Amblyraja radiata isolate CabotCenter1 chromosome 23, sAmbRad1.1.pri, whole genome shotgun sequence.
type: Entry
definition: Amblyraja radiata isolate CabotCenter1 chromosome 23, sAmbRad1.1.pri, whole genome shotgun sequence.
sequence version: NC_045978.1
sequence date: 2021-04-05
sequence: sequence
division: CON
label: NC_045978.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA610638
dblink: SAMN09948523
keyword: WGS
keyword: RefSeq
source: Amblyraja radiata (thorny skate)
organism: Amblyraja radiata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Amblyraja.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021388.1.\nAssembly name: sAmbRad1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/21. The original whole-genome shotgun project has the\naccession JAAGWR000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 13-JAN-2020\nAssembly Method :: Canu v. 1.7; purge_haplotigs v. bitbucket\n 7.10.2018; scaff10x v. 4.1.0; Bionano\n Solve DLS v. 3.3; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes Illumina polishing v.\n 1.3.1; purge_dups v.\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n gEVAL manual curation v. 2020-01-13; VGP\n assembly pipeline v. 1.5\nAssembly Name :: sAmbRad1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 128.24x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Amblyraja radiata Updated Annotation\n Release 100.20210331\nAnnotation Version :: 100.20210331\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 42150951
topology: linear
so has quality: SO_0000987
location: 1..42150951
location: region:1-42150951:1
RO_0002162: 386614

NC_045978
type: RefSeq
SIO_000068: refseq

PRJNA610638
type: BioProject
SIO_000068: bioproject

SAMN09948523
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42150951:1
position: 42150951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-42150951:1:source
so part of: sequence
organism: Amblyraja radiata
mol type: genomic DNA
isolate: CabotCenter1
chromosome: 23
sex: male
tissue type: testis, liver
country: USA: Gulf of Main
lat lon: 43.1336 N 68.3266 W
collection date: 2017-09-18
collected by: Jeff Kneebone

386614
type: Taxonomy
SIO_000068: taxonomy

myl9
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: myl9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 22551..39333
location: region:22551-39333:1
so has part: feature:22551-39333:1:exon
subclass of: SO_0000010

116986122
type: Gene
SIO_000068: ncbigene

position:22551:1
position: 22551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39333:1
position: 39333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22551-39333:1:exon

myl9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: myl9
product: myosin light chain 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 92 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033041284.1
SIO_010081: myl9
subclass of: SO_0000673
so part of: myl9
location: join(22551..22670,31524..31724,33371..33532,38348..39333)
location: region:22551-39333:1
so has part: feature:22551-22670:1:exon
so has part: feature:31524-31724:1:exon
so has part: feature:33371-33532:1:exon
so has part: feature:38348-39333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22551-22670:1:exon

position:22670:1
position: 22670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31524-31724:1:exon

position:31524:1
position: 31524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31724:1
position: 31724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:33371-33532:1:exon

position:33371:1
position: 33371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33532:1
position: 33532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:38348-39333:1:exon

position:38348:1
position: 38348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

myl9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: myl9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light polypeptide 9
translation: MSSKRAKAKTAKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPSDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEGTGFIHEDHLRDLLTTMGDRFTDEEVDELFREAPIDKKSNFNYVEFTRILKHGAKDKDD
SIO_010081: myl9
subclass of: SO_0000673
so part of: myl9
location: join(31541..31724,33371..33532,38348..38520)
location: region:31541-38520:1
so has part: feature:31541-31724:1:exon
so has part: feature:33371-33532:1:exon
so has part: feature:38348-38520:1:exon

XP_032897175.1
type: Protein
SIO_000068: ncbiprotein

position:31541:1
position: 31541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38520:1
position: 38520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31541-31724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33371-33532:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38348-38520:1:exon

tgif2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tgif2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 48890..66074
location: region:48890-66074:1
so has part: feature:48890-66074:1:exon
subclass of: SO_0000010

116986121
type: Gene
SIO_000068: ncbigene

position:48890:1
position: 48890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66074:1
position: 66074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48890-66074:1:exon

tgif2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tgif2
product: TGFB induced factor homeobox 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033041282.1
SIO_010081: tgif2
subclass of: SO_0000673
so part of: tgif2
location: join(48890..49036,49785..49981,63995..66074)
location: region:48890-66074:1
so has part: feature:48890-49036:1:exon
so has part: feature:49785-49981:1:exon
so has part: feature:63995-66074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48890-49036:1:exon

position:49036:1
position: 49036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49785-49981:1:exon

position:49785:1
position: 49785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49981:1
position: 49981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:63995-66074:1:exon

position:63995:1
position: 63995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tgif2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tgif2
product: TGFB induced factor homeobox 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033041283.1
SIO_010081: tgif2
subclass of: SO_0000673
so part of: tgif2
location: join(48890..49036,49788..49981,63995..66074)
location: region:48890-66074:1
so has part: feature:48890-49036:1:exon
so has part: feature:49788-49981:1:exon
so has part: feature:63995-66074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48890-49036:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49788-49981:1:exon

position:49788:1
position: 49788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:63995-66074:1:exon

tgif2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tgif2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein TGIF2 isoform X1
translation: MKAARKAAVGGRSSDSDSMDEGMAGKRKRHVIFSKESVKVLRDWLYEHRLNAYPSEQEKLSLSGQADLSVLQVSNWFINARRRLLPDMLRKDGKDPHQFTISRKSKSSELTPSRRTGAPNLENSASATSSTILPASIRPSVICHATTSTVKDISLLFCPDSGNGDENTSKLTDHKLAQPLFNTDNPTDLVICTGPTSPNNGLFNTPPPTPPELHQDFSGFQLLVDVALQQAAELESQKQNVMVSS
SIO_010081: tgif2
subclass of: SO_0000673
so part of: tgif2
location: join(49018..49036,49785..49981,63995..64516)
location: region:49018-64516:1
so has part: feature:49018-49036:1:exon
so has part: feature:49785-49981:1:exon
so has part: feature:63995-64516:1:exon

XP_032897173.1
type: Protein
SIO_000068: ncbiprotein

position:49018:1
position: 49018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64516:1
position: 64516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49018-49036:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49785-49981:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63995-64516:1:exon

tgif2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tgif2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein TGIF2 isoform X2
translation: MKAARKAVGGRSSDSDSMDEGMAGKRKRHVIFSKESVKVLRDWLYEHRLNAYPSEQEKLSLSGQADLSVLQVSNWFINARRRLLPDMLRKDGKDPHQFTISRKSKSSELTPSRRTGAPNLENSASATSSTILPASIRPSVICHATTSTVKDISLLFCPDSGNGDENTSKLTDHKLAQPLFNTDNPTDLVICTGPTSPNNGLFNTPPPTPPELHQDFSGFQLLVDVALQQAAELESQKQNVMVSS
SIO_010081: tgif2
subclass of: SO_0000673
so part of: tgif2
location: join(49018..49036,49788..49981,63995..64516)
location: region:49018-64516:1
so has part: feature:49018-49036:1:exon
so has part: feature:49788-49981:1:exon
so has part: feature:63995-64516:1:exon

XP_032897174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49018-49036:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49788-49981:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63995-64516:1:exon

dlgap4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: dlgap4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(84639..330976)
location: region:84639-330976:-1
so has part: feature:84639-330976:-1:exon
subclass of: SO_0000010

116986123
type: Gene
SIO_000068: ncbigene

position:84639:-1
position: 84639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330976:-1
position: 330976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84639-330976:-1:exon

dlgap4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dlgap4
product: DLG associated protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033041285.1
SIO_010081: dlgap4
subclass of: SO_0000673
so part of: dlgap4
location: complement(join(84639..86009,88317..88469,93067..93158,95452..95870,98816..98907,101324..101688,176460..176700,177707..177854,198186..198406,207918..208924,258044..258172,330890..330976))
location: region:84639-330976:-1
so has part: feature:330890-330976:-1:exon
so has part: feature:258044-258172:-1:exon
so has part: feature:207918-208924:-1:exon
so has part: feature:198186-198406:-1:exon
so has part: feature:177707-177854:-1:exon
so has part: feature:176460-176700:-1:exon
so has part: feature:101324-101688:-1:exon
so has part: feature:98816-98907:-1:exon
so has part: feature:95452-95870:-1:exon
so has part: feature:93067-93158:-1:exon
so has part: feature:88317-88469:-1:exon
so has part: feature:84639-86009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330890-330976:-1:exon

position:330890:-1
position: 330890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:258044-258172:-1:exon

position:258044:-1
position: 258044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258172:-1
position: 258172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:207918-208924:-1:exon

position:207918:-1
position: 207918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208924:-1
position: 208924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:198186-198406:-1:exon

position:198186:-1
position: 198186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198406:-1
position: 198406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:177707-177854:-1:exon

position:177707:-1
position: 177707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177854:-1
position: 177854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:176460-176700:-1:exon

position:176460:-1
position: 176460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176700:-1
position: 176700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:101324-101688:-1:exon

position:101324:-1
position: 101324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101688:-1
position: 101688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:98816-98907:-1:exon

position:98816:-1
position: 98816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98907:-1
position: 98907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:95452-95870:-1:exon

position:95452:-1
position: 95452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95870:-1
position: 95870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:93067-93158:-1:exon

position:93067:-1
position: 93067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93158:-1
position: 93158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:88317-88469:-1:exon

position:88317:-1
position: 88317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88469:-1
position: 88469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:84639-86009:-1:exon

position:86009:-1
position: 86009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dlgap4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dlgap4
product: DLG associated protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033041287.1
SIO_010081: dlgap4
subclass of: SO_0000673
so part of: dlgap4
location: complement(join(84639..86009,88317..88469,93067..93158,95452..95870,98816..98907,106271..106324,145094..145156))
location: region:84639-145156:-1
so has part: feature:145094-145156:-1:exon
so has part: feature:106271-106324:-1:exon
so has part: feature:98816-98907:-1:exon
so has part: feature:95452-95870:-1:exon
so has part: feature:93067-93158:-1:exon
so has part: feature:88317-88469:-1:exon
so has part: feature:84639-86009:-1:exon

position:145156:-1
position: 145156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145094-145156:-1:exon

position:145094:-1
position: 145094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106271-106324:-1:exon

position:106271:-1
position: 106271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106324:-1
position: 106324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:98816-98907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95452-95870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93067-93158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88317-88469:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84639-86009:-1:exon

dlgap4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dlgap4
product: DLG associated protein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033041288.1
SIO_010081: dlgap4
subclass of: SO_0000673
so part of: dlgap4
location: complement(join(84639..86009,88317..88469,93067..93158,95452..95870,98816..98907,101324..101688,106271..106324,145094..145156))
location: region:84639-145156:-1
so has part: feature:145094-145156:-1:exon
so has part: feature:106271-106324:-1:exon
so has part: feature:101324-101688:-1:exon
so has part: feature:98816-98907:-1:exon
so has part: feature:95452-95870:-1:exon
so has part: feature:93067-93158:-1:exon
so has part: feature:88317-88469:-1:exon
so has part: feature:84639-86009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145094-145156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106271-106324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101324-101688:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98816-98907:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95452-95870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93067-93158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88317-88469:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84639-86009:-1:exon

dlgap4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dlgap4
product: DLG associated protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033041286.1
SIO_010081: dlgap4
subclass of: SO_0000673
so part of: dlgap4
location: complement(join(84639..86009,88317..88469,93067..93158,95452..95870,98816..98907,101324..101688,105614..105750))
location: region:84639-105750:-1
so has part: feature:105614-105750:-1:exon
so has part: feature:101324-101688:-1:exon
so has part: feature:98816-98907:-1:exon
so has part: feature:95452-95870:-1:exon
so has part: feature:93067-93158:-1:exon
so has part: feature:88317-88469:-1:exon
so has part: feature:84639-86009:-1:exon

position:105750:-1
position: 105750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105614-105750:-1:exon

position:105614:-1
position: 105614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:101324-101688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98816-98907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95452-95870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93067-93158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88317-88469:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84639-86009:-1:exon

dlgap4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dlgap4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 4 isoform X1
translation: MKGLGANRSRHLSDNCDPTEQMYPSPMQERNPYLLTPVDPYQMEQHRFPSSNAMPADCLLPLNNQIASSTFPRIHYNSHFDLPDECAFTPNTSGGKINRLPANLLDQFEKQLPMHRDGFHTLQFQRSDKHRSESPGRIRHLVHSVQKLFAKSQSLEGSGKGSLNGSKFGSDDSKQTKRSKSKDRKLESKRRTRTNISGWWSSDDNLDSDNYNYRNPMSLMTLGRRPDHGPAKYLMNAYNTISEHTLKASKSNNDLKCSPCVNIPINTDSKYIKRGSWSTLTLSQTREVCQNSAATMDRAMLKSRSYHHDLASQYLKVPLHDDWNSTLSRGRVGEIPCRRMRSGSYIKAMGDDDSEDSEMSPKPSPKTAARRQSYLKATQQSLSEQISQRNQSYLASVSESIHRSLDCLDTVDLNSANFHGWNEDDMGSTDTLKSNLINQEQEMDFSNQYENICEPVFNEVDLQAVDALDLPIPGCFRSRSHSYLRAIQAGCSQDDDNVSVRSVSPPPITTTVRTMQTNTMSSCITTYKKTPPPVPPRTTSKPFISVTVQSSTESAQDTYLDNQDQKSDINSQSGLSNSSDSLDSARALNSTKTGSVSIPLREQSESHHRNATVTTDIGSLVSEDPKLETLPKRKLSSIGIQVDCSPNLIKEQDSHLINKFQSIGIQVEDEWHLSRSSTMMSKQETDSDTQECSNATAGSQDISNQFSDSNQHHHISNSEPSVRQHAKSSQIKNKAFAYSDNLDPALDPSSLPPPEPWLESTTNLPVEPVHASSCCRDGYWFLKLLQAEKERMEGWCHQMEKETKENNLSEEVLGKIRSAVGSAQLLMSQKLQQFHGLCEQNLNQNANPQPTAQDLAGFWDMLQLSIEDISLKFDELYHLKTNDWQLVEMPEKKEEKKLPPPVPKKPAKGKTPLNREKLTDSVDKQRQEARKRLMAAKRAASVRQNSATESADSIEIYVPEAQTRL
SIO_010081: dlgap4
subclass of: SO_0000673
so part of: dlgap4
location: complement(join(85791..86009,88317..88469,93067..93158,95452..95870,98816..98907,101324..101688,176460..176700,177707..177854,198186..198406,207918..208865))
location: region:85791-208865:-1
so has part: feature:207918-208865:-1:exon
so has part: feature:198186-198406:-1:exon
so has part: feature:177707-177854:-1:exon
so has part: feature:176460-176700:-1:exon
so has part: feature:101324-101688:-1:exon
so has part: feature:98816-98907:-1:exon
so has part: feature:95452-95870:-1:exon
so has part: feature:93067-93158:-1:exon
so has part: feature:88317-88469:-1:exon
so has part: feature:85791-86009:-1:exon

XP_032897176.1
type: Protein
SIO_000068: ncbiprotein

position:85791:-1
position: 85791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208865:-1
position: 208865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207918-208865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198186-198406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177707-177854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176460-176700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101324-101688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98816-98907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95452-95870:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93067-93158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88317-88469:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:85791-86009:-1:exon

dlgap4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dlgap4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 4 isoform X2
translation: MGNASCLSSCITTYKKTPPPVPPRTTSKPFISVTVQSSTESAQDTYLDNQDQKSDINSQSGLSNSSDSLDSARALNSTKTGSVSIPLREQSESHHRNATVTTDIGSLVSEDPKLETLPKRKLSSIGIQVDCSPNLIKEQDSHLINKFQSIGIQVEDEWHLSRSSTMMSKQETDSDTQECSNATAGSQDISNQFSDSNQHHHISNSEPSVRQHAKSSQIKNKAFAYSDNLDPALDPSSLPPPEPWLESTTNLPVEPVHASSCCRDGYWFLKLLQAEKERMEGWCHQMEKETKENNLSEEVLGKIRSAVGSAQLLMSQKLQQFHGLCEQNLNQNANPQPTAQDLAGFWDMLQLSIEDISLKFDELYHLKTNDWQLVEMPEKKEEKKLPPPVPKKPAKGKTPLNREKLTDSVDKQRQEARKRLMAAKRAASVRQNSATESADSIEIYVPEAQTRL
SIO_010081: dlgap4
subclass of: SO_0000673
so part of: dlgap4
location: complement(join(85791..86009,88317..88469,93067..93158,95452..95870,98816..98907,101324..101688,105614..105632))
location: region:85791-105632:-1
so has part: feature:105614-105632:-1:exon
so has part: feature:101324-101688:-1:exon
so has part: feature:98816-98907:-1:exon
so has part: feature:95452-95870:-1:exon
so has part: feature:93067-93158:-1:exon
so has part: feature:88317-88469:-1:exon
so has part: feature:85791-86009:-1:exon

XP_032897177.1
type: Protein
SIO_000068: ncbiprotein

position:105632:-1
position: 105632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105614-105632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:101324-101688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98816-98907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95452-95870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93067-93158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88317-88469:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85791-86009:-1:exon

dlgap4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dlgap4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 4 isoform X3
translation: MMSKQETDSDTQECSNATAGSQDISNQFSDSNQHHHISNSEPSVRQHAKSSQIKNKAFAYSDNLDPALDPSSLPPPEPWLESTTNLPVEPVHASSCCRDGYWFLKLLQAEKERMEGWCHQMEKETKENNLSEEVLGKIRSAVGSAQLLMSQKLQQFHGLCEQNLNQNANPQPTAQDLAGFWDMLQLSIEDISLKFDELYHLKTNDWQLVEMPEKKEEKKLPPPVPKKPAKGKTPLNREKLTDSVDKQRQEARKRLMAAKRAASVRQNSATESADSIEIYVPEAQTRL
SIO_010081: dlgap4
subclass of: SO_0000673
so part of: dlgap4
location: complement(join(85791..86009,88317..88469,93067..93158,95452..95851))
location: region:85791-95851:-1
so has part: feature:95452-95851:-1:exon
so has part: feature:93067-93158:-1:exon
so has part: feature:88317-88469:-1:exon
so has part: feature:85791-86009:-1:exon

XP_032897178.1
type: Protein
SIO_000068: ncbiprotein

position:95851:-1
position: 95851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95452-95851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93067-93158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88317-88469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85791-86009:-1:exon

dlgap4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dlgap4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 4 isoform X3
translation: MMSKQETDSDTQECSNATAGSQDISNQFSDSNQHHHISNSEPSVRQHAKSSQIKNKAFAYSDNLDPALDPSSLPPPEPWLESTTNLPVEPVHASSCCRDGYWFLKLLQAEKERMEGWCHQMEKETKENNLSEEVLGKIRSAVGSAQLLMSQKLQQFHGLCEQNLNQNANPQPTAQDLAGFWDMLQLSIEDISLKFDELYHLKTNDWQLVEMPEKKEEKKLPPPVPKKPAKGKTPLNREKLTDSVDKQRQEARKRLMAAKRAASVRQNSATESADSIEIYVPEAQTRL
SIO_010081: dlgap4
subclass of: SO_0000673
so part of: dlgap4
location: complement(join(85791..86009,88317..88469,93067..93158,95452..95851))
location: region:85791-95851:-1
so has part: feature:95452-95851:-1:exon
so has part: feature:93067-93158:-1:exon
so has part: feature:88317-88469:-1:exon
so has part: feature:85791-86009:-1:exon

XP_032897179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95452-95851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93067-93158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88317-88469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85791-86009:-1:exon

LOC116986079
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 425367..433006
location: region:425367-433006:1
so has part: feature:425367-433006:1:exon
subclass of: SO_0000011

116986079
type: Gene
SIO_000068: ncbigene

position:425367:1
position: 425367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433006:1
position: 433006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425367-433006:1:exon

LOC116986079
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116986079
product: uncharacterized LOC116986079
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004415401.1
SIO_010081: LOC116986079
subclass of: SO_0000673
so part of: LOC116986079
location: join(425367..425464,427442..427444,432996..433006)
location: region:425367-433006:1
so has part: feature:425367-425464:1:exon
so has part: feature:427442-427444:1:exon
so has part: feature:432996-433006:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425367-425464:1:exon

position:425464:1
position: 425464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:427442-427444:1:exon

position:427442:1
position: 427442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427444:1
position: 427444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:432996-433006:1:exon

position:432996:1
position: 432996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

aar2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: aar2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(481261..488200)
location: region:481261-488200:-1
so has part: feature:481261-488200:-1:exon
subclass of: SO_0000010

116986124
type: Gene
SIO_000068: ncbigene

position:481261:-1
position: 481261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488200:-1
position: 488200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481261-488200:-1:exon

aar2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: aar2
product: AAR2 splicing factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033041290.1
SIO_010081: aar2
subclass of: SO_0000673
so part of: aar2
location: complement(join(481261..481638,483784..484013,485521..486293,488101..488200))
location: region:481261-488200:-1
so has part: feature:488101-488200:-1:exon
so has part: feature:485521-486293:-1:exon
so has part: feature:483784-484013:-1:exon
so has part: feature:481261-481638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:488101-488200:-1:exon

position:488101:-1
position: 488101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:485521-486293:-1:exon

position:485521:-1
position: 485521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486293:-1
position: 486293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:483784-484013:-1:exon

position:483784:-1
position: 483784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484013:-1
position: 484013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:481261-481638:-1:exon

position:481638:-1
position: 481638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

aar2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: aar2
product: AAR2 splicing factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033041291.1
SIO_010081: aar2
subclass of: SO_0000673
so part of: aar2
location: complement(join(481261..481638,483784..484013,485521..486293,488136..488156))
location: region:481261-488156:-1
so has part: feature:488136-488156:-1:exon
so has part: feature:485521-486293:-1:exon
so has part: feature:483784-484013:-1:exon
so has part: feature:481261-481638:-1:exon

position:488156:-1
position: 488156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488136-488156:-1:exon

position:488136:-1
position: 488136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:485521-486293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:483784-484013:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481261-481638:-1:exon

aar2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: aar2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AAR2 homolog
translation: MATVEMDQELAKKLFFEGGTLIILAVPEGTEFGIDYNCWQVGPKFKGVKMIPPGIHFLHCSAVNDRGGQVTGPRTGCFFHIRPKEILVKRWDKREEEIIHVEVSEEELDRIRDSLRELDSWLGPYPYETLKRWVSLTNLVTDPLVQRLQPESGKISAFSEVEPELIVPHTKDRAEQNLLPYDTLCKSYEEGLARLPKMKIKPGTEIRFSKIPIRKYPEGASPAEITKCNMDFSYALDSVIDQRYPANPKDILGELQFSFVCFLIGSVYDAFEHWKDLLRLLCHAEEAVRKRTDLYTALITVLYHQLNQIPADFFVDIVSKDNFLTTTLQEFFSYTCGPDVDKTLQKRVEKFKDHLTKKFKWDFDMEPDDCAPVMVEMPDGVVLD
SIO_010081: aar2
subclass of: SO_0000673
so part of: aar2
location: complement(join(481471..481638,483784..484013,485521..486277))
location: region:481471-486277:-1
so has part: feature:485521-486277:-1:exon
so has part: feature:483784-484013:-1:exon
so has part: feature:481471-481638:-1:exon

XP_032897181.1
type: Protein
SIO_000068: ncbiprotein

position:481471:-1
position: 481471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486277:-1
position: 486277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485521-486277:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:483784-484013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481471-481638:-1:exon

aar2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: aar2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AAR2 homolog
translation: MATVEMDQELAKKLFFEGGTLIILAVPEGTEFGIDYNCWQVGPKFKGVKMIPPGIHFLHCSAVNDRGGQVTGPRTGCFFHIRPKEILVKRWDKREEEIIHVEVSEEELDRIRDSLRELDSWLGPYPYETLKRWVSLTNLVTDPLVQRLQPESGKISAFSEVEPELIVPHTKDRAEQNLLPYDTLCKSYEEGLARLPKMKIKPGTEIRFSKIPIRKYPEGASPAEITKCNMDFSYALDSVIDQRYPANPKDILGELQFSFVCFLIGSVYDAFEHWKDLLRLLCHAEEAVRKRTDLYTALITVLYHQLNQIPADFFVDIVSKDNFLTTTLQEFFSYTCGPDVDKTLQKRVEKFKDHLTKKFKWDFDMEPDDCAPVMVEMPDGVVLD
SIO_010081: aar2
subclass of: SO_0000673
so part of: aar2
location: complement(join(481471..481638,483784..484013,485521..486277))
location: region:481471-486277:-1
so has part: feature:485521-486277:-1:exon
so has part: feature:483784-484013:-1:exon
so has part: feature:481471-481638:-1:exon

XP_032897182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485521-486277:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:483784-484013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481471-481638:-1:exon

epb41l1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: epb41l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(495886..648684)
location: region:495886-648684:-1
so has part: feature:495886-648684:-1:exon
subclass of: SO_0000010

116986125
type: Gene
SIO_000068: ncbigene

position:495886:-1
position: 495886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648684:-1
position: 648684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495886-648684:-1:exon

epb41l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: epb41l1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033041293.1
SIO_010081: epb41l1
subclass of: SO_0000673
so part of: epb41l1
location: complement(join(495886..497293,499698..499814,502574..502654,504379..504465,504567..504647,505994..506110,508218..508646,509093..509227,518817..518996,522578..522762,524081..524256,529338..529435,540697..540849,542676..542763,544055..544273,548609..548684,551705..551747,555632..555736,575945..576145,578673..578827,648564..648684))
location: region:495886-648684:-1
so has part: feature:648564-648684:-1:exon
so has part: feature:578673-578827:-1:exon
so has part: feature:575945-576145:-1:exon
so has part: feature:555632-555736:-1:exon
so has part: feature:551705-551747:-1:exon
so has part: feature:548609-548684:-1:exon
so has part: feature:544055-544273:-1:exon
so has part: feature:542676-542763:-1:exon
so has part: feature:540697-540849:-1:exon
so has part: feature:529338-529435:-1:exon
so has part: feature:524081-524256:-1:exon
so has part: feature:522578-522762:-1:exon
so has part: feature:518817-518996:-1:exon
so has part: feature:509093-509227:-1:exon
so has part: feature:508218-508646:-1:exon
so has part: feature:505994-506110:-1:exon
so has part: feature:504567-504647:-1:exon
so has part: feature:504379-504465:-1:exon
so has part: feature:502574-502654:-1:exon
so has part: feature:499698-499814:-1:exon
so has part: feature:495886-497293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:648564-648684:-1:exon

position:648564:-1
position: 648564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:578673-578827:-1:exon

position:578673:-1
position: 578673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578827:-1
position: 578827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:575945-576145:-1:exon

position:575945:-1
position: 575945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576145:-1
position: 576145
reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:555632-555736:-1:exon

position:555632:-1
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reference: sequence
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position:555736:-1
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urn:…
SIO_000300: 5
SIO_000628: feature:551705-551747:-1:exon

position:551705:-1
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reference: sequence
type: ReverseStrandPosition
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position:551747:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:548609-548684:-1:exon

position:548609:-1
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urn:…
SIO_000300: 7
SIO_000628: feature:544055-544273:-1:exon

position:544055:-1
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reference: sequence
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position:544273:-1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:542676-542763:-1:exon

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reference: sequence
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position:542763:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:540697-540849:-1:exon

position:540697:-1
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reference: sequence
type: ReverseStrandPosition
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position:540849:-1
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urn:…
SIO_000300: 10
SIO_000628: feature:529338-529435:-1:exon

position:529338:-1
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reference: sequence
type: ReverseStrandPosition
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position:529435:-1
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urn:…
SIO_000300: 11
SIO_000628: feature:524081-524256:-1:exon

position:524081:-1
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reference: sequence
type: ReverseStrandPosition
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position:524256:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:522578-522762:-1:exon

position:522578:-1
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reference: sequence
type: ReverseStrandPosition
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position:522762:-1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:518817-518996:-1:exon

position:518817:-1
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reference: sequence
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position:518996:-1
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urn:…
SIO_000300: 14
SIO_000628: feature:509093-509227:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:509227:-1
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:508218-508646:-1:exon

position:508218:-1
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reference: sequence
type: ReverseStrandPosition
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position:508646:-1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:505994-506110:-1:exon

position:505994:-1
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reference: sequence
type: ReverseStrandPosition
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position:506110:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:504567-504647:-1:exon

position:504567:-1
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reference: sequence
type: ReverseStrandPosition
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position:504647:-1
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:504379-504465:-1:exon

position:504379:-1
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reference: sequence
type: ReverseStrandPosition
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position:504465:-1
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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:502574-502654:-1:exon

position:502574:-1
position: 502574
reference: sequence
type: ReverseStrandPosition
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position:502654:-1
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:499698-499814:-1:exon

position:499698:-1
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reference: sequence
type: ReverseStrandPosition
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position:499814:-1
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:495886-497293:-1:exon

position:497293:-1
position: 497293
reference: sequence
type: ReverseStrandPosition
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epb41l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: epb41l1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033041295.1
SIO_010081: epb41l1
subclass of: SO_0000673
so part of: epb41l1
location: complement(join(495886..497293,499698..499814,502574..502654,504379..504465,504567..504647,505994..506110,509093..509227,518817..518996,520597..520632,522578..522762,524081..524256,529338..529435,540697..540849,542676..542763,544055..544273,548609..548684,551705..551747,555632..555736,575945..576145,578673..578827,648564..648684))
location: region:495886-648684:-1
so has part: feature:648564-648684:-1:exon
so has part: feature:578673-578827:-1:exon
so has part: feature:575945-576145:-1:exon
so has part: feature:555632-555736:-1:exon
so has part: feature:551705-551747:-1:exon
so has part: feature:548609-548684:-1:exon
so has part: feature:544055-544273:-1:exon
so has part: feature:542676-542763:-1:exon
so has part: feature:540697-540849:-1:exon
so has part: feature:529338-529435:-1:exon
so has part: feature:524081-524256:-1:exon
so has part: feature:522578-522762:-1:exon
so has part: feature:520597-520632:-1:exon
so has part: feature:518817-518996:-1:exon
so has part: feature:509093-509227:-1:exon
so has part: feature:505994-506110:-1:exon
so has part: feature:504567-504647:-1:exon
so has part: feature:504379-504465:-1:exon
so has part: feature:502574-502654:-1:exon
so has part: feature:499698-499814:-1:exon
so has part: feature:495886-497293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:648564-648684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:578673-578827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:575945-576145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555632-555736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551705-551747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548609-548684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544055-544273:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542676-542763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:540697-540849:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:529338-529435:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:524081-524256:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:522578-522762:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:520597-520632:-1:exon

position:520597:-1
position: 520597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520632:-1
position: 520632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:518817-518996:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:509093-509227:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:505994-506110:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:504567-504647:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:504379-504465:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:502574-502654:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:499698-499814:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:495886-497293:-1:exon

epb41l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: epb41l1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033041294.1
SIO_010081: epb41l1
subclass of: SO_0000673
so part of: epb41l1
location: complement(join(495886..497293,499698..499814,502574..502654,504379..504465,504567..504647,505994..506110,508218..508342,508379..508646,509093..509227,518817..518996,520597..520632,522578..522762,524081..524256,529338..529435,540697..540849,542676..542763,544055..544273,548609..548684,551705..551747,555632..555736,575945..576145,578673..578827,648564..648684))
location: region:495886-648684:-1
so has part: feature:648564-648684:-1:exon
so has part: feature:578673-578827:-1:exon
so has part: feature:575945-576145:-1:exon
so has part: feature:555632-555736:-1:exon
so has part: feature:551705-551747:-1:exon
so has part: feature:548609-548684:-1:exon
so has part: feature:544055-544273:-1:exon
so has part: feature:542676-542763:-1:exon
so has part: feature:540697-540849:-1:exon
so has part: feature:529338-529435:-1:exon
so has part: feature:524081-524256:-1:exon
so has part: feature:522578-522762:-1:exon
so has part: feature:520597-520632:-1:exon
so has part: feature:518817-518996:-1:exon
so has part: feature:509093-509227:-1:exon
so has part: feature:508379-508646:-1:exon
so has part: feature:508218-508342:-1:exon
so has part: feature:505994-506110:-1:exon
so has part: feature:504567-504647:-1:exon
so has part: feature:504379-504465:-1:exon
so has part: feature:502574-502654:-1:exon
so has part: feature:499698-499814:-1:exon
so has part: feature:495886-497293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:648564-648684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:578673-578827:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:555632-555736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551705-551747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548609-548684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544055-544273:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542676-542763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:540697-540849:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:529338-529435:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:524081-524256:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:522578-522762:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:520597-520632:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:518817-518996:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:509093-509227:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:508379-508646:-1:exon

position:508379:-1
position: 508379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:508218-508342:-1:exon

position:508342:-1
position: 508342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:505994-506110:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:504567-504647:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:504379-504465:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:502574-502654:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:499698-499814:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:495886-497293:-1:exon

epb41l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: epb41l1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033041292.1
SIO_010081: epb41l1
subclass of: SO_0000673
so part of: epb41l1
location: complement(join(495886..497293,499698..499814,502574..502654,504379..504465,504567..504647,505994..506110,508218..508646,509093..509227,518817..518996,520597..520632,522578..522762,524081..524256,529338..529435,540697..540849,542676..542763,544055..544273,548609..548684,551705..551747,555632..555736,575945..576145,578673..578827,648564..648684))
location: region:495886-648684:-1
so has part: feature:648564-648684:-1:exon
so has part: feature:578673-578827:-1:exon
so has part: feature:575945-576145:-1:exon
so has part: feature:555632-555736:-1:exon
so has part: feature:551705-551747:-1:exon
so has part: feature:548609-548684:-1:exon
so has part: feature:544055-544273:-1:exon
so has part: feature:542676-542763:-1:exon
so has part: feature:540697-540849:-1:exon
so has part: feature:529338-529435:-1:exon
so has part: feature:524081-524256:-1:exon
so has part: feature:522578-522762:-1:exon
so has part: feature:520597-520632:-1:exon
so has part: feature:518817-518996:-1:exon
so has part: feature:509093-509227:-1:exon
so has part: feature:508218-508646:-1:exon
so has part: feature:505994-506110:-1:exon
so has part: feature:504567-504647:-1:exon
so has part: feature:504379-504465:-1:exon
so has part: feature:502574-502654:-1:exon
so has part: feature:499698-499814:-1:exon
so has part: feature:495886-497293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:648564-648684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:578673-578827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:575945-576145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555632-555736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551705-551747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548609-548684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544055-544273:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542676-542763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:540697-540849:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:529338-529435:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:524081-524256:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:522578-522762:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:520597-520632:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:518817-518996:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:509093-509227:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:508218-508646:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:505994-506110:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:504567-504647:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:504379-504465:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:502574-502654:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:499698-499814:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:495886-497293:-1:exon

epb41l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: epb41l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X2
translation: MTTECVADPELTNVEQRSPVEEQPLVQPEMADNREQLHNEPNNKQEQNSEKDQKAESIPRVEEPDAGETDEDKTSERTTPGRTPKSPMKGSKKQKAMGCKVTLLDGTEFECEVEKRAKGQLLFDLVCEHLNLLEKDYYGLTFCDSDSQKNWLDPSKDIKKQIRSGPWHLAFTVKFYPPDPTELSEDITRYYLCLQLRDDIISGRLPCSFVTHALLGSYTVQAELGDYDPEEHGPDYVTEIRFAPNQTKELEERVVELHKSYRGLTPGEAEMNFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRAAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASSLIDRPAPYFDRSSSKRYTMSRSLDGEFFRPASVGENHEGLLKELINNTSETSRTETPDTIQSDSKKSSQKSEKADEVTTPTKIKEMKFLDKPEDVLMKHQANINELKRTLQESTSIKINHSDRERKLTTSPSKAKDKELEGLEKLVESKPAHEASGEDKDTKPPREASRSPGRSSVKGHVSEDAVVTVLPPQSTEARLDLKRGSVLAAQESEEAMEQMQELAAQSVVVDLLHPSDHTNSAPPAEGQVLSAPEGTDGQVEEKLPTQTKVTKPEGSDSTVSETSTPSTKSTPSTESTPSTKSTPSTKSTDKQPTPEDGADQHNGQEAEDSQAKPQLEDVQKATAGLPSDVPTGPMGTSSKETVVPLDIKTPTKTTQMNNSPDSGHEVVTRSESVEPETPPVPAVDGGAVAVSGSQSVTSETISTSTTTHITKSVKGGFSETRIEKRIIITGDADVDQDQALALAIKEVRQQHPDMLVTKAVVYKESETESEQNTKEPKE
SIO_010081: epb41l1
subclass of: SO_0000673
so part of: epb41l1
location: complement(join(497288..497293,499698..499814,502574..502654,504379..504465,504567..504647,505994..506110,508218..508646,509093..509227,518817..518996,522578..522762,524081..524256,529338..529435,540697..540849,542676..542763,544055..544273,548609..548684,551705..551747,555632..555736,575945..576145,578673..578813))
location: region:497288-578813:-1
so has part: feature:578673-578813:-1:exon
so has part: feature:575945-576145:-1:exon
so has part: feature:555632-555736:-1:exon
so has part: feature:551705-551747:-1:exon
so has part: feature:548609-548684:-1:exon
so has part: feature:544055-544273:-1:exon
so has part: feature:542676-542763:-1:exon
so has part: feature:540697-540849:-1:exon
so has part: feature:529338-529435:-1:exon
so has part: feature:524081-524256:-1:exon
so has part: feature:522578-522762:-1:exon
so has part: feature:518817-518996:-1:exon
so has part: feature:509093-509227:-1:exon
so has part: feature:508218-508646:-1:exon
so has part: feature:505994-506110:-1:exon
so has part: feature:504567-504647:-1:exon
so has part: feature:504379-504465:-1:exon
so has part: feature:502574-502654:-1:exon
so has part: feature:499698-499814:-1:exon
so has part: feature:497288-497293:-1:exon

XP_032897184.1
type: Protein
SIO_000068: ncbiprotein

position:497288:-1
position: 497288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578813:-1
position: 578813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578673-578813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575945-576145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555632-555736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551705-551747:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548609-548684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544055-544273:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542676-542763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540697-540849:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:529338-529435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:524081-524256:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:522578-522762:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:518817-518996:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:509093-509227:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:508218-508646:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:505994-506110:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:504567-504647:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:504379-504465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:502574-502654:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:499698-499814:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:497288-497293:-1:exon

epb41l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: epb41l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X4
translation: MTTECVADPELTNVEQRSPVEEQPLVQPEMADNREQLHNEPNNKQEQNSEKDQKAESIPRVEEPDAGETDEDKTSERTTPGRTPKSPMKGSKKQKAMGCKVTLLDGTEFECEVEKRAKGQLLFDLVCEHLNLLEKDYYGLTFCDSDSQKNWLDPSKDIKKQIRSGPWHLAFTVKFYPPDPTELSEDITRYYLCLQLRDDIISGRLPCSFVTHALLGSYTVQAELGDYDPEEHGPDYVTEIRFAPNQTKELEERVVELHKSYRGLTPGEAEMNFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRAAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASSLIDRPAPYFDRSSSKRYTMSRSLDGEFFRPASVGENHEGLLKELINNTSETSRTETPDTIQSDSKKSSQKSEKADEVTTPTKIKEMKMEREDEPRLRQEFLDKPEDVLMKHQANINELKRTLQESTSIKINHSDRERKLTTSPSKAKDKELEGLEKLVESKPAHEASGEDKDTKPPREASRSPGRSSVKGHVSEDAVVTVLPPQDVQKATAGLPSDVPTGPMGTSSKETVVPLDIKTPTKTTQMNNSPDSGHEVVTRSESVEPETPPVPAVDGGAVAVSGSQSVTSETISTSTTTHITKSVKGGFSETRIEKRIIITGDADVDQDQALALAIKEVRQQHPDMLVTKAVVYKESETESEQNTKEPKE
SIO_010081: epb41l1
subclass of: SO_0000673
so part of: epb41l1
location: complement(join(497288..497293,499698..499814,502574..502654,504379..504465,504567..504647,505994..506110,509093..509227,518817..518996,520597..520632,522578..522762,524081..524256,529338..529435,540697..540849,542676..542763,544055..544273,548609..548684,551705..551747,555632..555736,575945..576145,578673..578813))
location: region:497288-578813:-1
so has part: feature:578673-578813:-1:exon
so has part: feature:575945-576145:-1:exon
so has part: feature:555632-555736:-1:exon
so has part: feature:551705-551747:-1:exon
so has part: feature:548609-548684:-1:exon
so has part: feature:544055-544273:-1:exon
so has part: feature:542676-542763:-1:exon
so has part: feature:540697-540849:-1:exon
so has part: feature:529338-529435:-1:exon
so has part: feature:524081-524256:-1:exon
so has part: feature:522578-522762:-1:exon
so has part: feature:520597-520632:-1:exon
so has part: feature:518817-518996:-1:exon
so has part: feature:509093-509227:-1:exon
so has part: feature:505994-506110:-1:exon
so has part: feature:504567-504647:-1:exon
so has part: feature:504379-504465:-1:exon
so has part: feature:502574-502654:-1:exon
so has part: feature:499698-499814:-1:exon
so has part: feature:497288-497293:-1:exon

XP_032897186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578673-578813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575945-576145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555632-555736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551705-551747:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548609-548684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544055-544273:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542676-542763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540697-540849:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:529338-529435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:524081-524256:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:522578-522762:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:520597-520632:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:518817-518996:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:509093-509227:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:505994-506110:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:504567-504647:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:504379-504465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:502574-502654:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:499698-499814:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:497288-497293:-1:exon

epb41l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: epb41l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X3
translation: MTTECVADPELTNVEQRSPVEEQPLVQPEMADNREQLHNEPNNKQEQNSEKDQKAESIPRVEEPDAGETDEDKTSERTTPGRTPKSPMKGSKKQKAMGCKVTLLDGTEFECEVEKRAKGQLLFDLVCEHLNLLEKDYYGLTFCDSDSQKNWLDPSKDIKKQIRSGPWHLAFTVKFYPPDPTELSEDITRYYLCLQLRDDIISGRLPCSFVTHALLGSYTVQAELGDYDPEEHGPDYVTEIRFAPNQTKELEERVVELHKSYRGLTPGEAEMNFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRAAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASSLIDRPAPYFDRSSSKRYTMSRSLDGEFFRPASVGENHEGLLKELINNTSETSRTETPDTIQSDSKKSSQKSEKADEVTTPTKIKEMKMEREDEPRLRQEFLDKPEDVLMKHQANINELKRTLQESTSIKINHSDRERKLTTSPSKAKDKELEGLEKLVESKPAHEASGEDKDTKPPREASRSPGRSSVKGHVSEDAVVTVLPPQSTEARLDLKRGSVLAAQESEEAMEQMQELAAQSVVVDLLHPSDHTNSAPPAEGQVLSAPEGTDGQVEEKLPTQTKVTKPEGSDSTVSETSTPSTKSTPSTKSTDKQPTPEDGADQHNGQEAEDSQAKPQLEDVQKATAGLPSDVPTGPMGTSSKETVVPLDIKTPTKTTQMNNSPDSGHEVVTRSESVEPETPPVPAVDGGAVAVSGSQSVTSETISTSTTTHITKSVKGGFSETRIEKRIIITGDADVDQDQALALAIKEVRQQHPDMLVTKAVVYKESETESEQNTKEPKE
SIO_010081: epb41l1
subclass of: SO_0000673
so part of: epb41l1
location: complement(join(497288..497293,499698..499814,502574..502654,504379..504465,504567..504647,505994..506110,508218..508342,508379..508646,509093..509227,518817..518996,520597..520632,522578..522762,524081..524256,529338..529435,540697..540849,542676..542763,544055..544273,548609..548684,551705..551747,555632..555736,575945..576145,578673..578813))
location: region:497288-578813:-1
so has part: feature:578673-578813:-1:exon
so has part: feature:575945-576145:-1:exon
so has part: feature:555632-555736:-1:exon
so has part: feature:551705-551747:-1:exon
so has part: feature:548609-548684:-1:exon
so has part: feature:544055-544273:-1:exon
so has part: feature:542676-542763:-1:exon
so has part: feature:540697-540849:-1:exon
so has part: feature:529338-529435:-1:exon
so has part: feature:524081-524256:-1:exon
so has part: feature:522578-522762:-1:exon
so has part: feature:520597-520632:-1:exon
so has part: feature:518817-518996:-1:exon
so has part: feature:509093-509227:-1:exon
so has part: feature:508379-508646:-1:exon
so has part: feature:508218-508342:-1:exon
so has part: feature:505994-506110:-1:exon
so has part: feature:504567-504647:-1:exon
so has part: feature:504379-504465:-1:exon
so has part: feature:502574-502654:-1:exon
so has part: feature:499698-499814:-1:exon
so has part: feature:497288-497293:-1:exon

XP_032897185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578673-578813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575945-576145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555632-555736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551705-551747:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548609-548684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544055-544273:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542676-542763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540697-540849:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:529338-529435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:524081-524256:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:522578-522762:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:520597-520632:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:518817-518996:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:509093-509227:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:508379-508646:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:508218-508342:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:505994-506110:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:504567-504647:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:504379-504465:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:502574-502654:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:499698-499814:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:497288-497293:-1:exon

epb41l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: epb41l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X1
translation: MTTECVADPELTNVEQRSPVEEQPLVQPEMADNREQLHNEPNNKQEQNSEKDQKAESIPRVEEPDAGETDEDKTSERTTPGRTPKSPMKGSKKQKAMGCKVTLLDGTEFECEVEKRAKGQLLFDLVCEHLNLLEKDYYGLTFCDSDSQKNWLDPSKDIKKQIRSGPWHLAFTVKFYPPDPTELSEDITRYYLCLQLRDDIISGRLPCSFVTHALLGSYTVQAELGDYDPEEHGPDYVTEIRFAPNQTKELEERVVELHKSYRGLTPGEAEMNFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRAAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASSLIDRPAPYFDRSSSKRYTMSRSLDGEFFRPASVGENHEGLLKELINNTSETSRTETPDTIQSDSKKSSQKSEKADEVTTPTKIKEMKMEREDEPRLRQEFLDKPEDVLMKHQANINELKRTLQESTSIKINHSDRERKLTTSPSKAKDKELEGLEKLVESKPAHEASGEDKDTKPPREASRSPGRSSVKGHVSEDAVVTVLPPQSTEARLDLKRGSVLAAQESEEAMEQMQELAAQSVVVDLLHPSDHTNSAPPAEGQVLSAPEGTDGQVEEKLPTQTKVTKPEGSDSTVSETSTPSTKSTPSTESTPSTKSTPSTKSTDKQPTPEDGADQHNGQEAEDSQAKPQLEDVQKATAGLPSDVPTGPMGTSSKETVVPLDIKTPTKTTQMNNSPDSGHEVVTRSESVEPETPPVPAVDGGAVAVSGSQSVTSETISTSTTTHITKSVKGGFSETRIEKRIIITGDADVDQDQALALAIKEVRQQHPDMLVTKAVVYKESETESEQNTKEPKE
SIO_010081: epb41l1
subclass of: SO_0000673
so part of: epb41l1
location: complement(join(497288..497293,499698..499814,502574..502654,504379..504465,504567..504647,505994..506110,508218..508646,509093..509227,518817..518996,520597..520632,522578..522762,524081..524256,529338..529435,540697..540849,542676..542763,544055..544273,548609..548684,551705..551747,555632..555736,575945..576145,578673..578813))
location: region:497288-578813:-1
so has part: feature:578673-578813:-1:exon
so has part: feature:575945-576145:-1:exon
so has part: feature:555632-555736:-1:exon
so has part: feature:551705-551747:-1:exon
so has part: feature:548609-548684:-1:exon
so has part: feature:544055-544273:-1:exon
so has part: feature:542676-542763:-1:exon
so has part: feature:540697-540849:-1:exon
so has part: feature:529338-529435:-1:exon
so has part: feature:524081-524256:-1:exon
so has part: feature:522578-522762:-1:exon
so has part: feature:520597-520632:-1:exon
so has part: feature:518817-518996:-1:exon
so has part: feature:509093-509227:-1:exon
so has part: feature:508218-508646:-1:exon
so has part: feature:505994-506110:-1:exon
so has part: feature:504567-504647:-1:exon
so has part: feature:504379-504465:-1:exon
so has part: feature:502574-502654:-1:exon
so has part: feature:499698-499814:-1:exon
so has part: feature:497288-497293:-1:exon

XP_032897183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:578673-578813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575945-576145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555632-555736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551705-551747:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548609-548684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544055-544273:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542676-542763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540697-540849:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:529338-529435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:524081-524256:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:522578-522762:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:520597-520632:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:518817-518996:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:509093-509227:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:508218-508646:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:505994-506110:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:504567-504647:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:504379-504465:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:502574-502654:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:499698-499814:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:497288-497293:-1:exon

LOC116986129
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986129
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(704148..722731)
location: region:704148-722731:-1
so has part: feature:704148-722731:-1:exon
subclass of: SO_0000011

116986129
type: Gene
SIO_000068: ncbigene

position:704148:-1
position: 704148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722731:-1
position: 722731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704148-722731:-1:exon

LOC116986129
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116986129
product: uncharacterized LOC116986129
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004415425.1
SIO_010081: LOC116986129
subclass of: SO_0000673
so part of: LOC116986129
location: complement(join(704148..704160,705390..705398,722425..722731))
location: region:704148-722731:-1
so has part: feature:722425-722731:-1:exon
so has part: feature:705390-705398:-1:exon
so has part: feature:704148-704160:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:722425-722731:-1:exon

position:722425:-1
position: 722425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:705390-705398:-1:exon

position:705390:-1
position: 705390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705398:-1
position: 705398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:704148-704160:-1:exon

position:704160:-1
position: 704160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

srsf6
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: srsf6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 704673..715436
location: region:704673-715436:1
so has part: feature:704673-715436:1:exon
subclass of: SO_0000010

116986128
type: Gene
SIO_000068: ncbigene

position:704673:1
position: 704673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:715436:1
position: 715436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704673-715436:1:exon

srsf6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: srsf6
product: serine and arginine rich splicing factor 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033041300.1
SIO_010081: srsf6
subclass of: SO_0000673
so part of: srsf6
location: join(704673..704847,706742..706938,707517..707635,707728..707930,709882..709977,714258..715436)
location: region:704673-715436:1
so has part: feature:704673-704847:1:exon
so has part: feature:706742-706938:1:exon
so has part: feature:707517-707635:1:exon
so has part: feature:707728-707930:1:exon
so has part: feature:709882-709977:1:exon
so has part: feature:714258-715436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:704673-704847:1:exon

position:704847:1
position: 704847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:706742-706938:1:exon

position:706742:1
position: 706742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706938:1
position: 706938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:707517-707635:1:exon

position:707517:1
position: 707517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707635:1
position: 707635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:707728-707930:1:exon

position:707728:1
position: 707728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707930:1
position: 707930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:709882-709977:1:exon

position:709882:1
position: 709882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709977:1
position: 709977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:714258-715436:1:exon

position:714258:1
position: 714258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

srsf6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: srsf6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 6
translation: MPRVYVGRLSYQVREKDLERFFKGYGKLLEVDLKNGYGFVEFEDSRDADDAVYEQNGKELCGERIIVEHARGPRRDGSYGGGGYGGGGGGGGGGGGGGGGRSSSGYGYRRNGREKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKQRMNEGVIEFRSYSDMKRALDKLDGSEINARKIRLVEDRPRNRRSSSGSRSRSRSRSRRHSRSRSRRSTRSRSGTASKSRSRSQSRGKGHSRSKSKTPERKSRSRSNSKVKSDHGSRSPSPSKSKSDLNKKSKSRSKSPQVNGNGENKSISRSRSKSRSRSREASVPVSPVKSKPKSENLSPSNSRRSMSRSMSRSRSGSKE
SIO_010081: srsf6
subclass of: SO_0000673
so part of: srsf6
location: join(704741..704847,706742..706938,707517..707635,707728..707930,709882..709977,714258..714615)
location: region:704741-714615:1
so has part: feature:704741-704847:1:exon
so has part: feature:706742-706938:1:exon
so has part: feature:707517-707635:1:exon
so has part: feature:707728-707930:1:exon
so has part: feature:709882-709977:1:exon
so has part: feature:714258-714615:1:exon

XP_032897191.1
type: Protein
SIO_000068: ncbiprotein

position:704741:1
position: 704741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714615:1
position: 714615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704741-704847:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706742-706938:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:707517-707635:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:707728-707930:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709882-709977:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:714258-714615:1:exon

l3mbtl1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: l3mbtl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 717537..764606
location: region:717537-764606:1
so has part: feature:717537-764606:1:exon
subclass of: SO_0000010

116986127
type: Gene
SIO_000068: ncbigene

position:717537:1
position: 717537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764606:1
position: 764606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717537-764606:1:exon

l3mbtl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: l3mbtl1
product: L3MBTL histone methyl-lysine binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033041296.1
SIO_010081: l3mbtl1
subclass of: SO_0000673
so part of: l3mbtl1
location: join(717537..718211,722699..722864,723744..723943,724457..724610,728335..728479,731218..731368,732928..733042,736693..736787,737388..737492,738459..738594,739752..739843,741180..741331,744330..744406,745197..745282,745374..745484,749599..749713,750685..750787,751660..751857,754379..754440,756073..756170,761430..761492,763392..764606)
location: region:717537-764606:1
so has part: feature:717537-718211:1:exon
so has part: feature:722699-722864:1:exon
so has part: feature:723744-723943:1:exon
so has part: feature:724457-724610:1:exon
so has part: feature:728335-728479:1:exon
so has part: feature:731218-731368:1:exon
so has part: feature:732928-733042:1:exon
so has part: feature:736693-736787:1:exon
so has part: feature:737388-737492:1:exon
so has part: feature:738459-738594:1:exon
so has part: feature:739752-739843:1:exon
so has part: feature:741180-741331:1:exon
so has part: feature:744330-744406:1:exon
so has part: feature:745197-745282:1:exon
so has part: feature:745374-745484:1:exon
so has part: feature:749599-749713:1:exon
so has part: feature:750685-750787:1:exon
so has part: feature:751660-751857:1:exon
so has part: feature:754379-754440:1:exon
so has part: feature:756073-756170:1:exon
so has part: feature:761430-761492:1:exon
so has part: feature:763392-764606:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:717537-718211:1:exon

position:718211:1
position: 718211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:722699-722864:1:exon

position:722699:1
position: 722699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722864:1
position: 722864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:723744-723943:1:exon

position:723744:1
position: 723744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723943:1
position: 723943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:724457-724610:1:exon

position:724457:1
position: 724457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724610:1
position: 724610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:728335-728479:1:exon

position:728335:1
position: 728335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728479:1
position: 728479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:731218-731368:1:exon

position:731218:1
position: 731218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731368:1
position: 731368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:732928-733042:1:exon

position:732928:1
position: 732928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733042:1
position: 733042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:736693-736787:1:exon

position:736693:1
position: 736693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736787:1
position: 736787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:737388-737492:1:exon

position:737388:1
position: 737388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737492:1
position: 737492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:738459-738594:1:exon

position:738459:1
position: 738459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738594:1
position: 738594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:739752-739843:1:exon

position:739752:1
position: 739752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739843:1
position: 739843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:741180-741331:1:exon

position:741180:1
position: 741180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741331:1
position: 741331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:744330-744406:1:exon

position:744330:1
position: 744330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744406:1
position: 744406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:745197-745282:1:exon

position:745197:1
position: 745197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745282:1
position: 745282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:745374-745484:1:exon

position:745374:1
position: 745374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745484:1
position: 745484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:749599-749713:1:exon

position:749599:1
position: 749599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749713:1
position: 749713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:750685-750787:1:exon

position:750685:1
position: 750685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750787:1
position: 750787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:751660-751857:1:exon

position:751660:1
position: 751660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751857:1
position: 751857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:754379-754440:1:exon

position:754379:1
position: 754379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754440:1
position: 754440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:756073-756170:1:exon

position:756073:1
position: 756073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756170:1
position: 756170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:761430-761492:1:exon

position:761430:1
position: 761430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761492:1
position: 761492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:763392-764606:1:exon

position:763392:1
position: 763392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

l3mbtl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: l3mbtl1
product: L3MBTL histone methyl-lysine binding protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033041298.1
SIO_010081: l3mbtl1
subclass of: SO_0000673
so part of: l3mbtl1
location: join(717537..718211,722699..722864,723744..723943,724457..724610,728335..728479,731218..731368,732928..733042,736693..736787,737388..737492,738459..738594,739752..739843,741180..741331,744330..744406,745197..745282,745374..745484,749599..749713,750685..750787,754379..754440,756073..756170,761430..761492,763392..764606)
location: region:717537-764606:1
so has part: feature:717537-718211:1:exon
so has part: feature:722699-722864:1:exon
so has part: feature:723744-723943:1:exon
so has part: feature:724457-724610:1:exon
so has part: feature:728335-728479:1:exon
so has part: feature:731218-731368:1:exon
so has part: feature:732928-733042:1:exon
so has part: feature:736693-736787:1:exon
so has part: feature:737388-737492:1:exon
so has part: feature:738459-738594:1:exon
so has part: feature:739752-739843:1:exon
so has part: feature:741180-741331:1:exon
so has part: feature:744330-744406:1:exon
so has part: feature:745197-745282:1:exon
so has part: feature:745374-745484:1:exon
so has part: feature:749599-749713:1:exon
so has part: feature:750685-750787:1:exon
so has part: feature:754379-754440:1:exon
so has part: feature:756073-756170:1:exon
so has part: feature:761430-761492:1:exon
so has part: feature:763392-764606:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:717537-718211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:722699-722864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723744-723943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724457-724610:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728335-728479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:731218-731368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:732928-733042:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:736693-736787:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:737388-737492:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:738459-738594:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:739752-739843:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:741180-741331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:744330-744406:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:745197-745282:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:745374-745484:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:749599-749713:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:750685-750787:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:754379-754440:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:756073-756170:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:761430-761492:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:763392-764606:1:exon

l3mbtl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: l3mbtl1
product: L3MBTL histone methyl-lysine binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033041297.1
SIO_010081: l3mbtl1
subclass of: SO_0000673
so part of: l3mbtl1
location: join(717537..718211,722699..722864,723744..723943,724457..724610,728335..728479,731221..731368,732928..733042,736693..736787,737388..737492,738459..738594,739752..739843,741180..741331,744330..744406,745197..745282,745374..745484,749599..749713,750685..750787,751660..751857,754379..754440,756073..756170,761430..761492,763392..764606)
location: region:717537-764606:1
so has part: feature:717537-718211:1:exon
so has part: feature:722699-722864:1:exon
so has part: feature:723744-723943:1:exon
so has part: feature:724457-724610:1:exon
so has part: feature:728335-728479:1:exon
so has part: feature:731221-731368:1:exon
so has part: feature:732928-733042:1:exon
so has part: feature:736693-736787:1:exon
so has part: feature:737388-737492:1:exon
so has part: feature:738459-738594:1:exon
so has part: feature:739752-739843:1:exon
so has part: feature:741180-741331:1:exon
so has part: feature:744330-744406:1:exon
so has part: feature:745197-745282:1:exon
so has part: feature:745374-745484:1:exon
so has part: feature:749599-749713:1:exon
so has part: feature:750685-750787:1:exon
so has part: feature:751660-751857:1:exon
so has part: feature:754379-754440:1:exon
so has part: feature:756073-756170:1:exon
so has part: feature:761430-761492:1:exon
so has part: feature:763392-764606:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:717537-718211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:722699-722864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723744-723943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724457-724610:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728335-728479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:731221-731368:1:exon

position:731221:1
position: 731221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:732928-733042:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:736693-736787:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:737388-737492:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:738459-738594:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:739752-739843:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:741180-741331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:744330-744406:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:745197-745282:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:745374-745484:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:749599-749713:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:750685-750787:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:751660-751857:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:754379-754440:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:756073-756170:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761430-761492:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:763392-764606:1:exon

l3mbtl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: l3mbtl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 1 isoform X1
translation: MYMKPSEIHVSELISLASPCLPDSTAILVQWQSEVIVFRMNSGVGLEDLPSDARPPSQGSLHEVTGNSLTQTTHLPTKAFIIPAANLRKPRSFSRESQTISLPVKAEPSDSPVPATATISPQISGAHNCDVVSVLEWKDGIATLPGSNLKFRLNEFGVLEVVGTEGIVTKSVTRISRVTTVEAVSDTCSEEAGWNATTAHQLKQMTVSYRREAMGRCRCCVNCGHTYMASEVRGSSRFCSDHCLHQFKDNRSLRMGNVAVKRSAGAILKRVKKRKRKVCLSPSSESNEEYGYESTELEQAEERNKDSTSVRGHLMDGNSYTDFRQRHPDQHSLTFPGQAVSVVGKNKLSSWALYLEEEKSLAAPVKLFREYQSYPLTRNAFKVGMKLEGIDPTHPSMYFVLTVFEVCGYRVRLHFDGYSEGHDFWVNADCPDIHPAGWCEKTGHRLYLPRGYKDEEFSWPSYLRVTKSQAAAKHLFISQNTAVLPLGFRVGMKLEAVDRMNPSLICVATVTDIVDSRFLVHFDNWDDTYDYWCDASSPYIHPVGWCQQHGKPLTPPQGYLQPEQFAWDRYLEETGSTAAPARAFKTRPPHTFQINMKLEAVDRRNPRLVRVATVVDVDDHRLKISFDGCNHAYSYWVDTDDADLHPADWCHKTGHVLHHPAKSADSLADPGLKRCPPPVWKSIGHGKGSKYTTHHRKCPTPGCDGSGHVTGKFIGHHRLSGCPLAEKNQAKIKLDLSNAEGSPRKIDFLSFGRRKKSRHRGRIGRPPKYHKLQQDELKVSFQTRSLSVCWEQHCKLLPGVAGISANRVAKWTIEEVGNFVQKLTGCEQQAKHFKEESIDGEAFLLLTQVDIVKIMCIKLGPALKIYNSILMFKNADDSGVNSSST
SIO_010081: l3mbtl1
subclass of: SO_0000673
so part of: l3mbtl1
location: join(718128..718211,722699..722864,723744..723943,724457..724610,728335..728479,731218..731368,732928..733042,736693..736787,737388..737492,738459..738594,739752..739843,741180..741331,744330..744406,745197..745282,745374..745484,749599..749713,750685..750787,751660..751857,754379..754440,756073..756170,761430..761492,763392..763541)
location: region:718128-763541:1
so has part: feature:718128-718211:1:exon
so has part: feature:722699-722864:1:exon
so has part: feature:723744-723943:1:exon
so has part: feature:724457-724610:1:exon
so has part: feature:728335-728479:1:exon
so has part: feature:731218-731368:1:exon
so has part: feature:732928-733042:1:exon
so has part: feature:736693-736787:1:exon
so has part: feature:737388-737492:1:exon
so has part: feature:738459-738594:1:exon
so has part: feature:739752-739843:1:exon
so has part: feature:741180-741331:1:exon
so has part: feature:744330-744406:1:exon
so has part: feature:745197-745282:1:exon
so has part: feature:745374-745484:1:exon
so has part: feature:749599-749713:1:exon
so has part: feature:750685-750787:1:exon
so has part: feature:751660-751857:1:exon
so has part: feature:754379-754440:1:exon
so has part: feature:756073-756170:1:exon
so has part: feature:761430-761492:1:exon
so has part: feature:763392-763541:1:exon

XP_032897187.1
type: Protein
SIO_000068: ncbiprotein

position:718128:1
position: 718128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763541:1
position: 763541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718128-718211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:722699-722864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723744-723943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724457-724610:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728335-728479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:731218-731368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:732928-733042:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:736693-736787:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:737388-737492:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:738459-738594:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:739752-739843:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:741180-741331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:744330-744406:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:745197-745282:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:745374-745484:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:749599-749713:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:750685-750787:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:751660-751857:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:754379-754440:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:756073-756170:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761430-761492:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:763392-763541:1:exon

l3mbtl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: l3mbtl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 1 isoform X3
translation: MYMKPSEIHVSELISLASPCLPDSTAILVQWQSEVIVFRMNSGVGLEDLPSDARPPSQGSLHEVTGNSLTQTTHLPTKAFIIPAANLRKPRSFSRESQTISLPVKAEPSDSPVPATATISPQISGAHNCDVVSVLEWKDGIATLPGSNLKFRLNEFGVLEVVGTEGIVTKSVTRISRVTTVEAVSDTCSEEAGWNATTAHQLKQMTVSYRREAMGRCRCCVNCGHTYMASEVRGSSRFCSDHCLHQFKDNRSLRMGNVAVKRSAGAILKRVKKRKRKVCLSPSSESNEEYGYESTELEQAEERNKDSTSVRGHLMDGNSYTDFRQRHPDQHSLTFPGQAVSVVGKNKLSSWALYLEEEKSLAAPVKLFREYQSYPLTRNAFKVGMKLEGIDPTHPSMYFVLTVFEVCGYRVRLHFDGYSEGHDFWVNADCPDIHPAGWCEKTGHRLYLPRGYKDEEFSWPSYLRVTKSQAAAKHLFISQNTAVLPLGFRVGMKLEAVDRMNPSLICVATVTDIVDSRFLVHFDNWDDTYDYWCDASSPYIHPVGWCQQHGKPLTPPQGYLQPEQFAWDRYLEETGSTAAPARAFKTRPPHTFQINMKLEAVDRRNPRLVRVATVVDVDDHRLKISFDGCNHAYSYWVDTDDADLHPADWCHKTGHVLHHPAKSADSLADPGLKRCPPPVWKSIGHGKGSKYTTHHRIGRPPKYHKLQQDELKVSFQTRSLSVCWEQHCKLLPGVAGISANRVAKWTIEEVGNFVQKLTGCEQQAKHFKEESIDGEAFLLLTQVDIVKIMCIKLGPALKIYNSILMFKNADDSGVNSSST
SIO_010081: l3mbtl1
subclass of: SO_0000673
so part of: l3mbtl1
location: join(718128..718211,722699..722864,723744..723943,724457..724610,728335..728479,731218..731368,732928..733042,736693..736787,737388..737492,738459..738594,739752..739843,741180..741331,744330..744406,745197..745282,745374..745484,749599..749713,750685..750787,754379..754440,756073..756170,761430..761492,763392..763541)
location: region:718128-763541:1
so has part: feature:718128-718211:1:exon
so has part: feature:722699-722864:1:exon
so has part: feature:723744-723943:1:exon
so has part: feature:724457-724610:1:exon
so has part: feature:728335-728479:1:exon
so has part: feature:731218-731368:1:exon
so has part: feature:732928-733042:1:exon
so has part: feature:736693-736787:1:exon
so has part: feature:737388-737492:1:exon
so has part: feature:738459-738594:1:exon
so has part: feature:739752-739843:1:exon
so has part: feature:741180-741331:1:exon
so has part: feature:744330-744406:1:exon
so has part: feature:745197-745282:1:exon
so has part: feature:745374-745484:1:exon
so has part: feature:749599-749713:1:exon
so has part: feature:750685-750787:1:exon
so has part: feature:754379-754440:1:exon
so has part: feature:756073-756170:1:exon
so has part: feature:761430-761492:1:exon
so has part: feature:763392-763541:1:exon

XP_032897189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:718128-718211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:722699-722864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723744-723943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724457-724610:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728335-728479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:731218-731368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:732928-733042:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:736693-736787:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:737388-737492:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:738459-738594:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:739752-739843:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:741180-741331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:744330-744406:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:745197-745282:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:745374-745484:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:749599-749713:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:750685-750787:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:754379-754440:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:756073-756170:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:761430-761492:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:763392-763541:1:exon

l3mbtl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: l3mbtl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 1 isoform X2
translation: MYMKPSEIHVSELISLASPCLPDSTAILVQWQSEVIVFRMNSGVGLEDLPSDARPPSQGSLHEVTGNSLTQTTHLPTKAFIIPAANLRKPRSFSRESQTISLPVKAEPSDSPVPATATISPQISGAHNCDVVSVLEWKDGIATLPGSNLKFRLNEFGVLEVVGTEGIVTKSVTRISRVTTVEAVSDTCSEEAGWNATTAHQLKQMTVSYRREAMGRCRCCVNCGHTYMASEVRGSSRFCSDHCLHQFKDKSLRMGNVAVKRSAGAILKRVKKRKRKVCLSPSSESNEEYGYESTELEQAEERNKDSTSVRGHLMDGNSYTDFRQRHPDQHSLTFPGQAVSVVGKNKLSSWALYLEEEKSLAAPVKLFREYQSYPLTRNAFKVGMKLEGIDPTHPSMYFVLTVFEVCGYRVRLHFDGYSEGHDFWVNADCPDIHPAGWCEKTGHRLYLPRGYKDEEFSWPSYLRVTKSQAAAKHLFISQNTAVLPLGFRVGMKLEAVDRMNPSLICVATVTDIVDSRFLVHFDNWDDTYDYWCDASSPYIHPVGWCQQHGKPLTPPQGYLQPEQFAWDRYLEETGSTAAPARAFKTRPPHTFQINMKLEAVDRRNPRLVRVATVVDVDDHRLKISFDGCNHAYSYWVDTDDADLHPADWCHKTGHVLHHPAKSADSLADPGLKRCPPPVWKSIGHGKGSKYTTHHRKCPTPGCDGSGHVTGKFIGHHRLSGCPLAEKNQAKIKLDLSNAEGSPRKIDFLSFGRRKKSRHRGRIGRPPKYHKLQQDELKVSFQTRSLSVCWEQHCKLLPGVAGISANRVAKWTIEEVGNFVQKLTGCEQQAKHFKEESIDGEAFLLLTQVDIVKIMCIKLGPALKIYNSILMFKNADDSGVNSSST
SIO_010081: l3mbtl1
subclass of: SO_0000673
so part of: l3mbtl1
location: join(718128..718211,722699..722864,723744..723943,724457..724610,728335..728479,731221..731368,732928..733042,736693..736787,737388..737492,738459..738594,739752..739843,741180..741331,744330..744406,745197..745282,745374..745484,749599..749713,750685..750787,751660..751857,754379..754440,756073..756170,761430..761492,763392..763541)
location: region:718128-763541:1
so has part: feature:718128-718211:1:exon
so has part: feature:722699-722864:1:exon
so has part: feature:723744-723943:1:exon
so has part: feature:724457-724610:1:exon
so has part: feature:728335-728479:1:exon
so has part: feature:731221-731368:1:exon
so has part: feature:732928-733042:1:exon
so has part: feature:736693-736787:1:exon
so has part: feature:737388-737492:1:exon
so has part: feature:738459-738594:1:exon
so has part: feature:739752-739843:1:exon
so has part: feature:741180-741331:1:exon
so has part: feature:744330-744406:1:exon
so has part: feature:745197-745282:1:exon
so has part: feature:745374-745484:1:exon
so has part: feature:749599-749713:1:exon
so has part: feature:750685-750787:1:exon
so has part: feature:751660-751857:1:exon
so has part: feature:754379-754440:1:exon
so has part: feature:756073-756170:1:exon
so has part: feature:761430-761492:1:exon
so has part: feature:763392-763541:1:exon

XP_032897188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:718128-718211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:722699-722864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723744-723943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724457-724610:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728335-728479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:731221-731368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:732928-733042:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:736693-736787:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:737388-737492:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:738459-738594:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:739752-739843:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:741180-741331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:744330-744406:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:745197-745282:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:745374-745484:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:749599-749713:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:750685-750787:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:751660-751857:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:754379-754440:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:756073-756170:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761430-761492:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:763392-763541:1:exon

LOC116986130
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 799002..830651
location: region:799002-830651:1
so has part: feature:799002-830651:1:exon
subclass of: SO_0000010

116986130
type: Gene
SIO_000068: ncbigene

position:799002:1
position: 799002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830651:1
position: 830651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799002-830651:1:exon

LOC116986130
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986130
product: rho GTPase-activating protein 18-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033041301.1
SIO_010081: LOC116986130
subclass of: SO_0000673
so part of: LOC116986130
location: join(799002..799507,804900..805093,811346..811566,812051..812144,812826..812989,814957..815122,815227..815318,817169..817246,817411..817570,818523..818605,821439..821645,823971..824093,824832..824995,827883..827941,830009..830651)
location: region:799002-830651:1
so has part: feature:799002-799507:1:exon
so has part: feature:804900-805093:1:exon
so has part: feature:811346-811566:1:exon
so has part: feature:812051-812144:1:exon
so has part: feature:812826-812989:1:exon
so has part: feature:814957-815122:1:exon
so has part: feature:815227-815318:1:exon
so has part: feature:817169-817246:1:exon
so has part: feature:817411-817570:1:exon
so has part: feature:818523-818605:1:exon
so has part: feature:821439-821645:1:exon
so has part: feature:823971-824093:1:exon
so has part: feature:824832-824995:1:exon
so has part: feature:827883-827941:1:exon
so has part: feature:830009-830651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:799002-799507:1:exon

position:799507:1
position: 799507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:804900-805093:1:exon

position:804900:1
position: 804900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805093:1
position: 805093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:811346-811566:1:exon

position:811346:1
position: 811346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811566:1
position: 811566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:812051-812144:1:exon

position:812051:1
position: 812051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812144:1
position: 812144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:812826-812989:1:exon

position:812826:1
position: 812826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812989:1
position: 812989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:814957-815122:1:exon

position:814957:1
position: 814957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815122:1
position: 815122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:815227-815318:1:exon

position:815227:1
position: 815227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815318:1
position: 815318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:817169-817246:1:exon

position:817169:1
position: 817169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817246:1
position: 817246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:817411-817570:1:exon

position:817411:1
position: 817411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817570:1
position: 817570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:818523-818605:1:exon

position:818523:1
position: 818523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818605:1
position: 818605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:821439-821645:1:exon

position:821439:1
position: 821439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821645:1
position: 821645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:823971-824093:1:exon

position:823971:1
position: 823971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824093:1
position: 824093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:824832-824995:1:exon

position:824832:1
position: 824832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824995:1
position: 824995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:827883-827941:1:exon

position:827883:1
position: 827883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827941:1
position: 827941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:830009-830651:1:exon

position:830009:1
position: 830009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116986130
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986130
product: rho GTPase-activating protein 18-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033041302.1
SIO_010081: LOC116986130
subclass of: SO_0000673
so part of: LOC116986130
location: join(799004..799171,804900..805093,811346..811566,812051..812144,812826..812989,814957..815122,815227..815318,817169..817246,817411..817570,818523..818605,821439..821645,823971..824093,824832..824995,827883..827941,830009..830651)
location: region:799004-830651:1
so has part: feature:799004-799171:1:exon
so has part: feature:804900-805093:1:exon
so has part: feature:811346-811566:1:exon
so has part: feature:812051-812144:1:exon
so has part: feature:812826-812989:1:exon
so has part: feature:814957-815122:1:exon
so has part: feature:815227-815318:1:exon
so has part: feature:817169-817246:1:exon
so has part: feature:817411-817570:1:exon
so has part: feature:818523-818605:1:exon
so has part: feature:821439-821645:1:exon
so has part: feature:823971-824093:1:exon
so has part: feature:824832-824995:1:exon
so has part: feature:827883-827941:1:exon
so has part: feature:830009-830651:1:exon

position:799004:1
position: 799004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799004-799171:1:exon

position:799171:1
position: 799171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:804900-805093:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811346-811566:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812051-812144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:812826-812989:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:814957-815122:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:815227-815318:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:817169-817246:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:817411-817570:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:818523-818605:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:821439-821645:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:823971-824093:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:824832-824995:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:827883-827941:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:830009-830651:1:exon

LOC116986130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 18-like isoform X1
translation: MDNKKMDRISQTTSRIPRPKLYVNSMPSTVRSYTRPRYTHRRDLSPSIMSGNQGQRFPEQPFSDSSSCQDSLDNQSLEDFWSEVKHIKESRGSEADESSDVKTPDDGDLEVDWLRDTGLSTLINDNSHDDASLVLLSTLTRTQSAAVQRRVANYTLSLRVKNKQPVRDVRDIFAGPKFSSRDTEPRDQHGSIIDSLQQKQHLLPGEEKGEACSDDHEIPSPTQCNLSKEEIVLFHVSYSEQAQIFRDDRWRKKMSRKQNNDVDLPQYRIHRNKLGTTRMEDLSELDMKKVRTLALIELTALFDVLDMEVKRQKTTKVKVQENKLFGVSLAQLIENDQKIAPCTKVPLFLKKLLCCLEDNGLETEGILRISGSLARIKSLQQELESNFYQNNFDWKKVQQNDGAGLLKMFIREMPYPLLTTEYVAAFATVRNFTDQIQMIHALNLLVVILPDVYQATLKLLLEFLRKVIEKEQKNKMNLWNVSTIIAPNLFMHKGIANKMPEGNEKQQAEQAANVVRMLIHYQDLLWTVPCFLVAQVRKLNEQSRKHDKRIKNLLKKIHVDKHERQVSEHQCNKGIKIQAPRLLKGNMDIQLDPDTTTRDLVQQFRKKLDCSNWTVENTALTNRSNDSTDSSEFCLYEVGGNIGERCLDPDTRMWDLFKVNPQAEWVIRPCATLSNKS
SIO_010081: LOC116986130
subclass of: SO_0000673
so part of: LOC116986130
location: join(799386..799507,804900..805093,811346..811566,812051..812144,812826..812989,814957..815122,815227..815318,817169..817246,817411..817570,818523..818605,821439..821645,823971..824093,824832..824995,827883..827941,830009..830115)
location: region:799386-830115:1
so has part: feature:799386-799507:1:exon
so has part: feature:804900-805093:1:exon
so has part: feature:811346-811566:1:exon
so has part: feature:812051-812144:1:exon
so has part: feature:812826-812989:1:exon
so has part: feature:814957-815122:1:exon
so has part: feature:815227-815318:1:exon
so has part: feature:817169-817246:1:exon
so has part: feature:817411-817570:1:exon
so has part: feature:818523-818605:1:exon
so has part: feature:821439-821645:1:exon
so has part: feature:823971-824093:1:exon
so has part: feature:824832-824995:1:exon
so has part: feature:827883-827941:1:exon
so has part: feature:830009-830115:1:exon

XP_032897192.1
type: Protein
SIO_000068: ncbiprotein

position:799386:1
position: 799386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830115:1
position: 830115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799386-799507:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:804900-805093:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811346-811566:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812051-812144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:812826-812989:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:814957-815122:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:815227-815318:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:817169-817246:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:817411-817570:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:818523-818605:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:821439-821645:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:823971-824093:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:824832-824995:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:827883-827941:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:830009-830115:1:exon

LOC116986130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 18-like isoform X2
translation: MSGNQGQRFPEQPFSDSSSCQDSLDNQSLEDFWSEVKHIKESRGSEADESSDVKTPDDGDLEVDWLRDTGLSTLINDNSHDDASLVLLSTLTRTQSAAVQRRVANYTLSLRVKNKQPVRDVRDIFAGPKFSSRDTEPRDQHGSIIDSLQQKQHLLPGEEKGEACSDDHEIPSPTQCNLSKEEIVLFHVSYSEQAQIFRDDRWRKKMSRKQNNDVDLPQYRIHRNKLGTTRMEDLSELDMKKVRTLALIELTALFDVLDMEVKRQKTTKVKVQENKLFGVSLAQLIENDQKIAPCTKVPLFLKKLLCCLEDNGLETEGILRISGSLARIKSLQQELESNFYQNNFDWKKVQQNDGAGLLKMFIREMPYPLLTTEYVAAFATVRNFTDQIQMIHALNLLVVILPDVYQATLKLLLEFLRKVIEKEQKNKMNLWNVSTIIAPNLFMHKGIANKMPEGNEKQQAEQAANVVRMLIHYQDLLWTVPCFLVAQVRKLNEQSRKHDKRIKNLLKKIHVDKHERQVSEHQCNKGIKIQAPRLLKGNMDIQLDPDTTTRDLVQQFRKKLDCSNWTVENTALTNRSNDSTDSSEFCLYEVGGNIGERCLDPDTRMWDLFKVNPQAEWVIRPCATLSNKS
SIO_010081: LOC116986130
subclass of: SO_0000673
so part of: LOC116986130
location: join(804922..805093,811346..811566,812051..812144,812826..812989,814957..815122,815227..815318,817169..817246,817411..817570,818523..818605,821439..821645,823971..824093,824832..824995,827883..827941,830009..830115)
location: region:804922-830115:1
so has part: feature:804922-805093:1:exon
so has part: feature:811346-811566:1:exon
so has part: feature:812051-812144:1:exon
so has part: feature:812826-812989:1:exon
so has part: feature:814957-815122:1:exon
so has part: feature:815227-815318:1:exon
so has part: feature:817169-817246:1:exon
so has part: feature:817411-817570:1:exon
so has part: feature:818523-818605:1:exon
so has part: feature:821439-821645:1:exon
so has part: feature:823971-824093:1:exon
so has part: feature:824832-824995:1:exon
so has part: feature:827883-827941:1:exon
so has part: feature:830009-830115:1:exon

XP_032897193.1
type: Protein
SIO_000068: ncbiprotein

position:804922:1
position: 804922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804922-805093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:811346-811566:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:812051-812144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812826-812989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:814957-815122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:815227-815318:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:817169-817246:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:817411-817570:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:818523-818605:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:821439-821645:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:823971-824093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:824832-824995:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:827883-827941:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:830009-830115:1:exon

LOC116986131
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 897660..899283
location: region:897660-899283:1
so has part: feature:897660-899283:1:exon
subclass of: SO_0000011

116986131
type: Gene
SIO_000068: ncbigene

position:897660:1
position: 897660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899283:1
position: 899283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:897660-899283:1:exon

LOC116986131
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116986131
product: uncharacterized LOC116986131
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004415426.1
SIO_010081: LOC116986131
subclass of: SO_0000673
so part of: LOC116986131
location: join(897660..897905,899127..899283)
location: region:897660-899283:1
so has part: feature:897660-897905:1:exon
so has part: feature:899127-899283:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:897660-897905:1:exon

position:897905:1
position: 897905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:899127-899283:1:exon

position:899127:1
position: 899127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

slc32a1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: slc32a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 903564..906479
location: region:903564-906479:1
so has part: feature:903564-906479:1:exon
subclass of: SO_0000010

116986132
type: Gene
SIO_000068: ncbigene

position:903564:1
position: 903564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906479:1
position: 906479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903564-906479:1:exon

slc32a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: slc32a1
product: solute carrier family 32 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033041303.1
SIO_010081: slc32a1
subclass of: SO_0000673
so part of: slc32a1
location: join(903564..904302,904725..906479)
location: region:903564-906479:1
so has part: feature:903564-904302:1:exon
so has part: feature:904725-906479:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:903564-904302:1:exon

position:904302:1
position: 904302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:904725-906479:1:exon

position:904725:1
position: 904725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

slc32a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: slc32a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicular inhibitory amino acid transporter
translation: MATLIKSKLSNVATSVSNKSQAKVSGVFARLGFQAATNEEAVGFAQCDDLDYEYRQGLQMDILKGDEESGQAGDVGLGDSHYQRDGAGAAAGAADGAGVGLPLSVSKGTEPCTELAAQDKPKITSWEAGWNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENEDGVLVRVRDSYVDVANACCAPRFPRLGGRVVNVAQIIELIMTCVLYVVVSGNLMYNSFPNLPISQKSWSILATAVLLPCAFLKNLKAVSKFSLLCTLAHFVINVLVIAYCLSRARDWAWDKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMKSPKEFRSVMNWTHIAACILKGLFALVAFLTWADATKEVITDNLPYTIRAVVNIFLVSKALLSYPLPFFAAVEVLEKSFFQEGRIAMFTNCYGSDGKIKSWGLALRCVLVVLTLLMAMYIPHFALLMGLTGSLTGAGLCFLLPSLFHLKLQWRQLQWHHVFFDVSIFVIGSICSVSGFIHSLEGLIEVYDTNTSG
SIO_010081: slc32a1
subclass of: SO_0000673
so part of: slc32a1
location: join(903892..904302,904725..905912)
location: region:903892-905912:1
so has part: feature:903892-904302:1:exon
so has part: feature:904725-905912:1:exon

XP_032897194.1
type: Protein
SIO_000068: ncbiprotein

position:903892:1
position: 903892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905912:1
position: 905912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903892-904302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:904725-905912:1:exon

ptprt
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ptprt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1023696..1611872
location: region:1023696-1611872:1
so has part: feature:1023696-1611872:1:exon
subclass of: SO_0000010

116986133
type: Gene
SIO_000068: ncbigene

position:1023696:1
position: 1023696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1611872:1
position: 1611872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023696-1611872:1:exon

ptprt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ptprt
product: protein tyrosine phosphatase receptor type T, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033041307.1
SIO_010081: ptprt
subclass of: SO_0000673
so part of: ptprt
location: join(1023696..1024418,1185119..1185244,1260380..1260651,1262722..1262803,1276257..1276372,1285613..1285787,1309395..1309688,1410302..1410598,1419997..1420106,1424281..1424482,1429321..1429423,1451929..1452202,1479166..1479202,1480388..1480435,1492339..1492474,1498895..1498924,1513633..1513739,1517032..1517067,1534524..1534711,1550748..1550835,1552030..1552106,1554980..1555016,1577060..1577157,1586656..1586772,1588591..1588745,1590520..1590655,1596536..1596685,1599918..1600091,1601180..1601311,1603425..1603550,1607669..1607832,1608881..1609016,1610684..1611872)
location: region:1023696-1611872:1
so has part: feature:1023696-1024418:1:exon
so has part: feature:1185119-1185244:1:exon
so has part: feature:1260380-1260651:1:exon
so has part: feature:1262722-1262803:1:exon
so has part: feature:1276257-1276372:1:exon
so has part: feature:1285613-1285787:1:exon
so has part: feature:1309395-1309688:1:exon
so has part: feature:1410302-1410598:1:exon
so has part: feature:1419997-1420106:1:exon
so has part: feature:1424281-1424482:1:exon
so has part: feature:1429321-1429423:1:exon
so has part: feature:1451929-1452202:1:exon
so has part: feature:1479166-1479202:1:exon
so has part: feature:1480388-1480435:1:exon
so has part: feature:1492339-1492474:1:exon
so has part: feature:1498895-1498924:1:exon
so has part: feature:1513633-1513739:1:exon
so has part: feature:1517032-1517067:1:exon
so has part: feature:1534524-1534711:1:exon
so has part: feature:1550748-1550835:1:exon
so has part: feature:1552030-1552106:1:exon
so has part: feature:1554980-1555016:1:exon
so has part: feature:1577060-1577157:1:exon
so has part: feature:1586656-1586772:1:exon
so has part: feature:1588591-1588745:1:exon
so has part: feature:1590520-1590655:1:exon
so has part: feature:1596536-1596685:1:exon
so has part: feature:1599918-1600091:1:exon
so has part: feature:1601180-1601311:1:exon
so has part: feature:1603425-1603550:1:exon
so has part: feature:1607669-1607832:1:exon
so has part: feature:1608881-1609016:1:exon
so has part: feature:1610684-1611872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1023696-1024418:1:exon

position:1024418:1
position: 1024418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1185119-1185244:1:exon

position:1185119:1
position: 1185119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185244:1
position: 1185244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1260380-1260651:1:exon

position:1260380:1
position: 1260380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260651:1
position: 1260651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1262722-1262803:1:exon

position:1262722:1
position: 1262722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262803:1
position: 1262803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1276257-1276372:1:exon

position:1276257:1
position: 1276257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276372:1
position: 1276372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1285613-1285787:1:exon

position:1285613:1
position: 1285613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285787:1
position: 1285787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1309395-1309688:1:exon

position:1309395:1
position: 1309395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1309688:1
position: 1309688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1410302-1410598:1:exon

position:1410302:1
position: 1410302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1410598:1
position: 1410598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1419997-1420106:1:exon

position:1419997:1
position: 1419997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1420106:1
position: 1420106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1424281-1424482:1:exon

position:1424281:1
position: 1424281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424482:1
position: 1424482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1429321-1429423:1:exon

position:1429321:1
position: 1429321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429423:1
position: 1429423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1451929-1452202:1:exon

position:1451929:1
position: 1451929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452202:1
position: 1452202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1479166-1479202:1:exon

position:1479166:1
position: 1479166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1479202:1
position: 1479202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1480388-1480435:1:exon

position:1480388:1
position: 1480388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480435:1
position: 1480435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1492339-1492474:1:exon

position:1492339:1
position: 1492339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1492474:1
position: 1492474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1498895-1498924:1:exon

position:1498895:1
position: 1498895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498924:1
position: 1498924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1513633-1513739:1:exon

position:1513633:1
position: 1513633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513739:1
position: 1513739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1517032-1517067:1:exon

position:1517032:1
position: 1517032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1517067:1
position: 1517067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1534524-1534711:1:exon

position:1534524:1
position: 1534524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1534711:1
position: 1534711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1550748-1550835:1:exon

position:1550748:1
position: 1550748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1550835:1
position: 1550835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1552030-1552106:1:exon

position:1552030:1
position: 1552030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1552106:1
position: 1552106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1554980-1555016:1:exon

position:1554980:1
position: 1554980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1555016:1
position: 1555016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1577060-1577157:1:exon

position:1577060:1
position: 1577060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1577157:1
position: 1577157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1586656-1586772:1:exon

position:1586656:1
position: 1586656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586772:1
position: 1586772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1588591-1588745:1:exon

position:1588591:1
position: 1588591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588745:1
position: 1588745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1590520-1590655:1:exon

position:1590520:1
position: 1590520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1590655:1
position: 1590655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1596536-1596685:1:exon

position:1596536:1
position: 1596536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1596685:1
position: 1596685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1599918-1600091:1:exon

position:1599918:1
position: 1599918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1600091:1
position: 1600091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1601180-1601311:1:exon

position:1601180:1
position: 1601180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1601311:1
position: 1601311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1603425-1603550:1:exon

position:1603425:1
position: 1603425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1603550:1
position: 1603550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1607669-1607832:1:exon

position:1607669:1
position: 1607669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1607832:1
position: 1607832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1608881-1609016:1:exon

position:1608881:1
position: 1608881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1609016:1
position: 1609016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1610684-1611872:1:exon

position:1610684:1
position: 1610684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ptprt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ptprt
product: protein tyrosine phosphatase receptor type T, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033041304.1
SIO_010081: ptprt
subclass of: SO_0000673
so part of: ptprt
location: join(1023696..1024418,1185119..1185244,1260380..1260651,1262722..1262803,1276257..1276372,1285613..1285787,1309395..1309688,1410302..1410598,1419997..1420106,1424281..1424482,1429321..1429423,1451929..1452202,1479166..1479202,1492339..1492474,1498895..1498924,1513633..1513739,1517032..1517067,1534524..1534711,1550748..1550835,1552030..1552106,1554980..1555016,1577060..1577157,1586656..1586772,1588591..1588745,1590520..1590655,1596536..1596685,1599918..1600091,1601180..1601311,1603425..1603550,1607669..1607832,1608881..1609016,1610684..1611872)
location: region:1023696-1611872:1
so has part: feature:1023696-1024418:1:exon
so has part: feature:1185119-1185244:1:exon
so has part: feature:1260380-1260651:1:exon
so has part: feature:1262722-1262803:1:exon
so has part: feature:1276257-1276372:1:exon
so has part: feature:1285613-1285787:1:exon
so has part: feature:1309395-1309688:1:exon
so has part: feature:1410302-1410598:1:exon
so has part: feature:1419997-1420106:1:exon
so has part: feature:1424281-1424482:1:exon
so has part: feature:1429321-1429423:1:exon
so has part: feature:1451929-1452202:1:exon
so has part: feature:1479166-1479202:1:exon
so has part: feature:1492339-1492474:1:exon
so has part: feature:1498895-1498924:1:exon
so has part: feature:1513633-1513739:1:exon
so has part: feature:1517032-1517067:1:exon
so has part: feature:1534524-1534711:1:exon
so has part: feature:1550748-1550835:1:exon
so has part: feature:1552030-1552106:1:exon
so has part: feature:1554980-1555016:1:exon
so has part: feature:1577060-1577157:1:exon
so has part: feature:1586656-1586772:1:exon
so has part: feature:1588591-1588745:1:exon
so has part: feature:1590520-1590655:1:exon
so has part: feature:1596536-1596685:1:exon
so has part: feature:1599918-1600091:1:exon
so has part: feature:1601180-1601311:1:exon
so has part: feature:1603425-1603550:1:exon
so has part: feature:1607669-1607832:1:exon
so has part: feature:1608881-1609016:1:exon
so has part: feature:1610684-1611872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1023696-1024418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185119-1185244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260380-1260651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1262722-1262803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276257-1276372:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1285613-1285787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1309395-1309688:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1410302-1410598:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1419997-1420106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1424281-1424482:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1429321-1429423:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1451929-1452202:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1479166-1479202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1492339-1492474:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1498895-1498924:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1513633-1513739:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1517032-1517067:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1534524-1534711:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1550748-1550835:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1552030-1552106:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1554980-1555016:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1577060-1577157:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1586656-1586772:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1588591-1588745:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1590520-1590655:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1596536-1596685:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1599918-1600091:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1601180-1601311:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1603425-1603550:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1607669-1607832:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1608881-1609016:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1610684-1611872:1:exon

ptprt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ptprt
product: protein tyrosine phosphatase receptor type T, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033041305.1
SIO_010081: ptprt
subclass of: SO_0000673
so part of: ptprt
location: join(1023696..1024418,1185119..1185244,1260380..1260651,1262722..1262803,1276257..1276372,1285613..1285787,1309395..1309688,1410302..1410598,1419997..1420106,1424281..1424482,1429321..1429423,1451929..1452202,1479166..1479202,1492339..1492474,1513633..1513739,1517032..1517067,1534524..1534711,1550748..1550835,1552030..1552106,1554980..1555016,1577060..1577157,1586656..1586772,1588591..1588745,1590520..1590655,1596536..1596685,1599918..1600091,1601180..1601311,1603425..1603550,1607669..1607832,1608881..1609016,1610684..1611872)
location: region:1023696-1611872:1
so has part: feature:1023696-1024418:1:exon
so has part: feature:1185119-1185244:1:exon
so has part: feature:1260380-1260651:1:exon
so has part: feature:1262722-1262803:1:exon
so has part: feature:1276257-1276372:1:exon
so has part: feature:1285613-1285787:1:exon
so has part: feature:1309395-1309688:1:exon
so has part: feature:1410302-1410598:1:exon
so has part: feature:1419997-1420106:1:exon
so has part: feature:1424281-1424482:1:exon
so has part: feature:1429321-1429423:1:exon
so has part: feature:1451929-1452202:1:exon
so has part: feature:1479166-1479202:1:exon
so has part: feature:1492339-1492474:1:exon
so has part: feature:1513633-1513739:1:exon
so has part: feature:1517032-1517067:1:exon
so has part: feature:1534524-1534711:1:exon
so has part: feature:1550748-1550835:1:exon
so has part: feature:1552030-1552106:1:exon
so has part: feature:1554980-1555016:1:exon
so has part: feature:1577060-1577157:1:exon
so has part: feature:1586656-1586772:1:exon
so has part: feature:1588591-1588745:1:exon
so has part: feature:1590520-1590655:1:exon
so has part: feature:1596536-1596685:1:exon
so has part: feature:1599918-1600091:1:exon
so has part: feature:1601180-1601311:1:exon
so has part: feature:1603425-1603550:1:exon
so has part: feature:1607669-1607832:1:exon
so has part: feature:1608881-1609016:1:exon
so has part: feature:1610684-1611872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1023696-1024418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185119-1185244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260380-1260651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1262722-1262803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276257-1276372:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1285613-1285787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1309395-1309688:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1410302-1410598:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1419997-1420106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1424281-1424482:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1429321-1429423:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1451929-1452202:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1479166-1479202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1492339-1492474:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1513633-1513739:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1517032-1517067:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1534524-1534711:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1550748-1550835:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1552030-1552106:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1554980-1555016:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1577060-1577157:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1586656-1586772:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1588591-1588745:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1590520-1590655:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1596536-1596685:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1599918-1600091:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1601180-1601311:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1603425-1603550:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1607669-1607832:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1608881-1609016:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1610684-1611872:1:exon

ptprt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ptprt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase T isoform X3
translation: MSALLIALSLLGHLVLGAAGQVFAGSCSFDDHYSNCGYILALGTNGFNWEQINTWERPSLDPSVPTGTFMMVNSSGRLSGQKAHLMLPILKENDTHCVDFHYFLSSKDRSSPGVLNVFVKVNGGPPGNPVWNVSGLITEGWIKTELAISTFWPNFYQVIFESVASKDHPGYIAIDEVRVLAHPCRKAPHFLRLQNVEVNAGQNATFQCIAGGKWSQHDKLWLQQWKGKDTALMVTRVVNHRRFSATISVADTSQKTTNKYRCVIRSEGGSGVSNYAELIVKDPPTPIAPPELLAVGATYLWIKPNANSIIGDGPIILKEVEYRTTSGNWAETHIVDSQTYKLWHLDPDVEYEIRVLLTRPGDGGTGPPGPPLTTRTKCADPVHGPQTVEVVDVRSRQLTIHWEPFGYVVTRCHSYNLTVLYQYVLGLREYTAEELMQTSSHYTLRGLQPYTTVKLRLALTNPEGRKVSDEIVIQTEEDVPGLVPMESIQGGPFEEKIYLQWKPPNETNGIITLYEITYKAAGSFDPNVELSSQRGRVFKQRNETHHLFVGLYPGTTYSFTIRASTVKGFGLPITNHITTKISAPSMPLYDTDAPLNETDTTITVLLKPAQSRGAPVSAYQLVVKEERSQKARRAADIAECFPAPISYKNASLLDALHYTAAELKPGNLPVSQPFTIGDNKTYNGYWNPPLSSVKSYSIYFQAVSKANGETKVSCLRLATKGRIQITTPYILVIPSAGASTQNSNTVEPEKQVDNTVKMAGVIAGILMFIIIMLGVTLIVKKRRSAYSYSYYLKLAKKQKETQSGTQREMESVVTATDKSCSKQRDETLAAEQLTPSAVLGSNREEMIQPTRVVQTHSHRNCEPVEMSYQAGQLQPAIRVADLLQHITQMKCGKGYGFKEEYESLPEGQSAAWDTAKKEENRSKNRYGNIIAYDHSRVRLQLLEGDPHSDYINANYIDGYHQPRHYIATQGPMQETVKDFWRMIWQENSPSVVMVTNLVEVGRVKCCRYWPDDTELYGDIKVTLVESEPLAEYVIRTFTVQKKGNHDIREIRQFHFTSWPDHGVPCFATGLLGFVRQVKFLNPNEVGPIIVHCSAGAGRTGCFIAIDIMLDMADSEGVVDVYNCIRELRSQRVNMVQTEEQYVFVHDAILEACLCGNTAIPVCEFRANFYNITKVDPQTNSSQIKDEFQTLNIVTPRVRAEDCSVGLLPRNHNKNRNMDVLPPDRCLPFLISVDGETSNYINAALMDSHKQPAAFIVTQHPLPNTVTDFWRLVFDYHCSAIVMLNELDAAQLCIQYWPEKSLCCYGPIQVEFISADFEEDIIVRVFRIYNMARPQDGYRIVQQFQFIGWPSYRDIPMSKRSFLKLIKRLEKWQEEYSGGDGRTVVHCFNGGGRSGTLCVVRSICEMIHQQNIIDVFHTVKTLRNNKSNMVDTLEQYKFCYDVALDYLCSF
SIO_010081: ptprt
subclass of: SO_0000673
so part of: ptprt
location: join(1024346..1024418,1185119..1185244,1260380..1260651,1262722..1262803,1276257..1276372,1285613..1285787,1309395..1309688,1410302..1410598,1419997..1420106,1424281..1424482,1429321..1429423,1451929..1452202,1479166..1479202,1480388..1480435,1492339..1492474,1498895..1498924,1513633..1513739,1517032..1517067,1534524..1534711,1550748..1550835,1552030..1552106,1554980..1555016,1577060..1577157,1586656..1586772,1588591..1588745,1590520..1590655,1596536..1596685,1599918..1600091,1601180..1601311,1603425..1603550,1607669..1607832,1608881..1609016,1610684..1610737)
location: region:1024346-1610737:1
so has part: feature:1024346-1024418:1:exon
so has part: feature:1185119-1185244:1:exon
so has part: feature:1260380-1260651:1:exon
so has part: feature:1262722-1262803:1:exon
so has part: feature:1276257-1276372:1:exon
so has part: feature:1285613-1285787:1:exon
so has part: feature:1309395-1309688:1:exon
so has part: feature:1410302-1410598:1:exon
so has part: feature:1419997-1420106:1:exon
so has part: feature:1424281-1424482:1:exon
so has part: feature:1429321-1429423:1:exon
so has part: feature:1451929-1452202:1:exon
so has part: feature:1479166-1479202:1:exon
so has part: feature:1480388-1480435:1:exon
so has part: feature:1492339-1492474:1:exon
so has part: feature:1498895-1498924:1:exon
so has part: feature:1513633-1513739:1:exon
so has part: feature:1517032-1517067:1:exon
so has part: feature:1534524-1534711:1:exon
so has part: feature:1550748-1550835:1:exon
so has part: feature:1552030-1552106:1:exon
so has part: feature:1554980-1555016:1:exon
so has part: feature:1577060-1577157:1:exon
so has part: feature:1586656-1586772:1:exon
so has part: feature:1588591-1588745:1:exon
so has part: feature:1590520-1590655:1:exon
so has part: feature:1596536-1596685:1:exon
so has part: feature:1599918-1600091:1:exon
so has part: feature:1601180-1601311:1:exon
so has part: feature:1603425-1603550:1:exon
so has part: feature:1607669-1607832:1:exon
so has part: feature:1608881-1609016:1:exon
so has part: feature:1610684-1610737:1:exon

XP_032897198.1
type: Protein
SIO_000068: ncbiprotein

position:1024346:1
position: 1024346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1610737:1
position: 1610737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1024346-1024418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185119-1185244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260380-1260651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1262722-1262803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276257-1276372:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1285613-1285787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1309395-1309688:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1410302-1410598:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1419997-1420106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1424281-1424482:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1429321-1429423:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1451929-1452202:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1479166-1479202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1480388-1480435:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1492339-1492474:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1498895-1498924:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1513633-1513739:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1517032-1517067:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1534524-1534711:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1550748-1550835:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1552030-1552106:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1554980-1555016:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1577060-1577157:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1586656-1586772:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1588591-1588745:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1590520-1590655:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1596536-1596685:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1599918-1600091:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1601180-1601311:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1603425-1603550:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1607669-1607832:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1608881-1609016:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1610684-1610737:1:exon

ptprt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ptprt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase T isoform X1
translation: MSALLIALSLLGHLVLGAAGQVFAGSCSFDDHYSNCGYILALGTNGFNWEQINTWERPSLDPSVPTGTFMMVNSSGRLSGQKAHLMLPILKENDTHCVDFHYFLSSKDRSSPGVLNVFVKVNGGPPGNPVWNVSGLITEGWIKTELAISTFWPNFYQVIFESVASKDHPGYIAIDEVRVLAHPCRKAPHFLRLQNVEVNAGQNATFQCIAGGKWSQHDKLWLQQWKGKDTALMVTRVVNHRRFSATISVADTSQKTTNKYRCVIRSEGGSGVSNYAELIVKDPPTPIAPPELLAVGATYLWIKPNANSIIGDGPIILKEVEYRTTSGNWAETHIVDSQTYKLWHLDPDVEYEIRVLLTRPGDGGTGPPGPPLTTRTKCADPVHGPQTVEVVDVRSRQLTIHWEPFGYVVTRCHSYNLTVLYQYVLGLREYTAEELMQTSSHYTLRGLQPYTTVKLRLALTNPEGRKVSDEIVIQTEEDVPGLVPMESIQGGPFEEKIYLQWKPPNETNGIITLYEITYKAAGSFDPNVELSSQRGRVFKQRNETHHLFVGLYPGTTYSFTIRASTVKGFGLPITNHITTKISAPSMPLYDTDAPLNETDTTITVLLKPAQSRGAPVSAYQLVVKEERSQKARRAADIAECFPAPISYKNASLLDALHYTAAELKPGNLPVSQPFTIGDNKTYNGYWNPPLSSVKSYSIYFQAVSKANGETKVSCLRLATKGASTQNSNTVEPEKQVDNTVKMAGVIAGILMFIIIMLGVTLIVKKRRSAYSYSYYLKLAKKQKETQSGTQREMESVVTATDKSCSKQRDETLAAEQLTPSAVLGSNREEMIQPTRVVQTHSHRNCEPVEMSYQAGQLQPAIRVADLLQHITQMKCGKGYGFKEEYESLPEGQSAAWDTAKKEENRSKNRYGNIIAYDHSRVRLQLLEGDPHSDYINANYIDGYHQPRHYIATQGPMQETVKDFWRMIWQENSPSVVMVTNLVEVGRVKCCRYWPDDTELYGDIKVTLVESEPLAEYVIRTFTVQKKGNHDIREIRQFHFTSWPDHGVPCFATGLLGFVRQVKFLNPNEVGPIIVHCSAGAGRTGCFIAIDIMLDMADSEGVVDVYNCIRELRSQRVNMVQTEEQYVFVHDAILEACLCGNTAIPVCEFRANFYNITKVDPQTNSSQIKDEFQTLNIVTPRVRAEDCSVGLLPRNHNKNRNMDVLPPDRCLPFLISVDGETSNYINAALMDSHKQPAAFIVTQHPLPNTVTDFWRLVFDYHCSAIVMLNELDAAQLCIQYWPEKSLCCYGPIQVEFISADFEEDIIVRVFRIYNMARPQDGYRIVQQFQFIGWPSYRDIPMSKRSFLKLIKRLEKWQEEYSGGDGRTVVHCFNGGGRSGTLCVVRSICEMIHQQNIIDVFHTVKTLRNNKSNMVDTLEQYKFCYDVALDYLCSF
SIO_010081: ptprt
subclass of: SO_0000673
so part of: ptprt
location: join(1024346..1024418,1185119..1185244,1260380..1260651,1262722..1262803,1276257..1276372,1285613..1285787,1309395..1309688,1410302..1410598,1419997..1420106,1424281..1424482,1429321..1429423,1451929..1452202,1479166..1479202,1492339..1492474,1498895..1498924,1513633..1513739,1517032..1517067,1534524..1534711,1550748..1550835,1552030..1552106,1554980..1555016,1577060..1577157,1586656..1586772,1588591..1588745,1590520..1590655,1596536..1596685,1599918..1600091,1601180..1601311,1603425..1603550,1607669..1607832,1608881..1609016,1610684..1610737)
location: region:1024346-1610737:1
so has part: feature:1024346-1024418:1:exon
so has part: feature:1185119-1185244:1:exon
so has part: feature:1260380-1260651:1:exon
so has part: feature:1262722-1262803:1:exon
so has part: feature:1276257-1276372:1:exon
so has part: feature:1285613-1285787:1:exon
so has part: feature:1309395-1309688:1:exon
so has part: feature:1410302-1410598:1:exon
so has part: feature:1419997-1420106:1:exon
so has part: feature:1424281-1424482:1:exon
so has part: feature:1429321-1429423:1:exon
so has part: feature:1451929-1452202:1:exon
so has part: feature:1479166-1479202:1:exon
so has part: feature:1492339-1492474:1:exon
so has part: feature:1498895-1498924:1:exon
so has part: feature:1513633-1513739:1:exon
so has part: feature:1517032-1517067:1:exon
so has part: feature:1534524-1534711:1:exon
so has part: feature:1550748-1550835:1:exon
so has part: feature:1552030-1552106:1:exon
so has part: feature:1554980-1555016:1:exon
so has part: feature:1577060-1577157:1:exon
so has part: feature:1586656-1586772:1:exon
so has part: feature:1588591-1588745:1:exon
so has part: feature:1590520-1590655:1:exon
so has part: feature:1596536-1596685:1:exon
so has part: feature:1599918-1600091:1:exon
so has part: feature:1601180-1601311:1:exon
so has part: feature:1603425-1603550:1:exon
so has part: feature:1607669-1607832:1:exon
so has part: feature:1608881-1609016:1:exon
so has part: feature:1610684-1610737:1:exon

XP_032897195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1024346-1024418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185119-1185244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260380-1260651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1262722-1262803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276257-1276372:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1285613-1285787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1309395-1309688:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1410302-1410598:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1419997-1420106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1424281-1424482:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1429321-1429423:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1451929-1452202:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1479166-1479202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1492339-1492474:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1498895-1498924:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1513633-1513739:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1517032-1517067:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1534524-1534711:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1550748-1550835:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1552030-1552106:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1554980-1555016:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1577060-1577157:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1586656-1586772:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1588591-1588745:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1590520-1590655:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1596536-1596685:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1599918-1600091:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1601180-1601311:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1603425-1603550:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1607669-1607832:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1608881-1609016:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1610684-1610737:1:exon

ptprt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ptprt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase T isoform X2
translation: MSALLIALSLLGHLVLGAAGQVFAGSCSFDDHYSNCGYILALGTNGFNWEQINTWERPSLDPSVPTGTFMMVNSSGRLSGQKAHLMLPILKENDTHCVDFHYFLSSKDRSSPGVLNVFVKVNGGPPGNPVWNVSGLITEGWIKTELAISTFWPNFYQVIFESVASKDHPGYIAIDEVRVLAHPCRKAPHFLRLQNVEVNAGQNATFQCIAGGKWSQHDKLWLQQWKGKDTALMVTRVVNHRRFSATISVADTSQKTTNKYRCVIRSEGGSGVSNYAELIVKDPPTPIAPPELLAVGATYLWIKPNANSIIGDGPIILKEVEYRTTSGNWAETHIVDSQTYKLWHLDPDVEYEIRVLLTRPGDGGTGPPGPPLTTRTKCADPVHGPQTVEVVDVRSRQLTIHWEPFGYVVTRCHSYNLTVLYQYVLGLREYTAEELMQTSSHYTLRGLQPYTTVKLRLALTNPEGRKVSDEIVIQTEEDVPGLVPMESIQGGPFEEKIYLQWKPPNETNGIITLYEITYKAAGSFDPNVELSSQRGRVFKQRNETHHLFVGLYPGTTYSFTIRASTVKGFGLPITNHITTKISAPSMPLYDTDAPLNETDTTITVLLKPAQSRGAPVSAYQLVVKEERSQKARRAADIAECFPAPISYKNASLLDALHYTAAELKPGNLPVSQPFTIGDNKTYNGYWNPPLSSVKSYSIYFQAVSKANGETKVSCLRLATKGASTQNSNTVEPEKQVDNTVKMAGVIAGILMFIIIMLGVTLIVKKRKLAKKQKETQSGTQREMESVVTATDKSCSKQRDETLAAEQLTPSAVLGSNREEMIQPTRVVQTHSHRNCEPVEMSYQAGQLQPAIRVADLLQHITQMKCGKGYGFKEEYESLPEGQSAAWDTAKKEENRSKNRYGNIIAYDHSRVRLQLLEGDPHSDYINANYIDGYHQPRHYIATQGPMQETVKDFWRMIWQENSPSVVMVTNLVEVGRVKCCRYWPDDTELYGDIKVTLVESEPLAEYVIRTFTVQKKGNHDIREIRQFHFTSWPDHGVPCFATGLLGFVRQVKFLNPNEVGPIIVHCSAGAGRTGCFIAIDIMLDMADSEGVVDVYNCIRELRSQRVNMVQTEEQYVFVHDAILEACLCGNTAIPVCEFRANFYNITKVDPQTNSSQIKDEFQTLNIVTPRVRAEDCSVGLLPRNHNKNRNMDVLPPDRCLPFLISVDGETSNYINAALMDSHKQPAAFIVTQHPLPNTVTDFWRLVFDYHCSAIVMLNELDAAQLCIQYWPEKSLCCYGPIQVEFISADFEEDIIVRVFRIYNMARPQDGYRIVQQFQFIGWPSYRDIPMSKRSFLKLIKRLEKWQEEYSGGDGRTVVHCFNGGGRSGTLCVVRSICEMIHQQNIIDVFHTVKTLRNNKSNMVDTLEQYKFCYDVALDYLCSF
SIO_010081: ptprt
subclass of: SO_0000673
so part of: ptprt
location: join(1024346..1024418,1185119..1185244,1260380..1260651,1262722..1262803,1276257..1276372,1285613..1285787,1309395..1309688,1410302..1410598,1419997..1420106,1424281..1424482,1429321..1429423,1451929..1452202,1479166..1479202,1492339..1492474,1513633..1513739,1517032..1517067,1534524..1534711,1550748..1550835,1552030..1552106,1554980..1555016,1577060..1577157,1586656..1586772,1588591..1588745,1590520..1590655,1596536..1596685,1599918..1600091,1601180..1601311,1603425..1603550,1607669..1607832,1608881..1609016,1610684..1610737)
location: region:1024346-1610737:1
so has part: feature:1024346-1024418:1:exon
so has part: feature:1185119-1185244:1:exon
so has part: feature:1260380-1260651:1:exon
so has part: feature:1262722-1262803:1:exon
so has part: feature:1276257-1276372:1:exon
so has part: feature:1285613-1285787:1:exon
so has part: feature:1309395-1309688:1:exon
so has part: feature:1410302-1410598:1:exon
so has part: feature:1419997-1420106:1:exon
so has part: feature:1424281-1424482:1:exon
so has part: feature:1429321-1429423:1:exon
so has part: feature:1451929-1452202:1:exon
so has part: feature:1479166-1479202:1:exon
so has part: feature:1492339-1492474:1:exon
so has part: feature:1513633-1513739:1:exon
so has part: feature:1517032-1517067:1:exon
so has part: feature:1534524-1534711:1:exon
so has part: feature:1550748-1550835:1:exon
so has part: feature:1552030-1552106:1:exon
so has part: feature:1554980-1555016:1:exon
so has part: feature:1577060-1577157:1:exon
so has part: feature:1586656-1586772:1:exon
so has part: feature:1588591-1588745:1:exon
so has part: feature:1590520-1590655:1:exon
so has part: feature:1596536-1596685:1:exon
so has part: feature:1599918-1600091:1:exon
so has part: feature:1601180-1601311:1:exon
so has part: feature:1603425-1603550:1:exon
so has part: feature:1607669-1607832:1:exon
so has part: feature:1608881-1609016:1:exon
so has part: feature:1610684-1610737:1:exon

XP_032897196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1024346-1024418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185119-1185244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260380-1260651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1262722-1262803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276257-1276372:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1285613-1285787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1309395-1309688:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1410302-1410598:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1419997-1420106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1424281-1424482:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1429321-1429423:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1451929-1452202:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1479166-1479202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1492339-1492474:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1513633-1513739:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1517032-1517067:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1534524-1534711:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1550748-1550835:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1552030-1552106:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1554980-1555016:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1577060-1577157:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1586656-1586772:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1588591-1588745:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1590520-1590655:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1596536-1596685:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1599918-1600091:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1601180-1601311:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1603425-1603550:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1607669-1607832:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1608881-1609016:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1610684-1610737:1:exon

soga1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: soga1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1669534..1739973
location: region:1669534-1739973:1
so has part: feature:1669534-1739973:1:exon
subclass of: SO_0000010

116986134
type: Gene
SIO_000068: ncbigene

position:1669534:1
position: 1669534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1739973:1
position: 1739973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1669534-1739973:1:exon

soga1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: soga1
product: suppressor of glucose, autophagy associated 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033041308.1
SIO_010081: soga1
subclass of: SO_0000673
so part of: soga1
location: join(1669534..1670824,1683106..1683330,1688782..1688940,1701412..1701474,1704234..1705523,1709965..1710111,1714202..1714327,1716810..1717040,1717711..1717875,1719624..1719791,1726615..1726866,1734204..1734274,1735625..1737077,1738118..1739973)
location: region:1669534-1739973:1
so has part: feature:1669534-1670824:1:exon
so has part: feature:1683106-1683330:1:exon
so has part: feature:1688782-1688940:1:exon
so has part: feature:1701412-1701474:1:exon
so has part: feature:1704234-1705523:1:exon
so has part: feature:1709965-1710111:1:exon
so has part: feature:1714202-1714327:1:exon
so has part: feature:1716810-1717040:1:exon
so has part: feature:1717711-1717875:1:exon
so has part: feature:1719624-1719791:1:exon
so has part: feature:1726615-1726866:1:exon
so has part: feature:1734204-1734274:1:exon
so has part: feature:1735625-1737077:1:exon
so has part: feature:1738118-1739973:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1669534-1670824:1:exon

position:1670824:1
position: 1670824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1683106-1683330:1:exon

position:1683106:1
position: 1683106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683330:1
position: 1683330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1688782-1688940:1:exon

position:1688782:1
position: 1688782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1688940:1
position: 1688940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1701412-1701474:1:exon

position:1701412:1
position: 1701412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1701474:1
position: 1701474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1704234-1705523:1:exon

position:1704234:1
position: 1704234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1705523:1
position: 1705523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1709965-1710111:1:exon

position:1709965:1
position: 1709965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1710111:1
position: 1710111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1714202-1714327:1:exon

position:1714202:1
position: 1714202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1714327:1
position: 1714327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1716810-1717040:1:exon

position:1716810:1
position: 1716810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1717040:1
position: 1717040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1717711-1717875:1:exon

position:1717711:1
position: 1717711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1717875:1
position: 1717875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1719624-1719791:1:exon

position:1719624:1
position: 1719624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1719791:1
position: 1719791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1726615-1726866:1:exon

position:1726615:1
position: 1726615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1726866:1
position: 1726866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1734204-1734274:1:exon

position:1734204:1
position: 1734204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1734274:1
position: 1734274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1735625-1737077:1:exon

position:1735625:1
position: 1735625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1737077:1
position: 1737077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1738118-1739973:1:exon

position:1738118:1
position: 1738118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

soga1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: soga1
product: suppressor of glucose, autophagy associated 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033041309.1
SIO_010081: soga1
subclass of: SO_0000673
so part of: soga1
location: join(1669534..1670824,1683106..1683330,1688782..1688940,1701412..1701474,1704234..1705523,1709965..1710111,1714202..1714327,1716810..1717040,1717711..1717875,1719624..1719791,1734204..1734274,1735625..1737077,1738118..1739973)
location: region:1669534-1739973:1
so has part: feature:1669534-1670824:1:exon
so has part: feature:1683106-1683330:1:exon
so has part: feature:1688782-1688940:1:exon
so has part: feature:1701412-1701474:1:exon
so has part: feature:1704234-1705523:1:exon
so has part: feature:1709965-1710111:1:exon
so has part: feature:1714202-1714327:1:exon
so has part: feature:1716810-1717040:1:exon
so has part: feature:1717711-1717875:1:exon
so has part: feature:1719624-1719791:1:exon
so has part: feature:1734204-1734274:1:exon
so has part: feature:1735625-1737077:1:exon
so has part: feature:1738118-1739973:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1669534-1670824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683106-1683330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1688782-1688940:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1701412-1701474:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1704234-1705523:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1709965-1710111:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1714202-1714327:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1716810-1717040:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1717711-1717875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1719624-1719791:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1734204-1734274:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1735625-1737077:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1738118-1739973:1:exon

soga1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: soga1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SOGA1 isoform X1
translation: MEAVNGTADSNQQQKKKMPGEKKKVHREPSPARPKPGVRGWSVGRVKGQCRLSRHGHGHGHSPGLKDTRPGASGKAASAGPGAEGARAELRGKKAPAAAASAAGGKKKKAAARWKSPRAQAHIHGLNPGPGRRWAAGATDSSSDLSAHTSDSEAPALTLPGPGSGSPGSGQSDSRLHLSNSLGFSDFSEEQLPDGGGGHEEEEMVKEMEELRSDNDYLKDEIEELRAEMLEMRDIYLEEDVYQLQELRQELDRANKTCRILQYRLRKTERRSLRAAQTGHVDGELIRSLEQDVKVSKDVSVRLHNELEAIGKKRIKLEVENEDLQQKLIEMDISKQVLLSEMDKMKESSLKKRNSRVTTKQEKKPLPQEDSADLKCQLHFAKEEAAVMCKKLTKLVKENESMKEDLVKYSSLYGDLDNVVSVGAFGESPHVREAELKLHLKLVEEEANILSRRTVELEVENRGLKAEMDELKGHCEKESLGQDVRLGMTSTSYSEFGENIGELRRQLQFVEEEAELLRRSLIELEDQNKHLMNELNRYKSECNQESTWSDSCPSLNEPSQEELMAARIQISDLNGKVKKLEYENRVLVSNLQRYDLASYQCQKCCKEFDTEISDSLDLSSSQPRREVPVGGENDLKETQERTSGSGSSRVTDHDDFTGRLLGTKDLDILFGIKDQAELVSEVIDLLISDTSGFVSDGKVCSSIDLSTQSFSESSEEATNVSDANLMSSINSRLLGLKNELTSVTEKIDQLSENIRDENRGLSPLPHLTESASFLSTLTSMSQDLPMDSVGKEYSTDLKQPEFRNQGDWQQDGSQSPDICSTNTKEYQESAKDCSIYSREESDCYATEVKELQLDLSEAKESIRGLQEQLAQERELRSEDSERFQQKMSQLKEEQQKALVRRDFELQSLNLQTKLEQKFWNQEKNLFVKEADQFKQNLFLLYMKLKWFLKHWKCGKKMDNDGDDLLEVNSVKDLYLLIEEEELNPRLVDNRMVTAEEQSQKTLEEALTLPAEKPFLASRPKQSNEYSRVVGDIKMILKDLCTELKEERRRTNELQLQFANAKSAWEIEKVELKSCVAQLEGRAGKLACDKAAGDLKTALKWEREEHQQLLAESYGAVMDLTQQLQISEKNWSQEKLELLDRFNNERSLSEQRLKEMQHKINQMLQHRNNIKETCDELEAKGTNLQRAKSVSSMSEFESLLDTSPYLPPTTGPASKSFKNLEELNIKNRKHAPHDDDSLYEKSEDRLIKQSTTEVPVISSWDFTMTANLVNPQLNKKQMQRSYTAPDRTGIRIYYSPPVLRRLDGSLVHSNDGKVVIEPGFLFTMARPKQTGDSERSENVCSRWFNNLSKHQELLKSGNGDRPVSVPTAAASGFTSALRDLQISGNMSDDMKEVANCVRNVICTNPLERTVNDTASQTAGVVSIGTQTTRNISVGLQTESPRSLSSSLHRSWASRGSLLMPTQSSRSKQLSSSLEKLPTKFERPCCSPKYGSPKLQRRSSSKIDHTRERSPWAMSQRGQNESAWARSTTTRDSPVLSSINDGLSSLFNVVEHASGSVDSIWKSSQHEAKTKGDTSRYGIVQEFFRNVCGRSQSPANGGDKPIKVPISDESVRKTDVTTPVAQTQVESVSRIVNKRLSKQPNKEDQKPPTPTPGQGPKDPDARDAGTSGLLEEASCDCTSQSLTSCFPSRSSARHSLSQCKSRSLPSDPNASDEKSG
SIO_010081: soga1
subclass of: SO_0000673
so part of: soga1
location: join(1670168..1670824,1683106..1683330,1688782..1688940,1701412..1701474,1704234..1705523,1709965..1710111,1714202..1714327,1716810..1717040,1717711..1717875,1719624..1719791,1726615..1726866,1734204..1734274,1735625..1737077,1738118..1738255)
location: region:1670168-1738255:1
so has part: feature:1670168-1670824:1:exon
so has part: feature:1683106-1683330:1:exon
so has part: feature:1688782-1688940:1:exon
so has part: feature:1701412-1701474:1:exon
so has part: feature:1704234-1705523:1:exon
so has part: feature:1709965-1710111:1:exon
so has part: feature:1714202-1714327:1:exon
so has part: feature:1716810-1717040:1:exon
so has part: feature:1717711-1717875:1:exon
so has part: feature:1719624-1719791:1:exon
so has part: feature:1726615-1726866:1:exon
so has part: feature:1734204-1734274:1:exon
so has part: feature:1735625-1737077:1:exon
so has part: feature:1738118-1738255:1:exon

XP_032897199.1
type: Protein
SIO_000068: ncbiprotein

position:1670168:1
position: 1670168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1738255:1
position: 1738255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1670168-1670824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683106-1683330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1688782-1688940:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1701412-1701474:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1704234-1705523:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1709965-1710111:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1714202-1714327:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1716810-1717040:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1717711-1717875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1719624-1719791:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1726615-1726866:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1734204-1734274:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1735625-1737077:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1738118-1738255:1:exon

soga1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: soga1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SOGA1 isoform X2
translation: MEAVNGTADSNQQQKKKMPGEKKKVHREPSPARPKPGVRGWSVGRVKGQCRLSRHGHGHGHSPGLKDTRPGASGKAASAGPGAEGARAELRGKKAPAAAASAAGGKKKKAAARWKSPRAQAHIHGLNPGPGRRWAAGATDSSSDLSAHTSDSEAPALTLPGPGSGSPGSGQSDSRLHLSNSLGFSDFSEEQLPDGGGGHEEEEMVKEMEELRSDNDYLKDEIEELRAEMLEMRDIYLEEDVYQLQELRQELDRANKTCRILQYRLRKTERRSLRAAQTGHVDGELIRSLEQDVKVSKDVSVRLHNELEAIGKKRIKLEVENEDLQQKLIEMDISKQVLLSEMDKMKESSLKKRNSRVTTKQEKKPLPQEDSADLKCQLHFAKEEAAVMCKKLTKLVKENESMKEDLVKYSSLYGDLDNVVSVGAFGESPHVREAELKLHLKLVEEEANILSRRTVELEVENRGLKAEMDELKGHCEKESLGQDVRLGMTSTSYSEFGENIGELRRQLQFVEEEAELLRRSLIELEDQNKHLMNELNRYKSECNQESTWSDSCPSLNEPSQEELMAARIQISDLNGKVKKLEYENRVLVSNLQRYDLASYQCQKCCKEFDTEISDSLDLSSSQPRREVPVGGENDLKETQERTSGSGSSRVTDHDDFTGRLLGTKDLDILFGIKDQAELVSEVIDLLISDTSGFVSDGKVCSSIDLSTQSFSESSEEATNVSDANLMSSINSRLLGLKNELTSVTEKIDQLSENIRDENRGLSPLPHLTESASFLSTLTSMSQDLPMDSVGKEYSTDLKQPEFRNQGDWQQDGSQSPDICSTNTKEYQESAKDCSIYSREESDCYATEVKELQLDLSEAKESIRGLQEQLAQERELRSEDSERFQQKMSQLKEEQQKALVRRDFELQSLNLQTKLEQKFWNQEKNLFVKEADQFKQNLFLLYMKLKWFLKHWKCGKKMDNDGDDLLEVNSVKDLYLLIEEEELNPRLVDNRMVTAEEQSQKTLEEALTLPAEKPFLASRPKQSNEYSRVVGDIKMILKDLCTELKEERRRTNELQLQFANAKSAWEIEKVELKSCVAQMLQHRNNIKETCDELEAKGTNLQRAKSVSSMSEFESLLDTSPYLPPTTGPASKSFKNLEELNIKNRKHAPHDDDSLYEKSEDRLIKQSTTEVPVISSWDFTMTANLVNPQLNKKQMQRSYTAPDRTGIRIYYSPPVLRRLDGSLVHSNDGKVVIEPGFLFTMARPKQTGDSERSENVCSRWFNNLSKHQELLKSGNGDRPVSVPTAAASGFTSALRDLQISGNMSDDMKEVANCVRNVICTNPLERTVNDTASQTAGVVSIGTQTTRNISVGLQTESPRSLSSSLHRSWASRGSLLMPTQSSRSKQLSSSLEKLPTKFERPCCSPKYGSPKLQRRSSSKIDHTRERSPWAMSQRGQNESAWARSTTTRDSPVLSSINDGLSSLFNVVEHASGSVDSIWKSSQHEAKTKGDTSRYGIVQEFFRNVCGRSQSPANGGDKPIKVPISDESVRKTDVTTPVAQTQVESVSRIVNKRLSKQPNKEDQKPPTPTPGQGPKDPDARDAGTSGLLEEASCDCTSQSLTSCFPSRSSARHSLSQCKSRSLPSDPNASDEKSG
SIO_010081: soga1
subclass of: SO_0000673
so part of: soga1
location: join(1670168..1670824,1683106..1683330,1688782..1688940,1701412..1701474,1704234..1705523,1709965..1710111,1714202..1714327,1716810..1717040,1717711..1717875,1719624..1719791,1734204..1734274,1735625..1737077,1738118..1738255)
location: region:1670168-1738255:1
so has part: feature:1670168-1670824:1:exon
so has part: feature:1683106-1683330:1:exon
so has part: feature:1688782-1688940:1:exon
so has part: feature:1701412-1701474:1:exon
so has part: feature:1704234-1705523:1:exon
so has part: feature:1709965-1710111:1:exon
so has part: feature:1714202-1714327:1:exon
so has part: feature:1716810-1717040:1:exon
so has part: feature:1717711-1717875:1:exon
so has part: feature:1719624-1719791:1:exon
so has part: feature:1734204-1734274:1:exon
so has part: feature:1735625-1737077:1:exon
so has part: feature:1738118-1738255:1:exon

XP_032897200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1670168-1670824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683106-1683330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1688782-1688940:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1701412-1701474:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1704234-1705523:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1709965-1710111:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1714202-1714327:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1716810-1717040:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1717711-1717875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1719624-1719791:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1734204-1734274:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1735625-1737077:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1738118-1738255:1:exon

c23h6orf226
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: c23h6orf226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1804724..1807081
location: region:1804724-1807081:1
so has part: feature:1804724-1807081:1:exon
subclass of: SO_0000010

116986136
type: Gene
SIO_000068: ncbigene

position:1804724:1
position: 1804724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1807081:1
position: 1807081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1804724-1807081:1:exon

c23h6orf226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: c23h6orf226
product: chromosome 23 C6orf226 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033041312.1
SIO_010081: c23h6orf226
subclass of: SO_0000673
so part of: c23h6orf226
location: join(1804724..1804952,1806319..1807081)
location: region:1804724-1807081:1
so has part: feature:1804724-1804952:1:exon
so has part: feature:1806319-1807081:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1804724-1804952:1:exon

position:1804952:1
position: 1804952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1806319-1807081:1:exon

position:1806319:1
position: 1806319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

c23h6orf226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: c23h6orf226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C6orf226 homolog
translation: MEAACRRFHSYDFAADRVFERGLRQLGEAARASGERLLETRIHYYSRFVEPIDLEDYKRWLSSQIADQSSNPTTEEMTDAFEKLLKQSSDGDSAALESINISHKQCTTQRTKMADAGVHVQFSKEIGGKVAYKPTEHSQNEQIHQNKAASYLADLATTTRTKGERCSLSFPQVLHLVQSGQEVPGIQKLNITSTNSVPTMSQLARKPKPWERN
SIO_010081: c23h6orf226
subclass of: SO_0000673
so part of: c23h6orf226
location: join(1804813..1804952,1806319..1806820)
location: region:1804813-1806820:1
so has part: feature:1804813-1804952:1:exon
so has part: feature:1806319-1806820:1:exon

XP_032897203.1
type: Protein
SIO_000068: ncbiprotein

position:1804813:1
position: 1804813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1806820:1
position: 1806820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1804813-1804952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1806319-1806820:1:exon

LOC116986135
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1808266..1848521)
location: region:1808266-1848521:-1
so has part: feature:1808266-1848521:-1:exon
subclass of: SO_0000010

116986135
type: Gene
SIO_000068: ncbigene

position:1808266:-1
position: 1808266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1848521:-1
position: 1848521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1808266-1848521:-1:exon

LOC116986135
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986135
product: acetyl-coenzyme A synthetase, cytoplasmic-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033041310.1
SIO_010081: LOC116986135
subclass of: SO_0000673
so part of: LOC116986135
location: complement(join(1808266..1809276,1809367..1809441,1812319..1812495,1816375..1816443,1817841..1817949,1820072..1820152,1821434..1821490,1823039..1823171,1823671..1823804,1824835..1825005,1827760..1827897,1831930..1831974,1832549..1832663,1834730..1834805,1835665..1835737,1837031..1837134,1839349..1839440,1846545..1846740,1848336..1848521))
location: region:1808266-1848521:-1
so has part: feature:1848336-1848521:-1:exon
so has part: feature:1846545-1846740:-1:exon
so has part: feature:1839349-1839440:-1:exon
so has part: feature:1837031-1837134:-1:exon
so has part: feature:1835665-1835737:-1:exon
so has part: feature:1834730-1834805:-1:exon
so has part: feature:1832549-1832663:-1:exon
so has part: feature:1831930-1831974:-1:exon
so has part: feature:1827760-1827897:-1:exon
so has part: feature:1824835-1825005:-1:exon
so has part: feature:1823671-1823804:-1:exon
so has part: feature:1823039-1823171:-1:exon
so has part: feature:1821434-1821490:-1:exon
so has part: feature:1820072-1820152:-1:exon
so has part: feature:1817841-1817949:-1:exon
so has part: feature:1816375-1816443:-1:exon
so has part: feature:1812319-1812495:-1:exon
so has part: feature:1809367-1809441:-1:exon
so has part: feature:1808266-1809276:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1848336-1848521:-1:exon

position:1848336:-1
position: 1848336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1846545-1846740:-1:exon

position:1846545:-1
position: 1846545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1846740:-1
position: 1846740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1839349-1839440:-1:exon

position:1839349:-1
position: 1839349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1839440:-1
position: 1839440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1837031-1837134:-1:exon

position:1837031:-1
position: 1837031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1837134:-1
position: 1837134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1835665-1835737:-1:exon

position:1835665:-1
position: 1835665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1835737:-1
position: 1835737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1834730-1834805:-1:exon

position:1834730:-1
position: 1834730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1834805:-1
position: 1834805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1832549-1832663:-1:exon

position:1832549:-1
position: 1832549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1832663:-1
position: 1832663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1831930-1831974:-1:exon

position:1831930:-1
position: 1831930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1831974:-1
position: 1831974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1827760-1827897:-1:exon

position:1827760:-1
position: 1827760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1827897:-1
position: 1827897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1824835-1825005:-1:exon

position:1824835:-1
position: 1824835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1825005:-1
position: 1825005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1823671-1823804:-1:exon

position:1823671:-1
position: 1823671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1823804:-1
position: 1823804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1823039-1823171:-1:exon

position:1823039:-1
position: 1823039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1823171:-1
position: 1823171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1821434-1821490:-1:exon

position:1821434:-1
position: 1821434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1821490:-1
position: 1821490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1820072-1820152:-1:exon

position:1820072:-1
position: 1820072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1820152:-1
position: 1820152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1817841-1817949:-1:exon

position:1817841:-1
position: 1817841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817949:-1
position: 1817949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1816375-1816443:-1:exon

position:1816375:-1
position: 1816375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1816443:-1
position: 1816443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1812319-1812495:-1:exon

position:1812319:-1
position: 1812319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1812495:-1
position: 1812495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1809367-1809441:-1:exon

position:1809367:-1
position: 1809367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1809441:-1
position: 1809441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1808266-1809276:-1:exon

position:1809276:-1
position: 1809276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116986135
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986135
product: acetyl-coenzyme A synthetase, cytoplasmic-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033041311.1
SIO_010081: LOC116986135
subclass of: SO_0000673
so part of: LOC116986135
location: complement(join(1808266..1809276,1809367..1809441,1812319..1812495,1816375..1816443,1817841..1817949,1820072..1820152,1821434..1821490,1823039..1823171,1823671..1823804,1824835..1825005,1827760..1827897,1832549..1832663,1834730..1834805,1835665..1835737,1837031..1837134,1839349..1839440,1846545..1846740,1848336..1848520))
location: region:1808266-1848520:-1
so has part: feature:1848336-1848520:-1:exon
so has part: feature:1846545-1846740:-1:exon
so has part: feature:1839349-1839440:-1:exon
so has part: feature:1837031-1837134:-1:exon
so has part: feature:1835665-1835737:-1:exon
so has part: feature:1834730-1834805:-1:exon
so has part: feature:1832549-1832663:-1:exon
so has part: feature:1827760-1827897:-1:exon
so has part: feature:1824835-1825005:-1:exon
so has part: feature:1823671-1823804:-1:exon
so has part: feature:1823039-1823171:-1:exon
so has part: feature:1821434-1821490:-1:exon
so has part: feature:1820072-1820152:-1:exon
so has part: feature:1817841-1817949:-1:exon
so has part: feature:1816375-1816443:-1:exon
so has part: feature:1812319-1812495:-1:exon
so has part: feature:1809367-1809441:-1:exon
so has part: feature:1808266-1809276:-1:exon

position:1848520:-1
position: 1848520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1848336-1848520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1846545-1846740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1839349-1839440:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1837031-1837134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1835665-1835737:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1834730-1834805:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1832549-1832663:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1827760-1827897:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1824835-1825005:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1823671-1823804:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1823039-1823171:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1821434-1821490:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1820072-1820152:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1817841-1817949:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1816375-1816443:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1812319-1812495:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1809367-1809441:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1808266-1809276:-1:exon

LOC116986135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetyl-coenzyme A synthetase, cytoplasmic-like isoform X2
translation: MIPDKTPVGGDTFHGAADLAQRAHVPSFQKYKELYLQSIQNPQEFWGKIAKDFYWKTPQTGSFLDYNFDHTKGKIFIKLMEGATTNICYNLLDRNVYEKKLGDKIAFYWEGNEPADSMEITYKELLQQVCKFANVLRAQGVKKGDGISIYMPMIMELVVAMLACARIGAVHSIVFAGFSSESLCERIVDSRCSFLVTADGFYRGNKLINLKLVVDEALRKCRERDFHVSKCIVVKHLGGTEETCADETSTNPQSPPAKRSCQIPWDANVDVWWHELMKGASDQCEPEWCDTEDPLFILYTSGSTGKPKGVLHTIGGYLLYTATTFKYVFNYQPDDVYWCTADIGWVTGHSYVTYGPLANGATSVMFEGLPTYPDPSRFWEIIDKYKVTTFYTAPTAIRLLMKYGDGPVKRFSRQSLKILGTVGEPINPEAWHWYYKVIGNGRCPIMDTFWQTETGGHMLTPLPVAIPLKPGSATFPFFGVVPAILNESGEELEGEAEGYLVFKKPWPSIMRTVYGNHERFEETYFKKFPGYFVTGDGCKRDKDGYYWITGRIDDMLNVSGHLLSTAEVESALIEHPAIAEAAVVSHPHHVKGECLYCFVTLRDGHEFTKTLVTELKNQVREKISPIATPDYIQNAPGLPKTRSGKIMRRILRKIARNEKDLGDISTLADESVVTELISNRCKTT
SIO_010081: LOC116986135
subclass of: SO_0000673
so part of: LOC116986135
location: complement(join(1809152..1809276,1809367..1809441,1812319..1812495,1816375..1816443,1817841..1817949,1820072..1820152,1821434..1821490,1823039..1823171,1823671..1823804,1824835..1825005,1827760..1827897,1832549..1832663,1834730..1834805,1835665..1835737,1837031..1837134,1839349..1839440,1846545..1846740,1848336..1848465))
location: region:1809152-1848465:-1
so has part: feature:1848336-1848465:-1:exon
so has part: feature:1846545-1846740:-1:exon
so has part: feature:1839349-1839440:-1:exon
so has part: feature:1837031-1837134:-1:exon
so has part: feature:1835665-1835737:-1:exon
so has part: feature:1834730-1834805:-1:exon
so has part: feature:1832549-1832663:-1:exon
so has part: feature:1827760-1827897:-1:exon
so has part: feature:1824835-1825005:-1:exon
so has part: feature:1823671-1823804:-1:exon
so has part: feature:1823039-1823171:-1:exon
so has part: feature:1821434-1821490:-1:exon
so has part: feature:1820072-1820152:-1:exon
so has part: feature:1817841-1817949:-1:exon
so has part: feature:1816375-1816443:-1:exon
so has part: feature:1812319-1812495:-1:exon
so has part: feature:1809367-1809441:-1:exon
so has part: feature:1809152-1809276:-1:exon

XP_032897202.1
type: Protein
SIO_000068: ncbiprotein

position:1809152:-1
position: 1809152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1848465:-1
position: 1848465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1848336-1848465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1846545-1846740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1839349-1839440:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1837031-1837134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1835665-1835737:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1834730-1834805:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1832549-1832663:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1827760-1827897:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1824835-1825005:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1823671-1823804:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1823039-1823171:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1821434-1821490:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1820072-1820152:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1817841-1817949:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1816375-1816443:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1812319-1812495:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1809367-1809441:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1809152-1809276:-1:exon

LOC116986135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetyl-coenzyme A synthetase, cytoplasmic-like isoform X1
translation: MIPDKTPVGGDTFHGAADLAQRAHVPSFQKYKELYLQSIQNPQEFWGKIAKDFYWKTPQTGSFLDYNFDHTKGKIFIKLMEGATTNICYNLLDRNVYEKKLGDKIAFYWEGNEPADSMEITYKELLQQVCKFANVLRAQGVKKGDGISIYMPMIMELVVAMLACARIGAVHSIVFAGFSSESLCERIVDSRCSFLVTADGFYRGNKLINLKLVVDEALRKCRERDFHVSKCIVVKHLGGTEETCADETSTNPQSPPAKRSCQDKDNKKTKNSHRKIQIPWDANVDVWWHELMKGASDQCEPEWCDTEDPLFILYTSGSTGKPKGVLHTIGGYLLYTATTFKYVFNYQPDDVYWCTADIGWVTGHSYVTYGPLANGATSVMFEGLPTYPDPSRFWEIIDKYKVTTFYTAPTAIRLLMKYGDGPVKRFSRQSLKILGTVGEPINPEAWHWYYKVIGNGRCPIMDTFWQTETGGHMLTPLPVAIPLKPGSATFPFFGVVPAILNESGEELEGEAEGYLVFKKPWPSIMRTVYGNHERFEETYFKKFPGYFVTGDGCKRDKDGYYWITGRIDDMLNVSGHLLSTAEVESALIEHPAIAEAAVVSHPHHVKGECLYCFVTLRDGHEFTKTLVTELKNQVREKISPIATPDYIQNAPGLPKTRSGKIMRRILRKIARNEKDLGDISTLADESVVTELISNRCKTT
SIO_010081: LOC116986135
subclass of: SO_0000673
so part of: LOC116986135
location: complement(join(1809152..1809276,1809367..1809441,1812319..1812495,1816375..1816443,1817841..1817949,1820072..1820152,1821434..1821490,1823039..1823171,1823671..1823804,1824835..1825005,1827760..1827897,1831930..1831974,1832549..1832663,1834730..1834805,1835665..1835737,1837031..1837134,1839349..1839440,1846545..1846740,1848336..1848465))
location: region:1809152-1848465:-1
so has part: feature:1848336-1848465:-1:exon
so has part: feature:1846545-1846740:-1:exon
so has part: feature:1839349-1839440:-1:exon
so has part: feature:1837031-1837134:-1:exon
so has part: feature:1835665-1835737:-1:exon
so has part: feature:1834730-1834805:-1:exon
so has part: feature:1832549-1832663:-1:exon
so has part: feature:1831930-1831974:-1:exon
so has part: feature:1827760-1827897:-1:exon
so has part: feature:1824835-1825005:-1:exon
so has part: feature:1823671-1823804:-1:exon
so has part: feature:1823039-1823171:-1:exon
so has part: feature:1821434-1821490:-1:exon
so has part: feature:1820072-1820152:-1:exon
so has part: feature:1817841-1817949:-1:exon
so has part: feature:1816375-1816443:-1:exon
so has part: feature:1812319-1812495:-1:exon
so has part: feature:1809367-1809441:-1:exon
so has part: feature:1809152-1809276:-1:exon

XP_032897201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1848336-1848465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1846545-1846740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1839349-1839440:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1837031-1837134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1835665-1835737:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1834730-1834805:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1832549-1832663:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1831930-1831974:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1827760-1827897:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1824835-1825005:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1823671-1823804:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1823039-1823171:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1821434-1821490:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1820072-1820152:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1817841-1817949:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1816375-1816443:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1812319-1812495:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1809367-1809441:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1809152-1809276:-1:exon

mapre1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: mapre1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1856047..1897427)
location: region:1856047-1897427:-1
so has part: feature:1856047-1897427:-1:exon
subclass of: SO_0000010

116986137
type: Gene
SIO_000068: ncbigene

position:1856047:-1
position: 1856047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1897427:-1
position: 1897427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1856047-1897427:-1:exon

mapre1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: mapre1
product: microtubule associated protein RP/EB family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033041313.1
SIO_010081: mapre1
subclass of: SO_0000673
so part of: mapre1
location: complement(join(1856047..1857228,1858513..1858665,1859928..1860049,1863371..1863578,1865539..1865684,1870906..1871037,1897295..1897427))
location: region:1856047-1897427:-1
so has part: feature:1897295-1897427:-1:exon
so has part: feature:1870906-1871037:-1:exon
so has part: feature:1865539-1865684:-1:exon
so has part: feature:1863371-1863578:-1:exon
so has part: feature:1859928-1860049:-1:exon
so has part: feature:1858513-1858665:-1:exon
so has part: feature:1856047-1857228:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1897295-1897427:-1:exon

position:1897295:-1
position: 1897295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1870906-1871037:-1:exon

position:1870906:-1
position: 1870906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1871037:-1
position: 1871037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1865539-1865684:-1:exon

position:1865539:-1
position: 1865539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1865684:-1
position: 1865684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1863371-1863578:-1:exon

position:1863371:-1
position: 1863371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1863578:-1
position: 1863578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1859928-1860049:-1:exon

position:1859928:-1
position: 1859928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1860049:-1
position: 1860049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1858513-1858665:-1:exon

position:1858513:-1
position: 1858513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858665:-1
position: 1858665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1856047-1857228:-1:exon

position:1857228:-1
position: 1857228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mapre1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: mapre1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein RP/EB family member 1
translation: MAVNVYSTSVTSDNLSRHDMLAWINDSLQLSFTKVEQLCSGSAFCQFMDMLFPGCVGLKKVKFQAKLEHEYIHNFKLLQAAFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDGKDYDPILARQGQDAAPPLNHGDQPLNKPKKTLGTASTVTQKVYPTPKVSATPKPVLTVSKRPAMVGNGDAQVAELAQQIHALKITVEDLEKERDFYFGKLRNIELICQENEQDNDPVMQRIVEILYATDEGFAVPDVADEQPEEQEEY
SIO_010081: mapre1
subclass of: SO_0000673
so part of: mapre1
location: complement(join(1857169..1857228,1858513..1858665,1859928..1860049,1863371..1863578,1865539..1865684,1870906..1871026))
location: region:1857169-1871026:-1
so has part: feature:1870906-1871026:-1:exon
so has part: feature:1865539-1865684:-1:exon
so has part: feature:1863371-1863578:-1:exon
so has part: feature:1859928-1860049:-1:exon
so has part: feature:1858513-1858665:-1:exon
so has part: feature:1857169-1857228:-1:exon

XP_032897204.1
type: Protein
SIO_000068: ncbiprotein

position:1857169:-1
position: 1857169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1871026:-1
position: 1871026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1870906-1871026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1865539-1865684:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1863371-1863578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1859928-1860049:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1858513-1858665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1857169-1857228:-1:exon

LOC116986138
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1904398..2008505)
location: region:1904398-2008505:-1
so has part: feature:1904398-2008505:-1:exon
subclass of: SO_0000010

116986138
type: Gene
SIO_000068: ncbigene

position:1904398:-1
position: 1904398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2008505:-1
position: 2008505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1904398-2008505:-1:exon

LOC116986138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986138
product: DNA (cytosine-5)-methyltransferase 3B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033041316.1
SIO_010081: LOC116986138
subclass of: SO_0000673
so part of: LOC116986138
location: complement(join(1904398..1908673,1914796..1914914,1916677..1916746,1922104..1922189,1923977..1924125,1931308..1931398,1932503..1932648,1935092..1935176,1936012..1936195,1937441..1937553,1940214..1940293,1941538..1941582,1941975..1942100,1942720..1942861,1944883..1944990,1945166..1945324,1945715..1945882,1977125..1977225,1982760..1982871,1992673..1992749,2008336..2008505))
location: region:1904398-2008505:-1
so has part: feature:2008336-2008505:-1:exon
so has part: feature:1992673-1992749:-1:exon
so has part: feature:1982760-1982871:-1:exon
so has part: feature:1977125-1977225:-1:exon
so has part: feature:1945715-1945882:-1:exon
so has part: feature:1945166-1945324:-1:exon
so has part: feature:1944883-1944990:-1:exon
so has part: feature:1942720-1942861:-1:exon
so has part: feature:1941975-1942100:-1:exon
so has part: feature:1941538-1941582:-1:exon
so has part: feature:1940214-1940293:-1:exon
so has part: feature:1937441-1937553:-1:exon
so has part: feature:1936012-1936195:-1:exon
so has part: feature:1935092-1935176:-1:exon
so has part: feature:1932503-1932648:-1:exon
so has part: feature:1931308-1931398:-1:exon
so has part: feature:1923977-1924125:-1:exon
so has part: feature:1922104-1922189:-1:exon
so has part: feature:1916677-1916746:-1:exon
so has part: feature:1914796-1914914:-1:exon
so has part: feature:1904398-1908673:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2008336-2008505:-1:exon

position:2008336:-1
position: 2008336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1992673-1992749:-1:exon

position:1992673:-1
position: 1992673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1992749:-1
position: 1992749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1982760-1982871:-1:exon

position:1982760:-1
position: 1982760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1982871:-1
position: 1982871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1977125-1977225:-1:exon

position:1977125:-1
position: 1977125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1977225:-1
position: 1977225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1945715-1945882:-1:exon

position:1945715:-1
position: 1945715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1945882:-1
position: 1945882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1945166-1945324:-1:exon

position:1945166:-1
position: 1945166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1945324:-1
position: 1945324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1944883-1944990:-1:exon

position:1944883:-1
position: 1944883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1944990:-1
position: 1944990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1942720-1942861:-1:exon

position:1942720:-1
position: 1942720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1942861:-1
position: 1942861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1941975-1942100:-1:exon

position:1941975:-1
position: 1941975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1942100:-1
position: 1942100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1941538-1941582:-1:exon

position:1941538:-1
position: 1941538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1941582:-1
position: 1941582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1940214-1940293:-1:exon

position:1940214:-1
position: 1940214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1940293:-1
position: 1940293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1937441-1937553:-1:exon

position:1937441:-1
position: 1937441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1937553:-1
position: 1937553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1936012-1936195:-1:exon

position:1936012:-1
position: 1936012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1936195:-1
position: 1936195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1935092-1935176:-1:exon

position:1935092:-1
position: 1935092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1935176:-1
position: 1935176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1932503-1932648:-1:exon

position:1932503:-1
position: 1932503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1932648:-1
position: 1932648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1931308-1931398:-1:exon

position:1931308:-1
position: 1931308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1931398:-1
position: 1931398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1923977-1924125:-1:exon

position:1923977:-1
position: 1923977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1924125:-1
position: 1924125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1922104-1922189:-1:exon

position:1922104:-1
position: 1922104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1922189:-1
position: 1922189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1916677-1916746:-1:exon

position:1916677:-1
position: 1916677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1916746:-1
position: 1916746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1914796-1914914:-1:exon

position:1914796:-1
position: 1914796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1914914:-1
position: 1914914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1904398-1908673:-1:exon

position:1908673:-1
position: 1908673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116986138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986138
product: DNA (cytosine-5)-methyltransferase 3B-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_033041317.1
SIO_010081: LOC116986138
subclass of: SO_0000673
so part of: LOC116986138
location: complement(join(1904398..1908673,1922104..1922189,1923977..1924125,1931308..1931398,1932503..1932648,1935092..1935176,1936012..1936195,1937441..1937553,1940214..1940293,1941538..1941582,1941975..1942100,1942720..1942861,1944883..1944990,1945166..1945324,1945715..1945882,1962588..1962737,1977125..1977225,1982760..1982871,1992673..1992749,2008336..2008505))
location: region:1904398-2008505:-1
so has part: feature:2008336-2008505:-1:exon
so has part: feature:1992673-1992749:-1:exon
so has part: feature:1982760-1982871:-1:exon
so has part: feature:1977125-1977225:-1:exon
so has part: feature:1962588-1962737:-1:exon
so has part: feature:1945715-1945882:-1:exon
so has part: feature:1945166-1945324:-1:exon
so has part: feature:1944883-1944990:-1:exon
so has part: feature:1942720-1942861:-1:exon
so has part: feature:1941975-1942100:-1:exon
so has part: feature:1941538-1941582:-1:exon
so has part: feature:1940214-1940293:-1:exon
so has part: feature:1937441-1937553:-1:exon
so has part: feature:1936012-1936195:-1:exon
so has part: feature:1935092-1935176:-1:exon
so has part: feature:1932503-1932648:-1:exon
so has part: feature:1931308-1931398:-1:exon
so has part: feature:1923977-1924125:-1:exon
so has part: feature:1922104-1922189:-1:exon
so has part: feature:1904398-1908673:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2008336-2008505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1992673-1992749:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1982760-1982871:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1977125-1977225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1962588-1962737:-1:exon

position:1962588:-1
position: 1962588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1962737:-1
position: 1962737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1945715-1945882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1945166-1945324:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1944883-1944990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1942720-1942861:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1941975-1942100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1941538-1941582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1940214-1940293:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1937441-1937553:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1936012-1936195:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1935092-1935176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1932503-1932648:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1931308-1931398:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1923977-1924125:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1922104-1922189:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1904398-1908673:-1:exon

LOC116986138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986138
product: DNA (cytosine-5)-methyltransferase 3B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033041314.1
SIO_010081: LOC116986138
subclass of: SO_0000673
so part of: LOC116986138
location: complement(join(1904398..1908673,1914796..1914914,1916677..1916746,1922104..1922189,1923977..1924125,1931308..1931398,1932503..1932648,1935092..1935176,1936012..1936195,1937441..1937553,1940214..1940293,1941538..1941582,1941975..1942100,1942720..1942861,1944883..1944990,1945166..1945324,1945715..1945882,1962588..1962737,1977125..1977225,1982760..1982871,1992673..1992749,2008336..2008505))
location: region:1904398-2008505:-1
so has part: feature:2008336-2008505:-1:exon
so has part: feature:1992673-1992749:-1:exon
so has part: feature:1982760-1982871:-1:exon
so has part: feature:1977125-1977225:-1:exon
so has part: feature:1962588-1962737:-1:exon
so has part: feature:1945715-1945882:-1:exon
so has part: feature:1945166-1945324:-1:exon
so has part: feature:1944883-1944990:-1:exon
so has part: feature:1942720-1942861:-1:exon
so has part: feature:1941975-1942100:-1:exon
so has part: feature:1941538-1941582:-1:exon
so has part: feature:1940214-1940293:-1:exon
so has part: feature:1937441-1937553:-1:exon
so has part: feature:1936012-1936195:-1:exon
so has part: feature:1935092-1935176:-1:exon
so has part: feature:1932503-1932648:-1:exon
so has part: feature:1931308-1931398:-1:exon
so has part: feature:1923977-1924125:-1:exon
so has part: feature:1922104-1922189:-1:exon
so has part: feature:1916677-1916746:-1:exon
so has part: feature:1914796-1914914:-1:exon
so has part: feature:1904398-1908673:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2008336-2008505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1992673-1992749:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1982760-1982871:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1977125-1977225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1962588-1962737:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1945715-1945882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1945166-1945324:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1944883-1944990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1942720-1942861:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1941975-1942100:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1941538-1941582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1940214-1940293:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1937441-1937553:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1936012-1936195:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1935092-1935176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1932503-1932648:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1931308-1931398:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1923977-1924125:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1922104-1922189:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1916677-1916746:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1914796-1914914:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1904398-1908673:-1:exon

LOC116986138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA (cytosine-5)-methyltransferase 3B-like isoform X2
translation: MKSNDCNSETAGDISKLEPVVNGETHQLDQWEQATTSSSQSPSPNPTQSGTDSTADSDMEILSSESSLGKKLDDGRPKGKSRCQEDSEESQKTRTSASKALITENSVIDLTLEPLDSSKKPPVPAESFACENSIVKGTDGIPQYQDGKGYGIGELVWGKIKGFSWWPAIVVSWRTPGRRQAASGMRWLQWFGDGKFSEVSADKLMPLTAIGQYFHTSAFNKLISYKRAVYQALEIASSRSGIPFPSNDRGTLEEQIKPMLDWAFAGFLPKGYEGIKPKQNTENDTADGTPVEVCVPEYYPPTKKQKTSLYKSKEGPEEEHRGREKIFFQVTSNNKSIEEFCLACGSIRIGTFHPLFEGGLCSICKDIYLETSYMYDDDGYQSYCTVCCGGREVLLCGNANCCRCFCVDCIDILVGPGASEEAKVLDPWRCYMCLPHESYGVLRRRGDWTMKLQEFFASDNGQEYDPPKIYPAVPAENRKPIKVLSLFDGIATGYLVLRDLGFKVERYVASEICEDSIAVGTVRHEGRITYVHDVRNISRQNIHEWGPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDTRPKEWEDRPFFWLFENVVAMGVNDKRDISRFLECNPVMIDAIDVSAAHRARYFWGNLPGMNRPLVASSADKLELQHCLEHGRIAKFSKVRTITTRSNSIKQGKDQHFPVIMNGKEDILWCTELERIFGFPVHYTDVSNMGRGARQKLLGRSWSVPVIRHLFAPLKDYFACE
SIO_010081: LOC116986138
subclass of: SO_0000673
so part of: LOC116986138
location: complement(join(1908532..1908673,1914796..1914914,1916677..1916746,1922104..1922189,1923977..1924125,1931308..1931398,1932503..1932648,1935092..1935176,1936012..1936195,1937441..1937553,1940214..1940293,1941538..1941582,1941975..1942100,1942720..1942861,1944883..1944990,1945166..1945324,1945715..1945882,1977125..1977225,1982760..1982871,1992673..1992726))
location: region:1908532-1992726:-1
so has part: feature:1992673-1992726:-1:exon
so has part: feature:1982760-1982871:-1:exon
so has part: feature:1977125-1977225:-1:exon
so has part: feature:1945715-1945882:-1:exon
so has part: feature:1945166-1945324:-1:exon
so has part: feature:1944883-1944990:-1:exon
so has part: feature:1942720-1942861:-1:exon
so has part: feature:1941975-1942100:-1:exon
so has part: feature:1941538-1941582:-1:exon
so has part: feature:1940214-1940293:-1:exon
so has part: feature:1937441-1937553:-1:exon
so has part: feature:1936012-1936195:-1:exon
so has part: feature:1935092-1935176:-1:exon
so has part: feature:1932503-1932648:-1:exon
so has part: feature:1931308-1931398:-1:exon
so has part: feature:1923977-1924125:-1:exon
so has part: feature:1922104-1922189:-1:exon
so has part: feature:1916677-1916746:-1:exon
so has part: feature:1914796-1914914:-1:exon
so has part: feature:1908532-1908673:-1:exon

XP_032897207.1
type: Protein
SIO_000068: ncbiprotein

position:1908532:-1
position: 1908532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1992726:-1
position: 1992726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1992673-1992726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1982760-1982871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1977125-1977225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1945715-1945882:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1945166-1945324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1944883-1944990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1942720-1942861:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1941975-1942100:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1941538-1941582:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1940214-1940293:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1937441-1937553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1936012-1936195:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1935092-1935176:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1932503-1932648:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1931308-1931398:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1923977-1924125:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1922104-1922189:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1916677-1916746:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1914796-1914914:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1908532-1908673:-1:exon

LOC116986138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA (cytosine-5)-methyltransferase 3B-like isoform X3
translation: MKSNDCNSETAGDISKLEPVVNGETHQLDQWEQATTSSSQSPSPNPTQSGTDSTADSDMEILSSESSLGKKLDDGRPKGKSRCQEDSEEAKRRGVSGWESSLRQRPAPRIIFQAGISFRHKKKKEDNNMKLKKDMNNSLSQKTRTSASKALITENSVIDLTLEPLDSSKKPPVPAESFACENSIVKGTDGIPQYQDGKGYGIGELVWGKIKGFSWWPAIVVSWRTPGRRQAASGMRWLQWFGDGKFSEVSADKLMPLTAIGQYFHTSAFNKLISYKRAVYQALEIASSRSGIPFPSNDRGTLEEQIKPMLDWAFAGFLPKGYEGIKPKQNTENDTADGTPVEVCVPEYYPPTKKQKTSLYKSKEGPEEEHRGREKIFFQVTSNNKSIEEFCLACGSIRIGTFHPLFEGGLCSICKDIYLETSYMYDDDGYQSYCTVCCGGREVLLCGNANCCRCFCVDCIDILVGPGASEEAKVLDPWRCYMCLPHESYGVLRRRGDWTMKLQEFFASDNGQEYDPPKIYPAVPAENRKPIKVLSLFDGIATGYLVLRDLGFKVERYVASEICEDSIAVGTVRHEGRITYVHDVRNISRQNIHEWGPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDTRPKEWEDRPFFWLFENVVAMGVNDKRDISRFLECNPVMIDAIDVSAAHRARYFWGNLPGMNRIFGFPVHYTDVSNMGRGARQKLLGRSWSVPVIRHLFAPLKDYFACE
SIO_010081: LOC116986138
subclass of: SO_0000673
so part of: LOC116986138
location: complement(join(1908532..1908673,1922104..1922189,1923977..1924125,1931308..1931398,1932503..1932648,1935092..1935176,1936012..1936195,1937441..1937553,1940214..1940293,1941538..1941582,1941975..1942100,1942720..1942861,1944883..1944990,1945166..1945324,1945715..1945882,1962588..1962737,1977125..1977225,1982760..1982871,1992673..1992726))
location: region:1908532-1992726:-1
so has part: feature:1992673-1992726:-1:exon
so has part: feature:1982760-1982871:-1:exon
so has part: feature:1977125-1977225:-1:exon
so has part: feature:1962588-1962737:-1:exon
so has part: feature:1945715-1945882:-1:exon
so has part: feature:1945166-1945324:-1:exon
so has part: feature:1944883-1944990:-1:exon
so has part: feature:1942720-1942861:-1:exon
so has part: feature:1941975-1942100:-1:exon
so has part: feature:1941538-1941582:-1:exon
so has part: feature:1940214-1940293:-1:exon
so has part: feature:1937441-1937553:-1:exon
so has part: feature:1936012-1936195:-1:exon
so has part: feature:1935092-1935176:-1:exon
so has part: feature:1932503-1932648:-1:exon
so has part: feature:1931308-1931398:-1:exon
so has part: feature:1923977-1924125:-1:exon
so has part: feature:1922104-1922189:-1:exon
so has part: feature:1908532-1908673:-1:exon

XP_032897208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1992673-1992726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1982760-1982871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1977125-1977225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1962588-1962737:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1945715-1945882:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1945166-1945324:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1944883-1944990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1942720-1942861:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1941975-1942100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1941538-1941582:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1940214-1940293:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1937441-1937553:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1936012-1936195:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1935092-1935176:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1932503-1932648:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1931308-1931398:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1923977-1924125:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1922104-1922189:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1908532-1908673:-1:exon

LOC116986138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA (cytosine-5)-methyltransferase 3A-like isoform X1
translation: MKSNDCNSETAGDISKLEPVVNGETHQLDQWEQATTSSSQSPSPNPTQSGTDSTADSDMEILSSESSLGKKLDDGRPKGKSRCQEDSEEAKRRGVSGWESSLRQRPAPRIIFQAGISFRHKKKKEDNNMKLKKDMNNSLSQKTRTSASKALITENSVIDLTLEPLDSSKKPPVPAESFACENSIVKGTDGIPQYQDGKGYGIGELVWGKIKGFSWWPAIVVSWRTPGRRQAASGMRWLQWFGDGKFSEVSADKLMPLTAIGQYFHTSAFNKLISYKRAVYQALEIASSRSGIPFPSNDRGTLEEQIKPMLDWAFAGFLPKGYEGIKPKQNTENDTADGTPVEVCVPEYYPPTKKQKTSLYKSKEGPEEEHRGREKIFFQVTSNNKSIEEFCLACGSIRIGTFHPLFEGGLCSICKDIYLETSYMYDDDGYQSYCTVCCGGREVLLCGNANCCRCFCVDCIDILVGPGASEEAKVLDPWRCYMCLPHESYGVLRRRGDWTMKLQEFFASDNGQEYDPPKIYPAVPAENRKPIKVLSLFDGIATGYLVLRDLGFKVERYVASEICEDSIAVGTVRHEGRITYVHDVRNISRQNIHEWGPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDTRPKEWEDRPFFWLFENVVAMGVNDKRDISRFLECNPVMIDAIDVSAAHRARYFWGNLPGMNRPLVASSADKLELQHCLEHGRIAKFSKVRTITTRSNSIKQGKDQHFPVIMNGKEDILWCTELERIFGFPVHYTDVSNMGRGARQKLLGRSWSVPVIRHLFAPLKDYFACE
SIO_010081: LOC116986138
subclass of: SO_0000673
so part of: LOC116986138
location: complement(join(1908532..1908673,1914796..1914914,1916677..1916746,1922104..1922189,1923977..1924125,1931308..1931398,1932503..1932648,1935092..1935176,1936012..1936195,1937441..1937553,1940214..1940293,1941538..1941582,1941975..1942100,1942720..1942861,1944883..1944990,1945166..1945324,1945715..1945882,1962588..1962737,1977125..1977225,1982760..1982871,1992673..1992726))
location: region:1908532-1992726:-1
so has part: feature:1992673-1992726:-1:exon
so has part: feature:1982760-1982871:-1:exon
so has part: feature:1977125-1977225:-1:exon
so has part: feature:1962588-1962737:-1:exon
so has part: feature:1945715-1945882:-1:exon
so has part: feature:1945166-1945324:-1:exon
so has part: feature:1944883-1944990:-1:exon
so has part: feature:1942720-1942861:-1:exon
so has part: feature:1941975-1942100:-1:exon
so has part: feature:1941538-1941582:-1:exon
so has part: feature:1940214-1940293:-1:exon
so has part: feature:1937441-1937553:-1:exon
so has part: feature:1936012-1936195:-1:exon
so has part: feature:1935092-1935176:-1:exon
so has part: feature:1932503-1932648:-1:exon
so has part: feature:1931308-1931398:-1:exon
so has part: feature:1923977-1924125:-1:exon
so has part: feature:1922104-1922189:-1:exon
so has part: feature:1916677-1916746:-1:exon
so has part: feature:1914796-1914914:-1:exon
so has part: feature:1908532-1908673:-1:exon

XP_032897205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1992673-1992726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1982760-1982871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1977125-1977225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1962588-1962737:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1945715-1945882:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1945166-1945324:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1944883-1944990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1942720-1942861:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1941975-1942100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1941538-1941582:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1940214-1940293:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1937441-1937553:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1936012-1936195:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1935092-1935176:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1932503-1932648:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1931308-1931398:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1923977-1924125:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1922104-1922189:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1916677-1916746:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1914796-1914914:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1908532-1908673:-1:exon

commd7
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: commd7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2008725..2024341
location: region:2008725-2024341:1
so has part: feature:2008725-2024341:1:exon
subclass of: SO_0000010

116986139
type: Gene
SIO_000068: ncbigene

position:2008725:1
position: 2008725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024341:1
position: 2024341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2008725-2024341:1:exon

commd7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: commd7
product: COMM domain containing 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033041318.1
SIO_010081: commd7
subclass of: SO_0000673
so part of: commd7
location: join(2008725..2008806,2008994..2009117,2011505..2011558,2012878..2012980,2017146..2017202,2017971..2018008,2021608..2021698,2022120..2022169,2023838..2023886,2023988..2024181,2024228..2024341)
location: region:2008725-2024341:1
so has part: feature:2008725-2008806:1:exon
so has part: feature:2008994-2009117:1:exon
so has part: feature:2011505-2011558:1:exon
so has part: feature:2012878-2012980:1:exon
so has part: feature:2017146-2017202:1:exon
so has part: feature:2017971-2018008:1:exon
so has part: feature:2021608-2021698:1:exon
so has part: feature:2022120-2022169:1:exon
so has part: feature:2023838-2023886:1:exon
so has part: feature:2023988-2024181:1:exon
so has part: feature:2024228-2024341:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2008725-2008806:1:exon

position:2008806:1
position: 2008806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2008994-2009117:1:exon

position:2008994:1
position: 2008994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2009117:1
position: 2009117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2011505-2011558:1:exon

position:2011505:1
position: 2011505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2011558:1
position: 2011558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2012878-2012980:1:exon

position:2012878:1
position: 2012878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2012980:1
position: 2012980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2017146-2017202:1:exon

position:2017146:1
position: 2017146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2017202:1
position: 2017202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2017971-2018008:1:exon

position:2017971:1
position: 2017971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2018008:1
position: 2018008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2021608-2021698:1:exon

position:2021608:1
position: 2021608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2021698:1
position: 2021698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2022120-2022169:1:exon

position:2022120:1
position: 2022120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2022169:1
position: 2022169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2023838-2023886:1:exon

position:2023838:1
position: 2023838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2023886:1
position: 2023886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2023988-2024181:1:exon

position:2023988:1
position: 2023988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024181:1
position: 2024181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2024228-2024341:1:exon

position:2024228:1
position: 2024228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

commd7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: commd7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COMM domain-containing protein 7
translation: MQRLHYSGEPVADAVSTDIQTLNKFSDQQFAALTEILFRFVTEPTESERLLNELGEFASQNGMSLGPLKNIVKSALLVPNGALKRNLTAEHVKADFIALGLGEEKAGCFADQWKLHSAALSRQALGQTIAVNQLVDMEWKFGVTAGSSELQKVGGIFLQLKLVIKKGNKSEIIYMELTLPQFYNFLHEMEQAKTSLECFG
SIO_010081: commd7
subclass of: SO_0000673
so part of: commd7
location: join(2009034..2009117,2011505..2011558,2012878..2012980,2017146..2017202,2017971..2018008,2021608..2021698,2022120..2022169,2023838..2023886,2023988..2024064)
location: region:2009034-2024064:1
so has part: feature:2009034-2009117:1:exon
so has part: feature:2011505-2011558:1:exon
so has part: feature:2012878-2012980:1:exon
so has part: feature:2017146-2017202:1:exon
so has part: feature:2017971-2018008:1:exon
so has part: feature:2021608-2021698:1:exon
so has part: feature:2022120-2022169:1:exon
so has part: feature:2023838-2023886:1:exon
so has part: feature:2023988-2024064:1:exon

XP_032897209.1
type: Protein
SIO_000068: ncbiprotein

position:2009034:1
position: 2009034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024064:1
position: 2024064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2009034-2009117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2011505-2011558:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2012878-2012980:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2017146-2017202:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2017971-2018008:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2021608-2021698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2022120-2022169:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2023838-2023886:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2023988-2024064:1:exon

LOC116986140
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2060312..2221953
location: region:2060312-2221953:1
so has part: feature:2060312-2221953:1:exon
subclass of: SO_0000010

116986140
type: Gene
SIO_000068: ncbigene

position:2060312:1
position: 2060312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2221953:1
position: 2221953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2060312-2221953:1:exon

LOC116986140
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986140
product: nucleolar protein 4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033041319.1
SIO_010081: LOC116986140
subclass of: SO_0000673
so part of: LOC116986140
location: join(2060312..2060654,2094361..2094516,2101635..2101746,2101854..2101963,2119288..2119429,2189546..2189841,2199667..2199849,2203271..2203462,2205518..2205676,2212001..2212123,2212565..2212751,2219876..2221953)
location: region:2060312-2221953:1
so has part: feature:2060312-2060654:1:exon
so has part: feature:2094361-2094516:1:exon
so has part: feature:2101635-2101746:1:exon
so has part: feature:2101854-2101963:1:exon
so has part: feature:2119288-2119429:1:exon
so has part: feature:2189546-2189841:1:exon
so has part: feature:2199667-2199849:1:exon
so has part: feature:2203271-2203462:1:exon
so has part: feature:2205518-2205676:1:exon
so has part: feature:2212001-2212123:1:exon
so has part: feature:2212565-2212751:1:exon
so has part: feature:2219876-2221953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2060312-2060654:1:exon

position:2060654:1
position: 2060654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2094361-2094516:1:exon

position:2094361:1
position: 2094361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2094516:1
position: 2094516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2101635-2101746:1:exon

position:2101635:1
position: 2101635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2101746:1
position: 2101746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2101854-2101963:1:exon

position:2101854:1
position: 2101854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2101963:1
position: 2101963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2119288-2119429:1:exon

position:2119288:1
position: 2119288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2119429:1
position: 2119429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2189546-2189841:1:exon

position:2189546:1
position: 2189546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2189841:1
position: 2189841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2199667-2199849:1:exon

position:2199667:1
position: 2199667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2199849:1
position: 2199849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2203271-2203462:1:exon

position:2203271:1
position: 2203271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2203462:1
position: 2203462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2205518-2205676:1:exon

position:2205518:1
position: 2205518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2205676:1
position: 2205676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2212001-2212123:1:exon

position:2212001:1
position: 2212001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2212123:1
position: 2212123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2212565-2212751:1:exon

position:2212565:1
position: 2212565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2212751:1
position: 2212751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2219876-2221953:1:exon

position:2219876:1
position: 2219876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116986140
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986140
product: nucleolar protein 4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033041320.1
SIO_010081: LOC116986140
subclass of: SO_0000673
so part of: LOC116986140
location: join(2060312..2060654,2094361..2094516,2101635..2101746,2101854..2101963,2119288..2119429,2189546..2189841,2199667..2199849,2203271..2203462,2205518..2205676,2212001..2212116,2212561..2212751,2219876..2221953)
location: region:2060312-2221953:1
so has part: feature:2060312-2060654:1:exon
so has part: feature:2094361-2094516:1:exon
so has part: feature:2101635-2101746:1:exon
so has part: feature:2101854-2101963:1:exon
so has part: feature:2119288-2119429:1:exon
so has part: feature:2189546-2189841:1:exon
so has part: feature:2199667-2199849:1:exon
so has part: feature:2203271-2203462:1:exon
so has part: feature:2205518-2205676:1:exon
so has part: feature:2212001-2212116:1:exon
so has part: feature:2212561-2212751:1:exon
so has part: feature:2219876-2221953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2060312-2060654:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2094361-2094516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2101635-2101746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2101854-2101963:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2119288-2119429:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2189546-2189841:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2199667-2199849:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2203271-2203462:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2205518-2205676:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2212001-2212116:1:exon

position:2212116:1
position: 2212116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2212561-2212751:1:exon

position:2212561:1
position: 2212561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2219876-2221953:1:exon

LOC116986140
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986140
product: nucleolar protein 4-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033041321.1
SIO_010081: LOC116986140
subclass of: SO_0000673
so part of: LOC116986140
location: join(2060312..2060654,2094361..2094516,2101635..2101746,2101854..2101963,2119288..2119429,2189546..2189841,2199667..2199849,2203271..2203462,2212001..2212123,2212565..2212751,2219876..2221953)
location: region:2060312-2221953:1
so has part: feature:2060312-2060654:1:exon
so has part: feature:2094361-2094516:1:exon
so has part: feature:2101635-2101746:1:exon
so has part: feature:2101854-2101963:1:exon
so has part: feature:2119288-2119429:1:exon
so has part: feature:2189546-2189841:1:exon
so has part: feature:2199667-2199849:1:exon
so has part: feature:2203271-2203462:1:exon
so has part: feature:2212001-2212123:1:exon
so has part: feature:2212565-2212751:1:exon
so has part: feature:2219876-2221953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2060312-2060654:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2094361-2094516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2101635-2101746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2101854-2101963:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2119288-2119429:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2189546-2189841:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2199667-2199849:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2203271-2203462:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2212001-2212123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2212565-2212751:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2219876-2221953:1:exon

LOC116986140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein 4-like isoform X1
translation: MDWASGGAGDMSAHFQDWCLRTYGDLGKTKTVTRMKYQRIVQLLSGAEPGSADNAKFKFWVKSKGFQLGLSDPRTDVAAKPAVFVPVKTTTGDGVTAKDSISLKRVAVVEDFFDIIYSMHVETGTETGRTAKHAGQKRTYKAIAETYAFLPREAVTRFLMSCTECQKRMHINPNSVDSKENERPSSLAGVIDYNMPITATYLKQMKLQFMCGSQELDGSSVSSDDFDMSNTTWISTDQFVNSDISPSQEEKMHSPQNPHNQEDDDSSSECCSGNGSTTLNPATSNSAQGGSTLVEVNGNSSTGLEYSGSPEDQPVNLSERFLPAQVDNGSTDGPRNRAKYMGKGSSDVRLNKLDVTREYSSKSPPYSSGSYDSGRNELLGTCPEDLSMTRGGDDDDDEHDDHEDNEKINDSEGMDPERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIESCSRQFPEFQERARKRIRTYLKSCRRMKKNGIELASRLHTSSFRQEDREEGASNFFMSTVAAAAPPSASRKRTCWRVRRTPGFPSSEARPTPPHLTSAMAENILAAACESESRKAAKRMRLESYQQQQDEPIALDKQTQQGREAAQLPHSAYPLPTSTYSQDQMYINGGLNCTYRGHSTIGGLQAGSLCNGPTDLSMKALTSNSTSSSTSSSRSVTAPQLSPTEINAVRQLIAGYRESAAFLLRSADELENLILQQN
SIO_010081: LOC116986140
subclass of: SO_0000673
so part of: LOC116986140
location: join(2060385..2060654,2094361..2094516,2101635..2101746,2101854..2101963,2119288..2119429,2189546..2189841,2199667..2199849,2203271..2203462,2205518..2205676,2212001..2212123,2212565..2212751,2219876..2220078)
location: region:2060385-2220078:1
so has part: feature:2060385-2060654:1:exon
so has part: feature:2094361-2094516:1:exon
so has part: feature:2101635-2101746:1:exon
so has part: feature:2101854-2101963:1:exon
so has part: feature:2119288-2119429:1:exon
so has part: feature:2189546-2189841:1:exon
so has part: feature:2199667-2199849:1:exon
so has part: feature:2203271-2203462:1:exon
so has part: feature:2205518-2205676:1:exon
so has part: feature:2212001-2212123:1:exon
so has part: feature:2212565-2212751:1:exon
so has part: feature:2219876-2220078:1:exon

XP_032897210.1
type: Protein
SIO_000068: ncbiprotein

position:2060385:1
position: 2060385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2220078:1
position: 2220078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2060385-2060654:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2094361-2094516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2101635-2101746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2101854-2101963:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2119288-2119429:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2189546-2189841:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2199667-2199849:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2203271-2203462:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2205518-2205676:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2212001-2212123:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2212565-2212751:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2219876-2220078:1:exon

LOC116986140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein 4-like isoform X2
translation: MDWASGGAGDMSAHFQDWCLRTYGDLGKTKTVTRMKYQRIVQLLSGAEPGSADNAKFKFWVKSKGFQLGLSDPRTDVAAKPAVFVPVKTTTGDGVTAKDSISLKRVAVVEDFFDIIYSMHVETGTETGRTAKHAGQKRTYKAIAETYAFLPREAVTRFLMSCTECQKRMHINPNSVDSKENERPSSLAGVIDYNMPITATYLKQMKLQFMCGSQELDGSSVSSDDFDMSNTTWISTDQFVNSDISPSQEEKMHSPQNPHNQEDDDSSSECCSGNGSTTLNPATSNSAQGGSTLVEVNGNSSTGLEYSGSPEDQPVNLSERFLPAQVDNGSTDGPRNRAKYMGKGSSDVRLNKLDVTREYSSKSPPYSSGSYDSGRNELLGTCPEDLSMTRGGDDDDDEHDDHEDNEKINDSEGMDPERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIESCSRQFPEFQERARKRIRTYLKSCRRMKKNGIELASRLHTSSFRQEDREEGASNFFMSTVAAAAPPSASRKRTCWRVRRTPGFPSSEARPTPPHLTSAMAENILAAACESESRKAAKRMRLESYQQQDEPIALDKQTQQGREAAQLPHSAYPLPTSTYSQDQMYINGGLNCTYRGHSTIGGLQAGSLCNGPTDLSMKALTSNSTSSSTSSSRSVTAPQLSPTEINAVRQLIAGYRESAAFLLRSADELENLILQQN
SIO_010081: LOC116986140
subclass of: SO_0000673
so part of: LOC116986140
location: join(2060385..2060654,2094361..2094516,2101635..2101746,2101854..2101963,2119288..2119429,2189546..2189841,2199667..2199849,2203271..2203462,2205518..2205676,2212001..2212116,2212561..2212751,2219876..2220078)
location: region:2060385-2220078:1
so has part: feature:2060385-2060654:1:exon
so has part: feature:2094361-2094516:1:exon
so has part: feature:2101635-2101746:1:exon
so has part: feature:2101854-2101963:1:exon
so has part: feature:2119288-2119429:1:exon
so has part: feature:2189546-2189841:1:exon
so has part: feature:2199667-2199849:1:exon
so has part: feature:2203271-2203462:1:exon
so has part: feature:2205518-2205676:1:exon
so has part: feature:2212001-2212116:1:exon
so has part: feature:2212561-2212751:1:exon
so has part: feature:2219876-2220078:1:exon

XP_032897211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2060385-2060654:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2094361-2094516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2101635-2101746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2101854-2101963:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2119288-2119429:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2189546-2189841:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2199667-2199849:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2203271-2203462:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2205518-2205676:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2212001-2212116:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2212561-2212751:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2219876-2220078:1:exon

LOC116986140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein 4-like isoform X3
translation: MDWASGGAGDMSAHFQDWCLRTYGDLGKTKTVTRMKYQRIVQLLSGAEPGSADNAKFKFWVKSKGFQLGLSDPRTDVAAKPAVFVPVKTTTGDGVTAKDSISLKRVAVVEDFFDIIYSMHVETGTETGRTAKHAGQKRTYKAIAETYAFLPREAVTRFLMSCTECQKRMHINPNSVDSKENERPSSLAGVIDYNMPITATYLKQMKLQFMCGSQELDGSSVSSDDFDMSNTTWISTDQFVNSDISPSQEEKMHSPQNPHNQEDDDSSSECCSGNGSTTLNPATSNSAQGGSTLVEVNGNSSTGLEYSGSPEDQPVNLSERFLPAQVDNGSTDGPRNRAKYMGKGSSDVRLNKLDVTREYSSKSPPYSSGSYDSGRNELLGTCPEDLSMTRGGDDDDDEHDDHEDNEKINDSEGMDPERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIESCSRQFPEFQERARKRIRTYLKSCRRMKKNGIELARPTPPHLTSAMAENILAAACESESRKAAKRMRLESYQQQQDEPIALDKQTQQGREAAQLPHSAYPLPTSTYSQDQMYINGGLNCTYRGHSTIGGLQAGSLCNGPTDLSMKALTSNSTSSSTSSSRSVTAPQLSPTEINAVRQLIAGYRESAAFLLRSADELENLILQQN
SIO_010081: LOC116986140
subclass of: SO_0000673
so part of: LOC116986140
location: join(2060385..2060654,2094361..2094516,2101635..2101746,2101854..2101963,2119288..2119429,2189546..2189841,2199667..2199849,2203271..2203462,2212001..2212123,2212565..2212751,2219876..2220078)
location: region:2060385-2220078:1
so has part: feature:2060385-2060654:1:exon
so has part: feature:2094361-2094516:1:exon
so has part: feature:2101635-2101746:1:exon
so has part: feature:2101854-2101963:1:exon
so has part: feature:2119288-2119429:1:exon
so has part: feature:2189546-2189841:1:exon
so has part: feature:2199667-2199849:1:exon
so has part: feature:2203271-2203462:1:exon
so has part: feature:2212001-2212123:1:exon
so has part: feature:2212565-2212751:1:exon
so has part: feature:2219876-2220078:1:exon

XP_032897212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2060385-2060654:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2094361-2094516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2101635-2101746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2101854-2101963:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2119288-2119429:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2189546-2189841:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2199667-2199849:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2203271-2203462:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2212001-2212123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2212565-2212751:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2219876-2220078:1:exon

LOC116986140
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986140
product: nucleolar protein 4-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033041322.1
SIO_010081: LOC116986140
subclass of: SO_0000673
so part of: LOC116986140
location: join(2110511..2110632,2119288..2119429,2189546..2189841,2199667..2199849,2203271..2203462,2205518..2205676,2212001..2212123,2212565..2212751,2219876..2221953)
location: region:2110511-2221953:1
so has part: feature:2110511-2110632:1:exon
so has part: feature:2119288-2119429:1:exon
so has part: feature:2189546-2189841:1:exon
so has part: feature:2199667-2199849:1:exon
so has part: feature:2203271-2203462:1:exon
so has part: feature:2205518-2205676:1:exon
so has part: feature:2212001-2212123:1:exon
so has part: feature:2212565-2212751:1:exon
so has part: feature:2219876-2221953:1:exon

position:2110511:1
position: 2110511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2110511-2110632:1:exon

position:2110632:1
position: 2110632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2119288-2119429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2189546-2189841:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2199667-2199849:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2203271-2203462:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2205518-2205676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2212001-2212123:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2212565-2212751:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2219876-2221953:1:exon

LOC116986140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein 4-like isoform X4
translation: MSNTTWISTDQFVNSDISPSQEEKMHSPQNPHNQEDDDSSSECCSGNGSTTLNPATSNSAQGGSTLVEVNGNSSTGLEYSGSPEDQPVNLSERFLPAQVDNGSTDGPRNRAKYMGKGSSDVRLNKLDVTREYSSKSPPYSSGSYDSGRNELLGTCPEDLSMTRGGDDDDDEHDDHEDNEKINDSEGMDPERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIESCSRQFPEFQERARKRIRTYLKSCRRMKKNGIELASRLHTSSFRQEDREEGASNFFMSTVAAAAPPSASRKRTCWRVRRTPGFPSSEARPTPPHLTSAMAENILAAACESESRKAAKRMRLESYQQQQDEPIALDKQTQQGREAAQLPHSAYPLPTSTYSQDQMYINGGLNCTYRGHSTIGGLQAGSLCNGPTDLSMKALTSNSTSSSTSSSRSVTAPQLSPTEINAVRQLIAGYRESAAFLLRSADELENLILQQN
SIO_010081: LOC116986140
subclass of: SO_0000673
so part of: LOC116986140
location: join(2119321..2119429,2189546..2189841,2199667..2199849,2203271..2203462,2205518..2205676,2212001..2212123,2212565..2212751,2219876..2220078)
location: region:2119321-2220078:1
so has part: feature:2119321-2119429:1:exon
so has part: feature:2189546-2189841:1:exon
so has part: feature:2199667-2199849:1:exon
so has part: feature:2203271-2203462:1:exon
so has part: feature:2205518-2205676:1:exon
so has part: feature:2212001-2212123:1:exon
so has part: feature:2212565-2212751:1:exon
so has part: feature:2219876-2220078:1:exon

XP_032897213.1
type: Protein
SIO_000068: ncbiprotein

position:2119321:1
position: 2119321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2119321-2119429:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2189546-2189841:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2199667-2199849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2203271-2203462:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2205518-2205676:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2212001-2212123:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2212565-2212751:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2219876-2220078:1:exon

LOC116986141
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2230960..2309178)
location: region:2230960-2309178:-1
so has part: feature:2230960-2309178:-1:exon
subclass of: SO_0000010

116986141
type: Gene
SIO_000068: ncbigene

position:2230960:-1
position: 2230960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2309178:-1
position: 2309178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2230960-2309178:-1:exon

LOC116986141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986141
product: polycomb group protein ASXL1-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033041331.1
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2230960..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2308747..2309178))
location: region:2230960-2309178:-1
so has part: feature:2308747-2309178:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2230960-2235303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2308747-2309178:-1:exon

position:2308747:-1
position: 2308747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2263643-2263760:-1:exon

position:2263643:-1
position: 2263643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2263760:-1
position: 2263760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2261209-2261315:-1:exon

position:2261209:-1
position: 2261209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2261315:-1
position: 2261315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2253101-2253218:-1:exon

position:2253101:-1
position: 2253101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2253218:-1
position: 2253218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2252176-2252352:-1:exon

position:2252176:-1
position: 2252176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2252352:-1
position: 2252352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2248127-2248293:-1:exon

position:2248127:-1
position: 2248127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2248293:-1
position: 2248293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2244178-2244274:-1:exon

position:2244178:-1
position: 2244178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2244274:-1
position: 2244274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2243172-2243277:-1:exon

position:2243172:-1
position: 2243172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2243277:-1
position: 2243277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2238426-2239176:-1:exon

position:2238426:-1
position: 2238426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2239176:-1
position: 2239176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2230960-2235303:-1:exon

position:2235303:-1
position: 2235303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116986141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986141
product: polycomb group protein ASXL1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033041325.1
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2230960..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248290,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2275335..2275443,2292575..2292577,2293465..2293547,2308747..2309178))
location: region:2230960-2309178:-1
so has part: feature:2308747-2309178:-1:exon
so has part: feature:2293465-2293547:-1:exon
so has part: feature:2292575-2292577:-1:exon
so has part: feature:2275335-2275443:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248290:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2230960-2235303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2308747-2309178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2293465-2293547:-1:exon

position:2293465:-1
position: 2293465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2293547:-1
position: 2293547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2292575-2292577:-1:exon

position:2292575:-1
position: 2292575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2292577:-1
position: 2292577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2275335-2275443:-1:exon

position:2275335:-1
position: 2275335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2275443:-1
position: 2275443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2248127-2248290:-1:exon

position:2248290:-1
position: 2248290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2230960-2235303:-1:exon

LOC116986141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986141
product: polycomb group protein ASXL1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033041323.1
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2230960..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2275335..2275443,2292575..2292577,2293465..2293547,2308747..2309178))
location: region:2230960-2309178:-1
so has part: feature:2308747-2309178:-1:exon
so has part: feature:2293465-2293547:-1:exon
so has part: feature:2292575-2292577:-1:exon
so has part: feature:2275335-2275443:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2230960-2235303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2308747-2309178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2293465-2293547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2292575-2292577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2275335-2275443:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2248127-2248293:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2230960-2235303:-1:exon

LOC116986141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986141
product: polycomb group protein ASXL1-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033041330.1
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2230960..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2295631..2295633,2308747..2309178))
location: region:2230960-2309178:-1
so has part: feature:2308747-2309178:-1:exon
so has part: feature:2295631-2295633:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2230960-2235303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2308747-2309178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2295631-2295633:-1:exon

position:2295631:-1
position: 2295631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2295633:-1
position: 2295633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2248127-2248293:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2230960-2235303:-1:exon

LOC116986141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986141
product: polycomb group protein ASXL1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033041328.1
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2230960..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2275335..2275443,2308747..2308877))
location: region:2230960-2308877:-1
so has part: feature:2308747-2308877:-1:exon
so has part: feature:2275335-2275443:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2230960-2235303:-1:exon

position:2308877:-1
position: 2308877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2308747-2308877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2275335-2275443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2248127-2248293:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2230960-2235303:-1:exon

LOC116986141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986141
product: polycomb group protein ASXL1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033041327.1
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2230960..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2275335..2275443,2295631..2295633,2308747..2308852))
location: region:2230960-2308852:-1
so has part: feature:2308747-2308852:-1:exon
so has part: feature:2295631-2295633:-1:exon
so has part: feature:2275335-2275443:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2230960-2235303:-1:exon

position:2308852:-1
position: 2308852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2308747-2308852:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2295631-2295633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2275335-2275443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2248127-2248293:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2230960-2235303:-1:exon

LOC116986141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986141
product: polycomb group protein ASXL1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033041326.1
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2230960..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2275335..2275443,2292575..2292577,2293465..2293547,2297273..2297376))
location: region:2230960-2297376:-1
so has part: feature:2297273-2297376:-1:exon
so has part: feature:2293465-2293547:-1:exon
so has part: feature:2292575-2292577:-1:exon
so has part: feature:2275335-2275443:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2230960-2235303:-1:exon

position:2297376:-1
position: 2297376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2297273-2297376:-1:exon

position:2297273:-1
position: 2297273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2293465-2293547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2292575-2292577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2275335-2275443:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2248127-2248293:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2230960-2235303:-1:exon

LOC116986141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986141
product: polycomb group protein ASXL1-like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033041332.1
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2230960..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2291723..2291996))
location: region:2230960-2291996:-1
so has part: feature:2291723-2291996:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2230960-2235303:-1:exon

position:2291996:-1
position: 2291996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2291723-2291996:-1:exon

position:2291723:-1
position: 2291723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2248127-2248293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2230960-2235303:-1:exon

LOC116986141
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986141
product: polycomb group protein ASXL1-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033041329.1
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2230960..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2275335..2275443,2291723..2291996))
location: region:2230960-2291996:-1
so has part: feature:2291723-2291996:-1:exon
so has part: feature:2275335-2275443:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2230960-2235303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2291723-2291996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2275335-2275443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2248127-2248293:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2230960-2235303:-1:exon

LOC116986141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group protein ASXL1-like isoform X6
translation: MKQQQQRRKRDRTWAEAARMKDALLWSKNMPIGDEGYDDGPDLESCDSNEASTTGEENDASPVSDESSSNASCSTETQGKQVSPGKQNSNKATQQPVKQQPKKKIGVPVMMSKSIPRVVLTPLKVNGEHVESASVFTAKHTDGESSSTSNGSSCTVTSGSTQYNRTEMNKLQCRPSLNRKPGQHFRALRRSNTAGQMKRNRGEEIDVETPGSILVNTNLRALINSRTFASLPLHFQQQLLFLLPEVDRQVGTDGIMRLSSSALNNEFFTSAAQGWKERLAEGEFTPEMQLRLRQEMEKEKKVELWKENFFEDYYGQKLGLSKAESEEQTAVKVEIEKEANSPVLAGPSKQLSPVKKQDERIRKCTRSSKVDLKCRVRRNLIADRKPEVPEQSEKAAACTVPSHDTRSQKQHNVEVKVSQAGACVDEDPLGPIDNEASPGQPKEVLPNKSALKSKATLLTEKPAETQPQERTKSDVHLELSEVQPAAISKDQVTCLTVKSAALKSQLEHNFSESKEQKRKSSEHGASTSGPEKKPRLEDHQSFRTAIDSFRTEKEQPTREEPKVPPIRIQLSRIKPPWAVKGQPAYQICPRIISSVGPSSRERTGARTLADIKARAQQARAQREAAAAAAAHVTMEGGGGGGGGGDGPASADSPRPIDRKAKVPEQAAAKHQHRAQLQQAGDADEELDKHDTDPDNSVKQGVIIEECLESNLVDAAPGKSEPAADEVQSIGWDGDAEYSMVSSNSPALLEDVQDQVTVSEVSDALVSDGQSNGDEPATPLEDLLPEPLDLPADSDTTLQEASTNGQCESVVVVSLAKTDDPLLLPCDQPPNPDLGDKTSGTDEPLQKYVFSGTVIAETKNAAIINSMDSPVPEVNAAVSDSLQCNGSENKTNTTDILSINFPPSDTSEQEVNGCPVEQTGSLLIHKAPSSTLSSHEEEERACDELKINNKLEASELLELSNEPHVAEKQMTSVIVSICSTKDPSHSLAQKLSLEAEKVAACTAPVDAEVCTKEQPVKQEQASAQVGQQSVEADVDVTVEELSSKRQNDSGTDNENSLYYKPEINSPLSDESCVPPTSERMSKDDRAPVCSESGVIVESPDGGKGSKNSDRHQAAHLSVDNQLQKNELLSEGQRQKAEVLHHLNRANSLLNPRSEGPKRPGDLNRPLSSAEVNNPLVTQLLQGSLPLEKVLPQYHSGTKLEITRLLVPHPEIPAVKQERGLNQSTIDHVAQTTNIKSIISGVHSGINKLADYHLHKILSGDFRDLSQKRLEQMKSTVLQSSKHYLHSQMVLDRECKSLDGPVLQEQLNRTPVLTKPVEESGVITQRIVPIPCSYEEGCKELINISSGNVQSNRVHNPPVRSMPETLKQISSSTVSGYYIPNTPTFCKGLESQNTIFGSVIAKACGGLPGRQKLSHGYLHNTVLVQNDGVYRGTEVIKIQSRGSVFENMPAITQTSPDRKLIAMEGVPNVGRDWLPKLHESFKVIKTENMPPCREMNKKQDILGIKDGAYIPFDSKDKLYVGPIKMDCSIGKVMKESGLQFHHSSERSLINSQLSIQQQLYGKLPKLSLSTAGFSHLTNTTVSELSMGPFPVSLAGSMMSLSQKTNFGNHNSAIPAQTFAENSGVSEMTFKCSCRLKAMIMCKGCGAFCHDDCIGPSKLCVSCLVVR
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2232010..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2308747..2308806))
location: region:2232010-2308806:-1
so has part: feature:2308747-2308806:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2232010-2235303:-1:exon

XP_032897222.1
type: Protein
SIO_000068: ncbiprotein

position:2232010:-1
position: 2232010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2308806:-1
position: 2308806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2308747-2308806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2248127-2248293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2232010-2235303:-1:exon

LOC116986141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group protein ASXL1-like isoform X2
translation: MKQQQQRRKRDRTWAEAARMVLENYSDAPMTPKQILHVIETEGLKEMRSGTSPLACLNAMLHTNSRADDGMFYRLPGRMGLYTLKKDALLWSKNMPIGDEGYDDGPDLESCDSNEASTTGEENDASPVSDESSSNASCSTETQGKQVSPGKQNSNKATQQPVKQQPKKKIGVPVMMSKSIPRVVLTPLKVNGEHVESASVFTAKHTDGESSSTSNGSSCTVTSGSTQYNRTEMNKLQCRPSLNRKPGQHFRALRRSNTGQMKRNRGEEIDVETPGSILVNTNLRALINSRTFASLPLHFQQQLLFLLPEVDRQVGTDGIMRLSSSALNNEFFTSAAQGWKERLAEGEFTPEMQLRLRQEMEKEKKVELWKENFFEDYYGQKLGLSKAESEEQTAVKVEIEKEANSPVLAGPSKQLSPVKKQDERIRKCTRSSKVDLKCRVRRNLIADRKPEVPEQSEKAAACTVPSHDTRSQKQHNVEVKVSQAGACVDEDPLGPIDNEASPGQPKEVLPNKSALKSKATLLTEKPAETQPQERTKSDVHLELSEVQPAAISKDQVTCLTVKSAALKSQLEHNFSESKEQKRKSSEHGASTSGPEKKPRLEDHQSFRTAIDSFRTEKEQPTREEPKVPPIRIQLSRIKPPWAVKGQPAYQICPRIISSVGPSSRERTGARTLADIKARAQQARAQREAAAAAAAHVTMEGGGGGGGGGDGPASADSPRPIDRKAKVPEQAAAKHQHRAQLQQAGDADEELDKHDTDPDNSVKQGVIIEECLESNLVDAAPGKSEPAADEVQSIGWDGDAEYSMVSSNSPALLEDVQDQVTVSEVSDALVSDGQSNGDEPATPLEDLLPEPLDLPADSDTTLQEASTNGQCESVVVVSLAKTDDPLLLPCDQPPNPDLGDKTSGTDEPLQKYVFSGTVIAETKNAAIINSMDSPVPEVNAAVSDSLQCNGSENKTNTTDILSINFPPSDTSEQEVNGCPVEQTGSLLIHKAPSSTLSSHEEEERACDELKINNKLEASELLELSNEPHVAEKQMTSVIVSICSTKDPSHSLAQKLSLEAEKVAACTAPVDAEVCTKEQPVKQEQASAQVGQQSVEADVDVTVEELSSKRQNDSGTDNENSLYYKPEINSPLSDESCVPPTSERMSKDDRAPVCSESGVIVESPDGGKGSKNSDRHQAAHLSVDNQLQKNELLSEGQRQKAEVLHHLNRANSLLNPRSEGPKRPGDLNRPLSSAEVNNPLVTQLLQGSLPLEKVLPQYHSGTKLEITRLLVPHPEIPAVKQERGLNQSTIDHVAQTTNIKSIISGVHSGINKLADYHLHKILSGDFRDLSQKRLEQMKSTVLQSSKHYLHSQMVLDRECKSLDGPVLQEQLNRTPVLTKPVEESGVITQRIVPIPCSYEEGCKELINISSGNVQSNRVHNPPVRSMPETLKQISSSTVSGYYIPNTPTFCKGLESQNTIFGSVIAKACGGLPGRQKLSHGYLHNTVLVQNDGVYRGTEVIKIQSRGSVFENMPAITQTSPDRKLIAMEGVPNVGRDWLPKLHESFKVIKTENMPPCREMNKKQDILGIKDGAYIPFDSKDKLYVGPIKMDCSIGKVMKESGLQFHHSSERSLINSQLSIQQQLYGKLPKLSLSTAGFSHLTNTTVSELSMGPFPVSLAGSMMSLSQKTNFGNHNSAIPAQTFAENSGVSEMTFKCSCRLKAMIMCKGCGAFCHDDCIGPSKLCVSCLVVR
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2232010..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248290,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2275335..2275443,2292575..2292577,2293465..2293547,2308747..2308806))
location: region:2232010-2308806:-1
so has part: feature:2308747-2308806:-1:exon
so has part: feature:2293465-2293547:-1:exon
so has part: feature:2292575-2292577:-1:exon
so has part: feature:2275335-2275443:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248290:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2232010-2235303:-1:exon

XP_032897216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2308747-2308806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2293465-2293547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2292575-2292577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2275335-2275443:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2248127-2248290:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2232010-2235303:-1:exon

LOC116986141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group protein ASXL1-like isoform X1
translation: MKQQQQRRKRDRTWAEAARMVLENYSDAPMTPKQILHVIETEGLKEMRSGTSPLACLNAMLHTNSRADDGMFYRLPGRMGLYTLKKDALLWSKNMPIGDEGYDDGPDLESCDSNEASTTGEENDASPVSDESSSNASCSTETQGKQVSPGKQNSNKATQQPVKQQPKKKIGVPVMMSKSIPRVVLTPLKVNGEHVESASVFTAKHTDGESSSTSNGSSCTVTSGSTQYNRTEMNKLQCRPSLNRKPGQHFRALRRSNTAGQMKRNRGEEIDVETPGSILVNTNLRALINSRTFASLPLHFQQQLLFLLPEVDRQVGTDGIMRLSSSALNNEFFTSAAQGWKERLAEGEFTPEMQLRLRQEMEKEKKVELWKENFFEDYYGQKLGLSKAESEEQTAVKVEIEKEANSPVLAGPSKQLSPVKKQDERIRKCTRSSKVDLKCRVRRNLIADRKPEVPEQSEKAAACTVPSHDTRSQKQHNVEVKVSQAGACVDEDPLGPIDNEASPGQPKEVLPNKSALKSKATLLTEKPAETQPQERTKSDVHLELSEVQPAAISKDQVTCLTVKSAALKSQLEHNFSESKEQKRKSSEHGASTSGPEKKPRLEDHQSFRTAIDSFRTEKEQPTREEPKVPPIRIQLSRIKPPWAVKGQPAYQICPRIISSVGPSSRERTGARTLADIKARAQQARAQREAAAAAAAHVTMEGGGGGGGGGDGPASADSPRPIDRKAKVPEQAAAKHQHRAQLQQAGDADEELDKHDTDPDNSVKQGVIIEECLESNLVDAAPGKSEPAADEVQSIGWDGDAEYSMVSSNSPALLEDVQDQVTVSEVSDALVSDGQSNGDEPATPLEDLLPEPLDLPADSDTTLQEASTNGQCESVVVVSLAKTDDPLLLPCDQPPNPDLGDKTSGTDEPLQKYVFSGTVIAETKNAAIINSMDSPVPEVNAAVSDSLQCNGSENKTNTTDILSINFPPSDTSEQEVNGCPVEQTGSLLIHKAPSSTLSSHEEEERACDELKINNKLEASELLELSNEPHVAEKQMTSVIVSICSTKDPSHSLAQKLSLEAEKVAACTAPVDAEVCTKEQPVKQEQASAQVGQQSVEADVDVTVEELSSKRQNDSGTDNENSLYYKPEINSPLSDESCVPPTSERMSKDDRAPVCSESGVIVESPDGGKGSKNSDRHQAAHLSVDNQLQKNELLSEGQRQKAEVLHHLNRANSLLNPRSEGPKRPGDLNRPLSSAEVNNPLVTQLLQGSLPLEKVLPQYHSGTKLEITRLLVPHPEIPAVKQERGLNQSTIDHVAQTTNIKSIISGVHSGINKLADYHLHKILSGDFRDLSQKRLEQMKSTVLQSSKHYLHSQMVLDRECKSLDGPVLQEQLNRTPVLTKPVEESGVITQRIVPIPCSYEEGCKELINISSGNVQSNRVHNPPVRSMPETLKQISSSTVSGYYIPNTPTFCKGLESQNTIFGSVIAKACGGLPGRQKLSHGYLHNTVLVQNDGVYRGTEVIKIQSRGSVFENMPAITQTSPDRKLIAMEGVPNVGRDWLPKLHESFKVIKTENMPPCREMNKKQDILGIKDGAYIPFDSKDKLYVGPIKMDCSIGKVMKESGLQFHHSSERSLINSQLSIQQQLYGKLPKLSLSTAGFSHLTNTTVSELSMGPFPVSLAGSMMSLSQKTNFGNHNSAIPAQTFAENSGVSEMTFKCSCRLKAMIMCKGCGAFCHDDCIGPSKLCVSCLVVR
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2232010..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2275335..2275443,2292575..2292577,2293465..2293547,2308747..2308806))
location: region:2232010-2308806:-1
so has part: feature:2308747-2308806:-1:exon
so has part: feature:2293465-2293547:-1:exon
so has part: feature:2292575-2292577:-1:exon
so has part: feature:2275335-2275443:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2232010-2235303:-1:exon

XP_032897214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2308747-2308806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2293465-2293547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2292575-2292577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2275335-2275443:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2248127-2248293:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2232010-2235303:-1:exon

LOC116986141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group protein ASXL1-like isoform X5
translation: MKQQQQRRKRDRTWAEAARMKKDALLWSKNMPIGDEGYDDGPDLESCDSNEASTTGEENDASPVSDESSSNASCSTETQGKQVSPGKQNSNKATQQPVKQQPKKKIGVPVMMSKSIPRVVLTPLKVNGEHVESASVFTAKHTDGESSSTSNGSSCTVTSGSTQYNRTEMNKLQCRPSLNRKPGQHFRALRRSNTAGQMKRNRGEEIDVETPGSILVNTNLRALINSRTFASLPLHFQQQLLFLLPEVDRQVGTDGIMRLSSSALNNEFFTSAAQGWKERLAEGEFTPEMQLRLRQEMEKEKKVELWKENFFEDYYGQKLGLSKAESEEQTAVKVEIEKEANSPVLAGPSKQLSPVKKQDERIRKCTRSSKVDLKCRVRRNLIADRKPEVPEQSEKAAACTVPSHDTRSQKQHNVEVKVSQAGACVDEDPLGPIDNEASPGQPKEVLPNKSALKSKATLLTEKPAETQPQERTKSDVHLELSEVQPAAISKDQVTCLTVKSAALKSQLEHNFSESKEQKRKSSEHGASTSGPEKKPRLEDHQSFRTAIDSFRTEKEQPTREEPKVPPIRIQLSRIKPPWAVKGQPAYQICPRIISSVGPSSRERTGARTLADIKARAQQARAQREAAAAAAAHVTMEGGGGGGGGGDGPASADSPRPIDRKAKVPEQAAAKHQHRAQLQQAGDADEELDKHDTDPDNSVKQGVIIEECLESNLVDAAPGKSEPAADEVQSIGWDGDAEYSMVSSNSPALLEDVQDQVTVSEVSDALVSDGQSNGDEPATPLEDLLPEPLDLPADSDTTLQEASTNGQCESVVVVSLAKTDDPLLLPCDQPPNPDLGDKTSGTDEPLQKYVFSGTVIAETKNAAIINSMDSPVPEVNAAVSDSLQCNGSENKTNTTDILSINFPPSDTSEQEVNGCPVEQTGSLLIHKAPSSTLSSHEEEERACDELKINNKLEASELLELSNEPHVAEKQMTSVIVSICSTKDPSHSLAQKLSLEAEKVAACTAPVDAEVCTKEQPVKQEQASAQVGQQSVEADVDVTVEELSSKRQNDSGTDNENSLYYKPEINSPLSDESCVPPTSERMSKDDRAPVCSESGVIVESPDGGKGSKNSDRHQAAHLSVDNQLQKNELLSEGQRQKAEVLHHLNRANSLLNPRSEGPKRPGDLNRPLSSAEVNNPLVTQLLQGSLPLEKVLPQYHSGTKLEITRLLVPHPEIPAVKQERGLNQSTIDHVAQTTNIKSIISGVHSGINKLADYHLHKILSGDFRDLSQKRLEQMKSTVLQSSKHYLHSQMVLDRECKSLDGPVLQEQLNRTPVLTKPVEESGVITQRIVPIPCSYEEGCKELINISSGNVQSNRVHNPPVRSMPETLKQISSSTVSGYYIPNTPTFCKGLESQNTIFGSVIAKACGGLPGRQKLSHGYLHNTVLVQNDGVYRGTEVIKIQSRGSVFENMPAITQTSPDRKLIAMEGVPNVGRDWLPKLHESFKVIKTENMPPCREMNKKQDILGIKDGAYIPFDSKDKLYVGPIKMDCSIGKVMKESGLQFHHSSERSLINSQLSIQQQLYGKLPKLSLSTAGFSHLTNTTVSELSMGPFPVSLAGSMMSLSQKTNFGNHNSAIPAQTFAENSGVSEMTFKCSCRLKAMIMCKGCGAFCHDDCIGPSKLCVSCLVVR
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2232010..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2295631..2295633,2308747..2308806))
location: region:2232010-2308806:-1
so has part: feature:2308747-2308806:-1:exon
so has part: feature:2295631-2295633:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2232010-2235303:-1:exon

XP_032897221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2308747-2308806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2295631-2295633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2248127-2248293:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2232010-2235303:-1:exon

LOC116986141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group protein ASXL1-like isoform X3
translation: MTPKQILHVIETEGLKEMRSGTSPLACLNAMLHTNSRADDGMFYRLPGRMGLYTLKKDALLWSKNMPIGDEGYDDGPDLESCDSNEASTTGEENDASPVSDESSSNASCSTETQGKQVSPGKQNSNKATQQPVKQQPKKKIGVPVMMSKSIPRVVLTPLKVNGEHVESASVFTAKHTDGESSSTSNGSSCTVTSGSTQYNRTEMNKLQCRPSLNRKPGQHFRALRRSNTAGQMKRNRGEEIDVETPGSILVNTNLRALINSRTFASLPLHFQQQLLFLLPEVDRQVGTDGIMRLSSSALNNEFFTSAAQGWKERLAEGEFTPEMQLRLRQEMEKEKKVELWKENFFEDYYGQKLGLSKAESEEQTAVKVEIEKEANSPVLAGPSKQLSPVKKQDERIRKCTRSSKVDLKCRVRRNLIADRKPEVPEQSEKAAACTVPSHDTRSQKQHNVEVKVSQAGACVDEDPLGPIDNEASPGQPKEVLPNKSALKSKATLLTEKPAETQPQERTKSDVHLELSEVQPAAISKDQVTCLTVKSAALKSQLEHNFSESKEQKRKSSEHGASTSGPEKKPRLEDHQSFRTAIDSFRTEKEQPTREEPKVPPIRIQLSRIKPPWAVKGQPAYQICPRIISSVGPSSRERTGARTLADIKARAQQARAQREAAAAAAAHVTMEGGGGGGGGGDGPASADSPRPIDRKAKVPEQAAAKHQHRAQLQQAGDADEELDKHDTDPDNSVKQGVIIEECLESNLVDAAPGKSEPAADEVQSIGWDGDAEYSMVSSNSPALLEDVQDQVTVSEVSDALVSDGQSNGDEPATPLEDLLPEPLDLPADSDTTLQEASTNGQCESVVVVSLAKTDDPLLLPCDQPPNPDLGDKTSGTDEPLQKYVFSGTVIAETKNAAIINSMDSPVPEVNAAVSDSLQCNGSENKTNTTDILSINFPPSDTSEQEVNGCPVEQTGSLLIHKAPSSTLSSHEEEERACDELKINNKLEASELLELSNEPHVAEKQMTSVIVSICSTKDPSHSLAQKLSLEAEKVAACTAPVDAEVCTKEQPVKQEQASAQVGQQSVEADVDVTVEELSSKRQNDSGTDNENSLYYKPEINSPLSDESCVPPTSERMSKDDRAPVCSESGVIVESPDGGKGSKNSDRHQAAHLSVDNQLQKNELLSEGQRQKAEVLHHLNRANSLLNPRSEGPKRPGDLNRPLSSAEVNNPLVTQLLQGSLPLEKVLPQYHSGTKLEITRLLVPHPEIPAVKQERGLNQSTIDHVAQTTNIKSIISGVHSGINKLADYHLHKILSGDFRDLSQKRLEQMKSTVLQSSKHYLHSQMVLDRECKSLDGPVLQEQLNRTPVLTKPVEESGVITQRIVPIPCSYEEGCKELINISSGNVQSNRVHNPPVRSMPETLKQISSSTVSGYYIPNTPTFCKGLESQNTIFGSVIAKACGGLPGRQKLSHGYLHNTVLVQNDGVYRGTEVIKIQSRGSVFENMPAITQTSPDRKLIAMEGVPNVGRDWLPKLHESFKVIKTENMPPCREMNKKQDILGIKDGAYIPFDSKDKLYVGPIKMDCSIGKVMKESGLQFHHSSERSLINSQLSIQQQLYGKLPKLSLSTAGFSHLTNTTVSELSMGPFPVSLAGSMMSLSQKTNFGNHNSAIPAQTFAENSGVSEMTFKCSCRLKAMIMCKGCGAFCHDDCIGPSKLCVSCLVVR
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2232010..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2275335..2275443,2292575..2292577,2293465..2293520))
location: region:2232010-2293520:-1
so has part: feature:2293465-2293520:-1:exon
so has part: feature:2292575-2292577:-1:exon
so has part: feature:2275335-2275443:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2232010-2235303:-1:exon

XP_032897217.1
type: Protein
SIO_000068: ncbiprotein

position:2293520:-1
position: 2293520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2293465-2293520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2292575-2292577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2275335-2275443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2248127-2248293:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2232010-2235303:-1:exon

LOC116986141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group protein ASXL1-like isoform X4
translation: MLHTNSRADDGMFYRLPGRMGLYTLKKDALLWSKNMPIGDEGYDDGPDLESCDSNEASTTGEENDASPVSDESSSNASCSTETQGKQVSPGKQNSNKATQQPVKQQPKKKIGVPVMMSKSIPRVVLTPLKVNGEHVESASVFTAKHTDGESSSTSNGSSCTVTSGSTQYNRTEMNKLQCRPSLNRKPGQHFRALRRSNTAGQMKRNRGEEIDVETPGSILVNTNLRALINSRTFASLPLHFQQQLLFLLPEVDRQVGTDGIMRLSSSALNNEFFTSAAQGWKERLAEGEFTPEMQLRLRQEMEKEKKVELWKENFFEDYYGQKLGLSKAESEEQTAVKVEIEKEANSPVLAGPSKQLSPVKKQDERIRKCTRSSKVDLKCRVRRNLIADRKPEVPEQSEKAAACTVPSHDTRSQKQHNVEVKVSQAGACVDEDPLGPIDNEASPGQPKEVLPNKSALKSKATLLTEKPAETQPQERTKSDVHLELSEVQPAAISKDQVTCLTVKSAALKSQLEHNFSESKEQKRKSSEHGASTSGPEKKPRLEDHQSFRTAIDSFRTEKEQPTREEPKVPPIRIQLSRIKPPWAVKGQPAYQICPRIISSVGPSSRERTGARTLADIKARAQQARAQREAAAAAAAHVTMEGGGGGGGGGDGPASADSPRPIDRKAKVPEQAAAKHQHRAQLQQAGDADEELDKHDTDPDNSVKQGVIIEECLESNLVDAAPGKSEPAADEVQSIGWDGDAEYSMVSSNSPALLEDVQDQVTVSEVSDALVSDGQSNGDEPATPLEDLLPEPLDLPADSDTTLQEASTNGQCESVVVVSLAKTDDPLLLPCDQPPNPDLGDKTSGTDEPLQKYVFSGTVIAETKNAAIINSMDSPVPEVNAAVSDSLQCNGSENKTNTTDILSINFPPSDTSEQEVNGCPVEQTGSLLIHKAPSSTLSSHEEEERACDELKINNKLEASELLELSNEPHVAEKQMTSVIVSICSTKDPSHSLAQKLSLEAEKVAACTAPVDAEVCTKEQPVKQEQASAQVGQQSVEADVDVTVEELSSKRQNDSGTDNENSLYYKPEINSPLSDESCVPPTSERMSKDDRAPVCSESGVIVESPDGGKGSKNSDRHQAAHLSVDNQLQKNELLSEGQRQKAEVLHHLNRANSLLNPRSEGPKRPGDLNRPLSSAEVNNPLVTQLLQGSLPLEKVLPQYHSGTKLEITRLLVPHPEIPAVKQERGLNQSTIDHVAQTTNIKSIISGVHSGINKLADYHLHKILSGDFRDLSQKRLEQMKSTVLQSSKHYLHSQMVLDRECKSLDGPVLQEQLNRTPVLTKPVEESGVITQRIVPIPCSYEEGCKELINISSGNVQSNRVHNPPVRSMPETLKQISSSTVSGYYIPNTPTFCKGLESQNTIFGSVIAKACGGLPGRQKLSHGYLHNTVLVQNDGVYRGTEVIKIQSRGSVFENMPAITQTSPDRKLIAMEGVPNVGRDWLPKLHESFKVIKTENMPPCREMNKKQDILGIKDGAYIPFDSKDKLYVGPIKMDCSIGKVMKESGLQFHHSSERSLINSQLSIQQQLYGKLPKLSLSTAGFSHLTNTTVSELSMGPFPVSLAGSMMSLSQKTNFGNHNSAIPAQTFAENSGVSEMTFKCSCRLKAMIMCKGCGAFCHDDCIGPSKLCVSCLVVR
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2232010..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2275335..2275412))
location: region:2232010-2275412:-1
so has part: feature:2275335-2275412:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2232010-2235303:-1:exon

XP_032897218.1
type: Protein
SIO_000068: ncbiprotein

position:2275412:-1
position: 2275412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2275335-2275412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2248127-2248293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2232010-2235303:-1:exon

LOC116986141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group protein ASXL1-like isoform X4
translation: MLHTNSRADDGMFYRLPGRMGLYTLKKDALLWSKNMPIGDEGYDDGPDLESCDSNEASTTGEENDASPVSDESSSNASCSTETQGKQVSPGKQNSNKATQQPVKQQPKKKIGVPVMMSKSIPRVVLTPLKVNGEHVESASVFTAKHTDGESSSTSNGSSCTVTSGSTQYNRTEMNKLQCRPSLNRKPGQHFRALRRSNTAGQMKRNRGEEIDVETPGSILVNTNLRALINSRTFASLPLHFQQQLLFLLPEVDRQVGTDGIMRLSSSALNNEFFTSAAQGWKERLAEGEFTPEMQLRLRQEMEKEKKVELWKENFFEDYYGQKLGLSKAESEEQTAVKVEIEKEANSPVLAGPSKQLSPVKKQDERIRKCTRSSKVDLKCRVRRNLIADRKPEVPEQSEKAAACTVPSHDTRSQKQHNVEVKVSQAGACVDEDPLGPIDNEASPGQPKEVLPNKSALKSKATLLTEKPAETQPQERTKSDVHLELSEVQPAAISKDQVTCLTVKSAALKSQLEHNFSESKEQKRKSSEHGASTSGPEKKPRLEDHQSFRTAIDSFRTEKEQPTREEPKVPPIRIQLSRIKPPWAVKGQPAYQICPRIISSVGPSSRERTGARTLADIKARAQQARAQREAAAAAAAHVTMEGGGGGGGGGDGPASADSPRPIDRKAKVPEQAAAKHQHRAQLQQAGDADEELDKHDTDPDNSVKQGVIIEECLESNLVDAAPGKSEPAADEVQSIGWDGDAEYSMVSSNSPALLEDVQDQVTVSEVSDALVSDGQSNGDEPATPLEDLLPEPLDLPADSDTTLQEASTNGQCESVVVVSLAKTDDPLLLPCDQPPNPDLGDKTSGTDEPLQKYVFSGTVIAETKNAAIINSMDSPVPEVNAAVSDSLQCNGSENKTNTTDILSINFPPSDTSEQEVNGCPVEQTGSLLIHKAPSSTLSSHEEEERACDELKINNKLEASELLELSNEPHVAEKQMTSVIVSICSTKDPSHSLAQKLSLEAEKVAACTAPVDAEVCTKEQPVKQEQASAQVGQQSVEADVDVTVEELSSKRQNDSGTDNENSLYYKPEINSPLSDESCVPPTSERMSKDDRAPVCSESGVIVESPDGGKGSKNSDRHQAAHLSVDNQLQKNELLSEGQRQKAEVLHHLNRANSLLNPRSEGPKRPGDLNRPLSSAEVNNPLVTQLLQGSLPLEKVLPQYHSGTKLEITRLLVPHPEIPAVKQERGLNQSTIDHVAQTTNIKSIISGVHSGINKLADYHLHKILSGDFRDLSQKRLEQMKSTVLQSSKHYLHSQMVLDRECKSLDGPVLQEQLNRTPVLTKPVEESGVITQRIVPIPCSYEEGCKELINISSGNVQSNRVHNPPVRSMPETLKQISSSTVSGYYIPNTPTFCKGLESQNTIFGSVIAKACGGLPGRQKLSHGYLHNTVLVQNDGVYRGTEVIKIQSRGSVFENMPAITQTSPDRKLIAMEGVPNVGRDWLPKLHESFKVIKTENMPPCREMNKKQDILGIKDGAYIPFDSKDKLYVGPIKMDCSIGKVMKESGLQFHHSSERSLINSQLSIQQQLYGKLPKLSLSTAGFSHLTNTTVSELSMGPFPVSLAGSMMSLSQKTNFGNHNSAIPAQTFAENSGVSEMTFKCSCRLKAMIMCKGCGAFCHDDCIGPSKLCVSCLVVR
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2232010..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2275335..2275412))
location: region:2232010-2275412:-1
so has part: feature:2275335-2275412:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2232010-2235303:-1:exon

XP_032897219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2275335-2275412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2248127-2248293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2232010-2235303:-1:exon

LOC116986141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group protein ASXL1-like isoform X4
translation: MLHTNSRADDGMFYRLPGRMGLYTLKKDALLWSKNMPIGDEGYDDGPDLESCDSNEASTTGEENDASPVSDESSSNASCSTETQGKQVSPGKQNSNKATQQPVKQQPKKKIGVPVMMSKSIPRVVLTPLKVNGEHVESASVFTAKHTDGESSSTSNGSSCTVTSGSTQYNRTEMNKLQCRPSLNRKPGQHFRALRRSNTAGQMKRNRGEEIDVETPGSILVNTNLRALINSRTFASLPLHFQQQLLFLLPEVDRQVGTDGIMRLSSSALNNEFFTSAAQGWKERLAEGEFTPEMQLRLRQEMEKEKKVELWKENFFEDYYGQKLGLSKAESEEQTAVKVEIEKEANSPVLAGPSKQLSPVKKQDERIRKCTRSSKVDLKCRVRRNLIADRKPEVPEQSEKAAACTVPSHDTRSQKQHNVEVKVSQAGACVDEDPLGPIDNEASPGQPKEVLPNKSALKSKATLLTEKPAETQPQERTKSDVHLELSEVQPAAISKDQVTCLTVKSAALKSQLEHNFSESKEQKRKSSEHGASTSGPEKKPRLEDHQSFRTAIDSFRTEKEQPTREEPKVPPIRIQLSRIKPPWAVKGQPAYQICPRIISSVGPSSRERTGARTLADIKARAQQARAQREAAAAAAAHVTMEGGGGGGGGGDGPASADSPRPIDRKAKVPEQAAAKHQHRAQLQQAGDADEELDKHDTDPDNSVKQGVIIEECLESNLVDAAPGKSEPAADEVQSIGWDGDAEYSMVSSNSPALLEDVQDQVTVSEVSDALVSDGQSNGDEPATPLEDLLPEPLDLPADSDTTLQEASTNGQCESVVVVSLAKTDDPLLLPCDQPPNPDLGDKTSGTDEPLQKYVFSGTVIAETKNAAIINSMDSPVPEVNAAVSDSLQCNGSENKTNTTDILSINFPPSDTSEQEVNGCPVEQTGSLLIHKAPSSTLSSHEEEERACDELKINNKLEASELLELSNEPHVAEKQMTSVIVSICSTKDPSHSLAQKLSLEAEKVAACTAPVDAEVCTKEQPVKQEQASAQVGQQSVEADVDVTVEELSSKRQNDSGTDNENSLYYKPEINSPLSDESCVPPTSERMSKDDRAPVCSESGVIVESPDGGKGSKNSDRHQAAHLSVDNQLQKNELLSEGQRQKAEVLHHLNRANSLLNPRSEGPKRPGDLNRPLSSAEVNNPLVTQLLQGSLPLEKVLPQYHSGTKLEITRLLVPHPEIPAVKQERGLNQSTIDHVAQTTNIKSIISGVHSGINKLADYHLHKILSGDFRDLSQKRLEQMKSTVLQSSKHYLHSQMVLDRECKSLDGPVLQEQLNRTPVLTKPVEESGVITQRIVPIPCSYEEGCKELINISSGNVQSNRVHNPPVRSMPETLKQISSSTVSGYYIPNTPTFCKGLESQNTIFGSVIAKACGGLPGRQKLSHGYLHNTVLVQNDGVYRGTEVIKIQSRGSVFENMPAITQTSPDRKLIAMEGVPNVGRDWLPKLHESFKVIKTENMPPCREMNKKQDILGIKDGAYIPFDSKDKLYVGPIKMDCSIGKVMKESGLQFHHSSERSLINSQLSIQQQLYGKLPKLSLSTAGFSHLTNTTVSELSMGPFPVSLAGSMMSLSQKTNFGNHNSAIPAQTFAENSGVSEMTFKCSCRLKAMIMCKGCGAFCHDDCIGPSKLCVSCLVVR
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2232010..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263760,2275335..2275412))
location: region:2232010-2275412:-1
so has part: feature:2275335-2275412:-1:exon
so has part: feature:2263643-2263760:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2232010-2235303:-1:exon

XP_032897220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2275335-2275412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2263643-2263760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2248127-2248293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2232010-2235303:-1:exon

LOC116986141
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group protein ASXL1-like isoform X7
translation: MPIGDEGYDDGPDLESCDSNEASTTGEENDASPVSDESSSNASCSTETQGKQVSPGKQNSNKATQQPVKQQPKKKIGVPVMMSKSIPRVVLTPLKVNGEHVESASVFTAKHTDGESSSTSNGSSCTVTSGSTQYNRTEMNKLQCRPSLNRKPGQHFRALRRSNTAGQMKRNRGEEIDVETPGSILVNTNLRALINSRTFASLPLHFQQQLLFLLPEVDRQVGTDGIMRLSSSALNNEFFTSAAQGWKERLAEGEFTPEMQLRLRQEMEKEKKVELWKENFFEDYYGQKLGLSKAESEEQTAVKVEIEKEANSPVLAGPSKQLSPVKKQDERIRKCTRSSKVDLKCRVRRNLIADRKPEVPEQSEKAAACTVPSHDTRSQKQHNVEVKVSQAGACVDEDPLGPIDNEASPGQPKEVLPNKSALKSKATLLTEKPAETQPQERTKSDVHLELSEVQPAAISKDQVTCLTVKSAALKSQLEHNFSESKEQKRKSSEHGASTSGPEKKPRLEDHQSFRTAIDSFRTEKEQPTREEPKVPPIRIQLSRIKPPWAVKGQPAYQICPRIISSVGPSSRERTGARTLADIKARAQQARAQREAAAAAAAHVTMEGGGGGGGGGDGPASADSPRPIDRKAKVPEQAAAKHQHRAQLQQAGDADEELDKHDTDPDNSVKQGVIIEECLESNLVDAAPGKSEPAADEVQSIGWDGDAEYSMVSSNSPALLEDVQDQVTVSEVSDALVSDGQSNGDEPATPLEDLLPEPLDLPADSDTTLQEASTNGQCESVVVVSLAKTDDPLLLPCDQPPNPDLGDKTSGTDEPLQKYVFSGTVIAETKNAAIINSMDSPVPEVNAAVSDSLQCNGSENKTNTTDILSINFPPSDTSEQEVNGCPVEQTGSLLIHKAPSSTLSSHEEEERACDELKINNKLEASELLELSNEPHVAEKQMTSVIVSICSTKDPSHSLAQKLSLEAEKVAACTAPVDAEVCTKEQPVKQEQASAQVGQQSVEADVDVTVEELSSKRQNDSGTDNENSLYYKPEINSPLSDESCVPPTSERMSKDDRAPVCSESGVIVESPDGGKGSKNSDRHQAAHLSVDNQLQKNELLSEGQRQKAEVLHHLNRANSLLNPRSEGPKRPGDLNRPLSSAEVNNPLVTQLLQGSLPLEKVLPQYHSGTKLEITRLLVPHPEIPAVKQERGLNQSTIDHVAQTTNIKSIISGVHSGINKLADYHLHKILSGDFRDLSQKRLEQMKSTVLQSSKHYLHSQMVLDRECKSLDGPVLQEQLNRTPVLTKPVEESGVITQRIVPIPCSYEEGCKELINISSGNVQSNRVHNPPVRSMPETLKQISSSTVSGYYIPNTPTFCKGLESQNTIFGSVIAKACGGLPGRQKLSHGYLHNTVLVQNDGVYRGTEVIKIQSRGSVFENMPAITQTSPDRKLIAMEGVPNVGRDWLPKLHESFKVIKTENMPPCREMNKKQDILGIKDGAYIPFDSKDKLYVGPIKMDCSIGKVMKESGLQFHHSSERSLINSQLSIQQQLYGKLPKLSLSTAGFSHLTNTTVSELSMGPFPVSLAGSMMSLSQKTNFGNHNSAIPAQTFAENSGVSEMTFKCSCRLKAMIMCKGCGAFCHDDCIGPSKLCVSCLVVR
SIO_010081: LOC116986141
subclass of: SO_0000673
so part of: LOC116986141
location: complement(join(2232010..2235303,2238426..2239176,2243172..2243277,2244178..2244274,2248127..2248293,2252176..2252352,2253101..2253218,2261209..2261315,2263643..2263733))
location: region:2232010-2263733:-1
so has part: feature:2263643-2263733:-1:exon
so has part: feature:2261209-2261315:-1:exon
so has part: feature:2253101-2253218:-1:exon
so has part: feature:2252176-2252352:-1:exon
so has part: feature:2248127-2248293:-1:exon
so has part: feature:2244178-2244274:-1:exon
so has part: feature:2243172-2243277:-1:exon
so has part: feature:2238426-2239176:-1:exon
so has part: feature:2232010-2235303:-1:exon

XP_032897223.1
type: Protein
SIO_000068: ncbiprotein

position:2263733:-1
position: 2263733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2263643-2263733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2261209-2261315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2253101-2253218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2252176-2252352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2248127-2248293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2244178-2244274:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2243172-2243277:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2238426-2239176:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2232010-2235303:-1:exon

kif3b
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: kif3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2321248..2342260)
location: region:2321248-2342260:-1
so has part: feature:2321248-2342260:-1:exon
subclass of: SO_0000010

116986142
type: Gene
SIO_000068: ncbigene

position:2321248:-1
position: 2321248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2342260:-1
position: 2342260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2321248-2342260:-1:exon

kif3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kif3b
product: kinesin family member 3B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033041333.1
SIO_010081: kif3b
subclass of: SO_0000673
so part of: kif3b
location: complement(join(2321248..2321487,2323449..2323636,2325719..2325824,2327659..2327775,2328500..2328618,2330831..2330953,2332232..2332333,2334857..2336303,2342170..2342260))
location: region:2321248-2342260:-1
so has part: feature:2342170-2342260:-1:exon
so has part: feature:2334857-2336303:-1:exon
so has part: feature:2332232-2332333:-1:exon
so has part: feature:2330831-2330953:-1:exon
so has part: feature:2328500-2328618:-1:exon
so has part: feature:2327659-2327775:-1:exon
so has part: feature:2325719-2325824:-1:exon
so has part: feature:2323449-2323636:-1:exon
so has part: feature:2321248-2321487:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2342170-2342260:-1:exon

position:2342170:-1
position: 2342170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2334857-2336303:-1:exon

position:2334857:-1
position: 2334857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2336303:-1
position: 2336303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2332232-2332333:-1:exon

position:2332232:-1
position: 2332232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2332333:-1
position: 2332333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2330831-2330953:-1:exon

position:2330831:-1
position: 2330831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2330953:-1
position: 2330953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2328500-2328618:-1:exon

position:2328500:-1
position: 2328500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2328618:-1
position: 2328618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2327659-2327775:-1:exon

position:2327659:-1
position: 2327659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2327775:-1
position: 2327775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2325719-2325824:-1:exon

position:2325719:-1
position: 2325719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2325824:-1
position: 2325824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2323449-2323636:-1:exon

position:2323449:-1
position: 2323449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2323636:-1
position: 2323636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2321248-2321487:-1:exon

position:2321487:-1
position: 2321487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

kif3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kif3b
product: kinesin family member 3B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033041334.1
SIO_010081: kif3b
subclass of: SO_0000673
so part of: kif3b
location: complement(join(2321251..2321484,2323449..2323636,2325719..2325824,2327659..2327775,2328500..2328618,2330831..2330953,2332232..2332333,2334857..2336303))
location: region:2321251-2336303:-1
so has part: feature:2334857-2336303:-1:exon
so has part: feature:2332232-2332333:-1:exon
so has part: feature:2330831-2330953:-1:exon
so has part: feature:2328500-2328618:-1:exon
so has part: feature:2327659-2327775:-1:exon
so has part: feature:2325719-2325824:-1:exon
so has part: feature:2323449-2323636:-1:exon
so has part: feature:2321251-2321484:-1:exon

position:2321251:-1
position: 2321251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2334857-2336303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2332232-2332333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2330831-2330953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2328500-2328618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2327659-2327775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2325719-2325824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2323449-2323636:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2321251-2321484:-1:exon

position:2321484:-1
position: 2321484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

kif3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kif3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF3B isoform X2
translation: MSKLKSSESVKVVVRCRPMNDKEVAGGYAEIVHIDVKLGQILVKHPKASPSELPKTFTFDAVYDQHSKQVDLYDETFRPLVESVLLGFNGTIFAYGQTGTGKTFTMEGIRLDPERRGVIPNSFEHIFTHISRSQNQQYLVRASYLEIYQEEIKDLLAKDQTKRLELKERPDTGVYVKDLSSFVTKNVKEIEHVMNVGNQNRSVGSTNMNEHSSRSHAIFVITVECSEIGLDGENHIRVGKLNLVDLAGSERQAKTGAQGDRLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANIGPASYNCEETLTTLRYANRAKNIKNKPRVNEDPKDALLREFQEEIARLKAQLEKRGVGKRKKKNRRRQGGEGEEDIEDDDGEDEEGIKNDPEYWKAQQEKLEMEKRAIFDDHSLVAEEKQKLLHEKEKKMGDVRREREASEALATKIKAMESKLLVGGKNIVDHTNEQQKVLEQRRQEIAEQKRREREMQQQMETQDEETLELKETFSSLQQEVDVKTKKLKKLFAKLQAVKAEIDDLQAEHIKERQQLEQTQNELTRELKLKHLVIENFIPLEEKNKIMNRAYFDEEDDQWKTQPITRIEGNQQMMKRPVSAIGYKRPLSSYAKMALVSRSDPRYRAENILLLELDMPSRTTRDYEGPAIAPKVQAALEAALQDEDELQVDASTFDPLGSGSARKSKSRPKTGKKMGPSSSVGSGTQLYPQSRGLVPK
SIO_010081: kif3b
subclass of: SO_0000673
so part of: kif3b
location: complement(join(2321394..2321484,2323449..2323636,2325719..2325824,2327659..2327775,2328500..2328618,2330831..2330953,2332232..2332333,2334857..2336251))
location: region:2321394-2336251:-1
so has part: feature:2334857-2336251:-1:exon
so has part: feature:2332232-2332333:-1:exon
so has part: feature:2330831-2330953:-1:exon
so has part: feature:2328500-2328618:-1:exon
so has part: feature:2327659-2327775:-1:exon
so has part: feature:2325719-2325824:-1:exon
so has part: feature:2323449-2323636:-1:exon
so has part: feature:2321394-2321484:-1:exon

XP_032897225.1
type: Protein
SIO_000068: ncbiprotein

position:2321394:-1
position: 2321394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2336251:-1
position: 2336251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2334857-2336251:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2332232-2332333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2330831-2330953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2328500-2328618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2327659-2327775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2325719-2325824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2323449-2323636:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2321394-2321484:-1:exon

kif3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kif3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF3B isoform X1
translation: MSKLKSSESVKVVVRCRPMNDKEVAGGYAEIVHIDVKLGQILVKHPKASPSELPKTFTFDAVYDQHSKQVDLYDETFRPLVESVLLGFNGTIFAYGQTGTGKTFTMEGIRLDPERRGVIPNSFEHIFTHISRSQNQQYLVRASYLEIYQEEIKDLLAKDQTKRLELKERPDTGVYVKDLSSFVTKNVKEIEHVMNVGNQNRSVGSTNMNEHSSRSHAIFVITVECSEIGLDGENHIRVGKLNLVDLAGSERQAKTGAQGDRLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANIGPASYNCEETLTTLRYANRAKNIKNKPRVNEDPKDALLREFQEEIARLKAQLEKRGVGKRKKKNRRRQGGEGEEDIEDDDGEDEEGIKNDPEYWKAQQEKLEMEKRAIFDDHSLVAEEKQKLLHEKEKKMGDVRREREASEALATKIKAMESKLLVGGKNIVDHTNEQQKVLEQRRQEIAEQKRREREMQQQMETQDEETLELKETFSSLQQEVDVKTKKLKKLFAKLQAVKAEIDDLQAEHIKERQQLEQTQNELTRELKLKHLVIENFIPLEEKNKIMNRAYFDEEDDQWKTQPITRIEGNQQMMKRPVSAIGYKRPLSSYAKMALVSRSDPRYRAENILLLELDMPSRTTRDYEGPAIAPKVQAALEAALQDEDELQVDASTFDPLGSGSARKSKSSRPKTGKKMGPSSSVGSGTQLYPQSRGLVPK
SIO_010081: kif3b
subclass of: SO_0000673
so part of: kif3b
location: complement(join(2321394..2321487,2323449..2323636,2325719..2325824,2327659..2327775,2328500..2328618,2330831..2330953,2332232..2332333,2334857..2336251))
location: region:2321394-2336251:-1
so has part: feature:2334857-2336251:-1:exon
so has part: feature:2332232-2332333:-1:exon
so has part: feature:2330831-2330953:-1:exon
so has part: feature:2328500-2328618:-1:exon
so has part: feature:2327659-2327775:-1:exon
so has part: feature:2325719-2325824:-1:exon
so has part: feature:2323449-2323636:-1:exon
so has part: feature:2321394-2321487:-1:exon

XP_032897224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2334857-2336251:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2332232-2332333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2330831-2330953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2328500-2328618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2327659-2327775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2325719-2325824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2323449-2323636:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2321394-2321487:-1:exon

LOC116986144
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2403571..2461531
location: region:2403571-2461531:1
so has part: feature:2403571-2461531:1:exon
subclass of: SO_0000010

116986144
type: Gene
SIO_000068: ncbigene

position:2403571:1
position: 2403571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2461531:1
position: 2461531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2403571-2461531:1:exon

LOC116986144
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986144
product: zinc finger protein PLAG1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033041338.1
SIO_010081: LOC116986144
subclass of: SO_0000673
so part of: LOC116986144
location: join(2403571..2403728,2446461..2446590,2451829..2451962,2459852..2461531)
location: region:2403571-2461531:1
so has part: feature:2403571-2403728:1:exon
so has part: feature:2446461-2446590:1:exon
so has part: feature:2451829-2451962:1:exon
so has part: feature:2459852-2461531:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2403571-2403728:1:exon

position:2403728:1
position: 2403728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2446461-2446590:1:exon

position:2446461:1
position: 2446461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2446590:1
position: 2446590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2451829-2451962:1:exon

position:2451829:1
position: 2451829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2451962:1
position: 2451962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2459852-2461531:1:exon

position:2459852:1
position: 2459852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116986144
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986144
product: zinc finger protein PLAG1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033041339.1
SIO_010081: LOC116986144
subclass of: SO_0000673
so part of: LOC116986144
location: join(2403571..2403728,2446461..2446590,2459852..2461531)
location: region:2403571-2461531:1
so has part: feature:2403571-2403728:1:exon
so has part: feature:2446461-2446590:1:exon
so has part: feature:2459852-2461531:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2403571-2403728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2446461-2446590:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2459852-2461531:1:exon

LOC116986144
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986144
product: zinc finger protein PLAG1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_033041337.1
SIO_010081: LOC116986144
subclass of: SO_0000673
so part of: LOC116986144
location: join(2451969..2452259,2459852..2461531)
location: region:2451969-2461531:1
so has part: feature:2451969-2452259:1:exon
so has part: feature:2459852-2461531:1:exon

position:2451969:1
position: 2451969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2451969-2452259:1:exon

position:2452259:1
position: 2452259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2459852-2461531:1:exon

LOC116986144
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein PLAG1-like isoform X1
translation: MAALASADLSQISITEQTENALEAKWKGKESKPRRALECLVCGAFFSSLDKRKVHSYSHTGERPYKCSHPECTKAFVSKYKLLRHMATHSPQKIHKCTYCEKMFHRKDHLKNHLQTHDPNKEAFKCEECGKNYNTKLGYKRHLALHAATNGDLTCKVCLQTFETTEVLLEHLKTHSGKSSGGVKEKKHQCDHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHSQELLKIKTEPADMMGLIHCSPPVTIKEEHTPMMCMASKETAGKPFTSLPMSMYSSHIQAMTNSGSSHSLVASSLAMGMGCQMDTVSSIHSAPQPHSKYQIGSTSYATGLPDKPTKIEMESYLMDLHSSLPLSSHESAPAKVGLDSQSGSLDDMSGEHLLSKGPAIITESLCTANMDFSHLLSFLPLNHPAYNTPVSAGGLVMGYAQSEPQSLLASLQPQLQDSQGSGNGLSLGPLHPLSPVFTSSLSTTTLPRFHQAFQ
SIO_010081: LOC116986144
subclass of: SO_0000673
so part of: LOC116986144
location: join(2452009..2452259,2459852..2461100)
location: region:2452009-2461100:1
so has part: feature:2452009-2452259:1:exon
so has part: feature:2459852-2461100:1:exon

XP_032897228.1
type: Protein
SIO_000068: ncbiprotein

position:2452009:1
position: 2452009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2461100:1
position: 2461100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2452009-2452259:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2459852-2461100:1:exon

LOC116986144
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein PLAG1-like isoform X2
translation: MATHSPQKIHKCTYCEKMFHRKDHLKNHLQTHDPNKEAFKCEECGKNYNTKLGYKRHLALHAATNGDLTCKVCLQTFETTEVLLEHLKTHSGKSSGGVKEKKHQCDHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHSQELLKIKTEPADMMGLIHCSPPVTIKEEHTPMMCMASKETAGKPFTSLPMSMYSSHIQAMTNSGSSHSLVASSLAMGMGCQMDTVSSIHSAPQPHSKYQIGSTSYATGLPDKPTKIEMESYLMDLHSSLPLSSHESAPAKVGLDSQSGSLDDMSGEHLLSKGPAIITESLCTANMDFSHLLSFLPLNHPAYNTPVSAGGLVMGYAQSEPQSLLASLQPQLQDSQGSGNGLSLGPLHPLSPVFTSSLSTTTLPRFHQAFQ
SIO_010081: LOC116986144
subclass of: SO_0000673
so part of: LOC116986144
location: 2459856..2461100
location: region:2459856-2461100:1
so has part: feature:2459856-2461100:1:exon

XP_032897229.1
type: Protein
SIO_000068: ncbiprotein

position:2459856:1
position: 2459856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2459856-2461100:1:exon

LOC116986144
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein PLAG1-like isoform X2
translation: MATHSPQKIHKCTYCEKMFHRKDHLKNHLQTHDPNKEAFKCEECGKNYNTKLGYKRHLALHAATNGDLTCKVCLQTFETTEVLLEHLKTHSGKSSGGVKEKKHQCDHCDRRFYTRKDVRRHMVVHTGRKDFLCQYCAQRFGRKDHLTRHMKKSHSQELLKIKTEPADMMGLIHCSPPVTIKEEHTPMMCMASKETAGKPFTSLPMSMYSSHIQAMTNSGSSHSLVASSLAMGMGCQMDTVSSIHSAPQPHSKYQIGSTSYATGLPDKPTKIEMESYLMDLHSSLPLSSHESAPAKVGLDSQSGSLDDMSGEHLLSKGPAIITESLCTANMDFSHLLSFLPLNHPAYNTPVSAGGLVMGYAQSEPQSLLASLQPQLQDSQGSGNGLSLGPLHPLSPVFTSSLSTTTLPRFHQAFQ
SIO_010081: LOC116986144
subclass of: SO_0000673
so part of: LOC116986144
location: 2459856..2461100
location: region:2459856-2461100:1
so has part: feature:2459856-2461100:1:exon

XP_032897230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2459856-2461100:1:exon

tm9sf4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tm9sf4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2465567..2518875)
location: region:2465567-2518875:-1
so has part: feature:2465567-2518875:-1:exon
subclass of: SO_0000010

116986143
type: Gene
SIO_000068: ncbigene

position:2465567:-1
position: 2465567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2518875:-1
position: 2518875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2465567-2518875:-1:exon

tm9sf4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tm9sf4
product: transmembrane 9 superfamily member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_033041336.1
SIO_010081: tm9sf4
subclass of: SO_0000673
so part of: tm9sf4
location: complement(join(2465567..2470600,2472336..2472425,2474156..2474275,2474757..2474820,2477480..2477655,2478849..2478932,2481082..2481157,2483391..2483472,2484632..2484764,2488242..2488312,2494656..2494767,2495719..2495837,2497721..2497844,2498102..2498231,2498866..2499034,2500383..2500482,2502288..2502401,2518808..2518875))
location: region:2465567-2518875:-1
so has part: feature:2518808-2518875:-1:exon
so has part: feature:2502288-2502401:-1:exon
so has part: feature:2500383-2500482:-1:exon
so has part: feature:2498866-2499034:-1:exon
so has part: feature:2498102-2498231:-1:exon
so has part: feature:2497721-2497844:-1:exon
so has part: feature:2495719-2495837:-1:exon
so has part: feature:2494656-2494767:-1:exon
so has part: feature:2488242-2488312:-1:exon
so has part: feature:2484632-2484764:-1:exon
so has part: feature:2483391-2483472:-1:exon
so has part: feature:2481082-2481157:-1:exon
so has part: feature:2478849-2478932:-1:exon
so has part: feature:2477480-2477655:-1:exon
so has part: feature:2474757-2474820:-1:exon
so has part: feature:2474156-2474275:-1:exon
so has part: feature:2472336-2472425:-1:exon
so has part: feature:2465567-2470600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2518808-2518875:-1:exon

position:2518808:-1
position: 2518808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2502288-2502401:-1:exon

position:2502288:-1
position: 2502288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2502401:-1
position: 2502401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2500383-2500482:-1:exon

position:2500383:-1
position: 2500383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2500482:-1
position: 2500482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2498866-2499034:-1:exon

position:2498866:-1
position: 2498866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2499034:-1
position: 2499034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2498102-2498231:-1:exon

position:2498102:-1
position: 2498102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2498231:-1
position: 2498231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2497721-2497844:-1:exon

position:2497721:-1
position: 2497721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2497844:-1
position: 2497844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2495719-2495837:-1:exon

position:2495719:-1
position: 2495719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2495837:-1
position: 2495837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2494656-2494767:-1:exon

position:2494656:-1
position: 2494656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2494767:-1
position: 2494767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2488242-2488312:-1:exon

position:2488242:-1
position: 2488242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2488312:-1
position: 2488312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2484632-2484764:-1:exon

position:2484632:-1
position: 2484632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2484764:-1
position: 2484764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2483391-2483472:-1:exon

position:2483391:-1
position: 2483391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2483472:-1
position: 2483472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2481082-2481157:-1:exon

position:2481082:-1
position: 2481082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2481157:-1
position: 2481157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2478849-2478932:-1:exon

position:2478849:-1
position: 2478849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2478932:-1
position: 2478932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2477480-2477655:-1:exon

position:2477480:-1
position: 2477480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2477655:-1
position: 2477655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2474757-2474820:-1:exon

position:2474757:-1
position: 2474757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2474820:-1
position: 2474820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2474156-2474275:-1:exon

position:2474156:-1
position: 2474156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2474275:-1
position: 2474275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2472336-2472425:-1:exon

position:2472336:-1
position: 2472336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2472425:-1
position: 2472425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2465567-2470600:-1:exon

position:2470600:-1
position: 2470600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tm9sf4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tm9sf4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 9 superfamily member 4
translation: MAARRAMSIWPLVLLLELHTSSTFYVPGVAPIDFHQNHPVEIKAVKLTSSRTQLPYEYYSLPFCRPDKIEYKAENLGEVLRGDRIVNTPYDMHMNVEKKCEVLCGKPNKPVKFKIADSKLVVERIQEEYYIHLIADNLPVATRLEFYPNSEDNDKKKEKEVQFEHGYRLGFIDNNKFYLHNHLSFIVYYHKEEIEIDQEPTYRVVRFEVVPQSVKYEDLKMDEKGNCILPEAAGSLPQEIDPNKENDVLFTYSVHWEGSPIKWASRWDTYLTMSDVQIHWFSIVNSVVVVFFLSGILSMIIIRTLRKDIANYNREDDIEDTMEESGWKLVHGDVFRPPHYPMILSSLLGSGIQLFCMILIVIIVAMLGMLSPSSRGALMTTACFLFMFMGLFGGYFAGRLYRTLKGHRWRKGAFCTATLYPGIVFGLCFVLNCFIWGKHSSGAVPFPTMLALLCMWFGISLPLVYLGYYFGFRKQPYDNPVRTNQIPRQVPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRTFMVSGGSAFYVLIYAIFYFVNKLDIVEFIPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFIRKIYAAVKID
SIO_010081: tm9sf4
subclass of: SO_0000673
so part of: tm9sf4
location: complement(join(2470451..2470600,2472336..2472425,2474156..2474275,2474757..2474820,2477480..2477655,2478849..2478932,2481082..2481157,2483391..2483472,2484632..2484764,2488242..2488312,2494656..2494767,2495719..2495837,2497721..2497844,2498102..2498231,2498866..2499034,2500383..2500482,2502288..2502401,2518808..2518822))
location: region:2470451-2518822:-1
so has part: feature:2518808-2518822:-1:exon
so has part: feature:2502288-2502401:-1:exon
so has part: feature:2500383-2500482:-1:exon
so has part: feature:2498866-2499034:-1:exon
so has part: feature:2498102-2498231:-1:exon
so has part: feature:2497721-2497844:-1:exon
so has part: feature:2495719-2495837:-1:exon
so has part: feature:2494656-2494767:-1:exon
so has part: feature:2488242-2488312:-1:exon
so has part: feature:2484632-2484764:-1:exon
so has part: feature:2483391-2483472:-1:exon
so has part: feature:2481082-2481157:-1:exon
so has part: feature:2478849-2478932:-1:exon
so has part: feature:2477480-2477655:-1:exon
so has part: feature:2474757-2474820:-1:exon
so has part: feature:2474156-2474275:-1:exon
so has part: feature:2472336-2472425:-1:exon
so has part: feature:2470451-2470600:-1:exon

XP_032897227.1
type: Protein
SIO_000068: ncbiprotein

position:2470451:-1
position: 2470451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2518822:-1
position: 2518822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2518808-2518822:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2502288-2502401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2500383-2500482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2498866-2499034:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2498102-2498231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2497721-2497844:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2495719-2495837:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2494656-2494767:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2488242-2488312:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2484632-2484764:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2483391-2483472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2481082-2481157:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2478849-2478932:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2477480-2477655:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2474757-2474820:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2474156-2474275:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2472336-2472425:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2470451-2470600:-1:exon

hck
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: hck
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2534854..2609864)
location: region:2534854-2609864:-1
so has part: feature:2534854-2609864:-1:exon
subclass of: SO_0000010

116986145
type: Gene
SIO_000068: ncbigene

position:2534854:-1
position: 2534854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2609864:-1
position: 2609864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2534854-2609864:-1:exon

hck
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hck
product: HCK proto-oncogene, Src family tyrosine kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033041342.1
SIO_010081: hck
subclass of: SO_0000673
so part of: hck
location: complement(join(2534854..2535406,2537905..2538036,2540713..2540866,2549236..2549312,2558122..2558304,2565774..2565926,2568122..2568271,2569344..2569447,2570607..2570705,2572508..2572607,2574382..2574424,2576657..2576777,2609609..2609864))
location: region:2534854-2609864:-1
so has part: feature:2609609-2609864:-1:exon
so has part: feature:2576657-2576777:-1:exon
so has part: feature:2574382-2574424:-1:exon
so has part: feature:2572508-2572607:-1:exon
so has part: feature:2570607-2570705:-1:exon
so has part: feature:2569344-2569447:-1:exon
so has part: feature:2568122-2568271:-1:exon
so has part: feature:2565774-2565926:-1:exon
so has part: feature:2558122-2558304:-1:exon
so has part: feature:2549236-2549312:-1:exon
so has part: feature:2540713-2540866:-1:exon
so has part: feature:2537905-2538036:-1:exon
so has part: feature:2534854-2535406:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2609609-2609864:-1:exon

position:2609609:-1
position: 2609609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2576657-2576777:-1:exon

position:2576657:-1
position: 2576657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2576777:-1
position: 2576777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2574382-2574424:-1:exon

position:2574382:-1
position: 2574382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2574424:-1
position: 2574424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2572508-2572607:-1:exon

position:2572508:-1
position: 2572508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2572607:-1
position: 2572607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2570607-2570705:-1:exon

position:2570607:-1
position: 2570607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2570705:-1
position: 2570705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2569344-2569447:-1:exon

position:2569344:-1
position: 2569344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2569447:-1
position: 2569447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2568122-2568271:-1:exon

position:2568122:-1
position: 2568122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2568271:-1
position: 2568271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2565774-2565926:-1:exon

position:2565774:-1
position: 2565774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2565926:-1
position: 2565926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2558122-2558304:-1:exon

position:2558122:-1
position: 2558122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2558304:-1
position: 2558304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2549236-2549312:-1:exon

position:2549236:-1
position: 2549236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2549312:-1
position: 2549312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2540713-2540866:-1:exon

position:2540713:-1
position: 2540713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2540866:-1
position: 2540866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2537905-2538036:-1:exon

position:2537905:-1
position: 2537905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2538036:-1
position: 2538036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2534854-2535406:-1:exon

position:2535406:-1
position: 2535406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hck
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hck
product: HCK proto-oncogene, Src family tyrosine kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033041341.1
SIO_010081: hck
subclass of: SO_0000673
so part of: hck
location: complement(join(2534854..2535406,2537905..2538036,2540713..2540866,2549236..2549312,2558122..2558304,2565774..2565926,2568122..2568271,2569344..2569447,2570607..2570705,2572508..2572607,2574382..2574424,2576657..2576774,2580616..2580631))
location: region:2534854-2580631:-1
so has part: feature:2580616-2580631:-1:exon
so has part: feature:2576657-2576774:-1:exon
so has part: feature:2574382-2574424:-1:exon
so has part: feature:2572508-2572607:-1:exon
so has part: feature:2570607-2570705:-1:exon
so has part: feature:2569344-2569447:-1:exon
so has part: feature:2568122-2568271:-1:exon
so has part: feature:2565774-2565926:-1:exon
so has part: feature:2558122-2558304:-1:exon
so has part: feature:2549236-2549312:-1:exon
so has part: feature:2540713-2540866:-1:exon
so has part: feature:2537905-2538036:-1:exon
so has part: feature:2534854-2535406:-1:exon

position:2580631:-1
position: 2580631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2580616-2580631:-1:exon

position:2580616:-1
position: 2580616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2576657-2576774:-1:exon

position:2576774:-1
position: 2576774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2574382-2574424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2572508-2572607:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2570607-2570705:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2569344-2569447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2568122-2568271:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2565774-2565926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2558122-2558304:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2549236-2549312:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2540713-2540866:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2537905-2538036:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2534854-2535406:-1:exon

hck
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hck
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase HCK
translation: MGCAKSKDSVDLQEKSVHDPVGKSQTALYVKDPTRPNNPISNNVLSTNNSSSGGTDDMVVVALYDYDGIHEGDLSFKKGEKVKVISQQDEWWLGLSLATKQEGYIPSNYFAKVNSLETEDWFFKGVSRKDAERQLLASGNKLGSFMIRDSETTKGSYSLSVRDYDPANGETVKHYKIRTLDNGGFYISPRITFTDLNELVNHYKHIGDGLCQKLTKACLSEKPEKPWEKDAWEIPRESLRLEKKLGAGQFGEVWLATFKNHTKVAVKTMKPGTMSVEAFLMEANLMKALQHDKLVRLNAVVTKEEPIYIITELMSKGSLLDFLKSEEGNRIQLPKLIDFSAQIAEGMAYIESKNYIHRDLRAANILVSSMLVCKIADFGLARIIEDNEYTAREGAKFPIKWTSPEAINFGSFTIKSDVWSFGIVLMETITYGRTPYPGMSNPDVIRSLEHGYRMPRPDVCPTELYDIMMKCWKNKPEDRPTFEYLQSVLEDFYTATESQYQQQP
SIO_010081: hck
subclass of: SO_0000673
so part of: hck
location: complement(join(2535204..2535406,2537905..2538036,2540713..2540866,2549236..2549312,2558122..2558304,2565774..2565926,2568122..2568271,2569344..2569447,2570607..2570705,2572508..2572607,2574382..2574424,2576657..2576773))
location: region:2535204-2576773:-1
so has part: feature:2576657-2576773:-1:exon
so has part: feature:2574382-2574424:-1:exon
so has part: feature:2572508-2572607:-1:exon
so has part: feature:2570607-2570705:-1:exon
so has part: feature:2569344-2569447:-1:exon
so has part: feature:2568122-2568271:-1:exon
so has part: feature:2565774-2565926:-1:exon
so has part: feature:2558122-2558304:-1:exon
so has part: feature:2549236-2549312:-1:exon
so has part: feature:2540713-2540866:-1:exon
so has part: feature:2537905-2538036:-1:exon
so has part: feature:2535204-2535406:-1:exon

XP_032897232.1
type: Protein
SIO_000068: ncbiprotein

position:2535204:-1
position: 2535204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2576773:-1
position: 2576773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2576657-2576773:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2574382-2574424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2572508-2572607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2570607-2570705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2569344-2569447:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2568122-2568271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2565774-2565926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2558122-2558304:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2549236-2549312:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2540713-2540866:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2537905-2538036:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2535204-2535406:-1:exon

hck
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hck
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase HCK
translation: MGCAKSKDSVDLQEKSVHDPVGKSQTALYVKDPTRPNNPISNNVLSTNNSSSGGTDDMVVVALYDYDGIHEGDLSFKKGEKVKVISQQDEWWLGLSLATKQEGYIPSNYFAKVNSLETEDWFFKGVSRKDAERQLLASGNKLGSFMIRDSETTKGSYSLSVRDYDPANGETVKHYKIRTLDNGGFYISPRITFTDLNELVNHYKHIGDGLCQKLTKACLSEKPEKPWEKDAWEIPRESLRLEKKLGAGQFGEVWLATFKNHTKVAVKTMKPGTMSVEAFLMEANLMKALQHDKLVRLNAVVTKEEPIYIITELMSKGSLLDFLKSEEGNRIQLPKLIDFSAQIAEGMAYIESKNYIHRDLRAANILVSSMLVCKIADFGLARIIEDNEYTAREGAKFPIKWTSPEAINFGSFTIKSDVWSFGIVLMETITYGRTPYPGMSNPDVIRSLEHGYRMPRPDVCPTELYDIMMKCWKNKPEDRPTFEYLQSVLEDFYTATESQYQQQP
SIO_010081: hck
subclass of: SO_0000673
so part of: hck
location: complement(join(2535204..2535406,2537905..2538036,2540713..2540866,2549236..2549312,2558122..2558304,2565774..2565926,2568122..2568271,2569344..2569447,2570607..2570705,2572508..2572607,2574382..2574424,2576657..2576773))
location: region:2535204-2576773:-1
so has part: feature:2576657-2576773:-1:exon
so has part: feature:2574382-2574424:-1:exon
so has part: feature:2572508-2572607:-1:exon
so has part: feature:2570607-2570705:-1:exon
so has part: feature:2569344-2569447:-1:exon
so has part: feature:2568122-2568271:-1:exon
so has part: feature:2565774-2565926:-1:exon
so has part: feature:2558122-2558304:-1:exon
so has part: feature:2549236-2549312:-1:exon
so has part: feature:2540713-2540866:-1:exon
so has part: feature:2537905-2538036:-1:exon
so has part: feature:2535204-2535406:-1:exon

XP_032897233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2576657-2576773:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2574382-2574424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2572508-2572607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2570607-2570705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2569344-2569447:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2568122-2568271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2565774-2565926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2558122-2558304:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2549236-2549312:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2540713-2540866:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2537905-2538036:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2535204-2535406:-1:exon

ccm2l
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ccm2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2644387..2660120)
location: region:2644387-2660120:-1
so has part: feature:2644387-2660120:-1:exon
subclass of: SO_0000010

116986146
type: Gene
SIO_000068: ncbigene

position:2644387:-1
position: 2644387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2660120:-1
position: 2660120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2644387-2660120:-1:exon

ccm2l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ccm2l
product: CCM2 like scaffold protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033041343.1
SIO_010081: ccm2l
subclass of: SO_0000673
so part of: ccm2l
location: complement(join(2644387..2645598,2648646..2648784,2654886..2655033,2655168..2655231,2657996..2658131,2659910..2660120))
location: region:2644387-2660120:-1
so has part: feature:2659910-2660120:-1:exon
so has part: feature:2657996-2658131:-1:exon
so has part: feature:2655168-2655231:-1:exon
so has part: feature:2654886-2655033:-1:exon
so has part: feature:2648646-2648784:-1:exon
so has part: feature:2644387-2645598:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2659910-2660120:-1:exon

position:2659910:-1
position: 2659910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2657996-2658131:-1:exon

position:2657996:-1
position: 2657996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2658131:-1
position: 2658131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2655168-2655231:-1:exon

position:2655168:-1
position: 2655168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2655231:-1
position: 2655231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2654886-2655033:-1:exon

position:2654886:-1
position: 2654886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2655033:-1
position: 2655033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2648646-2648784:-1:exon

position:2648646:-1
position: 2648646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2648784:-1
position: 2648784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2644387-2645598:-1:exon

position:2645598:-1
position: 2645598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ccm2l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ccm2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebral cavernous malformations 2 protein-like
translation: MNVVVFYLPLGLGVAAVAAGGSLERRPASGGGGGGVPDGQEAAPSVENHCNLVILAMGSRDSAEEYCALICQVFRIIYGDQTIECVDRSGKNYTSTPDRRWLMERSNSGQTTETYGYEADFSCCSSFNGSQDMFDPYCRDSSSPSCHDSQLSLGTVGSESDQSHTGADLLQDYMATLRTKLSPEEIQQFALLLRDYRTGASVEDYCAELLQLYGEKRKFLLLGMRAFIPDHDASYFEGFLDTIGIKDGRGILTDSFGRIKRSMSDSSASAVRSYDSWSVPTDSDGFERIISNITHDIEALGCDAEDDLL
SIO_010081: ccm2l
subclass of: SO_0000673
so part of: ccm2l
location: complement(join(2645336..2645598,2648646..2648784,2654886..2655033,2655168..2655231,2657996..2658131,2659910..2660089))
location: region:2645336-2660089:-1
so has part: feature:2659910-2660089:-1:exon
so has part: feature:2657996-2658131:-1:exon
so has part: feature:2655168-2655231:-1:exon
so has part: feature:2654886-2655033:-1:exon
so has part: feature:2648646-2648784:-1:exon
so has part: feature:2645336-2645598:-1:exon

XP_032897234.1
type: Protein
SIO_000068: ncbiprotein

position:2645336:-1
position: 2645336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2660089:-1
position: 2660089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2659910-2660089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2657996-2658131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2655168-2655231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2654886-2655033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2648646-2648784:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2645336-2645598:-1:exon

xkr7
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: xkr7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2685559..2805775)
location: region:2685559-2805775:-1
so has part: feature:2685559-2805775:-1:exon
subclass of: SO_0000010

116986054
type: Gene
SIO_000068: ncbigene

position:2685559:-1
position: 2685559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2805775:-1
position: 2805775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2685559-2805775:-1:exon

xkr7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: xkr7
product: XK related 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033041233.1
SIO_010081: xkr7
subclass of: SO_0000673
so part of: xkr7
location: complement(join(2685559..2687237,2692754..2692953,2805180..2805775))
location: region:2685559-2805775:-1
so has part: feature:2805180-2805775:-1:exon
so has part: feature:2692754-2692953:-1:exon
so has part: feature:2685559-2687237:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2805180-2805775:-1:exon

position:2805180:-1
position: 2805180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2692754-2692953:-1:exon

position:2692754:-1
position: 2692754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2692953:-1
position: 2692953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2685559-2687237:-1:exon

position:2687237:-1
position: 2687237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

xkr7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: xkr7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 7
translation: MAAQSDGTGGSVPPLLPLPPLLDLGQRPCDGDRNGDGSAGGPGAAGPSCCHSSCVHSVIRQRRRYSLADCCWVLSSLLVFFSDGATDVWLAADYYLRGHFWWFGLTLVFVVVPSLVVQVLSFRWFVYDYSSSQPRGEAAAAAGSGAPAGGGGSDQGPAVQHFSTMESGARPARTSSCCRLCMWLFQSLVHILQLGQVWRYLRAMYLGIQSRWHREHERRHFYWRMMFESADINMLRLLETFLKSAPQLVLQLSIMVQRNHIGSLQGLSAAASLLSLAWMIASYQKILRDSRDDKMPMTYMAAITQILWHLFTIAARVIAFSLFASVFQLYFGIFIVSHWCIMTFWIIHGETDFCMSKWEEIIYNMVVGIIYIFCWFNVKEGRTRCRMFTYYFITFLENAALTVLWYLYRDSPITDFEALIIVCVVFSSFALGIFFMFIYYGALHPNGPMFGSQGGCIDGGEQEAVTHIPAQVITSPPRAMTQCRTTMGEQVPPAERDSCMPVFQVRPNIPPPSVPRMLRTEGPVIRIDLPRKRYPAWDAHFIDRRLRKTILALEYTSPTTPCLQYSNISFTHEVLEYETTV
SIO_010081: xkr7
subclass of: SO_0000673
so part of: xkr7
location: complement(join(2686288..2687237,2692754..2692953,2805180..2805775))
location: region:2686288-2805775:-1
so has part: feature:2805180-2805775:-1:exon
so has part: feature:2692754-2692953:-1:exon
so has part: feature:2686288-2687237:-1:exon

XP_032897124.1
type: Protein
SIO_000068: ncbiprotein

position:2686288:-1
position: 2686288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2805180-2805775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2692754-2692953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2686288-2687237:-1:exon

sox18
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: sox18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2897010..2901952)
location: region:2897010-2901952:-1
so has part: feature:2897010-2901952:-1:exon
subclass of: SO_0000010

116986147
type: Gene
SIO_000068: ncbigene

position:2897010:-1
position: 2897010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2901952:-1
position: 2901952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2897010-2901952:-1:exon

sox18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: sox18
product: SRY-box transcription factor 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_033041345.1
SIO_010081: sox18
subclass of: SO_0000673
so part of: sox18
location: complement(join(2897010..2898856,2901517..2901952))
location: region:2897010-2901952:-1
so has part: feature:2901517-2901952:-1:exon
so has part: feature:2897010-2898856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2901517-2901952:-1:exon

position:2901517:-1
position: 2901517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2897010-2898856:-1:exon

position:2898856:-1
position: 2898856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sox18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: sox18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-18
translation: MSISEAEYCRVEDSQPPRGAGLDTAASPWARGESAAASQPTTTPATVVAASKAEGNGDSESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKSLPFDEKRPFVEEAERLRVQHLQDHPNYKYRPRRKKASKKVKRMEGSLLAHGLTRPHGPALRTRAGAGGDRYSRGQSEPRAGGQHHQLASLAHYRDLHGLGSEFDNYGLPTPEMSPLDALDPVFFPTHAQEDGNVSYAAYHHHHHLDYTTREKADALSYPDQMSANVAELVRNPQHLYYSQMCHGGQGLLGHLSPPPEAPQHLDNNVEHFGPTELWTDVDRSEFDQYLNLARTRAADNSGQTFHVALSKLNPRGCEESSFISVLSDASNAVYYSACLSG
SIO_010081: sox18
subclass of: SO_0000673
so part of: sox18
location: complement(join(2898003..2898856,2901517..2901808))
location: region:2898003-2901808:-1
so has part: feature:2901517-2901808:-1:exon
so has part: feature:2898003-2898856:-1:exon

XP_032897236.1
type: Protein
SIO_000068: ncbiprotein

position:2898003:-1
position: 2898003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2901808:-1
position: 2901808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2901517-2901808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2898003-2898856:-1:exon

LOC116986148
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2967385..2991896
location: region:2967385-2991896:1
so has part: feature:2967385-2991896:1:exon
subclass of: SO_0000010

116986148
type: Gene
SIO_000068: ncbigene

position:2967385:1
position: 2967385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2991896:1
position: 2991896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2967385-2991896:1:exon

LOC116986148
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986148
product: transcription elongation factor A protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033041346.1
SIO_010081: LOC116986148
subclass of: SO_0000673
so part of: LOC116986148
location: join(2967385..2967631,2969913..2969975,2971546..2971651,2979332..2979419,2981742..2981872,2983616..2983672,2985776..2985930,2987343..2987489,2987914..2987985,2990912..2991896)
location: region:2967385-2991896:1
so has part: feature:2967385-2967631:1:exon
so has part: feature:2969913-2969975:1:exon
so has part: feature:2971546-2971651:1:exon
so has part: feature:2979332-2979419:1:exon
so has part: feature:2981742-2981872:1:exon
so has part: feature:2983616-2983672:1:exon
so has part: feature:2985776-2985930:1:exon
so has part: feature:2987343-2987489:1:exon
so has part: feature:2987914-2987985:1:exon
so has part: feature:2990912-2991896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2967385-2967631:1:exon

position:2967631:1
position: 2967631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2969913-2969975:1:exon

position:2969913:1
position: 2969913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2969975:1
position: 2969975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2971546-2971651:1:exon

position:2971546:1
position: 2971546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2971651:1
position: 2971651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2979332-2979419:1:exon

position:2979332:1
position: 2979332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2979419:1
position: 2979419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2981742-2981872:1:exon

position:2981742:1
position: 2981742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2981872:1
position: 2981872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2983616-2983672:1:exon

position:2983616:1
position: 2983616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2983672:1
position: 2983672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2985776-2985930:1:exon

position:2985776:1
position: 2985776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2985930:1
position: 2985930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2987343-2987489:1:exon

position:2987343:1
position: 2987343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2987489:1
position: 2987489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2987914-2987985:1:exon

position:2987914:1
position: 2987914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2987985:1
position: 2987985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2990912-2991896:1:exon

position:2990912:1
position: 2990912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116986148
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor A protein 1-like isoform X1
translation: MGKLEEIVRIAKKMDKMVSKKNTNGAIDLLKELKSIPMTLDLLQSTRVGMSVNAVRKQSTDEEVTTLAKSLIKSWKKLLDGPAGDKEAEDKKKECSTSSKNSSDSTEQSSSKRPEQRTPITPKMTSFPPIPVTSDTVRNKCRELLSAALQTDNDYVAIGTDCEHMAAQIEEIVFQEMSNTDMKYKNRVRSRIANLKDTKNPNLRKNVLCGNISAEQIARMTAEEMASDELREIRKALTNEAIREHQMARTSGSETDLFVCGKCKKNNCTYTQVQTRSADEPMTTFVFCNECGNRWKFC
SIO_010081: LOC116986148
subclass of: SO_0000673
so part of: LOC116986148
location: join(2967563..2967631,2969913..2969975,2971546..2971651,2979332..2979419,2981742..2981872,2983616..2983672,2985776..2985930,2987343..2987489,2987914..2987985,2990912..2990920)
location: region:2967563-2990920:1
so has part: feature:2967563-2967631:1:exon
so has part: feature:2969913-2969975:1:exon
so has part: feature:2971546-2971651:1:exon
so has part: feature:2979332-2979419:1:exon
so has part: feature:2981742-2981872:1:exon
so has part: feature:2983616-2983672:1:exon
so has part: feature:2985776-2985930:1:exon
so has part: feature:2987343-2987489:1:exon
so has part: feature:2987914-2987985:1:exon
so has part: feature:2990912-2990920:1:exon

XP_032897237.1
type: Protein
SIO_000068: ncbiprotein

position:2967563:1
position: 2967563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2990920:1
position: 2990920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2967563-2967631:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2969913-2969975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2971546-2971651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2979332-2979419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2981742-2981872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2983616-2983672:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2985776-2985930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2987343-2987489:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2987914-2987985:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2990912-2990920:1:exon

LOC116986148
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986148
product: transcription elongation factor A protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033041347.1
SIO_010081: LOC116986148
subclass of: SO_0000673
so part of: LOC116986148
location: join(2967659..2968142,2969913..2969975,2971546..2971651,2979332..2979419,2981742..2981872,2983616..2983672,2985776..2985930,2987343..2987489,2987914..2987985,2990912..2991896)
location: region:2967659-2991896:1
so has part: feature:2967659-2968142:1:exon
so has part: feature:2969913-2969975:1:exon
so has part: feature:2971546-2971651:1:exon
so has part: feature:2979332-2979419:1:exon
so has part: feature:2981742-2981872:1:exon
so has part: feature:2983616-2983672:1:exon
so has part: feature:2985776-2985930:1:exon
so has part: feature:2987343-2987489:1:exon
so has part: feature:2987914-2987985:1:exon
so has part: feature:2990912-2991896:1:exon

position:2967659:1
position: 2967659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2967659-2968142:1:exon

position:2968142:1
position: 2968142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2969913-2969975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2971546-2971651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2979332-2979419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2981742-2981872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2983616-2983672:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2985776-2985930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2987343-2987489:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2987914-2987985:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2990912-2991896:1:exon

LOC116986148
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor A protein 1-like isoform X2
translation: MTLDLLQSTRVGMSVNAVRKQSTDEEVTTLAKSLIKSWKKLLDGPAGDKEAEDKKKECSTSSKNSSDSTEQSSSKRPEQRTPITPKMTSFPPIPVTSDTVRNKCRELLSAALQTDNDYVAIGTDCEHMAAQIEEIVFQEMSNTDMKYKNRVRSRIANLKDTKNPNLRKNVLCGNISAEQIARMTAEEMASDELREIRKALTNEAIREHQMARTSGSETDLFVCGKCKKNNCTYTQVQTRSADEPMTTFVFCNECGNRWKFC
SIO_010081: LOC116986148
subclass of: SO_0000673
so part of: LOC116986148
location: join(2969955..2969975,2971546..2971651,2979332..2979419,2981742..2981872,2983616..2983672,2985776..2985930,2987343..2987489,2987914..2987985,2990912..2990920)
location: region:2969955-2990920:1
so has part: feature:2969955-2969975:1:exon
so has part: feature:2971546-2971651:1:exon
so has part: feature:2979332-2979419:1:exon
so has part: feature:2981742-2981872:1:exon
so has part: feature:2983616-2983672:1:exon
so has part: feature:2985776-2985930:1:exon
so has part: feature:2987343-2987489:1:exon
so has part: feature:2987914-2987985:1:exon
so has part: feature:2990912-2990920:1:exon

XP_032897238.1
type: Protein
SIO_000068: ncbiprotein

position:2969955:1
position: 2969955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2969955-2969975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2971546-2971651:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2979332-2979419:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2981742-2981872:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2983616-2983672:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2985776-2985930:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2987343-2987489:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2987914-2987985:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2990912-2990920:1:exon

LOC116986055
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2997854..3002429)
location: region:2997854-3002429:-1
so has part: feature:2997854-3002429:-1:exon
subclass of: SO_0000010

116986055
type: Gene
SIO_000068: ncbigene

position:2997854:-1
position: 2997854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3002429:-1
position: 3002429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2997854-3002429:-1:exon

LOC116986055
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986055
product: regulator of G-protein signaling 17-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033041234.1
SIO_010081: LOC116986055
subclass of: SO_0000673
so part of: LOC116986055
location: complement(join(2997854..2999181,3002184..3002429))
location: region:2997854-3002429:-1
so has part: feature:3002184-3002429:-1:exon
so has part: feature:2997854-2999181:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3002184-3002429:-1:exon

position:3002184:-1
position: 3002184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2997854-2999181:-1:exon

position:2999181:-1
position: 2999181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116986055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 17-like
translation: MPRSAKPTADEIHLWAQSFDKLLKTPAGRNSFREFLRTEYSEENMLFWLACEDFKTEANISAIEDKARTIYEDFISILSPKEVSLDSRVREVINKKMEEPSNQVFDDAQLQIYTLMHRDSYPRFLNSSIYNSLLQMSTSTASES
SIO_010081: LOC116986055
subclass of: SO_0000673
so part of: LOC116986055
location: complement(join(2998993..2999181,3002184..3002429))
location: region:2998993-3002429:-1
so has part: feature:3002184-3002429:-1:exon
so has part: feature:2998993-2999181:-1:exon

XP_032897125.1
type: Protein
SIO_000068: ncbiprotein

position:2998993:-1
position: 2998993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3002184-3002429:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2998993-2999181:-1:exon

LOC116986056
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3002721..3023553)
location: region:3002721-3023553:-1
so has part: feature:3002721-3023553:-1:exon
subclass of: SO_0000010

116986056
type: Gene
SIO_000068: ncbigene

position:3002721:-1
position: 3002721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3023553:-1
position: 3023553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3002721-3023553:-1:exon

LOC116986056
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986056
product: regulator of G-protein signaling 20-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033041236.1
SIO_010081: LOC116986056
subclass of: SO_0000673
so part of: LOC116986056
location: complement(join(3002721..3002738,3004614..3004770,3006191..3006265,3023179..3023310,3023396..3023553))
location: region:3002721-3023553:-1
so has part: feature:3023396-3023553:-1:exon
so has part: feature:3023179-3023310:-1:exon
so has part: feature:3006191-3006265:-1:exon
so has part: feature:3004614-3004770:-1:exon
so has part: feature:3002721-3002738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3023396-3023553:-1:exon

position:3023396:-1
position: 3023396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3023179-3023310:-1:exon

position:3023179:-1
position: 3023179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3023310:-1
position: 3023310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3006191-3006265:-1:exon

position:3006191:-1
position: 3006191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3006265:-1
position: 3006265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3004614-3004770:-1:exon

position:3004614:-1
position: 3004614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3004770:-1
position: 3004770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3002721-3002738:-1:exon

position:3002738:-1
position: 3002738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116986056
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 20-like
translation: MSYDATGNCAESTAGCRWCVTCALVQKLLENVPCLEVHFCVQSQSFCFVPRTSGRGLSVRRGRQMSQNGNFTTTQAGGGHRSNACCLCWCCCCSNSWREDEDRNRRISHNITMETLENCDLNAKPTAEEIHLWAQSFDKLLKTPAGRNSFREFLRTEYSEENMLFWLACEDFKTCWRKG
SIO_010081: LOC116986056
subclass of: SO_0000673
so part of: LOC116986056
location: complement(join(3002721..3002738,3004614..3004770,3006191..3006265,3023179..3023310,3023396..3023553))
location: region:3002721-3023553:-1
so has part: feature:3023396-3023553:-1:exon
so has part: feature:3023179-3023310:-1:exon
so has part: feature:3006191-3006265:-1:exon
so has part: feature:3004614-3004770:-1:exon
so has part: feature:3002721-3002738:-1:exon

XP_032897127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3023396-3023553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3023179-3023310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006191-3006265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3004614-3004770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3002721-3002738:-1:exon

lkaaear1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: lkaaear1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3062397..3070599)
location: region:3062397-3070599:-1
so has part: feature:3062397-3070599:-1:exon
subclass of: SO_0000010

116986080
type: Gene
SIO_000068: ncbigene

position:3062397:-1
position: 3062397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3070599:-1
position: 3070599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3062397-3070599:-1:exon

lkaaear1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: lkaaear1
product: LKAAEAR motif containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033041260.1
SIO_010081: lkaaear1
subclass of: SO_0000673
so part of: lkaaear1
location: complement(join(3062397..3062584,3065059..3065181,3067477..3067790,3070551..3070599))
location: region:3062397-3070599:-1
so has part: feature:3070551-3070599:-1:exon
so has part: feature:3067477-3067790:-1:exon
so has part: feature:3065059-3065181:-1:exon
so has part: feature:3062397-3062584:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3070551-3070599:-1:exon

position:3070551:-1
position: 3070551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3067477-3067790:-1:exon

position:3067477:-1
position: 3067477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3067790:-1
position: 3067790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3065059-3065181:-1:exon

position:3065059:-1
position: 3065059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3065181:-1
position: 3065181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3062397-3062584:-1:exon

position:3062584:-1
position: 3062584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lkaaear1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: lkaaear1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LKAAEAR1
translation: MSKKDDRVEDLAPKTEPKPIASEGKSASKLQKANDGSRSQIPPRRIGFILSRPDVPLNCQEELEKKKQLILVGQLRAAESHNKIQNMRQRYRAMRADEINLLISSQSTARKAIRLEALLPPFQEEIHLKDTLNKLERKRVEEIMSDEAGVTINRTL
SIO_010081: lkaaear1
subclass of: SO_0000673
so part of: lkaaear1
location: complement(join(3062522..3062584,3065059..3065181,3067477..3067761))
location: region:3062522-3067761:-1
so has part: feature:3067477-3067761:-1:exon
so has part: feature:3065059-3065181:-1:exon
so has part: feature:3062522-3062584:-1:exon

XP_032897151.1
type: Protein
SIO_000068: ncbiprotein

position:3062522:-1
position: 3062522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3067761:-1
position: 3067761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3067477-3067761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3065059-3065181:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3062522-3062584:-1:exon

oprl1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: oprl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3188567..3205168
location: region:3188567-3205168:1
so has part: feature:3188567-3205168:1:exon
subclass of: SO_0000010

116986149
type: Gene
SIO_000068: ncbigene

position:3188567:1
position: 3188567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3205168:1
position: 3205168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3188567-3205168:1:exon

oprl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: oprl1
product: opioid related nociceptin receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 85 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033041348.1
SIO_010081: oprl1
subclass of: SO_0000673
so part of: oprl1
location: join(3188567..3188831,3188965..3189202,3203582..3203937,3204363..3205168)
location: region:3188567-3205168:1
so has part: feature:3188567-3188831:1:exon
so has part: feature:3188965-3189202:1:exon
so has part: feature:3203582-3203937:1:exon
so has part: feature:3204363-3205168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3188567-3188831:1:exon

position:3188831:1
position: 3188831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3188965-3189202:1:exon

position:3188965:1
position: 3188965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3189202:1
position: 3189202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3203582-3203937:1:exon

position:3203582:1
position: 3203582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3203937:1
position: 3203937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3204363-3205168:1:exon

position:3204363:1
position: 3204363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

oprl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: oprl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nociceptin receptor
translation: MDFDTVCGWGNLHHLKYFNDSFDENDTLLLDHWSDNGTDFMVDWSDATKIATTVIYLFICIVGLVGNCLVMFVIVRYTKMKTATNIYIFNLAVADALELITLPFQATDALLGFWPFGNVLCKLAISIDYYNMFTSILTLTVMSVDRYIAVCHPVKALDMRTPYNAKVVNVCIWVLASVIGIPAMVMGSAEMENKQIECLLVHPQPHAYWKPTIEIAVFLFSFVIPVCVITVCYTLMLRRLRRVRVLSGSKEKDRNLRRITRMVMVVVAVFVVCWTPVHVLVLVQVVCNREILTIMPSWHFCVALGYANSSLNPVLYAFLDENFKRCFKEFCFPSNLKSEFKTSNGMRSITRGIALSCKNTDGVENPA
SIO_010081: oprl1
subclass of: SO_0000673
so part of: oprl1
location: join(3188976..3189202,3203582..3203937,3204363..3204883)
location: region:3188976-3204883:1
so has part: feature:3188976-3189202:1:exon
so has part: feature:3203582-3203937:1:exon
so has part: feature:3204363-3204883:1:exon

XP_032897239.1
type: Protein
SIO_000068: ncbiprotein

position:3188976:1
position: 3188976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3204883:1
position: 3204883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3188976-3189202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3203582-3203937:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3204363-3204883:1:exon

npbwr2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: npbwr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3243026..3245975)
location: region:3243026-3245975:-1
so has part: feature:3243026-3245975:-1:exon
subclass of: SO_0000010

116986150
type: Gene
SIO_000068: ncbigene

position:3243026:-1
position: 3243026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3245975:-1
position: 3245975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3243026-3245975:-1:exon

npbwr2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: npbwr2
product: neuropeptides B and W receptor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033041350.1
SIO_010081: npbwr2
subclass of: SO_0000673
so part of: npbwr2
location: complement(join(3243026..3244099,3245096..3245311,3245825..3245975))
location: region:3243026-3245975:-1
so has part: feature:3245825-3245975:-1:exon
so has part: feature:3245096-3245311:-1:exon
so has part: feature:3243026-3244099:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3245825-3245975:-1:exon

position:3245825:-1
position: 3245825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3245096-3245311:-1:exon

position:3245096:-1
position: 3245096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3245311:-1
position: 3245311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3243026-3244099:-1:exon

position:3244099:-1
position: 3244099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

npbwr2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: npbwr2
product: neuropeptides B and W receptor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033041349.1
SIO_010081: npbwr2
subclass of: SO_0000673
so part of: npbwr2
location: complement(join(3243026..3244099,3245096..3245311,3245801..3245975))
location: region:3243026-3245975:-1
so has part: feature:3245801-3245975:-1:exon
so has part: feature:3245096-3245311:-1:exon
so has part: feature:3243026-3244099:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3245801-3245975:-1:exon

position:3245801:-1
position: 3245801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3245096-3245311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3243026-3244099:-1:exon

npbwr2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: npbwr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropeptides B/W receptor type 2
translation: MESDAGAELLNRSCSGPHATCEVSNATDSNSMYERYPDFYIVLPVIYSVICAAGLTGNTAVIYVILKAPKMMTVTNVFILNLAIADDLFTLVLPINIADHLLRHWPFGEVMCKLIISIDHYNIFSSIYFLTVMSIDRYLVVLATVRSEKLPRRTYRAAKVVSLCVWVLVTLIVLPFTVFAQVYTDPMNRRSCVLGFPKPERAWLKASRIYTLILAFAIPVTTICILYTMMVYRLRGMQLNSNAKALDKAKKRVTLMVFILLAVCLFCWTPFHLTTVVALTTDVQETPLVIGIAYFITSLSYANSCLNPFLYAFLDDSFQKSFKKLLECRAA
SIO_010081: npbwr2
subclass of: SO_0000673
so part of: npbwr2
location: complement(3243070..3244065)
location: region:3243070-3244065:-1
so has part: feature:3243070-3244065:-1:exon

XP_032897240.1
type: Protein
SIO_000068: ncbiprotein

position:3243070:-1
position: 3243070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3244065:-1
position: 3244065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3243070-3244065:-1:exon

npbwr2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: npbwr2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropeptides B/W receptor type 2
translation: MESDAGAELLNRSCSGPHATCEVSNATDSNSMYERYPDFYIVLPVIYSVICAAGLTGNTAVIYVILKAPKMMTVTNVFILNLAIADDLFTLVLPINIADHLLRHWPFGEVMCKLIISIDHYNIFSSIYFLTVMSIDRYLVVLATVRSEKLPRRTYRAAKVVSLCVWVLVTLIVLPFTVFAQVYTDPMNRRSCVLGFPKPERAWLKASRIYTLILAFAIPVTTICILYTMMVYRLRGMQLNSNAKALDKAKKRVTLMVFILLAVCLFCWTPFHLTTVVALTTDVQETPLVIGIAYFITSLSYANSCLNPFLYAFLDDSFQKSFKKLLECRAA
SIO_010081: npbwr2
subclass of: SO_0000673
so part of: npbwr2
location: complement(3243070..3244065)
location: region:3243070-3244065:-1
so has part: feature:3243070-3244065:-1:exon

XP_032897241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3243070-3244065:-1:exon

trnae-cuc
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trnae-cuc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3255690..3255761)
location: region:3255690-3255761:-1
so has part: feature:3255690-3255761:-1:exon
subclass of: SO_0000663

116986551
type: Gene
SIO_000068: ncbigene

position:3255690:-1
position: 3255690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3255761:-1
position: 3255761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3255690-3255761:-1:exon

trnae-cuc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 386614
gene: trnae-cuc
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3255726..3255728),aa:Glu, seq:ctc)
SIO_010081: trnae-cuc
subclass of: SO_0000673
so part of: trnae-cuc
location: complement(3255690..3255761)
location: region:3255690-3255761:-1
so has part: feature:3255690-3255761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3255690-3255761:-1:exon

LOC116986151
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3387988..3417444
location: region:3387988-3417444:1
so has part: feature:3387988-3417444:1:exon
subclass of: SO_0000010

116986151
type: Gene
SIO_000068: ncbigene

position:3387988:1
position: 3387988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3417444:1
position: 3417444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3387988-3417444:1:exon

LOC116986151
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986151
product: myelin transcription factor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033041352.1
SIO_010081: LOC116986151
subclass of: SO_0000673
so part of: LOC116986151
location: join(3387988..3388191,3407245..3407466,3409208..3409299,3412064..3412167,3413379..3413522,3415967..3417444)
location: region:3387988-3417444:1
so has part: feature:3387988-3388191:1:exon
so has part: feature:3407245-3407466:1:exon
so has part: feature:3409208-3409299:1:exon
so has part: feature:3412064-3412167:1:exon
so has part: feature:3413379-3413522:1:exon
so has part: feature:3415967-3417444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3387988-3388191:1:exon

position:3388191:1
position: 3388191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3407245-3407466:1:exon

position:3407245:1
position: 3407245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3407466:1
position: 3407466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3409208-3409299:1:exon

position:3409208:1
position: 3409208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3409299:1
position: 3409299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3412064-3412167:1:exon

position:3412064:1
position: 3412064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3412167:1
position: 3412167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3413379-3413522:1:exon

position:3413379:1
position: 3413379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3413522:1
position: 3413522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3415967-3417444:1:exon

position:3415967:1
position: 3415967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116986151
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin transcription factor 1-like
translation: MEQRQSIPFMSSQYYSGCFHSLSGCPRAKKSGQKFTPTKDDKEDPEMKCPVPGCDGLGHVSGKYASHRSASGCPLAARRQKEGFHNGSPFTWKPVKGDGPACPTPGCDGSGHANGSFLTHRSLSGCPRATLAMKKAKFSGEDLLTTKFRASDAIENDEEIKQLDKEISELNESNTEMESNMVKLQSQISSMEKNLKTIEDENKVIEEQNEALFKELAGLSQALIRSLADIKLPQMEPISEQNFDAYVNTLTDMYTNMECYQNPENKALLESIKQAVKGIQV
SIO_010081: LOC116986151
subclass of: SO_0000673
so part of: LOC116986151
location: join(3388049..3388191,3407245..3407466,3409208..3409299,3412064..3412167,3413379..3413522,3415967..3416107)
location: region:3388049-3416107:1
so has part: feature:3388049-3388191:1:exon
so has part: feature:3407245-3407466:1:exon
so has part: feature:3409208-3409299:1:exon
so has part: feature:3412064-3412167:1:exon
so has part: feature:3413379-3413522:1:exon
so has part: feature:3415967-3416107:1:exon

XP_032897243.1
type: Protein
SIO_000068: ncbiprotein

position:3388049:1
position: 3388049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3416107:1
position: 3416107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3388049-3388191:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3407245-3407466:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3409208-3409299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3412064-3412167:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3413379-3413522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3415967-3416107:1:exon

pcmtd2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: pcmtd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3437466..3453691
location: region:3437466-3453691:1
so has part: feature:3437466-3453691:1:exon
subclass of: SO_0000010

116986153
type: Gene
SIO_000068: ncbigene

position:3437466:1
position: 3437466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3453691:1
position: 3453691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3437466-3453691:1:exon

pcmtd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pcmtd2
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033041354.1
SIO_010081: pcmtd2
subclass of: SO_0000673
so part of: pcmtd2
location: join(3437466..3437597,3442055..3442407,3444384..3444486,3447992..3448163,3451427..3451550,3452679..3453691)
location: region:3437466-3453691:1
so has part: feature:3437466-3437597:1:exon
so has part: feature:3442055-3442407:1:exon
so has part: feature:3444384-3444486:1:exon
so has part: feature:3447992-3448163:1:exon
so has part: feature:3451427-3451550:1:exon
so has part: feature:3452679-3453691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3437466-3437597:1:exon

position:3437597:1
position: 3437597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3442055-3442407:1:exon

position:3442055:1
position: 3442055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3442407:1
position: 3442407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3444384-3444486:1:exon

position:3444384:1
position: 3444384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3444486:1
position: 3444486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3447992-3448163:1:exon

position:3447992:1
position: 3447992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3448163:1
position: 3448163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3451427-3451550:1:exon

position:3451427:1
position: 3451427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3451550:1
position: 3451550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3452679-3453691:1:exon

position:3452679:1
position: 3452679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pcmtd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pcmtd2
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033041355.1
SIO_010081: pcmtd2
subclass of: SO_0000673
so part of: pcmtd2
location: join(3437466..3437597,3442083..3442407,3444384..3444486,3447992..3448163,3451427..3451550,3452679..3453691)
location: region:3437466-3453691:1
so has part: feature:3437466-3437597:1:exon
so has part: feature:3442083-3442407:1:exon
so has part: feature:3444384-3444486:1:exon
so has part: feature:3447992-3448163:1:exon
so has part: feature:3451427-3451550:1:exon
so has part: feature:3452679-3453691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3437466-3437597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3442083-3442407:1:exon

position:3442083:1
position: 3442083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3444384-3444486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3447992-3448163:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3451427-3451550:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3452679-3453691:1:exon

pcmtd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pcmtd2
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033041356.1
SIO_010081: pcmtd2
subclass of: SO_0000673
so part of: pcmtd2
location: join(3440859..3440937,3442083..3442407,3444384..3444486,3447992..3448163,3451427..3451550,3452679..3453691)
location: region:3440859-3453691:1
so has part: feature:3440859-3440937:1:exon
so has part: feature:3442083-3442407:1:exon
so has part: feature:3444384-3444486:1:exon
so has part: feature:3447992-3448163:1:exon
so has part: feature:3451427-3451550:1:exon
so has part: feature:3452679-3453691:1:exon

position:3440859:1
position: 3440859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3440859-3440937:1:exon

position:3440937:1
position: 3440937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3442083-3442407:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3444384-3444486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3447992-3448163:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3451427-3451550:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3452679-3453691:1:exon

pcmtd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pcmtd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 2
translation: MGGAVSAGEDNDDLIDNLKEAHYIRTEVVEQAFRAIDRADYYLEIYKDNAYKDLAWKNGNIHLSAPCIYSEVMEALDLQPGLAFLNLGSGTGYLSTMVGLILGPFGVNHGIELHVDVVEYANQKLENFIKTSDSFDKFEFCEPSFVVGNCLEIASDSRQYDRVYCGAGVQKDHEEYMRNLIKVGGILVMPLEEKLTKIMRTGLNTWETEKILAVSFAPLIQPCNADSGKVRTVQLPPVSVGSLQELTRICIRRTLKNTINQEKTSNGVPPKVPSRFKRRRIRKRRMDAIVLVDKQVFASRISNPFDNNNNNEDLEEVRREDDEKEYCDFKPEPPLHLLQEKIFSLPLPEPLKLYLLYYRDK
SIO_010081: pcmtd2
subclass of: SO_0000673
so part of: pcmtd2
location: join(3442101..3442407,3444384..3444486,3447992..3448163,3451427..3451550,3452679..3453058)
location: region:3442101-3453058:1
so has part: feature:3442101-3442407:1:exon
so has part: feature:3444384-3444486:1:exon
so has part: feature:3447992-3448163:1:exon
so has part: feature:3451427-3451550:1:exon
so has part: feature:3452679-3453058:1:exon

XP_032897245.1
type: Protein
SIO_000068: ncbiprotein

position:3442101:1
position: 3442101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3453058:1
position: 3453058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3442101-3442407:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3444384-3444486:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3447992-3448163:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3451427-3451550:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3452679-3453058:1:exon

pcmtd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pcmtd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 2
translation: MGGAVSAGEDNDDLIDNLKEAHYIRTEVVEQAFRAIDRADYYLEIYKDNAYKDLAWKNGNIHLSAPCIYSEVMEALDLQPGLAFLNLGSGTGYLSTMVGLILGPFGVNHGIELHVDVVEYANQKLENFIKTSDSFDKFEFCEPSFVVGNCLEIASDSRQYDRVYCGAGVQKDHEEYMRNLIKVGGILVMPLEEKLTKIMRTGLNTWETEKILAVSFAPLIQPCNADSGKVRTVQLPPVSVGSLQELTRICIRRTLKNTINQEKTSNGVPPKVPSRFKRRRIRKRRMDAIVLVDKQVFASRISNPFDNNNNNEDLEEVRREDDEKEYCDFKPEPPLHLLQEKIFSLPLPEPLKLYLLYYRDK
SIO_010081: pcmtd2
subclass of: SO_0000673
so part of: pcmtd2
location: join(3442101..3442407,3444384..3444486,3447992..3448163,3451427..3451550,3452679..3453058)
location: region:3442101-3453058:1
so has part: feature:3442101-3442407:1:exon
so has part: feature:3444384-3444486:1:exon
so has part: feature:3447992-3448163:1:exon
so has part: feature:3451427-3451550:1:exon
so has part: feature:3452679-3453058:1:exon

XP_032897246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3442101-3442407:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3444384-3444486:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3447992-3448163:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3451427-3451550:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3452679-3453058:1:exon

pcmtd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pcmtd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 2
translation: MGGAVSAGEDNDDLIDNLKEAHYIRTEVVEQAFRAIDRADYYLEIYKDNAYKDLAWKNGNIHLSAPCIYSEVMEALDLQPGLAFLNLGSGTGYLSTMVGLILGPFGVNHGIELHVDVVEYANQKLENFIKTSDSFDKFEFCEPSFVVGNCLEIASDSRQYDRVYCGAGVQKDHEEYMRNLIKVGGILVMPLEEKLTKIMRTGLNTWETEKILAVSFAPLIQPCNADSGKVRTVQLPPVSVGSLQELTRICIRRTLKNTINQEKTSNGVPPKVPSRFKRRRIRKRRMDAIVLVDKQVFASRISNPFDNNNNNEDLEEVRREDDEKEYCDFKPEPPLHLLQEKIFSLPLPEPLKLYLLYYRDK
SIO_010081: pcmtd2
subclass of: SO_0000673
so part of: pcmtd2
location: join(3442101..3442407,3444384..3444486,3447992..3448163,3451427..3451550,3452679..3453058)
location: region:3442101-3453058:1
so has part: feature:3442101-3442407:1:exon
so has part: feature:3444384-3444486:1:exon
so has part: feature:3447992-3448163:1:exon
so has part: feature:3451427-3451550:1:exon
so has part: feature:3452679-3453058:1:exon

XP_032897247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3442101-3442407:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3444384-3444486:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3447992-3448163:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3451427-3451550:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3452679-3453058:1:exon

LOC116986152
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3455266..3554582
location: region:3455266-3554582:1
so has part: feature:3455266-3554582:1:exon
subclass of: SO_0000010

116986152
type: Gene
SIO_000068: ncbigene

position:3455266:1
position: 3455266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3554582:1
position: 3554582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3455266-3554582:1:exon

LOC116986152
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986152
product: peroxidasin homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033041353.1
SIO_010081: LOC116986152
subclass of: SO_0000673
so part of: LOC116986152
location: join(3455266..3455516,3486930..3487001,3499045..3499116,3501081..3501152,3501923..3501994,3503704..3503775,3510303..3510472,3511734..3511851,3513636..3513805,3516717..3516989,3521408..3521524,3525614..3525772,3527954..3528066,3530352..3530508,3535196..3535304,3537102..3537259,3538291..3538411,3539250..3539920,3540134..3540854,3543295..3543429,3545349..3545557,3549023..3549146,3551615..3551702,3553237..3553350,3554185..3554582)
location: region:3455266-3554582:1
so has part: feature:3455266-3455516:1:exon
so has part: feature:3486930-3487001:1:exon
so has part: feature:3499045-3499116:1:exon
so has part: feature:3501081-3501152:1:exon
so has part: feature:3501923-3501994:1:exon
so has part: feature:3503704-3503775:1:exon
so has part: feature:3510303-3510472:1:exon
so has part: feature:3511734-3511851:1:exon
so has part: feature:3513636-3513805:1:exon
so has part: feature:3516717-3516989:1:exon
so has part: feature:3521408-3521524:1:exon
so has part: feature:3525614-3525772:1:exon
so has part: feature:3527954-3528066:1:exon
so has part: feature:3530352-3530508:1:exon
so has part: feature:3535196-3535304:1:exon
so has part: feature:3537102-3537259:1:exon
so has part: feature:3538291-3538411:1:exon
so has part: feature:3539250-3539920:1:exon
so has part: feature:3540134-3540854:1:exon
so has part: feature:3543295-3543429:1:exon
so has part: feature:3545349-3545557:1:exon
so has part: feature:3549023-3549146:1:exon
so has part: feature:3551615-3551702:1:exon
so has part: feature:3553237-3553350:1:exon
so has part: feature:3554185-3554582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3455266-3455516:1:exon

position:3455516:1
position: 3455516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3486930-3487001:1:exon

position:3486930:1
position: 3486930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3487001:1
position: 3487001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3499045-3499116:1:exon

position:3499045:1
position: 3499045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3499116:1
position: 3499116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3501081-3501152:1:exon

position:3501081:1
position: 3501081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3501152:1
position: 3501152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3501923-3501994:1:exon

position:3501923:1
position: 3501923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3501994:1
position: 3501994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3503704-3503775:1:exon

position:3503704:1
position: 3503704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3503775:1
position: 3503775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3510303-3510472:1:exon

position:3510303:1
position: 3510303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3510472:1
position: 3510472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3511734-3511851:1:exon

position:3511734:1
position: 3511734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3511851:1
position: 3511851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3513636-3513805:1:exon

position:3513636:1
position: 3513636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3513805:1
position: 3513805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3516717-3516989:1:exon

position:3516717:1
position: 3516717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3516989:1
position: 3516989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3521408-3521524:1:exon

position:3521408:1
position: 3521408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3521524:1
position: 3521524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3525614-3525772:1:exon

position:3525614:1
position: 3525614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3525772:1
position: 3525772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3527954-3528066:1:exon

position:3527954:1
position: 3527954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3528066:1
position: 3528066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3530352-3530508:1:exon

position:3530352:1
position: 3530352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3530508:1
position: 3530508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3535196-3535304:1:exon

position:3535196:1
position: 3535196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3535304:1
position: 3535304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3537102-3537259:1:exon

position:3537102:1
position: 3537102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3537259:1
position: 3537259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3538291-3538411:1:exon

position:3538291:1
position: 3538291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3538411:1
position: 3538411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3539250-3539920:1:exon

position:3539250:1
position: 3539250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3539920:1
position: 3539920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3540134-3540854:1:exon

position:3540134:1
position: 3540134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3540854:1
position: 3540854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3543295-3543429:1:exon

position:3543295:1
position: 3543295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3543429:1
position: 3543429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3545349-3545557:1:exon

position:3545349:1
position: 3545349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3545557:1
position: 3545557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3549023-3549146:1:exon

position:3549023:1
position: 3549023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3549146:1
position: 3549146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3551615-3551702:1:exon

position:3551615:1
position: 3551615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3551702:1
position: 3551702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3553237-3553350:1:exon

position:3553237:1
position: 3553237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3553350:1
position: 3553350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3554185-3554582:1:exon

position:3554185:1
position: 3554185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116986152
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxidasin homolog
translation: MLATCLVFLMGSLLFLSPLSSPCPSRCLCFRTTVRCMHLMLENVPEISAQTTILDLRFNRIKEIRPAAFKRLRNLNTLLLNNNQIKGIPRRAFEELENLKYLYLYKNEIQTIQKQAFKGLVSLEQLYLHFNNIEVLESETFSDLPKLERLFLHNNRLSRIHPGTFNQLESLKRLRLDSNSLICDCELVWLAELLKKYAEVGNTQTAATCEHPSHLQGRSVTTVTAQEFNCERPRITSEPQDVDVTLGNTVYFTCRAEGNPKPNIIWLHNNNEIDMKVDHRVNLLEDGTLMIQDIKESDQGAYQCMAKNVAGEVKTNEVILRYFDTPSKPTFVIQPQNTEVLVGESVTLECGVSGHPQPHIAWTKGNNTAIPDDLRHTTTASGGLFMQNVTFDDQGQYNCNASNKEGSIQAVAHIIIQDGPKFSMLPKNQVAVEGTTVDFDCRAEGTPSPVIAWTKAGGQLPSDRRHTVLSTGTLRIVRVAAHDQGQYECHAISVVGARHVPAQLTVESLVTPVFVHAPYDTAAETGQDVEIHCSAQGEPHPIITWTKDGVQITDSGKFFVTPEGTLTIRDVGEGDQGRYECIARNPFGFISSNMMLTVTALEGRRTGDTFVEESLQEAINSIDSAINSTRRDLFSKNPRTPNDLLALFRYPRDPYTVEAARAGEIFERTLQLIQEHVQQGLTVNLNNTSYRYNDLVSPRYLNMIANISGCKTHRRSPACDNICFHNKYRTHDGTCNNLQHPMWGASLIAFQRLLKPVYENGFNLPRGSVLSGENIRRPLPLPLPRLVSTTMVGTESTTPDGQYTHLLMQWGQFVDHDLDLTVGALSMSRFSDGQPCHRSCTDDPPCFPIHVPADDPRVRSGRCMFFVRSSPVCGSGMTSLLMDSVYPREQINRLTSYVDASNVYGSTEAESRELRDLGGSRGLLKSGQEVPGSGQKRLLPFAAGPPTECMRDTNQSAIPCFLAGDHRSNEHVALTALHTLWFREHNRIAGQLLALNPHWDGDTIYHEARTIVAAQMQHITYQHWLAKILGDVGMNVLGDYRGYNPNVNAGIVNAFATAAFRFGHTLVNPILYRLNETFQAIPQGHLPLHKAFFSPFRLIQEGGIDPLLRGLFGVAGKMRVPTELLTLELTEKLFSMVHAVSLDLAAMNIQRGRDHGIPPYNDYRVFCNLTSAHDFQDLKNEIKNPEIRKKLERLYGTPRNIDLWPALMVEDLIPGTRVGPTLLCLLTTQFRRLRDGDRFWYENPGVFSPAQVTQLKQASLARVICDNGDHIQQVQPDVFKVAHYPQGFLNCGEIPGIDLRMWQDCCEDCANRGQFNTLSQRFHAKRSEEYSFPEATDAHQKQEPRLRERGGELQEKISNSSSIRADNCGTELENLRRKVEMLEARLKVTGCVDKDGKVRGEGEHWERDPCTECHCQDAETTCVMMSCPQNCRNPVTRQGKCCPDCEGE
SIO_010081: LOC116986152
subclass of: SO_0000673
so part of: LOC116986152
location: join(3455356..3455516,3486930..3487001,3499045..3499116,3501081..3501152,3501923..3501994,3503704..3503775,3510303..3510472,3511734..3511851,3513636..3513805,3516717..3516989,3521408..3521524,3525614..3525772,3527954..3528066,3530352..3530508,3535196..3535304,3537102..3537259,3538291..3538411,3539250..3539920,3540134..3540854,3543295..3543429,3545349..3545557,3549023..3549146,3551615..3551702,3553237..3553350,3554185..3554283)
location: region:3455356-3554283:1
so has part: feature:3455356-3455516:1:exon
so has part: feature:3486930-3487001:1:exon
so has part: feature:3499045-3499116:1:exon
so has part: feature:3501081-3501152:1:exon
so has part: feature:3501923-3501994:1:exon
so has part: feature:3503704-3503775:1:exon
so has part: feature:3510303-3510472:1:exon
so has part: feature:3511734-3511851:1:exon
so has part: feature:3513636-3513805:1:exon
so has part: feature:3516717-3516989:1:exon
so has part: feature:3521408-3521524:1:exon
so has part: feature:3525614-3525772:1:exon
so has part: feature:3527954-3528066:1:exon
so has part: feature:3530352-3530508:1:exon
so has part: feature:3535196-3535304:1:exon
so has part: feature:3537102-3537259:1:exon
so has part: feature:3538291-3538411:1:exon
so has part: feature:3539250-3539920:1:exon
so has part: feature:3540134-3540854:1:exon
so has part: feature:3543295-3543429:1:exon
so has part: feature:3545349-3545557:1:exon
so has part: feature:3549023-3549146:1:exon
so has part: feature:3551615-3551702:1:exon
so has part: feature:3553237-3553350:1:exon
so has part: feature:3554185-3554283:1:exon

XP_032897244.1
type: Protein
SIO_000068: ncbiprotein

position:3455356:1
position: 3455356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3554283:1
position: 3554283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3455356-3455516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3486930-3487001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3499045-3499116:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3501081-3501152:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3501923-3501994:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3503704-3503775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3510303-3510472:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3511734-3511851:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3513636-3513805:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3516717-3516989:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3521408-3521524:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3525614-3525772:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3527954-3528066:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3530352-3530508:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3535196-3535304:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3537102-3537259:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3538291-3538411:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3539250-3539920:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3540134-3540854:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3543295-3543429:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3545349-3545557:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3549023-3549146:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3551615-3551702:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3553237-3553350:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3554185-3554283:1:exon

srms
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: srms
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3568197..3595583
location: region:3568197-3595583:1
so has part: feature:3568197-3595583:1:exon
subclass of: SO_0000010

116986154
type: Gene
SIO_000068: ncbigene

position:3568197:1
position: 3568197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3595583:1
position: 3595583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3568197-3595583:1:exon

srms
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: srms
product: src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033041357.1
SIO_010081: srms
subclass of: SO_0000673
so part of: srms
location: join(3568197..3568907,3581471..3581592,3582491..3582651,3584951..3585095,3587583..3587741,3589394..3589575,3593931..3594087,3595197..3595583)
location: region:3568197-3595583:1
so has part: feature:3568197-3568907:1:exon
so has part: feature:3581471-3581592:1:exon
so has part: feature:3582491-3582651:1:exon
so has part: feature:3584951-3585095:1:exon
so has part: feature:3587583-3587741:1:exon
so has part: feature:3589394-3589575:1:exon
so has part: feature:3593931-3594087:1:exon
so has part: feature:3595197-3595583:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3568197-3568907:1:exon

position:3568907:1
position: 3568907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3581471-3581592:1:exon

position:3581471:1
position: 3581471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3581592:1
position: 3581592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3582491-3582651:1:exon

position:3582491:1
position: 3582491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3582651:1
position: 3582651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3584951-3585095:1:exon

position:3584951:1
position: 3584951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3585095:1
position: 3585095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3587583-3587741:1:exon

position:3587583:1
position: 3587583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3587741:1
position: 3587741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3589394-3589575:1:exon

position:3589394:1
position: 3589394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3589575:1
position: 3589575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3593931-3594087:1:exon

position:3593931:1
position: 3593931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3594087:1
position: 3594087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3595197-3595583:1:exon

position:3595197:1
position: 3595197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

srms
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: srms
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Srms
translation: MEQPTRKYCPCLQVLWDRIWPQPLPSNTRQDRPRIAVISAPYLQSKATPSPAPTRPIRPGAGAGAGPVYAALYNFQARNTEEMSLTKGDKVRVIRDEGDYFFAQKGPGDRGLVPFNYVTLLQEGVEREAWYFGEIGRAEAEKLLTSAENQNGVFLVRMSETDNGRYSISALNDKVHHYRISSSSQGSFYLQENQSFSTIKDLVEFHKKNWKIFGFPLTKPCAKQAAYQVDEWERPREEFTLLRKLGEGNFGEVWEGAWGEDQRVAIKMLKKDDMNVDVFLQEVKVMKSINHPKLVQLYAVCSIVEPVYIITELMTKGNLKDYLHGEEGEVLTTTHHVYIASQVAEAMAYLEKHKFVHRDLAARNVLVGEELVCKVADFGLMRLIRDDVYNIRAGTKIPVKWTAPEAANYRRFSVKSDVWSFGVLLHEIVTYGNDPYERMTNQEVVEKISQGYRMPCPETCTADMYGIMVRCWNATEEHRPTFSVLMDELNSLYTQYYYQSQEQSPNRD
SIO_010081: srms
subclass of: SO_0000673
so part of: srms
location: join(3568522..3568907,3581471..3581592,3582491..3582651,3584951..3585095,3587583..3587741,3589394..3589575,3593931..3594087,3595197..3595411)
location: region:3568522-3595411:1
so has part: feature:3568522-3568907:1:exon
so has part: feature:3581471-3581592:1:exon
so has part: feature:3582491-3582651:1:exon
so has part: feature:3584951-3585095:1:exon
so has part: feature:3587583-3587741:1:exon
so has part: feature:3589394-3589575:1:exon
so has part: feature:3593931-3594087:1:exon
so has part: feature:3595197-3595411:1:exon

XP_032897248.1
type: Protein
SIO_000068: ncbiprotein

position:3568522:1
position: 3568522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3595411:1
position: 3595411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3568522-3568907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3581471-3581592:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3582491-3582651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3584951-3585095:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3587583-3587741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3589394-3589575:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3593931-3594087:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3595197-3595411:1:exon

LOC116986057
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986057
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3598783..3621963
location: region:3598783-3621963:1
so has part: feature:3598783-3621963:1:exon
subclass of: SO_0000010

116986057
type: Gene
SIO_000068: ncbigene

position:3598783:1
position: 3598783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3621963:1
position: 3621963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3598783-3621963:1:exon

LOC116986057
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986057
product: tyrosine-protein kinase SRK3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033041237.1
SIO_010081: LOC116986057
subclass of: SO_0000673
so part of: LOC116986057
location: join(3598783..3599243,3602243..3602361,3608284..3608546,3611588..3611756,3613859..3614017,3615645..3615826,3620657..3620810,3621779..3621963)
location: region:3598783-3621963:1
so has part: feature:3598783-3599243:1:exon
so has part: feature:3602243-3602361:1:exon
so has part: feature:3608284-3608546:1:exon
so has part: feature:3611588-3611756:1:exon
so has part: feature:3613859-3614017:1:exon
so has part: feature:3615645-3615826:1:exon
so has part: feature:3620657-3620810:1:exon
so has part: feature:3621779-3621963:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3598783-3599243:1:exon

position:3599243:1
position: 3599243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3602243-3602361:1:exon

position:3602243:1
position: 3602243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3602361:1
position: 3602361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3608284-3608546:1:exon

position:3608284:1
position: 3608284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3608546:1
position: 3608546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3611588-3611756:1:exon

position:3611588:1
position: 3611588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3611756:1
position: 3611756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3613859-3614017:1:exon

position:3613859:1
position: 3613859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3614017:1
position: 3614017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3615645-3615826:1:exon

position:3615645:1
position: 3615645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3615826:1
position: 3615826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3620657-3620810:1:exon

position:3620657:1
position: 3620657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3620810:1
position: 3620810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3621779-3621963:1:exon

position:3621779:1
position: 3621779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116986057
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986057
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase SRK3-like
translation: MKEGRKEGKLEMLQEPTVWFQEVAVKLHRPRESLPKPRSIFLMANPFRSLCTCLNASPRSSRDGEKDSRRPSTTLGGGERRRSALFTAIHDFGARSSDELSFQTGDQFEILNGDADSDRSWWFARKRSCNDGGKCKGYIPSNYIASNESVVTEPWFAGKLCRSKAKDLLCTQTVNGAFIIRESDNEENAYALSGKTNLFTVLDELRKKKKYPARILAMCLHLFISSVLDGTTVRHYRIVQNDAGQYYLNVVTQFSSLKELVEYYKMNCLRPGLQLSIPCQQQHRPNIRDLSHLTVDDWERPRSEFTLTEKLGSGHFGEVYAGYWNNTVKVAIKTVEVDLMKEKDFQMETQIMKRLQHPHLISLYATCTTSDPFYIVTELMQYGSLLNYLRSNEGSCLNLECLLDMTVQVAEGMEYLESQNYIHRDLAARNILVGENHSCKIADFGLARIIQDGAYVSQSTTIPYKWTAPEAIEFGYFSVKSDVWSFGILLYEVITYGKTPYPGMDNQEMVRVVSHGYRMPCPDGCPNTLHQVMLSCWECTAALRPSFATLVKTLSAFNTMHLY
SIO_010081: LOC116986057
subclass of: SO_0000673
so part of: LOC116986057
location: join(3598783..3599243,3602243..3602361,3608284..3608546,3611588..3611756,3613859..3614017,3615645..3615826,3620657..3620810,3621779..3621963)
location: region:3598783-3621963:1
so has part: feature:3598783-3599243:1:exon
so has part: feature:3602243-3602361:1:exon
so has part: feature:3608284-3608546:1:exon
so has part: feature:3611588-3611756:1:exon
so has part: feature:3613859-3614017:1:exon
so has part: feature:3615645-3615826:1:exon
so has part: feature:3620657-3620810:1:exon
so has part: feature:3621779-3621963:1:exon

XP_032897128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3598783-3599243:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3602243-3602361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3608284-3608546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3611588-3611756:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3613859-3614017:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3615645-3615826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3620657-3620810:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3621779-3621963:1:exon

ppdpf
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ppdpf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3636144..3644317)
location: region:3636144-3644317:-1
so has part: feature:3636144-3644317:-1:exon
subclass of: SO_0000010

116986155
type: Gene
SIO_000068: ncbigene

position:3636144:-1
position: 3636144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3644317:-1
position: 3644317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3636144-3644317:-1:exon

ppdpf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ppdpf
product: pancreatic progenitor cell differentiation and proliferation factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_033041358.1
SIO_010081: ppdpf
subclass of: SO_0000673
so part of: ppdpf
location: complement(join(3636144..3636389,3637186..3637285,3637677..3637754,3640043..3640130,3644076..3644317))
location: region:3636144-3644317:-1
so has part: feature:3644076-3644317:-1:exon
so has part: feature:3640043-3640130:-1:exon
so has part: feature:3637677-3637754:-1:exon
so has part: feature:3637186-3637285:-1:exon
so has part: feature:3636144-3636389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3644076-3644317:-1:exon

position:3644076:-1
position: 3644076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3640043-3640130:-1:exon

position:3640043:-1
position: 3640043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3640130:-1
position: 3640130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3637677-3637754:-1:exon

position:3637677:-1
position: 3637677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3637754:-1
position: 3637754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3637186-3637285:-1:exon

position:3637186:-1
position: 3637186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3637285:-1
position: 3637285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3636144-3636389:-1:exon

position:3636389:-1
position: 3636389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ppdpf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ppdpf
product: pancreatic progenitor cell differentiation and proliferation factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033041359.1
SIO_010081: ppdpf
subclass of: SO_0000673
so part of: ppdpf
location: complement(join(3636144..3636389,3637186..3637285,3637677..3637754,3640043..3640130,3643217..3643349))
location: region:3636144-3643349:-1
so has part: feature:3643217-3643349:-1:exon
so has part: feature:3640043-3640130:-1:exon
so has part: feature:3637677-3637754:-1:exon
so has part: feature:3637186-3637285:-1:exon
so has part: feature:3636144-3636389:-1:exon

position:3643349:-1
position: 3643349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3643217-3643349:-1:exon

position:3643217:-1
position: 3643217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3640043-3640130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3637677-3637754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3637186-3637285:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3636144-3636389:-1:exon

ppdpf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ppdpf
product: pancreatic progenitor cell differentiation and proliferation factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033041361.1
SIO_010081: ppdpf
subclass of: SO_0000673
so part of: ppdpf
location: complement(join(3636144..3636389,3637186..3637285,3637677..3637754,3640043..3640130,3642238..3642257))
location: region:3636144-3642257:-1
so has part: feature:3642238-3642257:-1:exon
so has part: feature:3640043-3640130:-1:exon
so has part: feature:3637677-3637754:-1:exon
so has part: feature:3637186-3637285:-1:exon
so has part: feature:3636144-3636389:-1:exon

position:3642257:-1
position: 3642257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3642238-3642257:-1:exon

position:3642238:-1
position: 3642238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3640043-3640130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3637677-3637754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3637186-3637285:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3636144-3636389:-1:exon

ppdpf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ppdpf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pancreatic progenitor cell differentiation and proliferation factor
translation: MASIPSTGSLAATHDYYRRRIGSTSSNSSCGSSEHIGEIIPHTPGLPKSASGQWWLSFFFGKTQNLPVMTTVTESSESGKINCILPQDMVRKRHVSEPSKPSS
SIO_010081: ppdpf
subclass of: SO_0000673
so part of: ppdpf
location: complement(join(3636311..3636389,3637186..3637285,3637677..3637754,3640043..3640097))
location: region:3636311-3640097:-1
so has part: feature:3640043-3640097:-1:exon
so has part: feature:3637677-3637754:-1:exon
so has part: feature:3637186-3637285:-1:exon
so has part: feature:3636311-3636389:-1:exon

XP_032897249.1
type: Protein
SIO_000068: ncbiprotein

position:3636311:-1
position: 3636311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3640097:-1
position: 3640097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3640043-3640097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3637677-3637754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3637186-3637285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3636311-3636389:-1:exon

ppdpf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ppdpf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pancreatic progenitor cell differentiation and proliferation factor
translation: MASIPSTGSLAATHDYYRRRIGSTSSNSSCGSSEHIGEIIPHTPGLPKSASGQWWLSFFFGKTQNLPVMTTVTESSESGKINCILPQDMVRKRHVSEPSKPSS
SIO_010081: ppdpf
subclass of: SO_0000673
so part of: ppdpf
location: complement(join(3636311..3636389,3637186..3637285,3637677..3637754,3640043..3640097))
location: region:3636311-3640097:-1
so has part: feature:3640043-3640097:-1:exon
so has part: feature:3637677-3637754:-1:exon
so has part: feature:3637186-3637285:-1:exon
so has part: feature:3636311-3636389:-1:exon

XP_032897250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3640043-3640097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3637677-3637754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3637186-3637285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3636311-3636389:-1:exon

ppdpf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ppdpf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pancreatic progenitor cell differentiation and proliferation factor
translation: MASIPSTGSLAATHDYYRRRIGSTSSNSSCGSSEHIGEIIPHTPGLPKSASGQWWLSFFFGKTQNLPVMTTVTESSESGKINCILPQDMVRKRHVSEPSKPSS
SIO_010081: ppdpf
subclass of: SO_0000673
so part of: ppdpf
location: complement(join(3636311..3636389,3637186..3637285,3637677..3637754,3640043..3640097))
location: region:3636311-3640097:-1
so has part: feature:3640043-3640097:-1:exon
so has part: feature:3637677-3637754:-1:exon
so has part: feature:3637186-3637285:-1:exon
so has part: feature:3636311-3636389:-1:exon

XP_032897252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3640043-3640097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3637677-3637754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3637186-3637285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3636311-3636389:-1:exon

trnae-cuc
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trnae-cuc
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3645519..3645590
location: region:3645519-3645590:1
so has part: feature:3645519-3645590:1:exon
subclass of: SO_0000663

116986549
type: Gene
SIO_000068: ncbigene

position:3645519:1
position: 3645519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3645590:1
position: 3645590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3645519-3645590:1:exon

trnae-cuc
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 386614
gene: trnae-cuc
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3645552..3645554,aa:Glu,seq:ctc)
SIO_010081: trnae-cuc
subclass of: SO_0000673
so part of: trnae-cuc
location: 3645519..3645590
location: region:3645519-3645590:1
so has part: feature:3645519-3645590:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3645519-3645590:1:exon

LOC116986156
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986156
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3647871..3654010)
location: region:3647871-3654010:-1
so has part: feature:3647871-3654010:-1:exon
subclass of: SO_0000010

116986156
type: Gene
SIO_000068: ncbigene

position:3647871:-1
position: 3647871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3654010:-1
position: 3654010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3647871-3654010:-1:exon

LOC116986156
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986156
product: hairy/enhancer-of-split related with YRPW motif protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033041363.1
SIO_010081: LOC116986156
subclass of: SO_0000673
so part of: LOC116986156
location: complement(join(3647871..3648392,3650999..3651080,3653073..3653156,3653274..3653346,3653735..3653788,3653825..3654010))
location: region:3647871-3654010:-1
so has part: feature:3653825-3654010:-1:exon
so has part: feature:3653735-3653788:-1:exon
so has part: feature:3653274-3653346:-1:exon
so has part: feature:3653073-3653156:-1:exon
so has part: feature:3650999-3651080:-1:exon
so has part: feature:3647871-3648392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3653825-3654010:-1:exon

position:3653825:-1
position: 3653825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3653735-3653788:-1:exon

position:3653735:-1
position: 3653735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3653788:-1
position: 3653788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3653274-3653346:-1:exon

position:3653274:-1
position: 3653274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3653346:-1
position: 3653346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3653073-3653156:-1:exon

position:3653073:-1
position: 3653073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3653156:-1
position: 3653156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3650999-3651080:-1:exon

position:3650999:-1
position: 3650999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3651080:-1
position: 3651080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3647871-3648392:-1:exon

position:3648392:-1
position: 3648392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116986156
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986156
product: hairy/enhancer-of-split related with YRPW motif protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033041364.1
SIO_010081: LOC116986156
subclass of: SO_0000673
so part of: LOC116986156
location: complement(join(3647871..3648392,3650999..3651080,3653073..3653156,3653274..3653346,3653735..3653775,3653812..3654010))
location: region:3647871-3654010:-1
so has part: feature:3653812-3654010:-1:exon
so has part: feature:3653735-3653775:-1:exon
so has part: feature:3653274-3653346:-1:exon
so has part: feature:3653073-3653156:-1:exon
so has part: feature:3650999-3651080:-1:exon
so has part: feature:3647871-3648392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3653812-3654010:-1:exon

position:3653812:-1
position: 3653812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3653735-3653775:-1:exon

position:3653775:-1
position: 3653775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3653274-3653346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3653073-3653156:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3650999-3651080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3647871-3648392:-1:exon

LOC116986156
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986156
product: hairy/enhancer-of-split related with YRPW motif protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033041362.1
SIO_010081: LOC116986156
subclass of: SO_0000673
so part of: LOC116986156
location: complement(join(3647871..3648392,3650999..3651080,3653073..3653156,3653274..3653346,3653735..3654009))
location: region:3647871-3654009:-1
so has part: feature:3653735-3654009:-1:exon
so has part: feature:3653274-3653346:-1:exon
so has part: feature:3653073-3653156:-1:exon
so has part: feature:3650999-3651080:-1:exon
so has part: feature:3647871-3648392:-1:exon

position:3654009:-1
position: 3654009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3653735-3654009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3653274-3653346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3653073-3653156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3650999-3651080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3647871-3648392:-1:exon

LOC116986156
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986156
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hairy/enhancer-of-split related with YRPW motif protein 1-like isoform X2
translation: MQSTGQLAMQKRPMQSTGQIGSVQSTSSDSELDIDDEKGSRKGSHPGKPAAVSRKQARRKRRGIVEKRRRDRINHSLSELRRLVPCASEKQGSTKLEKAEILQMTVDHLKVLHTSRGRGYMETPELATDYGVLGFRECLWEVARYLSVTEGLGRSDTPQSRLVSHLSTCASQREAATLESQRQRWSAGCARQAAMSRVRAGILAGLFPTVSCLRLEQFRRMSPLPAGRVLPMLTNTEPAPPLATAAATPSRLLPAPAATSQLQAVKIGQHLWATAVGAF
SIO_010081: LOC116986156
subclass of: SO_0000673
so part of: LOC116986156
location: complement(join(3647908..3648392,3650999..3651080,3653073..3653156,3653274..3653346,3653735..3653788,3653825..3653886))
location: region:3647908-3653886:-1
so has part: feature:3653825-3653886:-1:exon
so has part: feature:3653735-3653788:-1:exon
so has part: feature:3653274-3653346:-1:exon
so has part: feature:3653073-3653156:-1:exon
so has part: feature:3650999-3651080:-1:exon
so has part: feature:3647908-3648392:-1:exon

XP_032897254.1
type: Protein
SIO_000068: ncbiprotein

position:3647908:-1
position: 3647908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3653886:-1
position: 3653886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3653825-3653886:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3653735-3653788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3653274-3653346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3653073-3653156:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3650999-3651080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3647908-3648392:-1:exon

LOC116986156
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986156
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hairy/enhancer-of-split related with YRPW motif protein 1-like isoform X3
translation: MQSTGQLAMQKRPMQSTGQIGSVQSTSSDSELDIDDEKGSRKGSHPGKPAAVSRKQARRKRRGIVEKRRRDRINHSLSELRRLVPCASEKQGSTKLEKAEILQMTVDHLKVLHTSRGRGYMETPELATDYGVLGFRECLWEVARYLSVTEGLGRSDTPQSRLVSHLSTCASQREAATLESQRQRWSAGCARQAAMSRVRAGILAGLFPTVSCLRLEQFRRMSPLPAGRVLPMLTNTEPAPPLATAAATPSRLLPAPAATSQLQAVKIGQHLWATAVGAF
SIO_010081: LOC116986156
subclass of: SO_0000673
so part of: LOC116986156
location: complement(join(3647908..3648392,3650999..3651080,3653073..3653156,3653274..3653346,3653735..3653775,3653812..3653886))
location: region:3647908-3653886:-1
so has part: feature:3653812-3653886:-1:exon
so has part: feature:3653735-3653775:-1:exon
so has part: feature:3653274-3653346:-1:exon
so has part: feature:3653073-3653156:-1:exon
so has part: feature:3650999-3651080:-1:exon
so has part: feature:3647908-3648392:-1:exon

XP_032897255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3653812-3653886:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3653735-3653775:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3653274-3653346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3653073-3653156:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3650999-3651080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3647908-3648392:-1:exon

LOC116986156
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986156
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hairy/enhancer-of-split related with YRPW motif protein 2-like isoform X1
translation: MQSTGQLAMQKRPMQSTGQIGSVQSTGQLAMQRSVQSTSSDSELDIDDEKGSRKGSHPGKPAAVSRKQARRKRRGIVEKRRRDRINHSLSELRRLVPCASEKQGSTKLEKAEILQMTVDHLKVLHTSRGRGYMETPELATDYGVLGFRECLWEVARYLSVTEGLGRSDTPQSRLVSHLSTCASQREAATLESQRQRWSAGCARQAAMSRVRAGILAGLFPTVSCLRLEQFRRMSPLPAGRVLPMLTNTEPAPPLATAAATPSRLLPAPAATSQLQAVKIGQHLWATAVGAF
SIO_010081: LOC116986156
subclass of: SO_0000673
so part of: LOC116986156
location: complement(join(3647908..3648392,3650999..3651080,3653073..3653156,3653274..3653346,3653735..3653886))
location: region:3647908-3653886:-1
so has part: feature:3653735-3653886:-1:exon
so has part: feature:3653274-3653346:-1:exon
so has part: feature:3653073-3653156:-1:exon
so has part: feature:3650999-3651080:-1:exon
so has part: feature:3647908-3648392:-1:exon

XP_032897253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3653735-3653886:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3653274-3653346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3653073-3653156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3650999-3651080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3647908-3648392:-1:exon

tpd52l2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3660161..3705678)
location: region:3660161-3705678:-1
so has part: feature:3660161-3705678:-1:exon
subclass of: SO_0000010

116986157
type: Gene
SIO_000068: ncbigene

position:3660161:-1
position: 3660161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3705678:-1
position: 3705678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3660161-3705678:-1:exon

tpd52l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpd52l2
product: TPD52 like 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033041375.1
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660161..3661081,3673284..3673332,3673847..3673891,3675389..3675415,3681661..3681762,3695666..3695814,3700998..3701107,3705550..3705678))
location: region:3660161-3705678:-1
so has part: feature:3705550-3705678:-1:exon
so has part: feature:3700998-3701107:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673891:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660161-3661081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705678:-1:exon

position:3705550:-1
position: 3705550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701107:-1:exon

position:3700998:-1
position: 3700998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3701107:-1
position: 3701107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

position:3695666:-1
position: 3695666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3695814:-1
position: 3695814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3681661-3681762:-1:exon

position:3681661:-1
position: 3681661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3681762:-1
position: 3681762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3675389-3675415:-1:exon

position:3675389:-1
position: 3675389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3675415:-1
position: 3675415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3673847-3673891:-1:exon

position:3673847:-1
position: 3673847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3673891:-1
position: 3673891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3673284-3673332:-1:exon

position:3673284:-1
position: 3673284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3673332:-1
position: 3673332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3660161-3661081:-1:exon

position:3661081:-1
position: 3661081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tpd52l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpd52l2
product: TPD52 like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033041367.1
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660161..3661081,3673284..3673332,3673847..3673891,3675389..3675415,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701107,3705550..3705678))
location: region:3660161-3705678:-1
so has part: feature:3705550-3705678:-1:exon
so has part: feature:3700998-3701107:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673891:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660161-3661081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

position:3687619:-1
position: 3687619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3687678:-1
position: 3687678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673847-3673891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3660161-3661081:-1:exon

tpd52l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpd52l2
product: TPD52 like 2, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033041378.1
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660161..3661081,3673284..3673332,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701107,3705550..3705677))
location: region:3660161-3705677:-1
so has part: feature:3705550-3705677:-1:exon
so has part: feature:3700998-3701107:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660161-3661081:-1:exon

position:3705677:-1
position: 3705677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705677:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3660161-3661081:-1:exon

tpd52l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpd52l2
product: TPD52 like 2, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033041377.1
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660161..3661081,3673284..3673332,3673847..3673888,3681661..3681762,3695666..3695814,3700998..3701134,3705550..3705674))
location: region:3660161-3705674:-1
so has part: feature:3705550-3705674:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3673847-3673888:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660161-3661081:-1:exon

position:3705674:-1
position: 3705674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

position:3701134:-1
position: 3701134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3673847-3673888:-1:exon

position:3673888:-1
position: 3673888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3660161-3661081:-1:exon

tpd52l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpd52l2
product: TPD52 like 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033041372.1
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660161..3661081,3673284..3673332,3673847..3673888,3675389..3675415,3681661..3681762,3695666..3695814,3700998..3701134,3705550..3705674))
location: region:3660161-3705674:-1
so has part: feature:3705550-3705674:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673888:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660161-3661081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3673847-3673888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3660161-3661081:-1:exon

tpd52l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpd52l2
product: TPD52 like 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033041369.1
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660161..3661081,3673284..3673332,3673847..3673891,3675389..3675415,3681661..3681762,3695666..3695814,3700998..3701134,3705550..3705674))
location: region:3660161-3705674:-1
so has part: feature:3705550-3705674:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673891:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660161-3661081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3673847-3673891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3660161-3661081:-1:exon

tpd52l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpd52l2
product: TPD52 like 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033041368.1
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660161..3661081,3673284..3673332,3673847..3673888,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701134,3705550..3705674))
location: region:3660161-3705674:-1
so has part: feature:3705550-3705674:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3673847-3673888:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660161-3661081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3673847-3673888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3660161-3661081:-1:exon

tpd52l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpd52l2
product: TPD52 like 2, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033041379.1
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660161..3661081,3668486..3668541,3673284..3673332,3673847..3673888,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701134,3705550..3705674))
location: region:3660161-3705674:-1
so has part: feature:3705550-3705674:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3673847-3673888:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3668486-3668541:-1:exon
so has part: feature:3660161-3661081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3673847-3673888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3668486-3668541:-1:exon

position:3668486:-1
position: 3668486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3668541:-1
position: 3668541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3660161-3661081:-1:exon

tpd52l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpd52l2
product: TPD52 like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033041366.1
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660161..3661081,3673284..3673332,3673847..3673888,3675389..3675415,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701134,3705550..3705674))
location: region:3660161-3705674:-1
so has part: feature:3705550-3705674:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673888:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660161-3661081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673847-3673888:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3660161-3661081:-1:exon

tpd52l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpd52l2
product: TPD52 like 2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033041376.1
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660161..3661081,3668486..3668541,3673284..3673332,3673847..3673888,3675389..3675415,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701134,3705550..3705674))
location: region:3660161-3705674:-1
so has part: feature:3705550-3705674:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673888:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3668486-3668541:-1:exon
so has part: feature:3660161-3661081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673847-3673888:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3668486-3668541:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3660161-3661081:-1:exon

tpd52l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpd52l2
product: TPD52 like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033041365.1
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660161..3661081,3673284..3673332,3673847..3673891,3675389..3675415,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701134,3705550..3705674))
location: region:3660161-3705674:-1
so has part: feature:3705550-3705674:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673891:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660161-3661081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673847-3673891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3660161-3661081:-1:exon

tpd52l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpd52l2
product: TPD52 like 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033041374.1
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660161..3661081,3668486..3668541,3673284..3673332,3673847..3673891,3675389..3675415,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701134,3705550..3705674))
location: region:3660161-3705674:-1
so has part: feature:3705550-3705674:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673891:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3668486-3668541:-1:exon
so has part: feature:3660161-3661081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673847-3673891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3668486-3668541:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3660161-3661081:-1:exon

tpd52l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpd52l2
product: TPD52 like 2, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033041380.1
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660161..3661081,3673284..3673332,3681661..3681762,3695666..3695814,3700998..3701134,3705550..3705673))
location: region:3660161-3705673:-1
so has part: feature:3705550-3705673:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660161-3661081:-1:exon

position:3705673:-1
position: 3705673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3660161-3661081:-1:exon

tpd52l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpd52l2
product: TPD52 like 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033041373.1
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660161..3661081,3673284..3673332,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701134,3705550..3705673))
location: region:3660161-3705673:-1
so has part: feature:3705550-3705673:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660161-3661081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3660161-3661081:-1:exon

tpd52l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tpd52l2
product: TPD52 like 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033041371.1
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660161..3661081,3673284..3673332,3673847..3673891,3675389..3675415,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701107,3703465..3703575,3705550..3705668))
location: region:3660161-3705668:-1
so has part: feature:3705550-3705668:-1:exon
so has part: feature:3703465-3703575:-1:exon
so has part: feature:3700998-3701107:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673891:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660161-3661081:-1:exon

position:3705668:-1
position: 3705668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3703465-3703575:-1:exon

position:3703465:-1
position: 3703465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3703575:-1
position: 3703575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3700998-3701107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3673847-3673891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3660161-3661081:-1:exon

tpd52l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D54 isoform X10
translation: MDAPSQGLPEHMIDVPVDTPAGGDGVGVLSEVETEELKSELIKVEDEIATLRQVLAAKEKHAAEIKRKLGLTTFNELKQNLSKGWQDVQASNAYKKTSATLSTAGSKTSSAISSVGSVLSRTLGEIKSHPFSQSFSSSYSIRHSISMPAMRESPTFKSFEESVGNLKAKVIGNENNAKDGYQSPTATSPTAEEKLPQDSAPF
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660974..3661081,3673284..3673332,3673847..3673891,3675389..3675415,3681661..3681762,3695666..3695814,3700998..3701107,3705550..3705568))
location: region:3660974-3705568:-1
so has part: feature:3705550-3705568:-1:exon
so has part: feature:3700998-3701107:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673891:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660974-3661081:-1:exon

XP_032897266.1
type: Protein
SIO_000068: ncbiprotein

position:3660974:-1
position: 3660974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3705568:-1
position: 3705568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3673847-3673891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3660974-3661081:-1:exon

tpd52l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D54 isoform X13
translation: MDAPSQGLPEHMIDVPVDTPAGGDGVGVLSEVETEELKSELIKVEDEIATLRQVLAAKEKHAAEIKRKLGLTTFNELKQNLSKGWQDVQASNAYKGASVKVEDLNKTITQSEVYKKTSATLSTAGSKTSSAISSVGSVLSRTLGEIKESPTFKSFEESVGNLKAKVIGNENNAKDGYQSPTATSPTAEEKLPQDSAPF
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660974..3661081,3673284..3673332,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701107,3705550..3705568))
location: region:3660974-3705568:-1
so has part: feature:3705550-3705568:-1:exon
so has part: feature:3700998-3701107:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660974-3661081:-1:exon

XP_032897269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3660974-3661081:-1:exon

tpd52l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D54 isoform X3
translation: MDAPSQGLPEHMIDVPVDTPAGGDGVGVLSEVETEELKSELIKVEDEIATLRQVLAAKEKHAAEIKRKLGLTTFNELKQNLSKGWQDVQASNAYKGASVKVEDLNKTITQSEVYKKTSATLSTAGSKTSSAISSVGSVLSRTLGEIKSHPFSQSFSSSYSIRHSISMPAMRESPTFKSFEESVGNLKAKVIGNENNAKDGYQSPTATSPTAEEKLPQDSAPF
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660974..3661081,3673284..3673332,3673847..3673891,3675389..3675415,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701107,3705550..3705568))
location: region:3660974-3705568:-1
so has part: feature:3705550-3705568:-1:exon
so has part: feature:3700998-3701107:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673891:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660974-3661081:-1:exon

XP_032897258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673847-3673891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3660974-3661081:-1:exon

tpd52l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D54 isoform X15
translation: MDAPSQDINLNSPNKGLPEHMIDVPVDTPAGGDGVGVLSEVETEELKSELIKVEDEIATLRQVLAAKEKHAAEIKRKLGLTTFNELKQNLSKGWQDVQASNAYKKTSATLSTAGSKTSSAISSVGSVLSRTLGEIKESPTFKSFEESVGNLKAKVIGNENNAKDGYQSPTATSPTAEEKLPQDSAPF
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660974..3661081,3673284..3673332,3681661..3681762,3695666..3695814,3700998..3701134,3705550..3705568))
location: region:3660974-3705568:-1
so has part: feature:3705550-3705568:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660974-3661081:-1:exon

XP_032897271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3660974-3661081:-1:exon

tpd52l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D54 isoform X12
translation: MDAPSQDINLNSPNKGLPEHMIDVPVDTPAGGDGVGVLSEVETEELKSELIKVEDEIATLRQVLAAKEKHAAEIKRKLGLTTFNELKQNLSKGWQDVQASNAYKKTSATLSTAGSKTSSAISSVGSVLSRTLGEINSYSIRHSISMPAMRESPTFKSFEESVGNLKAKVIGNENNAKDGYQSPTATSPTAEEKLPQDSAPF
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660974..3661081,3673284..3673332,3673847..3673888,3681661..3681762,3695666..3695814,3700998..3701134,3705550..3705568))
location: region:3660974-3705568:-1
so has part: feature:3705550-3705568:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3673847-3673888:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660974-3661081:-1:exon

XP_032897268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3673847-3673888:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3660974-3661081:-1:exon

tpd52l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D54 isoform X7
translation: MDAPSQDINLNSPNKGLPEHMIDVPVDTPAGGDGVGVLSEVETEELKSELIKVEDEIATLRQVLAAKEKHAAEIKRKLGLTTFNELKQNLSKGWQDVQASNAYKKTSATLSTAGSKTSSAISSVGSVLSRTLGEIKSHPFSQSFSSYSIRHSISMPAMRESPTFKSFEESVGNLKAKVIGNENNAKDGYQSPTATSPTAEEKLPQDSAPF
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660974..3661081,3673284..3673332,3673847..3673888,3675389..3675415,3681661..3681762,3695666..3695814,3700998..3701134,3705550..3705568))
location: region:3660974-3705568:-1
so has part: feature:3705550-3705568:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673888:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660974-3661081:-1:exon

XP_032897263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3673847-3673888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3660974-3661081:-1:exon

tpd52l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D54 isoform X5
translation: MDAPSQDINLNSPNKGLPEHMIDVPVDTPAGGDGVGVLSEVETEELKSELIKVEDEIATLRQVLAAKEKHAAEIKRKLGLTTFNELKQNLSKGWQDVQASNAYKKTSATLSTAGSKTSSAISSVGSVLSRTLGEIKSHPFSQSFSSSYSIRHSISMPAMRESPTFKSFEESVGNLKAKVIGNENNAKDGYQSPTATSPTAEEKLPQDSAPF
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660974..3661081,3673284..3673332,3673847..3673891,3675389..3675415,3681661..3681762,3695666..3695814,3700998..3701134,3705550..3705568))
location: region:3660974-3705568:-1
so has part: feature:3705550-3705568:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673891:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660974-3661081:-1:exon

XP_032897260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3673847-3673891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3660974-3661081:-1:exon

tpd52l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D54 isoform X8
translation: MDAPSQDINLNSPNKGLPEHMIDVPVDTPAGGDGVGVLSEVETEELKSELIKVEDEIATLRQVLAAKEKHAAEIKRKLGLTTFNELKQNLSKGWQDVQASNAYKGASVKVEDLNKTITQSEVYKKTSATLSTAGSKTSSAISSVGSVLSRTLGEIKESPTFKSFEESVGNLKAKVIGNENNAKDGYQSPTATSPTAEEKLPQDSAPF
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660974..3661081,3673284..3673332,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701134,3705550..3705568))
location: region:3660974-3705568:-1
so has part: feature:3705550-3705568:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660974-3661081:-1:exon

XP_032897264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3660974-3661081:-1:exon

tpd52l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D54 isoform X4
translation: MDAPSQDINLNSPNKGLPEHMIDVPVDTPAGGDGVGVLSEVETEELKSELIKVEDEIATLRQVLAAKEKHAAEIKRKLGLTTFNELKQNLSKGWQDVQASNAYKGASVKVEDLNKTITQSEVYKKTSATLSTAGSKTSSAISSVGSVLSRTLGEINSYSIRHSISMPAMRESPTFKSFEESVGNLKAKVIGNENNAKDGYQSPTATSPTAEEKLPQDSAPF
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660974..3661081,3673284..3673332,3673847..3673888,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701134,3705550..3705568))
location: region:3660974-3705568:-1
so has part: feature:3705550-3705568:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3673847-3673888:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660974-3661081:-1:exon

XP_032897259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3673847-3673888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3660974-3661081:-1:exon

tpd52l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D54 isoform X2
translation: MDAPSQDINLNSPNKGLPEHMIDVPVDTPAGGDGVGVLSEVETEELKSELIKVEDEIATLRQVLAAKEKHAAEIKRKLGLTTFNELKQNLSKGWQDVQASNAYKGASVKVEDLNKTITQSEVYKKTSATLSTAGSKTSSAISSVGSVLSRTLGEIKSHPFSQSFSSYSIRHSISMPAMRESPTFKSFEESVGNLKAKVIGNENNAKDGYQSPTATSPTAEEKLPQDSAPF
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660974..3661081,3673284..3673332,3673847..3673888,3675389..3675415,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701134,3705550..3705568))
location: region:3660974-3705568:-1
so has part: feature:3705550-3705568:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673888:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660974-3661081:-1:exon

XP_032897257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673847-3673888:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3660974-3661081:-1:exon

tpd52l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D54 isoform X1
translation: MDAPSQDINLNSPNKGLPEHMIDVPVDTPAGGDGVGVLSEVETEELKSELIKVEDEIATLRQVLAAKEKHAAEIKRKLGLTTFNELKQNLSKGWQDVQASNAYKGASVKVEDLNKTITQSEVYKKTSATLSTAGSKTSSAISSVGSVLSRTLGEIKSHPFSQSFSSSYSIRHSISMPAMRESPTFKSFEESVGNLKAKVIGNENNAKDGYQSPTATSPTAEEKLPQDSAPF
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660974..3661081,3673284..3673332,3673847..3673891,3675389..3675415,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701134,3705550..3705568))
location: region:3660974-3705568:-1
so has part: feature:3705550-3705568:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673891:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660974-3661081:-1:exon

XP_032897256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673847-3673891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3660974-3661081:-1:exon

tpd52l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D54 isoform X6
translation: MIDVPVDTPAGGDGVGVLSEVETEELKSELIKVEDEIATLRQVLAAKEKHAAEIKRKLGLTTFNELKQNLSKGWQDVQASNAYKGASVKVEDLNKTITQSEVYKKTSATLSTAGSKTSSAISSVGSVLSRTLGEIKSHPFSQSFSSSYSIRHSISMPAMRESPTFKSFEESVGNLKAKVIGNENNAKDGYQSPTATSPTAEEKLPQDSAPF
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3660974..3661081,3673284..3673332,3673847..3673891,3675389..3675415,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701093))
location: region:3660974-3701093:-1
so has part: feature:3700998-3701093:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673891:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3660974-3661081:-1:exon

XP_032897262.1
type: Protein
SIO_000068: ncbiprotein

position:3701093:-1
position: 3701093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3700998-3701093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3673847-3673891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3660974-3661081:-1:exon

tpd52l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D54 isoform X14
translation: MDAPSQDINLNSPNKGLPEHMIDVPVDTPAGGDGVGVLSEVETEELKSELIKVEDEIATLRQVLAAKEKHAAEIKRKLGLTTFNELKQNLSKGWQDVQASNAYKGASVKVEDLNKTITQSEVYKKTSATLSTAGSKTSSAISSVGSVLSRTLGEINSYSIRHSISMPAMRESPTFKSFEESVGNLKLFNSKT
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3668521..3668541,3673284..3673332,3673847..3673888,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701134,3705550..3705568))
location: region:3668521-3705568:-1
so has part: feature:3705550-3705568:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3673847-3673888:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3668521-3668541:-1:exon

XP_032897270.1
type: Protein
SIO_000068: ncbiprotein

position:3668521:-1
position: 3668521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3673847-3673888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3668521-3668541:-1:exon

tpd52l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D54 isoform X11
translation: MDAPSQDINLNSPNKGLPEHMIDVPVDTPAGGDGVGVLSEVETEELKSELIKVEDEIATLRQVLAAKEKHAAEIKRKLGLTTFNELKQNLSKGWQDVQASNAYKGASVKVEDLNKTITQSEVYKKTSATLSTAGSKTSSAISSVGSVLSRTLGEIKSHPFSQSFSSYSIRHSISMPAMRESPTFKSFEESVGNLKLFNSKT
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3668521..3668541,3673284..3673332,3673847..3673888,3675389..3675415,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701134,3705550..3705568))
location: region:3668521-3705568:-1
so has part: feature:3705550-3705568:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673888:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3668521-3668541:-1:exon

XP_032897267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673847-3673888:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3668521-3668541:-1:exon

tpd52l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tpd52l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein D54 isoform X9
translation: MDAPSQDINLNSPNKGLPEHMIDVPVDTPAGGDGVGVLSEVETEELKSELIKVEDEIATLRQVLAAKEKHAAEIKRKLGLTTFNELKQNLSKGWQDVQASNAYKGASVKVEDLNKTITQSEVYKKTSATLSTAGSKTSSAISSVGSVLSRTLGEIKSHPFSQSFSSSYSIRHSISMPAMRESPTFKSFEESVGNLKLFNSKT
SIO_010081: tpd52l2
subclass of: SO_0000673
so part of: tpd52l2
location: complement(join(3668521..3668541,3673284..3673332,3673847..3673891,3675389..3675415,3681661..3681762,3687619..3687678,3695666..3695814,3700998..3701134,3705550..3705568))
location: region:3668521-3705568:-1
so has part: feature:3705550-3705568:-1:exon
so has part: feature:3700998-3701134:-1:exon
so has part: feature:3695666-3695814:-1:exon
so has part: feature:3687619-3687678:-1:exon
so has part: feature:3681661-3681762:-1:exon
so has part: feature:3675389-3675415:-1:exon
so has part: feature:3673847-3673891:-1:exon
so has part: feature:3673284-3673332:-1:exon
so has part: feature:3668521-3668541:-1:exon

XP_032897265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3705550-3705568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3700998-3701134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3695666-3695814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687619-3687678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3681661-3681762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3675389-3675415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673847-3673891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3673284-3673332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3668521-3668541:-1:exon

zbtb46
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: zbtb46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3725930..3776957
location: region:3725930-3776957:1
so has part: feature:3725930-3776957:1:exon
subclass of: SO_0000010

116986158
type: Gene
SIO_000068: ncbigene

position:3725930:1
position: 3725930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3776957:1
position: 3776957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3725930-3776957:1:exon

zbtb46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: zbtb46
product: zinc finger and BTB domain containing 46, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033041383.1
SIO_010081: zbtb46
subclass of: SO_0000673
so part of: zbtb46
location: join(3725930..3726103,3746173..3746288,3747226..3748205,3763434..3763688,3771522..3771697,3774646..3776957)
location: region:3725930-3776957:1
so has part: feature:3725930-3726103:1:exon
so has part: feature:3746173-3746288:1:exon
so has part: feature:3747226-3748205:1:exon
so has part: feature:3763434-3763688:1:exon
so has part: feature:3771522-3771697:1:exon
so has part: feature:3774646-3776957:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3725930-3726103:1:exon

position:3726103:1
position: 3726103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3746173-3746288:1:exon

position:3746173:1
position: 3746173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3746288:1
position: 3746288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3747226-3748205:1:exon

position:3747226:1
position: 3747226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3748205:1
position: 3748205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3763434-3763688:1:exon

position:3763434:1
position: 3763434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3763688:1
position: 3763688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3771522-3771697:1:exon

position:3771522:1
position: 3771522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3771697:1
position: 3771697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3774646-3776957:1:exon

position:3774646:1
position: 3774646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zbtb46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: zbtb46
product: zinc finger and BTB domain containing 46, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_033041384.1
SIO_010081: zbtb46
subclass of: SO_0000673
so part of: zbtb46
location: join(3726036..3726103,3746173..3746288,3747226..3748205,3771522..3771697,3774646..3776957)
location: region:3726036-3776957:1
so has part: feature:3726036-3726103:1:exon
so has part: feature:3746173-3746288:1:exon
so has part: feature:3747226-3748205:1:exon
so has part: feature:3771522-3771697:1:exon
so has part: feature:3774646-3776957:1:exon

position:3726036:1
position: 3726036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3726036-3726103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3746173-3746288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3747226-3748205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3771522-3771697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3774646-3776957:1:exon

zbtb46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: zbtb46
product: zinc finger and BTB domain containing 46, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033041382.1
SIO_010081: zbtb46
subclass of: SO_0000673
so part of: zbtb46
location: join(3726036..3726103,3746173..3746288,3747226..3748205,3763434..3763688,3767128..3767312,3767549..3767606,3767688..3770123)
location: region:3726036-3770123:1
so has part: feature:3726036-3726103:1:exon
so has part: feature:3746173-3746288:1:exon
so has part: feature:3747226-3748205:1:exon
so has part: feature:3763434-3763688:1:exon
so has part: feature:3767128-3767312:1:exon
so has part: feature:3767549-3767606:1:exon
so has part: feature:3767688-3770123:1:exon

position:3770123:1
position: 3770123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3726036-3726103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3746173-3746288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3747226-3748205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3763434-3763688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3767128-3767312:1:exon

position:3767128:1
position: 3767128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3767312:1
position: 3767312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3767549-3767606:1:exon

position:3767549:1
position: 3767549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3767606:1
position: 3767606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3767688-3770123:1:exon

position:3767688:1
position: 3767688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zbtb46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: zbtb46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 46 isoform X2
translation: MGRNWHYIDEGEGQREKERQIQKQQQYQSVNNRKDDMEIPSHYRHLLRELNEQRQHGILCDVCIIVEGKIFKAHKNVLLGSSRYFKTLYCQVQKMSSDQATVTHLDIVTAQGFKVIIDFMYSAHLALTSKNVIEVMSAASYLQMTDIVQACHSFIKAALDISIKTEPPDYIMEYDMGAPSSSSIDVVTPVAVGRSSSPWLERRRTSPANSSGDSAIASCHDGGSSYSKEEHEQKADSHDDVSSQSLWSSDIGYSSFRVKEEQISPSHYGGAELSEAHLGKSSTLVQTGFSDQVPVVWQLPGRKKNRKNKQTVRHITQHVEVDSRASSPMPSMLAVGGWPYNSRDGTGADVTEPSSSDSRGDRSDFCQNAEEPLAGVESSYLSQFVASVKEEQQVSTVANLRAALLSKHSFLSVKSDQPGDDKSIIFEYLPKVNEFTVIRKKFKCPYCSFSAMHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTLVHSKDKKYICKVCNRVFMSAASVGIMHGSRRHGICVDCAGGSLMSQLDQDGTDESPDGMFSAESHYPDDHGEGPYADDHGDGPYTDDPGEGPYTDDQGDGPYTDEHGDGPYTDDPGDGPYTDDHGDGPYPDGHAEEVYPDDHEGPYPEDHGEGPYPDDHGDREREIDEEMADGEEEMKWKDNVIPQADIILEAKEVIDSQQDQENQEIPVADDKDFGWISQEM
SIO_010081: zbtb46
subclass of: SO_0000673
so part of: zbtb46
location: join(3746230..3746288,3747226..3748205,3763434..3763688,3771522..3771697,3774646..3775317)
location: region:3746230-3775317:1
so has part: feature:3746230-3746288:1:exon
so has part: feature:3747226-3748205:1:exon
so has part: feature:3763434-3763688:1:exon
so has part: feature:3771522-3771697:1:exon
so has part: feature:3774646-3775317:1:exon

XP_032897274.1
type: Protein
SIO_000068: ncbiprotein

position:3746230:1
position: 3746230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3775317:1
position: 3775317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3746230-3746288:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3747226-3748205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3763434-3763688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3771522-3771697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3774646-3775317:1:exon

zbtb46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: zbtb46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 46 isoform X3
translation: MGRNWHYIDEGEGQREKERQIQKQQQYQSVNNRKDDMEIPSHYRHLLRELNEQRQHGILCDVCIIVEGKIFKAHKNVLLGSSRYFKTLYCQVQKMSSDQATVTHLDIVTAQGFKVIIDFMYSAHLALTSKNVIEVMSAASYLQMTDIVQACHSFIKAALDISIKTEPPDYIMEYDMGAPSSSSIDVVTPVAVGRSSSPWLERRRTSPANSSGDSAIASCHDGGSSYSKEEHEQKADSHDDVSSQSLWSSDIGYSSFRVKEEQISPSHYGGAELSEAHLGKSSTLVQTGFSDQVPVVWQLPGRKKNRKNKQTVRHITQHVEVDSRASSPMPSMLAVGGWPYNSRDGTVNEFTVIRKKFKCPYCSFSAMHQCILKRHMRSHTGERPYPCEICGKKFTRREHMKRHTLVHSKDKKYICKVCNRVFMSAASVGIMHGSRRHGICVDCAGGSLMSQLDQDGTDESPDGMFSAESHYPDDHGEGPYADDHGDGPYTDDPGEGPYTDDQGDGPYTDEHGDGPYTDDPGDGPYTDDHGDGPYPDGHAEEVYPDDHEGPYPEDHGEGPYPDDHGDREREIDEEMADGEEEMKWKDNVIPQADIILEAKEVIDSQQDQENQEIPVADDKDFGWISQEM
SIO_010081: zbtb46
subclass of: SO_0000673
so part of: zbtb46
location: join(3746230..3746288,3747226..3748205,3771522..3771697,3774646..3775317)
location: region:3746230-3775317:1
so has part: feature:3746230-3746288:1:exon
so has part: feature:3747226-3748205:1:exon
so has part: feature:3771522-3771697:1:exon
so has part: feature:3774646-3775317:1:exon

XP_032897275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3746230-3746288:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3747226-3748205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3771522-3771697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3774646-3775317:1:exon

zbtb46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: zbtb46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 46 isoform X1
translation: MGRNWHYIDEGEGQREKERQIQKQQQYQSVNNRKDDMEIPSHYRHLLRELNEQRQHGILCDVCIIVEGKIFKAHKNVLLGSSRYFKTLYCQVQKMSSDQATVTHLDIVTAQGFKVIIDFMYSAHLALTSKNVIEVMSAASYLQMTDIVQACHSFIKAALDISIKTEPPDYIMEYDMGAPSSSSIDVVTPVAVGRSSSPWLERRRTSPANSSGDSAIASCHDGGSSYSKEEHEQKADSHDDVSSQSLWSSDIGYSSFRVKEEQISPSHYGGAELSEAHLGKSSTLVQTGFSDQVPVVWQLPGRKKNRKNKQTVRHITQHVEVDSRASSPMPSMLAVGGWPYNSRDGTGADVTEPSSSDSRGDRSDFCQNAEEPLAGVESSYLSQFVASVKEEQQVSTVANLRAALLSKHSFLSVKSDQPGDDKSIIFEYLPKGPGNNLNHSEDAHDYQQRDLSPLTSQFPEPSPPRTLQCEEPLSDPISHQQADSRQQPDSPQQINVDNTEEILAQSYGSADSGLDARNAADFSTGEEAEMGTSFIADDGSAIGSSPLPTTGQQPLDEFACRFCSMRFSSLESHTEHEYQHALSILPHNISNQMMPHTTSFHMLPVLAFRYQCSKCPASFTLKSNAERHEKTVHFKRKKLECSFCLKSFRDRTDLNRHVASVHSCERAFVCSDCGKSFGVQKNLMNHMKICSHSGAQGDTELSDQPLDSQALKADENDCNSRTPALDSNQHLPTSQLSDTELSE
SIO_010081: zbtb46
subclass of: SO_0000673
so part of: zbtb46
location: join(3746230..3746288,3747226..3748205,3763434..3763688,3767128..3767312,3767549..3767606,3767688..3768382)
location: region:3746230-3768382:1
so has part: feature:3746230-3746288:1:exon
so has part: feature:3747226-3748205:1:exon
so has part: feature:3763434-3763688:1:exon
so has part: feature:3767128-3767312:1:exon
so has part: feature:3767549-3767606:1:exon
so has part: feature:3767688-3768382:1:exon

XP_032897273.1
type: Protein
SIO_000068: ncbiprotein

position:3768382:1
position: 3768382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3746230-3746288:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3747226-3748205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3763434-3763688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3767128-3767312:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3767549-3767606:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3767688-3768382:1:exon

LOC116986159
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3787433..3788654)
location: region:3787433-3788654:-1
so has part: feature:3787433-3788654:-1:exon
subclass of: SO_0000011

116986159
type: Gene
SIO_000068: ncbigene

position:3787433:-1
position: 3787433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3788654:-1
position: 3788654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3787433-3788654:-1:exon

LOC116986159
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116986159
product: uncharacterized LOC116986159
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004415427.1
SIO_010081: LOC116986159
subclass of: SO_0000673
so part of: LOC116986159
location: complement(join(3787433..3787981,3788168..3788654))
location: region:3787433-3788654:-1
so has part: feature:3788168-3788654:-1:exon
so has part: feature:3787433-3787981:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3788168-3788654:-1:exon

position:3788168:-1
position: 3788168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3787433-3787981:-1:exon

position:3787981:-1
position: 3787981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116986160
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3788925..3860234)
location: region:3788925-3860234:-1
so has part: feature:3788925-3860234:-1:exon
subclass of: SO_0000010

116986160
type: Gene
SIO_000068: ncbigene

position:3788925:-1
position: 3788925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3860234:-1
position: 3860234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3788925-3860234:-1:exon

LOC116986160
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986160
product: zinc finger protein 704-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033041386.1
SIO_010081: LOC116986160
subclass of: SO_0000673
so part of: LOC116986160
location: complement(join(3788925..3790716,3793667..3793782,3796273..3796377,3797200..3797461,3799453..3799553,3804008..3804240,3807239..3807348,3856203..3856444,3860071..3860234))
location: region:3788925-3860234:-1
so has part: feature:3860071-3860234:-1:exon
so has part: feature:3856203-3856444:-1:exon
so has part: feature:3807239-3807348:-1:exon
so has part: feature:3804008-3804240:-1:exon
so has part: feature:3799453-3799553:-1:exon
so has part: feature:3797200-3797461:-1:exon
so has part: feature:3796273-3796377:-1:exon
so has part: feature:3793667-3793782:-1:exon
so has part: feature:3788925-3790716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3860071-3860234:-1:exon

position:3860071:-1
position: 3860071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3856203-3856444:-1:exon

position:3856203:-1
position: 3856203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3856444:-1
position: 3856444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3807239-3807348:-1:exon

position:3807239:-1
position: 3807239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3807348:-1
position: 3807348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3804008-3804240:-1:exon

position:3804008:-1
position: 3804008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3804240:-1
position: 3804240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3799453-3799553:-1:exon

position:3799453:-1
position: 3799453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3799553:-1
position: 3799553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3797200-3797461:-1:exon

position:3797200:-1
position: 3797200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3797461:-1
position: 3797461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3796273-3796377:-1:exon

position:3796273:-1
position: 3796273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3796377:-1
position: 3796377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3793667-3793782:-1:exon

position:3793667:-1
position: 3793667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3793782:-1
position: 3793782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3788925-3790716:-1:exon

position:3790716:-1
position: 3790716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116986160
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986160
product: zinc finger protein 704-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033041385.1
SIO_010081: LOC116986160
subclass of: SO_0000673
so part of: LOC116986160
location: complement(join(3788925..3790716,3793667..3793782,3796273..3796377,3797200..3797461,3799453..3799553,3804008..3804240,3807239..3807348,3856203..3856444,3857047..3857367))
location: region:3788925-3857367:-1
so has part: feature:3857047-3857367:-1:exon
so has part: feature:3856203-3856444:-1:exon
so has part: feature:3807239-3807348:-1:exon
so has part: feature:3804008-3804240:-1:exon
so has part: feature:3799453-3799553:-1:exon
so has part: feature:3797200-3797461:-1:exon
so has part: feature:3796273-3796377:-1:exon
so has part: feature:3793667-3793782:-1:exon
so has part: feature:3788925-3790716:-1:exon

position:3857367:-1
position: 3857367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3857047-3857367:-1:exon

position:3857047:-1
position: 3857047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3856203-3856444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3807239-3807348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3804008-3804240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3799453-3799553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3797200-3797461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3796273-3796377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3793667-3793782:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3788925-3790716:-1:exon

LOC116986160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 704-like isoform X1
translation: MSSKRLSKTYKVVGTKVCAPRAADEIRVSGVIQACRNDPSGSNVYTIMLDDGSLREYAEEDIFCIDVKVSGKGKYRYNQKMFLNCKNSESVAVPVEQVRSDESLRLAETRCLTAKRVEDRYLENKCKRVGEAERECAARPLGSVSEQKRLLASPNIDVPHRKPSEEADMDEVMAAAVLTSLSTSPLVLSPNTGTQLLDKVLKEGPSLSVSFDSSTTSGNWSWDVPSDHSNPSTPSPPLPADGSKPCPLSGQSDDGIDEPEATHFLFEEPTPRKRKNSMKVMFKCLWKNCGKVLSTSSGMQKHVRTLHLGHNVDLDLCDGEEDFYYSEIDVDVDSLTDGLSSLTPMSPTATMAPVFPSVDCGSSNPVSVRSEEKMVTPLSRSAPTNLYHVRTDHAYQATTPVSIPVTSKFCPNGSGFSISLQSPPVIFKGSQGPLTQIRPVSIVDKRQTSHPSLKVHTPLISSPKQGPGTRKPRGEGKKCRKVYGMENRDMWCTACRWKKACQRFVD
SIO_010081: LOC116986160
subclass of: SO_0000673
so part of: LOC116986160
location: complement(join(3790605..3790716,3793667..3793782,3796273..3796377,3797200..3797461,3799453..3799553,3804008..3804240,3807239..3807348,3856203..3856444,3857047..3857286))
location: region:3790605-3857286:-1
so has part: feature:3857047-3857286:-1:exon
so has part: feature:3856203-3856444:-1:exon
so has part: feature:3807239-3807348:-1:exon
so has part: feature:3804008-3804240:-1:exon
so has part: feature:3799453-3799553:-1:exon
so has part: feature:3797200-3797461:-1:exon
so has part: feature:3796273-3796377:-1:exon
so has part: feature:3793667-3793782:-1:exon
so has part: feature:3790605-3790716:-1:exon

XP_032897276.1
type: Protein
SIO_000068: ncbiprotein

position:3790605:-1
position: 3790605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3857286:-1
position: 3857286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3857047-3857286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3856203-3856444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3807239-3807348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3804008-3804240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3799453-3799553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3797200-3797461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3796273-3796377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3793667-3793782:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3790605-3790716:-1:exon

LOC116986160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 704-like isoform X2
translation: MFLNCKNSESVAVPVEQVRSDESLRLAETRCLTAKRVEDRYLENKCKRVGEAERECAARPLGSVSEQKRLLASPNIDVPHRKPSEEADMDEVMAAAVLTSLSTSPLVLSPNTGTQLLDKVLKEGPSLSVSFDSSTTSGNWSWDVPSDHSNPSTPSPPLPADGSKPCPLSGQSDDGIDEPEATHFLFEEPTPRKRKNSMKVMFKCLWKNCGKVLSTSSGMQKHVRTLHLGHNVDLDLCDGEEDFYYSEIDVDVDSLTDGLSSLTPMSPTATMAPVFPSVDCGSSNPVSVRSEEKMVTPLSRSAPTNLYHVRTDHAYQATTPVSIPVTSKFCPNGSGFSISLQSPPVIFKGSQGPLTQIRPVSIVDKRQTSHPSLKVHTPLISSPKQGPGTRKPRGEGKKCRKVYGMENRDMWCTACRWKKACQRFVD
SIO_010081: LOC116986160
subclass of: SO_0000673
so part of: LOC116986160
location: complement(join(3790605..3790716,3793667..3793782,3796273..3796377,3797200..3797461,3799453..3799553,3804008..3804240,3807239..3807348,3856203..3856444))
location: region:3790605-3856444:-1
so has part: feature:3856203-3856444:-1:exon
so has part: feature:3807239-3807348:-1:exon
so has part: feature:3804008-3804240:-1:exon
so has part: feature:3799453-3799553:-1:exon
so has part: feature:3797200-3797461:-1:exon
so has part: feature:3796273-3796377:-1:exon
so has part: feature:3793667-3793782:-1:exon
so has part: feature:3790605-3790716:-1:exon

XP_032897277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3856203-3856444:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3807239-3807348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3804008-3804240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3799453-3799553:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3797200-3797461:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3796273-3796377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3793667-3793782:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3790605-3790716:-1:exon

LOC116986161
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3879120..3927580)
location: region:3879120-3927580:-1
so has part: feature:3879120-3927580:-1:exon
subclass of: SO_0000010

116986161
type: Gene
SIO_000068: ncbigene

position:3879120:-1
position: 3879120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3927580:-1
position: 3927580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3879120-3927580:-1:exon

LOC116986161
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116986161
product: uncharacterized LOC116986161
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033041387.1
SIO_010081: LOC116986161
subclass of: SO_0000673
so part of: LOC116986161
location: complement(join(3879120..3880101,3886460..3886519,3894016..3894138,3895302..3895849,3897643..3897730,3899889..3899940,3903999..3904166,3927370..3927580))
location: region:3879120-3927580:-1
so has part: feature:3927370-3927580:-1:exon
so has part: feature:3903999-3904166:-1:exon
so has part: feature:3899889-3899940:-1:exon
so has part: feature:3897643-3897730:-1:exon
so has part: feature:3895302-3895849:-1:exon
so has part: feature:3894016-3894138:-1:exon
so has part: feature:3886460-3886519:-1:exon
so has part: feature:3879120-3880101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3927370-3927580:-1:exon

position:3927370:-1
position: 3927370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3903999-3904166:-1:exon

position:3903999:-1
position: 3903999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3904166:-1
position: 3904166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3899889-3899940:-1:exon

position:3899889:-1
position: 3899889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3899940:-1
position: 3899940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3897643-3897730:-1:exon

position:3897643:-1
position: 3897643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3897730:-1
position: 3897730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3895302-3895849:-1:exon

position:3895302:-1
position: 3895302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3895849:-1
position: 3895849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3894016-3894138:-1:exon

position:3894016:-1
position: 3894016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3894138:-1
position: 3894138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3886460-3886519:-1:exon

position:3886460:-1
position: 3886460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3886519:-1
position: 3886519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3879120-3880101:-1:exon

position:3880101:-1
position: 3880101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116986161
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116986161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116986161
translation: MAPLRPFIRTAGTAQEGQPSLLLSGSLAAGGSFLGFLVLAFLCNQCQRNNKEEKSRRDGVKLVGLSVGSTPQLRPVSLPEAGVRDPNRMFSSGDNGLRSWPASVDCLRQSGTELSEEFSENCRVPQLRELPNAPGSNYTGGKLVHSRKVHDTHFARPQVTKYTRPQSAVEDSLYESVGSNYEPVAIERQSNHRYGPNGREWAAPTRTQQGSKEPAANMDSPEYASIRKAKKKENNLNRQEKPFRRDIKNGCVLVPGSRICGEESRITENYADFSQAENFNWRMQGRQRSITDPDVMNSMGRTACGSQTEEQVYTNNVKGENKFVSKSHEKLHSMTDAEIAGMYSKVAKKAFRKGTPSPLNMGHRKDIPKLYSRSTGNINEEEPDYESIKSPHWHTGSQILGEKPCHTPVKERRWPVKLQEKSQDEEMADPGYEAIDLKWKRIVIAVGANRALNRAAEGQTENYYESISELQQSRACTSDGGREHFITGL
SIO_010081: LOC116986161
subclass of: SO_0000673
so part of: LOC116986161
location: complement(join(3879646..3880101,3886460..3886519,3894016..3894138,3895302..3895849,3897643..3897730,3899889..3899940,3903999..3904141))
location: region:3879646-3904141:-1
so has part: feature:3903999-3904141:-1:exon
so has part: feature:3899889-3899940:-1:exon
so has part: feature:3897643-3897730:-1:exon
so has part: feature:3895302-3895849:-1:exon
so has part: feature:3894016-3894138:-1:exon
so has part: feature:3886460-3886519:-1:exon
so has part: feature:3879646-3880101:-1:exon

XP_032897278.1
type: Protein
SIO_000068: ncbiprotein

position:3879646:-1
position: 3879646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3904141:-1
position: 3904141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3903999-3904141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3899889-3899940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3897643-3897730:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3895302-3895849:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3894016-3894138:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3886460-3886519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3879646-3880101:-1:exon

nkain4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: nkain4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3936970..4017890
location: region:3936970-4017890:1
so has part: feature:3936970-4017890:1:exon
subclass of: SO_0000010

116986162
type: Gene
SIO_000068: ncbigene

position:3936970:1
position: 3936970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4017890:1
position: 4017890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3936970-4017890:1:exon

nkain4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: nkain4
product: sodium/potassium transporting ATPase interacting 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033041391.1
SIO_010081: nkain4
subclass of: SO_0000673
so part of: nkain4
location: join(3936970..3937326,3977881..3978018,3981295..3981375,4000511..4000708,4009248..4009308,4016573..4017890)
location: region:3936970-4017890:1
so has part: feature:3936970-3937326:1:exon
so has part: feature:3977881-3978018:1:exon
so has part: feature:3981295-3981375:1:exon
so has part: feature:4000511-4000708:1:exon
so has part: feature:4009248-4009308:1:exon
so has part: feature:4016573-4017890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3936970-3937326:1:exon

position:3937326:1
position: 3937326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3977881-3978018:1:exon

position:3977881:1
position: 3977881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3978018:1
position: 3978018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3981295-3981375:1:exon

position:3981295:1
position: 3981295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3981375:1
position: 3981375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4000511-4000708:1:exon

position:4000511:1
position: 4000511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4000708:1
position: 4000708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4009248-4009308:1:exon

position:4009248:1
position: 4009248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4009308:1
position: 4009308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4016573-4017890:1:exon

position:4016573:1
position: 4016573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nkain4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: nkain4
product: sodium/potassium transporting ATPase interacting 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033041390.1
SIO_010081: nkain4
subclass of: SO_0000673
so part of: nkain4
location: join(3936972..3937326,3977881..3978018,3981295..3981375,4000511..4000708,4009248..4009308,4015546..4015634)
location: region:3936972-4015634:1
so has part: feature:3936972-3937326:1:exon
so has part: feature:3977881-3978018:1:exon
so has part: feature:3981295-3981375:1:exon
so has part: feature:4000511-4000708:1:exon
so has part: feature:4009248-4009308:1:exon
so has part: feature:4015546-4015634:1:exon

position:3936972:1
position: 3936972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4015634:1
position: 4015634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3936972-3937326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3977881-3978018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3981295-3981375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4000511-4000708:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4009248-4009308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4015546-4015634:1:exon

position:4015546:1
position: 4015546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nkain4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: nkain4
product: sodium/potassium transporting ATPase interacting 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033041388.1
SIO_010081: nkain4
subclass of: SO_0000673
so part of: nkain4
location: join(3936973..3937326,3977881..3978018,3981295..3981375,4000511..4000708,4009248..4009308,4015546..4015630,4016573..4017890)
location: region:3936973-4017890:1
so has part: feature:3936973-3937326:1:exon
so has part: feature:3977881-3978018:1:exon
so has part: feature:3981295-3981375:1:exon
so has part: feature:4000511-4000708:1:exon
so has part: feature:4009248-4009308:1:exon
so has part: feature:4015546-4015630:1:exon
so has part: feature:4016573-4017890:1:exon

position:3936973:1
position: 3936973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3936973-3937326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3977881-3978018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3981295-3981375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4000511-4000708:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4009248-4009308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4015546-4015630:1:exon

position:4015630:1
position: 4015630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4016573-4017890:1:exon

nkain4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: nkain4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit beta-1-interacting protein 4 isoform X3
translation: MGCCTGRCSFIFLCILQLLAALERQIFDFLGYQWAPILANFLHIIIVILGLFGTIQYRPRYIVVYAVWTALWVTWNIFIICFYLDVGGLSKESDLLTFNISVHHSWWSEHGPGCVRREMSSNHVRTLDGQSYVSVIGCVIDYQYIEVIHSSSQILLALAGFVYACYVISVSTEVDDSCLRK
SIO_010081: nkain4
subclass of: SO_0000673
so part of: nkain4
location: join(3937273..3937326,3977881..3978018,3981295..3981375,4000511..4000708,4009248..4009308,4016573..4016586)
location: region:3937273-4016586:1
so has part: feature:3937273-3937326:1:exon
so has part: feature:3977881-3978018:1:exon
so has part: feature:3981295-3981375:1:exon
so has part: feature:4000511-4000708:1:exon
so has part: feature:4009248-4009308:1:exon
so has part: feature:4016573-4016586:1:exon

XP_032897282.1
type: Protein
SIO_000068: ncbiprotein

position:3937273:1
position: 3937273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4016586:1
position: 4016586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3937273-3937326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3977881-3978018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3981295-3981375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4000511-4000708:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4009248-4009308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4016573-4016586:1:exon

nkain4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: nkain4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit beta-1-interacting protein 4 isoform X1
translation: MGCCTGRCSFIFLCILQLLAALERQIFDFLGYQWAPILANFLHIIIVILGLFGTIQYRPRYIVVYAVWTALWVTWNIFIICFYLDVGGLSKESDLLTFNISVHHSWWSEHGPGCVRREMSSNHVRTLDGQSYVSVIGCVIDYQYIEVIHSSSQILLALAGFVYACYVISVSTEVDDSFDFIGGFDSFSVYHVPQKPSHVLLKPIYLST
SIO_010081: nkain4
subclass of: SO_0000673
so part of: nkain4
location: join(3937273..3937326,3977881..3978018,3981295..3981375,4000511..4000708,4009248..4009308,4015546..4015630,4016573..4016582)
location: region:3937273-4016582:1
so has part: feature:3937273-3937326:1:exon
so has part: feature:3977881-3978018:1:exon
so has part: feature:3981295-3981375:1:exon
so has part: feature:4000511-4000708:1:exon
so has part: feature:4009248-4009308:1:exon
so has part: feature:4015546-4015630:1:exon
so has part: feature:4016573-4016582:1:exon

XP_032897279.1
type: Protein
SIO_000068: ncbiprotein

position:4016582:1
position: 4016582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3937273-3937326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3977881-3978018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3981295-3981375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4000511-4000708:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4009248-4009308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4015546-4015630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4016573-4016582:1:exon

nkain4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: nkain4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit beta-1-interacting protein 4 isoform X2
translation: MGCCTGRCSFIFLCILQLLAALERQIFDFLGYQWAPILANFLHIIIVILGLFGTIQYRPRYIVVYAVWTALWVTWNIFIICFYLDVGGLSKESDLLTFNISVHHSWWSEHGPGCVRREMSSNHVRTLDGQSYVSVIGCVIDYQYIEVIHSSSQILLALAGFVYACYVISVSTEVDDSFDFIGGFDSFSVYHVPQKPSHVLLKPIYL
SIO_010081: nkain4
subclass of: SO_0000673
so part of: nkain4
location: join(3937273..3937326,3977881..3978018,3981295..3981375,4000511..4000708,4009248..4009308,4015546..4015634)
location: region:3937273-4015634:1
so has part: feature:3937273-3937326:1:exon
so has part: feature:3977881-3978018:1:exon
so has part: feature:3981295-3981375:1:exon
so has part: feature:4000511-4000708:1:exon
so has part: feature:4009248-4009308:1:exon
so has part: feature:4015546-4015634:1:exon

XP_032897281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3937273-3937326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3977881-3978018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3981295-3981375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4000511-4000708:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4009248-4009308:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4015546-4015634:1:exon

ythdf1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ythdf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4047215..4083046
location: region:4047215-4083046:1
so has part: feature:4047215-4083046:1:exon
subclass of: SO_0000010

116986163
type: Gene
SIO_000068: ncbigene

position:4047215:1
position: 4047215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4083046:1
position: 4083046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4047215-4083046:1:exon

ythdf1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: ythdf1
product: YTH N6-methyladenosine RNA binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004415428.1
SIO_010081: ythdf1
so part of: ythdf1
location: join(4047215..4047438,4048593..4048617,4050044..4050123,4059408..4060937,4067721..4067760,4075387..4075494,4081576..4083046)
location: region:4047215-4083046:1
so has part: feature:4047215-4047438:1:exon
so has part: feature:4048593-4048617:1:exon
so has part: feature:4050044-4050123:1:exon
so has part: feature:4059408-4060937:1:exon
so has part: feature:4067721-4067760:1:exon
so has part: feature:4075387-4075494:1:exon
so has part: feature:4081576-4083046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4047215-4047438:1:exon

position:4047438:1
position: 4047438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4048593-4048617:1:exon

position:4048593:1
position: 4048593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4048617:1
position: 4048617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4050044-4050123:1:exon

position:4050044:1
position: 4050044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4050123:1
position: 4050123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4059408-4060937:1:exon

position:4059408:1
position: 4059408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4060937:1
position: 4060937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4067721-4067760:1:exon

position:4067721:1
position: 4067721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4067760:1
position: 4067760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4075387-4075494:1:exon

position:4075387:1
position: 4075387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4075494:1
position: 4075494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4081576-4083046:1:exon

position:4081576:1
position: 4081576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ythdf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ythdf1
product: YTH N6-methyladenosine RNA binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033041392.1
SIO_010081: ythdf1
subclass of: SO_0000673
so part of: ythdf1
location: join(4047216..4047438,4048593..4048617,4050044..4050123,4059408..4060937,4067721..4067760,4081576..4083046)
location: region:4047216-4083046:1
so has part: feature:4047216-4047438:1:exon
so has part: feature:4048593-4048617:1:exon
so has part: feature:4050044-4050123:1:exon
so has part: feature:4059408-4060937:1:exon
so has part: feature:4067721-4067760:1:exon
so has part: feature:4081576-4083046:1:exon

position:4047216:1
position: 4047216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4047216-4047438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4048593-4048617:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4050044-4050123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4059408-4060937:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4067721-4067760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4081576-4083046:1:exon

ythdf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ythdf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: YTH domain-containing family protein 1
translation: MSATSVDPQRAKGQENKVQNGSLHQKDAVHDNDFEPYLSSQSNQNNSYPSMTDPYLSSYYAPSIGFSYSLSEAAPWSTGGDPPIPYLTTYGQLSNGDHHFMHDAVFGQPGGLGNTPYLNQHRFNFFPENPGFSAWGTGGSQGQQTPSSAYGSSYSYPPSSLGGTIVDGQAGFPNDTLNKAPGMNSIEQGMVGLKIGGAVTSSGVKTVGSVVNSPGMTNAAPGNGSTACVSAPKPTSWAAIASKPAKPQPKLKPKTGASVGSSSLPPPPIKHNMDIGTWDNKGPVPKAPPPHQAPPTQAVPLQQLTQPPPQQQLQIPQQPFQNPQQSPQNRWIAPRNRGVAFGQNNGAGNENNSLGNVPISSPPSSETHPVLEKLKAAYSYNPKDFDWNVKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAYRSMAGKGPVYLLFSVNGSGHFCGVAEMKSAVDYGTCAGVWSQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATYKHTTSIFDDFSHYEKRQEEEEVVRKDKVSLPVASHYLQGAPESKQMIRKHLT
SIO_010081: ythdf1
subclass of: SO_0000673
so part of: ythdf1
location: join(4047412..4047438,4048593..4048617,4050044..4050123,4059408..4060937,4067721..4067760,4081576..4081619)
location: region:4047412-4081619:1
so has part: feature:4047412-4047438:1:exon
so has part: feature:4048593-4048617:1:exon
so has part: feature:4050044-4050123:1:exon
so has part: feature:4059408-4060937:1:exon
so has part: feature:4067721-4067760:1:exon
so has part: feature:4081576-4081619:1:exon

XP_032897283.1
type: Protein
SIO_000068: ncbiprotein

position:4047412:1
position: 4047412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4081619:1
position: 4081619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4047412-4047438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4048593-4048617:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4050044-4050123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4059408-4060937:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4067721-4067760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4081576-4081619:1:exon

LOC116986164
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116986164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4250437..4265096
location: region:4250437-4265096:1
so has part: feature:4250437-4265096:1:exon
subclass of: SO_0000011

116986164
type: Gene
SIO_000068: ncbigene

position:4250437:1
position: 4250437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4265096:1
position: 4265096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4250437-4265096:1:exon

LOC116986164
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116986164
product: uncharacterized LOC116986164
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004415429.1
SIO_010081: LOC116986164
subclass of: SO_0000673
so part of: LOC116986164
location: join(4250437..4250447,4254094..4254096,4265003..4265096)
location: region:4250437-4265096:1
so has part: feature:4250437-4250447:1:exon
so has part: feature:4254094-4254096:1:exon
so has part: feature:4265003-4265096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4250437-4250447:1:exon

position:4250447:1
position: 4250447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4254094-4254096:1:exon

position:4254094:1
position: 4254094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4254096:1
position: 4254096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4265003-4265096:1:exon

position:4265003:1
position: 4265003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bhlhe23
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: bhlhe23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4416428..4417363
location: region:4416428-4417363:1
so has part: feature:4416428-4417363:1:exon
subclass of: SO_0000010

116986081
type: Gene
SIO_000068: ncbigene

position:4416428:1
position: 4416428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4417363:1
position: 4417363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4416428-4417363:1:exon

bhlhe23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: bhlhe23
product: basic helix-loop-helix family member e23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033041261.1
SIO_010081: bhlhe23
subclass of: SO_0000673
so part of: bhlhe23
location: 4416428..4417363
location: region:4416428-4417363:1
so has part: feature:4416428-4417363:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4416428-4417363:1:exon

bhlhe23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: bhlhe23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class E basic helix-loop-helix protein 23
translation: MNVAEGDLFHSSAGISLKARDIVNDTFIERYAHSTFSYGGAVRGAETREGWVAGQSCGPYTLGHGATAAESSEDQTEDEEDSDGRSAGSARNAGSDTEGKLKSSGGKKGKEPRSLRLSINARERRRMHDLNDALDGLRSVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALDEMRRLVAYLNQGQTLSGPMPSAAALTNTLSTFGQAAVYPFTGNSLASCPDKCTVYTGTPSSLCKHCNDKS
SIO_010081: bhlhe23
subclass of: SO_0000673
so part of: bhlhe23
location: 4416585..4417316
location: region:4416585-4417316:1
so has part: feature:4416585-4417316:1:exon

XP_032897152.1
type: Protein
SIO_000068: ncbiprotein

position:4416585:1
position: 4416585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4417316:1
position: 4417316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4416585-4417316:1:exon

slc17a9
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: slc17a9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4513764..4552606)
location: region:4513764-4552606:-1
so has part: feature:4513764-4552606:-1:exon
subclass of: SO_0000010

116986165
type: Gene
SIO_000068: ncbigene

position:4513764:-1
position: 4513764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4552606:-1
position: 4552606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4513764-4552606:-1:exon

slc17a9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: slc17a9
product: solute carrier family 17 member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033041393.1
SIO_010081: slc17a9
subclass of: SO_0000673
so part of: slc17a9
location: complement(join(4513764..4514589,4516704..4516733,4518598..4518653,4520364..4520479,4520911..4520945,4522071..4522158,4523476..4523572,4527245..4527341,4527455..4527585,4530914..4531013,4543619..4543758,4547757..4547954,4552237..4552606))
location: region:4513764-4552606:-1
so has part: feature:4552237-4552606:-1:exon
so has part: feature:4547757-4547954:-1:exon
so has part: feature:4543619-4543758:-1:exon
so has part: feature:4530914-4531013:-1:exon
so has part: feature:4527455-4527585:-1:exon
so has part: feature:4527245-4527341:-1:exon
so has part: feature:4523476-4523572:-1:exon
so has part: feature:4522071-4522158:-1:exon
so has part: feature:4520911-4520945:-1:exon
so has part: feature:4520364-4520479:-1:exon
so has part: feature:4518598-4518653:-1:exon
so has part: feature:4516704-4516733:-1:exon
so has part: feature:4513764-4514589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4552237-4552606:-1:exon

position:4552237:-1
position: 4552237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4547757-4547954:-1:exon

position:4547757:-1
position: 4547757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4547954:-1
position: 4547954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4543619-4543758:-1:exon

position:4543619:-1
position: 4543619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4543758:-1
position: 4543758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4530914-4531013:-1:exon

position:4530914:-1
position: 4530914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4531013:-1
position: 4531013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4527455-4527585:-1:exon

position:4527455:-1
position: 4527455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4527585:-1
position: 4527585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4527245-4527341:-1:exon

position:4527245:-1
position: 4527245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4527341:-1
position: 4527341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4523476-4523572:-1:exon

position:4523476:-1
position: 4523476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4523572:-1
position: 4523572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4522071-4522158:-1:exon

position:4522071:-1
position: 4522071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4522158:-1
position: 4522158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4520911-4520945:-1:exon

position:4520911:-1
position: 4520911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4520945:-1
position: 4520945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4520364-4520479:-1:exon

position:4520364:-1
position: 4520364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4520479:-1
position: 4520479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4518598-4518653:-1:exon

position:4518598:-1
position: 4518598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4518653:-1
position: 4518653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4516704-4516733:-1:exon

position:4516704:-1
position: 4516704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4516733:-1
position: 4516733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4513764-4514589:-1:exon

position:4514589:-1
position: 4514589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

slc17a9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: slc17a9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 17 member 9
translation: MAFAAYNEGDKITSMNFIRPGDSPNEVPISRTHPNGTYWSKSEAKSWVPFLFMGTCLLYCARVTLPICVSAMAEQYEWDKKQSGLVLGSFFWGYCLTQILGGYISDRLGGAKILMLSTCAWGLVVIFTPIIVHQSSSPIVLLTASRFLMGLLQGVFYPSLTSLFSIKVRESDRAFTSSSVCTGSQVGTLLLGAVGSVLLHRYGWESVFYFSGLPSLLWGVCMWKYFLKGQDQIISLESLGNGLVNSKNSKVPWRKLFRSTAVWAVIVAHICLAGTFFCLLSWMPTFFHDLFPESKGWVFNVVPWAVAIPFSLFGGLLTDHLIKLGFDTAKVRKIMTVFAMGVSSIFTKLLSYSGNYYQAVIFLSVSLGLQTFNHSGVSVNVQDLAPSCAGSLFGIMNTGGALCGVAFVYLAGHLIETSGSWPSVFNFISIVNTFGLSFFLFFGQATRIDI
SIO_010081: slc17a9
subclass of: SO_0000673
so part of: slc17a9
location: complement(join(4514447..4514589,4516704..4516733,4518598..4518653,4520364..4520479,4520911..4520945,4522071..4522158,4523476..4523572,4527245..4527341,4527455..4527585,4530914..4531013,4543619..4543758,4547757..4547954,4552237..4552358))
location: region:4514447-4552358:-1
so has part: feature:4552237-4552358:-1:exon
so has part: feature:4547757-4547954:-1:exon
so has part: feature:4543619-4543758:-1:exon
so has part: feature:4530914-4531013:-1:exon
so has part: feature:4527455-4527585:-1:exon
so has part: feature:4527245-4527341:-1:exon
so has part: feature:4523476-4523572:-1:exon
so has part: feature:4522071-4522158:-1:exon
so has part: feature:4520911-4520945:-1:exon
so has part: feature:4520364-4520479:-1:exon
so has part: feature:4518598-4518653:-1:exon
so has part: feature:4516704-4516733:-1:exon
so has part: feature:4514447-4514589:-1:exon

XP_032897284.1
type: Protein
SIO_000068: ncbiprotein

position:4514447:-1
position: 4514447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4552358:-1
position: 4552358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4552237-4552358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4547757-4547954:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4543619-4543758:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4530914-4531013:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4527455-4527585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4527245-4527341:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4523476-4523572:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4522071-4522158:-1:exon