMAVTTCDLSYLRAGPEQTSRPNSHGYVRSPSPSIRPQETILQQRPSIFQGANGKGVITSLDAATQPRIMFSQDMMVPHRSSSPDPILTSNAVCVDFARSPGVLWFPPTSQRLAGWQVPQGALSIAQGISASRFSTAADALAALVDAAASAPQ…
SIO_010081: ncor1
subclass of: SO_0000673
so part of: ncor1
location: complement(join(2686683..2686867,2688786..2689007,2697589..2697609,2699380..2699433,2705276..2705418,2713443..2713517,2716519..2716668,2717543..2717766,2718263..2718380,2718423..2718492,2723944..2724268,2724323..2724527,2725439..2725576,2726254..2726419,2726883..2727023,2729821..2729976,2730061..2730261,2732046..2732264,2738091..2738439,2740024..2740265,2740899..2740979,2743919..2744062,2747035..2747206,2748587..2748687,2751810..2751914,2754022..2754142,2755040..2755078,2756654..2756826,2758495..2758662,2761341..2761527,2762169..2762301,2766123..2766633,2769492..2769624,2772265..2772407,2772725..2772787,2778605..2778792,2781336..2781512,2785564..2785694,2789702..2789803,2794442..2794496,2795251..2795429,2796767..2796872,2802960..2803132,2804833..2804899,2810751..2810803,2814199..2814255,2817765..2817878,2838402..2838581,2846150..2846339,2849874..2849995,2852352..2852459))
location: region:2686683-2852459:-1
so has part: feature:2852352-2852459:-1:exon
so has part: feature:2849874-2849995:-1:exon
so has part: feature:2846150-2846339:-1:exon
so has part: feature:2838402-2838581:-1:exon
so has part: feature:2817765-2817878:-1:exon
so has part: feature:2814199-2814255:-1:exon
so has part: feature:2810751-2810803:-1:exon
so has part: feature:2804833-2804899:-1:exon
so has part: feature:2802960-2803132:-1:exon
so has part: feature:2796767-2796872:-1:exon
so has part: feature:2795251-2795429:-1:exon
so has part: feature:2794442-2794496:-1:exon
so has part: feature:2789702-2789803:-1:exon
so has part: feature:2785564-2785694:-1:exon
so has part: feature:2781336-2781512:-1:exon
so has part: feature:2778605-2778792:-1:exon
so has part: feature:2772725-2772787:-1:exon
so has part: feature:2772265-2772407:-1:exon
so has part: feature:2769492-2769624:-1:exon
so has part: feature:2766123-2766633:-1:exon
so has part: feature:2762169-2762301:-1:exon
so has part: feature:2761341-2761527:-1:exon
so has part: feature:2758495-2758662:-1:exon
so has part: feature:2756654-2756826:-1:exon
so has part: feature:2755040-2755078:-1:exon
so has part: feature:2754022-2754142:-1:exon
so has part: feature:2751810-2751914:-1:exon
so has part: feature:2748587-2748687:-1:exon
so has part: feature:2747035-2747206:-1:exon
so has part: feature:2743919-2744062:-1:exon
so has part: feature:2740899-2740979:-1:exon
so has part: feature:2740024-2740265:-1:exon
so has part: feature:2738091-2738439:-1:exon
so has part: feature:2732046-2732264:-1:exon
so has part: feature:2730061-2730261:-1:exon
so has part: feature:2729821-2729976:-1:exon
so has part: feature:2726883-2727023:-1:exon
so has part: feature:2726254-2726419:-1:exon
so has part: feature:2725439-2725576:-1:exon
so has part: feature:2724323-2724527:-1:exon
so has part: feature:2723944-2724268:-1:exon
so has part: feature:2718423-2718492:-1:exon
so has part: feature:2718263-2718380:-1:exon
so has part: feature:2717543-2717766:-1:exon
so has part: feature:2716519-2716668:-1:exon
so has part: feature:2713443-2713517:-1:exon
so has part: feature:2705276-2705418:-1:exon
so has part: feature:2699380-2699433:-1:exon
so has part: feature:2697589-2697609:-1:exon
so has part: feature:2688786-2689007:-1:exon
so has part: feature:2686683-2686867:-1:exon

XP_032901475.1
type: Protein
SIO_000068: ncbiprotein

position:2686683:-1
position: 2686683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2852459:-1
position: 2852459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2852352-2852459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2849874-2849995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2846150-2846339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2838402-2838581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2817765-2817878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2814199-2814255:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2810751-2810803:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2804833-2804899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2802960-2803132:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2796767-2796872:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2795251-2795429:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2794442-2794496:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2789702-2789803:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2785564-2785694:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2781336-2781512:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2778605-2778792:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2772725-2772787:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2772265-2772407:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2769492-2769624:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2766123-2766633:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2762169-2762301:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2761341-2761527:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2758495-2758662:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2756654-2756826:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2755040-2755078:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2754022-2754142:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2751810-2751914:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2748587-2748687:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2747035-2747206:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2743919-2744062:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2740899-2740979:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2740024-2740265:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2738091-2738439:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2732046-2732264:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2730061-2730261:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2729821-2729976:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2726883-2727023:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2726254-2726419:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2725439-2725576:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2724323-2724527:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2723944-2724268:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2718423-2718492:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2718263-2718380:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2717543-2717766:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2716519-2716668:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2713443-2713517:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2705276-2705418:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2699380-2699433:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2697589-2697609:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2688786-2689007:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2686683-2686867:-1:exon

ncor1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ncor1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor corepressor 1 isoform X1
translation: MSSSGYPSGQGPFGADATRYPAHAIQYTFSSGRHQQEFAVPDYRSHLQDSQLLQQQQHQQLRRRPSLLSEFHPASDRPQERRSGYDQSYHSVAGQPDHDSLETKRPRLEQVPEPHFQRATVLPLVHPLPEGLRAPTEVKKESFSMKVDVPSSPSTNQQGGDEQDSSPSKLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEAKHRSIVQIIYDENRKKAEEAHKILEGLGPRVELPLYNQPSDTKIYHENIKTNQVMRKKLILFFKRRNHARKQREQKICQRYDQLMEVWEKKVDRIENNPRRKAKEGKTREYYEKQFPEIRKQREQQERFQSDNLSRVGQRGAGLPATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDVEQQRVKFLNLNGVMDDPMRVYKERQFINVWSEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYLTKKNENYKNLVRRNYGRRRGRNTQQISRPSQEEKEAEKEEEKVEKIEKEEKDEKKEEEKDEKEEPQRLKQHGKSPFDSICPCRCISESGSFASENETARTLEEQHLIFRLGSLQPNGTNIELSNFREAVKEKEKSDTAGEEPEEKEQSVLRGRKTANSQGRRKGRILRSMAKEAIAEEPPNPPPPPELAVAEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDMLLQQHKLRVQQMSRRSREDREVSQCESIASTVSVQEDEDNEVSNEEENAEDSEAAENSSDTESAPSPSPMLNKPSKENTEANRVMGEELNHSTQNIPDVPPASATPAAASPELHIKQEMNLGFEESMEEQRDSDAEAKPLFDPLVKTKSEPVDAYVKPEESVQVKVEVDAKDREFEKARQQEAMRPEILDLPQTGAQMEAQSDNDSSATCSADEVEDGESERQRMYPSESKPSLLKPLSSMLMASTMKPMVQMDIQQLQQRAAMIPSMMGTPYMPAGAPVSGLALLQRHIKAAHDCALQEEQARQHLDNERRNSASPNISSKGCPIPGREGKSYAFIPFHDNRRGMEQESQAAGARSASPYRLSPRESCKLSPQPEMSTLRYSVPPVLQPAPHQVMQTSEGGKIVITRPTRPSNIPSPPPLIPSTKPQLPCEKPSYIMGTSISQQYMDAAVCQSRLQIAPGVYLPPHSQVSYSQEAVKNAVGSISLGLPRQQEPVKPGSLQYIKQEELSPRSHNPQPEGLLSRAAYEANMVRGGQIATIQDTGMTRCSPISKVSAEPPSYRGSITQGTPGLSQQGIAADALLKGAINKLASEDLGSPEQSREEAMSKGHVIYESKSGHILSYDTAKNVREGTRSPRTGLELHGVKRSYDLMEAGMNRGLSMRDSPVPTPYEGLISRARESPHLPESKDRTVPSGSIMQGTPRASSDSFDEGIKYSKQIKRESSPLRTFEGSITKGKPYEGVTTIKEMGRSIHEIPRQECRKTPEMVQSNRPIVEGSISQGTPVKHESQSAIKHDVKSLITMTSKHPHPMHQLEKISEGVKVMERKYEEMKPSDQLRVRHSAVTSSGTSVLRSTMHEAAKSQLSPGLYEDPNARRTPVGYPGYITRGPPMVSRSQEVVTTSGKSCPDRKATMVSAQRENISVKSPVSVVDPSATLSPYESLHGRGNPEFRGHVPLPFDQTMAFHRALDPAYLFPRQLSPNPNYSNHYQLYAMENTRQTILNDYITSQQMQVITKPDGTRGMSPRETLGVPYAAGARVCSFAGIIDLAQMPHTILVPGGSSTPPMDRITYIPGNQAPYPGRYNHSPISPGHPAHISASAANAEREREKEREREREREQRERERMAVTTCDLSYLRAGPEQTSRPNSHGYVRSPSPSIRPQETILQQRPSIFQGANGKGVITSLDAATQPRIMFSQDMMVPHRSSSPDPILTSNAVCVDFARSPGVLWFPPTSQRLAGWQVPQGALSIAQGISASRFSTAADALAALVDAAASAPQ…
SIO_010081: ncor1
subclass of: SO_0000673
so part of: ncor1
location: complement(join(2686683..2686867,2688786..2689007,2697589..2697609,2699380..2699433,2705276..2705418,2713443..2713517,2716519..2716668,2717543..2717766,2718263..2718380,2718423..2718492,2719702..2719833,2723944..2724268,2724323..2724527,2725439..2725576,2726254..2726419,2726883..2727023,2729821..2729976,2730061..2730261,2732046..2732264,2738091..2738439,2740024..2740265,2740899..2740979,2743919..2744062,2747035..2747206,2748587..2748687,2751810..2751914,2754022..2754142,2755040..2755078,2756654..2756826,2758495..2758662,2761341..2761527,2762169..2762301,2766123..2766633,2769492..2769624,2772265..2772407,2772725..2772787,2778605..2778792,2781336..2781512,2785564..2785694,2789702..2789803,2794442..2794496,2795251..2795429,2796767..2796872,2802960..2803132,2804833..2804899,2810751..2810803,2814199..2814255,2817765..2817878,2838402..2838581,2846150..2846339,2849874..2849995,2852352..2852459))
location: region:2686683-2852459:-1
so has part: feature:2852352-2852459:-1:exon
so has part: feature:2849874-2849995:-1:exon
so has part: feature:2846150-2846339:-1:exon
so has part: feature:2838402-2838581:-1:exon
so has part: feature:2817765-2817878:-1:exon
so has part: feature:2814199-2814255:-1:exon
so has part: feature:2810751-2810803:-1:exon
so has part: feature:2804833-2804899:-1:exon
so has part: feature:2802960-2803132:-1:exon
so has part: feature:2796767-2796872:-1:exon
so has part: feature:2795251-2795429:-1:exon
so has part: feature:2794442-2794496:-1:exon
so has part: feature:2789702-2789803:-1:exon
so has part: feature:2785564-2785694:-1:exon
so has part: feature:2781336-2781512:-1:exon
so has part: feature:2778605-2778792:-1:exon
so has part: feature:2772725-2772787:-1:exon
so has part: feature:2772265-2772407:-1:exon
so has part: feature:2769492-2769624:-1:exon
so has part: feature:2766123-2766633:-1:exon
so has part: feature:2762169-2762301:-1:exon
so has part: feature:2761341-2761527:-1:exon
so has part: feature:2758495-2758662:-1:exon
so has part: feature:2756654-2756826:-1:exon
so has part: feature:2755040-2755078:-1:exon
so has part: feature:2754022-2754142:-1:exon
so has part: feature:2751810-2751914:-1:exon
so has part: feature:2748587-2748687:-1:exon
so has part: feature:2747035-2747206:-1:exon
so has part: feature:2743919-2744062:-1:exon
so has part: feature:2740899-2740979:-1:exon
so has part: feature:2740024-2740265:-1:exon
so has part: feature:2738091-2738439:-1:exon
so has part: feature:2732046-2732264:-1:exon
so has part: feature:2730061-2730261:-1:exon
so has part: feature:2729821-2729976:-1:exon
so has part: feature:2726883-2727023:-1:exon
so has part: feature:2726254-2726419:-1:exon
so has part: feature:2725439-2725576:-1:exon
so has part: feature:2724323-2724527:-1:exon
so has part: feature:2723944-2724268:-1:exon
so has part: feature:2719702-2719833:-1:exon
so has part: feature:2718423-2718492:-1:exon
so has part: feature:2718263-2718380:-1:exon
so has part: feature:2717543-2717766:-1:exon
so has part: feature:2716519-2716668:-1:exon
so has part: feature:2713443-2713517:-1:exon
so has part: feature:2705276-2705418:-1:exon
so has part: feature:2699380-2699433:-1:exon
so has part: feature:2697589-2697609:-1:exon
so has part: feature:2688786-2689007:-1:exon
so has part: feature:2686683-2686867:-1:exon

XP_032901472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2852352-2852459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2849874-2849995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2846150-2846339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2838402-2838581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2817765-2817878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2814199-2814255:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2810751-2810803:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2804833-2804899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2802960-2803132:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2796767-2796872:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2795251-2795429:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2794442-2794496:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2789702-2789803:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2785564-2785694:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2781336-2781512:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2778605-2778792:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2772725-2772787:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2772265-2772407:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2769492-2769624:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2766123-2766633:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2762169-2762301:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2761341-2761527:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2758495-2758662:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2756654-2756826:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2755040-2755078:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2754022-2754142:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2751810-2751914:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2748587-2748687:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2747035-2747206:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2743919-2744062:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2740899-2740979:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2740024-2740265:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2738091-2738439:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2732046-2732264:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2730061-2730261:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2729821-2729976:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2726883-2727023:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2726254-2726419:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2725439-2725576:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2724323-2724527:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2723944-2724268:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2719702-2719833:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2718423-2718492:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2718263-2718380:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2717543-2717766:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2716519-2716668:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2713443-2713517:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2705276-2705418:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2699380-2699433:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2697589-2697609:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2688786-2689007:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2686683-2686867:-1:exon

ncor1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ncor1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor corepressor 1 isoform X2
translation: MSSSGYPSGQGPFGADATRYPAHAIQYTFSSGRHQQEFAVPDYRSHLQDSQLLQQQQHQQLRRRPSLLSEFHPASDRPQERRSGYDQSYHSVAGQPDHDSLETKRPRLEQVPEPHFQRATVLPLVHPLPEGLRAPTEVKKESFSMKVDVPSSPSTNQQGGDEQDSSPSKLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEAKHRSIVQIIYDENRKKAEEAHKILEGLGPRVELPLYNQPSDTKIYHENIKTNQVMRKKLILFFKRRNHARKQREQKICQRYDQLMEVWEKKVDRIENNPRRKAKEGKTREYYEKQFPEIRKQREQQERFQSDNLSRVGQRGAGLPATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDVEQQRVKFLNLNGVMDDPMRVYKERQFINVWSEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYLTKKNENYKNLVRRNYGRRRGRNTQQISRPSQEEKEAEKEEEKVEKIEKEEKDEKKEEEKDEKEEPQRLKQHGKSPFDSICPCRCISESGSFASENETARTLEEQHLIFRLGSLQPNGTNIELSNFREAVKEKEKSDTAGEEPEEKEQSVLRGRKTANSQGRRKGRILRSMAKEAIAEEPPNPPPPPELAVAEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDMLLQQHKLRVQQMSRRSREDREVSQCESIASTVSVQEDEDNEVSNEEENAEDSEAAENSSDTESAPSPSPMLNKPSKENTEANRVMGEELNHSTQNIPDVPPASATPAAASPELHIKQEMNLGFEESMEEQRDSDAEAKPLFDPLVKTKSEPVDAYVKPEESVQVKVEVDAKDREFEKARQQEAMRPEILDLPQTGAQMEAQSDNDSSATCSADEVEDGESERQRMYPSESKPSLLKPLSSMLMASTMKPMVQMDIQQLQQRAAMIPSMMGTPYMPAGAPVSGLALLQRHIKAAHDCALQEEQARQHLDNERRNSASPNISSKGCPIPGREGKSYAFIPFHDNRRGMEQESQAAGARSASPYRLSPRESCKLSPQPEMSTLRYSVPPVLQPAPHQVMQTSEGGKIVITRPTRPSNIPSPPPLIPSTKPQLPCEKPSYIMGTSISQQYMDAAVCQSRLQIAPGVYLPPHSQVSYSQEAVKNAVGSISLGLPRQQEPVKPGSLQYIKQEELSPRSHNPQPEGLLSRAAYEANMVRGGQIATIQDTGMTRCSPISKVSAEPPSYRGSITQGTPGLSQQGIAADALLKGAINKLASEDLGSPEQSREEAMSKGHVIYESKSGHILSYDTAKNVREGTRSPRTGLELHGVKRSYDLMEAGMNRGLSMRDSPVPTPYEGLISRARESPHLPESKDRTVPSGSIMQGTPRASSDSFDEGIKYSKQIKRESSPLRTFEGSITKGKPYEGVTTIKEMGRSIHEIPRQECRKTPEMVQSNRPIVEGSISQGTPVKHESQSAIKHDVKSLITMTSKHPHPMHQLEKISEGVKVMERKYEEMKPSDQLRVRHSAVTSSGTSVLRSTMHEAAKSQLSPGLYEDPNARRTPVGYPGYITRGPPMVSRSQEVVTTSGKSCPDRKATMVSAQRENISVKSPVSVVDPSATLSPYESLHGRGNPEFRGHVPLPFDQTMAFHRALDPAYLFPRQLSPNPNYSNHYQLYAMENTRQTILNDYITSQQMQVITKPDGTRGMSPRETLGVPYAAGARVCSFAGIIDLAQMPHTILVPGGSSTPPMDRITYIPGNQAPYPGRYNHSPISPGHPAHISASAANAEREREKEREREREREQRERERMAVTTCDLSYLRAGPEQTSRPNSHGYVRSPSPSIRPQETILQQRPSIFQGANGKGVITSLDAATQPRIMFSQDMMVPHRSSSPDPILTSNAVCVDFARSPGVLWFPPTSQRLAGWQVPQGALSIAQGISASRFSTAADALAALVDAAASAPQ…
SIO_010081: ncor1
subclass of: SO_0000673
so part of: ncor1
location: complement(join(2686683..2686867,2688786..2689007,2697589..2697609,2699380..2699433,2705276..2705418,2713443..2713517,2716519..2716668,2717543..2717766,2718263..2718386,2718423..2718492,2719702..2719833,2723944..2724247,2724308..2724527,2725439..2725576,2726254..2726419,2726883..2727023,2729821..2729976,2730061..2730261,2732046..2732264,2738091..2738439,2740024..2740265,2740899..2740979,2743919..2744062,2747035..2747206,2748587..2748687,2751810..2751914,2754022..2754142,2755040..2755078,2756654..2756826,2758495..2758662,2761341..2761527,2762169..2762301,2766123..2766633,2769492..2769624,2772265..2772407,2772725..2772787,2778605..2778792,2781336..2781512,2785564..2785694,2789702..2789803,2794442..2794496,2795251..2795429,2796767..2796872,2802960..2803132,2804833..2804899,2810751..2810803,2814199..2814255,2817765..2817878,2838402..2838581,2846150..2846339,2849874..2849995,2852352..2852459))
location: region:2686683-2852459:-1
so has part: feature:2852352-2852459:-1:exon
so has part: feature:2849874-2849995:-1:exon
so has part: feature:2846150-2846339:-1:exon
so has part: feature:2838402-2838581:-1:exon
so has part: feature:2817765-2817878:-1:exon
so has part: feature:2814199-2814255:-1:exon
so has part: feature:2810751-2810803:-1:exon
so has part: feature:2804833-2804899:-1:exon
so has part: feature:2802960-2803132:-1:exon
so has part: feature:2796767-2796872:-1:exon
so has part: feature:2795251-2795429:-1:exon
so has part: feature:2794442-2794496:-1:exon
so has part: feature:2789702-2789803:-1:exon
so has part: feature:2785564-2785694:-1:exon
so has part: feature:2781336-2781512:-1:exon
so has part: feature:2778605-2778792:-1:exon
so has part: feature:2772725-2772787:-1:exon
so has part: feature:2772265-2772407:-1:exon
so has part: feature:2769492-2769624:-1:exon
so has part: feature:2766123-2766633:-1:exon
so has part: feature:2762169-2762301:-1:exon
so has part: feature:2761341-2761527:-1:exon
so has part: feature:2758495-2758662:-1:exon
so has part: feature:2756654-2756826:-1:exon
so has part: feature:2755040-2755078:-1:exon
so has part: feature:2754022-2754142:-1:exon
so has part: feature:2751810-2751914:-1:exon
so has part: feature:2748587-2748687:-1:exon
so has part: feature:2747035-2747206:-1:exon
so has part: feature:2743919-2744062:-1:exon
so has part: feature:2740899-2740979:-1:exon
so has part: feature:2740024-2740265:-1:exon
so has part: feature:2738091-2738439:-1:exon
so has part: feature:2732046-2732264:-1:exon
so has part: feature:2730061-2730261:-1:exon
so has part: feature:2729821-2729976:-1:exon
so has part: feature:2726883-2727023:-1:exon
so has part: feature:2726254-2726419:-1:exon
so has part: feature:2725439-2725576:-1:exon
so has part: feature:2724308-2724527:-1:exon
so has part: feature:2723944-2724247:-1:exon
so has part: feature:2719702-2719833:-1:exon
so has part: feature:2718423-2718492:-1:exon
so has part: feature:2718263-2718386:-1:exon
so has part: feature:2717543-2717766:-1:exon
so has part: feature:2716519-2716668:-1:exon
so has part: feature:2713443-2713517:-1:exon
so has part: feature:2705276-2705418:-1:exon
so has part: feature:2699380-2699433:-1:exon
so has part: feature:2697589-2697609:-1:exon
so has part: feature:2688786-2689007:-1:exon
so has part: feature:2686683-2686867:-1:exon

XP_032901474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2852352-2852459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2849874-2849995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2846150-2846339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2838402-2838581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2817765-2817878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2814199-2814255:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2810751-2810803:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2804833-2804899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2802960-2803132:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2796767-2796872:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2795251-2795429:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2794442-2794496:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2789702-2789803:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2785564-2785694:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2781336-2781512:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2778605-2778792:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2772725-2772787:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2772265-2772407:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2769492-2769624:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2766123-2766633:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2762169-2762301:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2761341-2761527:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2758495-2758662:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2756654-2756826:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2755040-2755078:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2754022-2754142:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2751810-2751914:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2748587-2748687:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2747035-2747206:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2743919-2744062:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2740899-2740979:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2740024-2740265:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2738091-2738439:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2732046-2732264:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2730061-2730261:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2729821-2729976:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2726883-2727023:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2726254-2726419:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2725439-2725576:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2724308-2724527:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2723944-2724247:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2719702-2719833:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2718423-2718492:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2718263-2718386:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2717543-2717766:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2716519-2716668:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2713443-2713517:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2705276-2705418:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2699380-2699433:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2697589-2697609:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2688786-2689007:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2686683-2686867:-1:exon

pigl
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: pigl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2866815..2916774
location: region:2866815-2916774:1
so has part: feature:2866815-2916774:1:exon
subclass of: SO_0000010

116988732
type: Gene
SIO_000068: ncbigene

position:2866815:1
position: 2866815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2916774:1
position: 2916774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2866815-2916774:1:exon

pigl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pigl
product: phosphatidylinositol glycan anchor biosynthesis class L
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_033045587.1
SIO_010081: pigl
subclass of: SO_0000673
so part of: pigl
location: join(2866815..2867850,2881873..2881972,2897232..2897322,2900257..2900324,2907730..2907761,2912783..2912916,2916056..2916774)
location: region:2866815-2916774:1
so has part: feature:2866815-2867850:1:exon
so has part: feature:2881873-2881972:1:exon
so has part: feature:2897232-2897322:1:exon
so has part: feature:2900257-2900324:1:exon
so has part: feature:2907730-2907761:1:exon
so has part: feature:2912783-2912916:1:exon
so has part: feature:2916056-2916774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2866815-2867850:1:exon

position:2867850:1
position: 2867850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2881873-2881972:1:exon

position:2881873:1
position: 2881873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2881972:1
position: 2881972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2897232-2897322:1:exon

position:2897232:1
position: 2897232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2897322:1
position: 2897322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2900257-2900324:1:exon

position:2900257:1
position: 2900257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2900324:1
position: 2900324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2907730-2907761:1:exon

position:2907730:1
position: 2907730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2907761:1
position: 2907761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2912783-2912916:1:exon

position:2912783:1
position: 2912783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2912916:1
position: 2912916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2916056-2916774:1:exon

position:2916056:1
position: 2916056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pigl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pigl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
translation: MEMVGLCCLLALSLLYSLWIRYIYRQKRSRSRVEPGPGTSALLVIAHPDDECMFFAPALLRLGGRRLPVRLLCLSTGNFYNQGEVRKKELVQSCAVLGIPSSYVTILDHRDLPDHPRVRWDPELIALLILDYMTMHHINLVMTFDKNGVSGHANHAAVYYAVRKLWSERKLPNDCQALVLESTNVLRKYISILDLPISWLRPHHVMYILQNQEYQQAKAAMYCHQSQLLWFRHLYLYLSRYMVINTFHLLSD
SIO_010081: pigl
subclass of: SO_0000673
so part of: pigl
location: join(2867622..2867850,2881873..2881972,2897232..2897322,2900257..2900324,2907730..2907761,2912783..2912916,2916056..2916160)
location: region:2867622-2916160:1
so has part: feature:2867622-2867850:1:exon
so has part: feature:2881873-2881972:1:exon
so has part: feature:2897232-2897322:1:exon
so has part: feature:2900257-2900324:1:exon
so has part: feature:2907730-2907761:1:exon
so has part: feature:2912783-2912916:1:exon
so has part: feature:2916056-2916160:1:exon

XP_032901478.1
type: Protein
SIO_000068: ncbiprotein

position:2867622:1
position: 2867622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2916160:1
position: 2916160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2867622-2867850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2881873-2881972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2897232-2897322:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2900257-2900324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2907730-2907761:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2912783-2912916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2916056-2916160:1:exon

LOC116988733
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2947660..2953283
location: region:2947660-2953283:1
so has part: feature:2947660-2953283:1:exon
subclass of: SO_0000010

116988733
type: Gene
SIO_000068: ncbigene

position:2947660:1
position: 2947660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2953283:1
position: 2953283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2947660-2953283:1:exon

LOC116988733
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988733
product: polyubiquitin-C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 244 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_033045588.1
SIO_010081: LOC116988733
subclass of: SO_0000673
so part of: LOC116988733
location: join(2947660..2947979,2949272..2953283)
location: region:2947660-2953283:1
so has part: feature:2947660-2947979:1:exon
so has part: feature:2949272-2953283:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2947660-2947979:1:exon

position:2947979:1
position: 2947979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2949272-2953283:1:exon

position:2949272:1
position: 2949272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988733
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyubiquitin-C
translation: MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGGL
SIO_010081: LOC116988733
subclass of: SO_0000673
so part of: LOC116988733
location: 2949278..2953159
location: region:2949278-2953159:1
so has part: feature:2949278-2953159:1:exon

XP_032901479.1
type: Protein
SIO_000068: ncbiprotein

position:2949278:1
position: 2949278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2953159:1
position: 2953159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2949278-2953159:1:exon

LOC116988735
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2957460..3045820)
location: region:2957460-3045820:-1
so has part: feature:2957460-3045820:-1:exon
subclass of: SO_0000010

116988735
type: Gene
SIO_000068: ncbigene

position:2957460:-1
position: 2957460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3045820:-1
position: 3045820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2957460-3045820:-1:exon

LOC116988735
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988735
product: uncharacterized LOC116988735, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033045593.1
SIO_010081: LOC116988735
subclass of: SO_0000673
so part of: LOC116988735
location: complement(join(2957460..2958029,2962895..2962983,2964616..2964726,2967583..2967665,2969124..2969152,2973595..2973687,2978373..2978463,2979092..2979169,2980042..2980123,2983024..2983177,2985878..2986017,2987025..2987099,2991173..2991284,2999974..3000191,3028053..3028170,3032056..3032198,3037711..3037849,3045714..3045820))
location: region:2957460-3045820:-1
so has part: feature:3045714-3045820:-1:exon
so has part: feature:3037711-3037849:-1:exon
so has part: feature:3032056-3032198:-1:exon
so has part: feature:3028053-3028170:-1:exon
so has part: feature:2999974-3000191:-1:exon
so has part: feature:2991173-2991284:-1:exon
so has part: feature:2987025-2987099:-1:exon
so has part: feature:2985878-2986017:-1:exon
so has part: feature:2983024-2983177:-1:exon
so has part: feature:2980042-2980123:-1:exon
so has part: feature:2979092-2979169:-1:exon
so has part: feature:2978373-2978463:-1:exon
so has part: feature:2973595-2973687:-1:exon
so has part: feature:2969124-2969152:-1:exon
so has part: feature:2967583-2967665:-1:exon
so has part: feature:2964616-2964726:-1:exon
so has part: feature:2962895-2962983:-1:exon
so has part: feature:2957460-2958029:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3045714-3045820:-1:exon

position:3045714:-1
position: 3045714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3037711-3037849:-1:exon

position:3037711:-1
position: 3037711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3037849:-1
position: 3037849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3032056-3032198:-1:exon

position:3032056:-1
position: 3032056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3032198:-1
position: 3032198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3028053-3028170:-1:exon

position:3028053:-1
position: 3028053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3028170:-1
position: 3028170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2999974-3000191:-1:exon

position:2999974:-1
position: 2999974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3000191:-1
position: 3000191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2991173-2991284:-1:exon

position:2991173:-1
position: 2991173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2991284:-1
position: 2991284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2987025-2987099:-1:exon

position:2987025:-1
position: 2987025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2987099:-1
position: 2987099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2985878-2986017:-1:exon

position:2985878:-1
position: 2985878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2986017:-1
position: 2986017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2983024-2983177:-1:exon

position:2983024:-1
position: 2983024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2983177:-1
position: 2983177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2980042-2980123:-1:exon

position:2980042:-1
position: 2980042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2980123:-1
position: 2980123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2979092-2979169:-1:exon

position:2979092:-1
position: 2979092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2979169:-1
position: 2979169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2978373-2978463:-1:exon

position:2978373:-1
position: 2978373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2978463:-1
position: 2978463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2973595-2973687:-1:exon

position:2973595:-1
position: 2973595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2973687:-1
position: 2973687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2969124-2969152:-1:exon

position:2969124:-1
position: 2969124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2969152:-1
position: 2969152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2967583-2967665:-1:exon

position:2967583:-1
position: 2967583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2967665:-1
position: 2967665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2964616-2964726:-1:exon

position:2964616:-1
position: 2964616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2964726:-1
position: 2964726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2962895-2962983:-1:exon

position:2962895:-1
position: 2962895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2962983:-1
position: 2962983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2957460-2958029:-1:exon

position:2958029:-1
position: 2958029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988735
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988735
product: uncharacterized LOC116988735, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033045590.1
SIO_010081: LOC116988735
subclass of: SO_0000673
so part of: LOC116988735
location: complement(join(2957460..2958029,2962895..2962983,2964616..2964726,2967583..2967665,2969124..2969152,2973595..2973687,2978373..2978463,2979092..2979169,2980042..2980123,2983024..2983177,2985878..2986017,2987025..2987099,2991173..2991284,2999974..3000191,3004307..3004435,3028053..3028170,3032056..3032198,3037711..3037849,3045714..3045820))
location: region:2957460-3045820:-1
so has part: feature:3045714-3045820:-1:exon
so has part: feature:3037711-3037849:-1:exon
so has part: feature:3032056-3032198:-1:exon
so has part: feature:3028053-3028170:-1:exon
so has part: feature:3004307-3004435:-1:exon
so has part: feature:2999974-3000191:-1:exon
so has part: feature:2991173-2991284:-1:exon
so has part: feature:2987025-2987099:-1:exon
so has part: feature:2985878-2986017:-1:exon
so has part: feature:2983024-2983177:-1:exon
so has part: feature:2980042-2980123:-1:exon
so has part: feature:2979092-2979169:-1:exon
so has part: feature:2978373-2978463:-1:exon
so has part: feature:2973595-2973687:-1:exon
so has part: feature:2969124-2969152:-1:exon
so has part: feature:2967583-2967665:-1:exon
so has part: feature:2964616-2964726:-1:exon
so has part: feature:2962895-2962983:-1:exon
so has part: feature:2957460-2958029:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3045714-3045820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3037711-3037849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032056-3032198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028053-3028170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004307-3004435:-1:exon

position:3004307:-1
position: 3004307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3004435:-1
position: 3004435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2999974-3000191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2991173-2991284:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2987025-2987099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2985878-2986017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2983024-2983177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2980042-2980123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2979092-2979169:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2978373-2978463:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2973595-2973687:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2969124-2969152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2967583-2967665:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2964616-2964726:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2962895-2962983:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2957460-2958029:-1:exon

LOC116988735
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988735
product: uncharacterized LOC116988735, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033045592.1
SIO_010081: LOC116988735
subclass of: SO_0000673
so part of: LOC116988735
location: complement(join(2957717..2958029,2962895..2962983,2964616..2964726,2967583..2967665,2969124..2969152,2973595..2973687,2978373..2978463,2979092..2979169,2980042..2980123,2983024..2983177,2985878..2986017,2991173..2991284,2999974..3000191,3004307..3004435,3028053..3028170,3032056..3032198,3037711..3037849,3045714..3045820))
location: region:2957717-3045820:-1
so has part: feature:3045714-3045820:-1:exon
so has part: feature:3037711-3037849:-1:exon
so has part: feature:3032056-3032198:-1:exon
so has part: feature:3028053-3028170:-1:exon
so has part: feature:3004307-3004435:-1:exon
so has part: feature:2999974-3000191:-1:exon
so has part: feature:2991173-2991284:-1:exon
so has part: feature:2985878-2986017:-1:exon
so has part: feature:2983024-2983177:-1:exon
so has part: feature:2980042-2980123:-1:exon
so has part: feature:2979092-2979169:-1:exon
so has part: feature:2978373-2978463:-1:exon
so has part: feature:2973595-2973687:-1:exon
so has part: feature:2969124-2969152:-1:exon
so has part: feature:2967583-2967665:-1:exon
so has part: feature:2964616-2964726:-1:exon
so has part: feature:2962895-2962983:-1:exon
so has part: feature:2957717-2958029:-1:exon

position:2957717:-1
position: 2957717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3045714-3045820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3037711-3037849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032056-3032198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028053-3028170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004307-3004435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2999974-3000191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2991173-2991284:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2985878-2986017:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2983024-2983177:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2980042-2980123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2979092-2979169:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2978373-2978463:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2973595-2973687:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2969124-2969152:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2967583-2967665:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2964616-2964726:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2962895-2962983:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2957717-2958029:-1:exon

LOC116988735
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988735
product: uncharacterized LOC116988735, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033045591.1
SIO_010081: LOC116988735
subclass of: SO_0000673
so part of: LOC116988735
location: complement(join(2957717..2958029,2962895..2962983,2964616..2964726,2967583..2967665,2969124..2969152,2973595..2973687,2978373..2978463,2979092..2979169,2980042..2980123,2983024..2983177,2985878..2986017,2987025..2987099,2991173..2991284,2999974..3000191,3004307..3004435,3028053..3028170,3032056..3032198,3037711..3037849,3045741..3045798))
location: region:2957717-3045798:-1
so has part: feature:3045741-3045798:-1:exon
so has part: feature:3037711-3037849:-1:exon
so has part: feature:3032056-3032198:-1:exon
so has part: feature:3028053-3028170:-1:exon
so has part: feature:3004307-3004435:-1:exon
so has part: feature:2999974-3000191:-1:exon
so has part: feature:2991173-2991284:-1:exon
so has part: feature:2987025-2987099:-1:exon
so has part: feature:2985878-2986017:-1:exon
so has part: feature:2983024-2983177:-1:exon
so has part: feature:2980042-2980123:-1:exon
so has part: feature:2979092-2979169:-1:exon
so has part: feature:2978373-2978463:-1:exon
so has part: feature:2973595-2973687:-1:exon
so has part: feature:2969124-2969152:-1:exon
so has part: feature:2967583-2967665:-1:exon
so has part: feature:2964616-2964726:-1:exon
so has part: feature:2962895-2962983:-1:exon
so has part: feature:2957717-2958029:-1:exon

position:3045798:-1
position: 3045798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3045741-3045798:-1:exon

position:3045741:-1
position: 3045741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3037711-3037849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032056-3032198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028053-3028170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004307-3004435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2999974-3000191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2991173-2991284:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2987025-2987099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2985878-2986017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2983024-2983177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2980042-2980123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2979092-2979169:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2978373-2978463:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2973595-2973687:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2969124-2969152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2967583-2967665:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2964616-2964726:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2962895-2962983:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2957717-2958029:-1:exon

LOC116988735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116988735 isoform X4
translation: MATAPRQHTHTGRQMAASWLAEVREQVHLSQVWQEYSKELFDVVLQQLAEGHVDFFTDLSTSEKALFVDRAAKAVNGGSIYRALVSRINSALEEQFGKRLSYKMHESKSMRTRTEAFGSRIQDGVVSLLQKWPDMKSKLHILFNHSLPPDLRKLTWNLYLSNTKDAAKIMSNVLSYYQRIQHSSDYLSEANYLLLVPLVQVSLAATTLSALLNVPSTQLVEEYVTFMEWWKRELVNQMPGSSADDNLFEGMANMLDEKDKEVSAIIQKIYTQQAGNQSRQDLLRGLQSLLNPVISTLFVGYLNMETLLYVWDQHIIGLGHPSYNCLPAFCLAFILLLREHLQICKTPGDVDAVLRSHAAELTSLQFQKVIKEHFYSNLYKSLTKQNTDVFMALDSDQEKVLPAWTHLFRNHLPYRSQPKERQQAREQRDAQHMQCLKEAKLTKLREDEEQSTKEKKLQSLLEESQRINQEQKISFEEKLRQERHLQYEMQRKAEEQVNQLQVEMRHVMQQRQFSTDAYSLTSFIPPPPASLESTRSSGIRKPGQSVPPEDLKITTPILTMNQHQPTGKGGHVTLDILHYLMHTTNSIANGFGEQTLLNKTTQEQLQTYQQDVRNAEFQLFGHHVDSDELDTIHEPKRSELSRKLTDAVQRGVETRYRAHLSQQEMFSNTHML
SIO_010081: LOC116988735
subclass of: SO_0000673
so part of: LOC116988735
location: complement(join(2957859..2958029,2962895..2962983,2964616..2964726,2967583..2967665,2969124..2969152,2973595..2973687,2978373..2978463,2979092..2979169,2980042..2980123,2983024..2983177,2985878..2986017,2987025..2987099,2991173..2991284,2999974..3000191,3028053..3028170,3032056..3032198,3037711..3037849,3045714..3045806))
location: region:2957859-3045806:-1
so has part: feature:3045714-3045806:-1:exon
so has part: feature:3037711-3037849:-1:exon
so has part: feature:3032056-3032198:-1:exon
so has part: feature:3028053-3028170:-1:exon
so has part: feature:2999974-3000191:-1:exon
so has part: feature:2991173-2991284:-1:exon
so has part: feature:2987025-2987099:-1:exon
so has part: feature:2985878-2986017:-1:exon
so has part: feature:2983024-2983177:-1:exon
so has part: feature:2980042-2980123:-1:exon
so has part: feature:2979092-2979169:-1:exon
so has part: feature:2978373-2978463:-1:exon
so has part: feature:2973595-2973687:-1:exon
so has part: feature:2969124-2969152:-1:exon
so has part: feature:2967583-2967665:-1:exon
so has part: feature:2964616-2964726:-1:exon
so has part: feature:2962895-2962983:-1:exon
so has part: feature:2957859-2958029:-1:exon

XP_032901484.1
type: Protein
SIO_000068: ncbiprotein

position:2957859:-1
position: 2957859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3045806:-1
position: 3045806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3045714-3045806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3037711-3037849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032056-3032198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028053-3028170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2999974-3000191:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2991173-2991284:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2987025-2987099:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2985878-2986017:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2983024-2983177:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2980042-2980123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2979092-2979169:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2978373-2978463:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2973595-2973687:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2969124-2969152:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2967583-2967665:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2964616-2964726:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2962895-2962983:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2957859-2958029:-1:exon

LOC116988735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116988735 isoform X3
translation: MATAPRQHTHTGRQMAASWLAEVREQVHLSQVWQEYSKELFDVVLQQLAEGHVDFFTDLSTSEKALFVDRAAKAVNGGSIYRALVSRINSALEEQFGKRLSYKMHESKSMRTRTEAFGSRIQDGVVSLLQKWPDMKSKLHILFNHSLPPDLRKLTWNLYLSNTKVRMEYLSWLSLNLAQSNTDKAIFLKCESLLSSEPTFKTLSETKYAAKIMSNVLSYYQRIQHSSDYLSEANYLLLVPLVQVSLAATTLSALLNVPSTQLVEEYVTFMEWWKRELVNQMPGSSADDNLFEGMANMLDEKDKEVSAIIQKIYTQQAGYLNMETLLYVWDQHIIGLGHPSYNCLPAFCLAFILLLREHLQICKTPGDVDAVLRSHAAELTSLQFQKVIKEHFYSNLYKSLTKQNTDVFMALDSDQEKVLPAWTHLFRNHLPYRSQPKERQQAREQRDAQHMQCLKEAKLTKLREDEEQSTKEKKLQSLLEESQRINQEQKISFEEKLRQERHLQYEMQRKAEEQVNQLQVEMRHVMQQRQFSTDAYSLTSFIPPPPASLESTRSSGIRKPGQSVPPEDLKITTPILTMNQHQPTGKGGHVTLDILHYLMHTTNSIANGFGEQTLLNKTTQEQLQTYQQDVRNAEFQLFGHHVDSDELDTIHEPKRSELSRKLTDAVQRGVETRYRAHLSQQEMFSNTHML
SIO_010081: LOC116988735
subclass of: SO_0000673
so part of: LOC116988735
location: complement(join(2957859..2958029,2962895..2962983,2964616..2964726,2967583..2967665,2969124..2969152,2973595..2973687,2978373..2978463,2979092..2979169,2980042..2980123,2983024..2983177,2985878..2986017,2991173..2991284,2999974..3000191,3004307..3004435,3028053..3028170,3032056..3032198,3037711..3037849,3045714..3045806))
location: region:2957859-3045806:-1
so has part: feature:3045714-3045806:-1:exon
so has part: feature:3037711-3037849:-1:exon
so has part: feature:3032056-3032198:-1:exon
so has part: feature:3028053-3028170:-1:exon
so has part: feature:3004307-3004435:-1:exon
so has part: feature:2999974-3000191:-1:exon
so has part: feature:2991173-2991284:-1:exon
so has part: feature:2985878-2986017:-1:exon
so has part: feature:2983024-2983177:-1:exon
so has part: feature:2980042-2980123:-1:exon
so has part: feature:2979092-2979169:-1:exon
so has part: feature:2978373-2978463:-1:exon
so has part: feature:2973595-2973687:-1:exon
so has part: feature:2969124-2969152:-1:exon
so has part: feature:2967583-2967665:-1:exon
so has part: feature:2964616-2964726:-1:exon
so has part: feature:2962895-2962983:-1:exon
so has part: feature:2957859-2958029:-1:exon

XP_032901483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3045714-3045806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3037711-3037849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032056-3032198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028053-3028170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004307-3004435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2999974-3000191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2991173-2991284:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2985878-2986017:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2983024-2983177:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2980042-2980123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2979092-2979169:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2978373-2978463:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2973595-2973687:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2969124-2969152:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2967583-2967665:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2964616-2964726:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2962895-2962983:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2957859-2958029:-1:exon

LOC116988735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116988735 isoform X1
translation: MATAPRQHTHTGRQMAASWLAEVREQVHLSQVWQEYSKELFDVVLQQLAEGHVDFFTDLSTSEKALFVDRAAKAVNGGSIYRALVSRINSALEEQFGKRLSYKMHESKSMRTRTEAFGSRIQDGVVSLLQKWPDMKSKLHILFNHSLPPDLRKLTWNLYLSNTKVRMEYLSWLSLNLAQSNTDKAIFLKCESLLSSEPTFKTLSETKYAAKIMSNVLSYYQRIQHSSDYLSEANYLLLVPLVQVSLAATTLSALLNVPSTQLVEEYVTFMEWWKRELVNQMPGSSADDNLFEGMANMLDEKDKEVSAIIQKIYTQQAGNQSRQDLLRGLQSLLNPVISTLFVGYLNMETLLYVWDQHIIGLGHPSYNCLPAFCLAFILLLREHLQICKTPGDVDAVLRSHAAELTSLQFQKVIKEHFYSNLYKSLTKQNTDVFMALDSDQEKVLPAWTHLFRNHLPYRSQPKERQQAREQRDAQHMQCLKEAKLTKLREDEEQSTKEKKLQSLLEESQRINQEQKISFEEKLRQERHLQYEMQRKAEEQVNQLQVEMRHVMQQRQFSTDAYSLTSFIPPPPASLESTRSSGIRKPGQSVPPEDLKITTPILTMNQHQPTGKGGHVTLDILHYLMHTTNSIANGFGEQTLLNKTTQEQLQTYQQDVRNAEFQLFGHHVDSDELDTIHEPKRSELSRKLTDAVQRGVETRYRAHLSQQEMFSNTHML
SIO_010081: LOC116988735
subclass of: SO_0000673
so part of: LOC116988735
location: complement(join(2957859..2958029,2962895..2962983,2964616..2964726,2967583..2967665,2969124..2969152,2973595..2973687,2978373..2978463,2979092..2979169,2980042..2980123,2983024..2983177,2985878..2986017,2987025..2987099,2991173..2991284,2999974..3000191,3004307..3004435,3028053..3028170,3032056..3032198,3037711..3037849,3045714..3045806))
location: region:2957859-3045806:-1
so has part: feature:3045714-3045806:-1:exon
so has part: feature:3037711-3037849:-1:exon
so has part: feature:3032056-3032198:-1:exon
so has part: feature:3028053-3028170:-1:exon
so has part: feature:3004307-3004435:-1:exon
so has part: feature:2999974-3000191:-1:exon
so has part: feature:2991173-2991284:-1:exon
so has part: feature:2987025-2987099:-1:exon
so has part: feature:2985878-2986017:-1:exon
so has part: feature:2983024-2983177:-1:exon
so has part: feature:2980042-2980123:-1:exon
so has part: feature:2979092-2979169:-1:exon
so has part: feature:2978373-2978463:-1:exon
so has part: feature:2973595-2973687:-1:exon
so has part: feature:2969124-2969152:-1:exon
so has part: feature:2967583-2967665:-1:exon
so has part: feature:2964616-2964726:-1:exon
so has part: feature:2962895-2962983:-1:exon
so has part: feature:2957859-2958029:-1:exon

XP_032901481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3045714-3045806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3037711-3037849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032056-3032198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028053-3028170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004307-3004435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2999974-3000191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2991173-2991284:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2987025-2987099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2985878-2986017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2983024-2983177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2980042-2980123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2979092-2979169:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2978373-2978463:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2973595-2973687:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2969124-2969152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2967583-2967665:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2964616-2964726:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2962895-2962983:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2957859-2958029:-1:exon

LOC116988735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116988735 isoform X2
translation: MAASWLAEVWQEYSKELFDVVLQQLAEGHVDFFTDLSTSEKALFVDRAAKAVNGGSIYRALVSRINSALEEQFGKRLSYKMHESKSMRTRTEAFGSRIQDGVVSLLQKWPDMKSKLHILFNHSLPPDLRKLTWNLYLSNTKVRMEYLSWLSLNLAQSNTDKAIFLKCESLLSSEPTFKTLSETKYAAKIMSNVLSYYQRIQHSSDYLSEANYLLLVPLVQVSLAATTLSALLNVPSTQLVEEYVTFMEWWKRELVNQMPGSSADDNLFEGMANMLDEKDKEVSAIIQKIYTQQAGNQSRQDLLRGLQSLLNPVISTLFVGYLNMETLLYVWDQHIIGLGHPSYNCLPAFCLAFILLLREHLQICKTPGDVDAVLRSHAAELTSLQFQKVIKEHFYSNLYKSLTKQNTDVFMALDSDQEKVLPAWTHLFRNHLPYRSQPKERQQAREQRDAQHMQCLKEAKLTKLREDEEQSTKEKKLQSLLEESQRINQEQKISFEEKLRQERHLQYEMQRKAEEQVNQLQVEMRHVMQQRQFSTDAYSLTSFIPPPPASLESTRSSGIRKPGQSVPPEDLKITTPILTMNQHQPTGKGGHVTLDILHYLMHTTNSIANGFGEQTLLNKTTQEQLQTYQQDVRNAEFQLFGHHVDSDELDTIHEPKRSELSRKLTDAVQRGVETRYRAHLSQQEMFSNTHML
SIO_010081: LOC116988735
subclass of: SO_0000673
so part of: LOC116988735
location: complement(join(2957859..2958029,2962895..2962983,2964616..2964726,2967583..2967665,2969124..2969152,2973595..2973687,2978373..2978463,2979092..2979169,2980042..2980123,2983024..2983177,2985878..2986017,2987025..2987099,2991173..2991284,2999974..3000191,3004307..3004435,3028053..3028170,3032056..3032198,3037711..3037849,3045741..3045764))
location: region:2957859-3045764:-1
so has part: feature:3045741-3045764:-1:exon
so has part: feature:3037711-3037849:-1:exon
so has part: feature:3032056-3032198:-1:exon
so has part: feature:3028053-3028170:-1:exon
so has part: feature:3004307-3004435:-1:exon
so has part: feature:2999974-3000191:-1:exon
so has part: feature:2991173-2991284:-1:exon
so has part: feature:2987025-2987099:-1:exon
so has part: feature:2985878-2986017:-1:exon
so has part: feature:2983024-2983177:-1:exon
so has part: feature:2980042-2980123:-1:exon
so has part: feature:2979092-2979169:-1:exon
so has part: feature:2978373-2978463:-1:exon
so has part: feature:2973595-2973687:-1:exon
so has part: feature:2969124-2969152:-1:exon
so has part: feature:2967583-2967665:-1:exon
so has part: feature:2964616-2964726:-1:exon
so has part: feature:2962895-2962983:-1:exon
so has part: feature:2957859-2958029:-1:exon

XP_032901482.1
type: Protein
SIO_000068: ncbiprotein

position:3045764:-1
position: 3045764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3045741-3045764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3037711-3037849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032056-3032198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028053-3028170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004307-3004435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2999974-3000191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2991173-2991284:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2987025-2987099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2985878-2986017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2983024-2983177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2980042-2980123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2979092-2979169:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2978373-2978463:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2973595-2973687:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2969124-2969152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2967583-2967665:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2964616-2964726:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2962895-2962983:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2957859-2958029:-1:exon

LOC116988735
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988735
product: uncharacterized LOC116988735, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033045594.1
SIO_010081: LOC116988735
subclass of: SO_0000673
so part of: LOC116988735
location: complement(join(2957864..2958029,2964616..2964726,2967583..2967665,2969124..2969152,2973595..2973687,2978373..2978463,2979092..2979169,2980042..2980123,2983024..2983177,2985878..2986017,2987025..2987099,2991173..2991284,2999974..3000191,3004307..3004435,3028053..3028170,3032056..3032198,3037711..3037849,3045714..3045820))
location: region:2957864-3045820:-1
so has part: feature:3045714-3045820:-1:exon
so has part: feature:3037711-3037849:-1:exon
so has part: feature:3032056-3032198:-1:exon
so has part: feature:3028053-3028170:-1:exon
so has part: feature:3004307-3004435:-1:exon
so has part: feature:2999974-3000191:-1:exon
so has part: feature:2991173-2991284:-1:exon
so has part: feature:2987025-2987099:-1:exon
so has part: feature:2985878-2986017:-1:exon
so has part: feature:2983024-2983177:-1:exon
so has part: feature:2980042-2980123:-1:exon
so has part: feature:2979092-2979169:-1:exon
so has part: feature:2978373-2978463:-1:exon
so has part: feature:2973595-2973687:-1:exon
so has part: feature:2969124-2969152:-1:exon
so has part: feature:2967583-2967665:-1:exon
so has part: feature:2964616-2964726:-1:exon
so has part: feature:2957864-2958029:-1:exon

position:2957864:-1
position: 2957864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3045714-3045820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3037711-3037849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032056-3032198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028053-3028170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004307-3004435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2999974-3000191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2991173-2991284:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2987025-2987099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2985878-2986017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2983024-2983177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2980042-2980123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2979092-2979169:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2978373-2978463:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2973595-2973687:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2969124-2969152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2967583-2967665:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2964616-2964726:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2957864-2958029:-1:exon

LOC116988735
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988735
product: uncharacterized LOC116988735, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033045597.1
SIO_010081: LOC116988735
subclass of: SO_0000673
so part of: LOC116988735
location: complement(join(2957902..2958029,2964616..2964726,2969124..2969152,2973595..2973687,2978373..2978463,2979092..2979169,2980042..2980123,2983024..2983177,2985878..2986017,2987025..2987099,2991173..2991284,2999974..3000191,3004307..3004435,3028053..3028170,3032056..3032198,3037711..3037849,3045714..3045820))
location: region:2957902-3045820:-1
so has part: feature:3045714-3045820:-1:exon
so has part: feature:3037711-3037849:-1:exon
so has part: feature:3032056-3032198:-1:exon
so has part: feature:3028053-3028170:-1:exon
so has part: feature:3004307-3004435:-1:exon
so has part: feature:2999974-3000191:-1:exon
so has part: feature:2991173-2991284:-1:exon
so has part: feature:2987025-2987099:-1:exon
so has part: feature:2985878-2986017:-1:exon
so has part: feature:2983024-2983177:-1:exon
so has part: feature:2980042-2980123:-1:exon
so has part: feature:2979092-2979169:-1:exon
so has part: feature:2978373-2978463:-1:exon
so has part: feature:2973595-2973687:-1:exon
so has part: feature:2969124-2969152:-1:exon
so has part: feature:2964616-2964726:-1:exon
so has part: feature:2957902-2958029:-1:exon

position:2957902:-1
position: 2957902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3045714-3045820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3037711-3037849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032056-3032198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028053-3028170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004307-3004435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2999974-3000191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2991173-2991284:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2987025-2987099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2985878-2986017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2983024-2983177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2980042-2980123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2979092-2979169:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2978373-2978463:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2973595-2973687:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2969124-2969152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2964616-2964726:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2957902-2958029:-1:exon

LOC116988735
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: LOC116988735
product: uncharacterized LOC116988735, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416053.1
SIO_010081: LOC116988735
so part of: LOC116988735
location: complement(join(2957978..2958029,2962895..2962983,2964616..2964726,2969124..2969152,2973595..2973687,2978373..2978463,2979092..2979169,2980042..2980123,2983024..2983177,2985878..2986017,2987025..2987099,2991173..2991284,2999974..3000191,3004307..3004435,3028053..3028170,3032056..3032198,3037711..3037849,3045714..3045820))
location: region:2957978-3045820:-1
so has part: feature:3045714-3045820:-1:exon
so has part: feature:3037711-3037849:-1:exon
so has part: feature:3032056-3032198:-1:exon
so has part: feature:3028053-3028170:-1:exon
so has part: feature:3004307-3004435:-1:exon
so has part: feature:2999974-3000191:-1:exon
so has part: feature:2991173-2991284:-1:exon
so has part: feature:2987025-2987099:-1:exon
so has part: feature:2985878-2986017:-1:exon
so has part: feature:2983024-2983177:-1:exon
so has part: feature:2980042-2980123:-1:exon
so has part: feature:2979092-2979169:-1:exon
so has part: feature:2978373-2978463:-1:exon
so has part: feature:2973595-2973687:-1:exon
so has part: feature:2969124-2969152:-1:exon
so has part: feature:2964616-2964726:-1:exon
so has part: feature:2962895-2962983:-1:exon
so has part: feature:2957978-2958029:-1:exon

position:2957978:-1
position: 2957978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3045714-3045820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3037711-3037849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032056-3032198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028053-3028170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004307-3004435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2999974-3000191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2991173-2991284:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2987025-2987099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2985878-2986017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2983024-2983177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2980042-2980123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2979092-2979169:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2978373-2978463:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2973595-2973687:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2969124-2969152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2964616-2964726:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2962895-2962983:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2957978-2958029:-1:exon

LOC116988735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116988735 isoform X5
translation: MATAPRQHTHTGRQMAASWLAEVREQVHLSQVWQEYSKELFDVVLQQLAEGHVDFFTDLSTSEKALFVDRAAKAVNGGSIYRALVSRINSALEEQFGKRLSYKMHESKSMRTRTEAFGSRIQDGVVSLLQKWPDMKSKLHILFNHSLPPDLRKLTWNLYLSNTKVRMEYLSWLSLNLAQSNTDKAIFLKCESLLSSEPTFKTLSETKYAAKIMSNVLSYYQRIQHSSDYLSEANYLLLVPLVQVSLAATTLSALLNVPSTQLVEEYVTFMEWWKRELVNQMPGSSADDNLFEGMANMLDEKDKEVSAIIQKIYTQQAGNQSRQDLLRGLQSLLNPVISTLFVGYLNMETLLYVWDQHIIGLGHPSYNCLPAFCLAFILLLREHLQICKTPGDVDAVLRSHAAELTSLQFQKVIKEHFYSNLYKSLTKQNTDVFMALDSDQEKVLPAWTHLFRNHLPYRSQPKERQQAREQRDAQHMQCLKEAKLTKLREDEEQSTKEKKLQSLLEESQRINQEQKISFEEKLRQERHLQYEMQRKAEEQVNQLQVEMRHVMQQRQFSTDAYSLTSFIPPPPASLESTRSSGIRKPGQSVPPEDLKITTPILTMNQHQPTGKGGHVTLDILHYLMHTTNSISTVWTPRG
SIO_010081: LOC116988735
subclass of: SO_0000673
so part of: LOC116988735
location: complement(join(2958001..2958029,2964616..2964726,2967583..2967665,2969124..2969152,2973595..2973687,2978373..2978463,2979092..2979169,2980042..2980123,2983024..2983177,2985878..2986017,2987025..2987099,2991173..2991284,2999974..3000191,3004307..3004435,3028053..3028170,3032056..3032198,3037711..3037849,3045714..3045806))
location: region:2958001-3045806:-1
so has part: feature:3045714-3045806:-1:exon
so has part: feature:3037711-3037849:-1:exon
so has part: feature:3032056-3032198:-1:exon
so has part: feature:3028053-3028170:-1:exon
so has part: feature:3004307-3004435:-1:exon
so has part: feature:2999974-3000191:-1:exon
so has part: feature:2991173-2991284:-1:exon
so has part: feature:2987025-2987099:-1:exon
so has part: feature:2985878-2986017:-1:exon
so has part: feature:2983024-2983177:-1:exon
so has part: feature:2980042-2980123:-1:exon
so has part: feature:2979092-2979169:-1:exon
so has part: feature:2978373-2978463:-1:exon
so has part: feature:2973595-2973687:-1:exon
so has part: feature:2969124-2969152:-1:exon
so has part: feature:2967583-2967665:-1:exon
so has part: feature:2964616-2964726:-1:exon
so has part: feature:2958001-2958029:-1:exon

XP_032901485.1
type: Protein
SIO_000068: ncbiprotein

position:2958001:-1
position: 2958001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3045714-3045806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3037711-3037849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032056-3032198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028053-3028170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004307-3004435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2999974-3000191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2991173-2991284:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2987025-2987099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2985878-2986017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2983024-2983177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2980042-2980123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2979092-2979169:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2978373-2978463:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2973595-2973687:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2969124-2969152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2967583-2967665:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2964616-2964726:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2958001-2958029:-1:exon

LOC116988735
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988735
product: uncharacterized LOC116988735, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033045596.1
SIO_010081: LOC116988735
subclass of: SO_0000673
so part of: LOC116988735
location: complement(join(2962066..2962077,2964616..2964726,2969124..2969152,2973595..2973687,2978373..2978463,2979092..2979169,2980042..2980123,2983024..2983177,2985878..2986017,2987025..2987099,2991173..2991284,2999974..3000191,3004307..3004435,3028053..3028170,3032056..3032198,3037711..3037849,3045714..3045820))
location: region:2962066-3045820:-1
so has part: feature:3045714-3045820:-1:exon
so has part: feature:3037711-3037849:-1:exon
so has part: feature:3032056-3032198:-1:exon
so has part: feature:3028053-3028170:-1:exon
so has part: feature:3004307-3004435:-1:exon
so has part: feature:2999974-3000191:-1:exon
so has part: feature:2991173-2991284:-1:exon
so has part: feature:2987025-2987099:-1:exon
so has part: feature:2985878-2986017:-1:exon
so has part: feature:2983024-2983177:-1:exon
so has part: feature:2980042-2980123:-1:exon
so has part: feature:2979092-2979169:-1:exon
so has part: feature:2978373-2978463:-1:exon
so has part: feature:2973595-2973687:-1:exon
so has part: feature:2969124-2969152:-1:exon
so has part: feature:2964616-2964726:-1:exon
so has part: feature:2962066-2962077:-1:exon

position:2962066:-1
position: 2962066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3045714-3045820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3037711-3037849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032056-3032198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028053-3028170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004307-3004435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2999974-3000191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2991173-2991284:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2987025-2987099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2985878-2986017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2983024-2983177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2980042-2980123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2979092-2979169:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2978373-2978463:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2973595-2973687:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2969124-2969152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2964616-2964726:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2962066-2962077:-1:exon

position:2962077:-1
position: 2962077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116988735 isoform X6
translation: MATAPRQHTHTGRQMAASWLAEVREQVHLSQVWQEYSKELFDVVLQQLAEGHVDFFTDLSTSEKALFVDRAAKAVNGGSIYRALVSRINSALEEQFGKRLSYKMHESKSMRTRTEAFGSRIQDGVVSLLQKWPDMKSKLHILFNHSLPPDLRKLTWNLYLSNTKVRMEYLSWLSLNLAQSNTDKAIFLKCESLLSSEPTFKTLSETKYAAKIMSNVLSYYQRIQHSSDYLSEANYLLLVPLVQVSLAATTLSALLNVPSTQLVEEYVTFMEWWKRELVNQMPGSSADDNLFEGMANMLDEKDKEVSAIIQKIYTQQAGNQSRQDLLRGLQSLLNPVISTLFVGYLNMETLLYVWDQHIIGLGHPSYNCLPAFCLAFILLLREHLQICKTPGDVDAVLRSHAAELTSLQFQKVIKEHFYSNLYKSLTKQNTDVFMALDSDQEKVLPAWTHLFRNHLPYRSQPKERQQAREQRDAQHMQCLKEAKLTKLREDEEQSTKEKKLQSLLEESQRINQEQKISFEEKLRQERHLQYEMQRKAEEQVNQLQVEMRHVMQQRQFSTDAYSLTRFKDHNAHLDYESTSTYRQRRPCHSGHSTLSDAHH
SIO_010081: LOC116988735
subclass of: SO_0000673
so part of: LOC116988735
location: complement(join(2964621..2964726,2969124..2969152,2973595..2973687,2978373..2978463,2979092..2979169,2980042..2980123,2983024..2983177,2985878..2986017,2987025..2987099,2991173..2991284,2999974..3000191,3004307..3004435,3028053..3028170,3032056..3032198,3037711..3037849,3045714..3045806))
location: region:2964621-3045806:-1
so has part: feature:3045714-3045806:-1:exon
so has part: feature:3037711-3037849:-1:exon
so has part: feature:3032056-3032198:-1:exon
so has part: feature:3028053-3028170:-1:exon
so has part: feature:3004307-3004435:-1:exon
so has part: feature:2999974-3000191:-1:exon
so has part: feature:2991173-2991284:-1:exon
so has part: feature:2987025-2987099:-1:exon
so has part: feature:2985878-2986017:-1:exon
so has part: feature:2983024-2983177:-1:exon
so has part: feature:2980042-2980123:-1:exon
so has part: feature:2979092-2979169:-1:exon
so has part: feature:2978373-2978463:-1:exon
so has part: feature:2973595-2973687:-1:exon
so has part: feature:2969124-2969152:-1:exon
so has part: feature:2964621-2964726:-1:exon

XP_032901487.1
type: Protein
SIO_000068: ncbiprotein

position:2964621:-1
position: 2964621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3045714-3045806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3037711-3037849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032056-3032198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028053-3028170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004307-3004435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2999974-3000191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2991173-2991284:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2987025-2987099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2985878-2986017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2983024-2983177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2980042-2980123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2979092-2979169:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2978373-2978463:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2973595-2973687:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2969124-2969152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2964621-2964726:-1:exon

LOC116988735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116988735 isoform X6
translation: MATAPRQHTHTGRQMAASWLAEVREQVHLSQVWQEYSKELFDVVLQQLAEGHVDFFTDLSTSEKALFVDRAAKAVNGGSIYRALVSRINSALEEQFGKRLSYKMHESKSMRTRTEAFGSRIQDGVVSLLQKWPDMKSKLHILFNHSLPPDLRKLTWNLYLSNTKVRMEYLSWLSLNLAQSNTDKAIFLKCESLLSSEPTFKTLSETKYAAKIMSNVLSYYQRIQHSSDYLSEANYLLLVPLVQVSLAATTLSALLNVPSTQLVEEYVTFMEWWKRELVNQMPGSSADDNLFEGMANMLDEKDKEVSAIIQKIYTQQAGNQSRQDLLRGLQSLLNPVISTLFVGYLNMETLLYVWDQHIIGLGHPSYNCLPAFCLAFILLLREHLQICKTPGDVDAVLRSHAAELTSLQFQKVIKEHFYSNLYKSLTKQNTDVFMALDSDQEKVLPAWTHLFRNHLPYRSQPKERQQAREQRDAQHMQCLKEAKLTKLREDEEQSTKEKKLQSLLEESQRINQEQKISFEEKLRQERHLQYEMQRKAEEQVNQLQVEMRHVMQQRQFSTDAYSLTRFKDHNAHLDYESTSTYRQRRPCHSGHSTLSDAHH
SIO_010081: LOC116988735
subclass of: SO_0000673
so part of: LOC116988735
location: complement(join(2964621..2964726,2969124..2969152,2973595..2973687,2978373..2978463,2979092..2979169,2980042..2980123,2983024..2983177,2985878..2986017,2987025..2987099,2991173..2991284,2999974..3000191,3004307..3004435,3028053..3028170,3032056..3032198,3037711..3037849,3045714..3045806))
location: region:2964621-3045806:-1
so has part: feature:3045714-3045806:-1:exon
so has part: feature:3037711-3037849:-1:exon
so has part: feature:3032056-3032198:-1:exon
so has part: feature:3028053-3028170:-1:exon
so has part: feature:3004307-3004435:-1:exon
so has part: feature:2999974-3000191:-1:exon
so has part: feature:2991173-2991284:-1:exon
so has part: feature:2987025-2987099:-1:exon
so has part: feature:2985878-2986017:-1:exon
so has part: feature:2983024-2983177:-1:exon
so has part: feature:2980042-2980123:-1:exon
so has part: feature:2979092-2979169:-1:exon
so has part: feature:2978373-2978463:-1:exon
so has part: feature:2973595-2973687:-1:exon
so has part: feature:2969124-2969152:-1:exon
so has part: feature:2964621-2964726:-1:exon

XP_032901488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3045714-3045806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3037711-3037849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3032056-3032198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028053-3028170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004307-3004435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2999974-3000191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2991173-2991284:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2987025-2987099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2985878-2986017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2983024-2983177:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2980042-2980123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2979092-2979169:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2978373-2978463:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2973595-2973687:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2969124-2969152:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2964621-2964726:-1:exon

itgae
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: itgae
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3056804..3173633
location: region:3056804-3173633:1
so has part: feature:3056804-3173633:1:exon
subclass of: SO_0000010

116988734
type: Gene
SIO_000068: ncbigene

position:3056804:1
position: 3056804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3173633:1
position: 3173633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3056804-3173633:1:exon

itgae
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: itgae
product: integrin subunit alpha E
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033045589.1
SIO_010081: itgae
subclass of: SO_0000673
so part of: itgae
location: join(3056804..3057101,3066699..3066816,3073747..3073850,3085873..3085940,3087878..3087992,3092205..3092321,3101994..3102109,3108103..3108257,3113120..3113273,3115426..3115567,3118331..3118407,3119455..3119587,3122981..3123123,3123504..3123644,3125108..3125311,3127462..3127592,3132239..3132381,3134593..3134750,3139857..3139985,3141838..3141911,3146046..3146187,3150500..3150604,3152288..3152367,3154737..3154817,3156435..3156501,3160573..3160659,3165042..3165134,3166495..3166602,3168765..3168869,3171297..3171407,3173295..3173633)
location: region:3056804-3173633:1
so has part: feature:3056804-3057101:1:exon
so has part: feature:3066699-3066816:1:exon
so has part: feature:3073747-3073850:1:exon
so has part: feature:3085873-3085940:1:exon
so has part: feature:3087878-3087992:1:exon
so has part: feature:3092205-3092321:1:exon
so has part: feature:3101994-3102109:1:exon
so has part: feature:3108103-3108257:1:exon
so has part: feature:3113120-3113273:1:exon
so has part: feature:3115426-3115567:1:exon
so has part: feature:3118331-3118407:1:exon
so has part: feature:3119455-3119587:1:exon
so has part: feature:3122981-3123123:1:exon
so has part: feature:3123504-3123644:1:exon
so has part: feature:3125108-3125311:1:exon
so has part: feature:3127462-3127592:1:exon
so has part: feature:3132239-3132381:1:exon
so has part: feature:3134593-3134750:1:exon
so has part: feature:3139857-3139985:1:exon
so has part: feature:3141838-3141911:1:exon
so has part: feature:3146046-3146187:1:exon
so has part: feature:3150500-3150604:1:exon
so has part: feature:3152288-3152367:1:exon
so has part: feature:3154737-3154817:1:exon
so has part: feature:3156435-3156501:1:exon
so has part: feature:3160573-3160659:1:exon
so has part: feature:3165042-3165134:1:exon
so has part: feature:3166495-3166602:1:exon
so has part: feature:3168765-3168869:1:exon
so has part: feature:3171297-3171407:1:exon
so has part: feature:3173295-3173633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3056804-3057101:1:exon

position:3057101:1
position: 3057101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3066699-3066816:1:exon

position:3066699:1
position: 3066699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3066816:1
position: 3066816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3073747-3073850:1:exon

position:3073747:1
position: 3073747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3073850:1
position: 3073850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3085873-3085940:1:exon

position:3085873:1
position: 3085873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3085940:1
position: 3085940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3087878-3087992:1:exon

position:3087878:1
position: 3087878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3087992:1
position: 3087992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3092205-3092321:1:exon

position:3092205:1
position: 3092205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3092321:1
position: 3092321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3101994-3102109:1:exon

position:3101994:1
position: 3101994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3102109:1
position: 3102109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3108103-3108257:1:exon

position:3108103:1
position: 3108103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3108257:1
position: 3108257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3113120-3113273:1:exon

position:3113120:1
position: 3113120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3113273:1
position: 3113273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3115426-3115567:1:exon

position:3115426:1
position: 3115426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3115567:1
position: 3115567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3118331-3118407:1:exon

position:3118331:1
position: 3118331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3118407:1
position: 3118407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3119455-3119587:1:exon

position:3119455:1
position: 3119455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3119587:1
position: 3119587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3122981-3123123:1:exon

position:3122981:1
position: 3122981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3123123:1
position: 3123123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3123504-3123644:1:exon

position:3123504:1
position: 3123504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3123644:1
position: 3123644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3125108-3125311:1:exon

position:3125108:1
position: 3125108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3125311:1
position: 3125311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3127462-3127592:1:exon

position:3127462:1
position: 3127462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3127592:1
position: 3127592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3132239-3132381:1:exon

position:3132239:1
position: 3132239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3132381:1
position: 3132381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3134593-3134750:1:exon

position:3134593:1
position: 3134593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3134750:1
position: 3134750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3139857-3139985:1:exon

position:3139857:1
position: 3139857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3139985:1
position: 3139985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3141838-3141911:1:exon

position:3141838:1
position: 3141838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141911:1
position: 3141911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3146046-3146187:1:exon

position:3146046:1
position: 3146046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3146187:1
position: 3146187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3150500-3150604:1:exon

position:3150500:1
position: 3150500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3150604:1
position: 3150604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3152288-3152367:1:exon

position:3152288:1
position: 3152288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3152367:1
position: 3152367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3154737-3154817:1:exon

position:3154737:1
position: 3154737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3154817:1
position: 3154817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3156435-3156501:1:exon

position:3156435:1
position: 3156435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3156501:1
position: 3156501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3160573-3160659:1:exon

position:3160573:1
position: 3160573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3160659:1
position: 3160659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3165042-3165134:1:exon

position:3165042:1
position: 3165042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3165134:1
position: 3165134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3166495-3166602:1:exon

position:3166495:1
position: 3166495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3166602:1
position: 3166602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3168765-3168869:1:exon

position:3168765:1
position: 3168765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3168869:1
position: 3168869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3171297-3171407:1:exon

position:3171297:1
position: 3171297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3171407:1
position: 3171407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3173295-3173633:1:exon

position:3173295:1
position: 3173295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

itgae
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: itgae
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-E
translation: MKRMIGTLFFLLFAPKALYTFNIDTKIKVVFQNHDNVLFGQKVVQYNHDKNSGILVSSPLYTKDNKSYGRMENCDLKSKQCNSIKLPETKSARRRPGFTMAANLLHSQFLLCRQQRIRLQKNIEDLNGICTVLSSNLQEKYTIETSSLGIVTQNNNNNNNNNNNNNNNNNNNSSSSIENEEDDDDFPGTEIAIVLDGSGSIDESDFRRAKDFIKNIAKNIGDKCPECTFALVQYSNDIETIFNLKQSKAMGSRIFQVIDEMPQFGQVTKTASAIQHVLDNIFNETQGSKRYAKQFIIVITDGDIFGDTMNITEVINSPKIAKVTRIAVGVGENFQRKNELKLIASDPDEKHLFKVDNYAALNNLLADLEKNIVGIEGTQGPNISAFHLELAQIGFSADYSSDGNILLGAVGAYDWTGGVMMYNINNGTTQFLNESTRTLSAAYGYLGYSVTGARGNNQQHLYIAGAPRRNQTGQVIVFEAGTPVKIKQYLSGHQLGSYFGSELCPLDINNDSVTDLLLVGAPFFHVRGEEGMVYVYHLNEEGIFDDEMILTGVGSASNARFGFAIVNIGDINKDSYNDVAIGAPLEEDHGGSIYIFNGKMDGIHKTYSQRIQGKDVMSGLQYFGQSIDGGSDVDGDGLLDITVGAKDNVVVLSSRPIINIEVNVTFSPKMVPLSFATFNEQKKTIQVSVCFTTLSKFGPLDLKNSFVNYTINLDKKQKNKRAMFTKSDATPVSLSDSVRISTAGCKNYLITLQHCTIDCVSAIDVEVNYTLHNIEEKDQPPSPVLNKVTKSLASFELQFQKDCGFDDICVSNLYMDCNFTNDFTWIVGKIREASLKIFLSNTGEDSYLTTMDLSYPKSFYFKEISKSLSSQHIGVKCTDQAASSSLSFLKCAISHPVFKKNSQAELTVSWDLDIAPFKEEFATISINVTNKNEVGDFIQWTHYIPTKHGLNVFLRPLNQISKVNIHDNDVNRAVIFHFQATVDNPYNAVIKLRISIPVKVQQLDILDSEHLKAQKNLKDCLEVRNIEKHKHSQKGKDKWDCDMEECECLYFECMLTASKQDIIVKANLIKDNLKQLIQEKADIVVSGSVVFDRNLYEESHDAEDQGHNVEIYVNVVNVPVFNAIPLVAGSTVGGILLLLLVIFILYKCGFFKRSYKDKIEETTEE
SIO_010081: itgae
subclass of: SO_0000673
so part of: itgae
location: join(3057062..3057101,3066699..3066816,3073747..3073850,3085873..3085940,3087878..3087992,3092205..3092321,3101994..3102109,3108103..3108257,3113120..3113273,3115426..3115567,3118331..3118407,3119455..3119587,3122981..3123123,3123504..3123644,3125108..3125311,3127462..3127592,3132239..3132381,3134593..3134750,3139857..3139985,3141838..3141911,3146046..3146187,3150500..3150604,3152288..3152367,3154737..3154817,3156435..3156501,3160573..3160659,3165042..3165134,3166495..3166602,3168765..3168869,3171297..3171407,3173295..3173351)
location: region:3057062-3173351:1
so has part: feature:3057062-3057101:1:exon
so has part: feature:3066699-3066816:1:exon
so has part: feature:3073747-3073850:1:exon
so has part: feature:3085873-3085940:1:exon
so has part: feature:3087878-3087992:1:exon
so has part: feature:3092205-3092321:1:exon
so has part: feature:3101994-3102109:1:exon
so has part: feature:3108103-3108257:1:exon
so has part: feature:3113120-3113273:1:exon
so has part: feature:3115426-3115567:1:exon
so has part: feature:3118331-3118407:1:exon
so has part: feature:3119455-3119587:1:exon
so has part: feature:3122981-3123123:1:exon
so has part: feature:3123504-3123644:1:exon
so has part: feature:3125108-3125311:1:exon
so has part: feature:3127462-3127592:1:exon
so has part: feature:3132239-3132381:1:exon
so has part: feature:3134593-3134750:1:exon
so has part: feature:3139857-3139985:1:exon
so has part: feature:3141838-3141911:1:exon
so has part: feature:3146046-3146187:1:exon
so has part: feature:3150500-3150604:1:exon
so has part: feature:3152288-3152367:1:exon
so has part: feature:3154737-3154817:1:exon
so has part: feature:3156435-3156501:1:exon
so has part: feature:3160573-3160659:1:exon
so has part: feature:3165042-3165134:1:exon
so has part: feature:3166495-3166602:1:exon
so has part: feature:3168765-3168869:1:exon
so has part: feature:3171297-3171407:1:exon
so has part: feature:3173295-3173351:1:exon

XP_032901480.1
type: Protein
SIO_000068: ncbiprotein

position:3057062:1
position: 3057062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3173351:1
position: 3173351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3057062-3057101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3066699-3066816:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3073747-3073850:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3085873-3085940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3087878-3087992:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3092205-3092321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3101994-3102109:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3108103-3108257:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3113120-3113273:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3115426-3115567:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3118331-3118407:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3119455-3119587:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3122981-3123123:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3123504-3123644:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3125108-3125311:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3127462-3127592:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3132239-3132381:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3134593-3134750:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3139857-3139985:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3141838-3141911:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3146046-3146187:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3150500-3150604:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3152288-3152367:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3154737-3154817:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3156435-3156501:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3160573-3160659:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3165042-3165134:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3166495-3166602:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3168765-3168869:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3171297-3171407:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3173295-3173351:1:exon

hnf1b
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: hnf1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3273573..3408884)
location: region:3273573-3408884:-1
so has part: feature:3273573-3408884:-1:exon
subclass of: SO_0000010

116988737
type: Gene
SIO_000068: ncbigene

position:3273573:-1
position: 3273573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3408884:-1
position: 3408884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3273573-3408884:-1:exon

hnf1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hnf1b
product: HNF1 homeobox B, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033045603.1
SIO_010081: hnf1b
subclass of: SO_0000673
so part of: hnf1b
location: complement(join(3273573..3274886,3302352..3302470,3311671..3311865,3314552..3314693,3317946..3318106,3385251..3385480,3393591..3393777,3403166..3403365,3408358..3408884))
location: region:3273573-3408884:-1
so has part: feature:3408358-3408884:-1:exon
so has part: feature:3403166-3403365:-1:exon
so has part: feature:3393591-3393777:-1:exon
so has part: feature:3385251-3385480:-1:exon
so has part: feature:3317946-3318106:-1:exon
so has part: feature:3314552-3314693:-1:exon
so has part: feature:3311671-3311865:-1:exon
so has part: feature:3302352-3302470:-1:exon
so has part: feature:3273573-3274886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3408358-3408884:-1:exon

position:3408358:-1
position: 3408358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3403166-3403365:-1:exon

position:3403166:-1
position: 3403166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3403365:-1
position: 3403365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3393591-3393777:-1:exon

position:3393591:-1
position: 3393591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3393777:-1
position: 3393777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3385251-3385480:-1:exon

position:3385251:-1
position: 3385251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3385480:-1
position: 3385480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3317946-3318106:-1:exon

position:3317946:-1
position: 3317946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3318106:-1
position: 3318106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3314552-3314693:-1:exon

position:3314552:-1
position: 3314552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3314693:-1
position: 3314693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3311671-3311865:-1:exon

position:3311671:-1
position: 3311671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3311865:-1
position: 3311865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3302352-3302470:-1:exon

position:3302352:-1
position: 3302352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3302470:-1
position: 3302470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3273573-3274886:-1:exon

position:3274886:-1
position: 3274886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hnf1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hnf1b
product: HNF1 homeobox B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033045602.1
SIO_010081: hnf1b
subclass of: SO_0000673
so part of: hnf1b
location: complement(join(3273573..3274886,3302352..3302470,3311671..3311865,3314552..3314693,3317946..3318109,3385251..3385480,3393591..3393777,3403166..3403365,3408358..3408884))
location: region:3273573-3408884:-1
so has part: feature:3408358-3408884:-1:exon
so has part: feature:3403166-3403365:-1:exon
so has part: feature:3393591-3393777:-1:exon
so has part: feature:3385251-3385480:-1:exon
so has part: feature:3317946-3318109:-1:exon
so has part: feature:3314552-3314693:-1:exon
so has part: feature:3311671-3311865:-1:exon
so has part: feature:3302352-3302470:-1:exon
so has part: feature:3273573-3274886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3408358-3408884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3403166-3403365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3393591-3393777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385251-3385480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3317946-3318109:-1:exon

position:3318109:-1
position: 3318109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3314552-3314693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3311671-3311865:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302352-3302470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3273573-3274886:-1:exon

hnf1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hnf1b
product: HNF1 homeobox B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033045599.1
SIO_010081: hnf1b
subclass of: SO_0000673
so part of: hnf1b
location: complement(join(3273573..3274886,3302352..3302470,3311671..3311865,3314552..3314693,3317946..3318106,3323291..3323410,3385251..3385480,3393591..3393777,3403166..3403365,3408358..3408884))
location: region:3273573-3408884:-1
so has part: feature:3408358-3408884:-1:exon
so has part: feature:3403166-3403365:-1:exon
so has part: feature:3393591-3393777:-1:exon
so has part: feature:3385251-3385480:-1:exon
so has part: feature:3323291-3323410:-1:exon
so has part: feature:3317946-3318106:-1:exon
so has part: feature:3314552-3314693:-1:exon
so has part: feature:3311671-3311865:-1:exon
so has part: feature:3302352-3302470:-1:exon
so has part: feature:3273573-3274886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3408358-3408884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3403166-3403365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3393591-3393777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385251-3385480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3323291-3323410:-1:exon

position:3323291:-1
position: 3323291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3323410:-1
position: 3323410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3317946-3318106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314552-3314693:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3311671-3311865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3302352-3302470:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3273573-3274886:-1:exon

hnf1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hnf1b
product: HNF1 homeobox B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033045601.1
SIO_010081: hnf1b
subclass of: SO_0000673
so part of: hnf1b
location: complement(join(3273573..3274886,3302352..3302470,3311671..3311865,3314552..3314693,3317946..3318106,3385251..3385480,3393591..3393858,3403166..3403365,3408358..3408884))
location: region:3273573-3408884:-1
so has part: feature:3408358-3408884:-1:exon
so has part: feature:3403166-3403365:-1:exon
so has part: feature:3393591-3393858:-1:exon
so has part: feature:3385251-3385480:-1:exon
so has part: feature:3317946-3318106:-1:exon
so has part: feature:3314552-3314693:-1:exon
so has part: feature:3311671-3311865:-1:exon
so has part: feature:3302352-3302470:-1:exon
so has part: feature:3273573-3274886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3408358-3408884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3403166-3403365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3393591-3393858:-1:exon

position:3393858:-1
position: 3393858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3385251-3385480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3317946-3318106:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3314552-3314693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3311671-3311865:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302352-3302470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3273573-3274886:-1:exon

hnf1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hnf1b
product: HNF1 homeobox B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033045600.1
SIO_010081: hnf1b
subclass of: SO_0000673
so part of: hnf1b
location: complement(join(3273573..3274886,3302352..3302470,3311671..3311865,3314552..3314693,3317946..3318109,3385251..3385480,3393591..3393858,3403166..3403365,3408358..3408884))
location: region:3273573-3408884:-1
so has part: feature:3408358-3408884:-1:exon
so has part: feature:3403166-3403365:-1:exon
so has part: feature:3393591-3393858:-1:exon
so has part: feature:3385251-3385480:-1:exon
so has part: feature:3317946-3318109:-1:exon
so has part: feature:3314552-3314693:-1:exon
so has part: feature:3311671-3311865:-1:exon
so has part: feature:3302352-3302470:-1:exon
so has part: feature:3273573-3274886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3408358-3408884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3403166-3403365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3393591-3393858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385251-3385480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3317946-3318109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3314552-3314693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3311671-3311865:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302352-3302470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3273573-3274886:-1:exon

hnf1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hnf1b
product: HNF1 homeobox B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033045598.1
SIO_010081: hnf1b
subclass of: SO_0000673
so part of: hnf1b
location: complement(join(3273573..3274886,3302352..3302470,3311671..3311865,3314552..3314693,3317946..3318106,3323291..3323410,3385251..3385480,3393591..3393858,3403166..3403365,3408358..3408884))
location: region:3273573-3408884:-1
so has part: feature:3408358-3408884:-1:exon
so has part: feature:3403166-3403365:-1:exon
so has part: feature:3393591-3393858:-1:exon
so has part: feature:3385251-3385480:-1:exon
so has part: feature:3323291-3323410:-1:exon
so has part: feature:3317946-3318106:-1:exon
so has part: feature:3314552-3314693:-1:exon
so has part: feature:3311671-3311865:-1:exon
so has part: feature:3302352-3302470:-1:exon
so has part: feature:3273573-3274886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3408358-3408884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3403166-3403365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3393591-3393858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385251-3385480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3323291-3323410:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3317946-3318106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314552-3314693:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3311671-3311865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3302352-3302470:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3273573-3274886:-1:exon

hnf1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hnf1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte nuclear factor 1-beta isoform X6
translation: MVSKLTSLQQELLSALLSSGVSKDVLIQALEDLEPSPSFEVKLENLPASPLKINGPGSEAKAVFHTLTNGHGKGKLSGDEGSEDGEEYDTPQIIKELESLNTEEAAEQRAEVDRMLREDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKNQKRAALYTWYIRKQQEIQRQFNQQDQASGQAEEVGTEPANKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECIQRGVSPSKAQGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSVQTHSMNPLLSHSSPHHPPNSSPSSKHGVRYGQQGVNEAPSSTAISHHGNSAMVTSQTVLQQVSPANLDPGHNLLSPDGKMITAVGGPLPPVSTLTNIHSLSQTQHHNHQQTQNLIINPLSGVMAIAQSISTSQGQSVPVINSVTAGSLAALQPVQFSQPLHSPHQQPIMQQAQAHLSQQPFMATVTQLQNSHMYAHKPDPPQYSHTARFPSAMVVADTGSISALASMSSSKQCPLQAW
SIO_010081: hnf1b
subclass of: SO_0000673
so part of: hnf1b
location: complement(join(3274866..3274886,3302352..3302470,3311671..3311865,3314552..3314693,3317946..3318106,3385251..3385480,3393591..3393777,3403166..3403365,3408358..3408707))
location: region:3274866-3408707:-1
so has part: feature:3408358-3408707:-1:exon
so has part: feature:3403166-3403365:-1:exon
so has part: feature:3393591-3393777:-1:exon
so has part: feature:3385251-3385480:-1:exon
so has part: feature:3317946-3318106:-1:exon
so has part: feature:3314552-3314693:-1:exon
so has part: feature:3311671-3311865:-1:exon
so has part: feature:3302352-3302470:-1:exon
so has part: feature:3274866-3274886:-1:exon

XP_032901494.1
type: Protein
SIO_000068: ncbiprotein

position:3274866:-1
position: 3274866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3408707:-1
position: 3408707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3408358-3408707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3403166-3403365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3393591-3393777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385251-3385480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3317946-3318106:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3314552-3314693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3311671-3311865:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302352-3302470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3274866-3274886:-1:exon

hnf1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hnf1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte nuclear factor 1-beta isoform X5
translation: MVSKLTSLQQELLSALLSSGVSKDVLIQALEDLEPSPSFEVKLENLPASPLKINGPGSEAKAVFHTLTNGHGKGKLSGDEGSEDGEEYDTPQIIKELESLNTEEAAEQRAEVDRMLREDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKNQKRAALYTWYIRKQQEIQRQFNQQDQASGQAEEVGTEPANKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECIQRGVSPSKAQGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSVQTHSMNPLLSHSSPHHPPNSSPSSKHAGVRYGQQGVNEAPSSTAISHHGNSAMVTSQTVLQQVSPANLDPGHNLLSPDGKMITAVGGPLPPVSTLTNIHSLSQTQHHNHQQTQNLIINPLSGVMAIAQSISTSQGQSVPVINSVTAGSLAALQPVQFSQPLHSPHQQPIMQQAQAHLSQQPFMATVTQLQNSHMYAHKPDPPQYSHTARFPSAMVVADTGSISALASMSSSKQCPLQAW
SIO_010081: hnf1b
subclass of: SO_0000673
so part of: hnf1b
location: complement(join(3274866..3274886,3302352..3302470,3311671..3311865,3314552..3314693,3317946..3318109,3385251..3385480,3393591..3393777,3403166..3403365,3408358..3408707))
location: region:3274866-3408707:-1
so has part: feature:3408358-3408707:-1:exon
so has part: feature:3403166-3403365:-1:exon
so has part: feature:3393591-3393777:-1:exon
so has part: feature:3385251-3385480:-1:exon
so has part: feature:3317946-3318109:-1:exon
so has part: feature:3314552-3314693:-1:exon
so has part: feature:3311671-3311865:-1:exon
so has part: feature:3302352-3302470:-1:exon
so has part: feature:3274866-3274886:-1:exon

XP_032901493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3408358-3408707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3403166-3403365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3393591-3393777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385251-3385480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3317946-3318109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3314552-3314693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3311671-3311865:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302352-3302470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3274866-3274886:-1:exon

hnf1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hnf1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte nuclear factor 1-beta isoform X2
translation: MVSKLTSLQQELLSALLSSGVSKDVLIQALEDLEPSPSFEVKLENLPASPLKINGPGSEAKAVFHTLTNGHGKGKLSGDEGSEDGEEYDTPQIIKELESLNTEEAAEQRAEVDRMLREDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKNQKRAALYTWYIRKQQEIQRQFNQQDQASGQAEEVGTEPANKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECIQRGVSPSKAQGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSVQTHSMNPLLSHSSPHHPPNSSPSSKHGHPLPGIFLHEGSQGALGYDHLHNHQCPTMASWQEMLFSQGVRYGQQGVNEAPSSTAISHHGNSAMVTSQTVLQQVSPANLDPGHNLLSPDGKMITAVGGPLPPVSTLTNIHSLSQTQHHNHQQTQNLIINPLSGVMAIAQSISTSQGQSVPVINSVTAGSLAALQPVQFSQPLHSPHQQPIMQQAQAHLSQQPFMATVTQLQNSHMYAHKPDPPQYSHTARFPSAMVVADTGSISALASMSSSKQCPLQAW
SIO_010081: hnf1b
subclass of: SO_0000673
so part of: hnf1b
location: complement(join(3274866..3274886,3302352..3302470,3311671..3311865,3314552..3314693,3317946..3318106,3323291..3323410,3385251..3385480,3393591..3393777,3403166..3403365,3408358..3408707))
location: region:3274866-3408707:-1
so has part: feature:3408358-3408707:-1:exon
so has part: feature:3403166-3403365:-1:exon
so has part: feature:3393591-3393777:-1:exon
so has part: feature:3385251-3385480:-1:exon
so has part: feature:3323291-3323410:-1:exon
so has part: feature:3317946-3318106:-1:exon
so has part: feature:3314552-3314693:-1:exon
so has part: feature:3311671-3311865:-1:exon
so has part: feature:3302352-3302470:-1:exon
so has part: feature:3274866-3274886:-1:exon

XP_032901490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3408358-3408707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3403166-3403365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3393591-3393777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385251-3385480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3323291-3323410:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3317946-3318106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314552-3314693:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3311671-3311865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3302352-3302470:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3274866-3274886:-1:exon

hnf1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hnf1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte nuclear factor 1-beta isoform X4
translation: MVSKLTSLQQELLSALLSSGVSKDVLIQALEDLEPSPSFEVKLENLPASPLKINGPGSEAKAVFHTLTNGHGKGKLSGDEGSEDGEEYDTPQIIKELESLNTEEAAEQRAEVDRMLREDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKNQKRAALYTWYIRKQQEIQRQFNQTIQNTGNNMTDKSRPDQLLFLFPEFNQQDQASGQAEEVGTEPANKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECIQRGVSPSKAQGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSVQTHSMNPLLSHSSPHHPPNSSPSSKHGVRYGQQGVNEAPSSTAISHHGNSAMVTSQTVLQQVSPANLDPGHNLLSPDGKMITAVGGPLPPVSTLTNIHSLSQTQHHNHQQTQNLIINPLSGVMAIAQSISTSQGQSVPVINSVTAGSLAALQPVQFSQPLHSPHQQPIMQQAQAHLSQQPFMATVTQLQNSHMYAHKPDPPQYSHTARFPSAMVVADTGSISALASMSSSKQCPLQAW
SIO_010081: hnf1b
subclass of: SO_0000673
so part of: hnf1b
location: complement(join(3274866..3274886,3302352..3302470,3311671..3311865,3314552..3314693,3317946..3318106,3385251..3385480,3393591..3393858,3403166..3403365,3408358..3408707))
location: region:3274866-3408707:-1
so has part: feature:3408358-3408707:-1:exon
so has part: feature:3403166-3403365:-1:exon
so has part: feature:3393591-3393858:-1:exon
so has part: feature:3385251-3385480:-1:exon
so has part: feature:3317946-3318106:-1:exon
so has part: feature:3314552-3314693:-1:exon
so has part: feature:3311671-3311865:-1:exon
so has part: feature:3302352-3302470:-1:exon
so has part: feature:3274866-3274886:-1:exon

XP_032901492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3408358-3408707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3403166-3403365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3393591-3393858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385251-3385480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3317946-3318106:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3314552-3314693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3311671-3311865:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302352-3302470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3274866-3274886:-1:exon

hnf1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hnf1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte nuclear factor 1-beta isoform X3
translation: MVSKLTSLQQELLSALLSSGVSKDVLIQALEDLEPSPSFEVKLENLPASPLKINGPGSEAKAVFHTLTNGHGKGKLSGDEGSEDGEEYDTPQIIKELESLNTEEAAEQRAEVDRMLREDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKNQKRAALYTWYIRKQQEIQRQFNQTIQNTGNNMTDKSRPDQLLFLFPEFNQQDQASGQAEEVGTEPANKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECIQRGVSPSKAQGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSVQTHSMNPLLSHSSPHHPPNSSPSSKHAGVRYGQQGVNEAPSSTAISHHGNSAMVTSQTVLQQVSPANLDPGHNLLSPDGKMITAVGGPLPPVSTLTNIHSLSQTQHHNHQQTQNLIINPLSGVMAIAQSISTSQGQSVPVINSVTAGSLAALQPVQFSQPLHSPHQQPIMQQAQAHLSQQPFMATVTQLQNSHMYAHKPDPPQYSHTARFPSAMVVADTGSISALASMSSSKQCPLQAW
SIO_010081: hnf1b
subclass of: SO_0000673
so part of: hnf1b
location: complement(join(3274866..3274886,3302352..3302470,3311671..3311865,3314552..3314693,3317946..3318109,3385251..3385480,3393591..3393858,3403166..3403365,3408358..3408707))
location: region:3274866-3408707:-1
so has part: feature:3408358-3408707:-1:exon
so has part: feature:3403166-3403365:-1:exon
so has part: feature:3393591-3393858:-1:exon
so has part: feature:3385251-3385480:-1:exon
so has part: feature:3317946-3318109:-1:exon
so has part: feature:3314552-3314693:-1:exon
so has part: feature:3311671-3311865:-1:exon
so has part: feature:3302352-3302470:-1:exon
so has part: feature:3274866-3274886:-1:exon

XP_032901491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3408358-3408707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3403166-3403365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3393591-3393858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385251-3385480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3317946-3318109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3314552-3314693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3311671-3311865:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3302352-3302470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3274866-3274886:-1:exon

hnf1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hnf1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte nuclear factor 1-beta isoform X1
translation: MVSKLTSLQQELLSALLSSGVSKDVLIQALEDLEPSPSFEVKLENLPASPLKINGPGSEAKAVFHTLTNGHGKGKLSGDEGSEDGEEYDTPQIIKELESLNTEEAAEQRAEVDRMLREDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKNQKRAALYTWYIRKQQEIQRQFNQTIQNTGNNMTDKSRPDQLLFLFPEFNQQDQASGQAEEVGTEPANKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECIQRGVSPSKAQGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSVQTHSMNPLLSHSSPHHPPNSSPSSKHGHPLPGIFLHEGSQGALGYDHLHNHQCPTMASWQEMLFSQGVRYGQQGVNEAPSSTAISHHGNSAMVTSQTVLQQVSPANLDPGHNLLSPDGKMITAVGGPLPPVSTLTNIHSLSQTQHHNHQQTQNLIINPLSGVMAIAQSISTSQGQSVPVINSVTAGSLAALQPVQFSQPLHSPHQQPIMQQAQAHLSQQPFMATVTQLQNSHMYAHKPDPPQYSHTARFPSAMVVADTGSISALASMSSSKQCPLQAW
SIO_010081: hnf1b
subclass of: SO_0000673
so part of: hnf1b
location: complement(join(3274866..3274886,3302352..3302470,3311671..3311865,3314552..3314693,3317946..3318106,3323291..3323410,3385251..3385480,3393591..3393858,3403166..3403365,3408358..3408707))
location: region:3274866-3408707:-1
so has part: feature:3408358-3408707:-1:exon
so has part: feature:3403166-3403365:-1:exon
so has part: feature:3393591-3393858:-1:exon
so has part: feature:3385251-3385480:-1:exon
so has part: feature:3323291-3323410:-1:exon
so has part: feature:3317946-3318106:-1:exon
so has part: feature:3314552-3314693:-1:exon
so has part: feature:3311671-3311865:-1:exon
so has part: feature:3302352-3302470:-1:exon
so has part: feature:3274866-3274886:-1:exon

XP_032901489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3408358-3408707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3403166-3403365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3393591-3393858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3385251-3385480:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3323291-3323410:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3317946-3318106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3314552-3314693:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3311671-3311865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3302352-3302470:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3274866-3274886:-1:exon

LOC116988738
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3334647..3344823)
location: region:3334647-3344823:-1
so has part: feature:3334647-3344823:-1:exon
subclass of: SO_0000011

116988738
type: Gene
SIO_000068: ncbigene

position:3334647:-1
position: 3334647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3344823:-1
position: 3344823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3334647-3344823:-1:exon

LOC116988738
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988738
product: uncharacterized LOC116988738
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004416054.1
SIO_010081: LOC116988738
subclass of: SO_0000673
so part of: LOC116988738
location: complement(join(3334647..3334660,3342113..3342117,3344721..3344823))
location: region:3334647-3344823:-1
so has part: feature:3344721-3344823:-1:exon
so has part: feature:3342113-3342117:-1:exon
so has part: feature:3334647-3334660:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3344721-3344823:-1:exon

position:3344721:-1
position: 3344721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3342113-3342117:-1:exon

position:3342113:-1
position: 3342113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3342117:-1
position: 3342117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3334647-3334660:-1:exon

position:3334660:-1
position: 3334660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

heatr6
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: heatr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3593402..3728372)
location: region:3593402-3728372:-1
so has part: feature:3593402-3728372:-1:exon
subclass of: SO_0000010

116988739
type: Gene
SIO_000068: ncbigene

position:3593402:-1
position: 3593402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3728372:-1
position: 3728372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3593402-3728372:-1:exon

heatr6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: heatr6
product: HEAT repeat containing 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033045606.1
SIO_010081: heatr6
subclass of: SO_0000673
so part of: heatr6
location: complement(join(3593402..3598323,3604940..3605144,3609186..3609282,3612887..3613011,3617622..3617744,3618411..3618545,3623890..3623976,3627544..3627666,3631930..3632291,3633478..3633577,3634894..3635100,3642959..3643136,3651579..3651868,3656965..3657105,3660291..3660392,3666997..3667111,3676504..3676619,3679315..3679455,3687234..3687293,3728169..3728372))
location: region:3593402-3728372:-1
so has part: feature:3728169-3728372:-1:exon
so has part: feature:3687234-3687293:-1:exon
so has part: feature:3679315-3679455:-1:exon
so has part: feature:3676504-3676619:-1:exon
so has part: feature:3666997-3667111:-1:exon
so has part: feature:3660291-3660392:-1:exon
so has part: feature:3656965-3657105:-1:exon
so has part: feature:3651579-3651868:-1:exon
so has part: feature:3642959-3643136:-1:exon
so has part: feature:3634894-3635100:-1:exon
so has part: feature:3633478-3633577:-1:exon
so has part: feature:3631930-3632291:-1:exon
so has part: feature:3627544-3627666:-1:exon
so has part: feature:3623890-3623976:-1:exon
so has part: feature:3618411-3618545:-1:exon
so has part: feature:3617622-3617744:-1:exon
so has part: feature:3612887-3613011:-1:exon
so has part: feature:3609186-3609282:-1:exon
so has part: feature:3604940-3605144:-1:exon
so has part: feature:3593402-3598323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3728169-3728372:-1:exon

position:3728169:-1
position: 3728169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3687234-3687293:-1:exon

position:3687234:-1
position: 3687234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3687293:-1
position: 3687293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3679315-3679455:-1:exon

position:3679315:-1
position: 3679315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3679455:-1
position: 3679455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3676504-3676619:-1:exon

position:3676504:-1
position: 3676504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3676619:-1
position: 3676619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3666997-3667111:-1:exon

position:3666997:-1
position: 3666997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3667111:-1
position: 3667111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3660291-3660392:-1:exon

position:3660291:-1
position: 3660291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3660392:-1
position: 3660392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3656965-3657105:-1:exon

position:3656965:-1
position: 3656965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3657105:-1
position: 3657105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3651579-3651868:-1:exon

position:3651579:-1
position: 3651579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3651868:-1
position: 3651868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3642959-3643136:-1:exon

position:3642959:-1
position: 3642959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3643136:-1
position: 3643136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3634894-3635100:-1:exon

position:3634894:-1
position: 3634894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3635100:-1
position: 3635100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3633478-3633577:-1:exon

position:3633478:-1
position: 3633478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3633577:-1
position: 3633577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3631930-3632291:-1:exon

position:3631930:-1
position: 3631930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3632291:-1
position: 3632291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3627544-3627666:-1:exon

position:3627544:-1
position: 3627544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3627666:-1
position: 3627666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3623890-3623976:-1:exon

position:3623890:-1
position: 3623890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3623976:-1
position: 3623976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3618411-3618545:-1:exon

position:3618411:-1
position: 3618411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3618545:-1
position: 3618545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3617622-3617744:-1:exon

position:3617622:-1
position: 3617622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3617744:-1
position: 3617744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3612887-3613011:-1:exon

position:3612887:-1
position: 3612887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3613011:-1
position: 3613011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3609186-3609282:-1:exon

position:3609186:-1
position: 3609186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3609282:-1
position: 3609282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3604940-3605144:-1:exon

position:3604940:-1
position: 3604940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3605144:-1
position: 3605144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3593402-3598323:-1:exon

position:3598323:-1
position: 3598323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

heatr6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: heatr6
product: HEAT repeat containing 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033045605.1
SIO_010081: heatr6
subclass of: SO_0000673
so part of: heatr6
location: complement(join(3593402..3598323,3604940..3605144,3609186..3609282,3612887..3613011,3617622..3617744,3618411..3618545,3623890..3623976,3627544..3627666,3631930..3632291,3633478..3633577,3634894..3635100,3642959..3643136,3651579..3651868,3656965..3657105,3660291..3660392,3666997..3667111,3676504..3676619,3679315..3679455,3687186..3687293,3728169..3728372))
location: region:3593402-3728372:-1
so has part: feature:3728169-3728372:-1:exon
so has part: feature:3687186-3687293:-1:exon
so has part: feature:3679315-3679455:-1:exon
so has part: feature:3676504-3676619:-1:exon
so has part: feature:3666997-3667111:-1:exon
so has part: feature:3660291-3660392:-1:exon
so has part: feature:3656965-3657105:-1:exon
so has part: feature:3651579-3651868:-1:exon
so has part: feature:3642959-3643136:-1:exon
so has part: feature:3634894-3635100:-1:exon
so has part: feature:3633478-3633577:-1:exon
so has part: feature:3631930-3632291:-1:exon
so has part: feature:3627544-3627666:-1:exon
so has part: feature:3623890-3623976:-1:exon
so has part: feature:3618411-3618545:-1:exon
so has part: feature:3617622-3617744:-1:exon
so has part: feature:3612887-3613011:-1:exon
so has part: feature:3609186-3609282:-1:exon
so has part: feature:3604940-3605144:-1:exon
so has part: feature:3593402-3598323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3728169-3728372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3687186-3687293:-1:exon

position:3687186:-1
position: 3687186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3679315-3679455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3676504-3676619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3666997-3667111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3660291-3660392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3656965-3657105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3651579-3651868:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3642959-3643136:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3634894-3635100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3633478-3633577:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3631930-3632291:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3627544-3627666:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3623890-3623976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3618411-3618545:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3617622-3617744:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3612887-3613011:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3609186-3609282:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3604940-3605144:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3593402-3598323:-1:exon

heatr6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: heatr6
product: HEAT repeat containing 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033045607.1
SIO_010081: heatr6
subclass of: SO_0000673
so part of: heatr6
location: complement(join(3593402..3598323,3604940..3605144,3609186..3609282,3612887..3613011,3617622..3617744,3618411..3618545,3623890..3623976,3627544..3627666,3631930..3632291,3633478..3633577,3634894..3635100,3642959..3643136,3651579..3651868,3656965..3657105,3660291..3660392,3666997..3667111,3676504..3676619,3679315..3679455,3687186..3687293,3702497..3702517))
location: region:3593402-3702517:-1
so has part: feature:3702497-3702517:-1:exon
so has part: feature:3687186-3687293:-1:exon
so has part: feature:3679315-3679455:-1:exon
so has part: feature:3676504-3676619:-1:exon
so has part: feature:3666997-3667111:-1:exon
so has part: feature:3660291-3660392:-1:exon
so has part: feature:3656965-3657105:-1:exon
so has part: feature:3651579-3651868:-1:exon
so has part: feature:3642959-3643136:-1:exon
so has part: feature:3634894-3635100:-1:exon
so has part: feature:3633478-3633577:-1:exon
so has part: feature:3631930-3632291:-1:exon
so has part: feature:3627544-3627666:-1:exon
so has part: feature:3623890-3623976:-1:exon
so has part: feature:3618411-3618545:-1:exon
so has part: feature:3617622-3617744:-1:exon
so has part: feature:3612887-3613011:-1:exon
so has part: feature:3609186-3609282:-1:exon
so has part: feature:3604940-3605144:-1:exon
so has part: feature:3593402-3598323:-1:exon

position:3702517:-1
position: 3702517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3702497-3702517:-1:exon

position:3702497:-1
position: 3702497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3687186-3687293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3679315-3679455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3676504-3676619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3666997-3667111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3660291-3660392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3656965-3657105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3651579-3651868:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3642959-3643136:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3634894-3635100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3633478-3633577:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3631930-3632291:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3627544-3627666:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3623890-3623976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3618411-3618545:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3617622-3617744:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3612887-3613011:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3609186-3609282:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3604940-3605144:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3593402-3598323:-1:exon

heatr6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: heatr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HEAT repeat-containing protein 6 isoform X2
translation: MAAERGHGEPAAAAAAVTTHPSSDFNRFRNKLFTIRASESENFKTEVNLVFDQLISENYLSHSSISREDVCSLLVQACRLVQLNQEHLVTVDEQSLELLLSYCIRALQQCNSWTHVEILQAVAALVYGNGPRCQKFLPDLLGKNGILLQLSAPTESDVDLRRAAVYCMANLCLSVPGQAYLEEQYKVVSLQTFLNVLRNPKTPDVDDVTVCKLLQNALKGIHSILNAGRINLTQADQLGTLLAALKTYMFYGFPGVNIEVPVVLYPAPLPQYEGSSSIKDQTGSATNTSKQVGHKKKKSRSKNKKEQPEDEKEDHSNKAQPEPLQQPENGTPRGENNTLSLQGPKNYTDNIVPSLDGKETSNSFYPAWKKINSSDSEYSDTEGGIQSKLRSLQGKVRQGALACFLSTIKSIEKKVLHGYWSAFIADVPGIGSPQAVSLMTIALKDPSPKVRAGSLQVLSAILEGSKHFLSVAEDTNDHRRAFTPFSATLASSIRELHRCLLLALVAESSPQTLTQIIKCLANLVTNVPYNRLKPGLLTRVWNQIKPHTCFRDVNVRVCSLTLLGAILSVQAPLPEVQLLLQQPSSPGLSSSGSGTPHRLSDAESWRKPPQGANREREKEIPESPVQELCWLIQLCVSIITVPKYEPYSDSDTGTGTASNSYEASPVRVEALQVLALLVKGYFTMAQTSLLELEEVACLCMEEQDPSIQLHGARLVEEIGSGIVQQHKPDSPTPQCQRVPVTQVVNFWSRMLNGPLPGALQNDEHSTLQTSTCDAISSILPEAFNSLPNENQILCITVLLGLNHSEHPLVKAAAVRALGVYILFPSLRQDVMFVADTANAILTSLDDKSLNVRTKAAWSLANLTDTLIANMETMGRDFQEELSDVLLLKMLKSATHASHDKDKVKSNAVRALGNLLHFLQPHHISKTQFKPGIEESIQALIRTVLSEATMKVRWNACYALGNMFKNPAIPLDSASWAPQAFCALTSVVKTCKNFKVRIKSAMALAIPDSRQRYGDTKQFCEIWSALVLALEKSEETEDFLEFKYCASLRTQICQTLLHLLRLVSAEDMPCIHKTLSVKGNLMRVFVQRFLTSAVEADETMTQSDPQDRARMLQEAVQNINSLQDVALDEREMIVKYLDDIFKHCVEPMQTETGPKMTQA
SIO_010081: heatr6
subclass of: SO_0000673
so part of: heatr6
location: complement(join(3597758..3598323,3604940..3605144,3609186..3609282,3612887..3613011,3617622..3617744,3618411..3618545,3623890..3623976,3627544..3627666,3631930..3632291,3633478..3633577,3634894..3635100,3642959..3643136,3651579..3651868,3656965..3657105,3660291..3660392,3666997..3667111,3676504..3676619,3679315..3679455,3687234..3687293,3728169..3728372))
location: region:3597758-3728372:-1
so has part: feature:3728169-3728372:-1:exon
so has part: feature:3687234-3687293:-1:exon
so has part: feature:3679315-3679455:-1:exon
so has part: feature:3676504-3676619:-1:exon
so has part: feature:3666997-3667111:-1:exon
so has part: feature:3660291-3660392:-1:exon
so has part: feature:3656965-3657105:-1:exon
so has part: feature:3651579-3651868:-1:exon
so has part: feature:3642959-3643136:-1:exon
so has part: feature:3634894-3635100:-1:exon
so has part: feature:3633478-3633577:-1:exon
so has part: feature:3631930-3632291:-1:exon
so has part: feature:3627544-3627666:-1:exon
so has part: feature:3623890-3623976:-1:exon
so has part: feature:3618411-3618545:-1:exon
so has part: feature:3617622-3617744:-1:exon
so has part: feature:3612887-3613011:-1:exon
so has part: feature:3609186-3609282:-1:exon
so has part: feature:3604940-3605144:-1:exon
so has part: feature:3597758-3598323:-1:exon

XP_032901497.1
type: Protein
SIO_000068: ncbiprotein

position:3597758:-1
position: 3597758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3728169-3728372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3687234-3687293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3679315-3679455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3676504-3676619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3666997-3667111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3660291-3660392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3656965-3657105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3651579-3651868:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3642959-3643136:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3634894-3635100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3633478-3633577:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3631930-3632291:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3627544-3627666:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3623890-3623976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3618411-3618545:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3617622-3617744:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3612887-3613011:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3609186-3609282:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3604940-3605144:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3597758-3598323:-1:exon

heatr6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: heatr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HEAT repeat-containing protein 6 isoform X1
translation: MAAERGHGEPAAAAAAVTTHPSSDFNRFRNKLFTIRASESENFKTEVNLVFDQLISENYLSHSSISREDVCSLLVQACRLVQLNQEHLVSKMCQLIHHLLNRLQVTVDEQSLELLLSYCIRALQQCNSWTHVEILQAVAALVYGNGPRCQKFLPDLLGKNGILLQLSAPTESDVDLRRAAVYCMANLCLSVPGQAYLEEQYKVVSLQTFLNVLRNPKTPDVDDVTVCKLLQNALKGIHSILNAGRINLTQADQLGTLLAALKTYMFYGFPGVNIEVPVVLYPAPLPQYEGSSSIKDQTGSATNTSKQVGHKKKKSRSKNKKEQPEDEKEDHSNKAQPEPLQQPENGTPRGENNTLSLQGPKNYTDNIVPSLDGKETSNSFYPAWKKINSSDSEYSDTEGGIQSKLRSLQGKVRQGALACFLSTIKSIEKKVLHGYWSAFIADVPGIGSPQAVSLMTIALKDPSPKVRAGSLQVLSAILEGSKHFLSVAEDTNDHRRAFTPFSATLASSIRELHRCLLLALVAESSPQTLTQIIKCLANLVTNVPYNRLKPGLLTRVWNQIKPHTCFRDVNVRVCSLTLLGAILSVQAPLPEVQLLLQQPSSPGLSSSGSGTPHRLSDAESWRKPPQGANREREKEIPESPVQELCWLIQLCVSIITVPKYEPYSDSDTGTGTASNSYEASPVRVEALQVLALLVKGYFTMAQTSLLELEEVACLCMEEQDPSIQLHGARLVEEIGSGIVQQHKPDSPTPQCQRVPVTQVVNFWSRMLNGPLPGALQNDEHSTLQTSTCDAISSILPEAFNSLPNENQILCITVLLGLNHSEHPLVKAAAVRALGVYILFPSLRQDVMFVADTANAILTSLDDKSLNVRTKAAWSLANLTDTLIANMETMGRDFQEELSDVLLLKMLKSATHASHDKDKVKSNAVRALGNLLHFLQPHHISKTQFKPGIEESIQALIRTVLSEATMKVRWNACYALGNMFKNPAIPLDSASWAPQAFCALTSVVKTCKNFKVRIKSAMALAIPDSRQRYGDTKQFCEIWSALVLALEKSEETEDFLEFKYCASLRTQICQTLLHLLRLVSAEDMPCIHKTLSVKGNLMRVFVQRFLTSAVEADETMTQSDPQDRARMLQEAVQNINSLQDVALDEREMIVKYLDDIFKHCVEPMQTETGPKMTQA
SIO_010081: heatr6
subclass of: SO_0000673
so part of: heatr6
location: complement(join(3597758..3598323,3604940..3605144,3609186..3609282,3612887..3613011,3617622..3617744,3618411..3618545,3623890..3623976,3627544..3627666,3631930..3632291,3633478..3633577,3634894..3635100,3642959..3643136,3651579..3651868,3656965..3657105,3660291..3660392,3666997..3667111,3676504..3676619,3679315..3679455,3687186..3687293,3728169..3728372))
location: region:3597758-3728372:-1
so has part: feature:3728169-3728372:-1:exon
so has part: feature:3687186-3687293:-1:exon
so has part: feature:3679315-3679455:-1:exon
so has part: feature:3676504-3676619:-1:exon
so has part: feature:3666997-3667111:-1:exon
so has part: feature:3660291-3660392:-1:exon
so has part: feature:3656965-3657105:-1:exon
so has part: feature:3651579-3651868:-1:exon
so has part: feature:3642959-3643136:-1:exon
so has part: feature:3634894-3635100:-1:exon
so has part: feature:3633478-3633577:-1:exon
so has part: feature:3631930-3632291:-1:exon
so has part: feature:3627544-3627666:-1:exon
so has part: feature:3623890-3623976:-1:exon
so has part: feature:3618411-3618545:-1:exon
so has part: feature:3617622-3617744:-1:exon
so has part: feature:3612887-3613011:-1:exon
so has part: feature:3609186-3609282:-1:exon
so has part: feature:3604940-3605144:-1:exon
so has part: feature:3597758-3598323:-1:exon

XP_032901496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3728169-3728372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3687186-3687293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3679315-3679455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3676504-3676619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3666997-3667111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3660291-3660392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3656965-3657105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3651579-3651868:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3642959-3643136:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3634894-3635100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3633478-3633577:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3631930-3632291:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3627544-3627666:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3623890-3623976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3618411-3618545:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3617622-3617744:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3612887-3613011:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3609186-3609282:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3604940-3605144:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3597758-3598323:-1:exon

heatr6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: heatr6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HEAT repeat-containing protein 6 isoform X3
translation: MCQLIHHLLNRLQVTVDEQSLELLLSYCIRALQQCNSWTHVEILQAVAALVYGNGPRCQKFLPDLLGKNGILLQLSAPTESDVDLRRAAVYCMANLCLSVPGQAYLEEQYKVVSLQTFLNVLRNPKTPDVDDVTVCKLLQNALKGIHSILNAGRINLTQADQLGTLLAALKTYMFYGFPGVNIEVPVVLYPAPLPQYEGSSSIKDQTGSATNTSKQVGHKKKKSRSKNKKEQPEDEKEDHSNKAQPEPLQQPENGTPRGENNTLSLQGPKNYTDNIVPSLDGKETSNSFYPAWKKINSSDSEYSDTEGGIQSKLRSLQGKVRQGALACFLSTIKSIEKKVLHGYWSAFIADVPGIGSPQAVSLMTIALKDPSPKVRAGSLQVLSAILEGSKHFLSVAEDTNDHRRAFTPFSATLASSIRELHRCLLLALVAESSPQTLTQIIKCLANLVTNVPYNRLKPGLLTRVWNQIKPHTCFRDVNVRVCSLTLLGAILSVQAPLPEVQLLLQQPSSPGLSSSGSGTPHRLSDAESWRKPPQGANREREKEIPESPVQELCWLIQLCVSIITVPKYEPYSDSDTGTGTASNSYEASPVRVEALQVLALLVKGYFTMAQTSLLELEEVACLCMEEQDPSIQLHGARLVEEIGSGIVQQHKPDSPTPQCQRVPVTQVVNFWSRMLNGPLPGALQNDEHSTLQTSTCDAISSILPEAFNSLPNENQILCITVLLGLNHSEHPLVKAAAVRALGVYILFPSLRQDVMFVADTANAILTSLDDKSLNVRTKAAWSLANLTDTLIANMETMGRDFQEELSDVLLLKMLKSATHASHDKDKVKSNAVRALGNLLHFLQPHHISKTQFKPGIEESIQALIRTVLSEATMKVRWNACYALGNMFKNPAIPLDSASWAPQAFCALTSVVKTCKNFKVRIKSAMALAIPDSRQRYGDTKQFCEIWSALVLALEKSEETEDFLEFKYCASLRTQICQTLLHLLRLVSAEDMPCIHKTLSVKGNLMRVFVQRFLTSAVEADETMTQSDPQDRARMLQEAVQNINSLQDVALDEREMIVKYLDDIFKHCVEPMQTETGPKMTQA
SIO_010081: heatr6
subclass of: SO_0000673
so part of: heatr6
location: complement(join(3597758..3598323,3604940..3605144,3609186..3609282,3612887..3613011,3617622..3617744,3618411..3618545,3623890..3623976,3627544..3627666,3631930..3632291,3633478..3633577,3634894..3635100,3642959..3643136,3651579..3651868,3656965..3657105,3660291..3660392,3666997..3667111,3676504..3676619,3679315..3679455,3687186..3687224))
location: region:3597758-3687224:-1
so has part: feature:3687186-3687224:-1:exon
so has part: feature:3679315-3679455:-1:exon
so has part: feature:3676504-3676619:-1:exon
so has part: feature:3666997-3667111:-1:exon
so has part: feature:3660291-3660392:-1:exon
so has part: feature:3656965-3657105:-1:exon
so has part: feature:3651579-3651868:-1:exon
so has part: feature:3642959-3643136:-1:exon
so has part: feature:3634894-3635100:-1:exon
so has part: feature:3633478-3633577:-1:exon
so has part: feature:3631930-3632291:-1:exon
so has part: feature:3627544-3627666:-1:exon
so has part: feature:3623890-3623976:-1:exon
so has part: feature:3618411-3618545:-1:exon
so has part: feature:3617622-3617744:-1:exon
so has part: feature:3612887-3613011:-1:exon
so has part: feature:3609186-3609282:-1:exon
so has part: feature:3604940-3605144:-1:exon
so has part: feature:3597758-3598323:-1:exon

XP_032901498.1
type: Protein
SIO_000068: ncbiprotein

position:3687224:-1
position: 3687224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3687186-3687224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3679315-3679455:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3676504-3676619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3666997-3667111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3660291-3660392:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3656965-3657105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3651579-3651868:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3642959-3643136:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3634894-3635100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3633478-3633577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3631930-3632291:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3627544-3627666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3623890-3623976:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3618411-3618545:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3617622-3617744:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3612887-3613011:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3609186-3609282:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3604940-3605144:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3597758-3598323:-1:exon

LOC116988741
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3614388..3624926
location: region:3614388-3624926:1
so has part: feature:3614388-3624926:1:exon
subclass of: SO_0000011

116988741
type: Gene
SIO_000068: ncbigene

position:3614388:1
position: 3614388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3624926:1
position: 3624926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3614388-3624926:1:exon

LOC116988741
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988741
product: uncharacterized LOC116988741
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416056.1
SIO_010081: LOC116988741
subclass of: SO_0000673
so part of: LOC116988741
location: join(3614388..3614412,3616786..3616788,3624787..3624926)
location: region:3614388-3624926:1
so has part: feature:3614388-3614412:1:exon
so has part: feature:3616786-3616788:1:exon
so has part: feature:3624787-3624926:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3614388-3614412:1:exon

position:3614412:1
position: 3614412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3616786-3616788:1:exon

position:3616786:1
position: 3616786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3616788:1
position: 3616788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3624787-3624926:1:exon

position:3624787:1
position: 3624787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988740
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988740
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3701598..3722167)
location: region:3701598-3722167:-1
so has part: feature:3701598-3722167:-1:exon
subclass of: SO_0000011

116988740
type: Gene
SIO_000068: ncbigene

position:3701598:-1
position: 3701598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3722167:-1
position: 3722167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3701598-3722167:-1:exon

LOC116988740
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988740
product: uncharacterized LOC116988740
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416055.1
SIO_010081: LOC116988740
subclass of: SO_0000673
so part of: LOC116988740
location: complement(join(3701598..3701609,3701892..3701898,3722072..3722167))
location: region:3701598-3722167:-1
so has part: feature:3722072-3722167:-1:exon
so has part: feature:3701892-3701898:-1:exon
so has part: feature:3701598-3701609:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3722072-3722167:-1:exon

position:3722072:-1
position: 3722072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3701892-3701898:-1:exon

position:3701892:-1
position: 3701892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3701898:-1
position: 3701898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3701598-3701609:-1:exon

position:3701609:-1
position: 3701609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dynll2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: dynll2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3750393..3759066)
location: region:3750393-3759066:-1
so has part: feature:3750393-3759066:-1:exon
subclass of: SO_0000010

116988742
type: Gene
SIO_000068: ncbigene

position:3750393:-1
position: 3750393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3759066:-1
position: 3759066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3750393-3759066:-1:exon

dynll2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dynll2
product: dynein light chain LC8-type 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_033045608.1
SIO_010081: dynll2
subclass of: SO_0000673
so part of: dynll2
location: complement(join(3750393..3752505,3757155..3757291,3758935..3759066))
location: region:3750393-3759066:-1
so has part: feature:3758935-3759066:-1:exon
so has part: feature:3757155-3757291:-1:exon
so has part: feature:3750393-3752505:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3758935-3759066:-1:exon

position:3758935:-1
position: 3758935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3757155-3757291:-1:exon

position:3757155:-1
position: 3757155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3757291:-1
position: 3757291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3750393-3752505:-1:exon

position:3752505:-1
position: 3752505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dynll2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dynll2
product: dynein light chain LC8-type 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033045610.1
SIO_010081: dynll2
subclass of: SO_0000673
so part of: dynll2
location: complement(join(3750393..3752505,3757155..3757291,3758564..3758585))
location: region:3750393-3758585:-1
so has part: feature:3758564-3758585:-1:exon
so has part: feature:3757155-3757291:-1:exon
so has part: feature:3750393-3752505:-1:exon

position:3758585:-1
position: 3758585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3758564-3758585:-1:exon

position:3758564:-1
position: 3758564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3757155-3757291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3750393-3752505:-1:exon

dynll2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dynll2
product: dynein light chain LC8-type 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033045609.1
SIO_010081: dynll2
subclass of: SO_0000673
so part of: dynll2
location: complement(join(3750393..3752505,3757155..3757291,3758427..3758564))
location: region:3750393-3758564:-1
so has part: feature:3758427-3758564:-1:exon
so has part: feature:3757155-3757291:-1:exon
so has part: feature:3750393-3752505:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3758427-3758564:-1:exon

position:3758427:-1
position: 3758427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3757155-3757291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3750393-3752505:-1:exon

dynll2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dynll2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein light chain 2, cytoplasmic
translation: MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
SIO_010081: dynll2
subclass of: SO_0000673
so part of: dynll2
location: complement(join(3752368..3752505,3757155..3757286))
location: region:3752368-3757286:-1
so has part: feature:3757155-3757286:-1:exon
so has part: feature:3752368-3752505:-1:exon

XP_032901499.1
type: Protein
SIO_000068: ncbiprotein

position:3752368:-1
position: 3752368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3757286:-1
position: 3757286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3757155-3757286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3752368-3752505:-1:exon

dynll2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dynll2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein light chain 2, cytoplasmic
translation: MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
SIO_010081: dynll2
subclass of: SO_0000673
so part of: dynll2
location: complement(join(3752368..3752505,3757155..3757286))
location: region:3752368-3757286:-1
so has part: feature:3757155-3757286:-1:exon
so has part: feature:3752368-3752505:-1:exon

XP_032901500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3757155-3757286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3752368-3752505:-1:exon

dynll2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dynll2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein light chain 2, cytoplasmic
translation: MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
SIO_010081: dynll2
subclass of: SO_0000673
so part of: dynll2
location: complement(join(3752368..3752505,3757155..3757286))
location: region:3752368-3757286:-1
so has part: feature:3757155-3757286:-1:exon
so has part: feature:3752368-3752505:-1:exon

XP_032901501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3757155-3757286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3752368-3752505:-1:exon

LOC116989221
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116989221
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3810419..3810614)
location: region:3810419-3810614:-1
so has part: feature:3810419-3810614:-1:exon
subclass of: SO_0000623

116989221
type: Gene
SIO_000068: ncbigene

position:3810419:-1
position: 3810419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3810614:-1
position: 3810614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3810419-3810614:-1:exon

LOC116989221
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snRNA
gene: LOC116989221
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004416181.1
SIO_010081: LOC116989221
subclass of: SO_0000673
so part of: LOC116989221
location: complement(3810419..3810614)
location: region:3810419-3810614:-1
so has part: feature:3810419-3810614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3810419-3810614:-1:exon

srsf1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: srsf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3817912..3824022
location: region:3817912-3824022:1
so has part: feature:3817912-3824022:1:exon
subclass of: SO_0000010

116988743
type: Gene
SIO_000068: ncbigene

position:3817912:1
position: 3817912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3824022:1
position: 3824022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3817912-3824022:1:exon

srsf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: srsf1
product: serine and arginine rich splicing factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033045612.1
SIO_010081: srsf1
subclass of: SO_0000673
so part of: srsf1
location: join(3817912..3818502,3820133..3820374,3820456..3820628,3821676..3824022)
location: region:3817912-3824022:1
so has part: feature:3817912-3818502:1:exon
so has part: feature:3820133-3820374:1:exon
so has part: feature:3820456-3820628:1:exon
so has part: feature:3821676-3824022:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3817912-3818502:1:exon

position:3818502:1
position: 3818502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3820133-3820374:1:exon

position:3820133:1
position: 3820133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3820374:1
position: 3820374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3820456-3820628:1:exon

position:3820456:1
position: 3820456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3820628:1
position: 3820628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3821676-3824022:1:exon

position:3821676:1
position: 3821676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

srsf1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: srsf1
product: serine and arginine rich splicing factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XR_004416057.1
SIO_010081: srsf1
so part of: srsf1
location: join(3817914..3818502,3820133..3820374,3820456..3821809,3822654..3824022)
location: region:3817914-3824022:1
so has part: feature:3817914-3818502:1:exon
so has part: feature:3820133-3820374:1:exon
so has part: feature:3820456-3821809:1:exon
so has part: feature:3822654-3824022:1:exon

position:3817914:1
position: 3817914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3817914-3818502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3820133-3820374:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3820456-3821809:1:exon

position:3821809:1
position: 3821809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3822654-3824022:1:exon

position:3822654:1
position: 3822654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

srsf1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: srsf1
product: serine and arginine rich splicing factor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XR_004416058.1
SIO_010081: srsf1
so part of: srsf1
location: join(3817916..3818502,3820133..3820374,3820456..3820628,3821676..3821809,3822654..3824022)
location: region:3817916-3824022:1
so has part: feature:3817916-3818502:1:exon
so has part: feature:3820133-3820374:1:exon
so has part: feature:3820456-3820628:1:exon
so has part: feature:3821676-3821809:1:exon
so has part: feature:3822654-3824022:1:exon

position:3817916:1
position: 3817916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3817916-3818502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3820133-3820374:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3820456-3820628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3821676-3821809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3822654-3824022:1:exon

srsf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: srsf1
product: serine and arginine rich splicing factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033045611.1
SIO_010081: srsf1
subclass of: SO_0000673
so part of: srsf1
location: join(3817996..3818502,3820133..3820374,3820456..3820628,3821065..3824022)
location: region:3817996-3824022:1
so has part: feature:3817996-3818502:1:exon
so has part: feature:3820133-3820374:1:exon
so has part: feature:3820456-3820628:1:exon
so has part: feature:3821065-3824022:1:exon

position:3817996:1
position: 3817996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3817996-3818502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3820133-3820374:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3820456-3820628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3821065-3824022:1:exon

position:3821065:1
position: 3821065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

srsf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: srsf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 1 isoform X2
translation: MQNHSGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGSIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGGGGGGGGGGGGGGGGGGGQTPRGRYGPPSRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMNYAVRKLDNTKFRSHETYLN
SIO_010081: srsf1
subclass of: SO_0000673
so part of: srsf1
location: join(3818306..3818502,3820133..3820374,3820456..3820628,3821676..3821690)
location: region:3818306-3821690:1
so has part: feature:3818306-3818502:1:exon
so has part: feature:3820133-3820374:1:exon
so has part: feature:3820456-3820628:1:exon
so has part: feature:3821676-3821690:1:exon

XP_032901503.1
type: Protein
SIO_000068: ncbiprotein

position:3818306:1
position: 3818306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3821690:1
position: 3821690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3818306-3818502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3820133-3820374:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3820456-3820628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3821676-3821690:1:exon

srsf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: srsf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 1 isoform X1
translation: MQNHSGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGSIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGGGGGGGGGGGGGGGGGGGQTPRGRYGPPSRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMNYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRTRSRSRSRSRSRSYSPRRSRGSPRYSPRHSRSRSRS
SIO_010081: srsf1
subclass of: SO_0000673
so part of: srsf1
location: join(3818306..3818502,3820133..3820374,3820456..3820628,3821065..3821259)
location: region:3818306-3821259:1
so has part: feature:3818306-3818502:1:exon
so has part: feature:3820133-3820374:1:exon
so has part: feature:3820456-3820628:1:exon
so has part: feature:3821065-3821259:1:exon

XP_032901502.1
type: Protein
SIO_000068: ncbiprotein

position:3821259:1
position: 3821259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3818306-3818502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3820133-3820374:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3820456-3820628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3821065-3821259:1:exon

vezf1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: vezf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3852404..3907614
location: region:3852404-3907614:1
so has part: feature:3852404-3907614:1:exon
subclass of: SO_0000010

116988745
type: Gene
SIO_000068: ncbigene

position:3852404:1
position: 3852404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3907614:1
position: 3907614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3852404-3907614:1:exon

vezf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: vezf1
product: vascular endothelial zinc finger 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033045616.1
SIO_010081: vezf1
subclass of: SO_0000673
so part of: vezf1
location: join(3852404..3852556,3881262..3881941,3883670..3883733,3886230..3886401,3891586..3891780,3905759..3907614)
location: region:3852404-3907614:1
so has part: feature:3852404-3852556:1:exon
so has part: feature:3881262-3881941:1:exon
so has part: feature:3883670-3883733:1:exon
so has part: feature:3886230-3886401:1:exon
so has part: feature:3891586-3891780:1:exon
so has part: feature:3905759-3907614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3852404-3852556:1:exon

position:3852556:1
position: 3852556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3881262-3881941:1:exon

position:3881262:1
position: 3881262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3881941:1
position: 3881941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3883670-3883733:1:exon

position:3883670:1
position: 3883670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3883733:1
position: 3883733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3886230-3886401:1:exon

position:3886230:1
position: 3886230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3886401:1
position: 3886401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3891586-3891780:1:exon

position:3891586:1
position: 3891586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3891780:1
position: 3891780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3905759-3907614:1:exon

position:3905759:1
position: 3905759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

vezf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: vezf1
product: vascular endothelial zinc finger 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033045618.1
SIO_010081: vezf1
subclass of: SO_0000673
so part of: vezf1
location: join(3852404..3852556,3881262..3881941,3883670..3883733,3886230..3886401,3905759..3907614)
location: region:3852404-3907614:1
so has part: feature:3852404-3852556:1:exon
so has part: feature:3881262-3881941:1:exon
so has part: feature:3883670-3883733:1:exon
so has part: feature:3886230-3886401:1:exon
so has part: feature:3905759-3907614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3852404-3852556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3881262-3881941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3883670-3883733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3886230-3886401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3905759-3907614:1:exon

vezf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: vezf1
product: vascular endothelial zinc finger 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033045614.1
SIO_010081: vezf1
subclass of: SO_0000673
so part of: vezf1
location: join(3852404..3852556,3881262..3881941,3883670..3883733,3886230..3886401,3891586..3891780,3901904..3902140,3905759..3905889)
location: region:3852404-3905889:1
so has part: feature:3852404-3852556:1:exon
so has part: feature:3881262-3881941:1:exon
so has part: feature:3883670-3883733:1:exon
so has part: feature:3886230-3886401:1:exon
so has part: feature:3891586-3891780:1:exon
so has part: feature:3901904-3902140:1:exon
so has part: feature:3905759-3905889:1:exon

position:3905889:1
position: 3905889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3852404-3852556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3881262-3881941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3883670-3883733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3886230-3886401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891586-3891780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3901904-3902140:1:exon

position:3901904:1
position: 3901904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3902140:1
position: 3902140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3905759-3905889:1:exon

vezf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: vezf1
product: vascular endothelial zinc finger 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033045615.1
SIO_010081: vezf1
subclass of: SO_0000673
so part of: vezf1
location: join(3852404..3852556,3881262..3881941,3883670..3883733,3886230..3886401,3891586..3891780,3901904..3902144,3905759..3905873)
location: region:3852404-3905873:1
so has part: feature:3852404-3852556:1:exon
so has part: feature:3881262-3881941:1:exon
so has part: feature:3883670-3883733:1:exon
so has part: feature:3886230-3886401:1:exon
so has part: feature:3891586-3891780:1:exon
so has part: feature:3901904-3902144:1:exon
so has part: feature:3905759-3905873:1:exon

position:3905873:1
position: 3905873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3852404-3852556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3881262-3881941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3883670-3883733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3886230-3886401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891586-3891780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3901904-3902144:1:exon

position:3902144:1
position: 3902144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3905759-3905873:1:exon

vezf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: vezf1
product: vascular endothelial zinc finger 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033045613.1
SIO_010081: vezf1
subclass of: SO_0000673
so part of: vezf1
location: join(3852404..3852556,3881262..3881941,3883670..3883733,3886230..3886401,3891586..3891780,3901904..3903299)
location: region:3852404-3903299:1
so has part: feature:3852404-3852556:1:exon
so has part: feature:3881262-3881941:1:exon
so has part: feature:3883670-3883733:1:exon
so has part: feature:3886230-3886401:1:exon
so has part: feature:3891586-3891780:1:exon
so has part: feature:3901904-3903299:1:exon

position:3903299:1
position: 3903299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3852404-3852556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3881262-3881941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3883670-3883733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3886230-3886401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891586-3891780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3901904-3903299:1:exon

vezf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: vezf1
product: vascular endothelial zinc finger 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033045617.1
SIO_010081: vezf1
subclass of: SO_0000673
so part of: vezf1
location: join(3852404..3852556,3881262..3881941,3883670..3883733,3886230..3886401,3901904..3903298)
location: region:3852404-3903298:1
so has part: feature:3852404-3852556:1:exon
so has part: feature:3881262-3881941:1:exon
so has part: feature:3883670-3883733:1:exon
so has part: feature:3886230-3886401:1:exon
so has part: feature:3901904-3903298:1:exon

position:3903298:1
position: 3903298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3852404-3852556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3881262-3881941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3883670-3883733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3886230-3886401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3901904-3903298:1:exon

vezf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: vezf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial zinc finger 1 isoform X2
translation: MEATWGAFIFQAADVSQQQHQQHVQNSLLPILHSVNEPREQVPVTALPTAAKSPDPKEAPKPLMTVEKKEKTRTPVICSYCSKAFRDSYHLRRHESCHTGIKLVSRPRKVPTMVSLMSSAPSVGATASLVSTVAGMLTTTAASTSTITSSSTPPVPTTKNAGRRVKKNHGCELCGKAFRDVYHLNRHKLSHSDEKPFECPVCQQRFKRKDRMSYHVRSHEGGINKPYICSLCGKGFSRPDHLSCHVKHVHSTERPFKCQTCEAAFATKDRLRSHMIRHEGKVSCHICGKLLSAAYISNHIKMHNHNQNHNCNVCNKGFTTAAYLRVHARNHHGVHYKSQRFVCEQCGLQCQSHNHLIGHKKSHMGETPTSSASSVAAVALKDTAEVCHTPAAAPSPENITVRPVDSVPFLSQVLPSSPPW
SIO_010081: vezf1
subclass of: SO_0000673
so part of: vezf1
location: join(3852524..3852556,3881262..3881941,3883670..3883733,3886230..3886401,3891586..3891780,3905759..3905877)
location: region:3852524-3905877:1
so has part: feature:3852524-3852556:1:exon
so has part: feature:3881262-3881941:1:exon
so has part: feature:3883670-3883733:1:exon
so has part: feature:3886230-3886401:1:exon
so has part: feature:3891586-3891780:1:exon
so has part: feature:3905759-3905877:1:exon

XP_032901507.1
type: Protein
SIO_000068: ncbiprotein

position:3852524:1
position: 3852524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3905877:1
position: 3905877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3852524-3852556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3881262-3881941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3883670-3883733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3886230-3886401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891586-3891780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3905759-3905877:1:exon

vezf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: vezf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial zinc finger 1 isoform X4
translation: MEATWGAFIFQAADVSQQQHQQHVQNSLLPILHSVNEPREQVPVTALPTAAKSPDPKEAPKPLMTVEKKEKTRTPVICSYCSKAFRDSYHLRRHESCHTGIKLVSRPRKVPTMVSLMSSAPSVGATASLVSTVAGMLTTTAASTSTITSSSTPPVPTTKNAGRRVKKNHGCELCGKAFRDVYHLNRHKLSHSDEKPFECPVCQQRFKRKDRMSYHVRSHEGGINKPYICSLCGKGFSRPDHLSCHVKHVHSTERPFKCQTCEAAFATKDRLRSHMIRHEGKVSCHICGKLLSAAYISNHIKMHNHNQNHNCNVCNKDTAEVCHTPAAAPSPENITVRPVDSVPFLSQVLPSSPPW
SIO_010081: vezf1
subclass of: SO_0000673
so part of: vezf1
location: join(3852524..3852556,3881262..3881941,3883670..3883733,3886230..3886401,3905759..3905877)
location: region:3852524-3905877:1
so has part: feature:3852524-3852556:1:exon
so has part: feature:3881262-3881941:1:exon
so has part: feature:3883670-3883733:1:exon
so has part: feature:3886230-3886401:1:exon
so has part: feature:3905759-3905877:1:exon

XP_032901509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3852524-3852556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3881262-3881941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3883670-3883733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3886230-3886401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3905759-3905877:1:exon

vezf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: vezf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial zinc finger 1 isoform X1
translation: MEATWGAFIFQAADVSQQQHQQHVQNSLLPILHSVNEPREQVPVTALPTAAKSPDPKEAPKPLMTVEKKEKTRTPVICSYCSKAFRDSYHLRRHESCHTGIKLVSRPRKVPTMVSLMSSAPSVGATASLVSTVAGMLTTTAASTSTITSSSTPPVPTTKNAGRRVKKNHGCELCGKAFRDVYHLNRHKLSHSDEKPFECPVCQQRFKRKDRMSYHVRSHEGGINKPYICSLCGKGFSRPDHLSCHVKHVHSTERPFKCQTCEAAFATKDRLRSHMIRHEGKVSCHICGKLLSAAYISNHIKMHNHNQNHNCNVCNKGFTTAAYLRVHARNHHGVHYKSQRFVCEQCGLQCQSHNHLIGHKKSHMGETPTSSASSVAAVALKDFPPMDTTFPLASPFRGGLHYSYCQCHSTIGQQEAPLKWGELDSACFPAASPHLTWNALVLRGASSSSPVEN
SIO_010081: vezf1
subclass of: SO_0000673
so part of: vezf1
location: join(3852524..3852556,3881262..3881941,3883670..3883733,3886230..3886401,3891586..3891780,3901904..3902121)
location: region:3852524-3902121:1
so has part: feature:3852524-3852556:1:exon
so has part: feature:3881262-3881941:1:exon
so has part: feature:3883670-3883733:1:exon
so has part: feature:3886230-3886401:1:exon
so has part: feature:3891586-3891780:1:exon
so has part: feature:3901904-3902121:1:exon

XP_032901504.1
type: Protein
SIO_000068: ncbiprotein

position:3902121:1
position: 3902121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3852524-3852556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3881262-3881941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3883670-3883733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3886230-3886401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891586-3891780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3901904-3902121:1:exon

vezf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: vezf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial zinc finger 1 isoform X1
translation: MEATWGAFIFQAADVSQQQHQQHVQNSLLPILHSVNEPREQVPVTALPTAAKSPDPKEAPKPLMTVEKKEKTRTPVICSYCSKAFRDSYHLRRHESCHTGIKLVSRPRKVPTMVSLMSSAPSVGATASLVSTVAGMLTTTAASTSTITSSSTPPVPTTKNAGRRVKKNHGCELCGKAFRDVYHLNRHKLSHSDEKPFECPVCQQRFKRKDRMSYHVRSHEGGINKPYICSLCGKGFSRPDHLSCHVKHVHSTERPFKCQTCEAAFATKDRLRSHMIRHEGKVSCHICGKLLSAAYISNHIKMHNHNQNHNCNVCNKGFTTAAYLRVHARNHHGVHYKSQRFVCEQCGLQCQSHNHLIGHKKSHMGETPTSSASSVAAVALKDFPPMDTTFPLASPFRGGLHYSYCQCHSTIGQQEAPLKWGELDSACFPAASPHLTWNALVLRGASSSSPVEN
SIO_010081: vezf1
subclass of: SO_0000673
so part of: vezf1
location: join(3852524..3852556,3881262..3881941,3883670..3883733,3886230..3886401,3891586..3891780,3901904..3902121)
location: region:3852524-3902121:1
so has part: feature:3852524-3852556:1:exon
so has part: feature:3881262-3881941:1:exon
so has part: feature:3883670-3883733:1:exon
so has part: feature:3886230-3886401:1:exon
so has part: feature:3891586-3891780:1:exon
so has part: feature:3901904-3902121:1:exon

XP_032901505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3852524-3852556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3881262-3881941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3883670-3883733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3886230-3886401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891586-3891780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3901904-3902121:1:exon

vezf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: vezf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial zinc finger 1 isoform X1
translation: MEATWGAFIFQAADVSQQQHQQHVQNSLLPILHSVNEPREQVPVTALPTAAKSPDPKEAPKPLMTVEKKEKTRTPVICSYCSKAFRDSYHLRRHESCHTGIKLVSRPRKVPTMVSLMSSAPSVGATASLVSTVAGMLTTTAASTSTITSSSTPPVPTTKNAGRRVKKNHGCELCGKAFRDVYHLNRHKLSHSDEKPFECPVCQQRFKRKDRMSYHVRSHEGGINKPYICSLCGKGFSRPDHLSCHVKHVHSTERPFKCQTCEAAFATKDRLRSHMIRHEGKVSCHICGKLLSAAYISNHIKMHNHNQNHNCNVCNKGFTTAAYLRVHARNHHGVHYKSQRFVCEQCGLQCQSHNHLIGHKKSHMGETPTSSASSVAAVALKDFPPMDTTFPLASPFRGGLHYSYCQCHSTIGQQEAPLKWGELDSACFPAASPHLTWNALVLRGASSSSPVEN
SIO_010081: vezf1
subclass of: SO_0000673
so part of: vezf1
location: join(3852524..3852556,3881262..3881941,3883670..3883733,3886230..3886401,3891586..3891780,3901904..3902121)
location: region:3852524-3902121:1
so has part: feature:3852524-3852556:1:exon
so has part: feature:3881262-3881941:1:exon
so has part: feature:3883670-3883733:1:exon
so has part: feature:3886230-3886401:1:exon
so has part: feature:3891586-3891780:1:exon
so has part: feature:3901904-3902121:1:exon

XP_032901506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3852524-3852556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3881262-3881941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3883670-3883733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3886230-3886401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3891586-3891780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3901904-3902121:1:exon

vezf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: vezf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial zinc finger 1 isoform X3
translation: MEATWGAFIFQAADVSQQQHQQHVQNSLLPILHSVNEPREQVPVTALPTAAKSPDPKEAPKPLMTVEKKEKTRTPVICSYCSKAFRDSYHLRRHESCHTGIKLVSRPRKVPTMVSLMSSAPSVGATASLVSTVAGMLTTTAASTSTITSSSTPPVPTTKNAGRRVKKNHGCELCGKAFRDVYHLNRHKLSHSDEKPFECPVCQQRFKRKDRMSYHVRSHEGGINKPYICSLCGKGFSRPDHLSCHVKHVHSTERPFKCQTCEAAFATKDRLRSHMIRHEGKVSCHICGKLLSAAYISNHIKMHNHNQNHNCNVCNKDFPPMDTTFPLASPFRGGLHYSYCQCHSTIGQQEAPLKWGELDSACFPAASPHLTWNALVLRGASSSSPVEN
SIO_010081: vezf1
subclass of: SO_0000673
so part of: vezf1
location: join(3852524..3852556,3881262..3881941,3883670..3883733,3886230..3886401,3901904..3902121)
location: region:3852524-3902121:1
so has part: feature:3852524-3852556:1:exon
so has part: feature:3881262-3881941:1:exon
so has part: feature:3883670-3883733:1:exon
so has part: feature:3886230-3886401:1:exon
so has part: feature:3901904-3902121:1:exon

XP_032901508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3852524-3852556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3881262-3881941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3883670-3883733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3886230-3886401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3901904-3902121:1:exon

LOC116988746
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3918641..3934105)
location: region:3918641-3934105:-1
so has part: feature:3918641-3934105:-1:exon
subclass of: SO_0000011

116988746
type: Gene
SIO_000068: ncbigene

position:3918641:-1
position: 3918641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3934105:-1
position: 3934105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3918641-3934105:-1:exon

LOC116988746
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988746
product: uncharacterized LOC116988746
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004416060.1
SIO_010081: LOC116988746
subclass of: SO_0000673
so part of: LOC116988746
location: complement(join(3918641..3918678,3925831..3925835,3934093..3934105))
location: region:3918641-3934105:-1
so has part: feature:3934093-3934105:-1:exon
so has part: feature:3925831-3925835:-1:exon
so has part: feature:3918641-3918678:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3934093-3934105:-1:exon

position:3934093:-1
position: 3934093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3925831-3925835:-1:exon

position:3925831:-1
position: 3925831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3925835:-1
position: 3925835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3918641-3918678:-1:exon

position:3918678:-1
position: 3918678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cuedc1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: cuedc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3946639..4039313
location: region:3946639-4039313:1
so has part: feature:3946639-4039313:1:exon
subclass of: SO_0000010

116988747
type: Gene
SIO_000068: ncbigene

position:3946639:1
position: 3946639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4039313:1
position: 4039313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3946639-4039313:1:exon

cuedc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cuedc1
product: CUE domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_033045619.1
SIO_010081: cuedc1
subclass of: SO_0000673
so part of: cuedc1
location: join(3946639..3946864,4002774..4003441,4012891..4013018,4021126..4021252,4022213..4022387,4025477..4025569,4027593..4027682,4030574..4030667,4033773..4033831,4037410..4037479,4038429..4039313)
location: region:3946639-4039313:1
so has part: feature:3946639-3946864:1:exon
so has part: feature:4002774-4003441:1:exon
so has part: feature:4012891-4013018:1:exon
so has part: feature:4021126-4021252:1:exon
so has part: feature:4022213-4022387:1:exon
so has part: feature:4025477-4025569:1:exon
so has part: feature:4027593-4027682:1:exon
so has part: feature:4030574-4030667:1:exon
so has part: feature:4033773-4033831:1:exon
so has part: feature:4037410-4037479:1:exon
so has part: feature:4038429-4039313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3946639-3946864:1:exon

position:3946864:1
position: 3946864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4002774-4003441:1:exon

position:4002774:1
position: 4002774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4003441:1
position: 4003441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4012891-4013018:1:exon

position:4012891:1
position: 4012891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4013018:1
position: 4013018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4021126-4021252:1:exon

position:4021126:1
position: 4021126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4021252:1
position: 4021252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4022213-4022387:1:exon

position:4022213:1
position: 4022213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4022387:1
position: 4022387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4025477-4025569:1:exon

position:4025477:1
position: 4025477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4025569:1
position: 4025569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4027593-4027682:1:exon

position:4027593:1
position: 4027593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4027682:1
position: 4027682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4030574-4030667:1:exon

position:4030574:1
position: 4030574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4030667:1
position: 4030667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4033773-4033831:1:exon

position:4033773:1
position: 4033773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4033831:1
position: 4033831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4037410-4037479:1:exon

position:4037410:1
position: 4037410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4037479:1
position: 4037479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4038429-4039313:1:exon

position:4038429:1
position: 4038429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cuedc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cuedc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUE domain-containing protein 1
translation: MTSLFRRSSSGGNSKGGSSTATTTAAASATTTSPSQLINNSRPSRQVRRLEFNQAMEDFKVMFPNMDYDVIECVLRANNGAVDATIDQLLQMNLDSGLDNGYDDSSDSEDSIPAEILERTLEPDSSDEEAPPVYSPPAYDMHIFDRQYHSVPPLPPRRLDIQSSSGGQSQRRYRNWNPPLLGNLPDDFLRILPQQLDVVQNSQKAKVAGSGQESQGSSDQERKLKQYLEDERIALFLQNEEFMKELQRNRDFLLALEKDRLKYESMKSKSTSANESLPSDDISLLSPVPADSGASGAAEASGVALDEALFRDKLKHMGKSTRKKLFELARAFSEKTKMRKLKRKHSLKHHTLGTAASTANLLDDVEGNSCDEEIQFRKQTLQEADEENKERDL
SIO_010081: cuedc1
subclass of: SO_0000673
so part of: cuedc1
location: join(4003097..4003441,4012891..4013018,4021126..4021252,4022213..4022387,4025477..4025569,4027593..4027682,4030574..4030667,4033773..4033831,4037410..4037479,4038429)
location: region:4003097-4038429:1
so has part: feature:4003097-4003441:1:exon
so has part: feature:4012891-4013018:1:exon
so has part: feature:4021126-4021252:1:exon
so has part: feature:4022213-4022387:1:exon
so has part: feature:4025477-4025569:1:exon
so has part: feature:4027593-4027682:1:exon
so has part: feature:4030574-4030667:1:exon
so has part: feature:4033773-4033831:1:exon
so has part: feature:4037410-4037479:1:exon
so has part: feature:4038429-4038429:1:exon

XP_032901510.1
type: Protein
SIO_000068: ncbiprotein

position:4003097:1
position: 4003097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4003097-4003441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4012891-4013018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4021126-4021252:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4022213-4022387:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4025477-4025569:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4027593-4027682:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4030574-4030667:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4033773-4033831:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4037410-4037479:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4038429-4038429:1:exon

gemin4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: gemin4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4061824..4071932
location: region:4061824-4071932:1
so has part: feature:4061824-4071932:1:exon
subclass of: SO_0000010

116988749
type: Gene
SIO_000068: ncbigene

position:4061824:1
position: 4061824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4071932:1
position: 4071932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4061824-4071932:1:exon

gemin4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gemin4
product: gem nuclear organelle associated protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_033045620.1
SIO_010081: gemin4
subclass of: SO_0000673
so part of: gemin4
location: join(4061824..4062058,4063523..4063618,4068437..4071932)
location: region:4061824-4071932:1
so has part: feature:4061824-4062058:1:exon
so has part: feature:4063523-4063618:1:exon
so has part: feature:4068437-4071932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4061824-4062058:1:exon

position:4062058:1
position: 4062058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4063523-4063618:1:exon

position:4063523:1
position: 4063523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4063618:1
position: 4063618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4068437-4071932:1:exon

position:4068437:1
position: 4068437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gemin4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gemin4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gem-associated protein 4
translation: MEWGSWVCCEKMAVLHGGFLLAQKRSEPAKLLEIKKSDWATLGKPIVNAVREICAGEAGVVQGPGETRLWQKKVLAYVWAKLLNPTSNEPNVKEKVDSHTESDRRWKEDLFFPAESMIPDINHTVLFELVKSLGASEVFVELLSALPAGTCHLEVTRFVDHVLDGTTDEDVATFLDVWWEALKLYEGPRDEIVRTFGDEVKKYLARASDVFCHSSKRIRLDPDVSLFPSISSPGSSSNLSIPCLFLHGLRKMKARVTPYDYKCSAITKLTDTLRKSLLSDGAIEHSAEVYLQKLSELIVLGNPKAQTLPVAENFVRIVKNAERELRAPYQKSAFQLPQGELAPGIELLAEIFRSWAPEIQTESKKDTNIERRSLALYRMVESLKCLNQVSPLIQNGDMIPQNTKEILSDFILSSCSFVRKCDSYVSLDDAATVDKVKMSVAFAIINNRMERHAEVCEIFASTPGWAFAEGGWLNCLERNGEVFRSTDVVLKLAGILKDRSSCTATAQSEVKRFKNVVLDCLSALPLLDKNKALLGVLHAYGGQGLCRDGGPMKEWFEEEVNMVFNCITQSETVNSIDKAVTAVLRVAFLNPETTLQKMCRLAAVNLGAHRLFSQILKNLPALSHEDDRSSEGINILAMCLLETTVDSLATAKAENQFLEFLTSLMEPGEMIDPELPRPLLQPAQVVKIFVLPYLTGGDSNIVFPLKVLNRALKMPVTDDGTKEHWLLACCPFPLVFALSQLLDRCILCWEEDSADMSTRVSIETKTLLTQTLEMVCDAVEQIISVNPETWSTSVHWLYRKAEQLDWTVRICLKSIFGGHFKFEVPATLFEVCDLSDDGWSPLNLPQYGPGTGLLAWMECCSASTHMMDQMLSHLIIDSKNVEEVNMFSKGFLVALIQLLPWCSSSEWKRLNHIVRSLLQRELLHVPFTLEYVHYLPLLNLQPFAHHLQFSQLLLRAFQLICSHGCSDWLPPAGWTHVARQCASSMSDILESVKCKLKGLGAQNLDANQEVLFVIMQLFCHVIHIMVMMPPGTSDSLYYVSLELLSQYETLMSANTSTSGLLNKANEKHFLHSIAENLVSEEQRSILLQKISKIC
SIO_010081: gemin4
subclass of: SO_0000673
so part of: gemin4
location: join(4063609..4063618,4068437..4071711)
location: region:4063609-4071711:1
so has part: feature:4063609-4063618:1:exon
so has part: feature:4068437-4071711:1:exon

XP_032901511.1
type: Protein
SIO_000068: ncbiprotein

position:4063609:1
position: 4063609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4071711:1
position: 4071711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4063609-4063618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4068437-4071711:1:exon

tlcd3a
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tlcd3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4081832..4132383)
location: region:4081832-4132383:-1
so has part: feature:4081832-4132383:-1:exon
subclass of: SO_0000010

116988750
type: Gene
SIO_000068: ncbigene

position:4081832:-1
position: 4081832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4132383:-1
position: 4132383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4081832-4132383:-1:exon

tlcd3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tlcd3a
product: TLC domain containing 3A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033045622.1
SIO_010081: tlcd3a
subclass of: SO_0000673
so part of: tlcd3a
location: complement(join(4081832..4082951,4085127..4085222,4100871..4101072,4103843..4103926,4117278..4117570,4132364..4132383))
location: region:4081832-4132383:-1
so has part: feature:4132364-4132383:-1:exon
so has part: feature:4117278-4117570:-1:exon
so has part: feature:4103843-4103926:-1:exon
so has part: feature:4100871-4101072:-1:exon
so has part: feature:4085127-4085222:-1:exon
so has part: feature:4081832-4082951:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4132364-4132383:-1:exon

position:4132364:-1
position: 4132364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4117278-4117570:-1:exon

position:4117278:-1
position: 4117278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4117570:-1
position: 4117570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4103843-4103926:-1:exon

position:4103843:-1
position: 4103843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4103926:-1
position: 4103926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4100871-4101072:-1:exon

position:4100871:-1
position: 4100871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4101072:-1
position: 4101072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4085127-4085222:-1:exon

position:4085127:-1
position: 4085127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4085222:-1
position: 4085222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4081832-4082951:-1:exon

position:4082951:-1
position: 4082951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tlcd3a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tlcd3a
product: TLC domain containing 3A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033045621.1
SIO_010081: tlcd3a
subclass of: SO_0000673
so part of: tlcd3a
location: complement(join(4081832..4082951,4085127..4085222,4100871..4101072,4103843..4103926,4117278..4117570,4119648..4119679))
location: region:4081832-4119679:-1
so has part: feature:4119648-4119679:-1:exon
so has part: feature:4117278-4117570:-1:exon
so has part: feature:4103843-4103926:-1:exon
so has part: feature:4100871-4101072:-1:exon
so has part: feature:4085127-4085222:-1:exon
so has part: feature:4081832-4082951:-1:exon

position:4119679:-1
position: 4119679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4119648-4119679:-1:exon

position:4119648:-1
position: 4119648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4117278-4117570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4103843-4103926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4100871-4101072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4085127-4085222:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4081832-4082951:-1:exon

tlcd3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tlcd3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TLC domain-containing protein 3A
translation: MLHLVVLGCIFFPGLFLLSRRALHNAEPALTDGDVVSLSVRIVSSIQATLAVITGVIITSTCNHVMKDSHWISKDYILFGSPYMVYDIYAMYLCHWYKYNGKSNSSFRFVTSFLKKNPLIILHHLALCLVCFPIVLFYRKGLGDFFLGCLLLAEMSTPFVSLAKILRQLKKQDTMLYKINGIMVLVTFFVCRILVFPFMYWAYGRQYGIPAYRVPFHIPWHCTVANGLIMALQLHWLTLIVKKAVKIVKVE
SIO_010081: tlcd3a
subclass of: SO_0000673
so part of: tlcd3a
location: complement(join(4082700..4082951,4085127..4085222,4100871..4101072,4103843..4103926,4117278..4117399))
location: region:4082700-4117399:-1
so has part: feature:4117278-4117399:-1:exon
so has part: feature:4103843-4103926:-1:exon
so has part: feature:4100871-4101072:-1:exon
so has part: feature:4085127-4085222:-1:exon
so has part: feature:4082700-4082951:-1:exon

XP_032901512.1
type: Protein
SIO_000068: ncbiprotein

position:4082700:-1
position: 4082700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4117399:-1
position: 4117399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4117278-4117399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4103843-4103926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4100871-4101072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4085127-4085222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4082700-4082951:-1:exon

tlcd3a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tlcd3a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TLC domain-containing protein 3A
translation: MLHLVVLGCIFFPGLFLLSRRALHNAEPALTDGDVVSLSVRIVSSIQATLAVITGVIITSTCNHVMKDSHWISKDYILFGSPYMVYDIYAMYLCHWYKYNGKSNSSFRFVTSFLKKNPLIILHHLALCLVCFPIVLFYRKGLGDFFLGCLLLAEMSTPFVSLAKILRQLKKQDTMLYKINGIMVLVTFFVCRILVFPFMYWAYGRQYGIPAYRVPFHIPWHCTVANGLIMALQLHWLTLIVKKAVKIVKVE
SIO_010081: tlcd3a
subclass of: SO_0000673
so part of: tlcd3a
location: complement(join(4082700..4082951,4085127..4085222,4100871..4101072,4103843..4103926,4117278..4117399))
location: region:4082700-4117399:-1
so has part: feature:4117278-4117399:-1:exon
so has part: feature:4103843-4103926:-1:exon
so has part: feature:4100871-4101072:-1:exon
so has part: feature:4085127-4085222:-1:exon
so has part: feature:4082700-4082951:-1:exon

XP_032901513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4117278-4117399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4103843-4103926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4100871-4101072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4085127-4085222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4082700-4082951:-1:exon

vps53
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: vps53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4176922..4536768
location: region:4176922-4536768:1
so has part: feature:4176922-4536768:1:exon
subclass of: SO_0000010

116988751
type: Gene
SIO_000068: ncbigene

position:4176922:1
position: 4176922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4536768:1
position: 4536768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4176922-4536768:1:exon

vps53
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: vps53
product: VPS53 subunit of GARP complex
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033045623.1
SIO_010081: vps53
subclass of: SO_0000673
so part of: vps53
location: join(4176922..4177070,4185504..4185584,4189128..4189177,4208912..4208978,4256575..4256661,4260678..4260793,4264925..4265044,4284760..4284838,4290262..4290405,4295344..4295486,4297591..4297732,4320539..4320634,4376402..4376496,4394646..4394888,4400349..4400496,4420350..4420432,4434804..4434882,4437150..4437298,4477403..4477472,4499794..4499931,4534728..4534832,4536468..4536768)
location: region:4176922-4536768:1
so has part: feature:4176922-4177070:1:exon
so has part: feature:4185504-4185584:1:exon
so has part: feature:4189128-4189177:1:exon
so has part: feature:4208912-4208978:1:exon
so has part: feature:4256575-4256661:1:exon
so has part: feature:4260678-4260793:1:exon
so has part: feature:4264925-4265044:1:exon
so has part: feature:4284760-4284838:1:exon
so has part: feature:4290262-4290405:1:exon
so has part: feature:4295344-4295486:1:exon
so has part: feature:4297591-4297732:1:exon
so has part: feature:4320539-4320634:1:exon
so has part: feature:4376402-4376496:1:exon
so has part: feature:4394646-4394888:1:exon
so has part: feature:4400349-4400496:1:exon
so has part: feature:4420350-4420432:1:exon
so has part: feature:4434804-4434882:1:exon
so has part: feature:4437150-4437298:1:exon
so has part: feature:4477403-4477472:1:exon
so has part: feature:4499794-4499931:1:exon
so has part: feature:4534728-4534832:1:exon
so has part: feature:4536468-4536768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4176922-4177070:1:exon

position:4177070:1
position: 4177070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4185504-4185584:1:exon

position:4185504:1
position: 4185504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4185584:1
position: 4185584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4189128-4189177:1:exon

position:4189128:1
position: 4189128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4189177:1
position: 4189177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4208912-4208978:1:exon

position:4208912:1
position: 4208912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4208978:1
position: 4208978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4256575-4256661:1:exon

position:4256575:1
position: 4256575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4256661:1
position: 4256661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4260678-4260793:1:exon

position:4260678:1
position: 4260678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4260793:1
position: 4260793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4264925-4265044:1:exon

position:4264925:1
position: 4264925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4265044:1
position: 4265044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4284760-4284838:1:exon

position:4284760:1
position: 4284760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4284838:1
position: 4284838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4290262-4290405:1:exon

position:4290262:1
position: 4290262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4290405:1
position: 4290405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4295344-4295486:1:exon

position:4295344:1
position: 4295344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4295486:1
position: 4295486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4297591-4297732:1:exon

position:4297591:1
position: 4297591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4297732:1
position: 4297732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4320539-4320634:1:exon

position:4320539:1
position: 4320539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4320634:1
position: 4320634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4376402-4376496:1:exon

position:4376402:1
position: 4376402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4376496:1
position: 4376496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4394646-4394888:1:exon

position:4394646:1
position: 4394646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4394888:1
position: 4394888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4400349-4400496:1:exon

position:4400349:1
position: 4400349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4400496:1
position: 4400496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4420350-4420432:1:exon

position:4420350:1
position: 4420350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4420432:1
position: 4420432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4434804-4434882:1:exon

position:4434804:1
position: 4434804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4434882:1
position: 4434882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4437150-4437298:1:exon

position:4437150:1
position: 4437150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4437298:1
position: 4437298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4477403-4477472:1:exon

position:4477403:1
position: 4477403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4477472:1
position: 4477472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4499794-4499931:1:exon

position:4499794:1
position: 4499794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4499931:1
position: 4499931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4534728-4534832:1:exon

position:4534728:1
position: 4534728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4534832:1
position: 4534832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4536468-4536768:1:exon

position:4536468:1
position: 4536468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

vps53
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: vps53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 53 homolog
translation: MAATMEEEELEFVDELEGVLHLAPEVQQAIEQVFPSQDPLDRADFNAVEYINALFPTEQSLANIDEVVTKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFAKIKDIKDKAEKSEQMVKEITQDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLMQGVVNVLEHFHKYMGIPQIRQLSERVRAAQTELGQQILADFEEAFPSQSTKRPAGPSNILRDACLVANVLDPRIKQEIIKKFTKQHLSEYHVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEKYGRMFPGEWNMSERITVEFCHVTRIELAKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKRFSGSTLTDGIVKKPEPAPPSTNPFLEDEPGVDCDPEKEGDLEKPKKPKVPDNPFHGIISKCFEPHLYVYIESQDRNLGELIDKFVADFKAQGPPKPNAGDGGVVLPSCADLFVYYKKCMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTISSLLKEKEGSEVAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLAERINLISEMDTFSTVISNSIQLLVQDLDAACDPALTAMSKMPWQNVEHVGDQSAYVTSIILHIKQNVPIIRDNLASTRKYFTQFCIKFVNSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKAPASYTKIVVKGMTRAEMILKVVMAPHDASVVFVDNYIKLLADCSTDTFQKVLDMKGLKRSEQSSMLELFRQRLPTPPSGADNTLTAALSAPSPEQESSRIRKLEKLIKKRL
SIO_010081: vps53
subclass of: SO_0000673
so part of: vps53
location: join(4176975..4177070,4185504..4185584,4189128..4189177,4208912..4208978,4256575..4256661,4260678..4260793,4264925..4265044,4284760..4284838,4290262..4290405,4295344..4295486,4297591..4297732,4320539..4320634,4376402..4376496,4394646..4394888,4400349..4400496,4420350..4420432,4434804..4434882,4437150..4437298,4477403..4477472,4499794..4499931,4534728..4534832,4536468..4536638)
location: region:4176975-4536638:1
so has part: feature:4176975-4177070:1:exon
so has part: feature:4185504-4185584:1:exon
so has part: feature:4189128-4189177:1:exon
so has part: feature:4208912-4208978:1:exon
so has part: feature:4256575-4256661:1:exon
so has part: feature:4260678-4260793:1:exon
so has part: feature:4264925-4265044:1:exon
so has part: feature:4284760-4284838:1:exon
so has part: feature:4290262-4290405:1:exon
so has part: feature:4295344-4295486:1:exon
so has part: feature:4297591-4297732:1:exon
so has part: feature:4320539-4320634:1:exon
so has part: feature:4376402-4376496:1:exon
so has part: feature:4394646-4394888:1:exon
so has part: feature:4400349-4400496:1:exon
so has part: feature:4420350-4420432:1:exon
so has part: feature:4434804-4434882:1:exon
so has part: feature:4437150-4437298:1:exon
so has part: feature:4477403-4477472:1:exon
so has part: feature:4499794-4499931:1:exon
so has part: feature:4534728-4534832:1:exon
so has part: feature:4536468-4536638:1:exon

XP_032901514.1
type: Protein
SIO_000068: ncbiprotein

position:4176975:1
position: 4176975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4536638:1
position: 4536638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4176975-4177070:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4185504-4185584:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4189128-4189177:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4208912-4208978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4256575-4256661:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4260678-4260793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4264925-4265044:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4284760-4284838:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4290262-4290405:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4295344-4295486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4297591-4297732:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4320539-4320634:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4376402-4376496:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4394646-4394888:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4400349-4400496:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4420350-4420432:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4434804-4434882:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4437150-4437298:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4477403-4477472:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4499794-4499931:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4534728-4534832:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4536468-4536638:1:exon

rflnb
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rflnb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4561819..4620464
location: region:4561819-4620464:1
so has part: feature:4561819-4620464:1:exon
subclass of: SO_0000010

116988752
type: Gene
SIO_000068: ncbigene

position:4561819:1
position: 4561819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4620464:1
position: 4620464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4561819-4620464:1:exon

rflnb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rflnb
product: refilin B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033045624.1
SIO_010081: rflnb
subclass of: SO_0000673
so part of: rflnb
location: join(4561819..4562279,4603266..4603375,4619325..4620464)
location: region:4561819-4620464:1
so has part: feature:4561819-4562279:1:exon
so has part: feature:4603266-4603375:1:exon
so has part: feature:4619325-4620464:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4561819-4562279:1:exon

position:4562279:1
position: 4562279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4603266-4603375:1:exon

position:4603266:1
position: 4603266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4603375:1
position: 4603375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4619325-4620464:1:exon

position:4619325:1
position: 4619325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rflnb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rflnb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: refilin-B
translation: MVGSLNLQEVTGPLVETKRLGERVLDSPDSGLPPSPSPTPSLWLPSPGSSADGRLLEQDDHGFPTARQQRHSDPLINSPFQIAGFGPRLHPLSFGEGVEVDPLPPKEIRYTSSVKYDSDRHYIDNVFLQHSLGVGSCRQTVVCIPDCTWRNYKTELKFEMQRKPQRFLSAVIVYPKYAKTVYTTTVDYNCRKAMRRFLSSVELEVTDCIKPSSPTLCFP
SIO_010081: rflnb
subclass of: SO_0000673
so part of: rflnb
location: join(4562064..4562279,4603266..4603375,4619325..4619658)
location: region:4562064-4619658:1
so has part: feature:4562064-4562279:1:exon
so has part: feature:4603266-4603375:1:exon
so has part: feature:4619325-4619658:1:exon

XP_032901515.1
type: Protein
SIO_000068: ncbiprotein

position:4562064:1
position: 4562064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4619658:1
position: 4619658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4562064-4562279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4603266-4603375:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4619325-4619658:1:exon

LOC116988753
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4593825..4610451)
location: region:4593825-4610451:-1
so has part: feature:4593825-4610451:-1:exon
subclass of: SO_0000011

116988753
type: Gene
SIO_000068: ncbigene

position:4593825:-1
position: 4593825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4610451:-1
position: 4610451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4593825-4610451:-1:exon

LOC116988753
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988753
product: uncharacterized LOC116988753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004416062.1
SIO_010081: LOC116988753
subclass of: SO_0000673
so part of: LOC116988753
location: complement(join(4593825..4593834,4608144..4608148,4610336..4610451))
location: region:4593825-4610451:-1
so has part: feature:4610336-4610451:-1:exon
so has part: feature:4608144-4608148:-1:exon
so has part: feature:4593825-4593834:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4610336-4610451:-1:exon

position:4610336:-1
position: 4610336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4608144-4608148:-1:exon

position:4608144:-1
position: 4608144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4608148:-1
position: 4608148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4593825-4593834:-1:exon

position:4593834:-1
position: 4593834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

c28h17orf97
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: c28h17orf97
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4639155..4645595)
location: region:4639155-4645595:-1
so has part: feature:4639155-4645595:-1:exon
subclass of: SO_0000010

116988757
type: Gene
SIO_000068: ncbigene

position:4639155:-1
position: 4639155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4645595:-1
position: 4645595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4639155-4645595:-1:exon

c28h17orf97
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: c28h17orf97
product: chromosome 28 C17orf97 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033045629.1
SIO_010081: c28h17orf97
subclass of: SO_0000673
so part of: c28h17orf97
location: complement(join(4639155..4640039,4645026..4645595))
location: region:4639155-4645595:-1
so has part: feature:4645026-4645595:-1:exon
so has part: feature:4639155-4640039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4645026-4645595:-1:exon

position:4645026:-1
position: 4645026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4639155-4640039:-1:exon

position:4640039:-1
position: 4640039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

c28h17orf97
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: c28h17orf97
product: chromosome 28 C17orf97 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_033045628.1
SIO_010081: c28h17orf97
subclass of: SO_0000673
so part of: c28h17orf97
location: complement(join(4639155..4640039,4644993..4645593))
location: region:4639155-4645593:-1
so has part: feature:4644993-4645593:-1:exon
so has part: feature:4639155-4640039:-1:exon

position:4645593:-1
position: 4645593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4644993-4645593:-1:exon

position:4644993:-1
position: 4644993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4639155-4640039:-1:exon

c28h17orf97
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: c28h17orf97
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LIAT1 isoform X2
translation: MEGSVLASRYKVKSSINLMGDSAEKKKVKKKGAKEKKDSCKIRRNSSTHKRGKSIKLHASKASKASPGMEKSTSQGGTKPCAEPMENSDKSDRDGDQAEASSICSIDQLATSVNESLRWDGVLEDPVAEEERIKLYKLNRQLRYLAAQNTTRKEVQFCQKDFSNSQSQKDNPYIITSKMYQQLASKDHANSYFMGQRT
SIO_010081: c28h17orf97
subclass of: SO_0000673
so part of: c28h17orf97
location: complement(join(4639585..4640039,4645026..4645167))
location: region:4639585-4645167:-1
so has part: feature:4645026-4645167:-1:exon
so has part: feature:4639585-4640039:-1:exon

XP_032901520.1
type: Protein
SIO_000068: ncbiprotein

position:4639585:-1
position: 4639585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4645167:-1
position: 4645167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4645026-4645167:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4639585-4640039:-1:exon

c28h17orf97
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: c28h17orf97
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LIAT1 isoform X1
translation: MEGSVLASRYKVKSSINLMGDSAEKKKVKKKGAKEKKDSCKIRRNSSSTPSTSDEIVMAHKRGKSIKLHASKASKASPGMEKSTSQGGTKPCAEPMENSDKSDRDGDQAEASSICSIDQLATSVNESLRWDGVLEDPVAEEERIKLYKLNRQLRYLAAQNTTRKEVQFCQKDFSNSQSQKDNPYIITSKMYQQLASKDHANSYFMGQRT
SIO_010081: c28h17orf97
subclass of: SO_0000673
so part of: c28h17orf97
location: complement(join(4639585..4640039,4644993..4645167))
location: region:4639585-4645167:-1
so has part: feature:4644993-4645167:-1:exon
so has part: feature:4639585-4640039:-1:exon

XP_032901519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4644993-4645167:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4639585-4640039:-1:exon

exo5
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: exo5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4646096..4660840
location: region:4646096-4660840:1
so has part: feature:4646096-4660840:1:exon
subclass of: SO_0000010

116988756
type: Gene
SIO_000068: ncbigene

position:4646096:1
position: 4646096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4660840:1
position: 4660840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4646096-4660840:1:exon

exo5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: exo5
product: exonuclease 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033045626.1
SIO_010081: exo5
subclass of: SO_0000673
so part of: exo5
location: join(4646096..4646161,4648475..4648562,4652893..4653158,4655648..4655752,4657225..4657397,4659028..4660840)
location: region:4646096-4660840:1
so has part: feature:4646096-4646161:1:exon
so has part: feature:4648475-4648562:1:exon
so has part: feature:4652893-4653158:1:exon
so has part: feature:4655648-4655752:1:exon
so has part: feature:4657225-4657397:1:exon
so has part: feature:4659028-4660840:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4646096-4646161:1:exon

position:4646161:1
position: 4646161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4648475-4648562:1:exon

position:4648475:1
position: 4648475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4648562:1
position: 4648562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4652893-4653158:1:exon

position:4652893:1
position: 4652893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4653158:1
position: 4653158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4655648-4655752:1:exon

position:4655648:1
position: 4655648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4655752:1
position: 4655752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4657225-4657397:1:exon

position:4657225:1
position: 4657225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4657397:1
position: 4657397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4659028-4660840:1:exon

position:4659028:1
position: 4659028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

exo5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: exo5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exonuclease V isoform X1
translation: MRRREVGAGGAASPGKPERCEGDDAHTLYRSSESDQGTDTASCSEHQQSPSQLSMSGSGGDPQCEGNSNKRRRQDNGTPLERFDRKHLSVTDLSRQAWCEQQVVYGLELPHILQLRDDAPVVKAGSSIHLARELEIQDIVPINIESREDSWAVKLLNFLSMIQFLQAGERVRELPVFGEVEGILLVGVIDELCYSPSGELELRELKTRAQPTFPSAAQRKSHHLQVSVYKLLFEALVKGQLKKDTIVQHLQLQTERSFGSEVMLHAKKMGLFVNTFGELLDLIFLNLMYIEIPTIDVLKIEYCYQADASVIGTEVVRFEEKQVVKELKHYCSFWKGQREAQGVDIEEAWKCRSCDFADICQWREKKAEEAVERNRANHRK
SIO_010081: exo5
subclass of: SO_0000673
so part of: exo5
location: join(4646119..4646161,4648475..4648562,4652893..4653158,4655648..4655752,4657225..4657397,4659028..4659495)
location: region:4646119-4659495:1
so has part: feature:4646119-4646161:1:exon
so has part: feature:4648475-4648562:1:exon
so has part: feature:4652893-4653158:1:exon
so has part: feature:4655648-4655752:1:exon
so has part: feature:4657225-4657397:1:exon
so has part: feature:4659028-4659495:1:exon

XP_032901517.1
type: Protein
SIO_000068: ncbiprotein

position:4646119:1
position: 4646119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4659495:1
position: 4659495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4646119-4646161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4648475-4648562:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4652893-4653158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4655648-4655752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4657225-4657397:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4659028-4659495:1:exon