Amblyraja radiata isolate CabotCenter1 chromosome 27, sAmbRad1.1.pri, whole genome shotgun sequence.
type: Entry
definition: Amblyraja radiata isolate CabotCenter1 chromosome 27, sAmbRad1.1.pri, whole genome shotgun sequence.
sequence version: NC_045982.1
sequence date: 2021-04-05
sequence: sequence
division: CON
label: NC_045982.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA610638
dblink: SAMN09948523
keyword: WGS
keyword: RefSeq
source: Amblyraja radiata (thorny skate)
organism: Amblyraja radiata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Amblyraja.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021392.1.\nAssembly name: sAmbRad1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/21. The original whole-genome shotgun project has the\naccession JAAGWR000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 13-JAN-2020\nAssembly Method :: Canu v. 1.7; purge_haplotigs v. bitbucket\n 7.10.2018; scaff10x v. 4.1.0; Bionano\n Solve DLS v. 3.3; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes Illumina polishing v.\n 1.3.1; purge_dups v.\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n gEVAL manual curation v. 2020-01-13; VGP\n assembly pipeline v. 1.5\nAssembly Name :: sAmbRad1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 128.24x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Amblyraja radiata Updated Annotation\n Release 100.20210331\nAnnotation Version :: 100.20210331\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 36920888
topology: linear
so has quality: SO_0000987
location: 1..36920888
location: region:1-36920888:1
RO_0002162: 386614

NC_045982
type: RefSeq
SIO_000068: refseq

PRJNA610638
type: BioProject
SIO_000068: bioproject

SAMN09948523
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36920888:1
position: 36920888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-36920888:1:source
so part of: sequence
organism: Amblyraja radiata
mol type: genomic DNA
isolate: CabotCenter1
chromosome: 27
sex: male
tissue type: testis, liver
country: USA: Gulf of Main
lat lon: 43.1336 N 68.3266 W
collection date: 2017-09-18
collected by: Jeff Kneebone

386614
type: Taxonomy
SIO_000068: taxonomy

LOC116988650
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17899..20270)
location: region:17899-20270:-1
so has part: feature:17899-20270:-1:exon
subclass of: SO_0000011

116988650
type: Gene
SIO_000068: ncbigene

position:17899:-1
position: 17899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20270:-1
position: 20270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17899-20270:-1:exon

LOC116988650
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988650
product: uncharacterized LOC116988650
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004416013.1
SIO_010081: LOC116988650
subclass of: SO_0000673
so part of: LOC116988650
location: complement(join(17899..17957,19724..19777,20200..20270))
location: region:17899-20270:-1
so has part: feature:20200-20270:-1:exon
so has part: feature:19724-19777:-1:exon
so has part: feature:17899-17957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20200-20270:-1:exon

position:20200:-1
position: 20200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19724-19777:-1:exon

position:19724:-1
position: 19724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19777:-1
position: 19777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17899-17957:-1:exon

position:17957:-1
position: 17957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tmem39b
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tmem39b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 43159..84327
location: region:43159-84327:1
so has part: feature:43159-84327:1:exon
subclass of: SO_0000010

116988257
type: Gene
SIO_000068: ncbigene

position:43159:1
position: 43159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84327:1
position: 84327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43159-84327:1:exon

tmem39b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tmem39b
product: transmembrane protein 39B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_033044791.1
SIO_010081: tmem39b
subclass of: SO_0000673
so part of: tmem39b
location: join(43159..43388,44450..44636,47436..47655,50286..50369,59146..59300,67475..67808,75918..76105,76691..76811,83984..84327)
location: region:43159-84327:1
so has part: feature:43159-43388:1:exon
so has part: feature:44450-44636:1:exon
so has part: feature:47436-47655:1:exon
so has part: feature:50286-50369:1:exon
so has part: feature:59146-59300:1:exon
so has part: feature:67475-67808:1:exon
so has part: feature:75918-76105:1:exon
so has part: feature:76691-76811:1:exon
so has part: feature:83984-84327:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43159-43388:1:exon

position:43388:1
position: 43388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:44450-44636:1:exon

position:44450:1
position: 44450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44636:1
position: 44636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:47436-47655:1:exon

position:47436:1
position: 47436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47655:1
position: 47655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:50286-50369:1:exon

position:50286:1
position: 50286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50369:1
position: 50369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:59146-59300:1:exon

position:59146:1
position: 59146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59300:1
position: 59300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:67475-67808:1:exon

position:67475:1
position: 67475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67808:1
position: 67808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:75918-76105:1:exon

position:75918:1
position: 75918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76105:1
position: 76105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:76691-76811:1:exon

position:76691:1
position: 76691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76811:1
position: 76811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:83984-84327:1:exon

position:83984:1
position: 83984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem39b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tmem39b
product: transmembrane protein 39B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033044793.1
SIO_010081: tmem39b
subclass of: SO_0000673
so part of: tmem39b
location: join(43247..43388,44450..44636,47436..47655,50286..50369,59146..59300,67475..67808,75918..76105,76691..76811,80301..80360,83984..84208)
location: region:43247-84208:1
so has part: feature:43247-43388:1:exon
so has part: feature:44450-44636:1:exon
so has part: feature:47436-47655:1:exon
so has part: feature:50286-50369:1:exon
so has part: feature:59146-59300:1:exon
so has part: feature:67475-67808:1:exon
so has part: feature:75918-76105:1:exon
so has part: feature:76691-76811:1:exon
so has part: feature:80301-80360:1:exon
so has part: feature:83984-84208:1:exon

position:43247:1
position: 43247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84208:1
position: 84208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43247-43388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44450-44636:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47436-47655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50286-50369:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59146-59300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67475-67808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75918-76105:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76691-76811:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:80301-80360:1:exon

position:80301:1
position: 80301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80360:1
position: 80360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:83984-84208:1:exon

tmem39b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tmem39b
product: transmembrane protein 39B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033044794.1
SIO_010081: tmem39b
subclass of: SO_0000673
so part of: tmem39b
location: join(43247..43388,44450..44636,47436..47655,50286..50369,59146..59300,67475..67808,75918..76105,76691..76811,83382..83599)
location: region:43247-83599:1
so has part: feature:43247-43388:1:exon
so has part: feature:44450-44636:1:exon
so has part: feature:47436-47655:1:exon
so has part: feature:50286-50369:1:exon
so has part: feature:59146-59300:1:exon
so has part: feature:67475-67808:1:exon
so has part: feature:75918-76105:1:exon
so has part: feature:76691-76811:1:exon
so has part: feature:83382-83599:1:exon

position:83599:1
position: 83599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43247-43388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44450-44636:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47436-47655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50286-50369:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59146-59300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67475-67808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75918-76105:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76691-76811:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83382-83599:1:exon

position:83382:1
position: 83382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem39b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tmem39b
product: transmembrane protein 39B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033044795.1
SIO_010081: tmem39b
subclass of: SO_0000673
so part of: tmem39b
location: join(43247..43388,44450..44636,47436..47655,50286..50369,59146..59300,67475..67808,75918..76105,76691..76811,81676..81849)
location: region:43247-81849:1
so has part: feature:43247-43388:1:exon
so has part: feature:44450-44636:1:exon
so has part: feature:47436-47655:1:exon
so has part: feature:50286-50369:1:exon
so has part: feature:59146-59300:1:exon
so has part: feature:67475-67808:1:exon
so has part: feature:75918-76105:1:exon
so has part: feature:76691-76811:1:exon
so has part: feature:81676-81849:1:exon

position:81849:1
position: 81849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43247-43388:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44450-44636:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47436-47655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50286-50369:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59146-59300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67475-67808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75918-76105:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76691-76811:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:81676-81849:1:exon

position:81676:1
position: 81676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem39b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tmem39b
product: transmembrane protein 39B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033044790.1
SIO_010081: tmem39b
subclass of: SO_0000673
so part of: tmem39b
location: join(43695..43713,44450..44636,47436..47655,50286..50369,59146..59300,67475..67808,75918..76105,76691..76811,83984..84327)
location: region:43695-84327:1
so has part: feature:43695-43713:1:exon
so has part: feature:44450-44636:1:exon
so has part: feature:47436-47655:1:exon
so has part: feature:50286-50369:1:exon
so has part: feature:59146-59300:1:exon
so has part: feature:67475-67808:1:exon
so has part: feature:75918-76105:1:exon
so has part: feature:76691-76811:1:exon
so has part: feature:83984-84327:1:exon

position:43695:1
position: 43695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43695-43713:1:exon

position:43713:1
position: 43713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:44450-44636:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47436-47655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50286-50369:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59146-59300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67475-67808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75918-76105:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76691-76811:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83984-84327:1:exon

tmem39b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tmem39b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 39B isoform X1
translation: MQDKTSRVKSKVSSFGMAGGRRGPSRTSYCRTPLNESGTLGGSGYSTSSPITGVRSRTRSGSGTGLTSPPLATQTVIPLKHSKIPELPLEKSVLFELHLLFCHLIAVFVHYINIYKTVWWYPPAHPPSFTSLNFHLIDHNLLILITIVLARRFIIAVVKEASHGGKISVPQSVIFVTTRFAVLTGTGWSLCRSLIYLFRTYSFLNLLFLCYPFGMYIPFFRLKYNAKKSNLSSVANIGPNETITAVERSKDYLTVLKETLKNHTNQLHSLNSMPTHACCLSPDLIRNEVEHLKMDFNWRMKEVLVNAMLSAYYIAFVPVWFIKSTQYYDKRWSCELFILVWVSTCVILTRHLLPPRYCDLLHKAASHLGCWQKVDPTLCSNVLQHPWSEEYMWPQGVLVKHNKNVYKAMGNYNVAIPSDVSHFRFYFFFNKPLRILNILIIIEGLVILYQLYSLICSEKWHQTISLALILFSNYYAFFKLLRDRIVLGKAYSYSASGNSESKVN
SIO_010081: tmem39b
subclass of: SO_0000673
so part of: tmem39b
location: join(44461..44636,47436..47655,50286..50369,59146..59300,67475..67808,75918..76105,76691..76811,83984..84220)
location: region:44461-84220:1
so has part: feature:44461-44636:1:exon
so has part: feature:47436-47655:1:exon
so has part: feature:50286-50369:1:exon
so has part: feature:59146-59300:1:exon
so has part: feature:67475-67808:1:exon
so has part: feature:75918-76105:1:exon
so has part: feature:76691-76811:1:exon
so has part: feature:83984-84220:1:exon

XP_032900681.1
type: Protein
SIO_000068: ncbiprotein

position:44461:1
position: 44461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84220:1
position: 84220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44461-44636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47436-47655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50286-50369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59146-59300:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67475-67808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75918-76105:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76691-76811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83984-84220:1:exon

tmem39b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tmem39b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 39B isoform X1
translation: MQDKTSRVKSKVSSFGMAGGRRGPSRTSYCRTPLNESGTLGGSGYSTSSPITGVRSRTRSGSGTGLTSPPLATQTVIPLKHSKIPELPLEKSVLFELHLLFCHLIAVFVHYINIYKTVWWYPPAHPPSFTSLNFHLIDHNLLILITIVLARRFIIAVVKEASHGGKISVPQSVIFVTTRFAVLTGTGWSLCRSLIYLFRTYSFLNLLFLCYPFGMYIPFFRLKYNAKKSNLSSVANIGPNETITAVERSKDYLTVLKETLKNHTNQLHSLNSMPTHACCLSPDLIRNEVEHLKMDFNWRMKEVLVNAMLSAYYIAFVPVWFIKSTQYYDKRWSCELFILVWVSTCVILTRHLLPPRYCDLLHKAASHLGCWQKVDPTLCSNVLQHPWSEEYMWPQGVLVKHNKNVYKAMGNYNVAIPSDVSHFRFYFFFNKPLRILNILIIIEGLVILYQLYSLICSEKWHQTISLALILFSNYYAFFKLLRDRIVLGKAYSYSASGNSESKVN
SIO_010081: tmem39b
subclass of: SO_0000673
so part of: tmem39b
location: join(44461..44636,47436..47655,50286..50369,59146..59300,67475..67808,75918..76105,76691..76811,83984..84220)
location: region:44461-84220:1
so has part: feature:44461-44636:1:exon
so has part: feature:47436-47655:1:exon
so has part: feature:50286-50369:1:exon
so has part: feature:59146-59300:1:exon
so has part: feature:67475-67808:1:exon
so has part: feature:75918-76105:1:exon
so has part: feature:76691-76811:1:exon
so has part: feature:83984-84220:1:exon

XP_032900682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44461-44636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47436-47655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50286-50369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59146-59300:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67475-67808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75918-76105:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76691-76811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83984-84220:1:exon

tmem39b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tmem39b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 39B isoform X3
translation: MQDKTSRVKSKVSSFGMAGGRRGPSRTSYCRTPLNESGTLGGSGYSTSSPITGVRSRTRSGSGTGLTSPPLATQTVIPLKHSKIPELPLEKSVLFELHLLFCHLIAVFVHYINIYKTVWWYPPAHPPSFTSLNFHLIDHNLLILITIVLARRFIIAVVKEASHGGKISVPQSVIFVTTRFAVLTGTGWSLCRSLIYLFRTYSFLNLLFLCYPFGMYIPFFRLKYNAKKSNLSSVANIGPNETITAVERSKDYLTVLKETLKNHTNQLHSLNSMPTHACCLSPDLIRNEVEHLKMDFNWRMKEVLVNAMLSAYYIAFVPVWFIKSTQYYDKRWSCELFILVWVSTCVILTRHLLPPRYCDLLHKAASHLGCWQKVDPTLCSNVLQHPWSEEYMWPQGVLVKHNKNVYKAMGNYNVAIPSDVSHFRFYTPSW
SIO_010081: tmem39b
subclass of: SO_0000673
so part of: tmem39b
location: join(44461..44636,47436..47655,50286..50369,59146..59300,67475..67808,75918..76105,76691..76811,83382..83396)
location: region:44461-83396:1
so has part: feature:44461-44636:1:exon
so has part: feature:47436-47655:1:exon
so has part: feature:50286-50369:1:exon
so has part: feature:59146-59300:1:exon
so has part: feature:67475-67808:1:exon
so has part: feature:75918-76105:1:exon
so has part: feature:76691-76811:1:exon
so has part: feature:83382-83396:1:exon

XP_032900685.1
type: Protein
SIO_000068: ncbiprotein

position:83396:1
position: 83396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44461-44636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47436-47655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50286-50369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59146-59300:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67475-67808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75918-76105:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76691-76811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83382-83396:1:exon

tmem39b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tmem39b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 39B isoform X4
translation: MQDKTSRVKSKVSSFGMAGGRRGPSRTSYCRTPLNESGTLGGSGYSTSSPITGVRSRTRSGSGTGLTSPPLATQTVIPLKHSKIPELPLEKSVLFELHLLFCHLIAVFVHYINIYKTVWWYPPAHPPSFTSLNFHLIDHNLLILITIVLARRFIIAVVKEASHGGKISVPQSVIFVTTRFAVLTGTGWSLCRSLIYLFRTYSFLNLLFLCYPFGMYIPFFRLKYNAKKSNLSSVANIGPNETITAVERSKDYLTVLKETLKNHTNQLHSLNSMPTHACCLSPDLIRNEVEHLKMDFNWRMKEVLVNAMLSAYYIAFVPVWFIKSTQYYDKRWSCELFILVWVSTCVILTRHLLPPRYCDLLHKAASHLGCWQKVDPTLCSNVLQHPWSEEYMWPQGVLVKHNKNVYKAMGNYNVAIPSDVSHFRFYV
SIO_010081: tmem39b
subclass of: SO_0000673
so part of: tmem39b
location: join(44461..44636,47436..47655,50286..50369,59146..59300,67475..67808,75918..76105,76691..76811,81676..81681)
location: region:44461-81681:1
so has part: feature:44461-44636:1:exon
so has part: feature:47436-47655:1:exon
so has part: feature:50286-50369:1:exon
so has part: feature:59146-59300:1:exon
so has part: feature:67475-67808:1:exon
so has part: feature:75918-76105:1:exon
so has part: feature:76691-76811:1:exon
so has part: feature:81676-81681:1:exon

XP_032900686.1
type: Protein
SIO_000068: ncbiprotein

position:81681:1
position: 81681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44461-44636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47436-47655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50286-50369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59146-59300:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67475-67808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75918-76105:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76691-76811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:81676-81681:1:exon

tmem39b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tmem39b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 39B isoform X2
translation: MQDKTSRVKSKVSSFGMAGGRRGPSRTSYCRTPLNESGTLGGSGYSTSSPITGVRSRTRSGSGTGLTSPPLATQTVIPLKHSKIPELPLEKSVLFELHLLFCHLIAVFVHYINIYKTVWWYPPAHPPSFTSLNFHLIDHNLLILITIVLARRFIIAVVKEASHGGKISVPQSVIFVTTRFAVLTGTGWSLCRSLIYLFRTYSFLNLLFLCYPFGMYIPFFRLKYNAKKSNLSSVANIGPNETITAVERSKDYLTVLKETLKNHTNQLHSLNSMPTHACCLSPDLIRNEVEHLKMDFNWRMKEVLVNAMLSAYYIAFVPVWFIKSTQYYDKRWSCELFILVWVSTCVILTRHLLPPRYCDLLHKAASHLGCWQKVDPTLCSNVLQHPWSEEYMWPQGVLVKHNKNVYKAMGNYNVAIPSDVSHFRFYLLRHS
SIO_010081: tmem39b
subclass of: SO_0000673
so part of: tmem39b
location: join(44461..44636,47436..47655,50286..50369,59146..59300,67475..67808,75918..76105,76691..76811,80301..80318)
location: region:44461-80318:1
so has part: feature:44461-44636:1:exon
so has part: feature:47436-47655:1:exon
so has part: feature:50286-50369:1:exon
so has part: feature:59146-59300:1:exon
so has part: feature:67475-67808:1:exon
so has part: feature:75918-76105:1:exon
so has part: feature:76691-76811:1:exon
so has part: feature:80301-80318:1:exon

XP_032900684.1
type: Protein
SIO_000068: ncbiprotein

position:80318:1
position: 80318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44461-44636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47436-47655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50286-50369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59146-59300:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67475-67808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75918-76105:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76691-76811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:80301-80318:1:exon

kpna6
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: kpna6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 89477..162090
location: region:89477-162090:1
so has part: feature:89477-162090:1:exon
subclass of: SO_0000010

116988258
type: Gene
SIO_000068: ncbigene

position:89477:1
position: 89477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162090:1
position: 162090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89477-162090:1:exon

kpna6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kpna6
product: karyopherin subunit alpha 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033044797.1
SIO_010081: kpna6
subclass of: SO_0000673
so part of: kpna6
location: join(89477..89557,108648..108781,111340..111435,122239..122338,128011..128105,136267..136398,144939..145027,146301..146400,146745..146908,147705..147783,152559..152684,153507..153634,156566..156744,156836..162090)
location: region:89477-162090:1
so has part: feature:89477-89557:1:exon
so has part: feature:108648-108781:1:exon
so has part: feature:111340-111435:1:exon
so has part: feature:122239-122338:1:exon
so has part: feature:128011-128105:1:exon
so has part: feature:136267-136398:1:exon
so has part: feature:144939-145027:1:exon
so has part: feature:146301-146400:1:exon
so has part: feature:146745-146908:1:exon
so has part: feature:147705-147783:1:exon
so has part: feature:152559-152684:1:exon
so has part: feature:153507-153634:1:exon
so has part: feature:156566-156744:1:exon
so has part: feature:156836-162090:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89477-89557:1:exon

position:89557:1
position: 89557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108648-108781:1:exon

position:108648:1
position: 108648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108781:1
position: 108781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:111340-111435:1:exon

position:111340:1
position: 111340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111435:1
position: 111435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:122239-122338:1:exon

position:122239:1
position: 122239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122338:1
position: 122338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:128011-128105:1:exon

position:128011:1
position: 128011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128105:1
position: 128105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:136267-136398:1:exon

position:136267:1
position: 136267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136398:1
position: 136398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:144939-145027:1:exon

position:144939:1
position: 144939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145027:1
position: 145027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:146301-146400:1:exon

position:146301:1
position: 146301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146400:1
position: 146400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:146745-146908:1:exon

position:146745:1
position: 146745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146908:1
position: 146908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:147705-147783:1:exon

position:147705:1
position: 147705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147783:1
position: 147783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:152559-152684:1:exon

position:152559:1
position: 152559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152684:1
position: 152684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:153507-153634:1:exon

position:153507:1
position: 153507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153634:1
position: 153634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:156566-156744:1:exon

position:156566:1
position: 156566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156744:1
position: 156744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:156836-162090:1:exon

position:156836:1
position: 156836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

kpna6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kpna6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin subunit alpha-7 isoform X2
translation: METTSSPTKENYRMNRYKNKALNPEEMRRRREEEGIQLRKQKREQQLFKRRNVELINEESAVFDSPLLDSFVSSSAAGEGMITREMVQMLFSDDTELQLATTQKFRKLLSKEPNPPIDEVINTSGVVERFVEFLKRNENCTLQFEAAWALTNIASGTSLQTKVVIEAGAVPIFIKLLNSEFEDVQEQAVWALGNIAGDSAVCRDFVLHCGILPPLLQLLTKSNRLTMTRNAVWALSNLCRGKNPPPDFEKVSPCLAVLSRLLFSGDPDLLADACWALSYLSDGPNEKIQSVIDSGICRRLVELLMHNDYKVASPALRAVGNIVTGDDVQTQVILNCSALPCLLHLLSSPKESIRKEACWTISNITAGNRAQIQAVIDASIFPVLIDLLQKAEFRTRKEAAWGITNSTSGGTPEQIQYLVNLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKQNGTGINPYCNLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEEEDSSIAPQVDESAQQFLFQQQEAPMEGFQL
SIO_010081: kpna6
subclass of: SO_0000673
so part of: kpna6
location: join(89554..89557,108648..108781,111340..111435,122239..122338,128011..128105,136267..136398,144939..145027,146301..146400,146745..146908,147705..147783,152559..152684,153507..153634,156566..156744,156836..157023)
location: region:89554-157023:1
so has part: feature:89554-89557:1:exon
so has part: feature:108648-108781:1:exon
so has part: feature:111340-111435:1:exon
so has part: feature:122239-122338:1:exon
so has part: feature:128011-128105:1:exon
so has part: feature:136267-136398:1:exon
so has part: feature:144939-145027:1:exon
so has part: feature:146301-146400:1:exon
so has part: feature:146745-146908:1:exon
so has part: feature:147705-147783:1:exon
so has part: feature:152559-152684:1:exon
so has part: feature:153507-153634:1:exon
so has part: feature:156566-156744:1:exon
so has part: feature:156836-157023:1:exon

XP_032900688.1
type: Protein
SIO_000068: ncbiprotein

position:89554:1
position: 89554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157023:1
position: 157023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89554-89557:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108648-108781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111340-111435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122239-122338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128011-128105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136267-136398:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144939-145027:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146301-146400:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146745-146908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147705-147783:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152559-152684:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153507-153634:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:156566-156744:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:156836-157023:1:exon

kpna6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kpna6
product: karyopherin subunit alpha 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033044798.1
SIO_010081: kpna6
subclass of: SO_0000673
so part of: kpna6
location: join(90965..90970,108648..108781,111340..111435,122239..122338,128011..128105,136267..136398,144939..145027,146301..146400,146745..146908,147705..147783,152559..152684,153507..153634,156566..156744,156836..162090)
location: region:90965-162090:1
so has part: feature:90965-90970:1:exon
so has part: feature:108648-108781:1:exon
so has part: feature:111340-111435:1:exon
so has part: feature:122239-122338:1:exon
so has part: feature:128011-128105:1:exon
so has part: feature:136267-136398:1:exon
so has part: feature:144939-145027:1:exon
so has part: feature:146301-146400:1:exon
so has part: feature:146745-146908:1:exon
so has part: feature:147705-147783:1:exon
so has part: feature:152559-152684:1:exon
so has part: feature:153507-153634:1:exon
so has part: feature:156566-156744:1:exon
so has part: feature:156836-162090:1:exon

position:90965:1
position: 90965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90965-90970:1:exon

position:90970:1
position: 90970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108648-108781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111340-111435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122239-122338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128011-128105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136267-136398:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144939-145027:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146301-146400:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146745-146908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147705-147783:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152559-152684:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153507-153634:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:156566-156744:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:156836-162090:1:exon

kpna6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kpna6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin subunit alpha-7 isoform X3
translation: METTSSPTKENYRMNRYKNKALNPEEMRRRREEEGIQLRKQKREQQLFKRRNVELINEESAVFDSPLLDSFVSSSAAGEGMITREMVQMLFSDDTELQLATTQKFRKLLSKEPNPPIDEVINTSGVVERFVEFLKRNENCTLQFEAAWALTNIASGTSLQTKVVIEAGAVPIFIKLLNSEFEDVQEQAVWALGNIAGDSAVCRDFVLHCGILPPLLQLLTKSNRLTMTRNAVWALSNLCRGKNPPPDFEKVSPCLAVLSRLLFSGDPDLLADACWALSYLSDGPNEKIQSVIDSGICRRLVELLMHNDYKVASPALRAVGNIVTGDDVQTQVILNCSALPCLLHLLSSPKESIRKEACWTISNITAGNRAQIQAVIDASIFPVLIDLLQKAEFRTRKEAAWGITNSTSGGTPEQIQYLVNLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKQNGTGINPYCNLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEEEDSSIAPQVDESAQQFLFQQQEAPMEGFQL
SIO_010081: kpna6
subclass of: SO_0000673
so part of: kpna6
location: join(90967..90970,108648..108781,111340..111435,122239..122338,128011..128105,136267..136398,144939..145027,146301..146400,146745..146908,147705..147783,152559..152684,153507..153634,156566..156744,156836..157023)
location: region:90967-157023:1
so has part: feature:90967-90970:1:exon
so has part: feature:108648-108781:1:exon
so has part: feature:111340-111435:1:exon
so has part: feature:122239-122338:1:exon
so has part: feature:128011-128105:1:exon
so has part: feature:136267-136398:1:exon
so has part: feature:144939-145027:1:exon
so has part: feature:146301-146400:1:exon
so has part: feature:146745-146908:1:exon
so has part: feature:147705-147783:1:exon
so has part: feature:152559-152684:1:exon
so has part: feature:153507-153634:1:exon
so has part: feature:156566-156744:1:exon
so has part: feature:156836-157023:1:exon

XP_032900689.1
type: Protein
SIO_000068: ncbiprotein

position:90967:1
position: 90967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90967-90970:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108648-108781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111340-111435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122239-122338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128011-128105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136267-136398:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144939-145027:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146301-146400:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146745-146908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147705-147783:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152559-152684:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153507-153634:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:156566-156744:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:156836-157023:1:exon

kpna6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kpna6
product: karyopherin subunit alpha 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033044796.1
SIO_010081: kpna6
subclass of: SO_0000673
so part of: kpna6
location: join(100164..100668,108648..108781,111340..111435,122239..122338,128011..128105,136267..136398,144939..145027,146301..146400,146745..146908,147705..147783,152559..152684,153507..153634,156566..156744,156836..162090)
location: region:100164-162090:1
so has part: feature:100164-100668:1:exon
so has part: feature:108648-108781:1:exon
so has part: feature:111340-111435:1:exon
so has part: feature:122239-122338:1:exon
so has part: feature:128011-128105:1:exon
so has part: feature:136267-136398:1:exon
so has part: feature:144939-145027:1:exon
so has part: feature:146301-146400:1:exon
so has part: feature:146745-146908:1:exon
so has part: feature:147705-147783:1:exon
so has part: feature:152559-152684:1:exon
so has part: feature:153507-153634:1:exon
so has part: feature:156566-156744:1:exon
so has part: feature:156836-162090:1:exon

position:100164:1
position: 100164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100164-100668:1:exon

position:100668:1
position: 100668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108648-108781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111340-111435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122239-122338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128011-128105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136267-136398:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144939-145027:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146301-146400:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146745-146908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147705-147783:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152559-152684:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153507-153634:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:156566-156744:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:156836-162090:1:exon

kpna6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kpna6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin subunit alpha-7 isoform X1
translation: MLLETTSSPTKENYRMNRYKNKALNPEEMRRRREEEGIQLRKQKREQQLFKRRNVELINEESAVFDSPLLDSFVSSSAAGEGMITREMVQMLFSDDTELQLATTQKFRKLLSKEPNPPIDEVINTSGVVERFVEFLKRNENCTLQFEAAWALTNIASGTSLQTKVVIEAGAVPIFIKLLNSEFEDVQEQAVWALGNIAGDSAVCRDFVLHCGILPPLLQLLTKSNRLTMTRNAVWALSNLCRGKNPPPDFEKVSPCLAVLSRLLFSGDPDLLADACWALSYLSDGPNEKIQSVIDSGICRRLVELLMHNDYKVASPALRAVGNIVTGDDVQTQVILNCSALPCLLHLLSSPKESIRKEACWTISNITAGNRAQIQAVIDASIFPVLIDLLQKAEFRTRKEAAWGITNSTSGGTPEQIQYLVNLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKQNGTGINPYCNLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEEEDSSIAPQVDESAQQFLFQQQEAPMEGFQL
SIO_010081: kpna6
subclass of: SO_0000673
so part of: kpna6
location: join(100659..100668,108648..108781,111340..111435,122239..122338,128011..128105,136267..136398,144939..145027,146301..146400,146745..146908,147705..147783,152559..152684,153507..153634,156566..156744,156836..157023)
location: region:100659-157023:1
so has part: feature:100659-100668:1:exon
so has part: feature:108648-108781:1:exon
so has part: feature:111340-111435:1:exon
so has part: feature:122239-122338:1:exon
so has part: feature:128011-128105:1:exon
so has part: feature:136267-136398:1:exon
so has part: feature:144939-145027:1:exon
so has part: feature:146301-146400:1:exon
so has part: feature:146745-146908:1:exon
so has part: feature:147705-147783:1:exon
so has part: feature:152559-152684:1:exon
so has part: feature:153507-153634:1:exon
so has part: feature:156566-156744:1:exon
so has part: feature:156836-157023:1:exon

XP_032900687.1
type: Protein
SIO_000068: ncbiprotein

position:100659:1
position: 100659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100659-100668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108648-108781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111340-111435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122239-122338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128011-128105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136267-136398:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144939-145027:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146301-146400:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:146745-146908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147705-147783:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152559-152684:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153507-153634:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:156566-156744:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:156836-157023:1:exon

txlna
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: txlna
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 179848..214870
location: region:179848-214870:1
so has part: feature:179848-214870:1:exon
subclass of: SO_0000010

116988259
type: Gene
SIO_000068: ncbigene

position:179848:1
position: 179848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214870:1
position: 214870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179848-214870:1:exon

txlna
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: txlna
product: taxilin alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033044799.1
SIO_010081: txlna
subclass of: SO_0000673
so part of: txlna
location: join(179848..180014,183844..183921,188017..188639,195308..195399,197035..197205,198087..198281,203312..203431,207845..207919,209014..209106,210108..210203,213373..214870)
location: region:179848-214870:1
so has part: feature:179848-180014:1:exon
so has part: feature:183844-183921:1:exon
so has part: feature:188017-188639:1:exon
so has part: feature:195308-195399:1:exon
so has part: feature:197035-197205:1:exon
so has part: feature:198087-198281:1:exon
so has part: feature:203312-203431:1:exon
so has part: feature:207845-207919:1:exon
so has part: feature:209014-209106:1:exon
so has part: feature:210108-210203:1:exon
so has part: feature:213373-214870:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179848-180014:1:exon

position:180014:1
position: 180014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183844-183921:1:exon

position:183844:1
position: 183844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183921:1
position: 183921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:188017-188639:1:exon

position:188017:1
position: 188017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188639:1
position: 188639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195308-195399:1:exon

position:195308:1
position: 195308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195399:1
position: 195399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:197035-197205:1:exon

position:197035:1
position: 197035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197205:1
position: 197205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:198087-198281:1:exon

position:198087:1
position: 198087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198281:1
position: 198281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:203312-203431:1:exon

position:203312:1
position: 203312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203431:1
position: 203431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:207845-207919:1:exon

position:207845:1
position: 207845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207919:1
position: 207919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:209014-209106:1:exon

position:209014:1
position: 209014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209106:1
position: 209106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:210108-210203:1:exon

position:210108:1
position: 210108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210203:1
position: 210203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:213373-214870:1:exon

position:213373:1
position: 213373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988199
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(179855..180724)
location: region:179855-180724:-1
so has part: feature:179855-180724:-1:exon
subclass of: SO_0000010

116988199
type: Gene
SIO_000068: ncbigene

position:179855:-1
position: 179855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180724:-1
position: 180724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179855-180724:-1:exon

LOC116988199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988199
product: extensin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_033044749.1
SIO_010081: LOC116988199
subclass of: SO_0000673
so part of: LOC116988199
location: complement(179855..180724)
location: region:179855-180724:-1
so has part: feature:179855-180724:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179855-180724:-1:exon

LOC116988199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extensin-like
translation: MCPGVPQSPCTSPRVPHPTAPTDHSPRVPQSPCTSPRVSRCTTDPMCPRVPQSPCTTVPVWPRVPQSPCTTVPVCLRVPHPTVPVYHRPHVSRCTTVPVCQSPCTPPHGPHRPQSPCTTVPVYQSPCVPVYHRPRVSPCTTVPVYHRPCVSPCTTDPVCPRVPVPVYHIPRVSPCTIDPMCPGVPQSPCTPPHTPRPPQTTDPVCPRVPQTPCTTVPVYPTHPTPHGPHRPQAPVPTTERPLSFLRNFQLGDGSEWTSRRILLTSTDPTARCCVTIAPGQRALPPGLDP
SIO_010081: LOC116988199
subclass of: SO_0000673
so part of: LOC116988199
location: complement(179855..180724)
location: region:179855-180724:-1
so has part: feature:179855-180724:-1:exon

XP_032900640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179855-180724:-1:exon

txlna
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: txlna
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-taxilin
translation: MKNQDSESKLSPSAGGLEALVRVTAAEGAEDKLSVLESAGLETICQTIEKSGGQNGVVQNHDNIRPNEDVLKQTQTGNSSEASLVVQETSTTNNLNSVQSETSTSDVSDELSRQLEDILNTYCCTLDEHGSSVQPEESPELEELEKCANNESLRNGVREIECEVMNEETEKVVKAVADVKENGVAPNNKDQKKPPEKKKAKALGKEITLLMQTLNTLSTPEEKLAALCKKYADMLEEHRNTQKQMRLLQKKQTQIIQEKDHLRNEHSKAILARSKLESLCRELQRHNRTLKEEGVQRGRDEEEKRKEITSHFQVTLNDIQAQMEQHNERNSKLRQENMELAEKLKKLIEQYELREEHIDKVFKHKDLQQQLIDAKLQQAQELLKEAAEKHQKEKDYLLRETVESQRMCELMKQQEVHLKQQLALYTGKFEEFQTTLSKSNEVFTTFRQEMEKMTKKIKKLEKETTMYRSRWESSNKALLDMVEEKTQRDKEFENLQIKIQRLEKLCRALQTERNDLNKKVHDLSVQTTHEGHDREAGGNDSLCFSNVPQDYQSPQSTPGVSVKADCPIQEIQLSPEVCPCATEQMQSPLFTENLEESKIEASSNQPELLSSNSSLE
SIO_010081: txlna
subclass of: SO_0000673
so part of: txlna
location: join(188030..188639,195308..195399,197035..197205,198087..198281,203312..203431,207845..207919,209014..209106,210108..210203,213373..213771)
location: region:188030-213771:1
so has part: feature:188030-188639:1:exon
so has part: feature:195308-195399:1:exon
so has part: feature:197035-197205:1:exon
so has part: feature:198087-198281:1:exon
so has part: feature:203312-203431:1:exon
so has part: feature:207845-207919:1:exon
so has part: feature:209014-209106:1:exon
so has part: feature:210108-210203:1:exon
so has part: feature:213373-213771:1:exon

XP_032900690.1
type: Protein
SIO_000068: ncbiprotein

position:188030:1
position: 188030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213771:1
position: 213771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188030-188639:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195308-195399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197035-197205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:198087-198281:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:203312-203431:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207845-207919:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209014-209106:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210108-210203:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:213373-213771:1:exon

ccdc28b
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ccdc28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 219078..237060
location: region:219078-237060:1
so has part: feature:219078-237060:1:exon
subclass of: SO_0000010

116988264
type: Gene
SIO_000068: ncbigene

position:219078:1
position: 219078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237060:1
position: 237060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219078-237060:1:exon

ccdc28b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ccdc28b
product: coiled-coil domain containing 28B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033044811.1
SIO_010081: ccdc28b
subclass of: SO_0000673
so part of: ccdc28b
location: join(219078..219756,220069..220133,221948..222114,227033..227196,230921..231075,233606..233628,235512..237060)
location: region:219078-237060:1
so has part: feature:219078-219756:1:exon
so has part: feature:220069-220133:1:exon
so has part: feature:221948-222114:1:exon
so has part: feature:227033-227196:1:exon
so has part: feature:230921-231075:1:exon
so has part: feature:233606-233628:1:exon
so has part: feature:235512-237060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219078-219756:1:exon

position:219756:1
position: 219756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220069-220133:1:exon

position:220069:1
position: 220069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220133:1
position: 220133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:221948-222114:1:exon

position:221948:1
position: 221948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222114:1
position: 222114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:227033-227196:1:exon

position:227033:1
position: 227033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227196:1
position: 227196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:230921-231075:1:exon

position:230921:1
position: 230921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231075:1
position: 231075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:233606-233628:1:exon

position:233606:1
position: 233606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233628:1
position: 233628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:235512-237060:1:exon

position:235512:1
position: 235512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ccdc28b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ccdc28b
product: coiled-coil domain containing 28B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033044810.1
SIO_010081: ccdc28b
subclass of: SO_0000673
so part of: ccdc28b
location: join(219078..219756,221948..222114,227033..227196,230921..231075,233606..233628,235512..237060)
location: region:219078-237060:1
so has part: feature:219078-219756:1:exon
so has part: feature:221948-222114:1:exon
so has part: feature:227033-227196:1:exon
so has part: feature:230921-231075:1:exon
so has part: feature:233606-233628:1:exon
so has part: feature:235512-237060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219078-219756:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221948-222114:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227033-227196:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230921-231075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233606-233628:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:235512-237060:1:exon

ccdc28b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ccdc28b
product: coiled-coil domain containing 28B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033044809.1
SIO_010081: ccdc28b
subclass of: SO_0000673
so part of: ccdc28b
location: join(221795..222114,227033..227196,230921..231075,233606..233628,235512..237060)
location: region:221795-237060:1
so has part: feature:221795-222114:1:exon
so has part: feature:227033-227196:1:exon
so has part: feature:230921-231075:1:exon
so has part: feature:233606-233628:1:exon
so has part: feature:235512-237060:1:exon

position:221795:1
position: 221795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221795-222114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227033-227196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230921-231075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233606-233628:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235512-237060:1:exon

ccdc28b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ccdc28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 28B
translation: MEEKIKKQTPRMTLSQHCSPRKSPVSTCQSSALCPVLPQLSSPKLKSKLKRADKGKVKTLQPAEKVLKPAAIQHSFLTDVSDVREMESGLLHLLNDFHSGNLQAFGKECSFEQMEHVREMQEKMAHLHFSLDSHVEELSEDKKKNASDRNLEQLLINLEELSTSIQKLHLAENQELPKDEELKSSPS
SIO_010081: ccdc28b
subclass of: SO_0000673
so part of: ccdc28b
location: join(221963..222114,227033..227196,230921..231075,233606..233628,235512..235581)
location: region:221963-235581:1
so has part: feature:221963-222114:1:exon
so has part: feature:227033-227196:1:exon
so has part: feature:230921-231075:1:exon
so has part: feature:233606-233628:1:exon
so has part: feature:235512-235581:1:exon

XP_032900700.1
type: Protein
SIO_000068: ncbiprotein

position:221963:1
position: 221963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235581:1
position: 235581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221963-222114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227033-227196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230921-231075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233606-233628:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235512-235581:1:exon

ccdc28b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ccdc28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 28B
translation: MEEKIKKQTPRMTLSQHCSPRKSPVSTCQSSALCPVLPQLSSPKLKSKLKRADKGKVKTLQPAEKVLKPAAIQHSFLTDVSDVREMESGLLHLLNDFHSGNLQAFGKECSFEQMEHVREMQEKMAHLHFSLDSHVEELSEDKKKNASDRNLEQLLINLEELSTSIQKLHLAENQELPKDEELKSSPS
SIO_010081: ccdc28b
subclass of: SO_0000673
so part of: ccdc28b
location: join(221963..222114,227033..227196,230921..231075,233606..233628,235512..235581)
location: region:221963-235581:1
so has part: feature:221963-222114:1:exon
so has part: feature:227033-227196:1:exon
so has part: feature:230921-231075:1:exon
so has part: feature:233606-233628:1:exon
so has part: feature:235512-235581:1:exon

XP_032900701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221963-222114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227033-227196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230921-231075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233606-233628:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235512-235581:1:exon

ccdc28b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ccdc28b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 28B
translation: MEEKIKKQTPRMTLSQHCSPRKSPVSTCQSSALCPVLPQLSSPKLKSKLKRADKGKVKTLQPAEKVLKPAAIQHSFLTDVSDVREMESGLLHLLNDFHSGNLQAFGKECSFEQMEHVREMQEKMAHLHFSLDSHVEELSEDKKKNASDRNLEQLLINLEELSTSIQKLHLAENQELPKDEELKSSPS
SIO_010081: ccdc28b
subclass of: SO_0000673
so part of: ccdc28b
location: join(221963..222114,227033..227196,230921..231075,233606..233628,235512..235581)
location: region:221963-235581:1
so has part: feature:221963-222114:1:exon
so has part: feature:227033-227196:1:exon
so has part: feature:230921-231075:1:exon
so has part: feature:233606-233628:1:exon
so has part: feature:235512-235581:1:exon

XP_032900702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221963-222114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227033-227196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230921-231075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233606-233628:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235512-235581:1:exon

rbbp4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rbbp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 250592..285231
location: region:250592-285231:1
so has part: feature:250592-285231:1:exon
subclass of: SO_0000010

116988260
type: Gene
SIO_000068: ncbigene

position:250592:1
position: 250592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285231:1
position: 285231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250592-285231:1:exon

rbbp4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rbbp4
product: RB binding protein 4, chromatin remodeling factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033044803.1
SIO_010081: rbbp4
subclass of: SO_0000673
so part of: rbbp4
location: join(250592..250724,253516..253656,253709..253710,264928..265075,266692..266837,267374..267547,270532..270647,272429..272589,274499..274625,275591..275668,276452..276528,279433..279490,282011..282121,284649..285231)
location: region:250592-285231:1
so has part: feature:250592-250724:1:exon
so has part: feature:253516-253656:1:exon
so has part: feature:253709-253710:1:exon
so has part: feature:264928-265075:1:exon
so has part: feature:266692-266837:1:exon
so has part: feature:267374-267547:1:exon
so has part: feature:270532-270647:1:exon
so has part: feature:272429-272589:1:exon
so has part: feature:274499-274625:1:exon
so has part: feature:275591-275668:1:exon
so has part: feature:276452-276528:1:exon
so has part: feature:279433-279490:1:exon
so has part: feature:282011-282121:1:exon
so has part: feature:284649-285231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250592-250724:1:exon

position:250724:1
position: 250724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:253516-253656:1:exon

position:253516:1
position: 253516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253656:1
position: 253656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:253709-253710:1:exon

position:253709:1
position: 253709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253710:1
position: 253710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:264928-265075:1:exon

position:264928:1
position: 264928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265075:1
position: 265075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:266692-266837:1:exon

position:266692:1
position: 266692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266837:1
position: 266837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:267374-267547:1:exon

position:267374:1
position: 267374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267547:1
position: 267547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:270532-270647:1:exon

position:270532:1
position: 270532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270647:1
position: 270647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:272429-272589:1:exon

position:272429:1
position: 272429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272589:1
position: 272589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:274499-274625:1:exon

position:274499:1
position: 274499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274625:1
position: 274625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:275591-275668:1:exon

position:275591:1
position: 275591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275668:1
position: 275668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:276452-276528:1:exon

position:276452:1
position: 276452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276528:1
position: 276528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:279433-279490:1:exon

position:279433:1
position: 279433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279490:1
position: 279490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:282011-282121:1:exon

position:282011:1
position: 282011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282121:1
position: 282121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:284649-285231:1:exon

position:284649:1
position: 284649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rbbp4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rbbp4
product: RB binding protein 4, chromatin remodeling factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033044800.1
SIO_010081: rbbp4
subclass of: SO_0000673
so part of: rbbp4
location: join(250592..250724,253516..253656,264928..265075,266692..266837,267374..267547,270532..270647,272429..272589,274499..274625,275591..275668,276452..276528,279433..279490,282011..282121,284649..285231)
location: region:250592-285231:1
so has part: feature:250592-250724:1:exon
so has part: feature:253516-253656:1:exon
so has part: feature:264928-265075:1:exon
so has part: feature:266692-266837:1:exon
so has part: feature:267374-267547:1:exon
so has part: feature:270532-270647:1:exon
so has part: feature:272429-272589:1:exon
so has part: feature:274499-274625:1:exon
so has part: feature:275591-275668:1:exon
so has part: feature:276452-276528:1:exon
so has part: feature:279433-279490:1:exon
so has part: feature:282011-282121:1:exon
so has part: feature:284649-285231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250592-250724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253516-253656:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264928-265075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266692-266837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:267374-267547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270532-270647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272429-272589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274499-274625:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275591-275668:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276452-276528:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279433-279490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:282011-282121:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:284649-285231:1:exon

rbbp4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rbbp4
product: RB binding protein 4, chromatin remodeling factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033044802.1
SIO_010081: rbbp4
subclass of: SO_0000673
so part of: rbbp4
location: join(250592..250724,253516..253656,264931..265075,266692..266837,267374..267547,270532..270647,272429..272589,274499..274625,275591..275668,276452..276528,279433..279490,282011..282121,284649..285231)
location: region:250592-285231:1
so has part: feature:250592-250724:1:exon
so has part: feature:253516-253656:1:exon
so has part: feature:264931-265075:1:exon
so has part: feature:266692-266837:1:exon
so has part: feature:267374-267547:1:exon
so has part: feature:270532-270647:1:exon
so has part: feature:272429-272589:1:exon
so has part: feature:274499-274625:1:exon
so has part: feature:275591-275668:1:exon
so has part: feature:276452-276528:1:exon
so has part: feature:279433-279490:1:exon
so has part: feature:282011-282121:1:exon
so has part: feature:284649-285231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250592-250724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253516-253656:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264931-265075:1:exon

position:264931:1
position: 264931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:266692-266837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:267374-267547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270532-270647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272429-272589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274499-274625:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275591-275668:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276452-276528:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279433-279490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:282011-282121:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:284649-285231:1:exon

rbbp4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rbbp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-binding protein RBBP4 isoform X1
translation: MADKEASDAHYDVTPVTSHTHCSSLLTAASPVQSTHLDTTPAICHEWKRGKKTAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGKDYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGVPDPEGQGS
SIO_010081: rbbp4
subclass of: SO_0000673
so part of: rbbp4
location: join(250709..250724,253516..253656,264928..265075,266692..266837,267374..267547,270532..270647,272429..272589,274499..274625,275591..275668,276452..276528,279433..279490,282011..282121,284649..284714)
location: region:250709-284714:1
so has part: feature:250709-250724:1:exon
so has part: feature:253516-253656:1:exon
so has part: feature:264928-265075:1:exon
so has part: feature:266692-266837:1:exon
so has part: feature:267374-267547:1:exon
so has part: feature:270532-270647:1:exon
so has part: feature:272429-272589:1:exon
so has part: feature:274499-274625:1:exon
so has part: feature:275591-275668:1:exon
so has part: feature:276452-276528:1:exon
so has part: feature:279433-279490:1:exon
so has part: feature:282011-282121:1:exon
so has part: feature:284649-284714:1:exon

XP_032900691.1
type: Protein
SIO_000068: ncbiprotein

position:250709:1
position: 250709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284714:1
position: 284714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250709-250724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253516-253656:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264928-265075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266692-266837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:267374-267547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270532-270647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272429-272589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274499-274625:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275591-275668:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276452-276528:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279433-279490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:282011-282121:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:284649-284714:1:exon

rbbp4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rbbp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-binding protein RBBP4 isoform X2
translation: MADKEASDAHYDVTPVTSHTHCSSLLTAASPVQSTHLDTTPAICHEWKRGKKTFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGKDYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGVPDPEGQGS
SIO_010081: rbbp4
subclass of: SO_0000673
so part of: rbbp4
location: join(250709..250724,253516..253656,264931..265075,266692..266837,267374..267547,270532..270647,272429..272589,274499..274625,275591..275668,276452..276528,279433..279490,282011..282121,284649..284714)
location: region:250709-284714:1
so has part: feature:250709-250724:1:exon
so has part: feature:253516-253656:1:exon
so has part: feature:264931-265075:1:exon
so has part: feature:266692-266837:1:exon
so has part: feature:267374-267547:1:exon
so has part: feature:270532-270647:1:exon
so has part: feature:272429-272589:1:exon
so has part: feature:274499-274625:1:exon
so has part: feature:275591-275668:1:exon
so has part: feature:276452-276528:1:exon
so has part: feature:279433-279490:1:exon
so has part: feature:282011-282121:1:exon
so has part: feature:284649-284714:1:exon

XP_032900693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250709-250724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253516-253656:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264931-265075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266692-266837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:267374-267547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270532-270647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272429-272589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274499-274625:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275591-275668:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276452-276528:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279433-279490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:282011-282121:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:284649-284714:1:exon

rbbp4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rbbp4
product: RB binding protein 4, chromatin remodeling factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033044804.1
SIO_010081: rbbp4
subclass of: SO_0000673
so part of: rbbp4
location: join(252465..253021,253516..253656,253709..253710,264928..265075,266692..266837,267374..267547,270532..270647,272429..272589,274499..274625,275591..275668,276452..276528,279433..279490,282011..282121,284649..285231)
location: region:252465-285231:1
so has part: feature:252465-253021:1:exon
so has part: feature:253516-253656:1:exon
so has part: feature:253709-253710:1:exon
so has part: feature:264928-265075:1:exon
so has part: feature:266692-266837:1:exon
so has part: feature:267374-267547:1:exon
so has part: feature:270532-270647:1:exon
so has part: feature:272429-272589:1:exon
so has part: feature:274499-274625:1:exon
so has part: feature:275591-275668:1:exon
so has part: feature:276452-276528:1:exon
so has part: feature:279433-279490:1:exon
so has part: feature:282011-282121:1:exon
so has part: feature:284649-285231:1:exon

position:252465:1
position: 252465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252465-253021:1:exon

position:253021:1
position: 253021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:253516-253656:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:253709-253710:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:264928-265075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:266692-266837:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267374-267547:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:270532-270647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:272429-272589:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274499-274625:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:275591-275668:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:276452-276528:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:279433-279490:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:282011-282121:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:284649-285231:1:exon

rbbp4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rbbp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-binding protein RBBP4 isoform X3
translation: METRKKKTAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGKDYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGVPDPEGQGS
SIO_010081: rbbp4
subclass of: SO_0000673
so part of: rbbp4
location: join(253637..253656,253709..253710,264928..265075,266692..266837,267374..267547,270532..270647,272429..272589,274499..274625,275591..275668,276452..276528,279433..279490,282011..282121,284649..284714)
location: region:253637-284714:1
so has part: feature:253637-253656:1:exon
so has part: feature:253709-253710:1:exon
so has part: feature:264928-265075:1:exon
so has part: feature:266692-266837:1:exon
so has part: feature:267374-267547:1:exon
so has part: feature:270532-270647:1:exon
so has part: feature:272429-272589:1:exon
so has part: feature:274499-274625:1:exon
so has part: feature:275591-275668:1:exon
so has part: feature:276452-276528:1:exon
so has part: feature:279433-279490:1:exon
so has part: feature:282011-282121:1:exon
so has part: feature:284649-284714:1:exon

XP_032900694.1
type: Protein
SIO_000068: ncbiprotein

position:253637:1
position: 253637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253637-253656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253709-253710:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264928-265075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266692-266837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:267374-267547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270532-270647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272429-272589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274499-274625:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275591-275668:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276452-276528:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279433-279490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:282011-282121:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:284649-284714:1:exon

rbbp4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rbbp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-binding protein RBBP4 isoform X3
translation: METRKKKTAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGKDYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGVPDPEGQGS
SIO_010081: rbbp4
subclass of: SO_0000673
so part of: rbbp4
location: join(253637..253656,253709..253710,264928..265075,266692..266837,267374..267547,270532..270647,272429..272589,274499..274625,275591..275668,276452..276528,279433..279490,282011..282121,284649..284714)
location: region:253637-284714:1
so has part: feature:253637-253656:1:exon
so has part: feature:253709-253710:1:exon
so has part: feature:264928-265075:1:exon
so has part: feature:266692-266837:1:exon
so has part: feature:267374-267547:1:exon
so has part: feature:270532-270647:1:exon
so has part: feature:272429-272589:1:exon
so has part: feature:274499-274625:1:exon
so has part: feature:275591-275668:1:exon
so has part: feature:276452-276528:1:exon
so has part: feature:279433-279490:1:exon
so has part: feature:282011-282121:1:exon
so has part: feature:284649-284714:1:exon

XP_032900695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:253637-253656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253709-253710:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264928-265075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266692-266837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:267374-267547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270532-270647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272429-272589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274499-274625:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275591-275668:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276452-276528:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279433-279490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:282011-282121:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:284649-284714:1:exon

LOC116988262
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(288267..297922)
location: region:288267-297922:-1
so has part: feature:288267-297922:-1:exon
subclass of: SO_0000010

116988262
type: Gene
SIO_000068: ncbigene

position:288267:-1
position: 288267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297922:-1
position: 297922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288267-297922:-1:exon

LOC116988262
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988262
product: uncharacterized LOC116988262
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033044807.1
SIO_010081: LOC116988262
subclass of: SO_0000673
so part of: LOC116988262
location: complement(join(288267..288414,293448..293572,294978..295751,297865..297922))
location: region:288267-297922:-1
so has part: feature:297865-297922:-1:exon
so has part: feature:294978-295751:-1:exon
so has part: feature:293448-293572:-1:exon
so has part: feature:288267-288414:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297865-297922:-1:exon

position:297865:-1
position: 297865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294978-295751:-1:exon

position:294978:-1
position: 294978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295751:-1
position: 295751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293448-293572:-1:exon

position:293448:-1
position: 293448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293572:-1
position: 293572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:288267-288414:-1:exon

position:288414:-1
position: 288414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988262
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116988262
translation: MKHRQYLHNMDTRGELPAESPVDIPAVDSLQQVGEHFQWCLYCLEELLDEREKLIRELIFLKEPMHQEICELRVKLVAIYRSKSQAEIKCENYKEEIMFMKRKLFEMTKAHMTYKQVADSTRQGLVQMTLEHEAEESRSQTLSDQLAAFKHQCREEIKLVIHQLENTRNIDNILPLWRSRQTNEFQNLLAEQRQWLEKYHEPKLEKLLSWNKSRAASLRLAQREVGSLRGQVWQLQQQVTSLNNQKLLIEQKLLRAHSVWAEDAARYQIQKRELEAKARILETDLSVQKTKNDDIRCMKQNIAEELAAYKESLTMCGHIIESPDMIDQKNPNPK
SIO_010081: LOC116988262
subclass of: SO_0000673
so part of: LOC116988262
location: complement(join(288339..288414,293448..293572,294978..295751,297865..297894))
location: region:288339-297894:-1
so has part: feature:297865-297894:-1:exon
so has part: feature:294978-295751:-1:exon
so has part: feature:293448-293572:-1:exon
so has part: feature:288339-288414:-1:exon

XP_032900698.1
type: Protein
SIO_000068: ncbiprotein

position:288339:-1
position: 288339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297894:-1
position: 297894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297865-297894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294978-295751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293448-293572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288339-288414:-1:exon

kiaa1522
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: kiaa1522
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 343213..388399
location: region:343213-388399:1
so has part: feature:343213-388399:1:exon
subclass of: SO_0000010

116988200
type: Gene
SIO_000068: ncbigene

position:343213:1
position: 343213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388399:1
position: 388399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343213-388399:1:exon

kiaa1522
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kiaa1522
product: KIAA1522 ortholog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033044750.1
SIO_010081: kiaa1522
subclass of: SO_0000673
so part of: kiaa1522
location: join(343213..343412,373830..373991,377333..377403,378204..378348,379622..379747,380697..383281,383709..384690,387055..388399)
location: region:343213-388399:1
so has part: feature:343213-343412:1:exon
so has part: feature:373830-373991:1:exon
so has part: feature:377333-377403:1:exon
so has part: feature:378204-378348:1:exon
so has part: feature:379622-379747:1:exon
so has part: feature:380697-383281:1:exon
so has part: feature:383709-384690:1:exon
so has part: feature:387055-388399:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:343213-343412:1:exon

position:343412:1
position: 343412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373830-373991:1:exon

position:373830:1
position: 373830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373991:1
position: 373991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:377333-377403:1:exon

position:377333:1
position: 377333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377403:1
position: 377403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:378204-378348:1:exon

position:378204:1
position: 378204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378348:1
position: 378348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:379622-379747:1:exon

position:379622:1
position: 379622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379747:1
position: 379747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:380697-383281:1:exon

position:380697:1
position: 380697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383281:1
position: 383281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:383709-384690:1:exon

position:383709:1
position: 383709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384690:1
position: 384690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:387055-388399:1:exon

position:387055:1
position: 387055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

kiaa1522
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kiaa1522
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1522 homolog
translation: MCVWPSAKCHPLCSDEERVRAAPENSAMGNSHHKKRVAQSAKPRPAWHIGLGRRPGKKKAVTSQSDDEAKWTVHYTPSPYQHRQENVFLPSARPADIEDLHKEAELGLKSLQEQGTLDSCSQPQLRNVQDSMDNCSEADEDLPVLPNSRSGGPGDEVWTKTRSLPPPTPDEIRKTALGIQPSVSSAVIKSKPQEQQKTQSSFKGPKLKEKRIRRSTIMGLPLHVQEELGLGKGSRPSKTAGTEPAADNAGEVLVSRGEENYCFNNLSHLQTRSSLRSVTFTDPSRVDNDSRNTLEHNYQLNWALINSRNRPNSLAVPKSPGELSSPVMSMSPQATYLSKIIPNAILPPAVDVVMINTSQNSLRTLSNSSVLSTPSPAISRSISIHTYDARDYASSDAWSHSQSSETIVSNNSTISSQGNTETPLNNHFKQEVGEKADHNLTDSPVNNRASTSRWVSACSAHQNSQPTQASSNGYGGQSLSPAQSTCSIVDASDTHSMISEQSVTRSLSVRKMRKPPAPPQRMHSLQQSEDQGHAAPSLRDDQSFQPCTTVDSAVSHKLVLPHNGTRTISNGNILQSPNNFSPKTSHHRLEQTALSSLCPIQSGSPPTVTTLVPPPSPTGMSKPNAPQRSCSLHGPETAPSTSSASPTSRYANLFDIPPPPSSPAPPPPNVRQPKFPAAMLYPWGPERIPPPPPGPAPLPPTKRPSFLFNIATHGPRPHHSPPASTPTPAPTPLVTPTPAPTPLVTSTPAPTPLVTPTPAPTPLVIPTPAPAPLVISTPAPTPLVTPTPAPTPLVISTPAPIPLVTPTPAPTPLVIPTPAPTPMVIPTPAPTPLVTPTPAPTPLVTPTPAPTPLVTPTPAPTPLVTPTPAPTPLVTPTPAPTPLVTSTPAPTPLVTPTSSPTPLVTSSSTPTTAVIGPALLASDLLPIDSETKPASGTTSVPGATSVSVATTQLQHIASPHLVERASPSPSPPPAHQPPPPPQRLATDQPPPPSPSTVQSPPTDWPPPPPLAPEGPPPTSGGSEASAPSEAEFLFPPPPPPLLEEAEGRGCPENPGADGQREPVPTHLTTLTPLLAPLPAPTPVPAPTSIPSAPTPTPRLPLGSSPLPPSPLPKVSLSSAPPPLVSPLATKRPQPKTQSASQPLEGPVSPRPPSTLPTPAVIGGGWSRGGAPLSTGGGTDGEGGTPHVAPSLLQMVRLRSGQMNRSAVAIPDPRSPVKGSTTTVLDPVPGSRGPSQATLPVKGSTAAPSKPVRKSLTQRLSTTDPGPIPIAPLQLGSPPLSPNAQGSVLLKHAEEETPLKSPASTASFIFSKNVGSKKLVFDSPRSPEAEAEAKRNLMAELSSVSGRMTSKGWSGLSGKAAPEAQGKTGRVPPPVAKKPSFLPAGQRLPSTSTCGPEMPATQANARLQQETSGQHEEKGKLKTGNGQVCLED
SIO_010081: kiaa1522
subclass of: SO_0000673
so part of: kiaa1522
location: join(343232..343412,373830..373991,377333..377403,378204..378348,379622..379747,380697..383281,383709..384690,387055..387098)
location: region:343232-387098:1
so has part: feature:343232-343412:1:exon
so has part: feature:373830-373991:1:exon
so has part: feature:377333-377403:1:exon
so has part: feature:378204-378348:1:exon
so has part: feature:379622-379747:1:exon
so has part: feature:380697-383281:1:exon
so has part: feature:383709-384690:1:exon
so has part: feature:387055-387098:1:exon

XP_032900641.1
type: Protein
SIO_000068: ncbiprotein

position:343232:1
position: 343232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387098:1
position: 387098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343232-343412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373830-373991:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377333-377403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:378204-378348:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379622-379747:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380697-383281:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:383709-384690:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387055-387098:1:exon

bsdc1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: bsdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 401082..422531
location: region:401082-422531:1
so has part: feature:401082-422531:1:exon
subclass of: SO_0000010

116988261
type: Gene
SIO_000068: ncbigene

position:401082:1
position: 401082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422531:1
position: 422531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401082-422531:1:exon

bsdc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: bsdc1
product: BSD domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033044805.1
SIO_010081: bsdc1
subclass of: SO_0000673
so part of: bsdc1
location: join(401082..401138,403406..403469,404662..404778,408652..408819,409158..409212,412831..412946,414929..414997,417038..417125,417522..418058,420938..421044,421147..422531)
location: region:401082-422531:1
so has part: feature:401082-401138:1:exon
so has part: feature:403406-403469:1:exon
so has part: feature:404662-404778:1:exon
so has part: feature:408652-408819:1:exon
so has part: feature:409158-409212:1:exon
so has part: feature:412831-412946:1:exon
so has part: feature:414929-414997:1:exon
so has part: feature:417038-417125:1:exon
so has part: feature:417522-418058:1:exon
so has part: feature:420938-421044:1:exon
so has part: feature:421147-422531:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401082-401138:1:exon

position:401138:1
position: 401138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:403406-403469:1:exon

position:403406:1
position: 403406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403469:1
position: 403469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:404662-404778:1:exon

position:404662:1
position: 404662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404778:1
position: 404778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:408652-408819:1:exon

position:408652:1
position: 408652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408819:1
position: 408819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:409158-409212:1:exon

position:409158:1
position: 409158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409212:1
position: 409212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:412831-412946:1:exon

position:412831:1
position: 412831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412946:1
position: 412946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:414929-414997:1:exon

position:414929:1
position: 414929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414997:1
position: 414997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:417038-417125:1:exon

position:417038:1
position: 417038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417125:1
position: 417125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:417522-418058:1:exon

position:417522:1
position: 417522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418058:1
position: 418058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:420938-421044:1:exon

position:420938:1
position: 420938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421044:1
position: 421044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:421147-422531:1:exon

position:421147:1
position: 421147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bsdc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: bsdc1
product: BSD domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033044806.1
SIO_010081: bsdc1
subclass of: SO_0000673
so part of: bsdc1
location: join(401084..401138,403406..403469,404662..404778,408652..408819,409158..409212,412831..412946,417038..417125,417522..418058,420938..421044,421147..422531)
location: region:401084-422531:1
so has part: feature:401084-401138:1:exon
so has part: feature:403406-403469:1:exon
so has part: feature:404662-404778:1:exon
so has part: feature:408652-408819:1:exon
so has part: feature:409158-409212:1:exon
so has part: feature:412831-412946:1:exon
so has part: feature:417038-417125:1:exon
so has part: feature:417522-418058:1:exon
so has part: feature:420938-421044:1:exon
so has part: feature:421147-422531:1:exon

position:401084:1
position: 401084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401084-401138:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403406-403469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:404662-404778:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:408652-408819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409158-409212:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:412831-412946:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:417038-417125:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417522-418058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:420938-421044:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:421147-422531:1:exon

bsdc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: bsdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BSD domain-containing protein 1 isoform X1
translation: MADGESGGSWWGSWIQDGLQSVKEKSTEALEFMKRDLAEFSHVVQHDTACTIAATANAVKEKLSAETSTGAGQQVKKGLSNILGVLSDTFAPPPDKTIDCDVITLVATPSGTTELYDSTKARLYTLQADPATYCNEPDGPLELYDEWVAGFNLDERKGEISDLLVNSPSVRALYTNMVPAAVSHSEFWHRYFYKLYQFEQEESRRIALKQRAEQTSQSEELQWEEEEEEDEFVGALPLNSNVQHLSLNSSLPVQPPVLCSRTENSVELESVDVSAIGQAPSEHQSTTAEQSPVELQFQSQVSTSSETSRSEETVKEIGEKAEGSSARLVPEQEEKPHLPTAKDRVPTSAKDANGSSKDQKAKGSTGGVAEPKNTVRLETTKDDGPTDLRVYELNSDSGKSTPSNNGKKGSSTDISEDWEKDFDLDMTEEEVQLALSQVDVTDHQLEDEDWENWE
SIO_010081: bsdc1
subclass of: SO_0000673
so part of: bsdc1
location: join(401128..401138,403406..403469,404662..404778,408652..408819,409158..409212,412831..412946,414929..414997,417038..417125,417522..418058,420938..421044,421147..421179)
location: region:401128-421179:1
so has part: feature:401128-401138:1:exon
so has part: feature:403406-403469:1:exon
so has part: feature:404662-404778:1:exon
so has part: feature:408652-408819:1:exon
so has part: feature:409158-409212:1:exon
so has part: feature:412831-412946:1:exon
so has part: feature:414929-414997:1:exon
so has part: feature:417038-417125:1:exon
so has part: feature:417522-418058:1:exon
so has part: feature:420938-421044:1:exon
so has part: feature:421147-421179:1:exon

XP_032900696.1
type: Protein
SIO_000068: ncbiprotein

position:401128:1
position: 401128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421179:1
position: 421179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401128-401138:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403406-403469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:404662-404778:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:408652-408819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409158-409212:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:412831-412946:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414929-414997:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417038-417125:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:417522-418058:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:420938-421044:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:421147-421179:1:exon

bsdc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: bsdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BSD domain-containing protein 1 isoform X2
translation: MADGESGGSWWGSWIQDGLQSVKEKSTEALEFMKRDLAEFSHVVQHDTACTIAATANAVKEKLSAETSTGAGQQVKKGLSNILGVLSDTFAPPPDKTIDCDVITLVATPSGTTELYDSTKARLYTLQADPATYCNEPDGPLELYDEWVAGFNLDERKGEISDLLVNSPSVRALYTNMEESRRIALKQRAEQTSQSEELQWEEEEEEDEFVGALPLNSNVQHLSLNSSLPVQPPVLCSRTENSVELESVDVSAIGQAPSEHQSTTAEQSPVELQFQSQVSTSSETSRSEETVKEIGEKAEGSSARLVPEQEEKPHLPTAKDRVPTSAKDANGSSKDQKAKGSTGGVAEPKNTVRLETTKDDGPTDLRVYELNSDSGKSTPSNNGKKGSSTDISEDWEKDFDLDMTEEEVQLALSQVDVTDHQLEDEDWENWE
SIO_010081: bsdc1
subclass of: SO_0000673
so part of: bsdc1
location: join(401128..401138,403406..403469,404662..404778,408652..408819,409158..409212,412831..412946,417038..417125,417522..418058,420938..421044,421147..421179)
location: region:401128-421179:1
so has part: feature:401128-401138:1:exon
so has part: feature:403406-403469:1:exon
so has part: feature:404662-404778:1:exon
so has part: feature:408652-408819:1:exon
so has part: feature:409158-409212:1:exon
so has part: feature:412831-412946:1:exon
so has part: feature:417038-417125:1:exon
so has part: feature:417522-418058:1:exon
so has part: feature:420938-421044:1:exon
so has part: feature:421147-421179:1:exon

XP_032900697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:401128-401138:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403406-403469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:404662-404778:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:408652-408819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409158-409212:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:412831-412946:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:417038-417125:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417522-418058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:420938-421044:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:421147-421179:1:exon

tssk3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tssk3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(426376..429548)
location: region:426376-429548:-1
so has part: feature:426376-429548:-1:exon
subclass of: SO_0000010

116988263
type: Gene
SIO_000068: ncbigene

position:426376:-1
position: 426376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429548:-1
position: 429548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426376-429548:-1:exon

tssk3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tssk3
product: testis specific serine kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033044808.1
SIO_010081: tssk3
subclass of: SO_0000673
so part of: tssk3
location: complement(join(426376..427067,428896..429548))
location: region:426376-429548:-1
so has part: feature:428896-429548:-1:exon
so has part: feature:426376-427067:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:428896-429548:-1:exon

position:428896:-1
position: 428896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:426376-427067:-1:exon

position:427067:-1
position: 427067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tssk3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tssk3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific serine/threonine-protein kinase 3
translation: MDKLLLSKGYQLGETIGEGTYSKVKEAYSRNLQRKVAIKIIDRRTAPKDFIHKFLPRELQIVQVLDHQNIVKVHEVWESEDGRIGMVMELAEGGDILEHIRREGPLSELLARPLFRQLVNAIRYCHDRGIAHRDLKCENTLLDKSFNVKLADFGFATHFGGGAAELSQTFCGSTAYAAPEVLQGVPHQSSKSDVWSLGIVLYIVLCGHLPFDDSNIPKMLWLQQNGVAFPQQRQLSREVRDLVGRLLEPDCSLRPLISHVCSHPWLAEPQ
SIO_010081: tssk3
subclass of: SO_0000673
so part of: tssk3
location: complement(join(426400..427067,428896..429040))
location: region:426400-429040:-1
so has part: feature:428896-429040:-1:exon
so has part: feature:426400-427067:-1:exon

XP_032900699.1
type: Protein
SIO_000068: ncbiprotein

position:426400:-1
position: 426400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429040:-1
position: 429040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428896-429040:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426400-427067:-1:exon

LOC116988266
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 476016..488764
location: region:476016-488764:1
so has part: feature:476016-488764:1:exon
subclass of: SO_0000010

116988266
type: Gene
SIO_000068: ncbigene

position:476016:1
position: 476016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488764:1
position: 488764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476016-488764:1:exon

LOC116988266
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988266
product: uncharacterized LOC116988266
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033044812.1
SIO_010081: LOC116988266
subclass of: SO_0000673
so part of: LOC116988266
location: join(476016..476251,479458..479676,480580..480822,482626..482702,488603..488764)
location: region:476016-488764:1
so has part: feature:476016-476251:1:exon
so has part: feature:479458-479676:1:exon
so has part: feature:480580-480822:1:exon
so has part: feature:482626-482702:1:exon
so has part: feature:488603-488764:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:476016-476251:1:exon

position:476251:1
position: 476251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:479458-479676:1:exon

position:479458:1
position: 479458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479676:1
position: 479676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:480580-480822:1:exon

position:480580:1
position: 480580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480822:1
position: 480822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:482626-482702:1:exon

position:482626:1
position: 482626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482702:1
position: 482702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:488603-488764:1:exon

position:488603:1
position: 488603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988266
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116988266
translation: MWPLTPPSQSARGISPFRCLLICFQLVSSCCRPRHCYFGKPIFLGAAGDRESVPAVRSSGDGVFLSGPPHLLERAAMVLSYSPRWELIGDSLLRRELLLGSHQRFHSQDAARWTSTARGLRSPRCTGHLDMETLAYPSYHDYQHHMLVQFPVLHRTWRSCLGKVTLESFHRSRLGLKDYWTNPQRAYSIGCLCRNTRKHVLVLPGNTGISDVDSTITPGLCQYRHKLIWKYRWQKLREDHLASKLRASSPSSRGGEFQWLHRAAVRS
SIO_010081: LOC116988266
subclass of: SO_0000673
so part of: LOC116988266
location: join(476031..476251,479458..479676,480580..480822,482626..482702,488603..488646)
location: region:476031-488646:1
so has part: feature:476031-476251:1:exon
so has part: feature:479458-479676:1:exon
so has part: feature:480580-480822:1:exon
so has part: feature:482626-482702:1:exon
so has part: feature:488603-488646:1:exon

XP_032900703.1
type: Protein
SIO_000068: ncbiprotein

position:476031:1
position: 476031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488646:1
position: 488646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476031-476251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479458-479676:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480580-480822:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:482626-482702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488603-488646:1:exon

marcksl1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: marcksl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 526163..528573
location: region:526163-528573:1
so has part: feature:526163-528573:1:exon
subclass of: SO_0000010

116988267
type: Gene
SIO_000068: ncbigene

position:526163:1
position: 526163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528573:1
position: 528573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526163-528573:1:exon

marcksl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: marcksl1
product: MARCKS like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033044815.1
SIO_010081: marcksl1
subclass of: SO_0000673
so part of: marcksl1
location: join(526163..526369,526420..526518,527296..528573)
location: region:526163-528573:1
so has part: feature:526163-526369:1:exon
so has part: feature:526420-526518:1:exon
so has part: feature:527296-528573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:526163-526369:1:exon

position:526369:1
position: 526369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:526420-526518:1:exon

position:526420:1
position: 526420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526518:1
position: 526518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:527296-528573:1:exon

position:527296:1
position: 527296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

marcksl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: marcksl1
product: MARCKS like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033044813.1
SIO_010081: marcksl1
subclass of: SO_0000673
so part of: marcksl1
location: join(526200..526371,526426..526518,527296..528573)
location: region:526200-528573:1
so has part: feature:526200-526371:1:exon
so has part: feature:526426-526518:1:exon
so has part: feature:527296-528573:1:exon

position:526200:1
position: 526200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526200-526371:1:exon

position:526371:1
position: 526371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:526426-526518:1:exon

position:526426:1
position: 526426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:527296-528573:1:exon

marcksl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: marcksl1
product: MARCKS like 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033044817.1
SIO_010081: marcksl1
subclass of: SO_0000673
so part of: marcksl1
location: join(526201..526371,526426..526518,527296..527722,527768..528573)
location: region:526201-528573:1
so has part: feature:526201-526371:1:exon
so has part: feature:526426-526518:1:exon
so has part: feature:527296-527722:1:exon
so has part: feature:527768-528573:1:exon

position:526201:1
position: 526201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526201-526371:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526426-526518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:527296-527722:1:exon

position:527722:1
position: 527722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:527768-528573:1:exon

position:527768:1
position: 527768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

marcksl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: marcksl1
product: MARCKS like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033044816.1
SIO_010081: marcksl1
subclass of: SO_0000673
so part of: marcksl1
location: join(526201..526371,526426..526518,527296..527719,527759..528573)
location: region:526201-528573:1
so has part: feature:526201-526371:1:exon
so has part: feature:526426-526518:1:exon
so has part: feature:527296-527719:1:exon
so has part: feature:527759-528573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:526201-526371:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526426-526518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:527296-527719:1:exon

position:527719:1
position: 527719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:527759-528573:1:exon

position:527759:1
position: 527759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

marcksl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: marcksl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MARCKS-related protein isoform X1
translation: MGSTLAKSKPKEQGKTSGQENGHVKINGDTSPTKADGETVVATVVAGDVCAAEAGKESPGDGIVPAPAAEGEAKADTPKKKKKKALSFKKFKLGKLSFKRGRRGETAAAAAAGPAEAAAGEAVAAAAADEPRAEGQPDTDTGATDTKPGGPEVEEPSAAEGSKAVAAAVVVEEAAGAASPESGSTDAARDQE
SIO_010081: marcksl1
subclass of: SO_0000673
so part of: marcksl1
location: join(526462..526518,527296..527817)
location: region:526462-527817:1
so has part: feature:526462-526518:1:exon
so has part: feature:527296-527817:1:exon

XP_032900704.1
type: Protein
SIO_000068: ncbiprotein

position:526462:1
position: 526462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527817:1
position: 527817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526462-526518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527296-527817:1:exon

marcksl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: marcksl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MARCKS-related protein isoform X1
translation: MGSTLAKSKPKEQGKTSGQENGHVKINGDTSPTKADGETVVATVVAGDVCAAEAGKESPGDGIVPAPAAEGEAKADTPKKKKKKALSFKKFKLGKLSFKRGRRGETAAAAAAGPAEAAAGEAVAAAAADEPRAEGQPDTDTGATDTKPGGPEVEEPSAAEGSKAVAAAVVVEEAAGAASPESGSTDAARDQE
SIO_010081: marcksl1
subclass of: SO_0000673
so part of: marcksl1
location: join(526462..526518,527296..527817)
location: region:526462-527817:1
so has part: feature:526462-526518:1:exon
so has part: feature:527296-527817:1:exon

XP_032900706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526462-526518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527296-527817:1:exon

marcksl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: marcksl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MARCKS-related protein isoform X3
translation: MGSTLAKSKPKEQGKTSGQENGHVKINGDTSPTKADGETVVATVVAGDVCAAEAGKESPGDGIVPAPAAEGEAKADTPKKKKKKALSFKKFKLGKLSFKRGRRGETAAAAAAGPAEAAAGEAVAAAAADEPRAEGQPDTDTGATDTKPGGPEVEEPSAAEGTASPESGSTDAARDQE
SIO_010081: marcksl1
subclass of: SO_0000673
so part of: marcksl1
location: join(526462..526518,527296..527722,527768..527817)
location: region:526462-527817:1
so has part: feature:526462-526518:1:exon
so has part: feature:527296-527722:1:exon
so has part: feature:527768-527817:1:exon

XP_032900708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526462-526518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527296-527722:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:527768-527817:1:exon

marcksl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: marcksl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MARCKS-related protein isoform X2
translation: MGSTLAKSKPKEQGKTSGQENGHVKINGDTSPTKADGETVVATVVAGDVCAAEAGKESPGDGIVPAPAAEGEAKADTPKKKKKKALSFKKFKLGKLSFKRGRRGETAAAAAAGPAEAAAGEAVAAAAADEPRAEGQPDTDTGATDTKPGGPEVEEPSAAEAAGAASPESGSTDAARDQE
SIO_010081: marcksl1
subclass of: SO_0000673
so part of: marcksl1
location: join(526462..526518,527296..527719,527759..527817)
location: region:526462-527817:1
so has part: feature:526462-526518:1:exon
so has part: feature:527296-527719:1:exon
so has part: feature:527759-527817:1:exon

XP_032900707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526462-526518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527296-527719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:527759-527817:1:exon

hdac1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: hdac1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(531097..553634)
location: region:531097-553634:-1
so has part: feature:531097-553634:-1:exon
subclass of: SO_0000010

116988269
type: Gene
SIO_000068: ncbigene

position:531097:-1
position: 531097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553634:-1
position: 553634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531097-553634:-1:exon

hdac1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hdac1
product: histone deacetylase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033044818.1
SIO_010081: hdac1
subclass of: SO_0000673
so part of: hdac1
location: complement(join(531097..531765,533235..533292,533874..534023,535406..535536,537122..537230,538515..538655,539224..539332,539522..539614,541579..541720,543453..543591,544405..544479,545436..545553,548608..548720,553541..553634))
location: region:531097-553634:-1
so has part: feature:553541-553634:-1:exon
so has part: feature:548608-548720:-1:exon
so has part: feature:545436-545553:-1:exon
so has part: feature:544405-544479:-1:exon
so has part: feature:543453-543591:-1:exon
so has part: feature:541579-541720:-1:exon
so has part: feature:539522-539614:-1:exon
so has part: feature:539224-539332:-1:exon
so has part: feature:538515-538655:-1:exon
so has part: feature:537122-537230:-1:exon
so has part: feature:535406-535536:-1:exon
so has part: feature:533874-534023:-1:exon
so has part: feature:533235-533292:-1:exon
so has part: feature:531097-531765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553541-553634:-1:exon

position:553541:-1
position: 553541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548608-548720:-1:exon

position:548608:-1
position: 548608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548720:-1
position: 548720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:545436-545553:-1:exon

position:545436:-1
position: 545436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545553:-1
position: 545553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:544405-544479:-1:exon

position:544405:-1
position: 544405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544479:-1
position: 544479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:543453-543591:-1:exon

position:543453:-1
position: 543453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543591:-1
position: 543591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:541579-541720:-1:exon

position:541579:-1
position: 541579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541720:-1
position: 541720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:539522-539614:-1:exon

position:539522:-1
position: 539522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539614:-1
position: 539614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:539224-539332:-1:exon

position:539224:-1
position: 539224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539332:-1
position: 539332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:538515-538655:-1:exon

position:538515:-1
position: 538515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538655:-1
position: 538655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:537122-537230:-1:exon

position:537122:-1
position: 537122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537230:-1
position: 537230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:535406-535536:-1:exon

position:535406:-1
position: 535406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535536:-1
position: 535536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:533874-534023:-1:exon

position:533874:-1
position: 533874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534023:-1
position: 534023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:533235-533292:-1:exon

position:533235:-1
position: 533235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533292:-1
position: 533292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:531097-531765:-1:exon

position:531765:-1
position: 531765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hdac1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hdac1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 1
translation: MAFTQAGGGKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEAIFRPVICKVMEMYQPSAIALQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKTFNLPLLMLGGGGYTIRNVARCWTYETSVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKQRLFENLRMLPHAPGVQMQSIPEDAVPDDSGDEEEEESDKRISIRASDKRIACDEEFSDSEDEGEGGRRNATNYKKLKRAKVEEEKEGEEKKSDGKEEEKAKDGVTEKLETKGIKVEETKTSNA
SIO_010081: hdac1
subclass of: SO_0000673
so part of: hdac1
location: complement(join(531729..531765,533235..533292,533874..534023,535406..535536,537122..537230,538515..538655,539224..539332,539522..539614,541579..541720,543453..543591,544405..544479,545436..545553,548608..548720,553541..553595))
location: region:531729-553595:-1
so has part: feature:553541-553595:-1:exon
so has part: feature:548608-548720:-1:exon
so has part: feature:545436-545553:-1:exon
so has part: feature:544405-544479:-1:exon
so has part: feature:543453-543591:-1:exon
so has part: feature:541579-541720:-1:exon
so has part: feature:539522-539614:-1:exon
so has part: feature:539224-539332:-1:exon
so has part: feature:538515-538655:-1:exon
so has part: feature:537122-537230:-1:exon
so has part: feature:535406-535536:-1:exon
so has part: feature:533874-534023:-1:exon
so has part: feature:533235-533292:-1:exon
so has part: feature:531729-531765:-1:exon

XP_032900709.1
type: Protein
SIO_000068: ncbiprotein

position:531729:-1
position: 531729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553595:-1
position: 553595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553541-553595:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548608-548720:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:545436-545553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:544405-544479:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:543453-543591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:541579-541720:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539522-539614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539224-539332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:538515-538655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:537122-537230:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:535406-535536:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:533874-534023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:533235-533292:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:531729-531765:-1:exon

lck
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: lck
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(557309..609190)
location: region:557309-609190:-1
so has part: feature:557309-609190:-1:exon
subclass of: SO_0000010

116988270
type: Gene
SIO_000068: ncbigene

position:557309:-1
position: 557309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609190:-1
position: 609190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557309-609190:-1:exon

lck
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: lck
product: LCK proto-oncogene, Src family tyrosine kinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033044819.1
SIO_010081: lck
subclass of: SO_0000673
so part of: lck
location: complement(join(557309..558077,559949..560080,579629..579782,582413..582489,588709..588888,589819..589971,591078..591227,591842..591945,592268..592366,593676..593769,594547..594616,597103..597215,608958..609190))
location: region:557309-609190:-1
so has part: feature:608958-609190:-1:exon
so has part: feature:597103-597215:-1:exon
so has part: feature:594547-594616:-1:exon
so has part: feature:593676-593769:-1:exon
so has part: feature:592268-592366:-1:exon
so has part: feature:591842-591945:-1:exon
so has part: feature:591078-591227:-1:exon
so has part: feature:589819-589971:-1:exon
so has part: feature:588709-588888:-1:exon
so has part: feature:582413-582489:-1:exon
so has part: feature:579629-579782:-1:exon
so has part: feature:559949-560080:-1:exon
so has part: feature:557309-558077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:608958-609190:-1:exon

position:608958:-1
position: 608958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:597103-597215:-1:exon

position:597103:-1
position: 597103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597215:-1
position: 597215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:594547-594616:-1:exon

position:594547:-1
position: 594547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594616:-1
position: 594616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:593676-593769:-1:exon

position:593676:-1
position: 593676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593769:-1
position: 593769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:592268-592366:-1:exon

position:592268:-1
position: 592268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592366:-1
position: 592366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:591842-591945:-1:exon

position:591842:-1
position: 591842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591945:-1
position: 591945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:591078-591227:-1:exon

position:591078:-1
position: 591078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591227:-1
position: 591227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:589819-589971:-1:exon

position:589819:-1
position: 589819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589971:-1
position: 589971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:588709-588888:-1:exon

position:588709:-1
position: 588709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588888:-1
position: 588888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:582413-582489:-1:exon

position:582413:-1
position: 582413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582489:-1
position: 582489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:579629-579782:-1:exon

position:579629:-1
position: 579629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579782:-1
position: 579782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:559949-560080:-1:exon

position:559949:-1
position: 559949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560080:-1
position: 560080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:557309-558077:-1:exon

position:558077:-1
position: 558077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lck
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: lck
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Lck
translation: MGCNCSTDYDDDNWIEDMCEQCKLEYEREQKQYQQQNYPEVRDPLVEYEHHSPPTSPFPADDLFVALYNYERQHQDDLELKKGDQIKVTSREGEWWKAVSIVTGEEGYIPYNFVAQAHSLGIEPWFFQSLGRKDAERQLLTTGNTHGSYLVRESETTKGSYSLSVRDMDPQHGDVVKHYKIRSLDNGGYYISPRISFGTLHELVDHYSYNVDGLCQQLRKPCQSHKPQRPWWHDEWEVSRESLKLVDKLGAGQFGDVWMGYYNDNTKVAIKCLKPGSMSPESFLAEANLMKTLQHHKLVKLNAVVTEEPIFIITEYMANGSLVDFLKTSVGSTLNIFKLIDMAAQIAEGMAFIEHRNYIHRDLRAANILVSEDLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMSNPEVIQNLERGYRMPQPDNCTEELYDVMNQCWSDKPEDRPTFEFLQSVLEDFFTATEAQYQKQP
SIO_010081: lck
subclass of: SO_0000673
so part of: lck
location: complement(join(557875..558077,559949..560080,579629..579782,582413..582489,588709..588888,589819..589971,591078..591227,591842..591945,592268..592366,593676..593769,594547..594616,597103..597210))
location: region:557875-597210:-1
so has part: feature:597103-597210:-1:exon
so has part: feature:594547-594616:-1:exon
so has part: feature:593676-593769:-1:exon
so has part: feature:592268-592366:-1:exon
so has part: feature:591842-591945:-1:exon
so has part: feature:591078-591227:-1:exon
so has part: feature:589819-589971:-1:exon
so has part: feature:588709-588888:-1:exon
so has part: feature:582413-582489:-1:exon
so has part: feature:579629-579782:-1:exon
so has part: feature:559949-560080:-1:exon
so has part: feature:557875-558077:-1:exon

XP_032900710.1
type: Protein
SIO_000068: ncbiprotein

position:557875:-1
position: 557875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597210:-1
position: 597210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597103-597210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594547-594616:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:593676-593769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:592268-592366:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:591842-591945:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:591078-591227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:589819-589971:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:588709-588888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:582413-582489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:579629-579782:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:559949-560080:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:557875-558077:-1:exon

fam167b
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: fam167b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(619667..621798)
location: region:619667-621798:-1
so has part: feature:619667-621798:-1:exon
subclass of: SO_0000010

116988271
type: Gene
SIO_000068: ncbigene

position:619667:-1
position: 619667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621798:-1
position: 621798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619667-621798:-1:exon

fam167b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fam167b
product: family with sequence similarity 167 member B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033044821.1
SIO_010081: fam167b
subclass of: SO_0000673
so part of: fam167b
location: complement(join(619667..620281,621462..621798))
location: region:619667-621798:-1
so has part: feature:621462-621798:-1:exon
so has part: feature:619667-620281:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:621462-621798:-1:exon

position:621462:-1
position: 621462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:619667-620281:-1:exon

position:620281:-1
position: 620281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fam167b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fam167b
product: family with sequence similarity 167 member B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033044820.1
SIO_010081: fam167b
subclass of: SO_0000673
so part of: fam167b
location: complement(join(619667..620284,621462..621795))
location: region:619667-621795:-1
so has part: feature:621462-621795:-1:exon
so has part: feature:619667-620284:-1:exon

position:621795:-1
position: 621795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621462-621795:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619667-620284:-1:exon

position:620284:-1
position: 620284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fam167b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fam167b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM167B isoform X2
translation: MALAQAAADEEDDLGQLKALADKLKLQTRRPSFAEWQERLQGDPWRECGDGEPAGAGTGSGSGQPTRRVDIAVHSICGFTNIAGAVGWLRAELDMQAVDQQLARRLISLRREMHRLKVEQMCHQHKQMLEEVTMGLEECEEESDLLCDIPLKAAFSLSTPLKHIGITKMNINSRRFSLS
SIO_010081: fam167b
subclass of: SO_0000673
so part of: fam167b
location: complement(join(620021..620281,621462..621740))
location: region:620021-621740:-1
so has part: feature:621462-621740:-1:exon
so has part: feature:620021-620281:-1:exon

XP_032900712.1
type: Protein
SIO_000068: ncbiprotein

position:620021:-1
position: 620021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621740:-1
position: 621740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621462-621740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:620021-620281:-1:exon

fam167b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fam167b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM167B isoform X1
translation: MALAQAAADEEDDLGQLKALADKLKLQTRRPSFAEWQERLQGDPWRECGDGEPAGAGTGSGSGQPTRRVDIAVHSICGFTNIAGAVGWLRAELKDMQAVDQQLARRLISLRREMHRLKVEQMCHQHKQMLEEVTMGLEECEEESDLLCDIPLKAAFSLSTPLKHIGITKMNINSRRFSLS
SIO_010081: fam167b
subclass of: SO_0000673
so part of: fam167b
location: complement(join(620021..620284,621462..621740))
location: region:620021-621740:-1
so has part: feature:621462-621740:-1:exon
so has part: feature:620021-620284:-1:exon

XP_032900711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:621462-621740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:620021-620284:-1:exon

LOC116988272
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 627445..643859
location: region:627445-643859:1
so has part: feature:627445-643859:1:exon
subclass of: SO_0000010

116988272
type: Gene
SIO_000068: ncbigene

position:627445:1
position: 627445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643859:1
position: 643859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627445-643859:1:exon

LOC116988272
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988272
product: myotubularin-related protein 9-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033044822.1
SIO_010081: LOC116988272
subclass of: SO_0000673
so part of: LOC116988272
location: join(627445..627895,632122..632154,634538..634646,635925..636050,637183..637356,637954..638159,638427..638588,639009..639150,639553..639773,642166..642317,643234..643859)
location: region:627445-643859:1
so has part: feature:627445-627895:1:exon
so has part: feature:632122-632154:1:exon
so has part: feature:634538-634646:1:exon
so has part: feature:635925-636050:1:exon
so has part: feature:637183-637356:1:exon
so has part: feature:637954-638159:1:exon
so has part: feature:638427-638588:1:exon
so has part: feature:639009-639150:1:exon
so has part: feature:639553-639773:1:exon
so has part: feature:642166-642317:1:exon
so has part: feature:643234-643859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:627445-627895:1:exon

position:627895:1
position: 627895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:632122-632154:1:exon

position:632122:1
position: 632122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632154:1
position: 632154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:634538-634646:1:exon

position:634538:1
position: 634538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634646:1
position: 634646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:635925-636050:1:exon

position:635925:1
position: 635925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636050:1
position: 636050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:637183-637356:1:exon

position:637183:1
position: 637183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637356:1
position: 637356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:637954-638159:1:exon

position:637954:1
position: 637954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638159:1
position: 638159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:638427-638588:1:exon

position:638427:1
position: 638427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638588:1
position: 638588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:639009-639150:1:exon

position:639009:1
position: 639009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639150:1
position: 639150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:639553-639773:1:exon

position:639553:1
position: 639553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639773:1
position: 639773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:642166-642317:1:exon

position:642166:1
position: 642166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642317:1
position: 642317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:643234-643859:1:exon

position:643234:1
position: 643234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988272
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988272
product: myotubularin-related protein 9-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033044823.1
SIO_010081: LOC116988272
subclass of: SO_0000673
so part of: LOC116988272
location: join(627447..627895,634538..634646,635925..636050,637183..637356,637954..638159,638427..638588,639009..639150,639553..639773,642166..642317,643234..643859)
location: region:627447-643859:1
so has part: feature:627447-627895:1:exon
so has part: feature:634538-634646:1:exon
so has part: feature:635925-636050:1:exon
so has part: feature:637183-637356:1:exon
so has part: feature:637954-638159:1:exon
so has part: feature:638427-638588:1:exon
so has part: feature:639009-639150:1:exon
so has part: feature:639553-639773:1:exon
so has part: feature:642166-642317:1:exon
so has part: feature:643234-643859:1:exon

position:627447:1
position: 627447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627447-627895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634538-634646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635925-636050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:637183-637356:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637954-638159:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638427-638588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639009-639150:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:639553-639773:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:642166-642317:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:643234-643859:1:exon

LOC116988272
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 9-like isoform X1
translation: MEFAELIKTWRVDGVILRRPLAGPVKGTLCVSSHHLLLSSRAGHTEELWLLIRNIDAIDKSVENLCRYPNTEFTGSIGTITIKCKDFCIWHLEIPGMDECLNIASSIEALLSLESIAHTYPFFYRPKLLRLQEGWDLCSPEDHYTQLSAHTDRWRLSYVNKDFSVCTSYPIALIVPRTSDDAVLRIAATFRHGGRFPVLCYWHQRTRMVILRSSQPLTGVNGRRCVEDEGVLAAALRPGEVGFIIDTRSLQARVRGGGMENKAHDLNWRKLHRPMERGRGLQESLVKLLDACNDPSTSVDRWLSKLEACRWLEHVKTLLTTACLVAQCVDREEGSVLVQGSEGRDATLQVTSLAQVILDPDCRTVLGFQSLLEREWLQAGHPFSARCAASAYSHARPGAESPVFLLFLDGCWQICRQFPRCFQFQPHFLVTLFQHAYASCCGTFLGNDPAQRLMLKVKERTISLWAKLNSPSEREQYLNPLYEPNSLAIWPSVAPQSLQLWHGVFLRWKQSAEHQEEAWEQVQHLMRRKPPATNSATPAAVEVDEKPAAPGAPVSV
SIO_010081: LOC116988272
subclass of: SO_0000673
so part of: LOC116988272
location: join(627714..627895,632122..632154,634538..634646,635925..636050,637183..637356,637954..638159,638427..638588,639009..639150,639553..639773,642166..642317,643234..643397)
location: region:627714-643397:1
so has part: feature:627714-627895:1:exon
so has part: feature:632122-632154:1:exon
so has part: feature:634538-634646:1:exon
so has part: feature:635925-636050:1:exon
so has part: feature:637183-637356:1:exon
so has part: feature:637954-638159:1:exon
so has part: feature:638427-638588:1:exon
so has part: feature:639009-639150:1:exon
so has part: feature:639553-639773:1:exon
so has part: feature:642166-642317:1:exon
so has part: feature:643234-643397:1:exon

XP_032900713.1
type: Protein
SIO_000068: ncbiprotein

position:627714:1
position: 627714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643397:1
position: 643397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627714-627895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:632122-632154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634538-634646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635925-636050:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637183-637356:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637954-638159:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:638427-638588:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:639009-639150:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:639553-639773:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:642166-642317:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:643234-643397:1:exon

LOC116988272
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 9-like isoform X2
translation: MEFAELIKTWRVDGVILRRPLAGPVKGTLCVSSHHLLLSSRAGHTEELWLLIRNIDAIDKRFTGSIGTITIKCKDFCIWHLEIPGMDECLNIASSIEALLSLESIAHTYPFFYRPKLLRLQEGWDLCSPEDHYTQLSAHTDRWRLSYVNKDFSVCTSYPIALIVPRTSDDAVLRIAATFRHGGRFPVLCYWHQRTRMVILRSSQPLTGVNGRRCVEDEGVLAAALRPGEVGFIIDTRSLQARVRGGGMENKAHDLNWRKLHRPMERGRGLQESLVKLLDACNDPSTSVDRWLSKLEACRWLEHVKTLLTTACLVAQCVDREEGSVLVQGSEGRDATLQVTSLAQVILDPDCRTVLGFQSLLEREWLQAGHPFSARCAASAYSHARPGAESPVFLLFLDGCWQICRQFPRCFQFQPHFLVTLFQHAYASCCGTFLGNDPAQRLMLKVKERTISLWAKLNSPSEREQYLNPLYEPNSLAIWPSVAPQSLQLWHGVFLRWKQSAEHQEEAWEQVQHLMRRKPPATNSATPAAVEVDEKPAAPGAPVSV
SIO_010081: LOC116988272
subclass of: SO_0000673
so part of: LOC116988272
location: join(627714..627895,634538..634646,635925..636050,637183..637356,637954..638159,638427..638588,639009..639150,639553..639773,642166..642317,643234..643397)
location: region:627714-643397:1
so has part: feature:627714-627895:1:exon
so has part: feature:634538-634646:1:exon
so has part: feature:635925-636050:1:exon
so has part: feature:637183-637356:1:exon
so has part: feature:637954-638159:1:exon
so has part: feature:638427-638588:1:exon
so has part: feature:639009-639150:1:exon
so has part: feature:639553-639773:1:exon
so has part: feature:642166-642317:1:exon
so has part: feature:643234-643397:1:exon

XP_032900714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:627714-627895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634538-634646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635925-636050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:637183-637356:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637954-638159:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638427-638588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639009-639150:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:639553-639773:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:642166-642317:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:643234-643397:1:exon

eif3i
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: eif3i
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(646614..662088)
location: region:646614-662088:-1
so has part: feature:646614-662088:-1:exon
subclass of: SO_0000010

116988274
type: Gene
SIO_000068: ncbigene

position:646614:-1
position: 646614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662088:-1
position: 662088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646614-662088:-1:exon

eif3i
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: eif3i
product: eukaryotic translation initiation factor 3 subunit I
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_033044824.1
SIO_010081: eif3i
subclass of: SO_0000673
so part of: eif3i
location: complement(join(646614..646770,649334..649426,650822..650895,651449..651538,652814..652924,655416..655543,657273..657422,657698..657763,658810..658897,661065..661157,661993..662088))
location: region:646614-662088:-1
so has part: feature:661993-662088:-1:exon
so has part: feature:661065-661157:-1:exon
so has part: feature:658810-658897:-1:exon
so has part: feature:657698-657763:-1:exon
so has part: feature:657273-657422:-1:exon
so has part: feature:655416-655543:-1:exon
so has part: feature:652814-652924:-1:exon
so has part: feature:651449-651538:-1:exon
so has part: feature:650822-650895:-1:exon
so has part: feature:649334-649426:-1:exon
so has part: feature:646614-646770:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:661993-662088:-1:exon

position:661993:-1
position: 661993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:661065-661157:-1:exon

position:661065:-1
position: 661065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661157:-1
position: 661157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:658810-658897:-1:exon

position:658810:-1
position: 658810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658897:-1
position: 658897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:657698-657763:-1:exon

position:657698:-1
position: 657698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657763:-1
position: 657763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:657273-657422:-1:exon

position:657273:-1
position: 657273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657422:-1
position: 657422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:655416-655543:-1:exon

position:655416:-1
position: 655416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655543:-1
position: 655543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:652814-652924:-1:exon

position:652814:-1
position: 652814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652924:-1
position: 652924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:651449-651538:-1:exon

position:651449:-1
position: 651449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651538:-1
position: 651538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:650822-650895:-1:exon

position:650822:-1
position: 650822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650895:-1
position: 650895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:649334-649426:-1:exon

position:649334:-1
position: 649334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649426:-1
position: 649426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:646614-646770:-1:exon

position:646770:-1
position: 646770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

eif3i
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: eif3i
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 3 subunit I
translation: MRPMLLQGHERSITQIKYNREGDLVFSCAKDTVVNAWYSVNGERLGTYIGHTGAVWCVDVDWDSKHVLAGSADNSCRVWDCETGKQMALFKTSSAVRTGGFDFSGNIVMFTTDKQMGYSCFVSFFDIRDHAQITNNEPYMKVSVNDSKITSAVWGPLGEFVIAGLETGELLQFSAKSGEVISKAKEHTKQINDIQTSLDLTMFITASKDNTAKLFDSTTLDHLKTFRTERPVNSAAISPNAEHVVLGGGQEAMDVTTTSTRIGKFEARFFHLSFEEEFGRVKGHFGPINSLIYHPDGKSYSSGGEDGYVRIHHFDPQYFEFEMEF
SIO_010081: eif3i
subclass of: SO_0000673
so part of: eif3i
location: complement(join(646689..646770,649334..649426,650822..650895,651449..651538,652814..652924,655416..655543,657273..657422,657698..657763,658810..658897,661065..661157,661993..661995))
location: region:646689-661995:-1
so has part: feature:661993-661995:-1:exon
so has part: feature:661065-661157:-1:exon
so has part: feature:658810-658897:-1:exon
so has part: feature:657698-657763:-1:exon
so has part: feature:657273-657422:-1:exon
so has part: feature:655416-655543:-1:exon
so has part: feature:652814-652924:-1:exon
so has part: feature:651449-651538:-1:exon
so has part: feature:650822-650895:-1:exon
so has part: feature:649334-649426:-1:exon
so has part: feature:646689-646770:-1:exon

XP_032900715.1
type: Protein
SIO_000068: ncbiprotein

position:646689:-1
position: 646689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661995:-1
position: 661995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661993-661995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661065-661157:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:658810-658897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:657698-657763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:657273-657422:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:655416-655543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:652814-652924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:651449-651538:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:650822-650895:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:649334-649426:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:646689-646770:-1:exon

tmem234
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tmem234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 662059..677109
location: region:662059-677109:1
so has part: feature:662059-677109:1:exon
subclass of: SO_0000010

116988275
type: Gene
SIO_000068: ncbigene

position:662059:1
position: 662059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677109:1
position: 677109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662059-677109:1:exon

tmem234
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: tmem234
product: transmembrane protein 234, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004415904.1
SIO_010081: tmem234
so part of: tmem234
location: join(662059..662099,662509..662660,666514..666580,667889..667981,669194..669410,676968..677109)
location: region:662059-677109:1
so has part: feature:662059-662099:1:exon
so has part: feature:662509-662660:1:exon
so has part: feature:666514-666580:1:exon
so has part: feature:667889-667981:1:exon
so has part: feature:669194-669410:1:exon
so has part: feature:676968-677109:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662059-662099:1:exon

position:662099:1
position: 662099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:662509-662660:1:exon

position:662509:1
position: 662509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662660:1
position: 662660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:666514-666580:1:exon

position:666514:1
position: 666514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666580:1
position: 666580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:667889-667981:1:exon

position:667889:1
position: 667889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667981:1
position: 667981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:669194-669410:1:exon

position:669194:1
position: 669194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669410:1
position: 669410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:676968-677109:1:exon

position:676968:1
position: 676968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem234
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: tmem234
product: transmembrane protein 234, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004415905.1
SIO_010081: tmem234
so part of: tmem234
location: join(662059..662099,662509..662660,666514..666580,667889..667981,669194..669410,672645..673287)
location: region:662059-673287:1
so has part: feature:662059-662099:1:exon
so has part: feature:662509-662660:1:exon
so has part: feature:666514-666580:1:exon
so has part: feature:667889-667981:1:exon
so has part: feature:669194-669410:1:exon
so has part: feature:672645-673287:1:exon

position:673287:1
position: 673287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662059-662099:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:662509-662660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:666514-666580:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667889-667981:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669194-669410:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:672645-673287:1:exon

position:672645:1
position: 672645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tmem234
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tmem234
product: transmembrane protein 234, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033044825.1
SIO_010081: tmem234
subclass of: SO_0000673
so part of: tmem234
location: join(662059..662099,662509..662660,666514..666580,667889..667981,669194..669746)
location: region:662059-669746:1
so has part: feature:662059-662099:1:exon
so has part: feature:662509-662660:1:exon
so has part: feature:666514-666580:1:exon
so has part: feature:667889-667981:1:exon
so has part: feature:669194-669746:1:exon

position:669746:1
position: 669746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662059-662099:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:662509-662660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:666514-666580:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667889-667981:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669194-669746:1:exon

tmem234
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tmem234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 234
translation: MATVLEAFCLVLVSLLWGATNPFLKKGTEGIEKVQSGNWVTQLLAEMRFLVLNYKYLIPFLLNQSGSLLFYFTLASTDLSLAILLTNSLTFVFTALTGKLLGEDIGGKQAMAGMLLTLIGITLCVASNISMET
SIO_010081: tmem234
subclass of: SO_0000673
so part of: tmem234
location: join(662087..662099,662509..662660,666514..666580,667889..667981,669194..669270)
location: region:662087-669270:1
so has part: feature:662087-662099:1:exon
so has part: feature:662509-662660:1:exon
so has part: feature:666514-666580:1:exon
so has part: feature:667889-667981:1:exon
so has part: feature:669194-669270:1:exon

XP_032900716.1
type: Protein
SIO_000068: ncbiprotein

position:662087:1
position: 662087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669270:1
position: 669270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662087-662099:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:662509-662660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:666514-666580:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667889-667981:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:669194-669270:1:exon

LOC116988202
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988202
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 677086..712338
location: region:677086-712338:1
so has part: feature:677086-712338:1:exon
subclass of: SO_0000010

116988202
type: Gene
SIO_000068: ncbigene

position:677086:1
position: 677086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712338:1
position: 712338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677086-712338:1:exon

LOC116988202
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988202
product: uncharacterized LOC116988202
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033044753.1
SIO_010081: LOC116988202
subclass of: SO_0000673
so part of: LOC116988202
location: join(677086..677115,679717..679814,689708..689984,693197..693341,694477..696633,712177..712338)
location: region:677086-712338:1
so has part: feature:677086-677115:1:exon
so has part: feature:679717-679814:1:exon
so has part: feature:689708-689984:1:exon
so has part: feature:693197-693341:1:exon
so has part: feature:694477-696633:1:exon
so has part: feature:712177-712338:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677086-677115:1:exon

position:677115:1
position: 677115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:679717-679814:1:exon

position:679717:1
position: 679717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679814:1
position: 679814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:689708-689984:1:exon

position:689708:1
position: 689708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689984:1
position: 689984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:693197-693341:1:exon

position:693197:1
position: 693197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693341:1
position: 693341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:694477-696633:1:exon

position:694477:1
position: 694477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696633:1
position: 696633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:712177-712338:1:exon

position:712177:1
position: 712177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988202
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988202
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116988202
translation: MEQNKKYTREKCIECSSCKGSNQHLKRNYQGSSEQTPAFKSCSLFPWNAAQSGRVWTRQSSLLLPYEWEDDCEMIDWVIDQYVQEDSSISAFYKGRLILTLKDALGITTVTADAGNLPRSLQGHLFEANIPIIPEYCSPGPSSDCQPCEEQCNREPQTPQDPSPAALCETAAQTAGQSDESHPASEEQYYQANMWKQCHDNVMNRCQDNVGQQCQEDHVGQQCQDNVCQQCQGHVGQQCQEDHVGQQCQENVCQQCQDNAVQRFQDSAVQTCPENVGQRCQDNAVKPCQDNTVKPCQENAVKPCQENAVKPCQENAVKPCQENAVKPCQENAVKPCQDNVGQRCQCNAVKPCQCNAVKPCQDNAVKPCQDNAVKPCQDNAVKPCQDNAVKPCQDNAVNPCQDNTVKPCQDNAVKPCQCNAVKPCQCNAVKPCQDNAVKPCQDNAVKPCQDNAVKPWQDNAVETMPGQCG
SIO_010081: LOC116988202
subclass of: SO_0000673
so part of: LOC116988202
location: join(677086..677115,679717..679814,689708..689984,693197..693341,694477..695336)
location: region:677086-695336:1
so has part: feature:677086-677115:1:exon
so has part: feature:679717-679814:1:exon
so has part: feature:689708-689984:1:exon
so has part: feature:693197-693341:1:exon
so has part: feature:694477-695336:1:exon

XP_032900644.1
type: Protein
SIO_000068: ncbiprotein

position:695336:1
position: 695336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677086-677115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:679717-679814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689708-689984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:693197-693341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:694477-695336:1:exon

LOC116988203
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988203
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 695469..696233
location: region:695469-696233:1
so has part: feature:695469-696233:1:exon
subclass of: SO_0000010

116988203
type: Gene
SIO_000068: ncbigene

position:695469:1
position: 695469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696233:1
position: 696233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695469-696233:1:exon

LOC116988203
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988203
product: small proline-rich protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_033044754.1
SIO_010081: LOC116988203
subclass of: SO_0000673
so part of: LOC116988203
location: 695469..696233
location: region:695469-696233:1
so has part: feature:695469-696233:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:695469-696233:1:exon

LOC116988203
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988203
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small proline-rich protein 3-like
translation: MSGQCGETMPVQCGENHSQCNAGNHGQDNAVKPCQDNAVKPCQDNAVKPCQDNAVKPCQDNAVKPCQDNAVKPCQDNAVKPCQDNAVKPCQCNAVKPCQENVVKPCQDNAVKPCQDNAVKPCQENVVKPCQDNAVKPCQDNAVKPCQDNAVKPCQENVVKPCQDNAVKPCQDNAVKPCQENVVKPCQDNAVKPCQDNAVKPCQDNAVKPCQDNDGEQVRSTLVKPCQDNTVKPGRTNPVKTMAGQCGETMQDNR
SIO_010081: LOC116988203
subclass of: SO_0000673
so part of: LOC116988203
location: 695469..696233
location: region:695469-696233:1
so has part: feature:695469-696233:1:exon

XP_032900645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:695469-696233:1:exon

dcdc2b
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: dcdc2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 716489..736980
location: region:716489-736980:1
so has part: feature:716489-736980:1:exon
subclass of: SO_0000010

116988204
type: Gene
SIO_000068: ncbigene

position:716489:1
position: 716489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736980:1
position: 736980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716489-736980:1:exon

dcdc2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dcdc2b
product: doublecortin domain containing 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033044755.1
SIO_010081: dcdc2b
subclass of: SO_0000673
so part of: dcdc2b
location: join(716489..716798,725162..725219,727006..727082,728438..728569,735854..736024,736230..736341,736808..736980)
location: region:716489-736980:1
so has part: feature:716489-716798:1:exon
so has part: feature:725162-725219:1:exon
so has part: feature:727006-727082:1:exon
so has part: feature:728438-728569:1:exon
so has part: feature:735854-736024:1:exon
so has part: feature:736230-736341:1:exon
so has part: feature:736808-736980:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:716489-716798:1:exon

position:716798:1
position: 716798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725162-725219:1:exon

position:725162:1
position: 725162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725219:1
position: 725219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:727006-727082:1:exon

position:727006:1
position: 727006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727082:1
position: 727082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:728438-728569:1:exon

position:728438:1
position: 728438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728569:1
position: 728569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:735854-736024:1:exon

position:735854:1
position: 735854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736024:1
position: 736024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:736230-736341:1:exon

position:736230:1
position: 736230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736341:1
position: 736341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:736808-736980:1:exon

position:736808:1
position: 736808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dcdc2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dcdc2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: doublecortin domain-containing protein 2B
translation: MASTVVPAVPAAKNVVVFKNGDPFFTGRKLVINQRQILTFETFLNEVTSNIQAAVAVRNIYTPSGGHRVLDLPELHNGSHYVAAGFERFKKIDYLQKRNQKPNGNRRKNGAMTRVDYSCRRNVSGHWKKCIHMPCIVNIFRNGDLLSPPFRLIIPKHVMSDWEQILALVTEKANIRTGAVRRVGQCGPVRAGVGQCGLVRAGVGQCGLMWADVGQCEPVWVSLGQCEPVWAGAGQCGPVSPGVRSVFKVSEERAELHGALEIADDENTKVELPVDKRAAEVIEDEIIAEDGTHHIEVRHRTVQHRNRPFGPQCPC
SIO_010081: dcdc2b
subclass of: SO_0000673
so part of: dcdc2b
location: join(716521..716798,725162..725219,727006..727082,728438..728569,735854..736024,736230..736341,736808..736927)
location: region:716521-736927:1
so has part: feature:716521-716798:1:exon
so has part: feature:725162-725219:1:exon
so has part: feature:727006-727082:1:exon
so has part: feature:728438-728569:1:exon
so has part: feature:735854-736024:1:exon
so has part: feature:736230-736341:1:exon
so has part: feature:736808-736927:1:exon

XP_032900646.1
type: Protein
SIO_000068: ncbiprotein

position:716521:1
position: 716521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736927:1
position: 736927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716521-716798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725162-725219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:727006-727082:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:728438-728569:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735854-736024:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:736230-736341:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:736808-736927:1:exon

LOC116988276
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 808742..810133
location: region:808742-810133:1
so has part: feature:808742-810133:1:exon
subclass of: SO_0000010

116988276
type: Gene
SIO_000068: ncbigene

position:808742:1
position: 808742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810133:1
position: 810133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808742-810133:1:exon

LOC116988276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988276
product: transcription factor SOX-11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033044827.1
SIO_010081: LOC116988276
subclass of: SO_0000673
so part of: LOC116988276
location: join(808742..808881,808924..810133)
location: region:808742-810133:1
so has part: feature:808742-808881:1:exon
so has part: feature:808924-810133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:808742-808881:1:exon

position:808881:1
position: 808881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:808924-810133:1:exon

position:808924:1
position: 808924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-11-like
translation: MSAASSPNPWGGGGGGTPGRGEDEGAAGGCQPDWCKTPTGHIKRPMNAFMVWSQIERKKIMEQVPDMHNAEISKRLGKKWKLLKEAEKSPFIREAERLRLKHMADYPDYKYRPRKKVRGDPAPPAAAPAASEPRSHKKPPGKKHNRAHKAKQLLERSKAKRAAKAGQHGALGPNGRRPPPAEPESEGEEVEDAEPEAELLHYCLGGKKPPSSEPRPSGRPLSARPPDDCDGQLLLFDLSLNVAAGGGGGGAGPGGHLSLDKDSDSLAGGSSPVSHFEFPDYGTPEVRKMISGDWLEIESNISY
SIO_010081: LOC116988276
subclass of: SO_0000673
so part of: LOC116988276
location: 808962..809873
location: region:808962-809873:1
so has part: feature:808962-809873:1:exon

XP_032900718.1
type: Protein
SIO_000068: ncbiprotein

position:808962:1
position: 808962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809873:1
position: 809873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808962-809873:1:exon

iqcc
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: iqcc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(851550..862639)
location: region:851550-862639:-1
so has part: feature:851550-862639:-1:exon
subclass of: SO_0000010

116988277
type: Gene
SIO_000068: ncbigene

position:851550:-1
position: 851550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862639:-1
position: 862639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:851550-862639:-1:exon

iqcc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: iqcc
product: IQ motif containing C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_033044828.1
SIO_010081: iqcc
subclass of: SO_0000673
so part of: iqcc
location: complement(join(851550..852885,854016..854137,854713..855103,859478..859621,862600..862639))
location: region:851550-862639:-1
so has part: feature:862600-862639:-1:exon
so has part: feature:859478-859621:-1:exon
so has part: feature:854713-855103:-1:exon
so has part: feature:854016-854137:-1:exon
so has part: feature:851550-852885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:862600-862639:-1:exon

position:862600:-1
position: 862600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:859478-859621:-1:exon

position:859478:-1
position: 859478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859621:-1
position: 859621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:854713-855103:-1:exon

position:854713:-1
position: 854713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855103:-1
position: 855103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:854016-854137:-1:exon

position:854016:-1
position: 854016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854137:-1
position: 854137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:851550-852885:-1:exon

position:852885:-1
position: 852885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

iqcc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: iqcc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ domain-containing protein C
translation: MAAGLRGICRLQAYGRGYLIRKKFRSLRQDYESIVKEIEGGLDNLEWDGKVLPRPKFRNQIAGMDNVHKLSKTQTSPALCPEADKSADCSLIENDEPVKDSCDGRNSTSGQSAPMQLVASALSTDTSSHWEAAQTEGVSALFETEEASCADGAERKVLESCTTVLSACGGTIREHASADGVASKMQDAKNEPLYKLQRKEMPTAYEDLQNYRSNLAMELLWLQQAIASRKKYLILKQRLGAPEP
SIO_010081: iqcc
subclass of: SO_0000673
so part of: iqcc
location: complement(join(852844..852885,854016..854137,854713..855103,859478..859621,862600..862635))
location: region:852844-862635:-1
so has part: feature:862600-862635:-1:exon
so has part: feature:859478-859621:-1:exon
so has part: feature:854713-855103:-1:exon
so has part: feature:854016-854137:-1:exon
so has part: feature:852844-852885:-1:exon

XP_032900719.1
type: Protein
SIO_000068: ncbiprotein

position:852844:-1
position: 852844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862635:-1
position: 862635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862600-862635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:859478-859621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854713-855103:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854016-854137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:852844-852885:-1:exon

zbtb8os
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: zbtb8os
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 862736..874561
location: region:862736-874561:1
so has part: feature:862736-874561:1:exon
subclass of: SO_0000010

116988278
type: Gene
SIO_000068: ncbigene

position:862736:1
position: 862736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874561:1
position: 874561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862736-874561:1:exon

zbtb8os
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: zbtb8os
product: zinc finger and BTB domain containing 8 opposite strand, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033044829.1
SIO_010081: zbtb8os
subclass of: SO_0000673
so part of: zbtb8os
location: join(862736..862851,865677..865701,868203..868324,870386..870468,871637..871689,872318..872354,872470..874561)
location: region:862736-874561:1
so has part: feature:862736-862851:1:exon
so has part: feature:865677-865701:1:exon
so has part: feature:868203-868324:1:exon
so has part: feature:870386-870468:1:exon
so has part: feature:871637-871689:1:exon
so has part: feature:872318-872354:1:exon
so has part: feature:872470-874561:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:862736-862851:1:exon

position:862851:1
position: 862851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:865677-865701:1:exon

position:865677:1
position: 865677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865701:1
position: 865701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:868203-868324:1:exon

position:868203:1
position: 868203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868324:1
position: 868324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:870386-870468:1:exon

position:870386:1
position: 870386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870468:1
position: 870468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:871637-871689:1:exon

position:871637:1
position: 871637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871689:1
position: 871689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:872318-872354:1:exon

position:872318:1
position: 872318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872354:1
position: 872354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:872470-874561:1:exon

position:872470:1
position: 872470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zbtb8os
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: zbtb8os
product: zinc finger and BTB domain containing 8 opposite strand, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033044830.1
SIO_010081: zbtb8os
subclass of: SO_0000673
so part of: zbtb8os
location: join(862738..862818,865677..865701,868203..868324,870386..870468,871637..871689,872318..872354,872470..874561)
location: region:862738-874561:1
so has part: feature:862738-862818:1:exon
so has part: feature:865677-865701:1:exon
so has part: feature:868203-868324:1:exon
so has part: feature:870386-870468:1:exon
so has part: feature:871637-871689:1:exon
so has part: feature:872318-872354:1:exon
so has part: feature:872470-874561:1:exon

position:862738:1
position: 862738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862738-862818:1:exon

position:862818:1
position: 862818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:865677-865701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:868203-868324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:870386-870468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:871637-871689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:872318-872354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:872470-874561:1:exon

zbtb8os
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: zbtb8os
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein archease isoform X1
translation: MDDREYSLTAKQRAVKHKYPPVTKKYEYLDHTADVQLHSWGDTVEEAFEQVVMAMFGYMTDIETVQPLTTLEVKAEGHDMLSLLYNFMAEWLYQFSAELFFIPREMKVIYLDRINYTIRSIGWGEEFDIAKHPQGTEVKAITYSAMQIHEDESPHIFVIIDI
SIO_010081: zbtb8os
subclass of: SO_0000673
so part of: zbtb8os
location: join(862770..862851,865677..865701,868203..868324,870386..870468,871637..871689,872318..872354,872470..872556)
location: region:862770-872556:1
so has part: feature:862770-862851:1:exon
so has part: feature:865677-865701:1:exon
so has part: feature:868203-868324:1:exon
so has part: feature:870386-870468:1:exon
so has part: feature:871637-871689:1:exon
so has part: feature:872318-872354:1:exon
so has part: feature:872470-872556:1:exon

XP_032900720.1
type: Protein
SIO_000068: ncbiprotein

position:862770:1
position: 862770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872556:1
position: 872556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862770-862851:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:865677-865701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:868203-868324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:870386-870468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:871637-871689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:872318-872354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:872470-872556:1:exon

zbtb8os
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: zbtb8os
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein archease isoform X2
translation: MDDREYSLTAKQRAVKHLDHTADVQLHSWGDTVEEAFEQVVMAMFGYMTDIETVQPLTTLEVKAEGHDMLSLLYNFMAEWLYQFSAELFFIPREMKVIYLDRINYTIRSIGWGEEFDIAKHPQGTEVKAITYSAMQIHEDESPHIFVIIDI
SIO_010081: zbtb8os
subclass of: SO_0000673
so part of: zbtb8os
location: join(862770..862818,865677..865701,868203..868324,870386..870468,871637..871689,872318..872354,872470..872556)
location: region:862770-872556:1
so has part: feature:862770-862818:1:exon
so has part: feature:865677-865701:1:exon
so has part: feature:868203-868324:1:exon
so has part: feature:870386-870468:1:exon
so has part: feature:871637-871689:1:exon
so has part: feature:872318-872354:1:exon
so has part: feature:872470-872556:1:exon

XP_032900721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:862770-862818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:865677-865701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:868203-868324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:870386-870468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:871637-871689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:872318-872354:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:872470-872556:1:exon

pnrc2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: pnrc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 880692..891783
location: region:880692-891783:1
so has part: feature:880692-891783:1:exon
subclass of: SO_0000010

116988279
type: Gene
SIO_000068: ncbigene

position:880692:1
position: 880692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891783:1
position: 891783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880692-891783:1:exon

pnrc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pnrc2
product: proline rich nuclear receptor coactivator 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033044832.1
SIO_010081: pnrc2
subclass of: SO_0000673
so part of: pnrc2
location: join(880692..880891,891001..891783)
location: region:880692-891783:1
so has part: feature:880692-880891:1:exon
so has part: feature:891001-891783:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:880692-880891:1:exon

position:880891:1
position: 880891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:891001-891783:1:exon

position:891001:1
position: 891001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pnrc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pnrc2
product: proline rich nuclear receptor coactivator 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033044831.1
SIO_010081: pnrc2
subclass of: SO_0000673
so part of: pnrc2
location: join(880693..880875,890998..891783)
location: region:880693-891783:1
so has part: feature:880693-880875:1:exon
so has part: feature:890998-891783:1:exon

position:880693:1
position: 880693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880693-880875:1:exon

position:880875:1
position: 880875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:890998-891783:1:exon

position:890998:1
position: 890998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pnrc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pnrc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich nuclear receptor coactivator 2
translation: MGGVERLNIPISQPCYATAKRNEHLTNDHQNGRDDDLNHVKMAHKKGEKAHGCCSFMTDVYRVAQKEAKNVMHFTNSQSWEAVVSSSGALLRSQCDQHYAGAKFSEPPSPSVLPKPPSHWVHIPLDPSDHSDMAFQLKTLLKVQA
SIO_010081: pnrc2
subclass of: SO_0000673
so part of: pnrc2
location: 891025..891462
location: region:891025-891462:1
so has part: feature:891025-891462:1:exon

XP_032900722.1
type: Protein
SIO_000068: ncbiprotein

position:891025:1
position: 891025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891462:1
position: 891462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891025-891462:1:exon

pnrc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pnrc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich nuclear receptor coactivator 2
translation: MGGVERLNIPISQPCYATAKRNEHLTNDHQNGRDDDLNHVKMAHKKGEKAHGCCSFMTDVYRVAQKEAKNVMHFTNSQSWEAVVSSSGALLRSQCDQHYAGAKFSEPPSPSVLPKPPSHWVHIPLDPSDHSDMAFQLKTLLKVQA
SIO_010081: pnrc2
subclass of: SO_0000673
so part of: pnrc2
location: 891025..891462
location: region:891025-891462:1
so has part: feature:891025-891462:1:exon

XP_032900723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:891025-891462:1:exon

srsf10
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: srsf10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(896430..909235)
location: region:896430-909235:-1
so has part: feature:896430-909235:-1:exon
subclass of: SO_0000010

116988281
type: Gene
SIO_000068: ncbigene

position:896430:-1
position: 896430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909235:-1
position: 909235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896430-909235:-1:exon

srsf10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: srsf10
product: serine and arginine rich splicing factor 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033044836.1
SIO_010081: srsf10
subclass of: SO_0000673
so part of: srsf10
location: complement(join(896430..898186,899151..899210,899293..899464,900095..900198,906128..906232,909100..909233))
location: region:896430-909233:-1
so has part: feature:909100-909233:-1:exon
so has part: feature:906128-906232:-1:exon
so has part: feature:900095-900198:-1:exon
so has part: feature:899293-899464:-1:exon
so has part: feature:899151-899210:-1:exon
so has part: feature:896430-898186:-1:exon

position:909233:-1
position: 909233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909100-909233:-1:exon

position:909100:-1
position: 909100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:906128-906232:-1:exon

position:906128:-1
position: 906128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906232:-1
position: 906232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:900095-900198:-1:exon

position:900095:-1
position: 900095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900198:-1
position: 900198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:899293-899464:-1:exon

position:899293:-1
position: 899293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899464:-1
position: 899464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:899151-899210:-1:exon

position:899151:-1
position: 899151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899210:-1
position: 899210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:896430-898186:-1:exon

position:898186:-1
position: 898186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

srsf10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: srsf10
product: serine and arginine rich splicing factor 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033044837.1
SIO_010081: srsf10
subclass of: SO_0000673
so part of: srsf10
location: complement(join(897898..898391,899151..899210,899293..899464,900095..900198,906128..906232,909100..909235))
location: region:897898-909235:-1
so has part: feature:909100-909235:-1:exon
so has part: feature:906128-906232:-1:exon
so has part: feature:900095-900198:-1:exon
so has part: feature:899293-899464:-1:exon
so has part: feature:899151-899210:-1:exon
so has part: feature:897898-898391:-1:exon

position:897898:-1
position: 897898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909100-909235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:906128-906232:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900095-900198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:899293-899464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899151-899210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:897898-898391:-1:exon

position:898391:-1
position: 898391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

srsf10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: srsf10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 10 isoform X1
translation: MSRYARPPNSSLFVRNVGDCTRPEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYIQFEDVRDAEDALHNLDRKWVCGRQIEIQFAQGDRKTPGQMKSKERRSSRSSPRYDRYDDYDRRRRSRSRSYDRRRSRSRSYDRSHRRSDSPKNSRSRSSGKRRRSRSNSFNDRHRRRHRSYTRSRSRSRSRSRSRSRSKSVSRSKSASRKESKTRSQSRSCTHSRSGSRSKSRSLSAHKSDSHHED
SIO_010081: srsf10
subclass of: SO_0000673
so part of: srsf10
location: complement(join(897964..898186,899151..899210,899293..899464,900095..900198,906128..906232,909100..909164))
location: region:897964-909164:-1
so has part: feature:909100-909164:-1:exon
so has part: feature:906128-906232:-1:exon
so has part: feature:900095-900198:-1:exon
so has part: feature:899293-899464:-1:exon
so has part: feature:899151-899210:-1:exon
so has part: feature:897964-898186:-1:exon

XP_032900727.1
type: Protein
SIO_000068: ncbiprotein

position:897964:-1
position: 897964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909164:-1
position: 909164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909100-909164:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:906128-906232:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900095-900198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:899293-899464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899151-899210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:897964-898186:-1:exon

srsf10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: srsf10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 10 isoform X2
translation: MSRYARPPNSSLFVRNVGDCTRPEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYIQFEDVRDAEDALHNLDRKWVCGRQIEIQFAQGDRKTPGQMKSKERRSSRSSPRYDRYDDYDRRRRSRSRSYDRRRSRSRSYDRSHRRSDSPKNSRSRSSGKRRRSRSNSFNDRYD
SIO_010081: srsf10
subclass of: SO_0000673
so part of: srsf10
location: complement(join(898382..898391,899151..899210,899293..899464,900095..900198,906128..906232,909100..909164))
location: region:898382-909164:-1
so has part: feature:909100-909164:-1:exon
so has part: feature:906128-906232:-1:exon
so has part: feature:900095-900198:-1:exon
so has part: feature:899293-899464:-1:exon
so has part: feature:899151-899210:-1:exon
so has part: feature:898382-898391:-1:exon

XP_032900728.1
type: Protein
SIO_000068: ncbiprotein

position:898382:-1
position: 898382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909100-909164:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:906128-906232:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900095-900198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:899293-899464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899151-899210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:898382-898391:-1:exon

LOC116988280
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 917781..924193
location: region:917781-924193:1
so has part: feature:917781-924193:1:exon
subclass of: SO_0000010

116988280
type: Gene
SIO_000068: ncbigene

position:917781:1
position: 917781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924193:1
position: 924193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917781-924193:1:exon

LOC116988280
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988280
product: gap junction beta-2 protein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 173 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033044833.1
SIO_010081: LOC116988280
subclass of: SO_0000673
so part of: LOC116988280
location: join(917781..917914,922177..922315,923296..924193)
location: region:917781-924193:1
so has part: feature:917781-917914:1:exon
so has part: feature:922177-922315:1:exon
so has part: feature:923296-924193:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:917781-917914:1:exon

position:917914:1
position: 917914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:922177-922315:1:exon

position:922177:1
position: 922177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922315:1
position: 922315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:923296-924193:1:exon

position:923296:1
position: 923296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988280
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988280
product: gap junction beta-2 protein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 173 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033044834.1
SIO_010081: LOC116988280
subclass of: SO_0000673
so part of: LOC116988280
location: join(917818..917914,923296..924193)
location: region:917818-924193:1
so has part: feature:917818-917914:1:exon
so has part: feature:923296-924193:1:exon

position:917818:1
position: 917818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917818-917914:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923296-924193:1:exon

LOC116988280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-2 protein-like
translation: MGWYILHSLLNGVNKYSTSLGKVWLSVIFVFRVLVLVVAAETVWGDEQSDFVCNTQQPGCRNVCYDRFFPISHIRLWVFQLLFVSVPSLLIGMHVSQRKKSKKNIKIFHLNAAKLKIKIDAPLLRTYLVSLVFKMLFEASFMYLFYWIYEGYQMLRLVKCSEYPCPNTVDCFISRPTEKTIFTIFMLVISALCIVLNVVELCFLIIRYCFMHWKQSMFSAAKNNEKDRRLTAAITSADKTTADMDIDQDSHSEHSSVC
SIO_010081: LOC116988280
subclass of: SO_0000673
so part of: LOC116988280
location: 923307..924083
location: region:923307-924083:1
so has part: feature:923307-924083:1:exon

XP_032900724.1
type: Protein
SIO_000068: ncbiprotein

position:923307:1
position: 923307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924083:1
position: 924083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923307-924083:1:exon

LOC116988280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-2 protein-like
translation: MGWYILHSLLNGVNKYSTSLGKVWLSVIFVFRVLVLVVAAETVWGDEQSDFVCNTQQPGCRNVCYDRFFPISHIRLWVFQLLFVSVPSLLIGMHVSQRKKSKKNIKIFHLNAAKLKIKIDAPLLRTYLVSLVFKMLFEASFMYLFYWIYEGYQMLRLVKCSEYPCPNTVDCFISRPTEKTIFTIFMLVISALCIVLNVVELCFLIIRYCFMHWKQSMFSAAKNNEKDRRLTAAITSADKTTADMDIDQDSHSEHSSVC
SIO_010081: LOC116988280
subclass of: SO_0000673
so part of: LOC116988280
location: 923307..924083
location: region:923307-924083:1
so has part: feature:923307-924083:1:exon

XP_032900725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:923307-924083:1:exon

LOC116988282
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988282
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 928515..929587
location: region:928515-929587:1
so has part: feature:928515-929587:1:exon
subclass of: SO_0000010

116988282
type: Gene
SIO_000068: ncbigene

position:928515:1
position: 928515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929587:1
position: 929587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928515-929587:1:exon

LOC116988282
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988282
product: gap junction beta-2 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 165 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033044838.1
SIO_010081: LOC116988282
subclass of: SO_0000673
so part of: LOC116988282
location: 928515..929587
location: region:928515-929587:1
so has part: feature:928515-929587:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:928515-929587:1:exon

LOC116988282
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988282
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-2 protein-like
translation: MDWDTLQELLGEMNKYSTTLGKVWLSVIFVFRVLVLVVAAETVWGDEQSDFVCNTQQPGCRNVCYDRFFPISHVRLWVFQLLFVSVPSFLIGMHVSQRKKSKKNIKIFRLNAAKLKIKIDAPLLRTYLVSLVFKMLFEASFMYLFYWIYEGYQMVRLVKCSEYPCPNTVDCFISRPTEKTICTVFMLVISALCILLNVSELCFLVVKYCIIQCRTSCFPAVENETKSKR
SIO_010081: LOC116988282
subclass of: SO_0000673
so part of: LOC116988282
location: 928526..929215
location: region:928526-929215:1
so has part: feature:928526-929215:1:exon

XP_032900729.1
type: Protein
SIO_000068: ncbiprotein

position:928526:1
position: 928526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929215:1
position: 929215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928526-929215:1:exon

LOC116988283
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988283
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(930791..936808)
location: region:930791-936808:-1
so has part: feature:930791-936808:-1:exon
subclass of: SO_0000010

116988283
type: Gene
SIO_000068: ncbigene

position:930791:-1
position: 930791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936808:-1
position: 936808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:930791-936808:-1:exon

LOC116988283
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988283
product: fatty acid-binding protein, liver-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033044839.1
SIO_010081: LOC116988283
subclass of: SO_0000673
so part of: LOC116988283
location: complement(join(930791..930889,932654..932743,933632..933804,936637..936808))
location: region:930791-936808:-1
so has part: feature:936637-936808:-1:exon
so has part: feature:933632-933804:-1:exon
so has part: feature:932654-932743:-1:exon
so has part: feature:930791-930889:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:936637-936808:-1:exon

position:936637:-1
position: 936637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933632-933804:-1:exon

position:933632:-1
position: 933632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933804:-1
position: 933804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:932654-932743:-1:exon

position:932654:-1
position: 932654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932743:-1
position: 932743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:930791-930889:-1:exon

position:930889:-1
position: 930889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988283
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988283
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acid-binding protein, liver-like
translation: MAFTGTWQVYAQENIEDFMRALLLPEDIIKIGKDIKPVIEIKQTGDNFVITTKNPRQSVTNEFTIGKEADITSMDGKKMKCMVQMEDGKLICKLKNFLHVQEVQGSEMIEKLTAGTTTMTRKSRRI
SIO_010081: LOC116988283
subclass of: SO_0000673
so part of: LOC116988283
location: complement(join(930839..930889,932654..932743,933632..933804,936637..936703))
location: region:930839-936703:-1
so has part: feature:936637-936703:-1:exon
so has part: feature:933632-933804:-1:exon
so has part: feature:932654-932743:-1:exon
so has part: feature:930839-930889:-1:exon

XP_032900730.1
type: Protein
SIO_000068: ncbiprotein

position:930839:-1
position: 930839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936703:-1
position: 936703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:936637-936703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933632-933804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:932654-932743:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:930839-930889:-1:exon

LOC116988284
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(968078..1015306)
location: region:968078-1015306:-1
so has part: feature:968078-1015306:-1:exon
subclass of: SO_0000010

116988284
type: Gene
SIO_000068: ncbigene

position:968078:-1
position: 968078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015306:-1
position: 1015306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:968078-1015306:-1:exon

LOC116988284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988284
product: myomesin-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033044840.1
SIO_010081: LOC116988284
subclass of: SO_0000673
so part of: LOC116988284
location: complement(join(968078..968691,970347..970402,970897..970919,971925..971961,972938..973101,974016..974121,975539..975577,976308..976395,977617..977727,977817..977884,978874..978933,980056..980200,981236..981372,984681..984725,984805..984911,987531..987687,987824..987938,989996..990174,991671..991797,992499..992686,995080..995201,997757..997931,999575..999758,1001072..1001199,1001896..1001946,1002284..1002483,1003069..1003210,1004071..1004232,1004628..1004768,1005921..1005962,1007654..1007742,1008824..1008916,1010278..1010435,1011009..1011159,1012485..1012620,1015196..1015306))
location: region:968078-1015306:-1
so has part: feature:1015196-1015306:-1:exon
so has part: feature:1012485-1012620:-1:exon
so has part: feature:1011009-1011159:-1:exon
so has part: feature:1010278-1010435:-1:exon
so has part: feature:1008824-1008916:-1:exon
so has part: feature:1007654-1007742:-1:exon
so has part: feature:1005921-1005962:-1:exon
so has part: feature:1004628-1004768:-1:exon
so has part: feature:1004071-1004232:-1:exon
so has part: feature:1003069-1003210:-1:exon
so has part: feature:1002284-1002483:-1:exon
so has part: feature:1001896-1001946:-1:exon
so has part: feature:1001072-1001199:-1:exon
so has part: feature:999575-999758:-1:exon
so has part: feature:997757-997931:-1:exon
so has part: feature:995080-995201:-1:exon
so has part: feature:992499-992686:-1:exon
so has part: feature:991671-991797:-1:exon
so has part: feature:989996-990174:-1:exon
so has part: feature:987824-987938:-1:exon
so has part: feature:987531-987687:-1:exon
so has part: feature:984805-984911:-1:exon
so has part: feature:984681-984725:-1:exon
so has part: feature:981236-981372:-1:exon
so has part: feature:980056-980200:-1:exon
so has part: feature:978874-978933:-1:exon
so has part: feature:977817-977884:-1:exon
so has part: feature:977617-977727:-1:exon
so has part: feature:976308-976395:-1:exon
so has part: feature:975539-975577:-1:exon
so has part: feature:974016-974121:-1:exon
so has part: feature:972938-973101:-1:exon
so has part: feature:971925-971961:-1:exon
so has part: feature:970897-970919:-1:exon
so has part: feature:970347-970402:-1:exon
so has part: feature:968078-968691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1015196-1015306:-1:exon

position:1015196:-1
position: 1015196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1012485-1012620:-1:exon

position:1012485:-1
position: 1012485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012620:-1
position: 1012620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1011009-1011159:-1:exon

position:1011009:-1
position: 1011009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011159:-1
position: 1011159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1010278-1010435:-1:exon

position:1010278:-1
position: 1010278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010435:-1
position: 1010435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1008824-1008916:-1:exon

position:1008824:-1
position: 1008824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008916:-1
position: 1008916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1007654-1007742:-1:exon

position:1007654:-1
position: 1007654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007742:-1
position: 1007742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1005921-1005962:-1:exon

position:1005921:-1
position: 1005921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005962:-1
position: 1005962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1004628-1004768:-1:exon

position:1004628:-1
position: 1004628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004768:-1
position: 1004768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1004071-1004232:-1:exon

position:1004071:-1
position: 1004071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004232:-1
position: 1004232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1003069-1003210:-1:exon

position:1003069:-1
position: 1003069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003210:-1
position: 1003210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1002284-1002483:-1:exon

position:1002284:-1
position: 1002284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002483:-1
position: 1002483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1001896-1001946:-1:exon

position:1001896:-1
position: 1001896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001946:-1
position: 1001946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1001072-1001199:-1:exon

position:1001072:-1
position: 1001072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001199:-1
position: 1001199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:999575-999758:-1:exon

position:999575:-1
position: 999575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999758:-1
position: 999758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:997757-997931:-1:exon

position:997757:-1
position: 997757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997931:-1
position: 997931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:995080-995201:-1:exon

position:995080:-1
position: 995080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995201:-1
position: 995201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:992499-992686:-1:exon

position:992499:-1
position: 992499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992686:-1
position: 992686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:991671-991797:-1:exon

position:991671:-1
position: 991671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991797:-1
position: 991797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:989996-990174:-1:exon

position:989996:-1
position: 989996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990174:-1
position: 990174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:987824-987938:-1:exon

position:987824:-1
position: 987824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987938:-1
position: 987938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:987531-987687:-1:exon

position:987531:-1
position: 987531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987687:-1
position: 987687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:984805-984911:-1:exon

position:984805:-1
position: 984805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984911:-1
position: 984911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:984681-984725:-1:exon

position:984681:-1
position: 984681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984725:-1
position: 984725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:981236-981372:-1:exon

position:981236:-1
position: 981236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981372:-1
position: 981372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:980056-980200:-1:exon

position:980056:-1
position: 980056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980200:-1
position: 980200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:978874-978933:-1:exon

position:978874:-1
position: 978874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978933:-1
position: 978933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:977817-977884:-1:exon

position:977817:-1
position: 977817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977884:-1
position: 977884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:977617-977727:-1:exon

position:977617:-1
position: 977617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977727:-1
position: 977727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:976308-976395:-1:exon

position:976308:-1
position: 976308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976395:-1
position: 976395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:975539-975577:-1:exon

position:975539:-1
position: 975539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975577:-1
position: 975577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:974016-974121:-1:exon

position:974016:-1
position: 974016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974121:-1
position: 974121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:972938-973101:-1:exon

position:972938:-1
position: 972938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973101:-1
position: 973101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:971925-971961:-1:exon

position:971925:-1
position: 971925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971961:-1
position: 971961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:970897-970919:-1:exon

position:970897:-1
position: 970897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970919:-1
position: 970919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:970347-970402:-1:exon

position:970347:-1
position: 970347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970402:-1
position: 970402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:968078-968691:-1:exon

position:968691:-1
position: 968691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myomesin-3-like
translation: MATRFHHSRAEHLDRSPRWVTSAVRTRSSAEGSSVTHGFRPEPGTGGRRRKREEGKRVLFGNEMKKVDESYYKARKILLAPSDHKAIRGKVEKRMAEEKKHREDLDAHGPEFVVLLRPHTVWEKMNVTMSCIVQGAPSPTVTWFKDGIPIKPSDAPGKYTIENKIGLQTLEISRCSPLDSGQYSALASNTHGEASSYATILVNKYQGSDAGESVRLDSAQPVPDVDILDGFAASFPKEGGSLTLSCCFSTPLNGQSGEVIWLRDGALLKESPLVKIATSAHNTQLTLAHVYKEDEGLYTVCLFTPTGCKEHSGYVFVRDAAAAEPGAAGSPLDVECRNVDRDYVLVAWKPPSADGGSVVIGYLIDRREVGTEEWVQCNHIPEKMCKFPALGLCENHTYQFRVRAVNGAGISRASRVSEPVTVTDRTAASRIMRIWTDRGEIVVTKDELEGYVRVPLPPTQLRVTEVGQTFAALGWNEPDPRGREPLTYCVEKCVVGSESWQQASMGITVSCPRFAVTELDKGKVYTFRVKSVNKYGISQPSAPSQGISFGQIPAAPCCPHNVVPVRDSRTSVQLLWEGPEDENELIGFYIYACQVGTNNWEICNNKPVNTNRFTVHGLSPRKEYVFRVKSVSPAGLSDYSMESTPIIVDNSISLPSAPYGLTLLSSGKREMVIAWKKPKFPIGPDILGYYLDFCDAAVAEWHEVNIKPIKARVYKMGNLTEGRFYEFRVFAMNWAGVGPSSAVSDQFKCEQWTTPQPGPPFHLECTEVRSSSLLLHWQPPIYTGKYDVTGYLLELCETEGGEWRAINEKPTPSTHLRVSPLEEGKTYIFRVCALNSAGAGVPSLPSDPVCALTRPGTTEMGTGVDEDGNVFLLFQCPEVTDTSEFIWSKDEQEIATPERVRVETAGDVCKLILVDPGAADLGMYNVQVTGTDGLSSSHALTNEELQKLKELSHRKKHPVIGVKSDWAVELLDKGSVRLWLQVESLSPAAHLQLIFNQKELSSNPTHRINFDKASGLVEIIIQNFTAADQGSYTAQLQDGKATGQFALVLIDDKFRALLSECDFQRNEWRRKQGPYFEKYLSWVVTDDCETLLTCKVTNTRCQTQVTWSKDGQPLTQPTYDPNTGTSALVIPQITKNEEGVYKVVVSDERGEDTSVLKILDQVFDDILREICTIAGSTASDLKLQPMAEGIKIYSSLKYNMDYMKKSWALNNKTLESQDRRRIGSDNHEVWLQIFNPTEADKGKYTLEMFVGKLTHKRELNLSQKVFDEAIAEYQRLKQAAFAEKNRAKVAKGLPDVVNVMENKALYLSCTLSGDPSPEVCWLKNDKEVVSSDNCQVTVDKSSVTFSIQKVTSQDSGRYTLLVKNKYGSESAVITVGVYKCGEEAAKQ
SIO_010081: LOC116988284
subclass of: SO_0000673
so part of: LOC116988284
location: complement(join(968437..968691,970347..970402,970897..970919,971925..971961,972938..973101,974016..974121,975539..975577,976308..976395,977617..977727,977817..977884,978874..978933,980056..980200,981236..981372,984681..984725,984805..984911,987531..987687,987824..987938,989996..990174,991671..991797,992499..992686,995080..995201,997757..997931,999575..999758,1001072..1001199,1001896..1001946,1002284..1002483,1003069..1003210,1004071..1004232,1004628..1004768,1005921..1005962,1007654..1007742,1008824..1008916,1010278..1010435,1011009..1011159,1012485..1012603))
location: region:968437-1012603:-1
so has part: feature:1012485-1012603:-1:exon
so has part: feature:1011009-1011159:-1:exon
so has part: feature:1010278-1010435:-1:exon
so has part: feature:1008824-1008916:-1:exon
so has part: feature:1007654-1007742:-1:exon
so has part: feature:1005921-1005962:-1:exon
so has part: feature:1004628-1004768:-1:exon
so has part: feature:1004071-1004232:-1:exon
so has part: feature:1003069-1003210:-1:exon
so has part: feature:1002284-1002483:-1:exon
so has part: feature:1001896-1001946:-1:exon
so has part: feature:1001072-1001199:-1:exon
so has part: feature:999575-999758:-1:exon
so has part: feature:997757-997931:-1:exon
so has part: feature:995080-995201:-1:exon
so has part: feature:992499-992686:-1:exon
so has part: feature:991671-991797:-1:exon
so has part: feature:989996-990174:-1:exon
so has part: feature:987824-987938:-1:exon
so has part: feature:987531-987687:-1:exon
so has part: feature:984805-984911:-1:exon
so has part: feature:984681-984725:-1:exon
so has part: feature:981236-981372:-1:exon
so has part: feature:980056-980200:-1:exon
so has part: feature:978874-978933:-1:exon
so has part: feature:977817-977884:-1:exon
so has part: feature:977617-977727:-1:exon
so has part: feature:976308-976395:-1:exon
so has part: feature:975539-975577:-1:exon
so has part: feature:974016-974121:-1:exon
so has part: feature:972938-973101:-1:exon
so has part: feature:971925-971961:-1:exon
so has part: feature:970897-970919:-1:exon
so has part: feature:970347-970402:-1:exon
so has part: feature:968437-968691:-1:exon

XP_032900731.1
type: Protein
SIO_000068: ncbiprotein

position:968437:-1
position: 968437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012603:-1
position: 1012603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1012485-1012603:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1011009-1011159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1010278-1010435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1008824-1008916:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1007654-1007742:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1005921-1005962:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1004628-1004768:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1004071-1004232:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1003069-1003210:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1002284-1002483:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1001896-1001946:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1001072-1001199:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:999575-999758:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:997757-997931:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:995080-995201:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:992499-992686:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:991671-991797:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:989996-990174:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:987824-987938:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:987531-987687:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:984805-984911:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:984681-984725:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:981236-981372:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:980056-980200:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:978874-978933:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:977817-977884:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:977617-977727:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:976308-976395:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:975539-975577:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:974016-974121:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:972938-973101:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:971925-971961:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:970897-970919:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:970347-970402:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:968437-968691:-1:exon

LOC116988285
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988285
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 982098..987913
location: region:982098-987913:1
so has part: feature:982098-987913:1:exon
subclass of: SO_0000011

116988285
type: Gene
SIO_000068: ncbigene

position:982098:1
position: 982098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987913:1
position: 987913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982098-987913:1:exon

LOC116988285
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988285
product: uncharacterized LOC116988285
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004415906.1
SIO_010081: LOC116988285
subclass of: SO_0000673
so part of: LOC116988285
location: join(982098..982117,984135..984140,987807..987913)
location: region:982098-987913:1
so has part: feature:982098-982117:1:exon
so has part: feature:984135-984140:1:exon
so has part: feature:987807-987913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:982098-982117:1:exon

position:982117:1
position: 982117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:984135-984140:1:exon

position:984135:1
position: 984135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984140:1
position: 984140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:987807-987913:1:exon

position:987807:1
position: 987807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988286
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988286
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1020001..1031615)
location: region:1020001-1031615:-1
so has part: feature:1020001-1031615:-1:exon
subclass of: SO_0000010

116988286
type: Gene
SIO_000068: ncbigene

position:1020001:-1
position: 1020001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031615:-1
position: 1031615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020001-1031615:-1:exon

LOC116988286
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988286
product: uncharacterized LOC116988286, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033044845.1
SIO_010081: LOC116988286
subclass of: SO_0000673
so part of: LOC116988286
location: complement(join(1020001..1021301,1024646..1024770,1025225..1025375,1025809..1025978,1031191..1031615))
location: region:1020001-1031615:-1
so has part: feature:1031191-1031615:-1:exon
so has part: feature:1025809-1025978:-1:exon
so has part: feature:1025225-1025375:-1:exon
so has part: feature:1024646-1024770:-1:exon
so has part: feature:1020001-1021301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1031191-1031615:-1:exon

position:1031191:-1
position: 1031191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1025809-1025978:-1:exon

position:1025809:-1
position: 1025809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025978:-1
position: 1025978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1025225-1025375:-1:exon

position:1025225:-1
position: 1025225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025375:-1
position: 1025375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1024646-1024770:-1:exon

position:1024646:-1
position: 1024646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024770:-1
position: 1024770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1020001-1021301:-1:exon

position:1021301:-1
position: 1021301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988286
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988286
product: uncharacterized LOC116988286, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033044841.1
SIO_010081: LOC116988286
subclass of: SO_0000673
so part of: LOC116988286
location: complement(join(1020001..1021301,1024646..1024770,1025225..1025375,1025809..1025978,1026565..1026740,1029023..1029149,1031191..1031613))
location: region:1020001-1031613:-1
so has part: feature:1031191-1031613:-1:exon
so has part: feature:1029023-1029149:-1:exon
so has part: feature:1026565-1026740:-1:exon
so has part: feature:1025809-1025978:-1:exon
so has part: feature:1025225-1025375:-1:exon
so has part: feature:1024646-1024770:-1:exon
so has part: feature:1020001-1021301:-1:exon

position:1031613:-1
position: 1031613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031191-1031613:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029023-1029149:-1:exon

position:1029023:-1
position: 1029023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029149:-1
position: 1029149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1026565-1026740:-1:exon

position:1026565:-1
position: 1026565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026740:-1
position: 1026740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1025809-1025978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1025225-1025375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1024646-1024770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1020001-1021301:-1:exon

LOC116988286
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988286
product: uncharacterized LOC116988286, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033044843.1
SIO_010081: LOC116988286
subclass of: SO_0000673
so part of: LOC116988286
location: complement(join(1020001..1020875,1020906..1021301,1024646..1024770,1025225..1025375,1025809..1025978,1026565..1026740,1029023..1029149,1031191..1031612))
location: region:1020001-1031612:-1
so has part: feature:1031191-1031612:-1:exon
so has part: feature:1029023-1029149:-1:exon
so has part: feature:1026565-1026740:-1:exon
so has part: feature:1025809-1025978:-1:exon
so has part: feature:1025225-1025375:-1:exon
so has part: feature:1024646-1024770:-1:exon
so has part: feature:1020906-1021301:-1:exon
so has part: feature:1020001-1020875:-1:exon

position:1031612:-1
position: 1031612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031191-1031612:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029023-1029149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1026565-1026740:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1025809-1025978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1025225-1025375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1024646-1024770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1020906-1021301:-1:exon

position:1020906:-1
position: 1020906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1020001-1020875:-1:exon

position:1020875:-1
position: 1020875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988286
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988286
product: uncharacterized LOC116988286, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033044844.1
SIO_010081: LOC116988286
subclass of: SO_0000673
so part of: LOC116988286
location: complement(join(1020001..1021301,1024646..1024770,1025225..1025375,1025809..1025978,1029023..1029131))
location: region:1020001-1029131:-1
so has part: feature:1029023-1029131:-1:exon
so has part: feature:1025809-1025978:-1:exon
so has part: feature:1025225-1025375:-1:exon
so has part: feature:1024646-1024770:-1:exon
so has part: feature:1020001-1021301:-1:exon

position:1029131:-1
position: 1029131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029023-1029131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1025809-1025978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1025225-1025375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024646-1024770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1020001-1021301:-1:exon

LOC116988286
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988286
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116988286 isoform X4
translation: MWLRWIPVLISAIAAVIGPPEVRWGVRARSIDIWLEPPTVHLRDTPRRSIEDIFSIVEYKVQLNEAATNKMVFVALNDNGNFTVESLEPSTEYCGTAKLLLERDIFLKESQTAEFCSQTEREWTLMIVLLVTASVLFGLMTTGIFCWMVHSYTTLHTALPHALDLNKILMKKHSSWKHSMAKPQEVTSQKDMFHFEQNILAEDIGLFKCLSCDTAGILRVGELGLATLLGPYAPQHHSMGQQTSGPTSSPCDLQTDRSSGLGDNEWSSPYRPQCSQRPSNTQASGEDGSRTRVEDNTPILYIASPDIPDANTGGSTNRDIPSTALQVAREGLLYKVDRRILSQRPEMDVPTLHTMEGKPRSLLSLRDDNKEADWKKQPLEVTLLPPLEEEVQSCPLLLHYRPRVRRDTLLSSLTGEDDASRVRGTGLDEEVPMTNVPPSYSHLSSPLLGESSVLSQLMPTWDDGCQAQLPTLPSPHRDWQQETLPTNTAAEASSLLAAWEIQVQVDE
SIO_010081: LOC116988286
subclass of: SO_0000673
so part of: LOC116988286
location: complement(join(1020267..1021301,1024646..1024770,1025225..1025375,1025809..1025978,1031191..1031233))
location: region:1020267-1031233:-1
so has part: feature:1031191-1031233:-1:exon
so has part: feature:1025809-1025978:-1:exon
so has part: feature:1025225-1025375:-1:exon
so has part: feature:1024646-1024770:-1:exon
so has part: feature:1020267-1021301:-1:exon

XP_032900736.1
type: Protein
SIO_000068: ncbiprotein

position:1020267:-1
position: 1020267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031233:-1
position: 1031233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031191-1031233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1025809-1025978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1025225-1025375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024646-1024770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1020267-1021301:-1:exon

LOC116988286
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988286
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116988286 isoform X2
translation: MWLRWIPVLISAIAGCLAVTMLPRPVHVFINSSNFNSILHWAPHGPRDSVYDVEYQIYGEAWLSKAECYRTSQHRCDLTREFDQETNWYYARVKAVGQGGESEWTISERFCPLDKTVIGPPEVRWGVRARSIDIWLEPPTVHLRDTPRRSIEDIFSIVEYKVQLNEAATNKMVFVALNDNGNFTVESLEPSTEYCGTAKLLLERDIFLKESQTAEFCSQTEREWTLMIVLLVTASVLFGLMTTGIFCWMVHSYTTLHTALPHALDLNKILMKKHSSWKHSMAKPQEVTSQKDMFHFEQNILAEDIGLFKCLSCDTAGILRVGELGLATLLGPYAPQHHSMGQQTSGPTSSPCDLQTDRSSGLGDNEWSSPYRPQCSQRPSNTQASGEDGSRTRVEDDIPDANTGGSTNRDIPSTALQVAREGLLYKVDRRILSQRPEMDVPTLHTMEGKPRSLLSLRDDNKEADWKKQPLEVTLLPPLEEEVQSCPLLLHYRPRVRRDTLLSSLTGEDDASRVRGTGLDEEVPMTNVPPSYSHLSSPLLGESSVLSQLMPTWDDGCQAQLPTLPSPHRDWQQETLPTNTAAEASSLLAAWEIQVQVDE
SIO_010081: LOC116988286
subclass of: SO_0000673
so part of: LOC116988286
location: complement(join(1020267..1020875,1020906..1021301,1024646..1024770,1025225..1025375,1025809..1025978,1026565..1026740,1029023..1029149,1031191..1031233))
location: region:1020267-1031233:-1
so has part: feature:1031191-1031233:-1:exon
so has part: feature:1029023-1029149:-1:exon
so has part: feature:1026565-1026740:-1:exon
so has part: feature:1025809-1025978:-1:exon
so has part: feature:1025225-1025375:-1:exon
so has part: feature:1024646-1024770:-1:exon
so has part: feature:1020906-1021301:-1:exon
so has part: feature:1020267-1020875:-1:exon

XP_032900734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1031191-1031233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029023-1029149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1026565-1026740:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1025809-1025978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1025225-1025375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1024646-1024770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1020906-1021301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1020267-1020875:-1:exon

LOC116988286
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988286
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116988286 isoform X1
translation: MWLRWIPVLISAIAGCLAVTMLPRPVHVFINSSNFNSILHWAPHGPRDSVYDVEYQIYGEAWLSKAECYRTSQHRCDLTREFDQETNWYYARVKAVGQGGESEWTISERFCPLDKTVIGPPEVRWGVRARSIDIWLEPPTVHLRDTPRRSIEDIFSIVEYKVQLNEAATNKMVFVALNDNGNFTVESLEPSTEYCGTAKLLLERDIFLKESQTAEFCSQTEREWTLMIVLLVTASVLFGLMTTGIFCWMVHSYTTLHTALPHALDLNKILMKKHSSWKHSMAKPQEVTSQKDMFHFEQNILAEDIGLFKCLSCDTAGILRVGELGLATLLGPYAPQHHSMGQQTSGPTSSPCDLQTDRSSGLGDNEWSSPYRPQCSQRPSNTQASGEDGSRTRVEDNTPILYIASPDIPDANTGGSTNRDIPSTALQVAREGLLYKVDRRILSQRPEMDVPTLHTMEGKPRSLLSLRDDNKEADWKKQPLEVTLLPPLEEEVQSCPLLLHYRPRVRRDTLLSSLTGEDDASRVRGTGLDEEVPMTNVPPSYSHLSSPLLGESSVLSQLMPTWDDGCQAQLPTLPSPHRDWQQETLPTNTAAEASSLLAAWEIQVQVDE
SIO_010081: LOC116988286
subclass of: SO_0000673
so part of: LOC116988286
location: complement(join(1020267..1021301,1024646..1024770,1025225..1025375,1025809..1025978,1026565..1026740,1029023..1029149,1031191..1031233))
location: region:1020267-1031233:-1
so has part: feature:1031191-1031233:-1:exon
so has part: feature:1029023-1029149:-1:exon
so has part: feature:1026565-1026740:-1:exon
so has part: feature:1025809-1025978:-1:exon
so has part: feature:1025225-1025375:-1:exon
so has part: feature:1024646-1024770:-1:exon
so has part: feature:1020267-1021301:-1:exon

XP_032900732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1031191-1031233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029023-1029149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1026565-1026740:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1025809-1025978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1025225-1025375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1024646-1024770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1020267-1021301:-1:exon

LOC116988286
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988286
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116988286 isoform X3
translation: MSSSIPVTSIPSFTGRHMDPETPCMMLSTRSVIGPPEVRWGVRARSIDIWLEPPTVHLRDTPRRSIEDIFSIVEYKVQLNEAATNKMVFVALNDNGNFTVESLEPSTEYCGTAKLLLERDIFLKESQTAEFCSQTEREWTLMIVLLVTASVLFGLMTTGIFCWMVHSYTTLHTALPHALDLNKILMKKHSSWKHSMAKPQEVTSQKDMFHFEQNILAEDIGLFKCLSCDTAGILRVGELGLATLLGPYAPQHHSMGQQTSGPTSSPCDLQTDRSSGLGDNEWSSPYRPQCSQRPSNTQASGEDGSRTRVEDNTPILYIASPDIPDANTGGSTNRDIPSTALQVAREGLLYKVDRRILSQRPEMDVPTLHTMEGKPRSLLSLRDDNKEADWKKQPLEVTLLPPLEEEVQSCPLLLHYRPRVRRDTLLSSLTGEDDASRVRGTGLDEEVPMTNVPPSYSHLSSPLLGESSVLSQLMPTWDDGCQAQLPTLPSPHRDWQQETLPTNTAAEASSLLAAWEIQVQVDE
SIO_010081: LOC116988286
subclass of: SO_0000673
so part of: LOC116988286
location: complement(join(1020267..1021301,1024646..1024770,1025225..1025375,1025809..1025978,1029023..1029113))
location: region:1020267-1029113:-1
so has part: feature:1029023-1029113:-1:exon
so has part: feature:1025809-1025978:-1:exon
so has part: feature:1025225-1025375:-1:exon
so has part: feature:1024646-1024770:-1:exon
so has part: feature:1020267-1021301:-1:exon

XP_032900735.1
type: Protein
SIO_000068: ncbiprotein

position:1029113:-1
position: 1029113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029023-1029113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1025809-1025978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1025225-1025375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024646-1024770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1020267-1021301:-1:exon

LOC116988287
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1035700..1051657)
location: region:1035700-1051657:-1
so has part: feature:1035700-1051657:-1:exon
subclass of: SO_0000010

116988287
type: Gene
SIO_000068: ncbigene

position:1035700:-1
position: 1035700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051657:-1
position: 1051657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1035700-1051657:-1:exon

LOC116988287
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988287
product: interferon lambda receptor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_033044846.1
SIO_010081: LOC116988287
subclass of: SO_0000673
so part of: LOC116988287
location: complement(join(1035700..1037200,1039777..1039913,1040952..1041108,1043269..1043432,1044927..1045096,1045774..1045879,1051519..1051657))
location: region:1035700-1051657:-1
so has part: feature:1051519-1051657:-1:exon
so has part: feature:1045774-1045879:-1:exon
so has part: feature:1044927-1045096:-1:exon
so has part: feature:1043269-1043432:-1:exon
so has part: feature:1040952-1041108:-1:exon
so has part: feature:1039777-1039913:-1:exon
so has part: feature:1035700-1037200:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1051519-1051657:-1:exon

position:1051519:-1
position: 1051519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1045774-1045879:-1:exon

position:1045774:-1
position: 1045774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045879:-1
position: 1045879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1044927-1045096:-1:exon

position:1044927:-1
position: 1044927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045096:-1
position: 1045096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1043269-1043432:-1:exon

position:1043269:-1
position: 1043269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043432:-1
position: 1043432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1040952-1041108:-1:exon

position:1040952:-1
position: 1040952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041108:-1
position: 1041108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1039777-1039913:-1:exon

position:1039777:-1
position: 1039777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039913:-1
position: 1039913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1035700-1037200:-1:exon

position:1037200:-1
position: 1037200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988287
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon lambda receptor 1-like
translation: MVAAAGTRLVLSFSCLLGHHVLGNLPPSQNVNLSSKNFSLLLNWNTEEHSPEIFYLASSVWRRAPNCTDPSGEGCDLTCTIESCYADYRVKIGSRVPGPSTAWRLSKYFNPFRDIDLGAPQLKVDLKEESMLVHLKVKLAVCKEKVLKACLLDNLSYDVKFWNADELVKKPIEQNTAEKVLEIQKTQLYGSNVCVSARSVYKSINKRGNFSEPLCLSLEAKGVYMLMVLVIVGFLLLCALGLFIPLVVTRVRNIISVPSGLKTPEALNFTNKISFIQVEYCQPVDCSLLNVIHCNVSGTMKERTVPGDDIATGALGGLDSSSESDEDLESYGYTENRWIPDGVILDRDERLDDSFCQAANTDPYRKANCSFTSNHAAFDIQSQGSGCSHHTPLQTKLCSDVASPCSVNSVLLNCSNFHDSINVLEPCDKGSDHDVPLTSVKLLTCNGGIDDGDDLLSFNPPVPDHDLNPQDNVAWKIGSNPTCLYGM
SIO_010081: LOC116988287
subclass of: SO_0000673
so part of: LOC116988287
location: complement(join(1036538..1037200,1039777..1039913,1040952..1041108,1043269..1043432,1044927..1045096,1045774..1045879,1051519..1051585))
location: region:1036538-1051585:-1
so has part: feature:1051519-1051585:-1:exon
so has part: feature:1045774-1045879:-1:exon
so has part: feature:1044927-1045096:-1:exon
so has part: feature:1043269-1043432:-1:exon
so has part: feature:1040952-1041108:-1:exon
so has part: feature:1039777-1039913:-1:exon
so has part: feature:1036538-1037200:-1:exon

XP_032900737.1
type: Protein
SIO_000068: ncbiprotein

position:1036538:-1
position: 1036538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051585:-1
position: 1051585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051519-1051585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045774-1045879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044927-1045096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1043269-1043432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1040952-1041108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1039777-1039913:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1036538-1037200:-1:exon

LOC116988288
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988288
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1054624..1076643)
location: region:1054624-1076643:-1
so has part: feature:1054624-1076643:-1:exon
subclass of: SO_0000010

116988288
type: Gene
SIO_000068: ncbigene

position:1054624:-1
position: 1054624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076643:-1
position: 1076643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054624-1076643:-1:exon

LOC116988288
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988288
product: digestive cysteine proteinase 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033044848.1
SIO_010081: LOC116988288
subclass of: SO_0000673
so part of: LOC116988288
location: complement(join(1054624..1055235,1055990..1056179,1058199..1058360,1059459..1059550,1060449..1060642,1062044..1062242,1064215..1064455,1065730..1065902,1066702..1066794,1073251..1073307,1076514..1076643))
location: region:1054624-1076643:-1
so has part: feature:1076514-1076643:-1:exon
so has part: feature:1073251-1073307:-1:exon
so has part: feature:1066702-1066794:-1:exon
so has part: feature:1065730-1065902:-1:exon
so has part: feature:1064215-1064455:-1:exon
so has part: feature:1062044-1062242:-1:exon
so has part: feature:1060449-1060642:-1:exon
so has part: feature:1059459-1059550:-1:exon
so has part: feature:1058199-1058360:-1:exon
so has part: feature:1055990-1056179:-1:exon
so has part: feature:1054624-1055235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1076514-1076643:-1:exon

position:1076514:-1
position: 1076514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1073251-1073307:-1:exon

position:1073251:-1
position: 1073251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073307:-1
position: 1073307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1066702-1066794:-1:exon

position:1066702:-1
position: 1066702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066794:-1
position: 1066794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1065730-1065902:-1:exon

position:1065730:-1
position: 1065730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065902:-1
position: 1065902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1064215-1064455:-1:exon

position:1064215:-1
position: 1064215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064455:-1
position: 1064455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1062044-1062242:-1:exon

position:1062044:-1
position: 1062044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062242:-1
position: 1062242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1060449-1060642:-1:exon

position:1060449:-1
position: 1060449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060642:-1
position: 1060642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1059459-1059550:-1:exon

position:1059459:-1
position: 1059459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059550:-1
position: 1059550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1058199-1058360:-1:exon

position:1058199:-1
position: 1058199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058360:-1
position: 1058360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1055990-1056179:-1:exon

position:1055990:-1
position: 1055990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056179:-1
position: 1056179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1054624-1055235:-1:exon

position:1055235:-1
position: 1055235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988288
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988288
product: digestive cysteine proteinase 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_033044847.1
SIO_010081: LOC116988288
subclass of: SO_0000673
so part of: LOC116988288
location: complement(join(1054624..1055235,1055990..1056179,1058199..1058360,1059459..1059550,1060449..1060642,1062044..1062242,1064215..1064455,1065730..1065902,1066702..1066794,1073251..1073310,1076514..1076643))
location: region:1054624-1076643:-1
so has part: feature:1076514-1076643:-1:exon
so has part: feature:1073251-1073310:-1:exon
so has part: feature:1066702-1066794:-1:exon
so has part: feature:1065730-1065902:-1:exon
so has part: feature:1064215-1064455:-1:exon
so has part: feature:1062044-1062242:-1:exon
so has part: feature:1060449-1060642:-1:exon
so has part: feature:1059459-1059550:-1:exon
so has part: feature:1058199-1058360:-1:exon
so has part: feature:1055990-1056179:-1:exon
so has part: feature:1054624-1055235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1076514-1076643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1073251-1073310:-1:exon

position:1073310:-1
position: 1073310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1066702-1066794:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065730-1065902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064215-1064455:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1062044-1062242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1060449-1060642:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1059459-1059550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1058199-1058360:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1055990-1056179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1054624-1055235:-1:exon

LOC116988288
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988288
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: digestive cysteine proteinase 2-like isoform X2
translation: MGGAAAGWRRGDYAGVTGHSRCSGGMRGWIVTLLSCLAVHDAKPWKVPSFGNIYHVSGVLSLPYTEIEEPFEAWYNLSGNVSRIEYYNGQVVTLQYAFEKPAGKSYKISPETTETEINVIKCFQVNGTADDPIVPQSVFPNLEGFQLVKQEDWKGRHCDVWQQVVFEEKKKNTYTLWVANSTNGPVPVHYQMKGYNTLFASHYDKYEVDYKDLDRNVDPSIFKLPKGMSCEDFPGPGVEHRILANPIEDLVSMDNGDGAHNFFQHYKEKFGREYLEGDVEHEVRKTTFTHNMRYVHSMNRQNLTFKLAINHFADRTGDEMTVIRGRLKRTTPNTGQPFPALQYQYVQLPPSIDWRLYGAVTPVKDQAVCGSCWSFSSTGAVEGAFFLKTGYLISLSQQMLMDCSWGFGNNACDGGEEWRAFEWILKHGGISTTESYGSYLGQNGFCHYNQSTVIAKMKCYTNVTSGDRTALKIAIFKNGPVAVGIDASHKSFRFYSNGVYYEPQCKNRLDDLDHAVLAVGYGTLDGEAYWLIKNSWSTYWGNDGYVLMSMKHNNCGVATDPTYITLE
SIO_010081: LOC116988288
subclass of: SO_0000673
so part of: LOC116988288
location: complement(join(1055048..1055235,1055990..1056179,1058199..1058360,1059459..1059550,1060449..1060642,1062044..1062242,1064215..1064455,1065730..1065902,1066702..1066794,1073251..1073307,1076514..1076628))
location: region:1055048-1076628:-1
so has part: feature:1076514-1076628:-1:exon
so has part: feature:1073251-1073307:-1:exon
so has part: feature:1066702-1066794:-1:exon
so has part: feature:1065730-1065902:-1:exon
so has part: feature:1064215-1064455:-1:exon
so has part: feature:1062044-1062242:-1:exon
so has part: feature:1060449-1060642:-1:exon
so has part: feature:1059459-1059550:-1:exon
so has part: feature:1058199-1058360:-1:exon
so has part: feature:1055990-1056179:-1:exon
so has part: feature:1055048-1055235:-1:exon

XP_032900739.1
type: Protein
SIO_000068: ncbiprotein

position:1055048:-1
position: 1055048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076628:-1
position: 1076628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076514-1076628:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1073251-1073307:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1066702-1066794:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065730-1065902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064215-1064455:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1062044-1062242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1060449-1060642:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1059459-1059550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1058199-1058360:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1055990-1056179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1055048-1055235:-1:exon

LOC116988288
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988288
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: digestive cysteine proteinase 2-like isoform X1
translation: MGGAAAGWRRGDYAGVTGHSRCSGGMRGWIVTLLSCLAAVHDAKPWKVPSFGNIYHVSGVLSLPYTEIEEPFEAWYNLSGNVSRIEYYNGQVVTLQYAFEKPAGKSYKISPETTETEINVIKCFQVNGTADDPIVPQSVFPNLEGFQLVKQEDWKGRHCDVWQQVVFEEKKKNTYTLWVANSTNGPVPVHYQMKGYNTLFASHYDKYEVDYKDLDRNVDPSIFKLPKGMSCEDFPGPGVEHRILANPIEDLVSMDNGDGAHNFFQHYKEKFGREYLEGDVEHEVRKTTFTHNMRYVHSMNRQNLTFKLAINHFADRTGDEMTVIRGRLKRTTPNTGQPFPALQYQYVQLPPSIDWRLYGAVTPVKDQAVCGSCWSFSSTGAVEGAFFLKTGYLISLSQQMLMDCSWGFGNNACDGGEEWRAFEWILKHGGISTTESYGSYLGQNGFCHYNQSTVIAKMKCYTNVTSGDRTALKIAIFKNGPVAVGIDASHKSFRFYSNGVYYEPQCKNRLDDLDHAVLAVGYGTLDGEAYWLIKNSWSTYWGNDGYVLMSMKHNNCGVATDPTYITLE
SIO_010081: LOC116988288
subclass of: SO_0000673
so part of: LOC116988288
location: complement(join(1055048..1055235,1055990..1056179,1058199..1058360,1059459..1059550,1060449..1060642,1062044..1062242,1064215..1064455,1065730..1065902,1066702..1066794,1073251..1073310,1076514..1076628))
location: region:1055048-1076628:-1
so has part: feature:1076514-1076628:-1:exon
so has part: feature:1073251-1073310:-1:exon
so has part: feature:1066702-1066794:-1:exon
so has part: feature:1065730-1065902:-1:exon
so has part: feature:1064215-1064455:-1:exon
so has part: feature:1062044-1062242:-1:exon
so has part: feature:1060449-1060642:-1:exon
so has part: feature:1059459-1059550:-1:exon
so has part: feature:1058199-1058360:-1:exon
so has part: feature:1055990-1056179:-1:exon
so has part: feature:1055048-1055235:-1:exon

XP_032900738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1076514-1076628:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1073251-1073310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1066702-1066794:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065730-1065902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064215-1064455:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1062044-1062242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1060449-1060642:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1059459-1059550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1058199-1058360:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1055990-1056179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1055048-1055235:-1:exon

LOC116988289
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988289
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1077719..1095215)
location: region:1077719-1095215:-1
so has part: feature:1077719-1095215:-1:exon
subclass of: SO_0000010

116988289
type: Gene
SIO_000068: ncbigene

position:1077719:-1
position: 1077719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095215:-1
position: 1095215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077719-1095215:-1:exon

LOC116988289
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988289
product: digestive cysteine proteinase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033044849.1
SIO_010081: LOC116988289
subclass of: SO_0000673
so part of: LOC116988289
location: complement(join(1077719..1078192,1078721..1078910,1079404..1079565,1081287..1081378,1082889..1083082,1084159..1084357,1085231..1085471,1087479..1087651,1088519..1088611,1093813..1093881,1095129..1095215))
location: region:1077719-1095215:-1
so has part: feature:1095129-1095215:-1:exon
so has part: feature:1093813-1093881:-1:exon
so has part: feature:1088519-1088611:-1:exon
so has part: feature:1087479-1087651:-1:exon
so has part: feature:1085231-1085471:-1:exon
so has part: feature:1084159-1084357:-1:exon
so has part: feature:1082889-1083082:-1:exon
so has part: feature:1081287-1081378:-1:exon
so has part: feature:1079404-1079565:-1:exon
so has part: feature:1078721-1078910:-1:exon
so has part: feature:1077719-1078192:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1095129-1095215:-1:exon

position:1095129:-1
position: 1095129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1093813-1093881:-1:exon

position:1093813:-1
position: 1093813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093881:-1
position: 1093881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1088519-1088611:-1:exon

position:1088519:-1
position: 1088519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088611:-1
position: 1088611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1087479-1087651:-1:exon

position:1087479:-1
position: 1087479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087651:-1
position: 1087651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1085231-1085471:-1:exon

position:1085231:-1
position: 1085231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085471:-1
position: 1085471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1084159-1084357:-1:exon

position:1084159:-1
position: 1084159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084357:-1
position: 1084357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1082889-1083082:-1:exon

position:1082889:-1
position: 1082889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1083082:-1
position: 1083082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1081287-1081378:-1:exon

position:1081287:-1
position: 1081287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081378:-1
position: 1081378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1079404-1079565:-1:exon

position:1079404:-1
position: 1079404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079565:-1
position: 1079565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1078721-1078910:-1:exon

position:1078721:-1
position: 1078721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078910:-1
position: 1078910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1077719-1078192:-1:exon

position:1078192:-1
position: 1078192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988289
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988289
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: digestive cysteine proteinase 1-like
translation: MGPAVRTAALLLLNTVTVLATEPWKPLLLPPSFPDVYHVSGIFSLPYAEIEEPFEAWYNRSGNVSRIEYYHGQVITLQRGFEEPAGISYKISPETTETETNVMKCFQVNGTIDDPILPQSVFPNLEDFKFIKEEDYRGRQCSVWQQIIYVNEKKNKYTMWVSASPLGPVPVHYEMKGYNTLLGSHYDKYEVDYHTMRYQIDPSVFQVPEGMSCRGFLGPGVEHRILANPMEGLVGPDQEDRTYHIFRHYKETFGREYEEGEVEHEVRRTAFTHNMRYIHSRNRANLSYKMDVNHLADRTKDEVAAMRGRLKGSALNNGQPFPTERYMSVVAPPSVDWRLYGAVTPVKDQAMCGSCWSFGTTGALEGALFLKTGYLIPLSQQMLMDCTWGFGNHGCNGGLEWHAFEWILKHGGIADADSYGPYMGQNGFCHYNQSTLTAKIKSYTNVTSGDSEALKMAIFKQGPVTLGIDASHKSFWFYSHGVYYEPHCGNTHKDLDHAVLAVGYGTLNEQPYWLIKNSWSTYWGNDGYVLMAMRDNNCGVTTGATFVTLE
SIO_010081: LOC116988289
subclass of: SO_0000673
so part of: LOC116988289
location: complement(join(1078005..1078192,1078721..1078910,1079404..1079565,1081287..1081378,1082889..1083082,1084159..1084357,1085231..1085471,1087479..1087651,1088519..1088611,1093813..1093881,1095129..1095180))
location: region:1078005-1095180:-1
so has part: feature:1095129-1095180:-1:exon
so has part: feature:1093813-1093881:-1:exon
so has part: feature:1088519-1088611:-1:exon
so has part: feature:1087479-1087651:-1:exon
so has part: feature:1085231-1085471:-1:exon
so has part: feature:1084159-1084357:-1:exon
so has part: feature:1082889-1083082:-1:exon
so has part: feature:1081287-1081378:-1:exon
so has part: feature:1079404-1079565:-1:exon
so has part: feature:1078721-1078910:-1:exon
so has part: feature:1078005-1078192:-1:exon

XP_032900740.1
type: Protein
SIO_000068: ncbiprotein

position:1078005:-1
position: 1078005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095180:-1
position: 1095180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095129-1095180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1093813-1093881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1088519-1088611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087479-1087651:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085231-1085471:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1084159-1084357:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1082889-1083082:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1081287-1081378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1079404-1079565:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1078721-1078910:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1078005-1078192:-1:exon

LOC116988290
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1115250..1205142
location: region:1115250-1205142:1
so has part: feature:1115250-1205142:1:exon
subclass of: SO_0000010

116988290
type: Gene
SIO_000068: ncbigene

position:1115250:1
position: 1115250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1205142:1
position: 1205142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115250-1205142:1:exon

LOC116988290
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988290
product: proto-oncogene tyrosine-protein kinase Yrk-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033044855.1
SIO_010081: LOC116988290
subclass of: SO_0000673
so part of: LOC116988290
location: join(1115250..1115363,1155655..1155719,1176946..1177206,1178452..1178551,1182446..1182544,1183513..1183616,1184952..1185101,1189183..1189347,1193331..1193510,1197422..1197498,1198765..1198918,1201978..1202109,1204234..1205140)
location: region:1115250-1205140:1
so has part: feature:1115250-1115363:1:exon
so has part: feature:1155655-1155719:1:exon
so has part: feature:1176946-1177206:1:exon
so has part: feature:1178452-1178551:1:exon
so has part: feature:1182446-1182544:1:exon
so has part: feature:1183513-1183616:1:exon
so has part: feature:1184952-1185101:1:exon
so has part: feature:1189183-1189347:1:exon
so has part: feature:1193331-1193510:1:exon
so has part: feature:1197422-1197498:1:exon
so has part: feature:1198765-1198918:1:exon
so has part: feature:1201978-1202109:1:exon
so has part: feature:1204234-1205140:1:exon

position:1205140:1
position: 1205140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115250-1115363:1:exon

position:1115363:1
position: 1115363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1155655-1155719:1:exon

position:1155655:1
position: 1155655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155719:1
position: 1155719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1176946-1177206:1:exon

position:1176946:1
position: 1176946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177206:1
position: 1177206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1178452-1178551:1:exon

position:1178452:1
position: 1178452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178551:1
position: 1178551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1182446-1182544:1:exon

position:1182446:1
position: 1182446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182544:1
position: 1182544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1183513-1183616:1:exon

position:1183513:1
position: 1183513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183616:1
position: 1183616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1184952-1185101:1:exon

position:1184952:1
position: 1184952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185101:1
position: 1185101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1189183-1189347:1:exon

position:1189183:1
position: 1189183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189347:1
position: 1189347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1193331-1193510:1:exon

position:1193331:1
position: 1193331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193510:1
position: 1193510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1197422-1197498:1:exon

position:1197422:1
position: 1197422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197498:1
position: 1197498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1198765-1198918:1:exon

position:1198765:1
position: 1198765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198918:1
position: 1198918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1201978-1202109:1:exon

position:1201978:1
position: 1201978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202109:1
position: 1202109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1204234-1205140:1:exon

position:1204234:1
position: 1204234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988290
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988290
product: proto-oncogene tyrosine-protein kinase Yrk-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033044853.1
SIO_010081: LOC116988290
subclass of: SO_0000673
so part of: LOC116988290
location: join(1115251..1115344,1134536..1134548,1142293..1142299,1155655..1155719,1176946..1177206,1178452..1178551,1182446..1182544,1183513..1183616,1184952..1185101,1189183..1189347,1193331..1193510,1197422..1197498,1198765..1198918,1201978..1202109,1204234..1205140)
location: region:1115251-1205140:1
so has part: feature:1115251-1115344:1:exon
so has part: feature:1134536-1134548:1:exon
so has part: feature:1142293-1142299:1:exon
so has part: feature:1155655-1155719:1:exon
so has part: feature:1176946-1177206:1:exon
so has part: feature:1178452-1178551:1:exon
so has part: feature:1182446-1182544:1:exon
so has part: feature:1183513-1183616:1:exon
so has part: feature:1184952-1185101:1:exon
so has part: feature:1189183-1189347:1:exon
so has part: feature:1193331-1193510:1:exon
so has part: feature:1197422-1197498:1:exon
so has part: feature:1198765-1198918:1:exon
so has part: feature:1201978-1202109:1:exon
so has part: feature:1204234-1205140:1:exon

position:1115251:1
position: 1115251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115251-1115344:1:exon

position:1115344:1
position: 1115344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1134536-1134548:1:exon

position:1134536:1
position: 1134536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134548:1
position: 1134548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1142293-1142299:1:exon

position:1142293:1
position: 1142293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142299:1
position: 1142299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1155655-1155719:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1176946-1177206:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1178452-1178551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1182446-1182544:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1183513-1183616:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1184952-1185101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1189183-1189347:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1193331-1193510:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1197422-1197498:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1198765-1198918:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1201978-1202109:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1204234-1205140:1:exon

LOC116988290
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988290
product: proto-oncogene tyrosine-protein kinase Yrk-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033044856.1
SIO_010081: LOC116988290
subclass of: SO_0000673
so part of: LOC116988290
location: join(1130699..1130829,1155655..1155719,1176946..1177206,1178452..1178551,1182446..1182544,1183513..1183616,1184952..1185101,1189183..1189347,1193331..1193510,1197422..1197498,1198765..1198918,1201978..1202109,1204234..1205140)
location: region:1130699-1205140:1
so has part: feature:1130699-1130829:1:exon
so has part: feature:1155655-1155719:1:exon
so has part: feature:1176946-1177206:1:exon
so has part: feature:1178452-1178551:1:exon
so has part: feature:1182446-1182544:1:exon
so has part: feature:1183513-1183616:1:exon
so has part: feature:1184952-1185101:1:exon
so has part: feature:1189183-1189347:1:exon
so has part: feature:1193331-1193510:1:exon
so has part: feature:1197422-1197498:1:exon
so has part: feature:1198765-1198918:1:exon
so has part: feature:1201978-1202109:1:exon
so has part: feature:1204234-1205140:1:exon

position:1130699:1
position: 1130699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1130699-1130829:1:exon

position:1130829:1
position: 1130829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1155655-1155719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1176946-1177206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1178452-1178551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1182446-1182544:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1183513-1183616:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1184952-1185101:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1189183-1189347:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1193331-1193510:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1197422-1197498:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1198765-1198918:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1201978-1202109:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1204234-1205140:1:exon

LOC116988290
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988290
product: proto-oncogene tyrosine-protein kinase Yrk-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033044854.1
SIO_010081: LOC116988290
subclass of: SO_0000673
so part of: LOC116988290
location: join(1133196..1133215,1155655..1155719,1176946..1177206,1178452..1178551,1182446..1182544,1183513..1183616,1184952..1185101,1189183..1189347,1193331..1193510,1197422..1197498,1198765..1198918,1201978..1202109,1204234..1205140)
location: region:1133196-1205140:1
so has part: feature:1133196-1133215:1:exon
so has part: feature:1155655-1155719:1:exon
so has part: feature:1176946-1177206:1:exon
so has part: feature:1178452-1178551:1:exon
so has part: feature:1182446-1182544:1:exon
so has part: feature:1183513-1183616:1:exon
so has part: feature:1184952-1185101:1:exon
so has part: feature:1189183-1189347:1:exon
so has part: feature:1193331-1193510:1:exon
so has part: feature:1197422-1197498:1:exon
so has part: feature:1198765-1198918:1:exon
so has part: feature:1201978-1202109:1:exon
so has part: feature:1204234-1205140:1:exon

position:1133196:1
position: 1133196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133196-1133215:1:exon

position:1133215:1
position: 1133215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1155655-1155719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1176946-1177206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1178452-1178551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1182446-1182544:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1183513-1183616:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1184952-1185101:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1189183-1189347:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1193331-1193510:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1197422-1197498:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1198765-1198918:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1201978-1202109:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1204234-1205140:1:exon

LOC116988290
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988290
product: proto-oncogene tyrosine-protein kinase Yrk-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033044852.1
SIO_010081: LOC116988290
subclass of: SO_0000673
so part of: LOC116988290
location: join(1168839..1169088,1176946..1177206,1178452..1178551,1182446..1182544,1183513..1183616,1184952..1185101,1190771..1190926,1193331..1193510,1197422..1197498,1198765..1198918,1201978..1202109,1204234..1205142)
location: region:1168839-1205142:1
so has part: feature:1168839-1169088:1:exon
so has part: feature:1176946-1177206:1:exon
so has part: feature:1178452-1178551:1:exon
so has part: feature:1182446-1182544:1:exon
so has part: feature:1183513-1183616:1:exon
so has part: feature:1184952-1185101:1:exon
so has part: feature:1190771-1190926:1:exon
so has part: feature:1193331-1193510:1:exon
so has part: feature:1197422-1197498:1:exon
so has part: feature:1198765-1198918:1:exon
so has part: feature:1201978-1202109:1:exon
so has part: feature:1204234-1205142:1:exon

position:1168839:1
position: 1168839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1168839-1169088:1:exon

position:1169088:1
position: 1169088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1176946-1177206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1178452-1178551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182446-1182544:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1183513-1183616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1184952-1185101:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1190771-1190926:1:exon

position:1190771:1
position: 1190771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1190926:1
position: 1190926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1193331-1193510:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197422-1197498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1198765-1198918:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1201978-1202109:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1204234-1205142:1:exon

LOC116988290
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988290
product: proto-oncogene tyrosine-protein kinase Yrk-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033044850.1
SIO_010081: LOC116988290
subclass of: SO_0000673
so part of: LOC116988290
location: join(1168843..1169088,1176946..1177206,1178452..1178551,1182446..1182544,1183513..1183616,1184952..1185101,1189183..1189347,1193331..1193510,1197422..1197498,1198765..1198918,1201978..1202109,1204234..1205141)
location: region:1168843-1205141:1
so has part: feature:1168843-1169088:1:exon
so has part: feature:1176946-1177206:1:exon
so has part: feature:1178452-1178551:1:exon
so has part: feature:1182446-1182544:1:exon
so has part: feature:1183513-1183616:1:exon
so has part: feature:1184952-1185101:1:exon
so has part: feature:1189183-1189347:1:exon
so has part: feature:1193331-1193510:1:exon
so has part: feature:1197422-1197498:1:exon
so has part: feature:1198765-1198918:1:exon
so has part: feature:1201978-1202109:1:exon
so has part: feature:1204234-1205141:1:exon

position:1168843:1
position: 1168843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1205141:1
position: 1205141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1168843-1169088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176946-1177206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1178452-1178551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182446-1182544:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1183513-1183616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1184952-1185101:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1189183-1189347:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1193331-1193510:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197422-1197498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1198765-1198918:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1201978-1202109:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1204234-1205141:1:exon

LOC116988290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene tyrosine-protein kinase Yrk-like isoform X1
translation: MCRGTDHLTGSCLWDCWTMGCVHCKEKGSAKSQANDGDGFFKQNANPRYGPEPTSQAPTAIFNRIPDFNTFHESANTALSPFGGSLGYLSGSMPTRAGVVPGGVTLFVALYDYDARTEDDLTFRKGEKFHIINSSEGDWWEARSLTTGQTGYIPSNYVAPVDSIQAEEWYFGKMGRKDAERLLLCPGNPRGTFLIRESETTKGAYSLSIRDWDEVKADHVKHYKVRKLDNGGYYITTRAQFETVQQLVHHYTDRAAGLCCRLVVPCHKGMPKLADLSVKTKDVWEIPRESLQLIKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMTQGSLLDFLKDGDGRILKLPQLVDMSAQIAAGMAYIERMNYIHRDLRAANILVGENLMCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGKFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPNACPASLHELMIQCWKKDPEERHTFEYLQSFLEDYFTATEPQYQPGENL
SIO_010081: LOC116988290
subclass of: SO_0000673
so part of: LOC116988290
location: join(1169046..1169088,1176946..1177206,1178452..1178551,1182446..1182544,1183513..1183616,1184952..1185101,1189183..1189347,1193331..1193510,1197422..1197498,1198765..1198918,1201978..1202109,1204234..1204442)
location: region:1169046-1204442:1
so has part: feature:1169046-1169088:1:exon
so has part: feature:1176946-1177206:1:exon
so has part: feature:1178452-1178551:1:exon
so has part: feature:1182446-1182544:1:exon
so has part: feature:1183513-1183616:1:exon
so has part: feature:1184952-1185101:1:exon
so has part: feature:1189183-1189347:1:exon
so has part: feature:1193331-1193510:1:exon
so has part: feature:1197422-1197498:1:exon
so has part: feature:1198765-1198918:1:exon
so has part: feature:1201978-1202109:1:exon
so has part: feature:1204234-1204442:1:exon

XP_032900741.1
type: Protein
SIO_000068: ncbiprotein

position:1169046:1
position: 1169046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1204442:1
position: 1204442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1169046-1169088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176946-1177206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1178452-1178551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182446-1182544:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1183513-1183616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1184952-1185101:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1189183-1189347:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1193331-1193510:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197422-1197498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1198765-1198918:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1201978-1202109:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1204234-1204442:1:exon

LOC116988290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fyn-like isoform X2
translation: MCRGTDHLTGSCLWDCWTMGCVHCKEKGSAKSQANDGDGFFKQNANPRYGPEPTSQAPTAIFNRIPDFNTFHESANTALSPFGGSLGYLSGSMPTRAGVVPGGVTLFVALYDYDARTEDDLTFRKGEKFHIINSSEGDWWEARSLTTGQTGYIPSNYVAPVDSIQAEEWYFGKMGRKDAERLLLCPGNPRGTFLIRESETTKGAYSLSIRDWDEVKADHVKHYKVRKLDNGGYYITTRAQFETVQQLVHHYTDHTDGLCQVLTKVCPNEIPQTLGLGRDAWEINRQSLSLDKKLGQGCFGDVFMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMTQGSLLDFLKDGDGRILKLPQLVDMSAQIAAGMAYIERMNYIHRDLRAANILVGENLMCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGKFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPNACPASLHELMIQCWKKDPEERHTFEYLQSFLEDYFTATEPQYQPGENL
SIO_010081: LOC116988290
subclass of: SO_0000673
so part of: LOC116988290
location: join(1169046..1169088,1176946..1177206,1178452..1178551,1182446..1182544,1183513..1183616,1184952..1185101,1190771..1190926,1193331..1193510,1197422..1197498,1198765..1198918,1201978..1202109,1204234..1204442)
location: region:1169046-1204442:1
so has part: feature:1169046-1169088:1:exon
so has part: feature:1176946-1177206:1:exon
so has part: feature:1178452-1178551:1:exon
so has part: feature:1182446-1182544:1:exon
so has part: feature:1183513-1183616:1:exon
so has part: feature:1184952-1185101:1:exon
so has part: feature:1190771-1190926:1:exon
so has part: feature:1193331-1193510:1:exon
so has part: feature:1197422-1197498:1:exon
so has part: feature:1198765-1198918:1:exon
so has part: feature:1201978-1202109:1:exon
so has part: feature:1204234-1204442:1:exon

XP_032900743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1169046-1169088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176946-1177206:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1178452-1178551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182446-1182544:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1183513-1183616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1184952-1185101:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1190771-1190926:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1193331-1193510:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197422-1197498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1198765-1198918:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1201978-1202109:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1204234-1204442:1:exon

LOC116988290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene tyrosine-protein kinase Yrk-like isoform X3
translation: MGCVHCKEKGSAKSQANDGDGFFKQNANPRYGPEPTSQAPTAIFNRIPDFNTFHESANTALSPFGGSLGYLSGSMPTRAGVVPGGVTLFVALYDYDARTEDDLTFRKGEKFHIINSSEGDWWEARSLTTGQTGYIPSNYVAPVDSIQAEEWYFGKMGRKDAERLLLCPGNPRGTFLIRESETTKGAYSLSIRDWDEVKADHVKHYKVRKLDNGGYYITTRAQFETVQQLVHHYTDRAAGLCCRLVVPCHKGMPKLADLSVKTKDVWEIPRESLQLIKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMTQGSLLDFLKDGDGRILKLPQLVDMSAQIAAGMAYIERMNYIHRDLRAANILVGENLMCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGKFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPNACPASLHELMIQCWKKDPEERHTFEYLQSFLEDYFTATEPQYQPGENL
SIO_010081: LOC116988290
subclass of: SO_0000673
so part of: LOC116988290
location: join(1176957..1177206,1178452..1178551,1182446..1182544,1183513..1183616,1184952..1185101,1189183..1189347,1193331..1193510,1197422..1197498,1198765..1198918,1201978..1202109,1204234..1204442)
location: region:1176957-1204442:1
so has part: feature:1176957-1177206:1:exon
so has part: feature:1178452-1178551:1:exon
so has part: feature:1182446-1182544:1:exon
so has part: feature:1183513-1183616:1:exon
so has part: feature:1184952-1185101:1:exon
so has part: feature:1189183-1189347:1:exon
so has part: feature:1193331-1193510:1:exon
so has part: feature:1197422-1197498:1:exon
so has part: feature:1198765-1198918:1:exon
so has part: feature:1201978-1202109:1:exon
so has part: feature:1204234-1204442:1:exon

XP_032900744.1
type: Protein
SIO_000068: ncbiprotein

position:1176957:1
position: 1176957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176957-1177206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1178452-1178551:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1182446-1182544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1183513-1183616:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184952-1185101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189183-1189347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193331-1193510:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1197422-1197498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1198765-1198918:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1201978-1202109:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1204234-1204442:1:exon

LOC116988290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene tyrosine-protein kinase Yrk-like isoform X3
translation: MGCVHCKEKGSAKSQANDGDGFFKQNANPRYGPEPTSQAPTAIFNRIPDFNTFHESANTALSPFGGSLGYLSGSMPTRAGVVPGGVTLFVALYDYDARTEDDLTFRKGEKFHIINSSEGDWWEARSLTTGQTGYIPSNYVAPVDSIQAEEWYFGKMGRKDAERLLLCPGNPRGTFLIRESETTKGAYSLSIRDWDEVKADHVKHYKVRKLDNGGYYITTRAQFETVQQLVHHYTDRAAGLCCRLVVPCHKGMPKLADLSVKTKDVWEIPRESLQLIKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMTQGSLLDFLKDGDGRILKLPQLVDMSAQIAAGMAYIERMNYIHRDLRAANILVGENLMCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGKFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPNACPASLHELMIQCWKKDPEERHTFEYLQSFLEDYFTATEPQYQPGENL
SIO_010081: LOC116988290
subclass of: SO_0000673
so part of: LOC116988290
location: join(1176957..1177206,1178452..1178551,1182446..1182544,1183513..1183616,1184952..1185101,1189183..1189347,1193331..1193510,1197422..1197498,1198765..1198918,1201978..1202109,1204234..1204442)
location: region:1176957-1204442:1
so has part: feature:1176957-1177206:1:exon
so has part: feature:1178452-1178551:1:exon
so has part: feature:1182446-1182544:1:exon
so has part: feature:1183513-1183616:1:exon
so has part: feature:1184952-1185101:1:exon
so has part: feature:1189183-1189347:1:exon
so has part: feature:1193331-1193510:1:exon
so has part: feature:1197422-1197498:1:exon
so has part: feature:1198765-1198918:1:exon
so has part: feature:1201978-1202109:1:exon
so has part: feature:1204234-1204442:1:exon

XP_032900745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1176957-1177206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1178452-1178551:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1182446-1182544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1183513-1183616:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184952-1185101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189183-1189347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193331-1193510:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1197422-1197498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1198765-1198918:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1201978-1202109:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1204234-1204442:1:exon

LOC116988290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene tyrosine-protein kinase Yrk-like isoform X3
translation: MGCVHCKEKGSAKSQANDGDGFFKQNANPRYGPEPTSQAPTAIFNRIPDFNTFHESANTALSPFGGSLGYLSGSMPTRAGVVPGGVTLFVALYDYDARTEDDLTFRKGEKFHIINSSEGDWWEARSLTTGQTGYIPSNYVAPVDSIQAEEWYFGKMGRKDAERLLLCPGNPRGTFLIRESETTKGAYSLSIRDWDEVKADHVKHYKVRKLDNGGYYITTRAQFETVQQLVHHYTDRAAGLCCRLVVPCHKGMPKLADLSVKTKDVWEIPRESLQLIKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMTQGSLLDFLKDGDGRILKLPQLVDMSAQIAAGMAYIERMNYIHRDLRAANILVGENLMCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGKFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPNACPASLHELMIQCWKKDPEERHTFEYLQSFLEDYFTATEPQYQPGENL
SIO_010081: LOC116988290
subclass of: SO_0000673
so part of: LOC116988290
location: join(1176957..1177206,1178452..1178551,1182446..1182544,1183513..1183616,1184952..1185101,1189183..1189347,1193331..1193510,1197422..1197498,1198765..1198918,1201978..1202109,1204234..1204442)
location: region:1176957-1204442:1
so has part: feature:1176957-1177206:1:exon
so has part: feature:1178452-1178551:1:exon
so has part: feature:1182446-1182544:1:exon
so has part: feature:1183513-1183616:1:exon
so has part: feature:1184952-1185101:1:exon
so has part: feature:1189183-1189347:1:exon
so has part: feature:1193331-1193510:1:exon
so has part: feature:1197422-1197498:1:exon
so has part: feature:1198765-1198918:1:exon
so has part: feature:1201978-1202109:1:exon
so has part: feature:1204234-1204442:1:exon

XP_032900746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1176957-1177206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1178452-1178551:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1182446-1182544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1183513-1183616:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184952-1185101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189183-1189347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193331-1193510:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1197422-1197498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1198765-1198918:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1201978-1202109:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1204234-1204442:1:exon

LOC116988290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene tyrosine-protein kinase Yrk-like isoform X3
translation: MGCVHCKEKGSAKSQANDGDGFFKQNANPRYGPEPTSQAPTAIFNRIPDFNTFHESANTALSPFGGSLGYLSGSMPTRAGVVPGGVTLFVALYDYDARTEDDLTFRKGEKFHIINSSEGDWWEARSLTTGQTGYIPSNYVAPVDSIQAEEWYFGKMGRKDAERLLLCPGNPRGTFLIRESETTKGAYSLSIRDWDEVKADHVKHYKVRKLDNGGYYITTRAQFETVQQLVHHYTDRAAGLCCRLVVPCHKGMPKLADLSVKTKDVWEIPRESLQLIKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMTQGSLLDFLKDGDGRILKLPQLVDMSAQIAAGMAYIERMNYIHRDLRAANILVGENLMCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGKFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPNACPASLHELMIQCWKKDPEERHTFEYLQSFLEDYFTATEPQYQPGENL
SIO_010081: LOC116988290
subclass of: SO_0000673
so part of: LOC116988290
location: join(1176957..1177206,1178452..1178551,1182446..1182544,1183513..1183616,1184952..1185101,1189183..1189347,1193331..1193510,1197422..1197498,1198765..1198918,1201978..1202109,1204234..1204442)
location: region:1176957-1204442:1
so has part: feature:1176957-1177206:1:exon
so has part: feature:1178452-1178551:1:exon
so has part: feature:1182446-1182544:1:exon
so has part: feature:1183513-1183616:1:exon
so has part: feature:1184952-1185101:1:exon
so has part: feature:1189183-1189347:1:exon
so has part: feature:1193331-1193510:1:exon
so has part: feature:1197422-1197498:1:exon
so has part: feature:1198765-1198918:1:exon
so has part: feature:1201978-1202109:1:exon
so has part: feature:1204234-1204442:1:exon

XP_032900747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1176957-1177206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1178452-1178551:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1182446-1182544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1183513-1183616:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184952-1185101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189183-1189347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193331-1193510:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1197422-1197498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1198765-1198918:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1201978-1202109:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1204234-1204442:1:exon

LOC116988198
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1215511..1218933)
location: region:1215511-1218933:-1
so has part: feature:1215511-1218933:-1:exon
subclass of: SO_0000010

116988198
type: Gene
SIO_000068: ncbigene

position:1215511:-1
position: 1215511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218933:-1
position: 1218933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1215511-1218933:-1:exon

LOC116988198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988198
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033044748.1
SIO_010081: LOC116988198
subclass of: SO_0000673
so part of: LOC116988198
location: complement(join(1215511..1216525,1218767..1218933))
location: region:1215511-1218933:-1
so has part: feature:1218767-1218933:-1:exon
so has part: feature:1215511-1216525:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1218767-1218933:-1:exon

position:1218767:-1
position: 1218767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1215511-1216525:-1:exon

position:1216525:-1
position: 1216525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MTDTWKQPFLELQKVYYIALCSLGIPGNLFAIYIICCRACGLSKTTTIYLVALAVSDTLCLVWAGILNLTKLWQAPGSSWVYTHWWCTSIVLEYATILLSVWITTAFTIERYLVLFNKRLQLQVAKPRNTLWALVLTVILSLALTTMAFMMNVFARHSLAATVWVSRNFSSGQRRECGPSNRTRNPATIWLHTVISGGVPYLLILVFSTLIAYRLHKGTKIHSESDNAAFKTTRIRTRRSAHIMLVVSFAAVALGLPRFISECLPSSLDGLNYFDYSVVSSVVPDILFMLQWFNSAINFWLFCSASSAFRQECWTILTFTNCRRKPPVHVATLPINTLKSVYRLTQLKTQTPLQLPKN
SIO_010081: LOC116988198
subclass of: SO_0000673
so part of: LOC116988198
location: complement(join(1215528..1216525,1218767..1218845))
location: region:1215528-1218845:-1
so has part: feature:1218767-1218845:-1:exon
so has part: feature:1215528-1216525:-1:exon

XP_032900639.1
type: Protein
SIO_000068: ncbiprotein

position:1215528:-1
position: 1215528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218845:-1
position: 1218845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1218767-1218845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1215528-1216525:-1:exon

ahdc1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ahdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1253776..1414326
location: region:1253776-1414326:1
so has part: feature:1253776-1414326:1:exon
subclass of: SO_0000010

116988291
type: Gene
SIO_000068: ncbigene

position:1253776:1
position: 1253776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414326:1
position: 1414326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1253776-1414326:1:exon

ahdc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ahdc1
product: AT-hook DNA binding motif containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033044860.1
SIO_010081: ahdc1
subclass of: SO_0000673
so part of: ahdc1
location: join(1253776..1253806,1381339..1381439,1388586..1388623,1398264..1402058,1412814..1414326)
location: region:1253776-1414326:1
so has part: feature:1253776-1253806:1:exon
so has part: feature:1381339-1381439:1:exon
so has part: feature:1388586-1388623:1:exon
so has part: feature:1398264-1402058:1:exon
so has part: feature:1412814-1414326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1253776-1253806:1:exon

position:1253806:1
position: 1253806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1381339-1381439:1:exon

position:1381339:1
position: 1381339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381439:1
position: 1381439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1388586-1388623:1:exon

position:1388586:1
position: 1388586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388623:1
position: 1388623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1398264-1402058:1:exon

position:1398264:1
position: 1398264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1402058:1
position: 1402058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1412814-1414326:1:exon

position:1412814:1
position: 1412814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ahdc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ahdc1
product: AT-hook DNA binding motif containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033044858.1
SIO_010081: ahdc1
subclass of: SO_0000673
so part of: ahdc1
location: join(1326893..1327502,1381339..1381439,1388586..1388623,1398264..1402058,1412814..1414326)
location: region:1326893-1414326:1
so has part: feature:1326893-1327502:1:exon
so has part: feature:1381339-1381439:1:exon
so has part: feature:1388586-1388623:1:exon
so has part: feature:1398264-1402058:1:exon
so has part: feature:1412814-1414326:1:exon

position:1326893:1
position: 1326893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1326893-1327502:1:exon

position:1327502:1
position: 1327502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1381339-1381439:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1388586-1388623:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1398264-1402058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1412814-1414326:1:exon

ahdc1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: ahdc1
product: AT-hook DNA binding motif containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004415907.1
SIO_010081: ahdc1
so part of: ahdc1
location: join(1326893..1327502,1381339..1381439,1388586..1388623,1398264..1402058,1412814..1413137,1413610..1414326)
location: region:1326893-1414326:1
so has part: feature:1326893-1327502:1:exon
so has part: feature:1381339-1381439:1:exon
so has part: feature:1388586-1388623:1:exon
so has part: feature:1398264-1402058:1:exon
so has part: feature:1412814-1413137:1:exon
so has part: feature:1413610-1414326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1326893-1327502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1381339-1381439:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1388586-1388623:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1398264-1402058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1412814-1413137:1:exon

position:1413137:1
position: 1413137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1413610-1414326:1:exon

position:1413610:1
position: 1413610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ahdc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ahdc1
product: AT-hook DNA binding motif containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033044861.1
SIO_010081: ahdc1
subclass of: SO_0000673
so part of: ahdc1
location: join(1326893..1327502,1388586..1388623,1398264..1402058,1412814..1414326)
location: region:1326893-1414326:1
so has part: feature:1326893-1327502:1:exon
so has part: feature:1388586-1388623:1:exon
so has part: feature:1398264-1402058:1:exon
so has part: feature:1412814-1414326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1326893-1327502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1388586-1388623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1398264-1402058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1412814-1414326:1:exon

ahdc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ahdc1
product: AT-hook DNA binding motif containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033044859.1
SIO_010081: ahdc1
subclass of: SO_0000673
so part of: ahdc1
location: join(1380311..1380333,1381339..1381439,1388586..1388623,1398264..1402058,1412814..1414326)
location: region:1380311-1414326:1
so has part: feature:1380311-1380333:1:exon
so has part: feature:1381339-1381439:1:exon
so has part: feature:1388586-1388623:1:exon
so has part: feature:1398264-1402058:1:exon
so has part: feature:1412814-1414326:1:exon

position:1380311:1
position: 1380311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1380311-1380333:1:exon

position:1380333:1
position: 1380333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1381339-1381439:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1388586-1388623:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1398264-1402058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1412814-1414326:1:exon

ahdc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ahdc1
product: AT-hook DNA binding motif containing 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033044863.1
SIO_010081: ahdc1
subclass of: SO_0000673
so part of: ahdc1
location: join(1382632..1383222,1388586..1388623,1398264..1402058,1412814..1414326)
location: region:1382632-1414326:1
so has part: feature:1382632-1383222:1:exon
so has part: feature:1388586-1388623:1:exon
so has part: feature:1398264-1402058:1:exon
so has part: feature:1412814-1414326:1:exon

position:1382632:1
position: 1382632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382632-1383222:1:exon

position:1383222:1
position: 1383222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1388586-1388623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1398264-1402058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1412814-1414326:1:exon

ahdc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ahdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-hook DNA-binding motif-containing protein 1
translation: MASRRQAMDRVQRKDGADPCERSRHGEFGKFNAGVEALISPAVPNNTFFEDASASPDHRLHVHCESARDALLKHEQGERKLGAILGDTTCKKYALRNKPMVQYGLEQVEYERYYKAVSVPSVSAQACLDYGAAPRLPLKGTMLSRGHKYKCKGSRKMLVKLSRVNIEKYLLQAERKSKACHNSTGSGVKAQFISVPEGDSTTPKKGRRNKVTLLPTGDVPVVKRKRGRPRKVVPEGGGEPANHVKRKPRHHKLSPPQPTYIAGCNDSAADYTDVLSKLAFLTKQSLILGRCSPPRCWSPSEPGSMQRSAALHHDMSHFYRTLAGTRRRGGKAGCSRGRQLGQLAESSSTFSDFFEGIGKRKRVFLGETKLYARKCKWGTEMKEKPVQRRKPYKRTPHFPEHGIFHGVGAGGGDSGDWARQAGDSCWPGGPGYQAKQLRNGLFSSSSSSSSSYPGMSGQSFPSAMWDARSRNGYLMGRLSTGQAGAVLQSPASIAGYFRSLLDSDDSSDLVDVSFSQAGQETCGIAGGGGGGGGGGGFGSTPPSRHLTHFQENFDKTNSPNCSQPAAGQSAVAAASYPLMGSENSDSLDYASSFHSSETESFQRAAAQTTLPRQAGHSCQQACDNFGHYGNYRLRAQGFSGSDAPLQTSREFSGLDFLGTRDCSFGFEASNTSQSSSSSSAATAAATDPYTQHTLATKLHFNASSPFNCSTRPDPRSPMSLQTPLASDTQSDSACSMDHPSSQKYFGSTQLSGDGRMAFFRGLQLGGTSGFNLPEGCMAHFNHRYSPVLDYNSLNESKDILDISNYTPRKAKVRALPDALPESSSHFNAAFGNADGGNEEKSSLSSLEKLMLDWDETIPGERAGGKLCSKRQWNHQQQQQQPPFPSDSRAGYGRRKRADMSSPPHMLFPASPPFLPRKTPAPRQARNTRSPSVSNKKDQSARKSKLLQKMPASSPAFADAPDCALDYGYSGDTPVPTAHTYPVAKGDQKEFCGLYSPSCSRSMPEDTSYPVARFAMAANDIGEAVSGLYPELKQGAGQTEQLQSMGQDHERLLPDTRELFPLHPPGPYGGNLDPTDPAKKLATFYDSLDNSTDIHPPTSRHLLANQLQFEAENASVLETNARYLQNSAAYSSLEETKKDAELSSLFAMQRRNNIPTTARTHNAVAQLEKQAQKLALDYGGSPYSSGTMANASPASSDSSIHLDPGGSYNDKQGGRRVAPMGLLMDHGQEELYTGSASQ
SIO_010081: ahdc1
subclass of: SO_0000673
so part of: ahdc1
location: 1398317..1402030
location: region:1398317-1402030:1
so has part: feature:1398317-1402030:1:exon

XP_032900749.1
type: Protein
SIO_000068: ncbiprotein

position:1398317:1
position: 1398317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1402030:1
position: 1402030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1398317-1402030:1:exon

ahdc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ahdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-hook DNA-binding motif-containing protein 1
translation: MASRRQAMDRVQRKDGADPCERSRHGEFGKFNAGVEALISPAVPNNTFFEDASASPDHRLHVHCESARDALLKHEQGERKLGAILGDTTCKKYALRNKPMVQYGLEQVEYERYYKAVSVPSVSAQACLDYGAAPRLPLKGTMLSRGHKYKCKGSRKMLVKLSRVNIEKYLLQAERKSKACHNSTGSGVKAQFISVPEGDSTTPKKGRRNKVTLLPTGDVPVVKRKRGRPRKVVPEGGGEPANHVKRKPRHHKLSPPQPTYIAGCNDSAADYTDVLSKLAFLTKQSLILGRCSPPRCWSPSEPGSMQRSAALHHDMSHFYRTLAGTRRRGGKAGCSRGRQLGQLAESSSTFSDFFEGIGKRKRVFLGETKLYARKCKWGTEMKEKPVQRRKPYKRTPHFPEHGIFHGVGAGGGDSGDWARQAGDSCWPGGPGYQAKQLRNGLFSSSSSSSSSYPGMSGQSFPSAMWDARSRNGYLMGRLSTGQAGAVLQSPASIAGYFRSLLDSDDSSDLVDVSFSQAGQETCGIAGGGGGGGGGGGFGSTPPSRHLTHFQENFDKTNSPNCSQPAAGQSAVAAASYPLMGSENSDSLDYASSFHSSETESFQRAAAQTTLPRQAGHSCQQACDNFGHYGNYRLRAQGFSGSDAPLQTSREFSGLDFLGTRDCSFGFEASNTSQSSSSSSAATAAATDPYTQHTLATKLHFNASSPFNCSTRPDPRSPMSLQTPLASDTQSDSACSMDHPSSQKYFGSTQLSGDGRMAFFRGLQLGGTSGFNLPEGCMAHFNHRYSPVLDYNSLNESKDILDISNYTPRKAKVRALPDALPESSSHFNAAFGNADGGNEEKSSLSSLEKLMLDWDETIPGERAGGKLCSKRQWNHQQQQQQPPFPSDSRAGYGRRKRADMSSPPHMLFPASPPFLPRKTPAPRQARNTRSPSVSNKKDQSARKSKLLQKMPASSPAFADAPDCALDYGYSGDTPVPTAHTYPVAKGDQKEFCGLYSPSCSRSMPEDTSYPVARFAMAANDIGEAVSGLYPELKQGAGQTEQLQSMGQDHERLLPDTRELFPLHPPGPYGGNLDPTDPAKKLATFYDSLDNSTDIHPPTSRHLLANQLQFEAENASVLETNARYLQNSAAYSSLEETKKDAELSSLFAMQRRNNIPTTARTHNAVAQLEKQAQKLALDYGGSPYSSGTMANASPASSDSSIHLDPGGSYNDKQGGRRVAPMGLLMDHGQEELYTGSASQ
SIO_010081: ahdc1
subclass of: SO_0000673
so part of: ahdc1
location: 1398317..1402030
location: region:1398317-1402030:1
so has part: feature:1398317-1402030:1:exon

XP_032900750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1398317-1402030:1:exon

ahdc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ahdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-hook DNA-binding motif-containing protein 1
translation: MASRRQAMDRVQRKDGADPCERSRHGEFGKFNAGVEALISPAVPNNTFFEDASASPDHRLHVHCESARDALLKHEQGERKLGAILGDTTCKKYALRNKPMVQYGLEQVEYERYYKAVSVPSVSAQACLDYGAAPRLPLKGTMLSRGHKYKCKGSRKMLVKLSRVNIEKYLLQAERKSKACHNSTGSGVKAQFISVPEGDSTTPKKGRRNKVTLLPTGDVPVVKRKRGRPRKVVPEGGGEPANHVKRKPRHHKLSPPQPTYIAGCNDSAADYTDVLSKLAFLTKQSLILGRCSPPRCWSPSEPGSMQRSAALHHDMSHFYRTLAGTRRRGGKAGCSRGRQLGQLAESSSTFSDFFEGIGKRKRVFLGETKLYARKCKWGTEMKEKPVQRRKPYKRTPHFPEHGIFHGVGAGGGDSGDWARQAGDSCWPGGPGYQAKQLRNGLFSSSSSSSSSYPGMSGQSFPSAMWDARSRNGYLMGRLSTGQAGAVLQSPASIAGYFRSLLDSDDSSDLVDVSFSQAGQETCGIAGGGGGGGGGGGFGSTPPSRHLTHFQENFDKTNSPNCSQPAAGQSAVAAASYPLMGSENSDSLDYASSFHSSETESFQRAAAQTTLPRQAGHSCQQACDNFGHYGNYRLRAQGFSGSDAPLQTSREFSGLDFLGTRDCSFGFEASNTSQSSSSSSAATAAATDPYTQHTLATKLHFNASSPFNCSTRPDPRSPMSLQTPLASDTQSDSACSMDHPSSQKYFGSTQLSGDGRMAFFRGLQLGGTSGFNLPEGCMAHFNHRYSPVLDYNSLNESKDILDISNYTPRKAKVRALPDALPESSSHFNAAFGNADGGNEEKSSLSSLEKLMLDWDETIPGERAGGKLCSKRQWNHQQQQQQPPFPSDSRAGYGRRKRADMSSPPHMLFPASPPFLPRKTPAPRQARNTRSPSVSNKKDQSARKSKLLQKMPASSPAFADAPDCALDYGYSGDTPVPTAHTYPVAKGDQKEFCGLYSPSCSRSMPEDTSYPVARFAMAANDIGEAVSGLYPELKQGAGQTEQLQSMGQDHERLLPDTRELFPLHPPGPYGGNLDPTDPAKKLATFYDSLDNSTDIHPPTSRHLLANQLQFEAENASVLETNARYLQNSAAYSSLEETKKDAELSSLFAMQRRNNIPTTARTHNAVAQLEKQAQKLALDYGGSPYSSGTMANASPASSDSSIHLDPGGSYNDKQGGRRVAPMGLLMDHGQEELYTGSASQ
SIO_010081: ahdc1
subclass of: SO_0000673
so part of: ahdc1
location: 1398317..1402030
location: region:1398317-1402030:1
so has part: feature:1398317-1402030:1:exon

XP_032900751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1398317-1402030:1:exon

ahdc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ahdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-hook DNA-binding motif-containing protein 1
translation: MASRRQAMDRVQRKDGADPCERSRHGEFGKFNAGVEALISPAVPNNTFFEDASASPDHRLHVHCESARDALLKHEQGERKLGAILGDTTCKKYALRNKPMVQYGLEQVEYERYYKAVSVPSVSAQACLDYGAAPRLPLKGTMLSRGHKYKCKGSRKMLVKLSRVNIEKYLLQAERKSKACHNSTGSGVKAQFISVPEGDSTTPKKGRRNKVTLLPTGDVPVVKRKRGRPRKVVPEGGGEPANHVKRKPRHHKLSPPQPTYIAGCNDSAADYTDVLSKLAFLTKQSLILGRCSPPRCWSPSEPGSMQRSAALHHDMSHFYRTLAGTRRRGGKAGCSRGRQLGQLAESSSTFSDFFEGIGKRKRVFLGETKLYARKCKWGTEMKEKPVQRRKPYKRTPHFPEHGIFHGVGAGGGDSGDWARQAGDSCWPGGPGYQAKQLRNGLFSSSSSSSSSYPGMSGQSFPSAMWDARSRNGYLMGRLSTGQAGAVLQSPASIAGYFRSLLDSDDSSDLVDVSFSQAGQETCGIAGGGGGGGGGGGFGSTPPSRHLTHFQENFDKTNSPNCSQPAAGQSAVAAASYPLMGSENSDSLDYASSFHSSETESFQRAAAQTTLPRQAGHSCQQACDNFGHYGNYRLRAQGFSGSDAPLQTSREFSGLDFLGTRDCSFGFEASNTSQSSSSSSAATAAATDPYTQHTLATKLHFNASSPFNCSTRPDPRSPMSLQTPLASDTQSDSACSMDHPSSQKYFGSTQLSGDGRMAFFRGLQLGGTSGFNLPEGCMAHFNHRYSPVLDYNSLNESKDILDISNYTPRKAKVRALPDALPESSSHFNAAFGNADGGNEEKSSLSSLEKLMLDWDETIPGERAGGKLCSKRQWNHQQQQQQPPFPSDSRAGYGRRKRADMSSPPHMLFPASPPFLPRKTPAPRQARNTRSPSVSNKKDQSARKSKLLQKMPASSPAFADAPDCALDYGYSGDTPVPTAHTYPVAKGDQKEFCGLYSPSCSRSMPEDTSYPVARFAMAANDIGEAVSGLYPELKQGAGQTEQLQSMGQDHERLLPDTRELFPLHPPGPYGGNLDPTDPAKKLATFYDSLDNSTDIHPPTSRHLLANQLQFEAENASVLETNARYLQNSAAYSSLEETKKDAELSSLFAMQRRNNIPTTARTHNAVAQLEKQAQKLALDYGGSPYSSGTMANASPASSDSSIHLDPGGSYNDKQGGRRVAPMGLLMDHGQEELYTGSASQ
SIO_010081: ahdc1
subclass of: SO_0000673
so part of: ahdc1
location: 1398317..1402030
location: region:1398317-1402030:1
so has part: feature:1398317-1402030:1:exon

XP_032900752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1398317-1402030:1:exon

ahdc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ahdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-hook DNA-binding motif-containing protein 1
translation: MASRRQAMDRVQRKDGADPCERSRHGEFGKFNAGVEALISPAVPNNTFFEDASASPDHRLHVHCESARDALLKHEQGERKLGAILGDTTCKKYALRNKPMVQYGLEQVEYERYYKAVSVPSVSAQACLDYGAAPRLPLKGTMLSRGHKYKCKGSRKMLVKLSRVNIEKYLLQAERKSKACHNSTGSGVKAQFISVPEGDSTTPKKGRRNKVTLLPTGDVPVVKRKRGRPRKVVPEGGGEPANHVKRKPRHHKLSPPQPTYIAGCNDSAADYTDVLSKLAFLTKQSLILGRCSPPRCWSPSEPGSMQRSAALHHDMSHFYRTLAGTRRRGGKAGCSRGRQLGQLAESSSTFSDFFEGIGKRKRVFLGETKLYARKCKWGTEMKEKPVQRRKPYKRTPHFPEHGIFHGVGAGGGDSGDWARQAGDSCWPGGPGYQAKQLRNGLFSSSSSSSSSYPGMSGQSFPSAMWDARSRNGYLMGRLSTGQAGAVLQSPASIAGYFRSLLDSDDSSDLVDVSFSQAGQETCGIAGGGGGGGGGGGFGSTPPSRHLTHFQENFDKTNSPNCSQPAAGQSAVAAASYPLMGSENSDSLDYASSFHSSETESFQRAAAQTTLPRQAGHSCQQACDNFGHYGNYRLRAQGFSGSDAPLQTSREFSGLDFLGTRDCSFGFEASNTSQSSSSSSAATAAATDPYTQHTLATKLHFNASSPFNCSTRPDPRSPMSLQTPLASDTQSDSACSMDHPSSQKYFGSTQLSGDGRMAFFRGLQLGGTSGFNLPEGCMAHFNHRYSPVLDYNSLNESKDILDISNYTPRKAKVRALPDALPESSSHFNAAFGNADGGNEEKSSLSSLEKLMLDWDETIPGERAGGKLCSKRQWNHQQQQQQPPFPSDSRAGYGRRKRADMSSPPHMLFPASPPFLPRKTPAPRQARNTRSPSVSNKKDQSARKSKLLQKMPASSPAFADAPDCALDYGYSGDTPVPTAHTYPVAKGDQKEFCGLYSPSCSRSMPEDTSYPVARFAMAANDIGEAVSGLYPELKQGAGQTEQLQSMGQDHERLLPDTRELFPLHPPGPYGGNLDPTDPAKKLATFYDSLDNSTDIHPPTSRHLLANQLQFEAENASVLETNARYLQNSAAYSSLEETKKDAELSSLFAMQRRNNIPTTARTHNAVAQLEKQAQKLALDYGGSPYSSGTMANASPASSDSSIHLDPGGSYNDKQGGRRVAPMGLLMDHGQEELYTGSASQ
SIO_010081: ahdc1
subclass of: SO_0000673
so part of: ahdc1
location: 1398317..1402030
location: region:1398317-1402030:1
so has part: feature:1398317-1402030:1:exon

XP_032900754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1398317-1402030:1:exon

wasf2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: wasf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1497614..1528826
location: region:1497614-1528826:1
so has part: feature:1497614-1528826:1:exon
subclass of: SO_0000010

116988292
type: Gene
SIO_000068: ncbigene

position:1497614:1
position: 1497614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1528826:1
position: 1528826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1497614-1528826:1:exon

wasf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wasf2
product: WASP family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033044864.1
SIO_010081: wasf2
subclass of: SO_0000673
so part of: wasf2
location: join(1497614..1497675,1515181..1515349,1517588..1517722,1519268..1519421,1522800..1522917,1524473..1524603,1525105..1525257,1525961..1526460,1528324..1528826)
location: region:1497614-1528826:1
so has part: feature:1497614-1497675:1:exon
so has part: feature:1515181-1515349:1:exon
so has part: feature:1517588-1517722:1:exon
so has part: feature:1519268-1519421:1:exon
so has part: feature:1522800-1522917:1:exon
so has part: feature:1524473-1524603:1:exon
so has part: feature:1525105-1525257:1:exon
so has part: feature:1525961-1526460:1:exon
so has part: feature:1528324-1528826:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1497614-1497675:1:exon

position:1497675:1
position: 1497675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1515181-1515349:1:exon

position:1515181:1
position: 1515181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515349:1
position: 1515349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1517588-1517722:1:exon

position:1517588:1
position: 1517588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1517722:1
position: 1517722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1519268-1519421:1:exon

position:1519268:1
position: 1519268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1519421:1
position: 1519421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1522800-1522917:1:exon

position:1522800:1
position: 1522800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1522917:1
position: 1522917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1524473-1524603:1:exon

position:1524473:1
position: 1524473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1524603:1
position: 1524603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1525105-1525257:1:exon

position:1525105:1
position: 1525105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1525257:1
position: 1525257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1525961-1526460:1:exon

position:1525961:1
position: 1525961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1526460:1
position: 1526460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1528324-1528826:1:exon

position:1528324:1
position: 1528324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

wasf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wasf2
product: WASP family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033044865.1
SIO_010081: wasf2
subclass of: SO_0000673
so part of: wasf2
location: join(1497629..1497675,1499558..1499712,1515181..1515349,1517588..1517722,1519268..1519421,1522800..1522917,1524473..1524603,1525105..1525257,1525961..1526460,1528324..1528826)
location: region:1497629-1528826:1
so has part: feature:1497629-1497675:1:exon
so has part: feature:1499558-1499712:1:exon
so has part: feature:1515181-1515349:1:exon
so has part: feature:1517588-1517722:1:exon
so has part: feature:1519268-1519421:1:exon
so has part: feature:1522800-1522917:1:exon
so has part: feature:1524473-1524603:1:exon
so has part: feature:1525105-1525257:1:exon
so has part: feature:1525961-1526460:1:exon
so has part: feature:1528324-1528826:1:exon

position:1497629:1
position: 1497629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1497629-1497675:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1499558-1499712:1:exon

position:1499558:1
position: 1499558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1499712:1
position: 1499712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1515181-1515349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1517588-1517722:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1519268-1519421:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1522800-1522917:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524473-1524603:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1525105-1525257:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1525961-1526460:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1528324-1528826:1:exon

wasf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wasf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 2
translation: MPLVTRNIEPRILVCQPLPSNVLSGIRVCDNTTLSNVIRQLGSLSRYAEDIFGELFQEAGKFASRVNSLGERIDRLQIKVTQLDPKVEDVSLQTINLRKAFKSSTNQDQQMFRRSSLPIPIHDTYNTCDKPPPLTILTPYREDGKDSLKFYTDPSYFFDLWKEKMLQDTKDIMKEKRKHRKEKRDVSNRGNLNPRKIRTRKEEWERLKMGKEFVEAKLIGDDTGMNVNDISPNGSISPNGIDEHVYRTHGVYRDSVTTPPASPGADLPPPPPDFGYAADKQDSSVFKRSSVVSPTIPPPAPPPGPPMGGGFSPPPAAPTLPPPSPFMGIVGPPISPPPPPPSMAPIPFNQHFPGNDAPSMPPPPPPPTDHFPAAPPQMVPPSTGGGAPPPPPPPPPPPGPPPPPSFGNAPPPPAQLKEQKPKVAQEPVSDPRTNLLSAIRQGFQLRKVEEQRQEEEKRDHIGNDVATILSRRIAVEYSDSEESEFDDEEWSD
SIO_010081: wasf2
subclass of: SO_0000673
so part of: wasf2
location: join(1515217..1515349,1517588..1517722,1519268..1519421,1522800..1522917,1524473..1524603,1525105..1525257,1525961..1526460,1528324..1528478)
location: region:1515217-1528478:1
so has part: feature:1515217-1515349:1:exon
so has part: feature:1517588-1517722:1:exon
so has part: feature:1519268-1519421:1:exon
so has part: feature:1522800-1522917:1:exon
so has part: feature:1524473-1524603:1:exon
so has part: feature:1525105-1525257:1:exon
so has part: feature:1525961-1526460:1:exon
so has part: feature:1528324-1528478:1:exon

XP_032900755.1
type: Protein
SIO_000068: ncbiprotein

position:1515217:1
position: 1515217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1528478:1
position: 1528478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1515217-1515349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1517588-1517722:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1519268-1519421:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1522800-1522917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1524473-1524603:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525105-1525257:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1525961-1526460:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1528324-1528478:1:exon

wasf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wasf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 2
translation: MPLVTRNIEPRILVCQPLPSNVLSGIRVCDNTTLSNVIRQLGSLSRYAEDIFGELFQEAGKFASRVNSLGERIDRLQIKVTQLDPKVEDVSLQTINLRKAFKSSTNQDQQMFRRSSLPIPIHDTYNTCDKPPPLTILTPYREDGKDSLKFYTDPSYFFDLWKEKMLQDTKDIMKEKRKHRKEKRDVSNRGNLNPRKIRTRKEEWERLKMGKEFVEAKLIGDDTGMNVNDISPNGSISPNGIDEHVYRTHGVYRDSVTTPPASPGADLPPPPPDFGYAADKQDSSVFKRSSVVSPTIPPPAPPPGPPMGGGFSPPPAAPTLPPPSPFMGIVGPPISPPPPPPSMAPIPFNQHFPGNDAPSMPPPPPPPTDHFPAAPPQMVPPSTGGGAPPPPPPPPPPPGPPPPPSFGNAPPPPAQLKEQKPKVAQEPVSDPRTNLLSAIRQGFQLRKVEEQRQEEEKRDHIGNDVATILSRRIAVEYSDSEESEFDDEEWSD
SIO_010081: wasf2
subclass of: SO_0000673
so part of: wasf2
location: join(1515217..1515349,1517588..1517722,1519268..1519421,1522800..1522917,1524473..1524603,1525105..1525257,1525961..1526460,1528324..1528478)
location: region:1515217-1528478:1
so has part: feature:1515217-1515349:1:exon
so has part: feature:1517588-1517722:1:exon
so has part: feature:1519268-1519421:1:exon
so has part: feature:1522800-1522917:1:exon
so has part: feature:1524473-1524603:1:exon
so has part: feature:1525105-1525257:1:exon
so has part: feature:1525961-1526460:1:exon
so has part: feature:1528324-1528478:1:exon

XP_032900756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1515217-1515349:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1517588-1517722:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1519268-1519421:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1522800-1522917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1524473-1524603:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525105-1525257:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1525961-1526460:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1528324-1528478:1:exon

cd164l2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: cd164l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1605552..1633927
location: region:1605552-1633927:1
so has part: feature:1605552-1633927:1:exon
subclass of: SO_0000010

116988293
type: Gene
SIO_000068: ncbigene

position:1605552:1
position: 1605552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1633927:1
position: 1633927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1605552-1633927:1:exon

cd164l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cd164l2
product: CD164 molecule like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033044868.1
SIO_010081: cd164l2
subclass of: SO_0000673
so part of: cd164l2
location: join(1605552..1605589,1606935..1607041,1612596..1612685,1621988..1622062,1623788..1623820,1627826..1627991,1633236..1633927)
location: region:1605552-1633927:1
so has part: feature:1605552-1605589:1:exon
so has part: feature:1606935-1607041:1:exon
so has part: feature:1612596-1612685:1:exon
so has part: feature:1621988-1622062:1:exon
so has part: feature:1623788-1623820:1:exon
so has part: feature:1627826-1627991:1:exon
so has part: feature:1633236-1633927:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1605552-1605589:1:exon

position:1605589:1
position: 1605589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1606935-1607041:1:exon

position:1606935:1
position: 1606935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1607041:1
position: 1607041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1612596-1612685:1:exon

position:1612596:1
position: 1612596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1612685:1
position: 1612685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1621988-1622062:1:exon

position:1621988:1
position: 1621988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1622062:1
position: 1622062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1623788-1623820:1:exon

position:1623788:1
position: 1623788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1623820:1
position: 1623820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1627826-1627991:1:exon

position:1627826:1
position: 1627826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627991:1
position: 1627991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1633236-1633927:1:exon

position:1633236:1
position: 1633236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cd164l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cd164l2
product: CD164 molecule like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033044866.1
SIO_010081: cd164l2
subclass of: SO_0000673
so part of: cd164l2
location: join(1605552..1605589,1606935..1607041,1612596..1612685,1621988..1622062,1623788..1623820,1627826..1627991,1629423..1629975)
location: region:1605552-1629975:1
so has part: feature:1605552-1605589:1:exon
so has part: feature:1606935-1607041:1:exon
so has part: feature:1612596-1612685:1:exon
so has part: feature:1621988-1622062:1:exon
so has part: feature:1623788-1623820:1:exon
so has part: feature:1627826-1627991:1:exon
so has part: feature:1629423-1629975:1:exon

position:1629975:1
position: 1629975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1605552-1605589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1606935-1607041:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1612596-1612685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621988-1622062:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1623788-1623820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1627826-1627991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1629423-1629975:1:exon

position:1629423:1
position: 1629423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cd164l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cd164l2
product: CD164 molecule like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033044867.1
SIO_010081: cd164l2
subclass of: SO_0000673
so part of: cd164l2
location: join(1605552..1605589,1606935..1607041,1612596..1612685,1621988..1622062,1623788..1623820,1627826..1627991,1629426..1629975)
location: region:1605552-1629975:1
so has part: feature:1605552-1605589:1:exon
so has part: feature:1606935-1607041:1:exon
so has part: feature:1612596-1612685:1:exon
so has part: feature:1621988-1622062:1:exon
so has part: feature:1623788-1623820:1:exon
so has part: feature:1627826-1627991:1:exon
so has part: feature:1629426-1629975:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1605552-1605589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1606935-1607041:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1612596-1612685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621988-1622062:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1623788-1623820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1627826-1627991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1629426-1629975:1:exon

position:1629426:1
position: 1629426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cd164l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cd164l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD164 sialomucin-like 2 protein isoform X3
translation: MQAASVCSRSEERSGEMNMRSLGSWLGLYLALLLSRVSGEEPAECAELETCDRCTTGDASLNLTDCVWVHCESETFCIAKDKNNLTDCTVHSEPSMCEAITTTKEAITAEADTTSEVPTTAPVYSPSSFDPASFIGGMVLVLGAEAAFFFAIKFFKARDGTYQTLI
SIO_010081: cd164l2
subclass of: SO_0000673
so part of: cd164l2
location: join(1605567..1605589,1606935..1607041,1612596..1612685,1621988..1622062,1623788..1623820,1627826..1627991,1633236..1633242)
location: region:1605567-1633242:1
so has part: feature:1605567-1605589:1:exon
so has part: feature:1606935-1607041:1:exon
so has part: feature:1612596-1612685:1:exon
so has part: feature:1621988-1622062:1:exon
so has part: feature:1623788-1623820:1:exon
so has part: feature:1627826-1627991:1:exon
so has part: feature:1633236-1633242:1:exon

XP_032900759.1
type: Protein
SIO_000068: ncbiprotein

position:1605567:1
position: 1605567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1633242:1
position: 1633242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1605567-1605589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1606935-1607041:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1612596-1612685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621988-1622062:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1623788-1623820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1627826-1627991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1633236-1633242:1:exon

cd164l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cd164l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD164 sialomucin-like 2 protein isoform X1
translation: MQAASVCSRSEERSGEMNMRSLGSWLGLYLALLLSRVSGEEPAECAELETCDRCTTGDASLNLTDCVWVHCESETFCIAKDKNNLTDCTVHSEPSMCEAITTTKEAITAEADTTSEVPTTAPVYSPSSFDPASFIGGMVLVLGAEAAFFFAIKFFKARDGTYQTLSEEGQ
SIO_010081: cd164l2
subclass of: SO_0000673
so part of: cd164l2
location: join(1605567..1605589,1606935..1607041,1612596..1612685,1621988..1622062,1623788..1623820,1627826..1627991,1629423..1629441)
location: region:1605567-1629441:1
so has part: feature:1605567-1605589:1:exon
so has part: feature:1606935-1607041:1:exon
so has part: feature:1612596-1612685:1:exon
so has part: feature:1621988-1622062:1:exon
so has part: feature:1623788-1623820:1:exon
so has part: feature:1627826-1627991:1:exon
so has part: feature:1629423-1629441:1:exon

XP_032900757.1
type: Protein
SIO_000068: ncbiprotein

position:1629441:1
position: 1629441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1605567-1605589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1606935-1607041:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1612596-1612685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621988-1622062:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1623788-1623820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1627826-1627991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1629423-1629441:1:exon

cd164l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cd164l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD164 sialomucin-like 2 protein isoform X2
translation: MQAASVCSRSEERSGEMNMRSLGSWLGLYLALLLSRVSGEEPAECAELETCDRCTTGDASLNLTDCVWVHCESETFCIAKDKNNLTDCTVHSEPSMCEAITTTKEAITAEADTTSEVPTTAPVYSPSSFDPASFIGGMVLVLGAEAAFFFAIKFFKARDGTYQTLEEGQ
SIO_010081: cd164l2
subclass of: SO_0000673
so part of: cd164l2
location: join(1605567..1605589,1606935..1607041,1612596..1612685,1621988..1622062,1623788..1623820,1627826..1627991,1629426..1629441)
location: region:1605567-1629441:1
so has part: feature:1605567-1605589:1:exon
so has part: feature:1606935-1607041:1:exon
so has part: feature:1612596-1612685:1:exon
so has part: feature:1621988-1622062:1:exon
so has part: feature:1623788-1623820:1:exon
so has part: feature:1627826-1627991:1:exon
so has part: feature:1629426-1629441:1:exon

XP_032900758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1605567-1605589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1606935-1607041:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1612596-1612685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621988-1622062:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1623788-1623820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1627826-1627991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1629426-1629441:1:exon

cd164l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cd164l2
product: CD164 molecule like 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033044869.1
SIO_010081: cd164l2
subclass of: SO_0000673
so part of: cd164l2
location: join(1606614..1607041,1612596..1612685,1621988..1622062,1623788..1623820,1627826..1627991,1629423..1629975)
location: region:1606614-1629975:1
so has part: feature:1606614-1607041:1:exon
so has part: feature:1612596-1612685:1:exon
so has part: feature:1621988-1622062:1:exon
so has part: feature:1623788-1623820:1:exon
so has part: feature:1627826-1627991:1:exon
so has part: feature:1629423-1629975:1:exon

position:1606614:1
position: 1606614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1606614-1607041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1612596-1612685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1621988-1622062:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1623788-1623820:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1627826-1627991:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1629423-1629975:1:exon

cd164l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cd164l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD164 sialomucin-like 2 protein isoform X4
translation: MNMRSLGSWLGLYLALLLSRVSGEEPAECAELETCDRCTTGDASLNLTDCVWVHCESETFCIAKDKNNLTDCTVHSEPSMCEAITTTKEAITAEADTTSEVPTTAPVYSPSSFDPASFIGGMVLVLGAEAAFFFAIKFFKARDGTYQTLSEEGQ
SIO_010081: cd164l2
subclass of: SO_0000673
so part of: cd164l2
location: join(1606960..1607041,1612596..1612685,1621988..1622062,1623788..1623820,1627826..1627991,1629423..1629441)
location: region:1606960-1629441:1
so has part: feature:1606960-1607041:1:exon
so has part: feature:1612596-1612685:1:exon
so has part: feature:1621988-1622062:1:exon
so has part: feature:1623788-1623820:1:exon
so has part: feature:1627826-1627991:1:exon
so has part: feature:1629423-1629441:1:exon

XP_032900760.1
type: Protein
SIO_000068: ncbiprotein

position:1606960:1
position: 1606960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1606960-1607041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1612596-1612685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1621988-1622062:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1623788-1623820:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1627826-1627991:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1629423-1629441:1:exon

LOC116988205
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1641345..1684398
location: region:1641345-1684398:1
so has part: feature:1641345-1684398:1:exon
subclass of: SO_0000010

116988205
type: Gene
SIO_000068: ncbigene

position:1641345:1
position: 1641345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684398:1
position: 1684398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1641345-1684398:1:exon

LOC116988205
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988205
product: sestrin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033044757.1
SIO_010081: LOC116988205
subclass of: SO_0000673
so part of: LOC116988205
location: join(1641345..1641457,1642246..1642564,1669844..1669909,1676835..1677032,1677674..1677856,1679652..1679879,1682645..1682792,1683560..1683675,1684375..1684398)
location: region:1641345-1684398:1
so has part: feature:1641345-1641457:1:exon
so has part: feature:1642246-1642564:1:exon
so has part: feature:1669844-1669909:1:exon
so has part: feature:1676835-1677032:1:exon
so has part: feature:1677674-1677856:1:exon
so has part: feature:1679652-1679879:1:exon
so has part: feature:1682645-1682792:1:exon
so has part: feature:1683560-1683675:1:exon
so has part: feature:1684375-1684398:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1641345-1641457:1:exon

position:1641457:1
position: 1641457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1642246-1642564:1:exon

position:1642246:1
position: 1642246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1642564:1
position: 1642564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1669844-1669909:1:exon

position:1669844:1
position: 1669844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1669909:1
position: 1669909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1676835-1677032:1:exon

position:1676835:1
position: 1676835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1677032:1
position: 1677032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1677674-1677856:1:exon

position:1677674:1
position: 1677674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1677856:1
position: 1677856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1679652-1679879:1:exon

position:1679652:1
position: 1679652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1679879:1
position: 1679879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1682645-1682792:1:exon

position:1682645:1
position: 1682645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682792:1
position: 1682792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1683560-1683675:1:exon

position:1683560:1
position: 1683560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683675:1
position: 1683675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1684375-1684398:1:exon

position:1684375:1
position: 1684375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sestrin-1-like
translation: MEQEEEGQGCGGAALAPQVLAAGELRKCAELLQSRQRERRAAAMDGAALAVRGCLEQEGAQAELQPLLLLLLRLSRSCPFADIRDRSAGILRAVQDQNVKIPHPIGQGPSSFIPVKEILLEGQDDAERQLFIEAFMSTGRVDNITMVMGLHPRYLESFWKTQYYLLQMDGPLPYHYRHYIALMAAARHQCSYLVGLHISEFLQVGGSPEWLNGLNSVPQKLKNLGEINKILAHRPWLITKEHIEELLRAGENSWSLAELIHAVVLLTHYHSLASFVLGCGLRPDLDQDGGFTFRPPSPRNCDSDSSCSSSGSEDTSNASTSREDLRELEVLMEKMKLLQEGRQSEEASQEEKASRFENEKRESLLVAPADDIESLSSTNLSCFVEDADFGYKDFSRRGEQTPPTFRAQKIRLTNP
SIO_010081: LOC116988205
subclass of: SO_0000673
so part of: LOC116988205
location: join(1642280..1642564,1669844..1669909,1676835..1677032,1677674..1677856,1679652..1679879,1682645..1682792,1683560..1683675,1684375..1684398)
location: region:1642280-1684398:1
so has part: feature:1642280-1642564:1:exon
so has part: feature:1669844-1669909:1:exon
so has part: feature:1676835-1677032:1:exon
so has part: feature:1677674-1677856:1:exon
so has part: feature:1679652-1679879:1:exon
so has part: feature:1682645-1682792:1:exon
so has part: feature:1683560-1683675:1:exon
so has part: feature:1684375-1684398:1:exon

XP_032900648.1
type: Protein
SIO_000068: ncbiprotein

position:1642280:1
position: 1642280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1642280-1642564:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1669844-1669909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1676835-1677032:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1677674-1677856:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1679652-1679879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1682645-1682792:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1683560-1683675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1684375-1684398:1:exon

med18
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: med18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1712232..1717713
location: region:1712232-1717713:1
so has part: feature:1712232-1717713:1:exon
subclass of: SO_0000010

116988294
type: Gene
SIO_000068: ncbigene

position:1712232:1
position: 1712232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1717713:1
position: 1717713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1712232-1717713:1:exon

med18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: med18
product: mediator complex subunit 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_033044870.1
SIO_010081: med18
subclass of: SO_0000673
so part of: med18
location: join(1712232..1712277,1714155..1714247,1717037..1717713)
location: region:1712232-1717713:1
so has part: feature:1712232-1712277:1:exon
so has part: feature:1714155-1714247:1:exon
so has part: feature:1717037-1717713:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1712232-1712277:1:exon

position:1712277:1
position: 1712277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1714155-1714247:1:exon

position:1714155:1
position: 1714155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1714247:1
position: 1714247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1717037-1717713:1:exon

position:1717037:1
position: 1717037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

med18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: med18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 18
translation: METPPVTVQPVIGGSINMMEYILQGSVLDQSLESLLHRLRGLCDNMEAETFVDHELVFLLKAQQGSPFILRARRAVDKPGLPWHLRYLGQPEVGDKNRSALVRNCVDMAASDSLADFLLEMGFRMDHEFVVKGHVFRKSIMKVVVSKVFRILLPNNLDNIEPLSLSYLVELSVVAPPGQDAVSDDMKNFSEQLKPLVHLEKIDPKRLHQV
SIO_010081: med18
subclass of: SO_0000673
so part of: med18
location: join(1714175..1714247,1717037..1717596)
location: region:1714175-1717596:1
so has part: feature:1714175-1714247:1:exon
so has part: feature:1717037-1717596:1:exon

XP_032900761.1
type: Protein
SIO_000068: ncbiprotein

position:1714175:1
position: 1714175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1717596:1
position: 1717596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1714175-1714247:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1717037-1717596:1:exon

LOC116988295
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988295
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1822040..1925421)
location: region:1822040-1925421:-1
so has part: feature:1822040-1925421:-1:exon
subclass of: SO_0000010

116988295
type: Gene
SIO_000068: ncbigene

position:1822040:-1
position: 1822040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1925421:-1
position: 1925421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1822040-1925421:-1:exon

LOC116988295
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988295
product: forkhead box protein O3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033044872.1
SIO_010081: LOC116988295
subclass of: SO_0000673
so part of: LOC116988295
location: complement(join(1822040..1824191,1924684..1925145,1925366..1925421))
location: region:1822040-1925421:-1
so has part: feature:1925366-1925421:-1:exon
so has part: feature:1924684-1925145:-1:exon
so has part: feature:1822040-1824191:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1925366-1925421:-1:exon

position:1925366:-1
position: 1925366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1924684-1925145:-1:exon

position:1924684:-1
position: 1924684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1925145:-1
position: 1925145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1822040-1824191:-1:exon

position:1824191:-1
position: 1824191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988295
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein O3-like
translation: MEVAAASQADIDPDFEPQSRPRSCTWPLPRPEVLEGEGNGPGGDCPPAAAAAATAPGGVPAEARVGAASQAALGGADNSQHRKKSSRRNAWGNLSYADLITRAIESSPDKRLTLSQIYDWMVRHIPYFKDKGDSNSSAGWKNSIRHNLSLHSRFIRVQNEGTGKSSWWMLNPDVSKSGKSPRRRAASMDSSSSSKFLKSKRGASKKKASLQAGQEGSEGSSPSGQLAKWSGSPASLHASDEFDVWTEFRSRANSAASTLSGRLSPIMANSEMDELEDDEEETPSSPLLYPSPSSTLSPSVATTHNCSAELPRLADMAGTINLNEALTENLLEELQDKYNMSPAQHIPAPCLRSRSSSFSFGSKCPAVAGGYSPALYSPAAITVLRHSPMQTIQENKQVTFSTINHYGNRMLQDLLSPESLRHKEVMMSQSDPLMPQAQRHMLMCGGETSLSPFNAQSPRLINGDPFHRPLPAPSAAPPLSNGALASSSSSPTGLMHMHSDTGHLAITAHHLHSQLHSLASHGLQMDGTDSRLAHCHAAHHHLPTAGHDRFPADLDLDMFHGSLDCDVESIILNEFMENEELDFNFDCALPTQTAGINMVSSLPTAPQTSNQSWVPG
SIO_010081: LOC116988295
subclass of: SO_0000673
so part of: LOC116988295
location: complement(join(1822764..1824191,1924684..1925106))
location: region:1822764-1925106:-1
so has part: feature:1924684-1925106:-1:exon
so has part: feature:1822764-1824191:-1:exon

XP_032900763.1
type: Protein
SIO_000068: ncbiprotein

position:1822764:-1
position: 1822764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1925106:-1
position: 1925106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1924684-1925106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1822764-1824191:-1:exon

LOC116988206
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1956340..1998030
location: region:1956340-1998030:1
so has part: feature:1956340-1998030:1:exon
subclass of: SO_0000010

116988206
type: Gene
SIO_000068: ncbigene

position:1956340:1
position: 1956340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1998030:1
position: 1998030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1956340-1998030:1:exon

LOC116988206
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988206
product: polycomb protein SCMH1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033044758.1
SIO_010081: LOC116988206
subclass of: SO_0000673
so part of: LOC116988206
location: join(1956340..1956567,1958724..1958939,1968987..1969060,1970505..1970582,1985766..1985836,1988010..1988244,1991592..1991680,1993226..1993470,1997940..1998030)
location: region:1956340-1998030:1
so has part: feature:1956340-1956567:1:exon
so has part: feature:1958724-1958939:1:exon
so has part: feature:1968987-1969060:1:exon
so has part: feature:1970505-1970582:1:exon
so has part: feature:1985766-1985836:1:exon
so has part: feature:1988010-1988244:1:exon
so has part: feature:1991592-1991680:1:exon
so has part: feature:1993226-1993470:1:exon
so has part: feature:1997940-1998030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1956340-1956567:1:exon

position:1956567:1
position: 1956567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1958724-1958939:1:exon

position:1958724:1
position: 1958724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1958939:1
position: 1958939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1968987-1969060:1:exon

position:1968987:1
position: 1968987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1969060:1
position: 1969060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1970505-1970582:1:exon

position:1970505:1
position: 1970505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1970582:1
position: 1970582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1985766-1985836:1:exon

position:1985766:1
position: 1985766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1985836:1
position: 1985836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1988010-1988244:1:exon

position:1988010:1
position: 1988010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1988244:1
position: 1988244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1991592-1991680:1:exon

position:1991592:1
position: 1991592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1991680:1
position: 1991680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1993226-1993470:1:exon

position:1993226:1
position: 1993226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1993470:1
position: 1993470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1997940-1998030:1:exon

position:1997940:1
position: 1997940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988206
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb protein SCMH1-like
translation: MRKPGPQKVADWKDGRRQKHSRSGRPSNTPSPYQGHFSWDKYLKETGAVAAPSYCFKQSCIPPVNEFKIGMKLEAKDPRNVTSTCIATVVGITGARLRLRLDGSDNKNDFWRLVYSSDIQPIGNCERNSGMLQPPLGFRLNASSWPMFLLKTLSGAEMAPGRIFHKEPPSPSQNYCKVGMKLEAVDRKNLTLSVPPPSEDARGLRGPGHVRRLEGGVRLLVSLRFWRYLPRRVVFDDWRQPAAARSQSRYSQSRGTQARDLAATASPGARRRPVNCS
SIO_010081: LOC116988206
subclass of: SO_0000673
so part of: LOC116988206
location: join(1969036..1969060,1970505..1970582,1985766..1985836,1988010..1988244,1991592..1991680,1993226..1993470,1997940..1998030)
location: region:1969036-1998030:1
so has part: feature:1969036-1969060:1:exon
so has part: feature:1970505-1970582:1:exon
so has part: feature:1985766-1985836:1:exon
so has part: feature:1988010-1988244:1:exon
so has part: feature:1991592-1991680:1:exon
so has part: feature:1993226-1993470:1:exon
so has part: feature:1997940-1998030:1:exon

XP_032900649.1
type: Protein
SIO_000068: ncbiprotein

position:1969036:1
position: 1969036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1969036-1969060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1970505-1970582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1985766-1985836:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1988010-1988244:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1991592-1991680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1993226-1993470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1997940-1998030:1:exon

slfnl1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: slfnl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2045335..2050054
location: region:2045335-2050054:1
so has part: feature:2045335-2050054:1:exon
subclass of: SO_0000010

116988207
type: Gene
SIO_000068: ncbigene

position:2045335:1
position: 2045335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2050054:1
position: 2050054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2045335-2050054:1:exon

slfnl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: slfnl1
product: schlafen like 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033044759.1
SIO_010081: slfnl1
subclass of: SO_0000673
so part of: slfnl1
location: join(2045335..2045670,2047955..2048633,2049500..2050054)
location: region:2045335-2050054:1
so has part: feature:2045335-2045670:1:exon
so has part: feature:2047955-2048633:1:exon
so has part: feature:2049500-2050054:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2045335-2045670:1:exon

position:2045670:1
position: 2045670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2047955-2048633:1:exon

position:2047955:1
position: 2047955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2048633:1
position: 2048633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2049500-2050054:1:exon

position:2049500:1
position: 2049500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

slfnl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: slfnl1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: schlafen-like protein 1
translation: MEDEAVKVPCLSLFVGNLNPDYSKELLSYKLKDLLATIDVTLQRHDIEVFKKHKRAHAFIRLKTDSEVLNVLEQLLDPGILEQSDMKALVIKGKTLKVAKDIRDFAETSPEKSSSSDPLKEESQGQPHKEKRRLDPIQETSGWSGGKCGQKGLTVVEYLTTPLSGTKSDSAIIGGEIVGQHRLFYGALMGSETRNVEFKRGGGEYLNMTLKGHVRKYVCAFLNSEGGSLFVGVNDDGTVCGVECNHKDEDRVRLLIDSILKGFKPPLFPNSYSISFLPVIKDGDTGLFLKVVRLTVRTPGKDGEILLYETDQGEVYIRRDGSVQGPLSGSSIQEWCRQKWTAEIKKLQDTIDTLVKEEHHLQQELRQQQQSIQELQHLQHELQSVHSERAAMSNLCCVI
SIO_010081: slfnl1
subclass of: SO_0000673
so part of: slfnl1
location: join(2045335..2045670,2047955..2048633,2049500..2049685)
location: region:2045335-2049685:1
so has part: feature:2045335-2045670:1:exon
so has part: feature:2047955-2048633:1:exon
so has part: feature:2049500-2049685:1:exon

XP_032900650.1
type: Protein
SIO_000068: ncbiprotein

position:2049685:1
position: 2049685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2045335-2045670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2047955-2048633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2049500-2049685:1:exon

ctps1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ctps1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2050879..2086532)
location: region:2050879-2086532:-1
so has part: feature:2050879-2086532:-1:exon
subclass of: SO_0000010

116988296
type: Gene
SIO_000068: ncbigene

position:2050879:-1
position: 2050879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2086532:-1
position: 2086532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2050879-2086532:-1:exon

ctps1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ctps1
product: CTP synthase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033044873.1
SIO_010081: ctps1
subclass of: SO_0000673
so part of: ctps1
location: complement(join(2050879..2051655,2053127..2053220,2056104..2056248,2058223..2058319,2059675..2059730,2060624..2060720,2061938..2061981,2063273..2063335,2065031..2065125,2066456..2066544,2066959..2067091,2068628..2068779,2069790..2069870,2071012..2071095,2073293..2073319,2075161..2075277,2075937..2076037,2077348..2077518,2079398..2079577,2086299..2086532))
location: region:2050879-2086532:-1
so has part: feature:2086299-2086532:-1:exon
so has part: feature:2079398-2079577:-1:exon
so has part: feature:2077348-2077518:-1:exon
so has part: feature:2075937-2076037:-1:exon
so has part: feature:2075161-2075277:-1:exon
so has part: feature:2073293-2073319:-1:exon
so has part: feature:2071012-2071095:-1:exon
so has part: feature:2069790-2069870:-1:exon
so has part: feature:2068628-2068779:-1:exon
so has part: feature:2066959-2067091:-1:exon
so has part: feature:2066456-2066544:-1:exon
so has part: feature:2065031-2065125:-1:exon
so has part: feature:2063273-2063335:-1:exon
so has part: feature:2061938-2061981:-1:exon
so has part: feature:2060624-2060720:-1:exon
so has part: feature:2059675-2059730:-1:exon
so has part: feature:2058223-2058319:-1:exon
so has part: feature:2056104-2056248:-1:exon
so has part: feature:2053127-2053220:-1:exon
so has part: feature:2050879-2051655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2086299-2086532:-1:exon

position:2086299:-1
position: 2086299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2079398-2079577:-1:exon

position:2079398:-1
position: 2079398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2079577:-1
position: 2079577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2077348-2077518:-1:exon

position:2077348:-1
position: 2077348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2077518:-1
position: 2077518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2075937-2076037:-1:exon

position:2075937:-1
position: 2075937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2076037:-1
position: 2076037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2075161-2075277:-1:exon

position:2075161:-1
position: 2075161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2075277:-1
position: 2075277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2073293-2073319:-1:exon

position:2073293:-1
position: 2073293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2073319:-1
position: 2073319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2071012-2071095:-1:exon

position:2071012:-1
position: 2071012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2071095:-1
position: 2071095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2069790-2069870:-1:exon

position:2069790:-1
position: 2069790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2069870:-1
position: 2069870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2068628-2068779:-1:exon

position:2068628:-1
position: 2068628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2068779:-1
position: 2068779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2066959-2067091:-1:exon

position:2066959:-1
position: 2066959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2067091:-1
position: 2067091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2066456-2066544:-1:exon

position:2066456:-1
position: 2066456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2066544:-1
position: 2066544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2065031-2065125:-1:exon

position:2065031:-1
position: 2065031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2065125:-1
position: 2065125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2063273-2063335:-1:exon

position:2063273:-1
position: 2063273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2063335:-1
position: 2063335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2061938-2061981:-1:exon

position:2061938:-1
position: 2061938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2061981:-1
position: 2061981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2060624-2060720:-1:exon

position:2060624:-1
position: 2060624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2060720:-1
position: 2060720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2059675-2059730:-1:exon

position:2059675:-1
position: 2059675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2059730:-1
position: 2059730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2058223-2058319:-1:exon

position:2058223:-1
position: 2058223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2058319:-1
position: 2058319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2056104-2056248:-1:exon

position:2056104:-1
position: 2056104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2056248:-1
position: 2056248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2053127-2053220:-1:exon

position:2053127:-1
position: 2053127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2053220:-1
position: 2053220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2050879-2051655:-1:exon

position:2051655:-1
position: 2051655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ctps1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ctps1
product: CTP synthase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033044874.1
SIO_010081: ctps1
subclass of: SO_0000673
so part of: ctps1
location: complement(join(2050879..2051655,2053127..2053220,2056104..2056248,2058223..2058319,2059675..2059730,2060624..2060720,2061938..2061981,2063273..2063335,2065031..2065125,2066456..2066544,2066959..2067091,2068628..2068779,2069790..2069870,2071012..2071095,2075161..2075277,2075937..2076037,2077348..2077518,2079398..2079577,2086299..2086513))
location: region:2050879-2086513:-1
so has part: feature:2086299-2086513:-1:exon
so has part: feature:2079398-2079577:-1:exon
so has part: feature:2077348-2077518:-1:exon
so has part: feature:2075937-2076037:-1:exon
so has part: feature:2075161-2075277:-1:exon
so has part: feature:2071012-2071095:-1:exon
so has part: feature:2069790-2069870:-1:exon
so has part: feature:2068628-2068779:-1:exon
so has part: feature:2066959-2067091:-1:exon
so has part: feature:2066456-2066544:-1:exon
so has part: feature:2065031-2065125:-1:exon
so has part: feature:2063273-2063335:-1:exon
so has part: feature:2061938-2061981:-1:exon
so has part: feature:2060624-2060720:-1:exon
so has part: feature:2059675-2059730:-1:exon
so has part: feature:2058223-2058319:-1:exon
so has part: feature:2056104-2056248:-1:exon
so has part: feature:2053127-2053220:-1:exon
so has part: feature:2050879-2051655:-1:exon

position:2086513:-1
position: 2086513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2086299-2086513:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2079398-2079577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2077348-2077518:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2075937-2076037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2075161-2075277:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2071012-2071095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2069790-2069870:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2068628-2068779:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2066959-2067091:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2066456-2066544:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2065031-2065125:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2063273-2063335:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2061938-2061981:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2060624-2060720:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2059675-2059730:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2058223-2058319:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2056104-2056248:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2053127-2053220:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2050879-2051655:-1:exon

ctps1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ctps1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTP synthase 1 isoform X2
translation: MRRSLPLLQLLSSPALGTIAPACCSTRPLCTTTRALCTSAPARCITAPARSLRSGSRGPMKYILVTGGVISGIGKGIIASSIGTILKSCGLRVTAIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDIRLTRDNNITTGKIYQWVINKERKGDYLGKTVQVVPHITDAIQEWVLRQARIPVDSDGVEPEVCVIELGGTVGDIESMPFIEAFRQFQFKVKRENFCNIHVSLVPLPSTTGEQKTKPTQNSVRELRGLGLSPDLIVCRCTTPMEKAVKEKISMFCHVEPEQVICVYDVCSLYRVPLLLEAEGVVGYFKGRLNLNYEAKPRKLLSKWREMADRYDRTLEICSIALVGKYTKLSDSYASVIKALEHSALAIHQKLEVKYIDSADLELARQEEDPVKYHEAWQNLCSANGVLVPGGFGVRGTEGKILAIAWARKQKKPFLGVCLGMQLAVVEFARNELNWSDANSTEFDANTSYPVVIDMPEHNPGDMGGTMRLGKRTTILKDKNSVLWKLYKESDSIEERHRHRYEVNPEMKKSFEERGLRFVGQDVEGERMEIVELDDHPYFVGVQYHPEFTSRPMKPSPPYFGLALAAAGRLQCYLEKGCRLSPRDTYSDHSGSSSPDSEIVDMKLPTNLTHV
SIO_010081: ctps1
subclass of: SO_0000673
so part of: ctps1
location: complement(join(2053133..2053220,2056104..2056248,2058223..2058319,2059675..2059730,2060624..2060720,2061938..2061981,2063273..2063335,2065031..2065125,2066456..2066544,2066959..2067091,2068628..2068779,2069790..2069870,2071012..2071095,2075161..2075277,2075937..2076037,2077348..2077518,2079398..2079577,2086299..2086461))
location: region:2053133-2086461:-1
so has part: feature:2086299-2086461:-1:exon
so has part: feature:2079398-2079577:-1:exon
so has part: feature:2077348-2077518:-1:exon
so has part: feature:2075937-2076037:-1:exon
so has part: feature:2075161-2075277:-1:exon
so has part: feature:2071012-2071095:-1:exon
so has part: feature:2069790-2069870:-1:exon
so has part: feature:2068628-2068779:-1:exon
so has part: feature:2066959-2067091:-1:exon
so has part: feature:2066456-2066544:-1:exon
so has part: feature:2065031-2065125:-1:exon
so has part: feature:2063273-2063335:-1:exon
so has part: feature:2061938-2061981:-1:exon
so has part: feature:2060624-2060720:-1:exon
so has part: feature:2059675-2059730:-1:exon
so has part: feature:2058223-2058319:-1:exon
so has part: feature:2056104-2056248:-1:exon
so has part: feature:2053133-2053220:-1:exon

XP_032900765.1
type: Protein
SIO_000068: ncbiprotein

position:2053133:-1
position: 2053133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2086461:-1
position: 2086461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2086299-2086461:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2079398-2079577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2077348-2077518:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2075937-2076037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2075161-2075277:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2071012-2071095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2069790-2069870:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2068628-2068779:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2066959-2067091:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2066456-2066544:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2065031-2065125:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2063273-2063335:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2061938-2061981:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2060624-2060720:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2059675-2059730:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2058223-2058319:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2056104-2056248:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2053133-2053220:-1:exon

ctps1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ctps1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTP synthase 1 isoform X1
translation: MRRSLPLLQLLSSPALGTIAPACCSTRPLCTTTRALCTSAPARCITAPARSLRSGSRGPMKYILVTGGVISGIGKGIIASSIGTILKSCGLRVTAIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDIRLTRDNNITTGKIYQWVINKERKGDYLGKTVQVVPHITDAIQEWVLRQARIPVDSDGVEPEVCVIELGGTVGDIESMPFIEAFRQFQFKVKRENFCNIHVSLVPLVPGSASLKQPSTTGEQKTKPTQNSVRELRGLGLSPDLIVCRCTTPMEKAVKEKISMFCHVEPEQVICVYDVCSLYRVPLLLEAEGVVGYFKGRLNLNYEAKPRKLLSKWREMADRYDRTLEICSIALVGKYTKLSDSYASVIKALEHSALAIHQKLEVKYIDSADLELARQEEDPVKYHEAWQNLCSANGVLVPGGFGVRGTEGKILAIAWARKQKKPFLGVCLGMQLAVVEFARNELNWSDANSTEFDANTSYPVVIDMPEHNPGDMGGTMRLGKRTTILKDKNSVLWKLYKESDSIEERHRHRYEVNPEMKKSFEERGLRFVGQDVEGERMEIVELDDHPYFVGVQYHPEFTSRPMKPSPPYFGLALAAAGRLQCYLEKGCRLSPRDTYSDHSGSSSPDSEIVDMKLPTNLTHV
SIO_010081: ctps1
subclass of: SO_0000673
so part of: ctps1
location: complement(join(2053133..2053220,2056104..2056248,2058223..2058319,2059675..2059730,2060624..2060720,2061938..2061981,2063273..2063335,2065031..2065125,2066456..2066544,2066959..2067091,2068628..2068779,2069790..2069870,2071012..2071095,2073293..2073319,2075161..2075277,2075937..2076037,2077348..2077518,2079398..2079577,2086299..2086461))
location: region:2053133-2086461:-1
so has part: feature:2086299-2086461:-1:exon
so has part: feature:2079398-2079577:-1:exon
so has part: feature:2077348-2077518:-1:exon
so has part: feature:2075937-2076037:-1:exon
so has part: feature:2075161-2075277:-1:exon
so has part: feature:2073293-2073319:-1:exon
so has part: feature:2071012-2071095:-1:exon
so has part: feature:2069790-2069870:-1:exon
so has part: feature:2068628-2068779:-1:exon
so has part: feature:2066959-2067091:-1:exon
so has part: feature:2066456-2066544:-1:exon
so has part: feature:2065031-2065125:-1:exon
so has part: feature:2063273-2063335:-1:exon
so has part: feature:2061938-2061981:-1:exon
so has part: feature:2060624-2060720:-1:exon
so has part: feature:2059675-2059730:-1:exon
so has part: feature:2058223-2058319:-1:exon
so has part: feature:2056104-2056248:-1:exon
so has part: feature:2053133-2053220:-1:exon

XP_032900764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2086299-2086461:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2079398-2079577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2077348-2077518:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2075937-2076037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2075161-2075277:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2073293-2073319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2071012-2071095:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2069790-2069870:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2068628-2068779:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2066959-2067091:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2066456-2066544:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2065031-2065125:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2063273-2063335:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2061938-2061981:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2060624-2060720:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2059675-2059730:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2058223-2058319:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2056104-2056248:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2053133-2053220:-1:exon

LOC116988297
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988297
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2465737..2468094
location: region:2465737-2468094:1
so has part: feature:2465737-2468094:1:exon
subclass of: SO_0000010

116988297
type: Gene
SIO_000068: ncbigene

position:2465737:1
position: 2465737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2468094:1
position: 2468094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2465737-2468094:1:exon

LOC116988297
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988297
product: cbp/p300-interacting transactivator 3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033044877.1
SIO_010081: LOC116988297
subclass of: SO_0000673
so part of: LOC116988297
location: join(2465737..2465885,2466297..2466993,2467042..2468094)
location: region:2465737-2468094:1
so has part: feature:2465737-2465885:1:exon
so has part: feature:2466297-2466993:1:exon
so has part: feature:2467042-2468094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2465737-2465885:1:exon

position:2465885:1
position: 2465885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2466297-2466993:1:exon

position:2466297:1
position: 2466297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2466993:1
position: 2466993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2467042-2468094:1:exon

position:2467042:1
position: 2467042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988297
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988297
product: cbp/p300-interacting transactivator 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_033044875.1
SIO_010081: LOC116988297
subclass of: SO_0000673
so part of: LOC116988297
location: join(2465737..2465885,2466297..2467959)
location: region:2465737-2467959:1
so has part: feature:2465737-2465885:1:exon
so has part: feature:2466297-2467959:1:exon

position:2467959:1
position: 2467959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2465737-2465885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2466297-2467959:1:exon

LOC116988297
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988297
product: cbp/p300-interacting transactivator 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033044876.1
SIO_010081: LOC116988297
subclass of: SO_0000673
so part of: LOC116988297
location: join(2465737..2465885,2466297..2466967,2467104..2467959)
location: region:2465737-2467959:1
so has part: feature:2465737-2465885:1:exon
so has part: feature:2466297-2466967:1:exon
so has part: feature:2467104-2467959:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2465737-2465885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2466297-2466967:1:exon

position:2466967:1
position: 2466967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2467104-2467959:1:exon

position:2467104:1
position: 2467104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988297
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988297
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cbp/p300-interacting transactivator 3-like
translation: MAEHIMMSVNPGRFSDGSNGLQSYRMGLNGLQGPQLAQPGLRRDHTGSQLLHYGGASMDSSAVVRSRPGLANMAGQMGHHHQIPANVMYSSQQQQQQQQFLDSLSPQQLMATVHLQKLNNQYHGHPLMAMNNGLAQAGPQYRGSLPPSQHPSLPHVASPALSLNVMDTDLIDEDVLTSLVLELGLDHIQELPELWLGQNEFDFISDFVNKQHQSTVSC
SIO_010081: LOC116988297
subclass of: SO_0000673
so part of: LOC116988297
location: 2466306..2466962
location: region:2466306-2466962:1
so has part: feature:2466306-2466962:1:exon

XP_032900766.1
type: Protein
SIO_000068: ncbiprotein

position:2466306:1
position: 2466306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2466962:1
position: 2466962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2466306-2466962:1:exon

LOC116988297
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988297
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cbp/p300-interacting transactivator 3-like
translation: MAEHIMMSVNPGRFSDGSNGLQSYRMGLNGLQGPQLAQPGLRRDHTGSQLLHYGGASMDSSAVVRSRPGLANMAGQMGHHHQIPANVMYSSQQQQQQQQFLDSLSPQQLMATVHLQKLNNQYHGHPLMAMNNGLAQAGPQYRGSLPPSQHPSLPHVASPALSLNVMDTDLIDEDVLTSLVLELGLDHIQELPELWLGQNEFDFISDFVNKQHQSTVSC
SIO_010081: LOC116988297
subclass of: SO_0000673
so part of: LOC116988297
location: 2466306..2466962
location: region:2466306-2466962:1
so has part: feature:2466306-2466962:1:exon

XP_032900767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2466306-2466962:1:exon

LOC116988297
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988297
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cbp/p300-interacting transactivator 3-like
translation: MAEHIMMSVNPGRFSDGSNGLQSYRMGLNGLQGPQLAQPGLRRDHTGSQLLHYGGASMDSSAVVRSRPGLANMAGQMGHHHQIPANVMYSSQQQQQQQQFLDSLSPQQLMATVHLQKLNNQYHGHPLMAMNNGLAQAGPQYRGSLPPSQHPSLPHVASPALSLNVMDTDLIDEDVLTSLVLELGLDHIQELPELWLGQNEFDFISDFVNKQHQSTVSC
SIO_010081: LOC116988297
subclass of: SO_0000673
so part of: LOC116988297
location: 2466306..2466962
location: region:2466306-2466962:1
so has part: feature:2466306-2466962:1:exon

XP_032900768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2466306-2466962:1:exon

LOC116988299
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988299
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2484982..2489807)
location: region:2484982-2489807:-1
so has part: feature:2484982-2489807:-1:exon
subclass of: SO_0000011

116988299
type: Gene
SIO_000068: ncbigene

position:2484982:-1
position: 2484982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2489807:-1
position: 2489807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2484982-2489807:-1:exon

LOC116988299
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988299
product: uncharacterized LOC116988299
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004415908.1
SIO_010081: LOC116988299
subclass of: SO_0000673
so part of: LOC116988299
location: complement(join(2484982..2484996,2485202..2485502,2486212..2486379,2488242..2488301,2488842..2488934,2489749..2489807))
location: region:2484982-2489807:-1
so has part: feature:2489749-2489807:-1:exon
so has part: feature:2488842-2488934:-1:exon
so has part: feature:2488242-2488301:-1:exon
so has part: feature:2486212-2486379:-1:exon
so has part: feature:2485202-2485502:-1:exon
so has part: feature:2484982-2484996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2489749-2489807:-1:exon

position:2489749:-1
position: 2489749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2488842-2488934:-1:exon

position:2488842:-1
position: 2488842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2488934:-1
position: 2488934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2488242-2488301:-1:exon

position:2488242:-1
position: 2488242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2488301:-1
position: 2488301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2486212-2486379:-1:exon

position:2486212:-1
position: 2486212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2486379:-1
position: 2486379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2485202-2485502:-1:exon

position:2485202:-1
position: 2485202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2485502:-1
position: 2485502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2484982-2484996:-1:exon

position:2484996:-1
position: 2484996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988683
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988683
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2486047..2486118)
location: region:2486047-2486118:-1
so has part: feature:2486047-2486118:-1:exon
subclass of: SO_0000578

116988683
type: Gene
SIO_000068: ncbigene

position:2486047:-1
position: 2486047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2486118:-1
position: 2486118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2486047-2486118:-1:exon

LOC116988683
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snoRNA
gene: LOC116988683
product: small nucleolar RNA SNORD99
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00608
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004416034.1
SIO_010081: LOC116988683
subclass of: SO_0000673
so part of: LOC116988683
location: complement(2486047..2486118)
location: region:2486047-2486118:-1
so has part: feature:2486047-2486118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2486047-2486118:-1:exon

LOC116988680
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988680
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2488066..2488197)
location: region:2488066-2488197:-1
so has part: feature:2488066-2488197:-1:exon
subclass of: SO_0000578

116988680
type: Gene
SIO_000068: ncbigene

position:2488066:-1
position: 2488066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2488197:-1
position: 2488197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2488066-2488197:-1:exon

LOC116988680
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snoRNA
gene: LOC116988680
product: small nucleolar RNA SNORA44
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00405
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004416031.1
SIO_010081: LOC116988680
subclass of: SO_0000673
so part of: LOC116988680
location: complement(2488066..2488197)
location: region:2488066-2488197:-1
so has part: feature:2488066-2488197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2488066-2488197:-1:exon

LOC116988679
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988679
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2489378..2489523)
location: region:2489378-2489523:-1
so has part: feature:2489378-2489523:-1:exon
subclass of: SO_0000578

116988679
type: Gene
SIO_000068: ncbigene

position:2489378:-1
position: 2489378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2489523:-1
position: 2489523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2489378-2489523:-1:exon

LOC116988679
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snoRNA
gene: LOC116988679
product: small nucleolar RNA SNORA16B/SNORA16A family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00190
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004416030.1
SIO_010081: LOC116988679
subclass of: SO_0000673
so part of: LOC116988679
location: complement(2489378..2489523)
location: region:2489378-2489523:-1
so has part: feature:2489378-2489523:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2489378-2489523:-1:exon

LOC116988298
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988298
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2490079..2507296
location: region:2490079-2507296:1
so has part: feature:2490079-2507296:1:exon
subclass of: SO_0000010

116988298
type: Gene
SIO_000068: ncbigene

position:2490079:1
position: 2490079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2507296:1
position: 2507296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2490079-2507296:1:exon

LOC116988298
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988298
product: synapse-associated protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033044878.1
SIO_010081: LOC116988298
subclass of: SO_0000673
so part of: LOC116988298
location: join(2490079..2490322,2492911..2493029,2495795..2495861,2496833..2496906,2498962..2499101,2499466..2499611,2503670..2503728,2504741..2504891,2507059..2507296)
location: region:2490079-2507296:1
so has part: feature:2490079-2490322:1:exon
so has part: feature:2492911-2493029:1:exon
so has part: feature:2495795-2495861:1:exon
so has part: feature:2496833-2496906:1:exon
so has part: feature:2498962-2499101:1:exon
so has part: feature:2499466-2499611:1:exon
so has part: feature:2503670-2503728:1:exon
so has part: feature:2504741-2504891:1:exon
so has part: feature:2507059-2507296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2490079-2490322:1:exon

position:2490322:1
position: 2490322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2492911-2493029:1:exon

position:2492911:1
position: 2492911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2493029:1
position: 2493029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2495795-2495861:1:exon

position:2495795:1
position: 2495795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2495861:1
position: 2495861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2496833-2496906:1:exon

position:2496833:1
position: 2496833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2496906:1
position: 2496906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2498962-2499101:1:exon

position:2498962:1
position: 2498962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2499101:1
position: 2499101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2499466-2499611:1:exon

position:2499466:1
position: 2499466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2499611:1
position: 2499611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2503670-2503728:1:exon

position:2503670:1
position: 2503670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2503728:1
position: 2503728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2504741-2504891:1:exon

position:2504741:1
position: 2504741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2504891:1
position: 2504891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2507059-2507296:1:exon

position:2507059:1
position: 2507059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988298
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988298
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synapse-associated protein 1-like
translation: MFRALAAGGWLAWPGDAGYSARQEEAELLHPPREDGEEPWAGEEAPPPGLEPEAGPGAGAGPEQARGVGSYLRNVATSASKKVSDSMRETAQTIKKTVEEHKIGNLLDMTIIGNFNKEQEKFMDEQKSKKSESALPPWAGYNNEESVKQQVLSLSEDRRNFLRDPPAGVRFSFDFNTVAPVAVVMLREDKLLSKMRFELVPKLVKEEQFWKNYFYRISLIKQSVQLLSQAAGQPENSRDEPDASENSLPATDSVLSSPSTVPVRKQNESAGAPSGQEVSISPTANEFVSDAFDTSFLNQEDILRGMEQLGMSSDQPAPGDEADDIPEWEKELQRELQEFEIVEGKAKVSDAWEKEIEALLQEED
SIO_010081: LOC116988298
subclass of: SO_0000673
so part of: LOC116988298
location: join(2490115..2490322,2492911..2493029,2495795..2495861,2496833..2496906,2498962..2499101,2499466..2499611,2503670..2503728,2504741..2504891,2507059..2507189)
location: region:2490115-2507189:1
so has part: feature:2490115-2490322:1:exon
so has part: feature:2492911-2493029:1:exon
so has part: feature:2495795-2495861:1:exon
so has part: feature:2496833-2496906:1:exon
so has part: feature:2498962-2499101:1:exon
so has part: feature:2499466-2499611:1:exon
so has part: feature:2503670-2503728:1:exon
so has part: feature:2504741-2504891:1:exon
so has part: feature:2507059-2507189:1:exon

XP_032900769.1
type: Protein
SIO_000068: ncbiprotein

position:2490115:1
position: 2490115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2507189:1
position: 2507189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2490115-2490322:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2492911-2493029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2495795-2495861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2496833-2496906:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2498962-2499101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2499466-2499611:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2503670-2503728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2504741-2504891:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2507059-2507189:1:exon

rab42
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rab42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2514171..2519297
location: region:2514171-2519297:1
so has part: feature:2514171-2519297:1:exon
subclass of: SO_0000010

116988300
type: Gene
SIO_000068: ncbigene

position:2514171:1
position: 2514171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2519297:1
position: 2519297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2514171-2519297:1:exon

rab42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rab42
product: RAB42, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033044880.1
SIO_010081: rab42
subclass of: SO_0000673
so part of: rab42
location: join(2514171..2514562,2518675..2519297)
location: region:2514171-2519297:1
so has part: feature:2514171-2514562:1:exon
so has part: feature:2518675-2519297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2514171-2514562:1:exon

position:2514562:1
position: 2514562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2518675-2519297:1:exon

position:2518675:1
position: 2518675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rab42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rab42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-42
translation: MDEVWQYQFRIILLGDSTVGKSSLLKRFTGGTFSAVQDPTVGVDFYARLLEVEPGCRIKLQLWDTAGQERFRSITRSYFRNSVGGLLLFDVTNRHSFENVREWLKEVDAHVFPNKTIFVLVGHKSDLVEERQVPRDEAEALAAALGLNYLETSAKDNSNVEEAFTKLTACIYQSMKDGEIALEDGWDGVKRGFNPTAMDRAKDEKHSDCSC
SIO_010081: rab42
subclass of: SO_0000673
so part of: rab42
location: join(2514348..2514562,2518675..2519095)
location: region:2514348-2519095:1
so has part: feature:2514348-2514562:1:exon
so has part: feature:2518675-2519095:1:exon

XP_032900771.1
type: Protein
SIO_000068: ncbiprotein

position:2514348:1
position: 2514348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2519095:1
position: 2519095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2514348-2514562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2518675-2519095:1:exon

LOC116988301
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988301
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2525215..2532756
location: region:2525215-2532756:1
so has part: feature:2525215-2532756:1:exon
subclass of: SO_0000010

116988301
type: Gene
SIO_000068: ncbigene

position:2525215:1
position: 2525215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2532756:1
position: 2532756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2525215-2532756:1:exon

LOC116988301
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988301
product: ras-related protein Rab-39A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033044881.1
SIO_010081: LOC116988301
subclass of: SO_0000673
so part of: LOC116988301
location: join(2525215..2525533,2531912..2532756)
location: region:2525215-2532756:1
so has part: feature:2525215-2525533:1:exon
so has part: feature:2531912-2532756:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2525215-2525533:1:exon

position:2525533:1
position: 2525533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2531912-2532756:1:exon

position:2531912:1
position: 2531912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988301
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988301
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-39A-like
translation: MGQTLPTLGAVSKLGNKRTNLEKVICQFRVILVGESGVGKTAIVHRLTEGVFKEELQKTIGVDYYIHMLETPAIYRVKLQVWDTAGEKELGTITQSHLQIMLGGLLVFDITNRHSLDYIRSWLDECGDVFDQGQCVFLLVGHKCDLSAERTVPKEEAEQVAADLGMGYIETSAKDDTNIQGAFHTLASSIAELVKSEVDAGISETQRLVLLNR
SIO_010081: LOC116988301
subclass of: SO_0000673
so part of: LOC116988301
location: join(2525262..2525533,2531912..2532281)
location: region:2525262-2532281:1
so has part: feature:2525262-2525533:1:exon
so has part: feature:2531912-2532281:1:exon

XP_032900772.1
type: Protein
SIO_000068: ncbiprotein

position:2525262:1
position: 2525262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2532281:1
position: 2532281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2525262-2525533:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2531912-2532281:1:exon

taf12
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: taf12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2538852..2568291)
location: region:2538852-2568291:-1
so has part: feature:2538852-2568291:-1:exon
subclass of: SO_0000010

116988302
type: Gene
SIO_000068: ncbigene

position:2538852:-1
position: 2538852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2568291:-1
position: 2568291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2538852-2568291:-1:exon

taf12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: taf12
product: TATA-box binding protein associated factor 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033044883.1
SIO_010081: taf12
subclass of: SO_0000673
so part of: taf12
location: complement(join(2538852..2539264,2541543..2541631,2545520..2545634,2547975..2548052,2550162..2550413,2568159..2568291))
location: region:2538852-2568291:-1
so has part: feature:2568159-2568291:-1:exon
so has part: feature:2550162-2550413:-1:exon
so has part: feature:2547975-2548052:-1:exon
so has part: feature:2545520-2545634:-1:exon
so has part: feature:2541543-2541631:-1:exon
so has part: feature:2538852-2539264:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2568159-2568291:-1:exon

position:2568159:-1
position: 2568159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2550162-2550413:-1:exon

position:2550162:-1
position: 2550162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2550413:-1
position: 2550413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2547975-2548052:-1:exon

position:2547975:-1
position: 2547975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2548052:-1
position: 2548052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2545520-2545634:-1:exon

position:2545520:-1
position: 2545520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2545634:-1
position: 2545634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2541543-2541631:-1:exon

position:2541543:-1
position: 2541543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2541631:-1
position: 2541631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2538852-2539264:-1:exon

position:2539264:-1
position: 2539264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

taf12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: taf12
product: TATA-box binding protein associated factor 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_033044882.1
SIO_010081: taf12
subclass of: SO_0000673
so part of: taf12
location: complement(join(2538852..2539264,2541543..2541631,2545520..2545634,2547975..2548052,2550162..2550413,2560643..2560724,2568159..2568286))
location: region:2538852-2568286:-1
so has part: feature:2568159-2568286:-1:exon
so has part: feature:2560643-2560724:-1:exon
so has part: feature:2550162-2550413:-1:exon
so has part: feature:2547975-2548052:-1:exon
so has part: feature:2545520-2545634:-1:exon
so has part: feature:2541543-2541631:-1:exon
so has part: feature:2538852-2539264:-1:exon

position:2568286:-1
position: 2568286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2568159-2568286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2560643-2560724:-1:exon

position:2560643:-1
position: 2560643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2560724:-1
position: 2560724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2550162-2550413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2547975-2548052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2545520-2545634:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2541543-2541631:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2538852-2539264:-1:exon

taf12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: taf12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 12 isoform X1
translation: MNSTLSGPTAVADVIKDLDTQIALIGPGPHNPKQKQDLEKLNDLKAKAQQIMNQFGPATLINLTNFPSIKPDPSSTPPPNTMANSAAVVKIPGTPGSGGRMSPEGNQVLSKKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIESVVSAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGFGSDEIRPYKKACTTEAHKQRMALIRKTTKK
SIO_010081: taf12
subclass of: SO_0000673
so part of: taf12
location: complement(join(2539229..2539264,2541543..2541631,2545520..2545634,2547975..2548052,2550162..2550413,2560643..2560711))
location: region:2539229-2560711:-1
so has part: feature:2560643-2560711:-1:exon
so has part: feature:2550162-2550413:-1:exon
so has part: feature:2547975-2548052:-1:exon
so has part: feature:2545520-2545634:-1:exon
so has part: feature:2541543-2541631:-1:exon
so has part: feature:2539229-2539264:-1:exon

XP_032900773.1
type: Protein
SIO_000068: ncbiprotein

position:2539229:-1
position: 2539229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2560711:-1
position: 2560711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2560643-2560711:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2550162-2550413:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2547975-2548052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2545520-2545634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2541543-2541631:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2539229-2539264:-1:exon

taf12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: taf12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 12 isoform X2
translation: MNQFGPATLINLTNFPSIKPDPSSTPPPNTMANSAAVVKIPGTPGSGGRMSPEGNQVLSKKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIESVVSAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGFGSDEIRPYKKACTTEAHKQRMALIRKTTKK
SIO_010081: taf12
subclass of: SO_0000673
so part of: taf12
location: complement(join(2539229..2539264,2541543..2541631,2545520..2545634,2547975..2548052,2550162..2550329))
location: region:2539229-2550329:-1
so has part: feature:2550162-2550329:-1:exon
so has part: feature:2547975-2548052:-1:exon
so has part: feature:2545520-2545634:-1:exon
so has part: feature:2541543-2541631:-1:exon
so has part: feature:2539229-2539264:-1:exon

XP_032900774.1
type: Protein
SIO_000068: ncbiprotein

position:2550329:-1
position: 2550329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2550162-2550329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2547975-2548052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2545520-2545634:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2541543-2541631:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2539229-2539264:-1:exon

LOC116988208
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2572341..2629447)
location: region:2572341-2629447:-1
so has part: feature:2572341-2629447:-1:exon
subclass of: SO_0000010

116988208
type: Gene
SIO_000068: ncbigene

position:2572341:-1
position: 2572341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2629447:-1
position: 2629447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2572341-2629447:-1:exon

LOC116988208
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988208
product: discoidin, CUB and LCCL domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033044761.1
SIO_010081: LOC116988208
subclass of: SO_0000673
so part of: LOC116988208
location: complement(join(2572341..2573226,2574310..2574435,2575236..2575273,2576919..2577009,2579919..2580017,2584316..2584478,2585914..2586038,2587716..2587877,2591432..2591469,2592466..2592599,2594639..2594711,2595947..2596002,2619004..2619332,2629274..2629447))
location: region:2572341-2629447:-1
so has part: feature:2629274-2629447:-1:exon
so has part: feature:2619004-2619332:-1:exon
so has part: feature:2595947-2596002:-1:exon
so has part: feature:2594639-2594711:-1:exon
so has part: feature:2592466-2592599:-1:exon
so has part: feature:2591432-2591469:-1:exon
so has part: feature:2587716-2587877:-1:exon
so has part: feature:2585914-2586038:-1:exon
so has part: feature:2584316-2584478:-1:exon
so has part: feature:2579919-2580017:-1:exon
so has part: feature:2576919-2577009:-1:exon
so has part: feature:2575236-2575273:-1:exon
so has part: feature:2574310-2574435:-1:exon
so has part: feature:2572341-2573226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2629274-2629447:-1:exon

position:2629274:-1
position: 2629274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2619004-2619332:-1:exon

position:2619004:-1
position: 2619004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2619332:-1
position: 2619332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2595947-2596002:-1:exon

position:2595947:-1
position: 2595947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2596002:-1
position: 2596002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2594639-2594711:-1:exon

position:2594639:-1
position: 2594639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2594711:-1
position: 2594711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2592466-2592599:-1:exon

position:2592466:-1
position: 2592466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2592599:-1
position: 2592599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2591432-2591469:-1:exon

position:2591432:-1
position: 2591432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2591469:-1
position: 2591469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2587716-2587877:-1:exon

position:2587716:-1
position: 2587716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2587877:-1
position: 2587877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2585914-2586038:-1:exon

position:2585914:-1
position: 2585914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2586038:-1
position: 2586038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2584316-2584478:-1:exon

position:2584316:-1
position: 2584316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2584478:-1
position: 2584478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2579919-2580017:-1:exon

position:2579919:-1
position: 2579919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2580017:-1
position: 2580017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2576919-2577009:-1:exon

position:2576919:-1
position: 2576919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2577009:-1
position: 2577009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2575236-2575273:-1:exon

position:2575236:-1
position: 2575236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2575273:-1
position: 2575273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2574310-2574435:-1:exon

position:2574310:-1
position: 2574310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2574435:-1
position: 2574435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2572341-2573226:-1:exon

position:2573226:-1
position: 2573226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988208
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: discoidin, CUB and LCCL domain-containing protein 1-like
translation: MSVALNLRRLLALSTALSLPDLVRGQLGDGCGHTVTGPESGTLATMDYPGTYPNHTWCRWQIRVAEGKAVMLMFADLDIEYSENCSSDSVHVTASPANGSYGKGSTIWGQVGGSFSLETRRGNRPFGPPSPRQPAIPADMISCLHKGIHYSQQRFTKYCPAGCKGISGDVWGNHQDGYRDTSVLCKAAVHAGAIADELGGQVSVTLKKGITLYEAASANGISTRRGSLSEKRIKIRKDCSLVLDSRRITASSSWTEKTNTGELSDWSPDKAGTSSNEEWLQIDLGERKNVTGIATRGSTNNGYNFYVKTYKISYSKDRKTWRFYKRKNSREDQVFEGNANSHQLVRNDFIPSFVARYVRLVPQRWHQRIALKAEVMGCRVSTRNRTPDVLRSPRPLPKPTYMPTESTTPPDVVIVEEHLPGFNLIVVLIVVSFLVITSTAVLLLYLFCRKRKSGKRMHSSSQQACDEPVKKQNCQRSQLQPTESEIITYTSEEGSCRSITGNTLSDYAEPDIIQGGIAAQKAASTFKPPMDDGYTVPLVVNHYDVPFSGKNHEYAEPFPNQEPEYATPFVEPSVESETSTKKNVCVVVVIPSVQEAL
SIO_010081: LOC116988208
subclass of: SO_0000673
so part of: LOC116988208
location: complement(join(2572949..2573226,2574310..2574435,2575236..2575273,2576919..2577009,2579919..2580017,2584316..2584478,2585914..2586038,2587716..2587877,2591432..2591469,2592466..2592599,2594639..2594711,2595947..2596002,2619004..2619332,2629274..2629355))
location: region:2572949-2629355:-1
so has part: feature:2629274-2629355:-1:exon
so has part: feature:2619004-2619332:-1:exon
so has part: feature:2595947-2596002:-1:exon
so has part: feature:2594639-2594711:-1:exon
so has part: feature:2592466-2592599:-1:exon
so has part: feature:2591432-2591469:-1:exon
so has part: feature:2587716-2587877:-1:exon
so has part: feature:2585914-2586038:-1:exon
so has part: feature:2584316-2584478:-1:exon
so has part: feature:2579919-2580017:-1:exon
so has part: feature:2576919-2577009:-1:exon
so has part: feature:2575236-2575273:-1:exon
so has part: feature:2574310-2574435:-1:exon
so has part: feature:2572949-2573226:-1:exon

XP_032900652.1
type: Protein
SIO_000068: ncbiprotein

position:2572949:-1
position: 2572949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2629355:-1
position: 2629355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2629274-2629355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2619004-2619332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2595947-2596002:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2594639-2594711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2592466-2592599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2591432-2591469:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2587716-2587877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2585914-2586038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2584316-2584478:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2579919-2580017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2576919-2577009:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2575236-2575273:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2574310-2574435:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2572949-2573226:-1:exon

LOC116988303
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988303
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2646072..2663004)
location: region:2646072-2663004:-1
so has part: feature:2646072-2663004:-1:exon
subclass of: SO_0000010

116988303
type: Gene
SIO_000068: ncbigene

position:2646072:-1
position: 2646072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2663004:-1
position: 2663004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2646072-2663004:-1:exon

LOC116988303
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988303
product: transcription cofactor vestigial-like protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033044885.1
SIO_010081: LOC116988303
subclass of: SO_0000673
so part of: LOC116988303
location: complement(join(2646072..2646636,2650134..2650556,2659953..2660217,2662686..2663004))
location: region:2646072-2663004:-1
so has part: feature:2662686-2663004:-1:exon
so has part: feature:2659953-2660217:-1:exon
so has part: feature:2650134-2650556:-1:exon
so has part: feature:2646072-2646636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2662686-2663004:-1:exon

position:2662686:-1
position: 2662686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2659953-2660217:-1:exon

position:2659953:-1
position: 2659953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2660217:-1
position: 2660217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2650134-2650556:-1:exon

position:2650134:-1
position: 2650134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2650556:-1
position: 2650556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2646072-2646636:-1:exon

position:2646636:-1
position: 2646636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988303
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988303
product: transcription cofactor vestigial-like protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033044884.1
SIO_010081: LOC116988303
subclass of: SO_0000673
so part of: LOC116988303
location: complement(join(2646072..2646636,2650134..2650559,2659953..2660217,2662686..2662998))
location: region:2646072-2662998:-1
so has part: feature:2662686-2662998:-1:exon
so has part: feature:2659953-2660217:-1:exon
so has part: feature:2650134-2650559:-1:exon
so has part: feature:2646072-2646636:-1:exon

position:2662998:-1
position: 2662998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2662686-2662998:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2659953-2660217:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2650134-2650559:-1:exon

position:2650559:-1
position: 2650559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2646072-2646636:-1:exon

LOC116988303
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988303
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 2 isoform X2
translation: MEASTSSSPATSKEEALREQERPEAEYINSKCVLFTYLNGDINALVDQHFSRALSNYNPDARSTRGRKGSTASSGSLNDRSFPASFWDSDYQAPTTTCTASGSCIGSPHTELQLTPTDPYPAALHPHLAQPPDHWHFPLAGHLSPQSPAYHQARTIHELYPVGPNLDPRYSSLLVPALRANRLQPTLSAQEPSSPWSGVFPTAEVTQTLNLNVDAARHYCIPRGSFFS
SIO_010081: LOC116988303
subclass of: SO_0000673
so part of: LOC116988303
location: complement(join(2646596..2646636,2650134..2650556,2659953..2660175))
location: region:2646596-2660175:-1
so has part: feature:2659953-2660175:-1:exon
so has part: feature:2650134-2650556:-1:exon
so has part: feature:2646596-2646636:-1:exon

XP_032900776.1
type: Protein
SIO_000068: ncbiprotein

position:2646596:-1
position: 2646596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2660175:-1
position: 2660175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2659953-2660175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2650134-2650556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2646596-2646636:-1:exon

LOC116988303
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988303
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 2 isoform X1
translation: MEASTSSSPATSKEEALREQERPEAEYINSKCVLFTYLNGDINALVDQHFSRALSNYNPDARSTRGRKGSTASSEGSLNDRSFPASFWDSDYQAPTTTCTASGSCIGSPHTELQLTPTDPYPAALHPHLAQPPDHWHFPLAGHLSPQSPAYHQARTIHELYPVGPNLDPRYSSLLVPALRANRLQPTLSAQEPSSPWSGVFPTAEVTQTLNLNVDAARHYCIPRGSFFS
SIO_010081: LOC116988303
subclass of: SO_0000673
so part of: LOC116988303
location: complement(join(2646596..2646636,2650134..2650559,2659953..2660175))
location: region:2646596-2660175:-1
so has part: feature:2659953-2660175:-1:exon
so has part: feature:2650134-2650559:-1:exon
so has part: feature:2646596-2646636:-1:exon

XP_032900775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2659953-2660175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2650134-2650559:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2646596-2646636:-1:exon

LOC116988304
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3093539..3188779)
location: region:3093539-3188779:-1
so has part: feature:3093539-3188779:-1:exon
subclass of: SO_0000010

116988304
type: Gene
SIO_000068: ncbigene

position:3093539:-1
position: 3093539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3188779:-1
position: 3188779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3093539-3188779:-1:exon

LOC116988304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988304
product: protein quaking-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033044891.1
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3093539..3096614,3097446..3097558,3099175..3099249,3104143..3104421,3109284..3109374,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188720))
location: region:3093539-3188720:-1
so has part: feature:3188356-3188720:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109374:-1:exon
so has part: feature:3104143-3104421:-1:exon
so has part: feature:3099175-3099249:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3093539-3096614:-1:exon

position:3188720:-1
position: 3188720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188720:-1:exon

position:3188356:-1
position: 3188356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

position:3160817:-1
position: 3160817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3160959:-1
position: 3160959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

position:3144917:-1
position: 3144917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3145033:-1
position: 3145033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

position:3136909:-1
position: 3136909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3137052:-1
position: 3137052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109374:-1:exon

position:3109284:-1
position: 3109284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3109374:-1
position: 3109374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104421:-1:exon

position:3104143:-1
position: 3104143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3104421:-1
position: 3104421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3099175-3099249:-1:exon

position:3099175:-1
position: 3099175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3099249:-1
position: 3099249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3097446-3097558:-1:exon

position:3097446:-1
position: 3097446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3097558:-1
position: 3097558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3093539-3096614:-1:exon

position:3096614:-1
position: 3096614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988304
product: protein quaking-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033044893.1
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3093539..3096614,3097446..3097558,3104143..3104445,3109284..3109374,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188720))
location: region:3093539-3188720:-1
so has part: feature:3188356-3188720:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109374:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3093539-3096614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104445:-1:exon

position:3104445:-1
position: 3104445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3097446-3097558:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3093539-3096614:-1:exon

LOC116988304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988304
product: protein quaking-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033044892.1
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3093539..3096614,3097446..3097558,3099175..3099249,3104143..3104421,3109284..3109371,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188719))
location: region:3093539-3188719:-1
so has part: feature:3188356-3188719:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109371:-1:exon
so has part: feature:3104143-3104421:-1:exon
so has part: feature:3099175-3099249:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3093539-3096614:-1:exon

position:3188719:-1
position: 3188719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109371:-1:exon

position:3109371:-1
position: 3109371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104421:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099175-3099249:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3097446-3097558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3093539-3096614:-1:exon

LOC116988304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988304
product: protein quaking-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033044886.1
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3093539..3096614,3097446..3097558,3099175..3099249,3104143..3104445,3109284..3109374,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188719))
location: region:3093539-3188719:-1
so has part: feature:3188356-3188719:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109374:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3099175-3099249:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3093539-3096614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099175-3099249:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3097446-3097558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3093539-3096614:-1:exon

LOC116988304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988304
product: protein quaking-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033044887.1
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3093539..3096614,3097446..3097558,3099175..3099249,3104143..3104445,3109284..3109371,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188718))
location: region:3093539-3188718:-1
so has part: feature:3188356-3188718:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109371:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3099175-3099249:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3093539-3096614:-1:exon

position:3188718:-1
position: 3188718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099175-3099249:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3097446-3097558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3093539-3096614:-1:exon

LOC116988304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988304
product: protein quaking-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033044889.1
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3093539..3096598,3097446..3097558,3099175..3099249,3104143..3104445,3109284..3109374,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188718))
location: region:3093539-3188718:-1
so has part: feature:3188356-3188718:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109374:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3099175-3099249:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3093539-3096598:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099175-3099249:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3097446-3097558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3093539-3096598:-1:exon

position:3096598:-1
position: 3096598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988304
product: protein quaking-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033044894.1
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3093539..3096614,3097446..3097558,3099175..3099249,3104143..3104445,3109284..3109374,3136909..3137052,3144917..3145033,3160817..3160959,3173089..3173199))
location: region:3093539-3173199:-1
so has part: feature:3173089-3173199:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109374:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3099175-3099249:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3093539-3096614:-1:exon

position:3173199:-1
position: 3173199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3173089-3173199:-1:exon

position:3173089:-1
position: 3173089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099175-3099249:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3097446-3097558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3093539-3096614:-1:exon

LOC116988304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988304
product: protein quaking-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 32 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033044890.1
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3094727..3096598,3097446..3097558,3099175..3099249,3104143..3104445,3109284..3109371,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188779))
location: region:3094727-3188779:-1
so has part: feature:3188356-3188779:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109371:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3099175-3099249:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3094727-3096598:-1:exon

position:3094727:-1
position: 3094727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099175-3099249:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3097446-3097558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3094727-3096598:-1:exon

LOC116988304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein quaking-like isoform X4
translation: MMVGEMEAKEKPRPSPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYTDTMNGLVDKLPMDLPDPIGPIMQLQEKLFVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQDRAELKLRRAVEEVKKLLVPAAEGEDNLKKMQLMELAILNGTYRDANIKAPTLAFSLAATAQGPRLITGPGAPMLPPAALRASTQAGPAIMNIIRPIQTTAVMPNGTPHPGALVPPSPEAGIIYTTPYDYPYALTPAGSLLEYPMEPSGVLGAMATKVRRHDSRVHPYQRIVTADRDLQGWMNPLVLGPGPYKNLAGPQFKLYETKGSPSQQYSLPQATNP
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3096575..3096598,3097446..3097558,3099175..3099249,3104143..3104445,3109284..3109371,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188500))
location: region:3096575-3188500:-1
so has part: feature:3188356-3188500:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109371:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3099175-3099249:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3096575-3096598:-1:exon

XP_032900781.1
type: Protein
SIO_000068: ncbiprotein

position:3096575:-1
position: 3096575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3188500:-1
position: 3188500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099175-3099249:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3097446-3097558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3096575-3096598:-1:exon

LOC116988304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein quaking-like isoform X3
translation: MMVGEMEAKEKPRPSPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYTDTMNGLVDKLPMDLPDPIGPIMQLQEKLFVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQDRAELKLRRAVEEVKKLLVPAQAEGEDNLKKMQLMELAILNGTYRDANIKAPTLAFSLAATAQGPRLITGPGAPMLPPAALRASTQAGPAIMNIIRPIQTTAVMPNGTPHPGALVPPSPEAGIIYTTPYDYPYALTPAGSLLEYPMEPSGVLGAMATKVRRHDSRVHPYQRIVTADRDLQGWMNPLVLGPGPYKNLAGPQFKLYETKGSPSQQYSLPQATNP
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3096575..3096598,3097446..3097558,3099175..3099249,3104143..3104445,3109284..3109374,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188500))
location: region:3096575-3188500:-1
so has part: feature:3188356-3188500:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109374:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3099175-3099249:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3096575-3096598:-1:exon

XP_032900780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099175-3099249:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3097446-3097558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3096575-3096598:-1:exon

LOC116988304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein quaking-like isoform X6
translation: MMVGEMEAKEKPRPSPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYTDTMNGLVDKLPMDLPDPIGPIMQLQEKLFVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQDRAELKLRRAVEEVKKLLVPAAEGEDNLKKMQLMELAILNGTYRDANIKAPTAQGPRLITGPGAPMLPPAALRASTQAGPAIMNIIRPIQTTAVMPNGTPHPGALVPPSPEAGIIYTTPYDYPYALTPAGSLLEYPMEPSGVLGAMATKVRRHDSRVHPYQRIVTADRDLQGWMNPLVLGPGPYKNLAGPQFKLYETKGSPSQQYSVPNYPAATSN
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3096582..3096614,3097446..3097558,3099175..3099249,3104143..3104421,3109284..3109371,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188500))
location: region:3096582-3188500:-1
so has part: feature:3188356-3188500:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109371:-1:exon
so has part: feature:3104143-3104421:-1:exon
so has part: feature:3099175-3099249:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3096582-3096614:-1:exon

XP_032900783.1
type: Protein
SIO_000068: ncbiprotein

position:3096582:-1
position: 3096582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104421:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099175-3099249:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3097446-3097558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3096582-3096614:-1:exon

LOC116988304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein quaking-like isoform X2
translation: MMVGEMEAKEKPRPSPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYTDTMNGLVDKLPMDLPDPIGPIMQLQEKLFVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQDRAELKLRRAVEEVKKLLVPAAEGEDNLKKMQLMELAILNGTYRDANIKAPTLAFSLAATAQGPRLITGPGAPMLPPAALRASTQAGPAIMNIIRPIQTTAVMPNGTPHPGALVPPSPEAGIIYTTPYDYPYALTPAGSLLEYPMEPSGVLGAMATKVRRHDSRVHPYQRIVTADRDLQGWMNPLVLGPGPYKNLAGPQFKLYETKGSPSQQYSVPNYPAATSN
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3096582..3096614,3097446..3097558,3099175..3099249,3104143..3104445,3109284..3109371,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188500))
location: region:3096582-3188500:-1
so has part: feature:3188356-3188500:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109371:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3099175-3099249:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3096582-3096614:-1:exon

XP_032900778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099175-3099249:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3097446-3097558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3096582-3096614:-1:exon

LOC116988304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein quaking-like isoform X5
translation: MMVGEMEAKEKPRPSPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYTDTMNGLVDKLPMDLPDPIGPIMQLQEKLFVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQDRAELKLRRAVEEVKKLLVPAQAEGEDNLKKMQLMELAILNGTYRDANIKAPTAQGPRLITGPGAPMLPPAALRASTQAGPAIMNIIRPIQTTAVMPNGTPHPGALVPPSPEAGIIYTTPYDYPYALTPAGSLLEYPMEPSGVLGAMATKVRRHDSRVHPYQRIVTADRDLQGWMNPLVLGPGPYKNLAGPQFKLYETKGSPSQQYSVPNYPAATSN
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3096582..3096614,3097446..3097558,3099175..3099249,3104143..3104421,3109284..3109374,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188500))
location: region:3096582-3188500:-1
so has part: feature:3188356-3188500:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109374:-1:exon
so has part: feature:3104143-3104421:-1:exon
so has part: feature:3099175-3099249:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3096582-3096614:-1:exon

XP_032900782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104421:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099175-3099249:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3097446-3097558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3096582-3096614:-1:exon

LOC116988304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein quaking-B-like isoform X7
translation: MMVGEMEAKEKPRPSPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYTDTMNGLVDKLPMDLPDPIGPIMQLQEKLFVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQDRAELKLRRAVEEVKKLLVPAQAEGEDNLKKMQLMELAILNGTYRDANIKAPTLAFSLAATAQGPRLITGPGAPMLPPAALRASTQAGPAIMNIIRPIQTTAVMPNGTPHPGALVPPSPEAGIIYTTPYDYPYALTPAGSLLEYPMEPSGVLDLQGWMNPLVLGPGPYKNLAGPQFKLYETKGSPSQQYSVPNYPAATSN
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3096582..3096614,3097446..3097558,3104143..3104445,3109284..3109374,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188500))
location: region:3096582-3188500:-1
so has part: feature:3188356-3188500:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109374:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3096582-3096614:-1:exon

XP_032900784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3097446-3097558:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3096582-3096614:-1:exon

LOC116988304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein quaking-like isoform X1
translation: MMVGEMEAKEKPRPSPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYTDTMNGLVDKLPMDLPDPIGPIMQLQEKLFVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQDRAELKLRRAVEEVKKLLVPAQAEGEDNLKKMQLMELAILNGTYRDANIKAPTLAFSLAATAQGPRLITGPGAPMLPPAALRASTQAGPAIMNIIRPIQTTAVMPNGTPHPGALVPPSPEAGIIYTTPYDYPYALTPAGSLLEYPMEPSGVLGAMATKVRRHDSRVHPYQRIVTADRDLQGWMNPLVLGPGPYKNLAGPQFKLYETKGSPSQQYSVPNYPAATSN
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3096582..3096614,3097446..3097558,3099175..3099249,3104143..3104445,3109284..3109374,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188500))
location: region:3096582-3188500:-1
so has part: feature:3188356-3188500:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109374:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3099175-3099249:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3096582-3096614:-1:exon

XP_032900777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099175-3099249:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3097446-3097558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3096582-3096614:-1:exon

LOC116988304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein quaking-A-like isoform X8
translation: MYTDTMNGLVDKLPMDLPDPIGPIMQLQEKLFVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQDRAELKLRRAVEEVKKLLVPAQAEGEDNLKKMQLMELAILNGTYRDANIKAPTLAFSLAATAQGPRLITGPGAPMLPPAALRASTQAGPAIMNIIRPIQTTAVMPNGTPHPGALVPPSPEAGIIYTTPYDYPYALTPAGSLLEYPMEPSGVLGAMATKVRRHDSRVHPYQRIVTADRDLQGWMNPLVLGPGPYKNLAGPQFKLYETKGSPSQQYSVPNYPAATSN
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3096582..3096614,3097446..3097558,3099175..3099249,3104143..3104445,3109284..3109374,3136909..3137052,3144917..3145033,3160817..3160936))
location: region:3096582-3160936:-1
so has part: feature:3160817-3160936:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109374:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3099175-3099249:-1:exon
so has part: feature:3097446-3097558:-1:exon
so has part: feature:3096582-3096614:-1:exon

XP_032900785.1
type: Protein
SIO_000068: ncbiprotein

position:3160936:-1
position: 3160936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3160817-3160936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3109284-3109374:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3104143-3104445:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3099175-3099249:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3097446-3097558:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3096582-3096614:-1:exon

LOC116988304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988304
product: protein quaking-like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033044895.1
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3099256..3101850,3104143..3104445,3109284..3109374,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188719))
location: region:3099256-3188719:-1
so has part: feature:3188356-3188719:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109374:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3099256-3101850:-1:exon

position:3099256:-1
position: 3099256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099256-3101850:-1:exon

position:3101850:-1
position: 3101850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988304
product: protein quaking-like, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033044896.1
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3099256..3101850,3104143..3104445,3109284..3109371,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188718))
location: region:3099256-3188718:-1
so has part: feature:3188356-3188718:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109371:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3099256-3101850:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099256-3101850:-1:exon

LOC116988304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein quaking-like isoform X10
translation: MMVGEMEAKEKPRPSPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYTDTMNGLVDKLPMDLPDPIGPIMQLQEKLFVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQDRAELKLRRAVEEVKKLLVPAAEGEDNLKKMQLMELAILNGTYRDANIKAPTLAFSLAATAQGPRLITGPGAPMLPPAALRASTQAGPAIMNIIRPIQTTAVMPNGTPHPGALVPPSPEAGIIYTTPYDYPYALTPAGSLLEYPMEPSGVLGMAFPAKG
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3101825..3101850,3104143..3104445,3109284..3109371,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188500))
location: region:3101825-3188500:-1
so has part: feature:3188356-3188500:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109371:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3101825-3101850:-1:exon

XP_032900787.1
type: Protein
SIO_000068: ncbiprotein

position:3101825:-1
position: 3101825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3101825-3101850:-1:exon

LOC116988304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein quaking-like isoform X9
translation: MMVGEMEAKEKPRPSPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYTDTMNGLVDKLPMDLPDPIGPIMQLQEKLFVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQDRAELKLRRAVEEVKKLLVPAQAEGEDNLKKMQLMELAILNGTYRDANIKAPTLAFSLAATAQGPRLITGPGAPMLPPAALRASTQAGPAIMNIIRPIQTTAVMPNGTPHPGALVPPSPEAGIIYTTPYDYPYALTPAGSLLEYPMEPSGVLGMAFPAKG
SIO_010081: LOC116988304
subclass of: SO_0000673
so part of: LOC116988304
location: complement(join(3101825..3101850,3104143..3104445,3109284..3109374,3136909..3137052,3144917..3145033,3160817..3160959,3188356..3188500))
location: region:3101825-3188500:-1
so has part: feature:3188356-3188500:-1:exon
so has part: feature:3160817-3160959:-1:exon
so has part: feature:3144917-3145033:-1:exon
so has part: feature:3136909-3137052:-1:exon
so has part: feature:3109284-3109374:-1:exon
so has part: feature:3104143-3104445:-1:exon
so has part: feature:3101825-3101850:-1:exon

XP_032900786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3188356-3188500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3160817-3160959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144917-3145033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3136909-3137052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3109284-3109374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104143-3104445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3101825-3101850:-1:exon

LOC116988305
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988305
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3202467..3345360)
location: region:3202467-3345360:-1
so has part: feature:3202467-3345360:-1:exon
subclass of: SO_0000010

116988305
type: Gene
SIO_000068: ncbigene

position:3202467:-1
position: 3202467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3345360:-1
position: 3345360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202467-3345360:-1:exon

LOC116988305
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988305
product: parkin coregulated gene protein homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033044897.1
SIO_010081: LOC116988305
subclass of: SO_0000673
so part of: LOC116988305
location: complement(join(3202467..3202784,3259963..3260112,3268083..3268254,3313200..3313334,3345092..3345360))
location: region:3202467-3345360:-1
so has part: feature:3345092-3345360:-1:exon
so has part: feature:3313200-3313334:-1:exon
so has part: feature:3268083-3268254:-1:exon
so has part: feature:3259963-3260112:-1:exon
so has part: feature:3202467-3202784:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3345092-3345360:-1:exon

position:3345092:-1
position: 3345092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3313200-3313334:-1:exon

position:3313200:-1
position: 3313200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3313334:-1
position: 3313334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3268083-3268254:-1:exon

position:3268083:-1
position: 3268083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3268254:-1
position: 3268254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3259963-3260112:-1:exon

position:3259963:-1
position: 3259963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3260112:-1
position: 3260112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3202467-3202784:-1:exon

position:3202784:-1
position: 3202784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116988305
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116988305
product: parkin coregulated gene protein homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033044898.1
SIO_010081: LOC116988305
subclass of: SO_0000673
so part of: LOC116988305
location: complement(join(3202467..3202784,3259963..3260112,3268083..3268254,3313200..3313334,3330607..3330709))
location: region:3202467-3330709:-1
so has part: feature:3330607-3330709:-1:exon
so has part: feature:3313200-3313334:-1:exon
so has part: feature:3268083-3268254:-1:exon
so has part: feature:3259963-3260112:-1:exon
so has part: feature:3202467-3202784:-1:exon

position:3330709:-1
position: 3330709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3330607-3330709:-1:exon

position:3330607:-1
position: 3330607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3313200-3313334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3268083-3268254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3259963-3260112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3202467-3202784:-1:exon

LOC116988305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988305
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: parkin coregulated gene protein homolog isoform X1
translation: MSTLKKQRAARLPLQVANVNKPVIIGQPATGAFKQRPIKPTAFRKFYKRGDFPVAMEHNAKGNRIAWKVEIEQLDYHHYLPLFFDGLCETLHPYEFFARQGVHDMLEHGGPKILPVIPQLIIPIKNALNTRNKHVICTTLKILQHLVVSGERVGEALVPYYRQLLPILNLFKNLNVNMGDGIDYSQQKRENIGDLINETLEVFERFGGEDAFINIKYMVPTYESCILN
SIO_010081: LOC116988305
subclass of: SO_0000673
so part of: LOC116988305
location: complement(join(3202624..3202784,3259963..3260112,3268083..3268254,3313200..3313334,3345092..3345160))
location: region:3202624-3345160:-1
so has part: feature:3345092-3345160:-1:exon
so has part: feature:3313200-3313334:-1:exon
so has part: feature:3268083-3268254:-1:exon
so has part: feature:3259963-3260112:-1:exon
so has part: feature:3202624-3202784:-1:exon

XP_032900788.1
type: Protein
SIO_000068: ncbiprotein

position:3202624:-1
position: 3202624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3345160:-1
position: 3345160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3345092-3345160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3313200-3313334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3268083-3268254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3259963-3260112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3202624-3202784:-1:exon

LOC116988305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116988305
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: parkin coregulated gene protein homolog isoform X2
translation: MTIIGQPATGAFKQRPIKPTAFRKFYKRGDFPVAMEHNAKGNRIAWKVEIEQLDYHHYLPLFFDGLCETLHPYEFFARQGVHDMLEHGGPKILPVIPQLIIPIKNALNTRNKHVICTTLKILQHLVVSGERVGEALVPYYRQLLPILNLFKNLNVNMGDGIDYSQQKRENIGDLINETLEVFERFGGEDAFINIKYMVPTYESCILN
SIO_010081: LOC116988305
subclass of: SO_0000673
so part of: LOC116988305
location: complement(join(3202624..3202784,3259963..3260112,3268083..3268254,3313200..3313334,3330607..3330612))
location: region:3202624-3330612:-1
so has part: feature:3330607-3330612:-1:exon
so has part: feature:3313200-3313334:-1:exon
so has part: feature:3268083-3268254:-1:exon
so has part: feature:3259963-3260112:-1:exon
so has part: feature:3202624-3202784:-1:exon

XP_032900789.1
type: Protein
SIO_000068: ncbiprotein

position:3330612:-1
position: 3330612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3330607-3330612:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3313200-3313334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3268083-3268254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3259963-3260112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3202624-3202784:-1:exon

ptafr
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ptafr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3486349..3506121)
location: region:3486349-3506121:-1
so has part: feature:3486349-3506121:-1:exon
subclass of: SO_0000010

116988306
type: Gene
SIO_000068: ncbigene

position:3486349:-1
position: 3486349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3506121:-1
position: 3506121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3486349-3506121:-1:exon

ptafr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ptafr
product: platelet activating factor receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033044900.1
SIO_010081: ptafr
subclass of: SO_0000673
so part of: ptafr
location: complement(join(3486349..3487530,3505881..3506121))
location: region:3486349-3506121:-1
so has part: feature:3505881-3506121:-1:exon
so has part: feature:3486349-3487530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3505881-3506121:-1:exon

position:3505881:-1
position: 3505881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3486349-3487530:-1:exon

position:3487530:-1
position: 3487530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ptafr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ptafr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor receptor
translation: MLLWPAMGSFDHNSTGHVPGGNDSCQVDSEFRYVLFPVVYTVIFILGILENCYVLWIFRYLAPSSNINEIRILMVNLSVADLLFILTLPFWVVYYVQKGNWTFSDFSCRLAGCLFFINTYCSIAFLAVISYNRYRAVAYPIETSQRSGRKRGCIVSTVIWLIIIASALKFLIQQGTNKVGDVTRCFEGYKTKESMPVVIIHFLLIGAFFLAFLVVIVCNARILCMLSLRVVQPKKSWKVRRQAFRLVCSVIVVFLVCFVPHHLVQGPWTLTVLGLWRSEDCHFRTRVDVAHQITLCLMGLNCVLDPIIYCFLTHKFRKFIQRSVKSWTSTRKSFRTITLIDTNLGEMGQQNNALQ
SIO_010081: ptafr
subclass of: SO_0000673
so part of: ptafr
location: complement(3486420..3487487)
location: region:3486420-3487487:-1
so has part: feature:3486420-3487487:-1:exon

XP_032900791.1
type: Protein
SIO_000068: ncbiprotein

position:3486420:-1
position: 3486420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3487487:-1
position: 3487487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3486420-3487487:-1:exon

dnajc8
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: dnajc8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3529129..3555677)
location: region:3529129-3555677:-1
so has part: feature:3529129-3555677:-1:exon
subclass of: SO_0000010

116988307
type: Gene
SIO_000068: ncbigene

position:3529129:-1
position: 3529129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3555677:-1
position: 3555677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3529129-3555677:-1:exon

dnajc8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dnajc8
product: DnaJ heat shock protein family (Hsp40) member C8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033044901.1
SIO_010081: dnajc8
subclass of: SO_0000673
so part of: dnajc8
location: complement(join(3529129..3529636,3534137..3534212,3536032..3536123,3538486..3538557,3542473..3542567,3543544..3543610,3546881..3546937,3549145..3549246,3555560..3555677))
location: region:3529129-3555677:-1
so has part: feature:3555560-3555677:-1:exon
so has part: feature:3549145-3549246:-1:exon
so has part: feature:3546881-3546937:-1:exon
so has part: feature:3543544-3543610:-1:exon
so has part: feature:3542473-3542567:-1:exon
so has part: feature:3538486-3538557:-1:exon
so has part: feature:3536032-3536123:-1:exon
so has part: feature:3534137-3534212:-1:exon
so has part: feature:3529129-3529636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3555560-3555677:-1:exon

position:3555560:-1
position: 3555560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3549145-3549246:-1:exon

position:3549145:-1
position: 3549145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3549246:-1
position: 3549246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3546881-3546937:-1:exon

position:3546881:-1
position: 3546881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3546937:-1
position: 3546937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3543544-3543610:-1:exon

position:3543544:-1
position: 3543544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3543610:-1
position: 3543610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3542473-3542567:-1:exon

position:3542473:-1
position: 3542473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3542567:-1
position: 3542567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3538486-3538557:-1:exon

position:3538486:-1
position: 3538486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3538557:-1
position: 3538557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3536032-3536123:-1:exon

position:3536032:-1
position: 3536032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3536123:-1
position: 3536123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3534137-3534212:-1:exon

position:3534137:-1
position: 3534137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3534212:-1
position: 3534212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3529129-3529636:-1:exon

position:3529636:-1
position: 3529636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dnajc8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dnajc8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 8
translation: MAAQSGAATGGSSPGTDRIGEEAFKVFLTEVKQIEKRDSVLTPKQQIERLTRPGSTYINLNPFEVLQVDPEATDEELKKRFRQLSILVHPDKNQDDPERAQKAFEAVDKAHKMLMEPDQKKRAIDVIQAARETIEHNMKEKRKTLKKEGKQAIVEEDDAEMFKQSVHKQTMKLFAELEIKRKEREAKDMHERKRQREEEIEQEEKVKRDKEWQKNFEESRDGRVDSWRNFQANKKTKKEKKRSFLKPPKVKMEQR
SIO_010081: dnajc8
subclass of: SO_0000673
so part of: dnajc8
location: complement(join(3529520..3529636,3534137..3534212,3536032..3536123,3538486..3538557,3542473..3542567,3543544..3543610,3546881..3546937,3549145..3549246,3555560..3555649))
location: region:3529520-3555649:-1
so has part: feature:3555560-3555649:-1:exon
so has part: feature:3549145-3549246:-1:exon
so has part: feature:3546881-3546937:-1:exon
so has part: feature:3543544-3543610:-1:exon
so has part: feature:3542473-3542567:-1:exon
so has part: feature:3538486-3538557:-1:exon
so has part: feature:3536032-3536123:-1:exon
so has part: feature:3534137-3534212:-1:exon
so has part: feature:3529520-3529636:-1:exon

XP_032900792.1
type: Protein
SIO_000068: ncbiprotein

position:3529520:-1
position: 3529520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3555649:-1
position: 3555649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3555560-3555649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3549145-3549246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3546881-3546937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3543544-3543610:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3542473-3542567:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3538486-3538557:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3536032-3536123:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3534137-3534212:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3529520-3529636:-1:exon

atp5if1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: atp5if1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3559216..3563084
location: region:3559216-3563084:1
so has part: feature:3559216-3563084:1:exon
subclass of: SO_0000010

116988308
type: Gene
SIO_000068: ncbigene

position:3559216:1
position: 3559216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3563084:1
position: 3563084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3559216-3563084:1:exon

atp5if1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: atp5if1
product: ATP synthase inhibitory factor subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033044902.1
SIO_010081: atp5if1
subclass of: SO_0000673
so part of: atp5if1
location: join(3559216..3559364,3560092..3560204,3562126..3563084)
location: region:3559216-3563084:1
so has part: feature:3559216-3559364:1:exon
so has part: feature:3560092-3560204:1:exon
so has part: feature:3562126-3563084:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3559216-3559364:1:exon

position:3559364:1
position: 3559364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3560092-3560204:1:exon

position:3560092:1
position: 3560092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3560204:1
position: 3560204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3562126-3563084:1:exon

position:3562126:1
position: 3562126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

atp5if1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: atp5if1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATPase inhibitor, mitochondrial
translation: MTMARAVRSVRAVLAPHIRSYGDSSQLGELGKGAGKGGGGGGSIREAGGAFGTRQAALEERYFREKERDQIENLQKHHQEEIHHHEKEIQRLQDEVKRHKGKIKKLRQSDDSDD
SIO_010081: atp5if1
subclass of: SO_0000673
so part of: atp5if1
location: join(3559287..3559364,3560092..3560204,3562126..3562279)
location: region:3559287-3562279:1
so has part: feature:3559287-3559364:1:exon
so has part: feature:3560092-3560204:1:exon
so has part: feature:3562126-3562279:1:exon

XP_032900793.1
type: Protein
SIO_000068: ncbiprotein

position:3559287:1
position: 3559287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3562279:1
position: 3562279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3559287-3559364:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3560092-3560204:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3562126-3562279:1:exon

trnaw-cca
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trnaw-cca
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3577499..3577570)
location: region:3577499-3577570:-1
so has part: feature:3577499-3577570:-1:exon
subclass of: SO_0000663

116988691
type: Gene
SIO_000068: ncbigene

position:3577499:-1
position: 3577499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3577570:-1
position: 3577570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3577499-3577570:-1:exon

trnaw-cca
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 386614
gene: trnaw-cca
product: tRNA-Trp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tryptophan (anticodon CCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3577536..3577538),aa:Trp, seq:cca)
SIO_010081: trnaw-cca
subclass of: SO_0000673
so part of: trnaw-cca
location: complement(3577499..3577570)
location: region:3577499-3577570:-1
so has part: feature:3577499-3577570:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3577499-3577570:-1:exon

rpl13a
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rpl13a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3577752..3583701
location: region:3577752-3583701:1
so has part: feature:3577752-3583701:1:exon
subclass of: SO_0000010

116988309
type: Gene
SIO_000068: ncbigene

position:3577752:1
position: 3577752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3583701:1
position: 3583701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3577752-3583701:1:exon

rpl13a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rpl13a
product: ribosomal protein L13a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_033044903.1
SIO_010081: rpl13a
subclass of: SO_0000673
so part of: rpl13a
location: join(3577752..3577857,3579867..3579939,3580112..3580177,3580500..3580601,3581265..3581350,3581533..3581592,3583011..3583133,3583571..3583701)
location: region:3577752-3583701:1
so has part: feature:3577752-3577857:1:exon
so has part: feature:3579867-3579939:1:exon
so has part: feature:3580112-3580177:1:exon
so has part: feature:3580500-3580601:1:exon
so has part: feature:3581265-3581350:1:exon
so has part: feature:3581533-3581592:1:exon
so has part: feature:3583011-3583133:1:exon
so has part: feature:3583571-3583701:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3577752-3577857:1:exon

position:3577857:1
position: 3577857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3579867-3579939:1:exon

position:3579867:1
position: 3579867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3579939:1
position: 3579939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3580112-3580177:1:exon

position:3580112:1
position: 3580112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3580177:1
position: 3580177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3580500-3580601:1:exon

position:3580500:1
position: 3580500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3580601:1
position: 3580601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3581265-3581350:1:exon

position:3581265:1
position: 3581265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3581350:1
position: 3581350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3581533-3581592:1:exon

position:3581533:1
position: 3581533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3581592:1
position: 3581592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3583011-3583133:1:exon

position:3583011:1
position: 3583011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3583133:1
position: 3583133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3583571-3583701:1:exon

position:3583571:1
position: 3583571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rpl13a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rpl13a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L13a
translation: MADGFNKVLLLDGRGHLLGRLAAIVAKQVLLGHKVVVVRCEGINISGNFYRNKLKYLSFLRKRMNTNPSRGPFHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKRKRMVVPAALKIVRLKPTRKFALLGRLAHEVGWKYQAITATLEEKRKEKAKIYYSKKKKTLKLKRLAEKNVESKIAKYTEVLKLHGVLV
SIO_010081: rpl13a
subclass of: SO_0000673
so part of: rpl13a
location: join(3577837..3577857,3579867..3579939,3580112..3580177,3580500..3580601,3581265..3581350,3581533..3581592,3583011..3583133,3583571..3583657)
location: region:3577837-3583657:1
so has part: feature:3577837-3577857:1:exon
so has part: feature:3579867-3579939:1:exon
so has part: feature:3580112-3580177:1:exon
so has part: feature:3580500-3580601:1:exon
so has part: feature:3581265-3581350:1:exon
so has part: feature:3581533-3581592:1:exon
so has part: feature:3583011-3583133:1:exon
so has part: feature:3583571-3583657:1:exon

XP_032900794.1
type: Protein
SIO_000068: ncbiprotein

position:3577837:1
position: 3577837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3583657:1
position: 3583657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3577837-3577857:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3579867-3579939:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3580112-3580177:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3580500-3580601:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3581265-3581350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3581533-3581592:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3583011-3583133:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3583571-3583657:1:exon

LOC116988674
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988674
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3580265..3580339
location: region:3580265-3580339:1
so has part: feature:3580265-3580339:1:exon
subclass of: SO_0000578

116988674
type: Gene
SIO_000068: ncbigene

position:3580265:1
position: 3580265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3580339:1
position: 3580339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3580265-3580339:1:exon

LOC116988674
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snoRNA
gene: LOC116988674
product: small nucleolar RNA Z195/SNORD33/SNORD32 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00133
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004416026.1
SIO_010081: LOC116988674
subclass of: SO_0000673
so part of: LOC116988674
location: 3580265..3580339
location: region:3580265-3580339:1
so has part: feature:3580265-3580339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3580265-3580339:1:exon

LOC116988676
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988676
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3581392..3581466
location: region:3581392-3581466:1
so has part: feature:3581392-3581466:1:exon
subclass of: SO_0000578

116988676
type: Gene
SIO_000068: ncbigene

position:3581392:1
position: 3581392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3581466:1
position: 3581466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3581392-3581466:1:exon

LOC116988676
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snoRNA
gene: LOC116988676
product: small nucleolar RNA SNORD34
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00147
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004416027.1
SIO_010081: LOC116988676
subclass of: SO_0000673
so part of: LOC116988676
location: 3581392..3581466
location: region:3581392-3581466:1
so has part: feature:3581392-3581466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3581392-3581466:1:exon

hnrnpr
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: hnrnpr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3588735..3610917
location: region:3588735-3610917:1
so has part: feature:3588735-3610917:1:exon
subclass of: SO_0000010

116988310
type: Gene
SIO_000068: ncbigene

position:3588735:1
position: 3588735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3610917:1
position: 3610917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3588735-3610917:1:exon

hnrnpr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hnrnpr
product: heterogeneous nuclear ribonucleoprotein R, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_033044905.1
SIO_010081: hnrnpr
subclass of: SO_0000673
so part of: hnrnpr
location: join(3588735..3588887,3592689..3592860,3599160..3599278,3600339..3600446,3603344..3603457,3603817..3603993,3604178..3604313,3606296..3606501,3607513..3607662,3609436..3609557,3609639..3610906)
location: region:3588735-3610906:1
so has part: feature:3588735-3588887:1:exon
so has part: feature:3592689-3592860:1:exon
so has part: feature:3599160-3599278:1:exon
so has part: feature:3600339-3600446:1:exon
so has part: feature:3603344-3603457:1:exon
so has part: feature:3603817-3603993:1:exon
so has part: feature:3604178-3604313:1:exon
so has part: feature:3606296-3606501:1:exon
so has part: feature:3607513-3607662:1:exon
so has part: feature:3609436-3609557:1:exon
so has part: feature:3609639-3610906:1:exon

position:3610906:1
position: 3610906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3588735-3588887:1:exon

position:3588887:1
position: 3588887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3592689-3592860:1:exon

position:3592689:1
position: 3592689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3592860:1
position: 3592860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3599160-3599278:1:exon

position:3599160:1
position: 3599160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3599278:1
position: 3599278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3600339-3600446:1:exon

position:3600339:1
position: 3600339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3600446:1
position: 3600446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3603344-3603457:1:exon

position:3603344:1
position: 3603344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3603457:1
position: 3603457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3603817-3603993:1:exon

position:3603817:1
position: 3603817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3603993:1
position: 3603993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3604178-3604313:1:exon

position:3604178:1
position: 3604178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3604313:1
position: 3604313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3606296-3606501:1:exon

position:3606296:1
position: 3606296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3606501:1
position: 3606501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3607513-3607662:1:exon

position:3607513:1
position: 3607513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3607662:1
position: 3607662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3609436-3609557:1:exon

position:3609436:1
position: 3609436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3609557:1
position: 3609557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3609639-3610906:1:exon

position:3609639:1
position: 3609639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

hnrnpr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hnrnpr
product: heterogeneous nuclear ribonucleoprotein R, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033044904.1
SIO_010081: hnrnpr
subclass of: SO_0000673
so part of: hnrnpr
location: join(3588743..3588887,3592689..3592872,3599160..3599278,3600339..3600446,3603344..3603457,3603817..3603993,3604178..3604313,3606296..3606501,3607513..3607662,3609436..3609557,3609639..3610917)
location: region:3588743-3610917:1
so has part: feature:3588743-3588887:1:exon
so has part: feature:3592689-3592872:1:exon
so has part: feature:3599160-3599278:1:exon
so has part: feature:3600339-3600446:1:exon
so has part: feature:3603344-3603457:1:exon
so has part: feature:3603817-3603993:1:exon
so has part: feature:3604178-3604313:1:exon
so has part: feature:3606296-3606501:1:exon
so has part: feature:3607513-3607662:1:exon
so has part: feature:3609436-3609557:1:exon
so has part: feature:3609639-3610917:1:exon

position:3588743:1
position: 3588743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3588743-3588887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3592689-3592872:1:exon

position:3592872:1
position: 3592872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3599160-3599278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3600339-3600446:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3603344-3603457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3603817-3603993:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3604178-3604313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3606296-3606501:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3607513-3607662:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3609436-3609557:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3609639-3610917:1:exon

hnrnpr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hnrnpr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein R isoform X1
translation: MATEVNGNAAQVKEDEEPMDTSSAVTHSEHYQVLLDAGLPQKVAERLDDIFQTGTYQGLVSYADLDERAIDALREFNEEGAMAVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGNKVQDATKGPDESKIKALLERTGYTLDVTTGQRKYGGPPPDGVHAGPQPGIGTEVFVGKIPRDLYEDELVPLFEKAGAIWDLRLMMDPLSGQNRGYAFVTFCNKDAAQEAVKLCDNCEIRPGKHIGVCISVANNRLFVGSIPKNKTKENIMEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEFEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLASSVTEDILEKTFSQFGKLERVKKLKDYAFVHFEDRDSAVKAMSQMNGREVEGEDIEIVLAKPPDKKKKERQAQRQATRTQVYEDYYYYPPPRMPPPIRGRVRGSRGGSYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDAYPVQRGRGGRGGRSAIPPPRGRGVPPPRGRAGYPQRGTPMGPPRGARSGRGGPQPPQRGRGARGGRGNRGGNVGGKRKADGYNQPDSKRRQTNQQNWGSQPIAQQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
SIO_010081: hnrnpr
subclass of: SO_0000673
so part of: hnrnpr
location: join(3592701..3592872,3599160..3599278,3600339..3600446,3603344..3603457,3603817..3603993,3604178..3604313,3606296..3606501,3607513..3607662,3609436..3609557,3609639..3610248)
location: region:3592701-3610248:1
so has part: feature:3592701-3592872:1:exon
so has part: feature:3599160-3599278:1:exon
so has part: feature:3600339-3600446:1:exon
so has part: feature:3603344-3603457:1:exon
so has part: feature:3603817-3603993:1:exon
so has part: feature:3604178-3604313:1:exon
so has part: feature:3606296-3606501:1:exon
so has part: feature:3607513-3607662:1:exon
so has part: feature:3609436-3609557:1:exon
so has part: feature:3609639-3610248:1:exon

XP_032900795.1
type: Protein
SIO_000068: ncbiprotein

position:3592701:1
position: 3592701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3610248:1
position: 3610248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3592701-3592872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3599160-3599278:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3600339-3600446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3603344-3603457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3603817-3603993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3604178-3604313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3606296-3606501:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3607513-3607662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3609436-3609557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3609639-3610248:1:exon

hnrnpr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hnrnpr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein R isoform X2
translation: MATEVNGNAAQVKEDEEPMDTSSAVTHSEHYQVLLDAGLPQKVAERLDDIFQTGLVSYADLDERAIDALREFNEEGAMAVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGNKVQDATKGPDESKIKALLERTGYTLDVTTGQRKYGGPPPDGVHAGPQPGIGTEVFVGKIPRDLYEDELVPLFEKAGAIWDLRLMMDPLSGQNRGYAFVTFCNKDAAQEAVKLCDNCEIRPGKHIGVCISVANNRLFVGSIPKNKTKENIMEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEFEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLASSVTEDILEKTFSQFGKLERVKKLKDYAFVHFEDRDSAVKAMSQMNGREVEGEDIEIVLAKPPDKKKKERQAQRQATRTQVYEDYYYYPPPRMPPPIRGRVRGSRGGSYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDAYPVQRGRGGRGGRSAIPPPRGRGVPPPRGRAGYPQRGTPMGPPRGARSGRGGPQPPQRGRGARGGRGNRGGNVGGKRKADGYNQPDSKRRQTNQQNWGSQPIAQQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
SIO_010081: hnrnpr
subclass of: SO_0000673
so part of: hnrnpr
location: join(3592701..3592860,3599160..3599278,3600339..3600446,3603344..3603457,3603817..3603993,3604178..3604313,3606296..3606501,3607513..3607662,3609436..3609557,3609639..3610248)
location: region:3592701-3610248:1
so has part: feature:3592701-3592860:1:exon
so has part: feature:3599160-3599278:1:exon
so has part: feature:3600339-3600446:1:exon
so has part: feature:3603344-3603457:1:exon
so has part: feature:3603817-3603993:1:exon
so has part: feature:3604178-3604313:1:exon
so has part: feature:3606296-3606501:1:exon
so has part: feature:3607513-3607662:1:exon
so has part: feature:3609436-3609557:1:exon
so has part: feature:3609639-3610248:1:exon

XP_032900796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3592701-3592860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3599160-3599278:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3600339-3600446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3603344-3603457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3603817-3603993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3604178-3604313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3606296-3606501:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3607513-3607662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3609436-3609557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3609639-3610248:1:exon

LOC116988311
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988311
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3617036..3626646
location: region:3617036-3626646:1
so has part: feature:3617036-3626646:1:exon
subclass of: SO_0000011

116988311
type: Gene
SIO_000068: ncbigene

position:3617036:1
position: 3617036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3626646:1
position: 3626646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3617036-3626646:1:exon

LOC116988311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988311
product: uncharacterized LOC116988311, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_004415911.1
SIO_010081: LOC116988311
subclass of: SO_0000673
so part of: LOC116988311
location: join(3617036..3622400,3623176..3624183,3626175..3626646)
location: region:3617036-3626646:1
so has part: feature:3617036-3622400:1:exon
so has part: feature:3623176-3624183:1:exon
so has part: feature:3626175-3626646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3617036-3622400:1:exon

position:3622400:1
position: 3622400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3623176-3624183:1:exon

position:3623176:1
position: 3623176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3624183:1
position: 3624183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3626175-3626646:1:exon

position:3626175:1
position: 3626175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116988311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988311
product: uncharacterized LOC116988311, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XR_004415910.1
SIO_010081: LOC116988311
subclass of: SO_0000673
so part of: LOC116988311
location: join(3617040..3619681,3622327..3624183,3626175..3626646)
location: region:3617040-3626646:1
so has part: feature:3617040-3619681:1:exon
so has part: feature:3622327-3624183:1:exon
so has part: feature:3626175-3626646:1:exon

position:3617040:1
position: 3617040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3617040-3619681:1:exon

position:3619681:1
position: 3619681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3622327-3624183:1:exon

position:3622327:1
position: 3622327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3626175-3626646:1:exon

LOC116988311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988311
product: uncharacterized LOC116988311, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XR_004415912.1
SIO_010081: LOC116988311
subclass of: SO_0000673
so part of: LOC116988311
location: join(3617056..3622400,3624113..3624183,3626175..3626646)
location: region:3617056-3626646:1
so has part: feature:3617056-3622400:1:exon
so has part: feature:3624113-3624183:1:exon
so has part: feature:3626175-3626646:1:exon

position:3617056:1
position: 3617056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3617056-3622400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3624113-3624183:1:exon

position:3624113:1
position: 3624113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3626175-3626646:1:exon

LOC116988311
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116988311
product: uncharacterized LOC116988311, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XR_004415909.1
SIO_010081: LOC116988311
subclass of: SO_0000673
so part of: LOC116988311
location: join(3617057..3624183,3626175..3626646)
location: region:3617057-3626646:1
so has part: feature:3617057-3624183:1:exon
so has part: feature:3626175-3626646:1:exon

position:3617057:1
position: 3617057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3617057-3624183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3626175-3626646:1:exon

htr1d
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: htr1d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3885909..3887309
location: region:3885909-3887309:1
so has part: feature:3885909-3887309:1:exon
subclass of: SO_0000010

116988313
type: Gene
SIO_000068: ncbigene

position:3885909:1
position: 3885909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3887309:1
position: 3887309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3885909-3887309:1:exon

htr1d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: htr1d
product: 5-hydroxytryptamine receptor 1D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033044906.1
SIO_010081: htr1d
subclass of: SO_0000673
so part of: htr1d
location: 3885909..3887309
location: region:3885909-3887309:1
so has part: feature:3885909-3887309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3885909-3887309:1:exon

htr1d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: htr1d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 1D
translation: MALGNFSTVPPENWTAAPAGWDEGAQLGLRVSLFVVLGLVTLATILSNSFVLVTICLTRKLHTPANYLIGSLAVTDLLVAIVVMPISIVYTVIKTWTLGQIMCDIWLSSDITFCTASILHLCVIALDRYWAITDALEYTKRRTPTRAAVMIAVVWVISVSISIPPLFWRQSKALEELKDCTVNTDQIFYTIYSTFGAFYIPSVLLVILYGRIYLAARSRIQKPPSAFGKRFTTAQLVSGSTGSSLCSVGFTSQEILPHSGESPIYLNHVKVKVSDSVLERKRICAARERKATKTLGIILGAFIFCWLPFFVVVLVIGTCKEACWFHPALFDFFTWLGYLNSLINPVIYTAFNEDFKRAFQKLVRLRRC
SIO_010081: htr1d
subclass of: SO_0000673
so part of: htr1d
location: 3886193..3887299
location: region:3886193-3887299:1
so has part: feature:3886193-3887299:1:exon

XP_032900797.1
type: Protein
SIO_000068: ncbiprotein

position:3886193:1
position: 3886193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3887299:1
position: 3887299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3886193-3887299:1:exon

LOC116988624
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116988624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3926448..3934321
location: region:3926448-3934321:1
so has part: feature:3926448-3934321:1:exon
subclass of: SO_0000011

116988624
type: Gene
SIO_000068: ncbigene

position:3926448:1
position: 3926448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3934321:1
position: 3934321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition