Amblyraja radiata isolate CabotCenter1 chromosome 20, sAmbRad1.1.pri, whole genome shotgun sequence.
type: Entry
definition: Amblyraja radiata isolate CabotCenter1 chromosome 20, sAmbRad1.1.pri, whole genome shotgun sequence.
sequence version: NC_045975.1
sequence date: 2021-04-05
sequence: sequence
division: CON
label: NC_045975.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA610638
dblink: SAMN09948523
keyword: WGS
keyword: RefSeq
source: Amblyraja radiata (thorny skate)
organism: Amblyraja radiata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Amblyraja.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021385.1.\nAssembly name: sAmbRad1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/21. The original whole-genome shotgun project has the\naccession JAAGWR000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 13-JAN-2020\nAssembly Method :: Canu v. 1.7; purge_haplotigs v. bitbucket\n 7.10.2018; scaff10x v. 4.1.0; Bionano\n Solve DLS v. 3.3; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes Illumina polishing v.\n 1.3.1; purge_dups v.\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n gEVAL manual curation v. 2020-01-13; VGP\n assembly pipeline v. 1.5\nAssembly Name :: sAmbRad1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 128.24x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Amblyraja radiata Updated Annotation\n Release 100.20210331\nAnnotation Version :: 100.20210331\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 46754034
topology: linear
so has quality: SO_0000987
location: 1..46754034
location: region:1-46754034:1
RO_0002162: 386614

NC_045975
type: RefSeq
SIO_000068: refseq

PRJNA610638
type: BioProject
SIO_000068: bioproject

SAMN09948523
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46754034:1
position: 46754034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-46754034:1:source
so part of: sequence
organism: Amblyraja radiata
mol type: genomic DNA
isolate: CabotCenter1
chromosome: 20
sex: male
tissue type: testis, liver
country: USA: Gulf of Main
lat lon: 43.1336 N 68.3266 W
collection date: 2017-09-18
collected by: Jeff Kneebone

386614
type: Taxonomy
SIO_000068: taxonomy

LOC116984885
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984885
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(39361..46504)
location: region:39361-46504:-1
so has part: feature:39361-46504:-1:exon

116984885
type: Gene
SIO_000068: ncbigene

position:39361:-1
position: 39361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46504:-1
position: 46504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39361-46504:-1:exon

LOC116984885
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116984885
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF02543
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116984885
subclass of: SO_0000673
so part of: LOC116984885
location: complement(39361..46504)
location: region:39361-46504:-1
so has part: feature:39361-46504:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39361-46504:-1:exon

LOC116984857
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984857
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(47752..47905)
location: region:47752-47905:-1
so has part: feature:47752-47905:-1:exon
subclass of: SO_0000573

116984857
type: Gene
SIO_000068: ncbigene

position:47752:-1
position: 47752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47905:-1
position: 47905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47752-47905:-1:exon

LOC116984857
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 386614
gene: LOC116984857
product: 5.8S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004415137.1
SIO_010081: LOC116984857
subclass of: SO_0000673
so part of: LOC116984857
location: complement(47752..47905)
location: region:47752-47905:-1
so has part: feature:47752-47905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47752-47905:-1:exon

LOC116984465
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984465
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 237236..244147
location: region:237236-244147:1
so has part: feature:237236-244147:1:exon
subclass of: SO_0000010

116984465
type: Gene
SIO_000068: ncbigene

position:237236:1
position: 237236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244147:1
position: 244147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237236-244147:1:exon

LOC116984465
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984465
product: dispanin subfamily A member 2b-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033038590.1
SIO_010081: LOC116984465
subclass of: SO_0000673
so part of: LOC116984465
location: join(237236..237497,243920..244147)
location: region:237236-244147:1
so has part: feature:237236-237497:1:exon
so has part: feature:243920-244147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237236-237497:1:exon

position:237497:1
position: 237497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:243920-244147:1:exon

position:243920:1
position: 243920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116984465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984465
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dispanin subfamily A member 2b-like
translation: METTEFASRPEAEEAMASRRPQQPMNTVVDMQGIVQPQQQSTPIKDHLIWSLFNAFYLNACCLGFLALIYSIKARDSKFVNNTRRARKFAAKAMGLNVAATLFSLTLLAAGLVYYLYVTVAQLTP
SIO_010081: LOC116984465
subclass of: SO_0000673
so part of: LOC116984465
location: join(237279..237497,243920..244078)
location: region:237279-244078:1
so has part: feature:237279-237497:1:exon
so has part: feature:243920-244078:1:exon

XP_032894481.1
type: Protein
SIO_000068: ncbiprotein

position:237279:1
position: 237279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244078:1
position: 244078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237279-237497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243920-244078:1:exon

LOC116984466
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 269930..282489
location: region:269930-282489:1
so has part: feature:269930-282489:1:exon
subclass of: SO_0000010

116984466
type: Gene
SIO_000068: ncbigene

position:269930:1
position: 269930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282489:1
position: 282489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269930-282489:1:exon

LOC116984466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984466
product: dispanin subfamily A member 2b-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_033038591.1
SIO_010081: LOC116984466
subclass of: SO_0000673
so part of: LOC116984466
location: join(269930..270222,281999..282489)
location: region:269930-282489:1
so has part: feature:269930-270222:1:exon
so has part: feature:281999-282489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:269930-270222:1:exon

position:270222:1
position: 270222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:281999-282489:1:exon

position:281999:1
position: 281999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116984466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dispanin subfamily A member 2b-like isoform X1
translation: MEYRSDQVPMTPRSVQTVSVAMPVRDHLPWSIFNLFYMNICCLGLTAMVFSVKSRDRKVVGDVEGALHYGSTARSLNIAATVLSILVFIIFIALAATGTIKAIKGT
SIO_010081: LOC116984466
subclass of: SO_0000673
so part of: LOC116984466
location: join(270064..270222,281999..282160)
location: region:270064-282160:1
so has part: feature:270064-270222:1:exon
so has part: feature:281999-282160:1:exon

XP_032894482.1
type: Protein
SIO_000068: ncbiprotein

position:270064:1
position: 270064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282160:1
position: 282160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270064-270222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:281999-282160:1:exon

LOC116984466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984466
product: dispanin subfamily A member 2b-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033038592.1
SIO_010081: LOC116984466
subclass of: SO_0000673
so part of: LOC116984466
location: join(276937..277068,281999..282489)
location: region:276937-282489:1
so has part: feature:276937-277068:1:exon
so has part: feature:281999-282489:1:exon

position:276937:1
position: 276937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276937-277068:1:exon

position:277068:1
position: 277068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:281999-282489:1:exon

LOC116984466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dispanin subfamily A member 2b-like isoform X2
translation: MSSSMSGSTLANPGRDYLPWSLFSLSYMNCCCLGLVAAIYSVKSRDRKVVGDVEGALHYGSTARSLNIAATVLSILVFIIFIALAATGTIKAIKGT
SIO_010081: LOC116984466
subclass of: SO_0000673
so part of: LOC116984466
location: join(276940..277068,281999..282160)
location: region:276940-282160:1
so has part: feature:276940-277068:1:exon
so has part: feature:281999-282160:1:exon

XP_032894483.1
type: Protein
SIO_000068: ncbiprotein

position:276940:1
position: 276940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276940-277068:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:281999-282160:1:exon

LOC116984467
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 299810..303867
location: region:299810-303867:1
so has part: feature:299810-303867:1:exon
subclass of: SO_0000010

116984467
type: Gene
SIO_000068: ncbigene

position:299810:1
position: 299810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303867:1
position: 303867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299810-303867:1:exon

LOC116984467
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984467
product: dispanin subfamily A member 2b-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033038593.1
SIO_010081: LOC116984467
subclass of: SO_0000673
so part of: LOC116984467
location: join(299810..300185,303512..303867)
location: region:299810-303867:1
so has part: feature:299810-300185:1:exon
so has part: feature:303512-303867:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299810-300185:1:exon

position:300185:1
position: 300185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:303512-303867:1:exon

position:303512:1
position: 303512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116984467
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dispanin subfamily A member 2b-like
translation: MVTIAKGAWLQEQLGSAISLAAAPPTDSELSATELRDMESVADEVCMNSRAFTYKELKDEQPVPVPVPVVVPVLAAPVRDHLPWSLFNLAYMNCCCMGLIATIYSVKSRDRKFLGDVEGGLHYGSTARSFNIAATTLSILVILIMIVYVLVGVLSL
SIO_010081: LOC116984467
subclass of: SO_0000673
so part of: LOC116984467
location: join(299865..300185,303512..303661)
location: region:299865-303661:1
so has part: feature:299865-300185:1:exon
so has part: feature:303512-303661:1:exon

XP_032894484.1
type: Protein
SIO_000068: ncbiprotein

position:299865:1
position: 299865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303661:1
position: 303661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299865-300185:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303512-303661:1:exon

LOC116984377
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(318937..327678)
location: region:318937-327678:-1
so has part: feature:318937-327678:-1:exon
subclass of: SO_0000010

116984377
type: Gene
SIO_000068: ncbigene

position:318937:-1
position: 318937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327678:-1
position: 327678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318937-327678:-1:exon

LOC116984377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984377
product: tetra-peptide repeat homeobox protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033038535.1
SIO_010081: LOC116984377
subclass of: SO_0000673
so part of: LOC116984377
location: complement(join(318937..319883,327094..327678))
location: region:318937-327678:-1
so has part: feature:327094-327678:-1:exon
so has part: feature:318937-319883:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:327094-327678:-1:exon

position:327094:-1
position: 327094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318937-319883:-1:exon

position:319883:-1
position: 319883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116984377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetra-peptide repeat homeobox protein 1-like
translation: MSAPVQQVCAALPEYAEIENSNQAAEMPPHPAMAMGPCPGMAMGPCPGMPMAPGPGMVMGPGPGMVMAPGPGMVMGPGPGMPMAPGPGMPMAPGPGMPMAPGPGMVMAPGPGMVMGPGPGMVMAPGPGMVMAPGPGMVMAPGPGMVMAPGPGMVMAPGVTLQQVHTRDFLVWSIFNILHMNVFCLGFIAVAFSVKARDRRFVGDQNGAKHYGNTAKHLNIAATVLTAIVYLILIILAFFGAFTAAYYG
SIO_010081: LOC116984377
subclass of: SO_0000673
so part of: LOC116984377
location: complement(join(319722..319883,327094..327678))
location: region:319722-327678:-1
so has part: feature:327094-327678:-1:exon
so has part: feature:319722-319883:-1:exon

XP_032894426.1
type: Protein
SIO_000068: ncbiprotein

position:319722:-1
position: 319722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327094-327678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319722-319883:-1:exon

LOC116984476
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984476
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 345134..349366
location: region:345134-349366:1
so has part: feature:345134-349366:1:exon
subclass of: SO_0000011

116984476
type: Gene
SIO_000068: ncbigene

position:345134:1
position: 345134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349366:1
position: 349366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345134-349366:1:exon

LOC116984476
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116984476
product: uncharacterized LOC116984476
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004415040.1
SIO_010081: LOC116984476
subclass of: SO_0000673
so part of: LOC116984476
location: join(345134..345144,346174..346178,349330..349366)
location: region:345134-349366:1
so has part: feature:345134-345144:1:exon
so has part: feature:346174-346178:1:exon
so has part: feature:349330-349366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:345134-345144:1:exon

position:345144:1
position: 345144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:346174-346178:1:exon

position:346174:1
position: 346174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346178:1
position: 346178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:349330-349366:1:exon

position:349330:1
position: 349330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116984470
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984470
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 372991..390718
location: region:372991-390718:1
so has part: feature:372991-390718:1:exon
subclass of: SO_0000010

116984470
type: Gene
SIO_000068: ncbigene

position:372991:1
position: 372991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390718:1
position: 390718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372991-390718:1:exon

LOC116984470
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984470
product: uncharacterized oxidoreductase YjmC-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033038596.1
SIO_010081: LOC116984470
subclass of: SO_0000673
so part of: LOC116984470
location: join(372991..373162,376932..377080,377905..378093,378503..378564,378659..378712,379760..379858,381889..382024,385469..385587,388237..388332,388869..388979,389477..389849)
location: region:372991-389849:1
so has part: feature:372991-373162:1:exon
so has part: feature:376932-377080:1:exon
so has part: feature:377905-378093:1:exon
so has part: feature:378503-378564:1:exon
so has part: feature:378659-378712:1:exon
so has part: feature:379760-379858:1:exon
so has part: feature:381889-382024:1:exon
so has part: feature:385469-385587:1:exon
so has part: feature:388237-388332:1:exon
so has part: feature:388869-388979:1:exon
so has part: feature:389477-389849:1:exon

position:389849:1
position: 389849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372991-373162:1:exon

position:373162:1
position: 373162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376932-377080:1:exon

position:376932:1
position: 376932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377080:1
position: 377080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:377905-378093:1:exon

position:377905:1
position: 377905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378093:1
position: 378093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:378503-378564:1:exon

position:378503:1
position: 378503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378564:1
position: 378564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:378659-378712:1:exon

position:378659:1
position: 378659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378712:1
position: 378712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:379760-379858:1:exon

position:379760:1
position: 379760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379858:1
position: 379858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:381889-382024:1:exon

position:381889:1
position: 381889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382024:1
position: 382024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:385469-385587:1:exon

position:385469:1
position: 385469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385587:1
position: 385587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:388237-388332:1:exon

position:388237:1
position: 388237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388332:1
position: 388332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:388869-388979:1:exon

position:388869:1
position: 388869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388979:1
position: 388979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:389477-389849:1:exon

position:389477:1
position: 389477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116984470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984470
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized oxidoreductase YjmC-like isoform X1
translation: MRCQYPPGQLENVQGPRKLTNTDPYGAIMRYLVTRHDLHQFIECCMSAVGARSCHGAALADVLVEGDYRGHYSHGLNRLDMYVKDLKTGICAKDGDPTIVKCTAATALVNGNNLIGPIVGNFCMELAIKKAKQVGIGWVSAYGSNHFGIAGFYSMQALKCGLIGMSCTNTSPLVVPTRGKECTLGTNPISVAAPALDGDSFVLDMATSAVALGKIEFQHRRGEEVPVGWGCDPDGKDTTDPAKILSGGGLLPLGGNEATSGYKGYGLSMMVEIFCGILAGGHYSKNVRRWKETDSVADLGQSFFALDPECFAPGFESRMSDLLKLHRNLEPSEPGLGVLVPGDPEQQHMAECDRHGAIPYHVNVVDHMNSMARELGVEPLPTTRTIDP
SIO_010081: LOC116984470
subclass of: SO_0000673
so part of: LOC116984470
location: join(373074..373162,376932..377080,377905..378093,378503..378564,378659..378712,379760..379858,381889..382024,385469..385587,388237..388332,388869..388979,389477..389539)
location: region:373074-389539:1
so has part: feature:373074-373162:1:exon
so has part: feature:376932-377080:1:exon
so has part: feature:377905-378093:1:exon
so has part: feature:378503-378564:1:exon
so has part: feature:378659-378712:1:exon
so has part: feature:379760-379858:1:exon
so has part: feature:381889-382024:1:exon
so has part: feature:385469-385587:1:exon
so has part: feature:388237-388332:1:exon
so has part: feature:388869-388979:1:exon
so has part: feature:389477-389539:1:exon

XP_032894487.1
type: Protein
SIO_000068: ncbiprotein

position:373074:1
position: 373074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389539:1
position: 389539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373074-373162:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376932-377080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377905-378093:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:378503-378564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:378659-378712:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379760-379858:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:381889-382024:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385469-385587:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388237-388332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:388869-388979:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389477-389539:1:exon

LOC116984470
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984470
product: uncharacterized oxidoreductase YjmC-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033038597.1
SIO_010081: LOC116984470
subclass of: SO_0000673
so part of: LOC116984470
location: join(375329..375377,376932..377080,377905..378093,378503..378564,378659..378712,379760..379858,381889..382024,385469..385587,388237..388332,388869..388979,389477..390718)
location: region:375329-390718:1
so has part: feature:375329-375377:1:exon
so has part: feature:376932-377080:1:exon
so has part: feature:377905-378093:1:exon
so has part: feature:378503-378564:1:exon
so has part: feature:378659-378712:1:exon
so has part: feature:379760-379858:1:exon
so has part: feature:381889-382024:1:exon
so has part: feature:385469-385587:1:exon
so has part: feature:388237-388332:1:exon
so has part: feature:388869-388979:1:exon
so has part: feature:389477-390718:1:exon

position:375329:1
position: 375329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375329-375377:1:exon

position:375377:1
position: 375377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376932-377080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377905-378093:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:378503-378564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:378659-378712:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379760-379858:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:381889-382024:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385469-385587:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388237-388332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:388869-388979:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389477-390718:1:exon

LOC116984470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984470
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized oxidoreductase YjmC-like isoform X2
translation: MVRYLVTRHDLHQFIECCMSAVGARSCHGAALADVLVEGDYRGHYSHGLNRLDMYVKDLKTGICAKDGDPTIVKCTAATALVNGNNLIGPIVGNFCMELAIKKAKQVGIGWVSAYGSNHFGIAGFYSMQALKCGLIGMSCTNTSPLVVPTRGKECTLGTNPISVAAPALDGDSFVLDMATSAVALGKIEFQHRRGEEVPVGWGCDPDGKDTTDPAKILSGGGLLPLGGNEATSGYKGYGLSMMVEIFCGILAGGHYSKNVRRWKETDSVADLGQSFFALDPECFAPGFESRMSDLLKLHRNLEPSEPGLGVLVPGDPEQQHMAECDRHGAIPYHVNVVDHMNSMARELGVEPLPTTRTIDP
SIO_010081: LOC116984470
subclass of: SO_0000673
so part of: LOC116984470
location: join(375370..375377,376932..377080,377905..378093,378503..378564,378659..378712,379760..379858,381889..382024,385469..385587,388237..388332,388869..388979,389477..389539)
location: region:375370-389539:1
so has part: feature:375370-375377:1:exon
so has part: feature:376932-377080:1:exon
so has part: feature:377905-378093:1:exon
so has part: feature:378503-378564:1:exon
so has part: feature:378659-378712:1:exon
so has part: feature:379760-379858:1:exon
so has part: feature:381889-382024:1:exon
so has part: feature:385469-385587:1:exon
so has part: feature:388237-388332:1:exon
so has part: feature:388869-388979:1:exon
so has part: feature:389477-389539:1:exon

XP_032894488.1
type: Protein
SIO_000068: ncbiprotein

position:375370:1
position: 375370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375370-375377:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376932-377080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377905-378093:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:378503-378564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:378659-378712:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379760-379858:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:381889-382024:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385469-385587:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388237-388332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:388869-388979:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389477-389539:1:exon

psmd13
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: psmd13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(400851..411650)
location: region:400851-411650:-1
so has part: feature:400851-411650:-1:exon
subclass of: SO_0000010

116984471
type: Gene
SIO_000068: ncbigene

position:400851:-1
position: 400851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411650:-1
position: 411650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400851-411650:-1:exon

psmd13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: psmd13
product: proteasome 26S subunit, non-ATPase 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033038598.1
SIO_010081: psmd13
subclass of: SO_0000673
so part of: psmd13
location: complement(join(400851..401704,401975..402091,402332..402412,403469..403531,404519..404644,404802..404881,405151..405322,405977..406063,406145..406188,406757..406812,407735..407769,407858..407936,411503..411650))
location: region:400851-411650:-1
so has part: feature:411503-411650:-1:exon
so has part: feature:407858-407936:-1:exon
so has part: feature:407735-407769:-1:exon
so has part: feature:406757-406812:-1:exon
so has part: feature:406145-406188:-1:exon
so has part: feature:405977-406063:-1:exon
so has part: feature:405151-405322:-1:exon
so has part: feature:404802-404881:-1:exon
so has part: feature:404519-404644:-1:exon
so has part: feature:403469-403531:-1:exon
so has part: feature:402332-402412:-1:exon
so has part: feature:401975-402091:-1:exon
so has part: feature:400851-401704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:411503-411650:-1:exon

position:411503:-1
position: 411503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:407858-407936:-1:exon

position:407858:-1
position: 407858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407936:-1
position: 407936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:407735-407769:-1:exon

position:407735:-1
position: 407735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407769:-1
position: 407769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:406757-406812:-1:exon

position:406757:-1
position: 406757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406812:-1
position: 406812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:406145-406188:-1:exon

position:406145:-1
position: 406145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406188:-1
position: 406188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:405977-406063:-1:exon

position:405977:-1
position: 405977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406063:-1
position: 406063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:405151-405322:-1:exon

position:405151:-1
position: 405151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405322:-1
position: 405322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:404802-404881:-1:exon

position:404802:-1
position: 404802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404881:-1
position: 404881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:404519-404644:-1:exon

position:404519:-1
position: 404519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404644:-1
position: 404644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:403469-403531:-1:exon

position:403469:-1
position: 403469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403531:-1
position: 403531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:402332-402412:-1:exon

position:402332:-1
position: 402332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402412:-1
position: 402412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:401975-402091:-1:exon

position:401975:-1
position: 401975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402091:-1
position: 402091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:400851-401704:-1:exon

position:401704:-1
position: 401704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

psmd13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: psmd13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 13
translation: MRDVSAFLQQQQSSASAELGPHWHSMEELYNKKLWHQLTVELLTFVQDPCFATGDGLIKLYENFIGEFEHRINPLSLVEIVLHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLNVGDLPVTKKTIEEVDEMLTALPGITTVHGRFYDLSSKYYQIVGNYASYYRDALRFLGCIDIKDLPVAEHQERAFTLGLAGLLGEGVYNFGELLMHPVLESLRTTDKQWLIDTLFAFNSGNVDRFQALKTCWGQQPDLRANELRLMKKIQLLCLMEMTFTRPANHRQLSFQEISLIAKVPVTEVELLVMKALSVGLVRGSIDEVDERVHMTWVQPRVLDLQQIKGMKERLDCWCEDVKNVALLVEHQAQDILT
SIO_010081: psmd13
subclass of: SO_0000673
so part of: psmd13
location: complement(join(401609..401704,401975..402091,402332..402412,403469..403531,404519..404644,404802..404881,405151..405322,405977..406063,406145..406188,406757..406812,407735..407769,407858..407936,411503..411600))
location: region:401609-411600:-1
so has part: feature:411503-411600:-1:exon
so has part: feature:407858-407936:-1:exon
so has part: feature:407735-407769:-1:exon
so has part: feature:406757-406812:-1:exon
so has part: feature:406145-406188:-1:exon
so has part: feature:405977-406063:-1:exon
so has part: feature:405151-405322:-1:exon
so has part: feature:404802-404881:-1:exon
so has part: feature:404519-404644:-1:exon
so has part: feature:403469-403531:-1:exon
so has part: feature:402332-402412:-1:exon
so has part: feature:401975-402091:-1:exon
so has part: feature:401609-401704:-1:exon

XP_032894489.1
type: Protein
SIO_000068: ncbiprotein

position:401609:-1
position: 401609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411600:-1
position: 411600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411503-411600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407858-407936:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:407735-407769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:406757-406812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406145-406188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405977-406063:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405151-405322:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:404802-404881:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:404519-404644:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:403469-403531:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:402332-402412:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401975-402091:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401609-401704:-1:exon

sirt3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: sirt3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 411683..429546
location: region:411683-429546:1
so has part: feature:411683-429546:1:exon
subclass of: SO_0000010

116984472
type: Gene
SIO_000068: ncbigene

position:411683:1
position: 411683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429546:1
position: 429546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411683-429546:1:exon

sirt3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: sirt3
product: sirtuin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033038600.1
SIO_010081: sirt3
subclass of: SO_0000673
so part of: sirt3
location: join(411683..411780,413156..413311,426064..426296,426838..426938,427427..427588,428916..429128,429460..429546)
location: region:411683-429546:1
so has part: feature:411683-411780:1:exon
so has part: feature:413156-413311:1:exon
so has part: feature:426064-426296:1:exon
so has part: feature:426838-426938:1:exon
so has part: feature:427427-427588:1:exon
so has part: feature:428916-429128:1:exon
so has part: feature:429460-429546:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:411683-411780:1:exon

position:411780:1
position: 411780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:413156-413311:1:exon

position:413156:1
position: 413156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413311:1
position: 413311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:426064-426296:1:exon

position:426064:1
position: 426064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426296:1
position: 426296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:426838-426938:1:exon

position:426838:1
position: 426838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426938:1
position: 426938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:427427-427588:1:exon

position:427427:1
position: 427427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427588:1
position: 427588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:428916-429128:1:exon

position:428916:1
position: 428916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429128:1
position: 429128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:429460-429546:1:exon

position:429460:1
position: 429460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sirt3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: sirt3
product: sirtuin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033038599.1
SIO_010081: sirt3
subclass of: SO_0000673
so part of: sirt3
location: join(411685..411780,413156..413311,418781..418966,426064..426296,426838..426938,427427..427588,428916..429128,429460..429546)
location: region:411685-429546:1
so has part: feature:411685-411780:1:exon
so has part: feature:413156-413311:1:exon
so has part: feature:418781-418966:1:exon
so has part: feature:426064-426296:1:exon
so has part: feature:426838-426938:1:exon
so has part: feature:427427-427588:1:exon
so has part: feature:428916-429128:1:exon
so has part: feature:429460-429546:1:exon

position:411685:1
position: 411685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411685-411780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413156-413311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418781-418966:1:exon

position:418781:1
position: 418781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418966:1
position: 418966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:426064-426296:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426838-426938:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:427427-427588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:428916-429128:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:429460-429546:1:exon

sirt3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: sirt3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X1
translation: MHLVTCLRILCTALRRTASLQVQYTCSRCQHFQAEPVSETNAGRWSLRKTSRNCGVSCLPMLPPVRYMASGKSNREKVETLQDVARLILDGQCRQILVMAGAGISTPSGIPDFRSAGSGLYDSLRPLGLPYPEAVFDIQYFAHDPKPFFAVARRLCPGSWRPNYTHYFARLLHDKGLLLRLYTQNIDGLERRAGISPERLVEAHGTFATATCTACRQRYGWDQLRDEVLQGRVPLCPHCAGVVKPDIVFFGEELPLNFYRHLIDFPLADLLIILGTSLEVQPFASLSELVRRSVPRLLINQDAVGSLCRDPTRSSDVAELGDVVRGVKRFTDLLGWSGEVSQLLSREHHKLENVGEPPSH
SIO_010081: sirt3
subclass of: SO_0000673
so part of: sirt3
location: join(413157..413311,418781..418966,426064..426296,426838..426938,427427..427588,428916..429128,429460..429492)
location: region:413157-429492:1
so has part: feature:413157-413311:1:exon
so has part: feature:418781-418966:1:exon
so has part: feature:426064-426296:1:exon
so has part: feature:426838-426938:1:exon
so has part: feature:427427-427588:1:exon
so has part: feature:428916-429128:1:exon
so has part: feature:429460-429492:1:exon

XP_032894490.1
type: Protein
SIO_000068: ncbiprotein

position:413157:1
position: 413157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429492:1
position: 429492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413157-413311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418781-418966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:426064-426296:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426838-426938:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427427-427588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:428916-429128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429460-429492:1:exon

sirt3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: sirt3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X2
translation: MHLVTCLRILCTALRRTASLQVQYTCSRCQHFQAEPVSETNAGRWSLRKTSRSAGSGLYDSLRPLGLPYPEAVFDIQYFAHDPKPFFAVARRLCPGSWRPNYTHYFARLLHDKGLLLRLYTQNIDGLERRAGISPERLVEAHGTFATATCTACRQRYGWDQLRDEVLQGRVPLCPHCAGVVKPDIVFFGEELPLNFYRHLIDFPLADLLIILGTSLEVQPFASLSELVRRSVPRLLINQDAVGSLCRDPTRSSDVAELGDVVRGVKRFTDLLGWSGEVSQLLSREHHKLENVGEPPSH
SIO_010081: sirt3
subclass of: SO_0000673
so part of: sirt3
location: join(413157..413311,426064..426296,426838..426938,427427..427588,428916..429128,429460..429492)
location: region:413157-429492:1
so has part: feature:413157-413311:1:exon
so has part: feature:426064-426296:1:exon
so has part: feature:426838-426938:1:exon
so has part: feature:427427-427588:1:exon
so has part: feature:428916-429128:1:exon
so has part: feature:429460-429492:1:exon

XP_032894491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413157-413311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426064-426296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:426838-426938:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427427-427588:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:428916-429128:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:429460-429492:1:exon

LOC116984469
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(420728..441039)
location: region:420728-441039:-1
so has part: feature:420728-441039:-1:exon
subclass of: SO_0000010

116984469
type: Gene
SIO_000068: ncbigene

position:420728:-1
position: 420728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441039:-1
position: 441039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420728-441039:-1:exon

LOC116984469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984469
product: synembryn-A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033038594.1
SIO_010081: LOC116984469
subclass of: SO_0000673
so part of: LOC116984469
location: complement(join(420728..420860,429697..429825,430019..430132,430500..430641,431692..431836,432100..432195,434570..434720,434943..435037,435691..436470,438649..438696,440988..441039))
location: region:420728-441039:-1
so has part: feature:440988-441039:-1:exon
so has part: feature:438649-438696:-1:exon
so has part: feature:435691-436470:-1:exon
so has part: feature:434943-435037:-1:exon
so has part: feature:434570-434720:-1:exon
so has part: feature:432100-432195:-1:exon
so has part: feature:431692-431836:-1:exon
so has part: feature:430500-430641:-1:exon
so has part: feature:430019-430132:-1:exon
so has part: feature:429697-429825:-1:exon
so has part: feature:420728-420860:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440988-441039:-1:exon

position:440988:-1
position: 440988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:438649-438696:-1:exon

position:438649:-1
position: 438649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438696:-1
position: 438696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:435691-436470:-1:exon

position:435691:-1
position: 435691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436470:-1
position: 436470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:434943-435037:-1:exon

position:434943:-1
position: 434943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435037:-1
position: 435037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:434570-434720:-1:exon

position:434570:-1
position: 434570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434720:-1
position: 434720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:432100-432195:-1:exon

position:432100:-1
position: 432100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432195:-1
position: 432195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:431692-431836:-1:exon

position:431692:-1
position: 431692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431836:-1
position: 431836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:430500-430641:-1:exon

position:430500:-1
position: 430500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430641:-1
position: 430641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:430019-430132:-1:exon

position:430019:-1
position: 430019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430132:-1
position: 430132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:429697-429825:-1:exon

position:429697:-1
position: 429697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429825:-1
position: 429825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:420728-420860:-1:exon

position:420860:-1
position: 420860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116984469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984469
product: synembryn-A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033038595.1
SIO_010081: LOC116984469
subclass of: SO_0000673
so part of: LOC116984469
location: complement(join(420728..420860,429697..429825,430019..430132,430500..430641,431692..431836,432100..432195,434570..434720,434943..435037,435691..436470,438649..438696,440195..440577))
location: region:420728-440577:-1
so has part: feature:440195-440577:-1:exon
so has part: feature:438649-438696:-1:exon
so has part: feature:435691-436470:-1:exon
so has part: feature:434943-435037:-1:exon
so has part: feature:434570-434720:-1:exon
so has part: feature:432100-432195:-1:exon
so has part: feature:431692-431836:-1:exon
so has part: feature:430500-430641:-1:exon
so has part: feature:430019-430132:-1:exon
so has part: feature:429697-429825:-1:exon
so has part: feature:420728-420860:-1:exon

position:440577:-1
position: 440577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440195-440577:-1:exon

position:440195:-1
position: 440195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:438649-438696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435691-436470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434943-435037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434570-434720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432100-432195:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:431692-431836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:430500-430641:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:430019-430132:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429697-429825:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:420728-420860:-1:exon

LOC116984469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synembryn-A-like isoform X1
translation: MEATGRSFGPPESTAPNSQCFMFDVEGREQRRRLAVLVLGLLDRDPQPSCRLACLGCLRILSRDRHSLRPLSSAWAVRTLARAAGIDGGEEPGEYWRCPGEEREGPVQPEAEHERRGPVLERRGPVLERYGPGEMWTRPGEPEPGGERQGPQEVTGEEREGPGVEREALKVLCNLVLSCPEARAPCADNGLTLGLCRRARQIGPDPGASFLQLRLLFLLTALRLDERRRLGLELHGLPLLTDLLQRTLGLEGAAAPGPEHPTLARQPAERAMEILKILFNITVDLNRRQVDEEDAAQYRHLATILRHCLLTAAEGEERTEELQSHAVNLLVNLPLRYLDALLPARVPPGSAEYLGLNMDALQTLLCFLDTRLDRGQRLPEALNPVLLLLTTSARAHRETRKFLRMRVLPPLREVRTRPETGNSLRNKLVRLMTHVDTGLKLRVAELLFVLCKGSVPRLVKYTGYGNAAGLLAIRGLQDPRADSADSSDTDSDTEEFKDAQADINPVTGRIEGRSLPPPMSEEQKQREAQKLFMDLERLARGRIIQPLSLSADGRLRPLEAMLRPLGEERESGSESD
SIO_010081: LOC116984469
subclass of: SO_0000673
so part of: LOC116984469
location: complement(join(429714..429825,430019..430132,430500..430641,431692..431836,432100..432195,434570..434720,434943..435037,435691..436470,438649..438696,440988..441035))
location: region:429714-441035:-1
so has part: feature:440988-441035:-1:exon
so has part: feature:438649-438696:-1:exon
so has part: feature:435691-436470:-1:exon
so has part: feature:434943-435037:-1:exon
so has part: feature:434570-434720:-1:exon
so has part: feature:432100-432195:-1:exon
so has part: feature:431692-431836:-1:exon
so has part: feature:430500-430641:-1:exon
so has part: feature:430019-430132:-1:exon
so has part: feature:429714-429825:-1:exon

XP_032894485.1
type: Protein
SIO_000068: ncbiprotein

position:429714:-1
position: 429714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441035:-1
position: 441035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440988-441035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:438649-438696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435691-436470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434943-435037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434570-434720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432100-432195:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:431692-431836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:430500-430641:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:430019-430132:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429714-429825:-1:exon

LOC116984469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synembryn-A-like isoform X2
translation: MELNAALERLESGDQARALPALQRFISENSQCFMFDVEGREQRRRLAVLVLGLLDRDPQPSCRLACLGCLRILSRDRHSLRPLSSAWAVRTLARAAGIDGGEEPGEYWRCPGEEREGPVQPEAEHERRGPVLERRGPVLERYGPGEMWTRPGEPEPGGERQGPQEVTGEEREGPGVEREALKVLCNLVLSCPEARAPCADNGLTLGLCRRARQIGPDPGASFLQLRLLFLLTALRLDERRRLGLELHGLPLLTDLLQRTLGLEGAAAPGPEHPTLARQPAERAMEILKILFNITVDLNRRQVDEEDAAQYRHLATILRHCLLTAAEGEERTEELQSHAVNLLVNLPLRYLDALLPARVPPGSAEYLGLNMDALQTLLCFLDTRLDRGQRLPEALNPVLLLLTTSARAHRETRKFLRMRVLPPLREVRTRPETGNSLRNKLVRLMTHVDTGLKLRVAELLFVLCKGSVPRLVKYTGYGNAAGLLAIRGLQDPRADSADSSDTDSDTEEFKDAQADINPVTGRIEGRSLPPPMSEEQKQREAQKLFMDLERLARGRIIQPLSLSADGRLRPLEAMLRPLGEERESGSESD
SIO_010081: LOC116984469
subclass of: SO_0000673
so part of: LOC116984469
location: complement(join(429714..429825,430019..430132,430500..430641,431692..431836,432100..432195,434570..434720,434943..435037,435691..436470,438649..438696,440195..440278))
location: region:429714-440278:-1
so has part: feature:440195-440278:-1:exon
so has part: feature:438649-438696:-1:exon
so has part: feature:435691-436470:-1:exon
so has part: feature:434943-435037:-1:exon
so has part: feature:434570-434720:-1:exon
so has part: feature:432100-432195:-1:exon
so has part: feature:431692-431836:-1:exon
so has part: feature:430500-430641:-1:exon
so has part: feature:430019-430132:-1:exon
so has part: feature:429714-429825:-1:exon

XP_032894486.1
type: Protein
SIO_000068: ncbiprotein

position:440278:-1
position: 440278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440195-440278:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:438649-438696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435691-436470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:434943-435037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434570-434720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432100-432195:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:431692-431836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:430500-430641:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:430019-430132:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429714-429825:-1:exon

bet1l
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: bet1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 443071..462146
location: region:443071-462146:1
so has part: feature:443071-462146:1:exon
subclass of: SO_0000010

116984475
type: Gene
SIO_000068: ncbigene

position:443071:1
position: 443071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462146:1
position: 462146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443071-462146:1:exon

bet1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: bet1l
product: Bet1 golgi vesicular membrane trafficking protein like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033038603.1
SIO_010081: bet1l
subclass of: SO_0000673
so part of: bet1l
location: join(443071..443160,454699..454790,456446..456502,461427..462146)
location: region:443071-462146:1
so has part: feature:443071-443160:1:exon
so has part: feature:454699-454790:1:exon
so has part: feature:456446-456502:1:exon
so has part: feature:461427-462146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443071-443160:1:exon

position:443160:1
position: 443160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:454699-454790:1:exon

position:454699:1
position: 454699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454790:1
position: 454790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:456446-456502:1:exon

position:456446:1
position: 456446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456502:1
position: 456502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:461427-462146:1:exon

position:461427:1
position: 461427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bet1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: bet1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BET1-like protein
translation: MAERARGLGSGAADQFLDAENKRMAENLSSKVTRLKSIALDIDQEAADQNRYLDGMDSDFLSATGLLTGSVKRFSGMVRSGRDNRKLLCYTSLGLVLLFFILYYLLTRMHT
SIO_010081: bet1l
subclass of: SO_0000673
so part of: bet1l
location: join(443142..443160,454699..454790,456446..456502,461427..461594)
location: region:443142-461594:1
so has part: feature:443142-443160:1:exon
so has part: feature:454699-454790:1:exon
so has part: feature:456446-456502:1:exon
so has part: feature:461427-461594:1:exon

XP_032894494.1
type: Protein
SIO_000068: ncbiprotein

position:443142:1
position: 443142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461594:1
position: 461594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443142-443160:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:454699-454790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456446-456502:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461427-461594:1:exon

odf3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: odf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(456816..471882)
location: region:456816-471882:-1
so has part: feature:456816-471882:-1:exon
subclass of: SO_0000010

116984474
type: Gene
SIO_000068: ncbigene

position:456816:-1
position: 456816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471882:-1
position: 471882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456816-471882:-1:exon

odf3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: odf3
product: outer dense fiber of sperm tails 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033038602.1
SIO_010081: odf3
subclass of: SO_0000673
so part of: odf3
location: complement(join(456816..457066,465339..465479,466121..466242,469355..469456,469920..470123,471165..471293,471798..471882))
location: region:456816-471882:-1
so has part: feature:471798-471882:-1:exon
so has part: feature:471165-471293:-1:exon
so has part: feature:469920-470123:-1:exon
so has part: feature:469355-469456:-1:exon
so has part: feature:466121-466242:-1:exon
so has part: feature:465339-465479:-1:exon
so has part: feature:456816-457066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:471798-471882:-1:exon

position:471798:-1
position: 471798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:471165-471293:-1:exon

position:471165:-1
position: 471165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471293:-1
position: 471293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:469920-470123:-1:exon

position:469920:-1
position: 469920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470123:-1
position: 470123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:469355-469456:-1:exon

position:469355:-1
position: 469355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469456:-1
position: 469456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:466121-466242:-1:exon

position:466121:-1
position: 466121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466242:-1
position: 466242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:465339-465479:-1:exon

position:465339:-1
position: 465339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465479:-1
position: 465479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:456816-457066:-1:exon

position:457066:-1
position: 457066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

odf3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: odf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: outer dense fiber protein 3 isoform X2
translation: MSSGMWVGPWKPHRPRGPIAAFYSSPGPKYGLRGTTGYELHDATRFRSPSYSFGVPHARLTVDSSPGPAYLVPSLLTHRGRDGAPAYSLYGRPKDLKPFKTPGPGYYAPENSGKSAFTAAPAFSIASRTRGFRTDHSPGPAAYILPSVLGPNIVIKSSSANFSLSGRNKTGSFHEDFQKTPGPGAYRVTDTSVYKQKPPQFSMIGRNQLPGDSTRKPGPGSHSPEKPR
SIO_010081: odf3
subclass of: SO_0000673
so part of: odf3
location: complement(join(457058..457066,465339..465479,466121..466242,469355..469456,469920..470123,471165..471273))
location: region:457058-471273:-1
so has part: feature:471165-471273:-1:exon
so has part: feature:469920-470123:-1:exon
so has part: feature:469355-469456:-1:exon
so has part: feature:466121-466242:-1:exon
so has part: feature:465339-465479:-1:exon
so has part: feature:457058-457066:-1:exon

XP_032894493.1
type: Protein
SIO_000068: ncbiprotein

position:457058:-1
position: 457058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471273:-1
position: 471273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471165-471273:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:469920-470123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:469355-469456:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466121-466242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:465339-465479:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:457058-457066:-1:exon

odf3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: odf3
product: outer dense fiber of sperm tails 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033038601.1
SIO_010081: odf3
subclass of: SO_0000673
so part of: odf3
location: complement(join(464260..464437,465339..465479,466121..466242,469355..469456,469920..470123,471165..471293,471798..471882))
location: region:464260-471882:-1
so has part: feature:471798-471882:-1:exon
so has part: feature:471165-471293:-1:exon
so has part: feature:469920-470123:-1:exon
so has part: feature:469355-469456:-1:exon
so has part: feature:466121-466242:-1:exon
so has part: feature:465339-465479:-1:exon
so has part: feature:464260-464437:-1:exon

position:464260:-1
position: 464260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471798-471882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:471165-471293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:469920-470123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:469355-469456:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466121-466242:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:465339-465479:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:464260-464437:-1:exon

position:464437:-1
position: 464437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

odf3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: odf3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: outer dense fiber protein 3 isoform X1
translation: MSSGMWVGPWKPHRPRGPIAAFYSSPGPKYGLRGTTGYELHDATRFRSPSYSFGVPHARLTVDSSPGPAYLVPSLLTHRGRDGAPAYSLYGRPKDLKPFKTPGPGYYAPENSGKSAFTAAPAFSIASRTRGFRTDHSPGPAAYILPSVLGPNIVIKSSSANFSLSGRNKTGSFHEDFQKTPGPGAYRVTDTSVYKQKPPQFSMIGRNQLPGDSTRKPGPGSHSPEKVVVNRNVAPAFSFGIRHSEYVAPIIVDAV
SIO_010081: odf3
subclass of: SO_0000673
so part of: odf3
location: complement(join(464348..464437,465339..465479,466121..466242,469355..469456,469920..470123,471165..471273))
location: region:464348-471273:-1
so has part: feature:471165-471273:-1:exon
so has part: feature:469920-470123:-1:exon
so has part: feature:469355-469456:-1:exon
so has part: feature:466121-466242:-1:exon
so has part: feature:465339-465479:-1:exon
so has part: feature:464348-464437:-1:exon

XP_032894492.1
type: Protein
SIO_000068: ncbiprotein

position:464348:-1
position: 464348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471165-471273:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:469920-470123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:469355-469456:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466121-466242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:465339-465479:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:464348-464437:-1:exon

LOC116984477
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984477
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 473813..507305
location: region:473813-507305:1
so has part: feature:473813-507305:1:exon
subclass of: SO_0000010

116984477
type: Gene
SIO_000068: ncbigene

position:473813:1
position: 473813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507305:1
position: 507305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473813-507305:1:exon

LOC116984477
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984477
product: deformed epidermal autoregulatory factor 1 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033038604.1
SIO_010081: LOC116984477
subclass of: SO_0000673
so part of: LOC116984477
location: join(473813..473940,477569..477663,484062..484191,484455..484601,485983..486122,487779..487844,490604..490730,491809..491937,495560..495812,497523..497594,503868..503957,506792..507305)
location: region:473813-507305:1
so has part: feature:473813-473940:1:exon
so has part: feature:477569-477663:1:exon
so has part: feature:484062-484191:1:exon
so has part: feature:484455-484601:1:exon
so has part: feature:485983-486122:1:exon
so has part: feature:487779-487844:1:exon
so has part: feature:490604-490730:1:exon
so has part: feature:491809-491937:1:exon
so has part: feature:495560-495812:1:exon
so has part: feature:497523-497594:1:exon
so has part: feature:503868-503957:1:exon
so has part: feature:506792-507305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:473813-473940:1:exon

position:473940:1
position: 473940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:477569-477663:1:exon

position:477569:1
position: 477569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477663:1
position: 477663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:484062-484191:1:exon

position:484062:1
position: 484062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484191:1
position: 484191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:484455-484601:1:exon

position:484455:1
position: 484455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484601:1
position: 484601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:485983-486122:1:exon

position:485983:1
position: 485983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486122:1
position: 486122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:487779-487844:1:exon

position:487779:1
position: 487779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487844:1
position: 487844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:490604-490730:1:exon

position:490604:1
position: 490604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490730:1
position: 490730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:491809-491937:1:exon

position:491809:1
position: 491809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491937:1
position: 491937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:495560-495812:1:exon

position:495560:1
position: 495560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495812:1
position: 495812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:497523-497594:1:exon

position:497523:1
position: 497523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497594:1
position: 497594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:503868-503957:1:exon

position:503868:1
position: 503868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503957:1
position: 503957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:506792-507305:1:exon

position:506792:1
position: 506792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116984477
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984477
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: deformed epidermal autoregulatory factor 1 homolog
translation: METKGLGMEAPEVTAVSVMAEEQIAMAEQLPSADEGGFADVTTVTVGSMTGAADNVFTTSVANASISEHVLSGRTTLQIGEGLPTDKATLIVVHTDGSIVETTGLKTPNAPITQGPQTPSTPLTPGPDKDGTKYNWDPSVYENELPVRCRNTSGILFKNKLGSGGRGRCVKHGENWFTPTEFEGMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAASCTCAACCDDMSLTGPVRLFVPYKRRKKENEQSTTPVKKESPKNITLLPAATATAFTMTPAGQITPSGTLAFERSSTTDATAIIADGAAQGDVFTNTTVLASLPALAVDPTNAHQVILPSALAGLEVVEQRSWLYLEEMVNSLLATTQQLKTLIEQVKHASLASKDGAIAQAKLQADTERKGSLYQNQLPFHSTDDVDEKTEIIIKQTCVNCGREAMNECTGCHKVHYCSTFCQRKDWKDHQHVCGQPTTLTMQAEEVQVSEVDVVKVKV
SIO_010081: LOC116984477
subclass of: SO_0000673
so part of: LOC116984477
location: join(473823..473940,477569..477663,484062..484191,484455..484601,485983..486122,487779..487844,490604..490730,491809..491937,495560..495812,497523..497594,503868..503957,506792..506896)
location: region:473823-506896:1
so has part: feature:473823-473940:1:exon
so has part: feature:477569-477663:1:exon
so has part: feature:484062-484191:1:exon
so has part: feature:484455-484601:1:exon
so has part: feature:485983-486122:1:exon
so has part: feature:487779-487844:1:exon
so has part: feature:490604-490730:1:exon
so has part: feature:491809-491937:1:exon
so has part: feature:495560-495812:1:exon
so has part: feature:497523-497594:1:exon
so has part: feature:503868-503957:1:exon
so has part: feature:506792-506896:1:exon

XP_032894495.1
type: Protein
SIO_000068: ncbiprotein

position:473823:1
position: 473823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506896:1
position: 506896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473823-473940:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477569-477663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:484062-484191:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:484455-484601:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485983-486122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487779-487844:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:490604-490730:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:491809-491937:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495560-495812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:497523-497594:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:503868-503957:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:506792-506896:1:exon

LOC116984478
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984478
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(512867..520788)
location: region:512867-520788:-1
so has part: feature:512867-520788:-1:exon
subclass of: SO_0000010

116984478
type: Gene
SIO_000068: ncbigene

position:512867:-1
position: 512867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520788:-1
position: 520788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512867-520788:-1:exon

LOC116984478
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984478
product: D(4) dopamine receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033038605.1
SIO_010081: LOC116984478
subclass of: SO_0000673
so part of: LOC116984478
location: complement(join(512867..513092,517710..518260,519461..519573,520331..520788))
location: region:512867-520788:-1
so has part: feature:520331-520788:-1:exon
so has part: feature:519461-519573:-1:exon
so has part: feature:517710-518260:-1:exon
so has part: feature:512867-513092:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:520331-520788:-1:exon

position:520331:-1
position: 520331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:519461-519573:-1:exon

position:519461:-1
position: 519461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519573:-1
position: 519573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:517710-518260:-1:exon

position:517710:-1
position: 517710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518260:-1
position: 518260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:512867-513092:-1:exon

position:513092:-1
position: 513092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116984478
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984478
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D(4) dopamine receptor-like
translation: MNNGSGGETAGGQTATSEMAGGQTTGGPPLPALHIPALVLGGLLIVLIIAGNLLVCLGVATERPLRTATNIFIASLATSDLLLAVLVLPLYVFQEFQGGVWTLGPGVCDYLMTMDVMLCTASIFNLCAISVDRFIAVRIPLNYSRTHIDVRQVALISLTWILALAVASPIALGLNQVPGRDISVCRLEDNSYIIWSSVCSFLLPCPVMLLLYCAVLRGLQRWEASRNRARKLRRHPHGFRKMEGSPSDREPEPEREREREGEREKERERVQEPRPEPEPPRLATRPAMYAQPGPGSRKVRISGREHKAMTVLPVVLGAFLLCWTPFFVVHILKASCNTCHVSPQLISTVTWLGYVNSALNPFIYTFFNKEFRNYFRKVLYPCR
SIO_010081: LOC116984478
subclass of: SO_0000673
so part of: LOC116984478
location: complement(join(512890..513092,517710..518260,519461..519573,520331..520615))
location: region:512890-520615:-1
so has part: feature:520331-520615:-1:exon
so has part: feature:519461-519573:-1:exon
so has part: feature:517710-518260:-1:exon
so has part: feature:512890-513092:-1:exon

XP_032894496.1
type: Protein
SIO_000068: ncbiprotein

position:512890:-1
position: 512890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520615:-1
position: 520615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520331-520615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519461-519573:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517710-518260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512890-513092:-1:exon

LOC116984479
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984479
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 534818..542373
location: region:534818-542373:1
so has part: feature:534818-542373:1:exon
subclass of: SO_0000010

116984479
type: Gene
SIO_000068: ncbigene

position:534818:1
position: 534818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542373:1
position: 542373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534818-542373:1:exon

LOC116984479
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984479
product: dispanin subfamily A member 2b-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033038606.1
SIO_010081: LOC116984479
subclass of: SO_0000673
so part of: LOC116984479
location: join(534818..535024,540151..540267,542023..542373)
location: region:534818-542373:1
so has part: feature:534818-535024:1:exon
so has part: feature:540151-540267:1:exon
so has part: feature:542023-542373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534818-535024:1:exon

position:535024:1
position: 535024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:540151-540267:1:exon

position:540151:1
position: 540151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540267:1
position: 540267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:542023-542373:1:exon

position:542023:1
position: 542023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116984479
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984479
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dispanin subfamily A member 2b-like
translation: MESRMNQALVENDQLSPGRGRCSEIPATMVHIATEPLPVKDHFLWSMFSFVYCNFCCLGFMALAFSVKARDRKMLGDIYSASHYGATSKALNLAATLLTIAWVITMVALVISGVIQLRPR
SIO_010081: LOC116984479
subclass of: SO_0000673
so part of: LOC116984479
location: join(534938..535024,540151..540267,542023..542181)
location: region:534938-542181:1
so has part: feature:534938-535024:1:exon
so has part: feature:540151-540267:1:exon
so has part: feature:542023-542181:1:exon

XP_032894497.1
type: Protein
SIO_000068: ncbiprotein

position:534938:1
position: 534938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542181:1
position: 542181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534938-535024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540151-540267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:542023-542181:1:exon

LOC116984378
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(591778..603648)
location: region:591778-603648:-1
so has part: feature:591778-603648:-1:exon
subclass of: SO_0000010

116984378
type: Gene
SIO_000068: ncbigene

position:591778:-1
position: 591778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603648:-1
position: 603648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591778-603648:-1:exon

LOC116984378
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984378
product: interferon regulatory factor 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033038536.1
SIO_010081: LOC116984378
subclass of: SO_0000673
so part of: LOC116984378
location: complement(join(591778..592185,592559..592671,593574..593978,594402..594584,598339..598399,599114..599199,600110..600296,603289..603648))
location: region:591778-603648:-1
so has part: feature:603289-603648:-1:exon
so has part: feature:600110-600296:-1:exon
so has part: feature:599114-599199:-1:exon
so has part: feature:598339-598399:-1:exon
so has part: feature:594402-594584:-1:exon
so has part: feature:593574-593978:-1:exon
so has part: feature:592559-592671:-1:exon
so has part: feature:591778-592185:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:603289-603648:-1:exon

position:603289:-1
position: 603289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:600110-600296:-1:exon

position:600110:-1
position: 600110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600296:-1
position: 600296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:599114-599199:-1:exon

position:599114:-1
position: 599114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599199:-1
position: 599199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:598339-598399:-1:exon

position:598339:-1
position: 598339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598399:-1
position: 598399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:594402-594584:-1:exon

position:594402:-1
position: 594402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594584:-1
position: 594584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:593574-593978:-1:exon

position:593574:-1
position: 593574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593978:-1
position: 593978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:592559-592671:-1:exon

position:592559:-1
position: 592559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592671:-1
position: 592671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:591778-592185:-1:exon

position:592185:-1
position: 592185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116984378
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon regulatory factor 3-like
translation: MNNNRPQLRPWLIAQVDSGHFPGLRWVNGRRNMFRIPWKHASRQDLTQDDYRIFRDWAIASGRFNGQDADDPPKWKTNFRCALNSNESFRMLTDLSKESTDPHKVYCIMDLNPEPPPDGAMGVDEELESILHLSPETEPTLPGFPPLPVDEVMPHFGSMSLSDSPSGPSGTDPCLSLLERCWPLPGGGACGEGGFSQQGPVYPPAALHPPAADANLPPWAPVLINGQEPSDLDITVYYRGRQVLHCTVTNPGGCRLYSRQEEPALSQLQPVRLPPTDCLPDIKQRGFTERLLASVEGGLLLHHWAGDVLAERLGRCQVFWARSESGPELELEPGAAAGPDGGAIKLNRNQRTHILCLRDFVRELRAFMEHRGGAPNCAAYLCFGQQFLRSNKNKKLILVKVVPLAWVALTEMAQQGGASSLDSDNVSLHISSTASLDSLLALLREVEDMELDL
SIO_010081: LOC116984378
subclass of: SO_0000673
so part of: LOC116984378
location: complement(join(592024..592185,592559..592671,593574..593978,594402..594584,598339..598399,599114..599199,600110..600296,603289..603453))
location: region:592024-603453:-1
so has part: feature:603289-603453:-1:exon
so has part: feature:600110-600296:-1:exon
so has part: feature:599114-599199:-1:exon
so has part: feature:598339-598399:-1:exon
so has part: feature:594402-594584:-1:exon
so has part: feature:593574-593978:-1:exon
so has part: feature:592559-592671:-1:exon
so has part: feature:592024-592185:-1:exon

XP_032894427.1
type: Protein
SIO_000068: ncbiprotein

position:592024:-1
position: 592024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603453:-1
position: 603453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603289-603453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:600110-600296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:599114-599199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598339-598399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:594402-594584:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593574-593978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:592559-592671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:592024-592185:-1:exon

LOC116984480
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(613121..683273)
location: region:613121-683273:-1
so has part: feature:613121-683273:-1:exon
subclass of: SO_0000010

116984480
type: Gene
SIO_000068: ncbigene

position:613121:-1
position: 613121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683273:-1
position: 683273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613121-683273:-1:exon

LOC116984480
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984480
product: PHD and RING finger domain-containing protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033038608.1
SIO_010081: LOC116984480
subclass of: SO_0000673
so part of: LOC116984480
location: complement(join(613121..613899,614749..614877,619640..619945,621045..621202,625184..628789,632350..632501,633809..633937,634223..634410,634498..634631,635122..635260,636762..636943,638751..638842,654421..654542,661235..661318,664115..664311,670222..670368,673088..673205,679034..679127,683115..683273))
location: region:613121-683273:-1
so has part: feature:683115-683273:-1:exon
so has part: feature:679034-679127:-1:exon
so has part: feature:673088-673205:-1:exon
so has part: feature:670222-670368:-1:exon
so has part: feature:664115-664311:-1:exon
so has part: feature:661235-661318:-1:exon
so has part: feature:654421-654542:-1:exon
so has part: feature:638751-638842:-1:exon
so has part: feature:636762-636943:-1:exon
so has part: feature:635122-635260:-1:exon
so has part: feature:634498-634631:-1:exon
so has part: feature:634223-634410:-1:exon
so has part: feature:633809-633937:-1:exon
so has part: feature:632350-632501:-1:exon
so has part: feature:625184-628789:-1:exon
so has part: feature:621045-621202:-1:exon
so has part: feature:619640-619945:-1:exon
so has part: feature:614749-614877:-1:exon
so has part: feature:613121-613899:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683115-683273:-1:exon

position:683115:-1
position: 683115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:679034-679127:-1:exon

position:679034:-1
position: 679034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679127:-1
position: 679127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:673088-673205:-1:exon

position:673088:-1
position: 673088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673205:-1
position: 673205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:670222-670368:-1:exon

position:670222:-1
position: 670222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670368:-1
position: 670368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:664115-664311:-1:exon

position:664115:-1
position: 664115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664311:-1
position: 664311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:661235-661318:-1:exon

position:661235:-1
position: 661235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661318:-1
position: 661318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:654421-654542:-1:exon

position:654421:-1
position: 654421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654542:-1
position: 654542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:638751-638842:-1:exon

position:638751:-1
position: 638751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638842:-1
position: 638842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:636762-636943:-1:exon

position:636762:-1
position: 636762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636943:-1
position: 636943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:635122-635260:-1:exon

position:635122:-1
position: 635122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635260:-1
position: 635260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:634498-634631:-1:exon

position:634498:-1
position: 634498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634631:-1
position: 634631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:634223-634410:-1:exon

position:634223:-1
position: 634223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634410:-1
position: 634410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:633809-633937:-1:exon

position:633809:-1
position: 633809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633937:-1
position: 633937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:632350-632501:-1:exon

position:632350:-1
position: 632350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632501:-1
position: 632501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:625184-628789:-1:exon

position:625184:-1
position: 625184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628789:-1
position: 628789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:621045-621202:-1:exon

position:621045:-1
position: 621045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621202:-1
position: 621202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:619640-619945:-1:exon

position:619640:-1
position: 619640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619945:-1
position: 619945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:614749-614877:-1:exon

position:614749:-1
position: 614749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614877:-1
position: 614877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:613121-613899:-1:exon

position:613899:-1
position: 613899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116984480
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984480
product: PHD and RING finger domain-containing protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033038609.1
SIO_010081: LOC116984480
subclass of: SO_0000673
so part of: LOC116984480
location: complement(join(613121..613899,614749..614877,619640..619945,621045..621202,625184..625697,625896..628789,632350..632501,633809..633937,634223..634410,634498..634631,635122..635260,636762..636943,638751..638842,654421..654542,661235..661318,664115..664311,670222..670368,673088..673205,683115..683243))
location: region:613121-683243:-1
so has part: feature:683115-683243:-1:exon
so has part: feature:673088-673205:-1:exon
so has part: feature:670222-670368:-1:exon
so has part: feature:664115-664311:-1:exon
so has part: feature:661235-661318:-1:exon
so has part: feature:654421-654542:-1:exon
so has part: feature:638751-638842:-1:exon
so has part: feature:636762-636943:-1:exon
so has part: feature:635122-635260:-1:exon
so has part: feature:634498-634631:-1:exon
so has part: feature:634223-634410:-1:exon
so has part: feature:633809-633937:-1:exon
so has part: feature:632350-632501:-1:exon
so has part: feature:625896-628789:-1:exon
so has part: feature:625184-625697:-1:exon
so has part: feature:621045-621202:-1:exon
so has part: feature:619640-619945:-1:exon
so has part: feature:614749-614877:-1:exon
so has part: feature:613121-613899:-1:exon

position:683243:-1
position: 683243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683115-683243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:673088-673205:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:670222-670368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:664115-664311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661235-661318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654421-654542:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:638751-638842:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636762-636943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:635122-635260:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:634498-634631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634223-634410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:633809-633937:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:632350-632501:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:625896-628789:-1:exon

position:625896:-1
position: 625896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:625184-625697:-1:exon

position:625697:-1
position: 625697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:621045-621202:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:619640-619945:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:614749-614877:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:613121-613899:-1:exon

LOC116984480
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984480
product: PHD and RING finger domain-containing protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033038607.1
SIO_010081: LOC116984480
subclass of: SO_0000673
so part of: LOC116984480
location: complement(join(613121..613899,614749..614877,619640..619945,621045..621202,625184..628789,632350..632501,633809..633937,634223..634410,634498..634631,635122..635260,636762..636943,638751..638842,654421..654542,661235..661318,664115..664311,670222..670368,673088..673205,683115..683243))
location: region:613121-683243:-1
so has part: feature:683115-683243:-1:exon
so has part: feature:673088-673205:-1:exon
so has part: feature:670222-670368:-1:exon
so has part: feature:664115-664311:-1:exon
so has part: feature:661235-661318:-1:exon
so has part: feature:654421-654542:-1:exon
so has part: feature:638751-638842:-1:exon
so has part: feature:636762-636943:-1:exon
so has part: feature:635122-635260:-1:exon
so has part: feature:634498-634631:-1:exon
so has part: feature:634223-634410:-1:exon
so has part: feature:633809-633937:-1:exon
so has part: feature:632350-632501:-1:exon
so has part: feature:625184-628789:-1:exon
so has part: feature:621045-621202:-1:exon
so has part: feature:619640-619945:-1:exon
so has part: feature:614749-614877:-1:exon
so has part: feature:613121-613899:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683115-683243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:673088-673205:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:670222-670368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:664115-664311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661235-661318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654421-654542:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:638751-638842:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636762-636943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:635122-635260:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:634498-634631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634223-634410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:633809-633937:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:632350-632501:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:625184-628789:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:621045-621202:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:619640-619945:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614749-614877:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:613121-613899:-1:exon

LOC116984480
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984480
product: PHD and RING finger domain-containing protein 1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033038610.1
SIO_010081: LOC116984480
subclass of: SO_0000673
so part of: LOC116984480
location: complement(join(613121..613899,614749..614877,619640..619945,621045..621202,625184..628789,632350..632501,633809..633937,634223..634410,634498..634631,635122..635260,636762..636943,638751..638842,645190..645399))
location: region:613121-645399:-1
so has part: feature:645190-645399:-1:exon
so has part: feature:638751-638842:-1:exon
so has part: feature:636762-636943:-1:exon
so has part: feature:635122-635260:-1:exon
so has part: feature:634498-634631:-1:exon
so has part: feature:634223-634410:-1:exon
so has part: feature:633809-633937:-1:exon
so has part: feature:632350-632501:-1:exon
so has part: feature:625184-628789:-1:exon
so has part: feature:621045-621202:-1:exon
so has part: feature:619640-619945:-1:exon
so has part: feature:614749-614877:-1:exon
so has part: feature:613121-613899:-1:exon

position:645399:-1
position: 645399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645190-645399:-1:exon

position:645190:-1
position: 645190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:638751-638842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:636762-636943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635122-635260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634498-634631:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:634223-634410:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:633809-633937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:632350-632501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:625184-628789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:621045-621202:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:619640-619945:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:614749-614877:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:613121-613899:-1:exon

LOC116984480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD and RING finger domain-containing protein 1-like isoform X2
translation: MDEDQDEPINISVTLGKSQRKREVIAIFSDEESSSEEGDDVDEGDTDDDGEGAEDDDLEDDEDDDDEEDEDEEEEEEEAEDGDEAEGGAGGVANKKLGSGEKWASSSDEEGENCPICLNVFRDQAIGTPENCMHYFCLDCILEWAKNANSCPVDRITFKNICVRTHFGGTVLKKLPVLNPNKDNEEGQEDVTNCEVCGRSDREDSLLLCDGCDAGYHLDCLTPALHTVPVEEWFCPECAESNPTAAVEEIDDEELAFLIADAPQEPTTSRLRLTARRTRAIARTRQSERVRANVNRSRITRAHQIRDVPQYLMNPSLLDETIECVVAGLNTAVYHRPLAPRARTTRKRWKRSGKKRKKARTQKSRGKTGLWLGSKVGEKSTRKRRRKTRRRKGAKKVSKVSVTARSRIARSLGLGKPVNGISVPSVYRPLEPSLRIMRTDIGAASLSVYGDPNDLDPFESEADAVYGDTSLGSPLSNKRRILSRSALRSHRPVARPISVKISRNGRLPAVGQEAQPQAVPVPDVLEGILAKQNVLLMDSSNIVINRDGSLKAKVASGQPALLPPGSSRTGEASTGCSASSGYNSGNSTHAPKGDWKTAGVTKKPAAPTFPSTSRFQPSPRQLAASSNMRPAFSGTFTPMPEVSVGPRPGGSVSFPDAEWTGAASKDAGDGQKGTSGFTPFRWLNSASNFHIKSSVGTLKRVAPQPAVRRLDISEFPRIPKIKTQTGSDTQDNGASHLSRQMSSEQTTGARELQKAGERLQSSGSDNSRLCQEKLRALDVAPNLSALTRLKAVHSTRLPKMEAYDPFEPTDDEVQHCGRKDSHSQLQINLKSADDMYDPFEPTGSDPSSSSSTPDRPESRCEGESPMSSPGYGSSVAEKHTEPTLSLYYDSDSIDLSPTQLSEPRQIPTQPQATEDTAESPESPAPRARPSLDSDWEATCDSRLSVEVKDVKLRAESGVSKWDNVRVSVSVCPDGAWSEQRVVNADSDGVSLSASSDEGIEKAVDKIVPINTRTDVDISSEIEVRGRADKEARPESRIRSRSRSSSHSRRQSKNLVHGNRGGHRSRSRSKERKKLRSHSRERRRTRSRSRSRSSSFDRYRRRKLKQERCREKRGRRSRSRERRSGSSSSDLSTDSHKRRRKVSGSKDHKGFYKHSHSSSERGKRRQYHREQSWEQYERQSRRSNSWSRERRPSRSSSRNRDRKKPWPKVREKIRSWSRSSSRERRSGSRSSSRDKRSSHTRSSSREKRRSGRYRDKGRSKTHSRSKERRKPTTHSRTRSRSRDQSRSQSRERGCQSKYQAPEDESRRNFTQEKVLHAEYDQEEKKVPSPNQEPTQRYVSMQELIIPCSAESSQDGNDLPEDQTSAHSLGLKEESVPHIDQVQEATGQWELPEQWRESVCPSESMEGNDVDILTAVEHVWEDSDTQTRQDDSEITSASVPSEYFQMGSPCYQEQATEDAVSIPLIGLSKEEEAVNKEALCPEVEPFPQPFPAEPDPPSAGDDSLNFGKTICSGDQTASVDVSACNQTASVDVSACHQAASVDVSACHQAASVDVSACEKSKSPVPAGSEAVSCFKSEQVDNSSTDECYQKTEPELDSVCLASNSTGKQEESPTDESATASSQKQLGPVNVESSKECVEIVLLQQAEAVNVKAELDTAAQGCNTEVKAKPLVKRVTWNLETEKDEASSAKPARIPMSYRTHRYNKESIWKPPETSQPASPMPLFPPAAPNYMIPPPIFPGLFPPQAFNQLNMPPPFMPPFPPLHPPPYAPVSQPAPPYIMQGGIPLIGSTPVPPLLPPPTYQAGTAAAQVAVPVVAPPLAAEAHVAQVEANLDTDNKVSEDRTQNENYIKKLHLQERAVEEAKLALKPYYQNKDITKEEYKEILRKAVQKICHSKSGEINPVKVANLVKGYVEKYKHIRKYKKGAEGESSKETDSKAEES
SIO_010081: LOC116984480
subclass of: SO_0000673
so part of: LOC116984480
location: complement(join(613747..613899,614749..614877,619640..619945,621045..621202,625184..625697,625896..628789,632350..632501,633809..633937,634223..634410,634498..634631,635122..635260,636762..636943,638751..638842,654421..654542,661235..661318,664115..664311,670222..670368,673088..673181))
location: region:613747-673181:-1
so has part: feature:673088-673181:-1:exon
so has part: feature:670222-670368:-1:exon
so has part: feature:664115-664311:-1:exon
so has part: feature:661235-661318:-1:exon
so has part: feature:654421-654542:-1:exon
so has part: feature:638751-638842:-1:exon
so has part: feature:636762-636943:-1:exon
so has part: feature:635122-635260:-1:exon
so has part: feature:634498-634631:-1:exon
so has part: feature:634223-634410:-1:exon
so has part: feature:633809-633937:-1:exon
so has part: feature:632350-632501:-1:exon
so has part: feature:625896-628789:-1:exon
so has part: feature:625184-625697:-1:exon
so has part: feature:621045-621202:-1:exon
so has part: feature:619640-619945:-1:exon
so has part: feature:614749-614877:-1:exon
so has part: feature:613747-613899:-1:exon

XP_032894500.1
type: Protein
SIO_000068: ncbiprotein

position:613747:-1
position: 613747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673181:-1
position: 673181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673088-673181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670222-670368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664115-664311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:661235-661318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:654421-654542:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638751-638842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636762-636943:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:635122-635260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634498-634631:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:634223-634410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:633809-633937:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:632350-632501:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:625896-628789:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:625184-625697:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:621045-621202:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:619640-619945:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614749-614877:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:613747-613899:-1:exon

LOC116984480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD and RING finger domain-containing protein 1-like isoform X1
translation: MDEDQDEPINISVTLGKSQRKREVIAIFSDEESSSEEGDDVDEGDTDDDGEGAEDDDLEDDEDDDDEEDEDEEEEEEEAEDGDEAEGGAGGVANKKLGSGEKWASSSDEEGENCPICLNVFRDQAIGTPENCMHYFCLDCILEWAKNANSCPVDRITFKNICVRTHFGGTVLKKLPVLNPNKDNEEGQEDVTNCEVCGRSDREDSLLLCDGCDAGYHLDCLTPALHTVPVEEWFCPECAESNPTAAVEEIDDEELAFLIADAPQEPTTSRLRLTARRTRAIARTRQSERVRANVNRSRITRAHQIRDVPQYLMNPSLLDETIECVVAGLNTAVYHRPLAPRARTTRKRWKRSGKKRKKARTQKSRGKTGLWLGSKVGEKSTRKRRRKTRRRKGAKKVSKVSVTARSRIARSLGLGKPVNGISVPSVYRPLEPSLRIMRTDIGAASLSVYGDPNDLDPFESEADAVYGDTSLGSPLSNKRRILSRSALRSHRPVARPISVKISRNGRLPAVGQEAQPQAVPVPDVLEGILAKQNVLLMDSSNIVINRDGSLKAKVASGQPALLPPGSSRTGEASTGCSASSGYNSGNSTHAPKGDWKTAGVTKKPAAPTFPSTSRFQPSPRQLAASSNMRPAFSGTFTPMPEVSVGPRPGGSVSFPDAEWTGAASKDAGDGQKGTSGFTPFRWLNSASNFHIKSSVGTLKRVAPQPAVRRLDISEFPRIPKIKTQTGSDTQDNGASHLSRQMSSEQTTGARELQKAGERLQSSGSDNSRLCQEKLRALDVAPNLSALTRLKAVHSTRLPKMEAYDPFEPTDDEVQHCGRKDSHSQLQINLKSADDMYDPFEPTGSDPSSSSSTPDRPESRCEGESPMSSPGYGSSVAEKHTEPTLSLYYDSDSIDLSPTQLSEPRQIPTQPQATEDTAESPESPAPRARPSLDSDWEATCDSRLSVEVKDVKLRAESGVSKWDNVRVSVSVCPDGAWSEQRVVNADSDGVSLSASSDEGIEKAVDKIVPINTRTDVDISSEIEVRGRADKEARPESRIRSRSRSSSHSRRQSKNLVHGNRGGHRSRSRSKERKKLRSHSRERRRTRSRSRSRSSSFDRYRRRKLKQERCREKRGRRSRSRERRSGSSSSDLSTDSHKRRRKVSGSKDHKGFYKHSHSSSERGKRRQYHREQSWEQYERQSRRSNSWSRERRPSRSSSRNRDRKKPWPKVREKIRSWSRSSSRERRSGSRSSSRDKRSSHTRSSSREKRRSGRYRDKGRSKTHSRSKERRKPTTHSRTRSRSRDQSRSQSRERGCQSKYQAPEDESRRNFTQEKVLHAEYDQEEKKVPSPNQEPTQRYVSMQELIIPCSAESSQDGNDLPEDQTSAHSLGLKEESVPHIDQVQEATGQWELPEQWRESVCPSESMEGNDVDILTAVEHVWEDSDTQTRQDDSEITSASVPSEYFQMGSPCYQEQATEDAVSIPLIGLSKEEEAVNKEALCPEVEPFPQPFPAEPDPPSAGDDSLNFGKTICSGDQTASVDVSACNQTASVDVSACHQAASVDVSACHQAASVDVSACHQAASVDVSTCHQAASVDVSACNQTASVDVSACNQTASVDVSACHQAASVDVSACHQAASVDVSACEKSKSPVPAGSEAVSCFKSEQVDNSSTDECYQKTEPELDSVCLASNSTGKQEESPTDESATASSQKQLGPVNVESSKECVEIVLLQQAEAVNVKAELDTAAQGCNTEVKAKPLVKRVTWNLETEKDEASSAKPARIPMSYRTHRYNKESIWKPPETSQPASPMPLFPPAAPNYMIPPPIFPGLFPPQAFNQLNMPPPFMPPFPPLHPPPYAPVSQPAPPYIMQGGIPLIGSTPVPPLLPPPTYQAGTAAAQVAVPVVAPPLAAEAHVAQVEANLDTDNKVSEDRTQNENYIKKLHLQERAVEEAKLALKPYYQNKDITKEEYKEILRKAVQKICHSKSGEINPVKVANLVKGYVEKYKHIRKYKKGAEGESSKETDSKA…
SIO_010081: LOC116984480
subclass of: SO_0000673
so part of: LOC116984480
location: complement(join(613747..613899,614749..614877,619640..619945,621045..621202,625184..628789,632350..632501,633809..633937,634223..634410,634498..634631,635122..635260,636762..636943,638751..638842,654421..654542,661235..661318,664115..664311,670222..670368,673088..673181))
location: region:613747-673181:-1
so has part: feature:673088-673181:-1:exon
so has part: feature:670222-670368:-1:exon
so has part: feature:664115-664311:-1:exon
so has part: feature:661235-661318:-1:exon
so has part: feature:654421-654542:-1:exon
so has part: feature:638751-638842:-1:exon
so has part: feature:636762-636943:-1:exon
so has part: feature:635122-635260:-1:exon
so has part: feature:634498-634631:-1:exon
so has part: feature:634223-634410:-1:exon
so has part: feature:633809-633937:-1:exon
so has part: feature:632350-632501:-1:exon
so has part: feature:625184-628789:-1:exon
so has part: feature:621045-621202:-1:exon
so has part: feature:619640-619945:-1:exon
so has part: feature:614749-614877:-1:exon
so has part: feature:613747-613899:-1:exon

XP_032894498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:673088-673181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670222-670368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664115-664311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:661235-661318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:654421-654542:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638751-638842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636762-636943:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:635122-635260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634498-634631:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:634223-634410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:633809-633937:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:632350-632501:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:625184-628789:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:621045-621202:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:619640-619945:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614749-614877:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:613747-613899:-1:exon

LOC116984480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD and RING finger domain-containing protein 1-like isoform X1
translation: MDEDQDEPINISVTLGKSQRKREVIAIFSDEESSSEEGDDVDEGDTDDDGEGAEDDDLEDDEDDDDEEDEDEEEEEEEAEDGDEAEGGAGGVANKKLGSGEKWASSSDEEGENCPICLNVFRDQAIGTPENCMHYFCLDCILEWAKNANSCPVDRITFKNICVRTHFGGTVLKKLPVLNPNKDNEEGQEDVTNCEVCGRSDREDSLLLCDGCDAGYHLDCLTPALHTVPVEEWFCPECAESNPTAAVEEIDDEELAFLIADAPQEPTTSRLRLTARRTRAIARTRQSERVRANVNRSRITRAHQIRDVPQYLMNPSLLDETIECVVAGLNTAVYHRPLAPRARTTRKRWKRSGKKRKKARTQKSRGKTGLWLGSKVGEKSTRKRRRKTRRRKGAKKVSKVSVTARSRIARSLGLGKPVNGISVPSVYRPLEPSLRIMRTDIGAASLSVYGDPNDLDPFESEADAVYGDTSLGSPLSNKRRILSRSALRSHRPVARPISVKISRNGRLPAVGQEAQPQAVPVPDVLEGILAKQNVLLMDSSNIVINRDGSLKAKVASGQPALLPPGSSRTGEASTGCSASSGYNSGNSTHAPKGDWKTAGVTKKPAAPTFPSTSRFQPSPRQLAASSNMRPAFSGTFTPMPEVSVGPRPGGSVSFPDAEWTGAASKDAGDGQKGTSGFTPFRWLNSASNFHIKSSVGTLKRVAPQPAVRRLDISEFPRIPKIKTQTGSDTQDNGASHLSRQMSSEQTTGARELQKAGERLQSSGSDNSRLCQEKLRALDVAPNLSALTRLKAVHSTRLPKMEAYDPFEPTDDEVQHCGRKDSHSQLQINLKSADDMYDPFEPTGSDPSSSSSTPDRPESRCEGESPMSSPGYGSSVAEKHTEPTLSLYYDSDSIDLSPTQLSEPRQIPTQPQATEDTAESPESPAPRARPSLDSDWEATCDSRLSVEVKDVKLRAESGVSKWDNVRVSVSVCPDGAWSEQRVVNADSDGVSLSASSDEGIEKAVDKIVPINTRTDVDISSEIEVRGRADKEARPESRIRSRSRSSSHSRRQSKNLVHGNRGGHRSRSRSKERKKLRSHSRERRRTRSRSRSRSSSFDRYRRRKLKQERCREKRGRRSRSRERRSGSSSSDLSTDSHKRRRKVSGSKDHKGFYKHSHSSSERGKRRQYHREQSWEQYERQSRRSNSWSRERRPSRSSSRNRDRKKPWPKVREKIRSWSRSSSRERRSGSRSSSRDKRSSHTRSSSREKRRSGRYRDKGRSKTHSRSKERRKPTTHSRTRSRSRDQSRSQSRERGCQSKYQAPEDESRRNFTQEKVLHAEYDQEEKKVPSPNQEPTQRYVSMQELIIPCSAESSQDGNDLPEDQTSAHSLGLKEESVPHIDQVQEATGQWELPEQWRESVCPSESMEGNDVDILTAVEHVWEDSDTQTRQDDSEITSASVPSEYFQMGSPCYQEQATEDAVSIPLIGLSKEEEAVNKEALCPEVEPFPQPFPAEPDPPSAGDDSLNFGKTICSGDQTASVDVSACNQTASVDVSACHQAASVDVSACHQAASVDVSACHQAASVDVSTCHQAASVDVSACNQTASVDVSACNQTASVDVSACHQAASVDVSACHQAASVDVSACEKSKSPVPAGSEAVSCFKSEQVDNSSTDECYQKTEPELDSVCLASNSTGKQEESPTDESATASSQKQLGPVNVESSKECVEIVLLQQAEAVNVKAELDTAAQGCNTEVKAKPLVKRVTWNLETEKDEASSAKPARIPMSYRTHRYNKESIWKPPETSQPASPMPLFPPAAPNYMIPPPIFPGLFPPQAFNQLNMPPPFMPPFPPLHPPPYAPVSQPAPPYIMQGGIPLIGSTPVPPLLPPPTYQAGTAAAQVAVPVVAPPLAAEAHVAQVEANLDTDNKVSEDRTQNENYIKKLHLQERAVEEAKLALKPYYQNKDITKEEYKEILRKAVQKICHSKSGEINPVKVANLVKGYVEKYKHIRKYKKGAEGESSKETDSKA…
SIO_010081: LOC116984480
subclass of: SO_0000673
so part of: LOC116984480
location: complement(join(613747..613899,614749..614877,619640..619945,621045..621202,625184..628789,632350..632501,633809..633937,634223..634410,634498..634631,635122..635260,636762..636943,638751..638842,654421..654542,661235..661318,664115..664311,670222..670368,673088..673181))
location: region:613747-673181:-1
so has part: feature:673088-673181:-1:exon
so has part: feature:670222-670368:-1:exon
so has part: feature:664115-664311:-1:exon
so has part: feature:661235-661318:-1:exon
so has part: feature:654421-654542:-1:exon
so has part: feature:638751-638842:-1:exon
so has part: feature:636762-636943:-1:exon
so has part: feature:635122-635260:-1:exon
so has part: feature:634498-634631:-1:exon
so has part: feature:634223-634410:-1:exon
so has part: feature:633809-633937:-1:exon
so has part: feature:632350-632501:-1:exon
so has part: feature:625184-628789:-1:exon
so has part: feature:621045-621202:-1:exon
so has part: feature:619640-619945:-1:exon
so has part: feature:614749-614877:-1:exon
so has part: feature:613747-613899:-1:exon

XP_032894499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:673088-673181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670222-670368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664115-664311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:661235-661318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:654421-654542:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638751-638842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636762-636943:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:635122-635260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634498-634631:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:634223-634410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:633809-633937:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:632350-632501:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:625184-628789:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:621045-621202:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:619640-619945:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614749-614877:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:613747-613899:-1:exon

LOC116984480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD and RING finger domain-containing protein 1-like isoform X3
translation: MSTSAPSPKLQGYHLDCLTPALHTVPVEEWFCPECAESNPTAAVEEIDDEELAFLIADAPQEPTTSRLRLTARRTRAIARTRQSERVRANVNRSRITRAHQIRDVPQYLMNPSLLDETIECVVAGLNTAVYHRPLAPRARTTRKRWKRSGKKRKKARTQKSRGKTGLWLGSKVGEKSTRKRRRKTRRRKGAKKVSKVSVTARSRIARSLGLGKPVNGISVPSVYRPLEPSLRIMRTDIGAASLSVYGDPNDLDPFESEADAVYGDTSLGSPLSNKRRILSRSALRSHRPVARPISVKISRNGRLPAVGQEAQPQAVPVPDVLEGILAKQNVLLMDSSNIVINRDGSLKAKVASGQPALLPPGSSRTGEASTGCSASSGYNSGNSTHAPKGDWKTAGVTKKPAAPTFPSTSRFQPSPRQLAASSNMRPAFSGTFTPMPEVSVGPRPGGSVSFPDAEWTGAASKDAGDGQKGTSGFTPFRWLNSASNFHIKSSVGTLKRVAPQPAVRRLDISEFPRIPKIKTQTGSDTQDNGASHLSRQMSSEQTTGARELQKAGERLQSSGSDNSRLCQEKLRALDVAPNLSALTRLKAVHSTRLPKMEAYDPFEPTDDEVQHCGRKDSHSQLQINLKSADDMYDPFEPTGSDPSSSSSTPDRPESRCEGESPMSSPGYGSSVAEKHTEPTLSLYYDSDSIDLSPTQLSEPRQIPTQPQATEDTAESPESPAPRARPSLDSDWEATCDSRLSVEVKDVKLRAESGVSKWDNVRVSVSVCPDGAWSEQRVVNADSDGVSLSASSDEGIEKAVDKIVPINTRTDVDISSEIEVRGRADKEARPESRIRSRSRSSSHSRRQSKNLVHGNRGGHRSRSRSKERKKLRSHSRERRRTRSRSRSRSSSFDRYRRRKLKQERCREKRGRRSRSRERRSGSSSSDLSTDSHKRRRKVSGSKDHKGFYKHSHSSSERGKRRQYHREQSWEQYERQSRRSNSWSRERRPSRSSSRNRDRKKPWPKVREKIRSWSRSSSRERRSGSRSSSRDKRSSHTRSSSREKRRSGRYRDKGRSKTHSRSKERRKPTTHSRTRSRSRDQSRSQSRERGCQSKYQAPEDESRRNFTQEKVLHAEYDQEEKKVPSPNQEPTQRYVSMQELIIPCSAESSQDGNDLPEDQTSAHSLGLKEESVPHIDQVQEATGQWELPEQWRESVCPSESMEGNDVDILTAVEHVWEDSDTQTRQDDSEITSASVPSEYFQMGSPCYQEQATEDAVSIPLIGLSKEEEAVNKEALCPEVEPFPQPFPAEPDPPSAGDDSLNFGKTICSGDQTASVDVSACNQTASVDVSACHQAASVDVSACHQAASVDVSACHQAASVDVSTCHQAASVDVSACNQTASVDVSACNQTASVDVSACHQAASVDVSACHQAASVDVSACEKSKSPVPAGSEAVSCFKSEQVDNSSTDECYQKTEPELDSVCLASNSTGKQEESPTDESATASSQKQLGPVNVESSKECVEIVLLQQAEAVNVKAELDTAAQGCNTEVKAKPLVKRVTWNLETEKDEASSAKPARIPMSYRTHRYNKESIWKPPETSQPASPMPLFPPAAPNYMIPPPIFPGLFPPQAFNQLNMPPPFMPPFPPLHPPPYAPVSQPAPPYIMQGGIPLIGSTPVPPLLPPPTYQAGTAAAQVAVPVVAPPLAAEAHVAQVEANLDTDNKVSEDRTQNENYIKKLHLQERAVEEAKLALKPYYQNKDITKEEYKEILRKAVQKICHSKSGEINPVKVANLVKGYVEKYKHIRKYKKGAEGESSKETDSKAEES
SIO_010081: LOC116984480
subclass of: SO_0000673
so part of: LOC116984480
location: complement(join(613747..613899,614749..614877,619640..619945,621045..621202,625184..628789,632350..632501,633809..633937,634223..634410,634498..634631,635122..635260,636762..636943,638751..638842,645190..645224))
location: region:613747-645224:-1
so has part: feature:645190-645224:-1:exon
so has part: feature:638751-638842:-1:exon
so has part: feature:636762-636943:-1:exon
so has part: feature:635122-635260:-1:exon
so has part: feature:634498-634631:-1:exon
so has part: feature:634223-634410:-1:exon
so has part: feature:633809-633937:-1:exon
so has part: feature:632350-632501:-1:exon
so has part: feature:625184-628789:-1:exon
so has part: feature:621045-621202:-1:exon
so has part: feature:619640-619945:-1:exon
so has part: feature:614749-614877:-1:exon
so has part: feature:613747-613899:-1:exon

XP_032894501.1
type: Protein
SIO_000068: ncbiprotein

position:645224:-1
position: 645224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645190-645224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638751-638842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:636762-636943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635122-635260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634498-634631:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:634223-634410:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:633809-633937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:632350-632501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:625184-628789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:621045-621202:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:619640-619945:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:614749-614877:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:613747-613899:-1:exon

LOC116984480
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984480
product: PHD and RING finger domain-containing protein 1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033038611.1
SIO_010081: LOC116984480
subclass of: SO_0000673
so part of: LOC116984480
location: complement(join(625404..625593,625655..628789,632350..632501,633809..633937,634223..634410,634498..634631,635122..635260,636762..636943,638751..638842,654421..654542,661235..661318,664115..664311,670222..670368,673088..673205,683115..683243))
location: region:625404-683243:-1
so has part: feature:683115-683243:-1:exon
so has part: feature:673088-673205:-1:exon
so has part: feature:670222-670368:-1:exon
so has part: feature:664115-664311:-1:exon
so has part: feature:661235-661318:-1:exon
so has part: feature:654421-654542:-1:exon
so has part: feature:638751-638842:-1:exon
so has part: feature:636762-636943:-1:exon
so has part: feature:635122-635260:-1:exon
so has part: feature:634498-634631:-1:exon
so has part: feature:634223-634410:-1:exon
so has part: feature:633809-633937:-1:exon
so has part: feature:632350-632501:-1:exon
so has part: feature:625655-628789:-1:exon
so has part: feature:625404-625593:-1:exon

position:625404:-1
position: 625404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683115-683243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:673088-673205:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:670222-670368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:664115-664311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661235-661318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654421-654542:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:638751-638842:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636762-636943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:635122-635260:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:634498-634631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634223-634410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:633809-633937:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:632350-632501:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:625655-628789:-1:exon

position:625655:-1
position: 625655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:625404-625593:-1:exon

position:625593:-1
position: 625593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116984480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD and RING finger domain-containing protein 1-like isoform X4
translation: MDEDQDEPINISVTLGKSQRKREVIAIFSDEESSSEEGDDVDEGDTDDDGEGAEDDDLEDDEDDDDEEDEDEEEEEEEAEDGDEAEGGAGGVANKKLGSGEKWASSSDEEGENCPICLNVFRDQAIGTPENCMHYFCLDCILEWAKNANSCPVDRITFKNICVRTHFGGTVLKKLPVLNPNKDNEEGQEDVTNCEVCGRSDREDSLLLCDGCDAGYHLDCLTPALHTVPVEEWFCPECAESNPTAAVEEIDDEELAFLIADAPQEPTTSRLRLTARRTRAIARTRQSERVRANVNRSRITRAHQIRDVPQYLMNPSLLDETIECVVAGLNTAVYHRPLAPRARTTRKRWKRSGKKRKKARTQKSRGKTGLWLGSKVGEKSTRKRRRKTRRRKGAKKVSKVSVTARSRIARSLGLGKPVNGISVPSVYRPLEPSLRIMRTDIGAASLSVYGDPNDLDPFESEADAVYGDTSLGSPLSNKRRILSRSALRSHRPVARPISVKISRNGRLPAVGQEAQPQAVPVPDVLEGILAKQNVLLMDSSNIVINRDGSLKAKVASGQPALLPPGSSRTGEASTGCSASSGYNSGNSTHAPKGDWKTAGVTKKPAAPTFPSTSRFQPSPRQLAASSNMRPAFSGTFTPMPEVSVGPRPGGSVSFPDAEWTGAASKDAGDGQKGTSGFTPFRWLNSASNFHIKSSVGTLKRVAPQPAVRRLDISEFPRIPKIKTQTGSDTQDNGASHLSRQMSSEQTTGARELQKAGERLQSSGSDNSRLCQEKLRALDVAPNLSALTRLKAVHSTRLPKMEAYDPFEPTDDEVQHCGRKDSHSQLQINLKSADDMYDPFEPTGSDPSSSSSTPDRPESRCEGESPMSSPGYGSSVAEKHTEPTLSLYYDSDSIDLSPTQLSEPRQIPTQPQATEDTAESPESPAPRARPSLDSDWEATCDSRLSVEVKDVKLRAESGVSKWDNVRVSVSVCPDGAWSEQRVVNADSDGVSLSASSDEGIEKAVDKIVPINTRTDVDISSEIEVRGRADKEARPESRIRSRSRSSSHSRRQSKNLVHGNRGGHRSRSRSKERKKLRSHSRERRRTRSRSRSRSSSFDRYRRRKLKQERCREKRGRRSRSRERRSGSSSSDLSTDSHKRRRKVSGSKDHKGFYKHSHSSSERGKRRQYHREQSWEQYERQSRRSNSWSRERRPSRSSSRNRDRKKPWPKVREKIRSWSRSSSRERRSGSRSSSRDKRSSHTRSSSREKRRSGRYRDKGRSKTHSRSKERRKPTTHSRTRSRSRDQSRSQSRERGCQSKYQAPEDESRRNFTQEKVLHAEYDQEEKKVPSPNQEPTQRYVSMQELIIPCSAESSQDGNDLPEDQTSAHSLGLKEESVPHIDQVQEATGQWELPEQWRESVCPSESMEGNDVDILTAVEHVWEDSDTQTRQDDSEITSASVPSEYFQMGSPCYQEQATEDAVSIPLIGLSKEEEAVNKEALCPEVEPFPQPFPAEPDPPSAGDDSLNFGKTICSGDQTASVDVSACNQTASVDVSACHQAASVDVSACHQAASVDVSACHQAASVDVSTCHQAASVDVSACNQTASVDVSACNQTASVDVSASHVRSPKALSLQVLRL
SIO_010081: LOC116984480
subclass of: SO_0000673
so part of: LOC116984480
location: complement(join(625544..625593,625655..628789,632350..632501,633809..633937,634223..634410,634498..634631,635122..635260,636762..636943,638751..638842,654421..654542,661235..661318,664115..664311,670222..670368,673088..673181))
location: region:625544-673181:-1
so has part: feature:673088-673181:-1:exon
so has part: feature:670222-670368:-1:exon
so has part: feature:664115-664311:-1:exon
so has part: feature:661235-661318:-1:exon
so has part: feature:654421-654542:-1:exon
so has part: feature:638751-638842:-1:exon
so has part: feature:636762-636943:-1:exon
so has part: feature:635122-635260:-1:exon
so has part: feature:634498-634631:-1:exon
so has part: feature:634223-634410:-1:exon
so has part: feature:633809-633937:-1:exon
so has part: feature:632350-632501:-1:exon
so has part: feature:625655-628789:-1:exon
so has part: feature:625544-625593:-1:exon

XP_032894502.1
type: Protein
SIO_000068: ncbiprotein

position:625544:-1
position: 625544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673088-673181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670222-670368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664115-664311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:661235-661318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:654421-654542:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638751-638842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636762-636943:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:635122-635260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634498-634631:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:634223-634410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:633809-633937:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:632350-632501:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:625655-628789:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:625544-625593:-1:exon

c20h11orf49
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: c20h11orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(697540..793449)
location: region:697540-793449:-1
so has part: feature:697540-793449:-1:exon
subclass of: SO_0000010

116984483
type: Gene
SIO_000068: ncbigene

position:697540:-1
position: 697540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793449:-1
position: 793449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697540-793449:-1:exon

c20h11orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: c20h11orf49
product: chromosome 20 C11orf49 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033038612.1
SIO_010081: c20h11orf49
subclass of: SO_0000673
so part of: c20h11orf49
location: complement(join(697540..698262,698448..698502,698688..698969,700406..700469,710194..710303,712506..712695,718354..718439,734329..734413,758553..758683,793353..793449))
location: region:697540-793449:-1
so has part: feature:793353-793449:-1:exon
so has part: feature:758553-758683:-1:exon
so has part: feature:734329-734413:-1:exon
so has part: feature:718354-718439:-1:exon
so has part: feature:712506-712695:-1:exon
so has part: feature:710194-710303:-1:exon
so has part: feature:700406-700469:-1:exon
so has part: feature:698688-698969:-1:exon
so has part: feature:698448-698502:-1:exon
so has part: feature:697540-698262:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:793353-793449:-1:exon

position:793353:-1
position: 793353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:758553-758683:-1:exon

position:758553:-1
position: 758553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758683:-1
position: 758683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:734329-734413:-1:exon

position:734329:-1
position: 734329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734413:-1
position: 734413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:718354-718439:-1:exon

position:718354:-1
position: 718354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718439:-1
position: 718439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:712506-712695:-1:exon

position:712506:-1
position: 712506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712695:-1
position: 712695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:710194-710303:-1:exon

position:710194:-1
position: 710194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710303:-1
position: 710303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:700406-700469:-1:exon

position:700406:-1
position: 700406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700469:-1
position: 700469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:698688-698969:-1:exon

position:698688:-1
position: 698688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698969:-1
position: 698969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:698448-698502:-1:exon

position:698448:-1
position: 698448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698502:-1
position: 698502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:697540-698262:-1:exon

position:698262:-1
position: 698262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

c20h11orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: c20h11orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0705 protein C11orf49 homolog
translation: MFWQCFRQIGKNGDLLTVLEYHSLLQLICHDFPLDLAQKAARIILMDDAMDCPMSFVDFLYAFQIQFYYCEFLGSIGIVYQDLHMGKNPNTVIVPTSSIEQCQSPTSETPTQEGVDAAQFYDCLETLCDRYRYKHPSTLSLKQILNKVKRVTFFGFLMAIVKHEGINGTLGIVPNKLEVFTDSEMDQELEKFIDQLLNTPATSRPTNKEPTRKTTHRKAITHRKKVNVESDGSTEETDSSEN
SIO_010081: c20h11orf49
subclass of: SO_0000673
so part of: c20h11orf49
location: complement(join(698816..698969,700406..700469,710194..710303,712506..712695,718354..718439,734329..734413,758553..758592))
location: region:698816-758592:-1
so has part: feature:758553-758592:-1:exon
so has part: feature:734329-734413:-1:exon
so has part: feature:718354-718439:-1:exon
so has part: feature:712506-712695:-1:exon
so has part: feature:710194-710303:-1:exon
so has part: feature:700406-700469:-1:exon
so has part: feature:698816-698969:-1:exon

XP_032894503.1
type: Protein
SIO_000068: ncbiprotein

position:698816:-1
position: 698816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758592:-1
position: 758592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758553-758592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:734329-734413:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718354-718439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:712506-712695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:710194-710303:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:700406-700469:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:698816-698969:-1:exon

LOC116984887
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984887
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(803438..803629)
location: region:803438-803629:-1
so has part: feature:803438-803629:-1:exon
subclass of: SO_0000623

116984887
type: Gene
SIO_000068: ncbigene

position:803438:-1
position: 803438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803629:-1
position: 803629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803438-803629:-1:exon

LOC116984887
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snRNA
gene: LOC116984887
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004415158.1
SIO_010081: LOC116984887
subclass of: SO_0000673
so part of: LOC116984887
location: complement(803438..803629)
location: region:803438-803629:-1
so has part: feature:803438-803629:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:803438-803629:-1:exon

LOC116984429
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984429
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 889827..891855
location: region:889827-891855:1
so has part: feature:889827-891855:1:exon
subclass of: SO_0000011

116984429
type: Gene
SIO_000068: ncbigene

position:889827:1
position: 889827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891855:1
position: 891855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:889827-891855:1:exon

LOC116984429
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116984429
product: uncharacterized LOC116984429
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004415010.1
SIO_010081: LOC116984429
subclass of: SO_0000673
so part of: LOC116984429
location: join(889827..890015,891073..891855)
location: region:889827-891855:1
so has part: feature:889827-890015:1:exon
so has part: feature:891073-891855:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:889827-890015:1:exon

position:890015:1
position: 890015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:891073-891855:1:exon

position:891073:1
position: 891073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

alx4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: alx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 896783..943791
location: region:896783-943791:1
so has part: feature:896783-943791:1:exon
subclass of: SO_0000010

116984487
type: Gene
SIO_000068: ncbigene

position:896783:1
position: 896783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943791:1
position: 943791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896783-943791:1:exon

alx4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: alx4
product: ALX homeobox 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033038619.1
SIO_010081: alx4
subclass of: SO_0000673
so part of: alx4
location: join(896783..897328,923372..923667,930792..930917,941872..943791)
location: region:896783-943791:1
so has part: feature:896783-897328:1:exon
so has part: feature:923372-923667:1:exon
so has part: feature:930792-930917:1:exon
so has part: feature:941872-943791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896783-897328:1:exon

position:897328:1
position: 897328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:923372-923667:1:exon

position:923372:1
position: 923372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923667:1
position: 923667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:930792-930917:1:exon

position:930792:1
position: 930792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930917:1
position: 930917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:941872-943791:1:exon

position:941872:1
position: 941872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

alx4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: alx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein aristaless-like 4
translation: MNGETCVSYCDMSSMDSYYNPGPQGREHQHSPFRTFQPADKFGPNFLPNKGQSYGDKTRNPFQQECEPLDANVQATTGDSAFNKYLYMQTAGRTSKSPAHNKKIQDSSHNGALIPCYAKDSALGESELSPSAEPGLMDNYLGVKEAAMKGSNSELPGAMDKGEGDSNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRSHFSTAYELPILTRENYAQIQNPSWIGNNGASSPVPACVVPCETVTSCMSPHTHTHAGVSEFLGVSAPGSHVGQGHMGGLFGTAGLGAAINTFDISNEPDRKSSSIAALRMKAKEHSAAISWAT
SIO_010081: alx4
subclass of: SO_0000673
so part of: alx4
location: join(896977..897328,923372..923667,930792..930917,941872..942189)
location: region:896977-942189:1
so has part: feature:896977-897328:1:exon
so has part: feature:923372-923667:1:exon
so has part: feature:930792-930917:1:exon
so has part: feature:941872-942189:1:exon

XP_032894510.1
type: Protein
SIO_000068: ncbiprotein

position:896977:1
position: 896977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942189:1
position: 942189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896977-897328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923372-923667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:930792-930917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941872-942189:1:exon

ext2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ext2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(948817..1136744)
location: region:948817-1136744:-1
so has part: feature:948817-1136744:-1:exon
subclass of: SO_0000010

116984484
type: Gene
SIO_000068: ncbigene

position:948817:-1
position: 948817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136744:-1
position: 1136744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948817-1136744:-1:exon

ext2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ext2
product: exostosin glycosyltransferase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033038616.1
SIO_010081: ext2
subclass of: SO_0000673
so part of: ext2
location: complement(join(948817..951836,952558..952640,953579..953707,956640..956783,976071..976237,981373..981562,989072..989203,1009090..1009183,1010325..1010464,1018202..1018397,1019660..1019776,1030713..1030802,1036480..1037039,1136687..1136744))
location: region:948817-1136744:-1
so has part: feature:1136687-1136744:-1:exon
so has part: feature:1036480-1037039:-1:exon
so has part: feature:1030713-1030802:-1:exon
so has part: feature:1019660-1019776:-1:exon
so has part: feature:1018202-1018397:-1:exon
so has part: feature:1010325-1010464:-1:exon
so has part: feature:1009090-1009183:-1:exon
so has part: feature:989072-989203:-1:exon
so has part: feature:981373-981562:-1:exon
so has part: feature:976071-976237:-1:exon
so has part: feature:956640-956783:-1:exon
so has part: feature:953579-953707:-1:exon
so has part: feature:952558-952640:-1:exon
so has part: feature:948817-951836:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1136687-1136744:-1:exon

position:1136687:-1
position: 1136687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1036480-1037039:-1:exon

position:1036480:-1
position: 1036480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037039:-1
position: 1037039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1030713-1030802:-1:exon

position:1030713:-1
position: 1030713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030802:-1
position: 1030802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1019660-1019776:-1:exon

position:1019660:-1
position: 1019660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019776:-1
position: 1019776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1018202-1018397:-1:exon

position:1018202:-1
position: 1018202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018397:-1
position: 1018397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1010325-1010464:-1:exon

position:1010325:-1
position: 1010325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010464:-1
position: 1010464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1009090-1009183:-1:exon

position:1009090:-1
position: 1009090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009183:-1
position: 1009183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:989072-989203:-1:exon

position:989072:-1
position: 989072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989203:-1
position: 989203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:981373-981562:-1:exon

position:981373:-1
position: 981373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981562:-1
position: 981562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:976071-976237:-1:exon

position:976071:-1
position: 976071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976237:-1
position: 976237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:956640-956783:-1:exon

position:956640:-1
position: 956640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956783:-1
position: 956783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:953579-953707:-1:exon

position:953579:-1
position: 953579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953707:-1
position: 953707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:952558-952640:-1:exon

position:952558:-1
position: 952558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952640:-1
position: 952640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:948817-951836:-1:exon

position:951836:-1
position: 951836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ext2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ext2
product: exostosin glycosyltransferase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 24 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033038613.1
SIO_010081: ext2
subclass of: SO_0000673
so part of: ext2
location: complement(join(948817..951836,952558..952640,953579..953707,956640..956783,976071..976237,981373..981562,989072..989203,1009090..1009183,1010325..1010464,1018202..1018397,1019660..1019776,1030713..1030802,1036480..1037039,1044441..1044578))
location: region:948817-1044578:-1
so has part: feature:1044441-1044578:-1:exon
so has part: feature:1036480-1037039:-1:exon
so has part: feature:1030713-1030802:-1:exon
so has part: feature:1019660-1019776:-1:exon
so has part: feature:1018202-1018397:-1:exon
so has part: feature:1010325-1010464:-1:exon
so has part: feature:1009090-1009183:-1:exon
so has part: feature:989072-989203:-1:exon
so has part: feature:981373-981562:-1:exon
so has part: feature:976071-976237:-1:exon
so has part: feature:956640-956783:-1:exon
so has part: feature:953579-953707:-1:exon
so has part: feature:952558-952640:-1:exon
so has part: feature:948817-951836:-1:exon

position:1044578:-1
position: 1044578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044441-1044578:-1:exon

position:1044441:-1
position: 1044441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1036480-1037039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1030713-1030802:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1019660-1019776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1018202-1018397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1010325-1010464:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1009090-1009183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:989072-989203:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:981373-981562:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:976071-976237:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:956640-956783:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:953579-953707:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:952558-952640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:948817-951836:-1:exon

ext2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ext2
product: exostosin glycosyltransferase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033038614.1
SIO_010081: ext2
subclass of: SO_0000673
so part of: ext2
location: complement(join(948817..951836,952558..952640,953579..953707,956640..956783,976071..976237,981373..981562,989072..989203,1009090..1009183,1010325..1010464,1018202..1018397,1019660..1019776,1030713..1030802,1036480..1037039,1041193..1041282,1044441..1044509))
location: region:948817-1044509:-1
so has part: feature:1044441-1044509:-1:exon
so has part: feature:1041193-1041282:-1:exon
so has part: feature:1036480-1037039:-1:exon
so has part: feature:1030713-1030802:-1:exon
so has part: feature:1019660-1019776:-1:exon
so has part: feature:1018202-1018397:-1:exon
so has part: feature:1010325-1010464:-1:exon
so has part: feature:1009090-1009183:-1:exon
so has part: feature:989072-989203:-1:exon
so has part: feature:981373-981562:-1:exon
so has part: feature:976071-976237:-1:exon
so has part: feature:956640-956783:-1:exon
so has part: feature:953579-953707:-1:exon
so has part: feature:952558-952640:-1:exon
so has part: feature:948817-951836:-1:exon

position:1044509:-1
position: 1044509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044441-1044509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1041193-1041282:-1:exon

position:1041193:-1
position: 1041193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041282:-1
position: 1041282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1036480-1037039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030713-1030802:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1019660-1019776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1018202-1018397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1010325-1010464:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1009090-1009183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:989072-989203:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:981373-981562:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:976071-976237:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:956640-956783:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:953579-953707:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:952558-952640:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:948817-951836:-1:exon

ext2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ext2
product: exostosin glycosyltransferase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033038615.1
SIO_010081: ext2
subclass of: SO_0000673
so part of: ext2
location: complement(join(948817..951836,952558..952640,953579..953707,956640..956783,976071..976237,981373..981562,989072..989203,1009090..1009183,1010325..1010464,1018202..1018397,1019660..1019776,1030713..1030802,1036480..1037039,1044291..1044341))
location: region:948817-1044341:-1
so has part: feature:1044291-1044341:-1:exon
so has part: feature:1036480-1037039:-1:exon
so has part: feature:1030713-1030802:-1:exon
so has part: feature:1019660-1019776:-1:exon
so has part: feature:1018202-1018397:-1:exon
so has part: feature:1010325-1010464:-1:exon
so has part: feature:1009090-1009183:-1:exon
so has part: feature:989072-989203:-1:exon
so has part: feature:981373-981562:-1:exon
so has part: feature:976071-976237:-1:exon
so has part: feature:956640-956783:-1:exon
so has part: feature:953579-953707:-1:exon
so has part: feature:952558-952640:-1:exon
so has part: feature:948817-951836:-1:exon

position:1044341:-1
position: 1044341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044291-1044341:-1:exon

position:1044291:-1
position: 1044291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1036480-1037039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1030713-1030802:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1019660-1019776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1018202-1018397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1010325-1010464:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1009090-1009183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:989072-989203:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:981373-981562:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:976071-976237:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:956640-956783:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:953579-953707:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:952558-952640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:948817-951836:-1:exon

ext2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ext2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exostosin-2
translation: MYASNKYSSRGPTLIPRMKTKHRIYYIALFSVVLLGLIATGMFQFWPNTIETTSDWTVEKRSIHNVPEVKLTDDSAIPERGDLSCRMHTCFDVYRCGYNPKNRIKVYIYPLRKYVDESGTVVSNTISKEYNELLTAISESDFYTDDLNRACLFVPSIDVLNQNSLRIKETAQALVQLSRWDRGTNHLLFNMLPGGPPDYNTALDVPRGRALLAGGGFSTWTYRQGYDVSIPVFSPMLTEANLPEKIPGYRMYFILSAQTAIHSEYRSELETIETEHKDALLILDKCTNLSDDVSSTWKRCHKNQVFDYPQILQEATFCIVLRGARLGQAILSDVLQAGCIPVIVGDSYILPFSEVLDWKRASVVIPEDKLSEMYSILKTIPQQQIEDMQKRARWFWEAYFKSMKAIGLATLQIINDRIYPYAARSYEDWNDPTIVKMVNVNNPLFLPLIPPRSQGFTAVVLTFDRVESLFRVITEISKVPSLSKLLVVWNNQNKSPPEESVWPRIGVPLKVVRTKENKLSNRFFPYDEIETEAVLAIDDDIIMLTSDELQFGYEVWREFPDRLVGYPGRLHLWDHETNKWKYESEWTNEVSMVLTGAAFYHKYFNYLYTYKMPGDIKNWVDEHMNCEDIAMNFLVANMTGKAPIKVTPRKKFKCPECTAIDGLSLDQTHMVERSECINKFASVFGIMPLKVVEHRADPVLYKDDFPEKLKSFPNIGSL
SIO_010081: ext2
subclass of: SO_0000673
so part of: ext2
location: complement(join(951698..951836,952558..952640,953579..953707,956640..956783,976071..976237,981373..981562,989072..989203,1009090..1009183,1010325..1010464,1018202..1018397,1019660..1019776,1030713..1030802,1036480..1037015))
location: region:951698-1037015:-1
so has part: feature:1036480-1037015:-1:exon
so has part: feature:1030713-1030802:-1:exon
so has part: feature:1019660-1019776:-1:exon
so has part: feature:1018202-1018397:-1:exon
so has part: feature:1010325-1010464:-1:exon
so has part: feature:1009090-1009183:-1:exon
so has part: feature:989072-989203:-1:exon
so has part: feature:981373-981562:-1:exon
so has part: feature:976071-976237:-1:exon
so has part: feature:956640-956783:-1:exon
so has part: feature:953579-953707:-1:exon
so has part: feature:952558-952640:-1:exon
so has part: feature:951698-951836:-1:exon

XP_032894504.1
type: Protein
SIO_000068: ncbiprotein

position:951698:-1
position: 951698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037015:-1
position: 1037015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036480-1037015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030713-1030802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1019660-1019776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1018202-1018397:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1010325-1010464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1009090-1009183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989072-989203:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:981373-981562:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:976071-976237:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:956640-956783:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:953579-953707:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952558-952640:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:951698-951836:-1:exon

ext2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ext2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exostosin-2
translation: MYASNKYSSRGPTLIPRMKTKHRIYYIALFSVVLLGLIATGMFQFWPNTIETTSDWTVEKRSIHNVPEVKLTDDSAIPERGDLSCRMHTCFDVYRCGYNPKNRIKVYIYPLRKYVDESGTVVSNTISKEYNELLTAISESDFYTDDLNRACLFVPSIDVLNQNSLRIKETAQALVQLSRWDRGTNHLLFNMLPGGPPDYNTALDVPRGRALLAGGGFSTWTYRQGYDVSIPVFSPMLTEANLPEKIPGYRMYFILSAQTAIHSEYRSELETIETEHKDALLILDKCTNLSDDVSSTWKRCHKNQVFDYPQILQEATFCIVLRGARLGQAILSDVLQAGCIPVIVGDSYILPFSEVLDWKRASVVIPEDKLSEMYSILKTIPQQQIEDMQKRARWFWEAYFKSMKAIGLATLQIINDRIYPYAARSYEDWNDPTIVKMVNVNNPLFLPLIPPRSQGFTAVVLTFDRVESLFRVITEISKVPSLSKLLVVWNNQNKSPPEESVWPRIGVPLKVVRTKENKLSNRFFPYDEIETEAVLAIDDDIIMLTSDELQFGYEVWREFPDRLVGYPGRLHLWDHETNKWKYESEWTNEVSMVLTGAAFYHKYFNYLYTYKMPGDIKNWVDEHMNCEDIAMNFLVANMTGKAPIKVTPRKKFKCPECTAIDGLSLDQTHMVERSECINKFASVFGIMPLKVVEHRADPVLYKDDFPEKLKSFPNIGSL
SIO_010081: ext2
subclass of: SO_0000673
so part of: ext2
location: complement(join(951698..951836,952558..952640,953579..953707,956640..956783,976071..976237,981373..981562,989072..989203,1009090..1009183,1010325..1010464,1018202..1018397,1019660..1019776,1030713..1030802,1036480..1037015))
location: region:951698-1037015:-1
so has part: feature:1036480-1037015:-1:exon
so has part: feature:1030713-1030802:-1:exon
so has part: feature:1019660-1019776:-1:exon
so has part: feature:1018202-1018397:-1:exon
so has part: feature:1010325-1010464:-1:exon
so has part: feature:1009090-1009183:-1:exon
so has part: feature:989072-989203:-1:exon
so has part: feature:981373-981562:-1:exon
so has part: feature:976071-976237:-1:exon
so has part: feature:956640-956783:-1:exon
so has part: feature:953579-953707:-1:exon
so has part: feature:952558-952640:-1:exon
so has part: feature:951698-951836:-1:exon

XP_032894505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1036480-1037015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030713-1030802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1019660-1019776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1018202-1018397:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1010325-1010464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1009090-1009183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989072-989203:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:981373-981562:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:976071-976237:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:956640-956783:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:953579-953707:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952558-952640:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:951698-951836:-1:exon

ext2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ext2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exostosin-2
translation: MYASNKYSSRGPTLIPRMKTKHRIYYIALFSVVLLGLIATGMFQFWPNTIETTSDWTVEKRSIHNVPEVKLTDDSAIPERGDLSCRMHTCFDVYRCGYNPKNRIKVYIYPLRKYVDESGTVVSNTISKEYNELLTAISESDFYTDDLNRACLFVPSIDVLNQNSLRIKETAQALVQLSRWDRGTNHLLFNMLPGGPPDYNTALDVPRGRALLAGGGFSTWTYRQGYDVSIPVFSPMLTEANLPEKIPGYRMYFILSAQTAIHSEYRSELETIETEHKDALLILDKCTNLSDDVSSTWKRCHKNQVFDYPQILQEATFCIVLRGARLGQAILSDVLQAGCIPVIVGDSYILPFSEVLDWKRASVVIPEDKLSEMYSILKTIPQQQIEDMQKRARWFWEAYFKSMKAIGLATLQIINDRIYPYAARSYEDWNDPTIVKMVNVNNPLFLPLIPPRSQGFTAVVLTFDRVESLFRVITEISKVPSLSKLLVVWNNQNKSPPEESVWPRIGVPLKVVRTKENKLSNRFFPYDEIETEAVLAIDDDIIMLTSDELQFGYEVWREFPDRLVGYPGRLHLWDHETNKWKYESEWTNEVSMVLTGAAFYHKYFNYLYTYKMPGDIKNWVDEHMNCEDIAMNFLVANMTGKAPIKVTPRKKFKCPECTAIDGLSLDQTHMVERSECINKFASVFGIMPLKVVEHRADPVLYKDDFPEKLKSFPNIGSL
SIO_010081: ext2
subclass of: SO_0000673
so part of: ext2
location: complement(join(951698..951836,952558..952640,953579..953707,956640..956783,976071..976237,981373..981562,989072..989203,1009090..1009183,1010325..1010464,1018202..1018397,1019660..1019776,1030713..1030802,1036480..1037015))
location: region:951698-1037015:-1
so has part: feature:1036480-1037015:-1:exon
so has part: feature:1030713-1030802:-1:exon
so has part: feature:1019660-1019776:-1:exon
so has part: feature:1018202-1018397:-1:exon
so has part: feature:1010325-1010464:-1:exon
so has part: feature:1009090-1009183:-1:exon
so has part: feature:989072-989203:-1:exon
so has part: feature:981373-981562:-1:exon
so has part: feature:976071-976237:-1:exon
so has part: feature:956640-956783:-1:exon
so has part: feature:953579-953707:-1:exon
so has part: feature:952558-952640:-1:exon
so has part: feature:951698-951836:-1:exon

XP_032894506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1036480-1037015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030713-1030802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1019660-1019776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1018202-1018397:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1010325-1010464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1009090-1009183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989072-989203:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:981373-981562:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:976071-976237:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:956640-956783:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:953579-953707:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952558-952640:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:951698-951836:-1:exon

ext2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ext2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exostosin-2
translation: MYASNKYSSRGPTLIPRMKTKHRIYYIALFSVVLLGLIATGMFQFWPNTIETTSDWTVEKRSIHNVPEVKLTDDSAIPERGDLSCRMHTCFDVYRCGYNPKNRIKVYIYPLRKYVDESGTVVSNTISKEYNELLTAISESDFYTDDLNRACLFVPSIDVLNQNSLRIKETAQALVQLSRWDRGTNHLLFNMLPGGPPDYNTALDVPRGRALLAGGGFSTWTYRQGYDVSIPVFSPMLTEANLPEKIPGYRMYFILSAQTAIHSEYRSELETIETEHKDALLILDKCTNLSDDVSSTWKRCHKNQVFDYPQILQEATFCIVLRGARLGQAILSDVLQAGCIPVIVGDSYILPFSEVLDWKRASVVIPEDKLSEMYSILKTIPQQQIEDMQKRARWFWEAYFKSMKAIGLATLQIINDRIYPYAARSYEDWNDPTIVKMVNVNNPLFLPLIPPRSQGFTAVVLTFDRVESLFRVITEISKVPSLSKLLVVWNNQNKSPPEESVWPRIGVPLKVVRTKENKLSNRFFPYDEIETEAVLAIDDDIIMLTSDELQFGYEVWREFPDRLVGYPGRLHLWDHETNKWKYESEWTNEVSMVLTGAAFYHKYFNYLYTYKMPGDIKNWVDEHMNCEDIAMNFLVANMTGKAPIKVTPRKKFKCPECTAIDGLSLDQTHMVERSECINKFASVFGIMPLKVVEHRADPVLYKDDFPEKLKSFPNIGSL
SIO_010081: ext2
subclass of: SO_0000673
so part of: ext2
location: complement(join(951698..951836,952558..952640,953579..953707,956640..956783,976071..976237,981373..981562,989072..989203,1009090..1009183,1010325..1010464,1018202..1018397,1019660..1019776,1030713..1030802,1036480..1037015))
location: region:951698-1037015:-1
so has part: feature:1036480-1037015:-1:exon
so has part: feature:1030713-1030802:-1:exon
so has part: feature:1019660-1019776:-1:exon
so has part: feature:1018202-1018397:-1:exon
so has part: feature:1010325-1010464:-1:exon
so has part: feature:1009090-1009183:-1:exon
so has part: feature:989072-989203:-1:exon
so has part: feature:981373-981562:-1:exon
so has part: feature:976071-976237:-1:exon
so has part: feature:956640-956783:-1:exon
so has part: feature:953579-953707:-1:exon
so has part: feature:952558-952640:-1:exon
so has part: feature:951698-951836:-1:exon

XP_032894507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1036480-1037015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030713-1030802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1019660-1019776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1018202-1018397:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1010325-1010464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1009090-1009183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989072-989203:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:981373-981562:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:976071-976237:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:956640-956783:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:953579-953707:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952558-952640:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:951698-951836:-1:exon

fibin
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: fibin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1105462..1107371
location: region:1105462-1107371:1
so has part: feature:1105462-1107371:1:exon
subclass of: SO_0000010

116984488
type: Gene
SIO_000068: ncbigene

position:1105462:1
position: 1105462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107371:1
position: 1107371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105462-1107371:1:exon

fibin
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fibin
product: fin bud initiation factor homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033038620.1
SIO_010081: fibin
subclass of: SO_0000673
so part of: fibin
location: 1105462..1107371
location: region:1105462-1107371:1
so has part: feature:1105462-1107371:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1105462-1107371:1:exon

fibin
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fibin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fin bud initiation factor homolog
translation: MLGPSVVYFSLLCSLSRAVFTGPLHPEMSNGTFHHYFVPDGDYEENDDPEKCQMLFQVSDERRCGVGVDTEMYLKEEMTTIRRQVQDAARVLEGVGKNIAYDLEGEDSYGNYLRREASQIGEAFMHSDRSLVELEVKFRQSQEGEVREVNAINDEVVHMLYNTREILKETMEISSGLKDKHELLTLIVRSHGTRLSRLKNDFMRG
SIO_010081: fibin
subclass of: SO_0000673
so part of: fibin
location: 1105977..1106594
location: region:1105977-1106594:1
so has part: feature:1105977-1106594:1:exon

XP_032894511.1
type: Protein
SIO_000068: ncbiprotein

position:1105977:1
position: 1105977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106594:1
position: 1106594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105977-1106594:1:exon

bbox1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: bbox1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1135582..1213499
location: region:1135582-1213499:1
so has part: feature:1135582-1213499:1:exon
subclass of: SO_0000010

116984486
type: Gene
SIO_000068: ncbigene

position:1135582:1
position: 1135582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213499:1
position: 1213499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1135582-1213499:1:exon

bbox1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: bbox1
product: gamma-butyrobetaine hydroxylase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033038618.1
SIO_010081: bbox1
subclass of: SO_0000673
so part of: bbox1
location: join(1135582..1135805,1147897..1148369,1152689..1152803,1187312..1187510,1197238..1197343,1207072..1207268,1212234..1212400,1212938..1213499)
location: region:1135582-1213499:1
so has part: feature:1135582-1135805:1:exon
so has part: feature:1147897-1148369:1:exon
so has part: feature:1152689-1152803:1:exon
so has part: feature:1187312-1187510:1:exon
so has part: feature:1197238-1197343:1:exon
so has part: feature:1207072-1207268:1:exon
so has part: feature:1212234-1212400:1:exon
so has part: feature:1212938-1213499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1135582-1135805:1:exon

position:1135805:1
position: 1135805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1147897-1148369:1:exon

position:1147897:1
position: 1147897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148369:1
position: 1148369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1152689-1152803:1:exon

position:1152689:1
position: 1152689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152803:1
position: 1152803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1187312-1187510:1:exon

position:1187312:1
position: 1187312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187510:1
position: 1187510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1197238-1197343:1:exon

position:1197238:1
position: 1197238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197343:1
position: 1197343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1207072-1207268:1:exon

position:1207072:1
position: 1207072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1207268:1
position: 1207268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1212234-1212400:1:exon

position:1212234:1
position: 1212234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212400:1
position: 1212400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1212938-1213499:1:exon

position:1212938:1
position: 1212938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bbox1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: bbox1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-butyrobetaine dioxygenase isoform X2
translation: MTIADDLIGTVFLIDLHTPVDVCGLHYMNFGLHRVCSAQTGRGRELPAAEALLNLKWTENLDSTRVKTRSQRHFQLRQYCKMWRSAAKYFLNNRIFRNGMQKLLTAQNTLIHPVQNVLYQSRTLHSQTTFKFNFPASAIQKVETSDKHRWFVIHWEDGNHSVYPYAWLRDNCQCPQCFLSSAKARKFAIKDLDVNISPEKIILTDSKISVAWPDQHISEFDANWLRTRCFHQSTREEKQNQYFMRDQLHWGSEFQIPTANFEEVLTCDEVAYKWLCNLRRVGFVQLKHAPAEKGQVAKLGKRIGYVRLTFYGHTWQVEDKPDANNVAYTSGELNLHTDYPALHHPPGIQFLHCIKQTDVGGETTMVDGFHVANQLRRLNPEAFRVLSSVLVDFTDTGKDYCDFSLQSKNKIIDLDHNGNVIQINYNNATRDSVLDLPAEQVHPFLSALKDFVLLMYKPENLVTFKMEPGDVLTFDNWRILHGRLSYHSDGGYERHLEGAYADWDEVMSRARCLKHALYGDK
SIO_010081: bbox1
subclass of: SO_0000673
so part of: bbox1
location: join(1135658..1135805,1147897..1148369,1152689..1152803,1187312..1187510,1197238..1197343,1207072..1207268,1212234..1212400,1212938..1213098)
location: region:1135658-1213098:1
so has part: feature:1135658-1135805:1:exon
so has part: feature:1147897-1148369:1:exon
so has part: feature:1152689-1152803:1:exon
so has part: feature:1187312-1187510:1:exon
so has part: feature:1197238-1197343:1:exon
so has part: feature:1207072-1207268:1:exon
so has part: feature:1212234-1212400:1:exon
so has part: feature:1212938-1213098:1:exon

XP_032894509.1
type: Protein
SIO_000068: ncbiprotein

position:1135658:1
position: 1135658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213098:1
position: 1213098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1135658-1135805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1147897-1148369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1152689-1152803:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1187312-1187510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1197238-1197343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207072-1207268:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1212234-1212400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1212938-1213098:1:exon

bbox1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: bbox1
product: gamma-butyrobetaine hydroxylase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033038617.1
SIO_010081: bbox1
subclass of: SO_0000673
so part of: bbox1
location: join(1136759..1136972,1147897..1148369,1152689..1152803,1187312..1187510,1197238..1197343,1207072..1207268,1212234..1212400,1212938..1213499)
location: region:1136759-1213499:1
so has part: feature:1136759-1136972:1:exon
so has part: feature:1147897-1148369:1:exon
so has part: feature:1152689-1152803:1:exon
so has part: feature:1187312-1187510:1:exon
so has part: feature:1197238-1197343:1:exon
so has part: feature:1207072-1207268:1:exon
so has part: feature:1212234-1212400:1:exon
so has part: feature:1212938-1213499:1:exon

position:1136759:1
position: 1136759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1136759-1136972:1:exon

position:1136972:1
position: 1136972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1147897-1148369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1152689-1152803:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1187312-1187510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1197238-1197343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207072-1207268:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1212234-1212400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1212938-1213499:1:exon

bbox1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: bbox1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-butyrobetaine dioxygenase isoform X1
translation: MNVNTAGRPGLTSPPRHATPRRAHSPSYEQRRRRRTQATADAGILCRTQSAGETSKKEALLNLKWTENLDSTRVKTRSQRHFQLRQYCKMWRSAAKYFLNNRIFRNGMQKLLTAQNTLIHPVQNVLYQSRTLHSQTTFKFNFPASAIQKVETSDKHRWFVIHWEDGNHSVYPYAWLRDNCQCPQCFLSSAKARKFAIKDLDVNISPEKIILTDSKISVAWPDQHISEFDANWLRTRCFHQSTREEKQNQYFMRDQLHWGSEFQIPTANFEEVLTCDEVAYKWLCNLRRVGFVQLKHAPAEKGQVAKLGKRIGYVRLTFYGHTWQVEDKPDANNVAYTSGELNLHTDYPALHHPPGIQFLHCIKQTDVGGETTMVDGFHVANQLRRLNPEAFRVLSSVLVDFTDTGKDYCDFSLQSKNKIIDLDHNGNVIQINYNNATRDSVLDLPAEQVHPFLSALKDFVLLMYKPENLVTFKMEPGDVLTFDNWRILHGRLSYHSDGGYERHLEGAYADWDEVMSRARCLKHALYGDK
SIO_010081: bbox1
subclass of: SO_0000673
so part of: bbox1
location: join(1136801..1136972,1147897..1148369,1152689..1152803,1187312..1187510,1197238..1197343,1207072..1207268,1212234..1212400,1212938..1213098)
location: region:1136801-1213098:1
so has part: feature:1136801-1136972:1:exon
so has part: feature:1147897-1148369:1:exon
so has part: feature:1152689-1152803:1:exon
so has part: feature:1187312-1187510:1:exon
so has part: feature:1197238-1197343:1:exon
so has part: feature:1207072-1207268:1:exon
so has part: feature:1212234-1212400:1:exon
so has part: feature:1212938-1213098:1:exon

XP_032894508.1
type: Protein
SIO_000068: ncbiprotein

position:1136801:1
position: 1136801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1136801-1136972:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1147897-1148369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1152689-1152803:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1187312-1187510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1197238-1197343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207072-1207268:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1212234-1212400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1212938-1213098:1:exon

LOC116984869
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984869
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1228858..1229021
location: region:1228858-1229021:1
so has part: feature:1228858-1229021:1:exon
subclass of: SO_0000623

116984869
type: Gene
SIO_000068: ncbigene

position:1228858:1
position: 1228858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229021:1
position: 1229021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1228858-1229021:1:exon

LOC116984869
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snRNA
gene: LOC116984869
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004415145.1
SIO_010081: LOC116984869
subclass of: SO_0000673
so part of: LOC116984869
location: 1228858..1229021
location: region:1228858-1229021:1
so has part: feature:1228858-1229021:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1228858-1229021:1:exon

ccdc34
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ccdc34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1257208..1272582)
location: region:1257208-1272582:-1
so has part: feature:1257208-1272582:-1:exon
subclass of: SO_0000010

116984489
type: Gene
SIO_000068: ncbigene

position:1257208:-1
position: 1257208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272582:-1
position: 1272582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1257208-1272582:-1:exon

ccdc34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ccdc34
product: coiled-coil domain containing 34
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033038621.1
SIO_010081: ccdc34
subclass of: SO_0000673
so part of: ccdc34
location: complement(join(1257208..1257627,1262346..1262487,1263070..1263228,1264984..1265091,1265874..1266012,1267545..1267787,1270247..1270577,1272562..1272582))
location: region:1257208-1272582:-1
so has part: feature:1272562-1272582:-1:exon
so has part: feature:1270247-1270577:-1:exon
so has part: feature:1267545-1267787:-1:exon
so has part: feature:1265874-1266012:-1:exon
so has part: feature:1264984-1265091:-1:exon
so has part: feature:1263070-1263228:-1:exon
so has part: feature:1262346-1262487:-1:exon
so has part: feature:1257208-1257627:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1272562-1272582:-1:exon

position:1272562:-1
position: 1272562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1270247-1270577:-1:exon

position:1270247:-1
position: 1270247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270577:-1
position: 1270577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1267545-1267787:-1:exon

position:1267545:-1
position: 1267545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267787:-1
position: 1267787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1265874-1266012:-1:exon

position:1265874:-1
position: 1265874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1266012:-1
position: 1266012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1264984-1265091:-1:exon

position:1264984:-1
position: 1264984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265091:-1
position: 1265091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1263070-1263228:-1:exon

position:1263070:-1
position: 1263070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1263228:-1
position: 1263228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1262346-1262487:-1:exon

position:1262346:-1
position: 1262346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262487:-1
position: 1262487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1257208-1257627:-1:exon

position:1257627:-1
position: 1257627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ccdc34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ccdc34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 34
translation: MSSRSFDKIIEETNSQSGLFEQNNKLENDAELRSCELSSSSGSTSSLLSPIYHESYESEDEENESLNKQADRLQRGKSESTPRRREDSFLKGQVVSTPSGKKQSRKTIHLKRDASSKGCDLELSKSSTTSLLSPIYHDSYESEEGESEASQTPASSISNGEIASTANKTLTKKLAILTPVRSKTPRPRTSARKTKLSEEQQHLKEVELTAWEEWLIKKAKEERVELQKKSEQEMELKQVKLKEHEEFEKKKIRAEEEHKRWVQRKNEKEKLVKEEKLHKELEEKNVKEQERECAAGKASQRFQEWLKKKELQKMKMKKIEKDADEKKIVETQERKEKAEKVFREWVEKVKTRPRTAPSSFGYANGKLTGYYDGCSYPAPSYCNPIPWKPIPAPCSEDNIKKTTLKEKAKPKSTPLYIPHSNVAFRPKDNLLVGNGWRKAR
SIO_010081: ccdc34
subclass of: SO_0000673
so part of: ccdc34
location: complement(join(1257410..1257627,1262346..1262487,1263070..1263228,1264984..1265091,1265874..1266012,1267545..1267787,1270247..1270560))
location: region:1257410-1270560:-1
so has part: feature:1270247-1270560:-1:exon
so has part: feature:1267545-1267787:-1:exon
so has part: feature:1265874-1266012:-1:exon
so has part: feature:1264984-1265091:-1:exon
so has part: feature:1263070-1263228:-1:exon
so has part: feature:1262346-1262487:-1:exon
so has part: feature:1257410-1257627:-1:exon

XP_032894512.1
type: Protein
SIO_000068: ncbiprotein

position:1257410:-1
position: 1257410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270560:-1
position: 1270560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1270247-1270560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1267545-1267787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1265874-1266012:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1264984-1265091:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1263070-1263228:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1262346-1262487:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1257410-1257627:-1:exon

lgr4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: lgr4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1278939..1363537)
location: region:1278939-1363537:-1
so has part: feature:1278939-1363537:-1:exon
subclass of: SO_0000010

116984490
type: Gene
SIO_000068: ncbigene

position:1278939:-1
position: 1278939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363537:-1
position: 1363537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278939-1363537:-1:exon

lgr4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: lgr4
product: leucine rich repeat containing G protein-coupled receptor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033038622.1
SIO_010081: lgr4
subclass of: SO_0000673
so part of: lgr4
location: complement(join(1278939..1281039,1281557..1281631,1283960..1284081,1285539..1285664,1285968..1286039,1286497..1286568,1287762..1287827,1289425..1289496,1290520..1290591,1290688..1290759,1291372..1291440,1292511..1292582,1296747..1296962,1304334..1304405,1309087..1309158,1323987..1324058,1363099..1363537))
location: region:1278939-1363537:-1
so has part: feature:1363099-1363537:-1:exon
so has part: feature:1323987-1324058:-1:exon
so has part: feature:1309087-1309158:-1:exon
so has part: feature:1304334-1304405:-1:exon
so has part: feature:1296747-1296962:-1:exon
so has part: feature:1292511-1292582:-1:exon
so has part: feature:1291372-1291440:-1:exon
so has part: feature:1290688-1290759:-1:exon
so has part: feature:1290520-1290591:-1:exon
so has part: feature:1289425-1289496:-1:exon
so has part: feature:1287762-1287827:-1:exon
so has part: feature:1286497-1286568:-1:exon
so has part: feature:1285968-1286039:-1:exon
so has part: feature:1285539-1285664:-1:exon
so has part: feature:1283960-1284081:-1:exon
so has part: feature:1281557-1281631:-1:exon
so has part: feature:1278939-1281039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1363099-1363537:-1:exon

position:1363099:-1
position: 1363099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1323987-1324058:-1:exon

position:1323987:-1
position: 1323987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324058:-1
position: 1324058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1309087-1309158:-1:exon

position:1309087:-1
position: 1309087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1309158:-1
position: 1309158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1304334-1304405:-1:exon

position:1304334:-1
position: 1304334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304405:-1
position: 1304405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1296747-1296962:-1:exon

position:1296747:-1
position: 1296747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296962:-1
position: 1296962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1292511-1292582:-1:exon

position:1292511:-1
position: 1292511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292582:-1
position: 1292582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1291372-1291440:-1:exon

position:1291372:-1
position: 1291372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291440:-1
position: 1291440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1290688-1290759:-1:exon

position:1290688:-1
position: 1290688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290759:-1
position: 1290759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1290520-1290591:-1:exon

position:1290520:-1
position: 1290520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290591:-1
position: 1290591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1289425-1289496:-1:exon

position:1289425:-1
position: 1289425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1289496:-1
position: 1289496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1287762-1287827:-1:exon

position:1287762:-1
position: 1287762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287827:-1
position: 1287827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1286497-1286568:-1:exon

position:1286497:-1
position: 1286497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286568:-1
position: 1286568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1285968-1286039:-1:exon

position:1285968:-1
position: 1285968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286039:-1
position: 1286039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1285539-1285664:-1:exon

position:1285539:-1
position: 1285539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1285664:-1
position: 1285664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1283960-1284081:-1:exon

position:1283960:-1
position: 1283960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284081:-1
position: 1284081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1281557-1281631:-1:exon

position:1281557:-1
position: 1281557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1281631:-1
position: 1281631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1278939-1281039:-1:exon

position:1281039:-1
position: 1281039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lgr4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: lgr4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing G-protein coupled receptor 4
translation: MCRRCARWQRPGAGAAPGSRLLLQLLLLLWAGWSGGLAENVADPCPAVCLCRSERVDCSGRGLAAVPQGLGILTFFLDASMNNITELQPDSFQKLLYLEELRLAGNDLSYIHPEALSGLSQLKVLMLQNNQLKTVPSEALKGLSTLQSLRLDANHITSVPEDSFEGLIQLRHLWLDDNSLTQVPIYQLSKLPALQALTLALNKITHISNFAFVNLSSLVVLHLHNNKIDTLDIHCFDGLDNLETLDLNYNNLMEFPEAIKSLPHLKELAFHSNNIAVIPDKAFSGNPLLRTIHLYDNPILSVGISAFQNLSELQSLTLTGTRISRIPPDLCQQLKMLRFLDLSYNQIEELPSFHGCSALEEISLKHNEIKEIRADTFQGLVSLHFLDLSKNQISTIHKNALTSLLELTNLDLSSNQLHYFPTVGLEGLSQLKLSGNPALKELLKVKDLQNLRTLMVPYAYQCCAFSSCELQTANTEGIKSQEASISPLEKKTDQSADNEIKNDEEKIQPIVHCSPSPGAFKPCQHLLGSWMIRLTVWFIFLVALIFNTLVVVTTFASCTPLSSAKLFVGLIAAANLLMGIYTGTLTVLDSVSWGRFAQFGAWWETGCGCKVAGFLAMFSSEASIFFLTLASFERTMTARDLIKKGKSHRLTHFQVAAAFAVLFAAVIACLPLFHIGEFSASPLCLPFPTGESPSLGYTVTLVLLNSIAFLLMAVVYTKLYCNLEKEDLAETSQSSMIKHVAWLIFTNCIFFCPVAFFSFAPLISAISISPEIMKSVTLIFFPLPACLNPVLYVFFNPRFKEDWNMLRWRPKQKDKSIAVTMNSQSRCVTPEFFYECGMYSHLHGNLTVCDCCESLLLTKPSTCKHLVKSHSCPALAVVPCQRPSGYWSDCGTQSAHSEYADEGDSFVSDSSDQVQACGRACFYQSRGFPLVHYAYNSPRIKD
SIO_010081: lgr4
subclass of: SO_0000673
so part of: lgr4
location: complement(join(1279763..1281039,1281557..1281631,1283960..1284081,1285539..1285664,1285968..1286039,1286497..1286568,1287762..1287827,1289425..1289496,1290520..1290591,1290688..1290759,1291372..1291440,1292511..1292582,1296747..1296962,1304334..1304405,1309087..1309158,1323987..1324058,1363099..1363328))
location: region:1279763-1363328:-1
so has part: feature:1363099-1363328:-1:exon
so has part: feature:1323987-1324058:-1:exon
so has part: feature:1309087-1309158:-1:exon
so has part: feature:1304334-1304405:-1:exon
so has part: feature:1296747-1296962:-1:exon
so has part: feature:1292511-1292582:-1:exon
so has part: feature:1291372-1291440:-1:exon
so has part: feature:1290688-1290759:-1:exon
so has part: feature:1290520-1290591:-1:exon
so has part: feature:1289425-1289496:-1:exon
so has part: feature:1287762-1287827:-1:exon
so has part: feature:1286497-1286568:-1:exon
so has part: feature:1285968-1286039:-1:exon
so has part: feature:1285539-1285664:-1:exon
so has part: feature:1283960-1284081:-1:exon
so has part: feature:1281557-1281631:-1:exon
so has part: feature:1279763-1281039:-1:exon

XP_032894513.1
type: Protein
SIO_000068: ncbiprotein

position:1279763:-1
position: 1279763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363328:-1
position: 1363328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1363099-1363328:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1323987-1324058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1309087-1309158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1304334-1304405:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1296747-1296962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1292511-1292582:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1291372-1291440:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1290688-1290759:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1290520-1290591:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1289425-1289496:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1287762-1287827:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1286497-1286568:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1285968-1286039:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1285539-1285664:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1283960-1284081:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1281557-1281631:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1279763-1281039:-1:exon

LOC116984430
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984430
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1511348..1514712)
location: region:1511348-1514712:-1
so has part: feature:1511348-1514712:-1:exon
subclass of: SO_0000011

116984430
type: Gene
SIO_000068: ncbigene

position:1511348:-1
position: 1511348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514712:-1
position: 1514712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1511348-1514712:-1:exon

LOC116984430
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116984430
product: uncharacterized LOC116984430
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004415011.1
SIO_010081: LOC116984430
subclass of: SO_0000673
so part of: LOC116984430
location: complement(join(1511348..1511421,1514501..1514503,1514702..1514712))
location: region:1511348-1514712:-1
so has part: feature:1514702-1514712:-1:exon
so has part: feature:1514501-1514503:-1:exon
so has part: feature:1511348-1511421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1514702-1514712:-1:exon

position:1514702:-1
position: 1514702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1514501-1514503:-1:exon

position:1514501:-1
position: 1514501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514503:-1
position: 1514503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1511348-1511421:-1:exon

position:1511421:-1
position: 1511421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mettl15
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: mettl15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1741118..1789994)
location: region:1741118-1789994:-1
so has part: feature:1741118-1789994:-1:exon
subclass of: SO_0000010

116984491
type: Gene
SIO_000068: ncbigene

position:1741118:-1
position: 1741118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1789994:-1
position: 1789994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1741118-1789994:-1:exon

mettl15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: mettl15
product: methyltransferase like 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033038623.1
SIO_010081: mettl15
subclass of: SO_0000673
so part of: mettl15
location: complement(join(1741118..1741842,1754328..1754506,1756624..1756815,1776647..1776783,1789402..1789994))
location: region:1741118-1789994:-1
so has part: feature:1789402-1789994:-1:exon
so has part: feature:1776647-1776783:-1:exon
so has part: feature:1756624-1756815:-1:exon
so has part: feature:1754328-1754506:-1:exon
so has part: feature:1741118-1741842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1789402-1789994:-1:exon

position:1789402:-1
position: 1789402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1776647-1776783:-1:exon

position:1776647:-1
position: 1776647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1776783:-1
position: 1776783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1756624-1756815:-1:exon

position:1756624:-1
position: 1756624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756815:-1
position: 1756815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1754328-1754506:-1:exon

position:1754328:-1
position: 1754328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1754506:-1
position: 1754506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1741118-1741842:-1:exon

position:1741842:-1
position: 1741842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mettl15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: mettl15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 12S rRNA N4-methylcytidine (m4C) methyltransferase
translation: MHWGLVKHCLKASSVVGRGPFAVKCEQRCCPVGLFNMRCHQLPLARNIALSAALGARHPGTTLTATTCPTSTASHHELYLHKPVMVKEIVQHLSPKPGQVFLDMTFGAGGHTKAILSQAPDISVFALDRDPVAYGIAQQVSETYHGRIQPLLGRFSQLADLLAASGVEGDTFDGIVIDAGCSSMQFDTPCRGFALSQDGPLDMRMDGNRYPDMPSAADVVNALDQHSLASILRIYGEERHAKKIAAAVVQARSIYPITRTQQLASIVAGAFPGAATYARKDQLQRSAHVATKTFQALRIFVNDELNELLQGLKAADTFLKARGCLVALTFHSLEDRVVKRFLHNIDFSESPNLSARQKIRQGLRKEKDNVGTCLPQMKALVWSSIQKKVLTPDSEEIQANPRGRSAKLRAAIKL
SIO_010081: mettl15
subclass of: SO_0000673
so part of: mettl15
location: complement(join(1741403..1741842,1754328..1754506,1756624..1756815,1776647..1776783,1789402..1789698))
location: region:1741403-1789698:-1
so has part: feature:1789402-1789698:-1:exon
so has part: feature:1776647-1776783:-1:exon
so has part: feature:1756624-1756815:-1:exon
so has part: feature:1754328-1754506:-1:exon
so has part: feature:1741403-1741842:-1:exon

XP_032894514.1
type: Protein
SIO_000068: ncbiprotein

position:1741403:-1
position: 1741403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1789698:-1
position: 1789698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1789402-1789698:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1776647-1776783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1756624-1756815:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1754328-1754506:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1741403-1741842:-1:exon

kif18a
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: kif18a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1793559..1863289
location: region:1793559-1863289:1
so has part: feature:1793559-1863289:1:exon
subclass of: SO_0000010

116984493
type: Gene
SIO_000068: ncbigene

position:1793559:1
position: 1793559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863289:1
position: 1863289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1793559-1863289:1:exon

kif18a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kif18a
product: kinesin family member 18A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033038625.1
SIO_010081: kif18a
subclass of: SO_0000673
so part of: kif18a
location: join(1793559..1793678,1795053..1795429,1800398..1800555,1802664..1802768,1804720..1804830,1805440..1805637,1822651..1822827,1826127..1826201,1829206..1829291,1838934..1839096,1841757..1841921,1845169..1845290,1847455..1847693,1848563..1848646,1859013..1859493,1861035..1861133,1862114..1862214,1862953..1863289)
location: region:1793559-1863289:1
so has part: feature:1793559-1793678:1:exon
so has part: feature:1795053-1795429:1:exon
so has part: feature:1800398-1800555:1:exon
so has part: feature:1802664-1802768:1:exon
so has part: feature:1804720-1804830:1:exon
so has part: feature:1805440-1805637:1:exon
so has part: feature:1822651-1822827:1:exon
so has part: feature:1826127-1826201:1:exon
so has part: feature:1829206-1829291:1:exon
so has part: feature:1838934-1839096:1:exon
so has part: feature:1841757-1841921:1:exon
so has part: feature:1845169-1845290:1:exon
so has part: feature:1847455-1847693:1:exon
so has part: feature:1848563-1848646:1:exon
so has part: feature:1859013-1859493:1:exon
so has part: feature:1861035-1861133:1:exon
so has part: feature:1862114-1862214:1:exon
so has part: feature:1862953-1863289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1793559-1793678:1:exon

position:1793678:1
position: 1793678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1795053-1795429:1:exon

position:1795053:1
position: 1795053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1795429:1
position: 1795429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1800398-1800555:1:exon

position:1800398:1
position: 1800398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1800555:1
position: 1800555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1802664-1802768:1:exon

position:1802664:1
position: 1802664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1802768:1
position: 1802768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1804720-1804830:1:exon

position:1804720:1
position: 1804720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1804830:1
position: 1804830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1805440-1805637:1:exon

position:1805440:1
position: 1805440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1805637:1
position: 1805637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1822651-1822827:1:exon

position:1822651:1
position: 1822651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1822827:1
position: 1822827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1826127-1826201:1:exon

position:1826127:1
position: 1826127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1826201:1
position: 1826201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1829206-1829291:1:exon

position:1829206:1
position: 1829206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1829291:1
position: 1829291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1838934-1839096:1:exon

position:1838934:1
position: 1838934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1839096:1
position: 1839096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1841757-1841921:1:exon

position:1841757:1
position: 1841757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1841921:1
position: 1841921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1845169-1845290:1:exon

position:1845169:1
position: 1845169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1845290:1
position: 1845290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1847455-1847693:1:exon

position:1847455:1
position: 1847455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1847693:1
position: 1847693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1848563-1848646:1:exon

position:1848563:1
position: 1848563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1848646:1
position: 1848646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1859013-1859493:1:exon

position:1859013:1
position: 1859013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1859493:1
position: 1859493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1861035-1861133:1:exon

position:1861035:1
position: 1861035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1861133:1
position: 1861133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1862114-1862214:1:exon

position:1862114:1
position: 1862114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1862214:1
position: 1862214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1862953-1863289:1:exon

position:1862953:1
position: 1862953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

kif18a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kif18a
product: kinesin family member 18A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033038626.1
SIO_010081: kif18a
subclass of: SO_0000673
so part of: kif18a
location: join(1793559..1793660,1795053..1795429,1800398..1800555,1802664..1802768,1804720..1804830,1805440..1805637,1822651..1822827,1826127..1826201,1829206..1829291,1838934..1839096,1841757..1841921,1845169..1845290,1847455..1847693,1848563..1848646,1859013..1859493,1861035..1861133,1862114..1862214,1862953..1863289)
location: region:1793559-1863289:1
so has part: feature:1793559-1793660:1:exon
so has part: feature:1795053-1795429:1:exon
so has part: feature:1800398-1800555:1:exon
so has part: feature:1802664-1802768:1:exon
so has part: feature:1804720-1804830:1:exon
so has part: feature:1805440-1805637:1:exon
so has part: feature:1822651-1822827:1:exon
so has part: feature:1826127-1826201:1:exon
so has part: feature:1829206-1829291:1:exon
so has part: feature:1838934-1839096:1:exon
so has part: feature:1841757-1841921:1:exon
so has part: feature:1845169-1845290:1:exon
so has part: feature:1847455-1847693:1:exon
so has part: feature:1848563-1848646:1:exon
so has part: feature:1859013-1859493:1:exon
so has part: feature:1861035-1861133:1:exon
so has part: feature:1862114-1862214:1:exon
so has part: feature:1862953-1863289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1793559-1793660:1:exon

position:1793660:1
position: 1793660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1795053-1795429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800398-1800555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1802664-1802768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1804720-1804830:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1805440-1805637:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1822651-1822827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1826127-1826201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1829206-1829291:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1838934-1839096:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1841757-1841921:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1845169-1845290:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1847455-1847693:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1848563-1848646:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1859013-1859493:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1861035-1861133:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1862114-1862214:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1862953-1863289:1:exon

kif18a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kif18a
product: kinesin family member 18A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033038624.1
SIO_010081: kif18a
subclass of: SO_0000673
so part of: kif18a
location: join(1793563..1793665,1795053..1795429,1800398..1800555,1802664..1802768,1804720..1804830,1805440..1805637,1822651..1822827,1826127..1826201,1829206..1829291,1838934..1839096,1841757..1841921,1845169..1845290,1847455..1847693,1848563..1848646,1859013..1859493,1861035..1861133,1862114..1862214,1862953..1863289)
location: region:1793563-1863289:1
so has part: feature:1793563-1793665:1:exon
so has part: feature:1795053-1795429:1:exon
so has part: feature:1800398-1800555:1:exon
so has part: feature:1802664-1802768:1:exon
so has part: feature:1804720-1804830:1:exon
so has part: feature:1805440-1805637:1:exon
so has part: feature:1822651-1822827:1:exon
so has part: feature:1826127-1826201:1:exon
so has part: feature:1829206-1829291:1:exon
so has part: feature:1838934-1839096:1:exon
so has part: feature:1841757-1841921:1:exon
so has part: feature:1845169-1845290:1:exon
so has part: feature:1847455-1847693:1:exon
so has part: feature:1848563-1848646:1:exon
so has part: feature:1859013-1859493:1:exon
so has part: feature:1861035-1861133:1:exon
so has part: feature:1862114-1862214:1:exon
so has part: feature:1862953-1863289:1:exon

position:1793563:1
position: 1793563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1793563-1793665:1:exon

position:1793665:1
position: 1793665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1795053-1795429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800398-1800555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1802664-1802768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1804720-1804830:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1805440-1805637:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1822651-1822827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1826127-1826201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1829206-1829291:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1838934-1839096:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1841757-1841921:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1845169-1845290:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1847455-1847693:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1848563-1848646:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1859013-1859493:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1861035-1861133:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1862114-1862214:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1862953-1863289:1:exon

kif18a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kif18a
product: kinesin family member 18A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033038627.1
SIO_010081: kif18a
subclass of: SO_0000673
so part of: kif18a
location: join(1794939..1795429,1800398..1800555,1802664..1802768,1804720..1804830,1805440..1805637,1822651..1822827,1826127..1826201,1829206..1829291,1838934..1839096,1841757..1841921,1845169..1845290,1847455..1847693,1848563..1848646,1859013..1859493,1861035..1861133,1862114..1862215,1862955..1863289)
location: region:1794939-1863289:1
so has part: feature:1794939-1795429:1:exon
so has part: feature:1800398-1800555:1:exon
so has part: feature:1802664-1802768:1:exon
so has part: feature:1804720-1804830:1:exon
so has part: feature:1805440-1805637:1:exon
so has part: feature:1822651-1822827:1:exon
so has part: feature:1826127-1826201:1:exon
so has part: feature:1829206-1829291:1:exon
so has part: feature:1838934-1839096:1:exon
so has part: feature:1841757-1841921:1:exon
so has part: feature:1845169-1845290:1:exon
so has part: feature:1847455-1847693:1:exon
so has part: feature:1848563-1848646:1:exon
so has part: feature:1859013-1859493:1:exon
so has part: feature:1861035-1861133:1:exon
so has part: feature:1862114-1862215:1:exon
so has part: feature:1862955-1863289:1:exon

position:1794939:1
position: 1794939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1794939-1795429:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800398-1800555:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1802664-1802768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1804720-1804830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805440-1805637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1822651-1822827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1826127-1826201:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1829206-1829291:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1838934-1839096:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1841757-1841921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1845169-1845290:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1847455-1847693:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1848563-1848646:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1859013-1859493:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1861035-1861133:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1862114-1862215:1:exon

position:1862215:1
position: 1862215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1862955-1863289:1:exon

position:1862955:1
position: 1862955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

kif18a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kif18a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF18A isoform X1
translation: MSSTDYVCNHVKVFIRVRPENAREKNGKHRKVVHVVDKHMLIFDPKEDEIGFFYRSKVQRRYLSNKNKDLQFIFDRVFDANSSQSDIFEETKSILESVFNGYNCTVFAYGATGSGKTHTMLGSSEKPGVMYLTMKEMYDRIERLKNEKSCDVAVSYLEVYNEEVRDLLANSRSLAVREDAQNGVVIQGLTLHKPSSSKQLLQMLDYGNKNRTQHPTDANSNSSRSHAVFQIYLRQQDRTANINQNIKIAKMCLVDLAGSERISSMNMKAARFREGANINRSLLALGNVINALTDSKKKIQHIPYRNSKLTRLLKDSLGGNCQTIMIAAISPSSVSFEDTYNTLKYANRAKDIKSSIKSNVLNLNYHVGKYAQICEEQRQEIMELKDKLKAYERENILLGINPKESEIKRFEEVLEDIFLKRQKVRISCLDLELKMKEAEQLTFYYKQCQQHARLFPCEPATERASCKYERKLAALKTQHYHILQKIKTMEKMLEENSNWLHRVENEMCLLGQDGKTPQVLKQELQRCRLKMEVMDLKHQIQHMAQLFCLQKPVNRRTEKLTNILLPAFHQQYQTLKRAGLVSATAQDTFAEVEQLLKDENGKVWEDQITELPEQISDRLNIASIMNFSQFAYCQATPCNSTKSGSAHKATTEVKKNTSPDPLKPSIESKENPPSMKKEGRILTCKTSRRRLEQSLTCSSLVDRATPAPCSAQQDDLLIKEGFASISYTPEACRDTDHVPCQLPSTGVLFHKAGCHVEALEKDLSDVENSVPGKEDENVTSVAYDSEESRQSALGARTQHPFPSETDTVTDHILSRKQSTHHKSFLQRLGLPSLLSTSETNGKPSYMSLTSAARRKRKSAGIPPKAMSNLGLSCKQKTFAYKMCRPVAIHQPHGKGNPTATWPEAVTLMTETSFTKAS
SIO_010081: kif18a
subclass of: SO_0000673
so part of: kif18a
location: join(1795114..1795429,1800398..1800555,1802664..1802768,1804720..1804830,1805440..1805637,1822651..1822827,1826127..1826201,1829206..1829291,1838934..1839096,1841757..1841921,1845169..1845290,1847455..1847693,1848563..1848646,1859013..1859493,1861035..1861133,1862114..1862214,1862953..1863026)
location: region:1795114-1863026:1
so has part: feature:1795114-1795429:1:exon
so has part: feature:1800398-1800555:1:exon
so has part: feature:1802664-1802768:1:exon
so has part: feature:1804720-1804830:1:exon
so has part: feature:1805440-1805637:1:exon
so has part: feature:1822651-1822827:1:exon
so has part: feature:1826127-1826201:1:exon
so has part: feature:1829206-1829291:1:exon
so has part: feature:1838934-1839096:1:exon
so has part: feature:1841757-1841921:1:exon
so has part: feature:1845169-1845290:1:exon
so has part: feature:1847455-1847693:1:exon
so has part: feature:1848563-1848646:1:exon
so has part: feature:1859013-1859493:1:exon
so has part: feature:1861035-1861133:1:exon
so has part: feature:1862114-1862214:1:exon
so has part: feature:1862953-1863026:1:exon

XP_032894515.1
type: Protein
SIO_000068: ncbiprotein

position:1795114:1
position: 1795114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863026:1
position: 1863026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1795114-1795429:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800398-1800555:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1802664-1802768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1804720-1804830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805440-1805637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1822651-1822827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1826127-1826201:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1829206-1829291:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1838934-1839096:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1841757-1841921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1845169-1845290:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1847455-1847693:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1848563-1848646:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1859013-1859493:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1861035-1861133:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1862114-1862214:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1862953-1863026:1:exon

kif18a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kif18a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF18A isoform X1
translation: MSSTDYVCNHVKVFIRVRPENAREKNGKHRKVVHVVDKHMLIFDPKEDEIGFFYRSKVQRRYLSNKNKDLQFIFDRVFDANSSQSDIFEETKSILESVFNGYNCTVFAYGATGSGKTHTMLGSSEKPGVMYLTMKEMYDRIERLKNEKSCDVAVSYLEVYNEEVRDLLANSRSLAVREDAQNGVVIQGLTLHKPSSSKQLLQMLDYGNKNRTQHPTDANSNSSRSHAVFQIYLRQQDRTANINQNIKIAKMCLVDLAGSERISSMNMKAARFREGANINRSLLALGNVINALTDSKKKIQHIPYRNSKLTRLLKDSLGGNCQTIMIAAISPSSVSFEDTYNTLKYANRAKDIKSSIKSNVLNLNYHVGKYAQICEEQRQEIMELKDKLKAYERENILLGINPKESEIKRFEEVLEDIFLKRQKVRISCLDLELKMKEAEQLTFYYKQCQQHARLFPCEPATERASCKYERKLAALKTQHYHILQKIKTMEKMLEENSNWLHRVENEMCLLGQDGKTPQVLKQELQRCRLKMEVMDLKHQIQHMAQLFCLQKPVNRRTEKLTNILLPAFHQQYQTLKRAGLVSATAQDTFAEVEQLLKDENGKVWEDQITELPEQISDRLNIASIMNFSQFAYCQATPCNSTKSGSAHKATTEVKKNTSPDPLKPSIESKENPPSMKKEGRILTCKTSRRRLEQSLTCSSLVDRATPAPCSAQQDDLLIKEGFASISYTPEACRDTDHVPCQLPSTGVLFHKAGCHVEALEKDLSDVENSVPGKEDENVTSVAYDSEESRQSALGARTQHPFPSETDTVTDHILSRKQSTHHKSFLQRLGLPSLLSTSETNGKPSYMSLTSAARRKRKSAGIPPKAMSNLGLSCKQKTFAYKMCRPVAIHQPHGKGNPTATWPEAVTLMTETSFTKAS
SIO_010081: kif18a
subclass of: SO_0000673
so part of: kif18a
location: join(1795114..1795429,1800398..1800555,1802664..1802768,1804720..1804830,1805440..1805637,1822651..1822827,1826127..1826201,1829206..1829291,1838934..1839096,1841757..1841921,1845169..1845290,1847455..1847693,1848563..1848646,1859013..1859493,1861035..1861133,1862114..1862214,1862953..1863026)
location: region:1795114-1863026:1
so has part: feature:1795114-1795429:1:exon
so has part: feature:1800398-1800555:1:exon
so has part: feature:1802664-1802768:1:exon
so has part: feature:1804720-1804830:1:exon
so has part: feature:1805440-1805637:1:exon
so has part: feature:1822651-1822827:1:exon
so has part: feature:1826127-1826201:1:exon
so has part: feature:1829206-1829291:1:exon
so has part: feature:1838934-1839096:1:exon
so has part: feature:1841757-1841921:1:exon
so has part: feature:1845169-1845290:1:exon
so has part: feature:1847455-1847693:1:exon
so has part: feature:1848563-1848646:1:exon
so has part: feature:1859013-1859493:1:exon
so has part: feature:1861035-1861133:1:exon
so has part: feature:1862114-1862214:1:exon
so has part: feature:1862953-1863026:1:exon

XP_032894516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1795114-1795429:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800398-1800555:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1802664-1802768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1804720-1804830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805440-1805637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1822651-1822827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1826127-1826201:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1829206-1829291:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1838934-1839096:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1841757-1841921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1845169-1845290:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1847455-1847693:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1848563-1848646:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1859013-1859493:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1861035-1861133:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1862114-1862214:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1862953-1863026:1:exon

kif18a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kif18a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF18A isoform X1
translation: MSSTDYVCNHVKVFIRVRPENAREKNGKHRKVVHVVDKHMLIFDPKEDEIGFFYRSKVQRRYLSNKNKDLQFIFDRVFDANSSQSDIFEETKSILESVFNGYNCTVFAYGATGSGKTHTMLGSSEKPGVMYLTMKEMYDRIERLKNEKSCDVAVSYLEVYNEEVRDLLANSRSLAVREDAQNGVVIQGLTLHKPSSSKQLLQMLDYGNKNRTQHPTDANSNSSRSHAVFQIYLRQQDRTANINQNIKIAKMCLVDLAGSERISSMNMKAARFREGANINRSLLALGNVINALTDSKKKIQHIPYRNSKLTRLLKDSLGGNCQTIMIAAISPSSVSFEDTYNTLKYANRAKDIKSSIKSNVLNLNYHVGKYAQICEEQRQEIMELKDKLKAYERENILLGINPKESEIKRFEEVLEDIFLKRQKVRISCLDLELKMKEAEQLTFYYKQCQQHARLFPCEPATERASCKYERKLAALKTQHYHILQKIKTMEKMLEENSNWLHRVENEMCLLGQDGKTPQVLKQELQRCRLKMEVMDLKHQIQHMAQLFCLQKPVNRRTEKLTNILLPAFHQQYQTLKRAGLVSATAQDTFAEVEQLLKDENGKVWEDQITELPEQISDRLNIASIMNFSQFAYCQATPCNSTKSGSAHKATTEVKKNTSPDPLKPSIESKENPPSMKKEGRILTCKTSRRRLEQSLTCSSLVDRATPAPCSAQQDDLLIKEGFASISYTPEACRDTDHVPCQLPSTGVLFHKAGCHVEALEKDLSDVENSVPGKEDENVTSVAYDSEESRQSALGARTQHPFPSETDTVTDHILSRKQSTHHKSFLQRLGLPSLLSTSETNGKPSYMSLTSAARRKRKSAGIPPKAMSNLGLSCKQKTFAYKMCRPVAIHQPHGKGNPTATWPEAVTLMTETSFTKAS
SIO_010081: kif18a
subclass of: SO_0000673
so part of: kif18a
location: join(1795114..1795429,1800398..1800555,1802664..1802768,1804720..1804830,1805440..1805637,1822651..1822827,1826127..1826201,1829206..1829291,1838934..1839096,1841757..1841921,1845169..1845290,1847455..1847693,1848563..1848646,1859013..1859493,1861035..1861133,1862114..1862214,1862953..1863026)
location: region:1795114-1863026:1
so has part: feature:1795114-1795429:1:exon
so has part: feature:1800398-1800555:1:exon
so has part: feature:1802664-1802768:1:exon
so has part: feature:1804720-1804830:1:exon
so has part: feature:1805440-1805637:1:exon
so has part: feature:1822651-1822827:1:exon
so has part: feature:1826127-1826201:1:exon
so has part: feature:1829206-1829291:1:exon
so has part: feature:1838934-1839096:1:exon
so has part: feature:1841757-1841921:1:exon
so has part: feature:1845169-1845290:1:exon
so has part: feature:1847455-1847693:1:exon
so has part: feature:1848563-1848646:1:exon
so has part: feature:1859013-1859493:1:exon
so has part: feature:1861035-1861133:1:exon
so has part: feature:1862114-1862214:1:exon
so has part: feature:1862953-1863026:1:exon

XP_032894517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1795114-1795429:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800398-1800555:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1802664-1802768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1804720-1804830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805440-1805637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1822651-1822827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1826127-1826201:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1829206-1829291:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1838934-1839096:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1841757-1841921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1845169-1845290:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1847455-1847693:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1848563-1848646:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1859013-1859493:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1861035-1861133:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1862114-1862214:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1862953-1863026:1:exon

kif18a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kif18a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF18A isoform X2
translation: MSSTDYVCNHVKVFIRVRPENAREKNGKHRKVVHVVDKHMLIFDPKEDEIGFFYRSKVQRRYLSNKNKDLQFIFDRVFDANSSQSDIFEETKSILESVFNGYNCTVFAYGATGSGKTHTMLGSSEKPGVMYLTMKEMYDRIERLKNEKSCDVAVSYLEVYNEEVRDLLANSRSLAVREDAQNGVVIQGLTLHKPSSSKQLLQMLDYGNKNRTQHPTDANSNSSRSHAVFQIYLRQQDRTANINQNIKIAKMCLVDLAGSERISSMNMKAARFREGANINRSLLALGNVINALTDSKKKIQHIPYRNSKLTRLLKDSLGGNCQTIMIAAISPSSVSFEDTYNTLKYANRAKDIKSSIKSNVLNLNYHVGKYAQICEEQRQEIMELKDKLKAYERENILLGINPKESEIKRFEEVLEDIFLKRQKVRISCLDLELKMKEAEQLTFYYKQCQQHARLFPCEPATERASCKYERKLAALKTQHYHILQKIKTMEKMLEENSNWLHRVENEMCLLGQDGKTPQVLKQELQRCRLKMEVMDLKHQIQHMAQLFCLQKPVNRRTEKLTNILLPAFHQQYQTLKRAGLVSATAQDTFAEVEQLLKDENGKVWEDQITELPEQISDRLNIASIMNFSQFAYCQATPCNSTKSGSAHKATTEVKKNTSPDPLKPSIESKENPPSMKKEGRILTCKTSRRRLEQSLTCSSLVDRATPAPCSAQQDDLLIKEGFASISYTPEACRDTDHVPCQLPSTGVLFHKAGCHVEALEKDLSDVENSVPGKEDENVTSVAYDSEESRQSALGARTQHPFPSETDTVTDHILSRKQSTHHKSFLQRLGLPSLLSTSETNGKPSYMSLTSAARRKRKSAGIPPKAMSNLGLSCKQKTFAYKMCRPVAIHQPHGKAIPQLLGQKQSR
SIO_010081: kif18a
subclass of: SO_0000673
so part of: kif18a
location: join(1795114..1795429,1800398..1800555,1802664..1802768,1804720..1804830,1805440..1805637,1822651..1822827,1826127..1826201,1829206..1829291,1838934..1839096,1841757..1841921,1845169..1845290,1847455..1847693,1848563..1848646,1859013..1859493,1861035..1861133,1862114..1862215,1862955..1862994)
location: region:1795114-1862994:1
so has part: feature:1795114-1795429:1:exon
so has part: feature:1800398-1800555:1:exon
so has part: feature:1802664-1802768:1:exon
so has part: feature:1804720-1804830:1:exon
so has part: feature:1805440-1805637:1:exon
so has part: feature:1822651-1822827:1:exon
so has part: feature:1826127-1826201:1:exon
so has part: feature:1829206-1829291:1:exon
so has part: feature:1838934-1839096:1:exon
so has part: feature:1841757-1841921:1:exon
so has part: feature:1845169-1845290:1:exon
so has part: feature:1847455-1847693:1:exon
so has part: feature:1848563-1848646:1:exon
so has part: feature:1859013-1859493:1:exon
so has part: feature:1861035-1861133:1:exon
so has part: feature:1862114-1862215:1:exon
so has part: feature:1862955-1862994:1:exon

XP_032894518.1
type: Protein
SIO_000068: ncbiprotein

position:1862994:1
position: 1862994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1795114-1795429:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800398-1800555:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1802664-1802768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1804720-1804830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805440-1805637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1822651-1822827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1826127-1826201:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1829206-1829291:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1838934-1839096:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1841757-1841921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1845169-1845290:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1847455-1847693:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1848563-1848646:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1859013-1859493:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1861035-1861133:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1862114-1862215:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1862955-1862994:1:exon

lrp4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: lrp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1959688..2163641
location: region:1959688-2163641:1
so has part: feature:1959688-2163641:1:exon
subclass of: SO_0000010

116984494
type: Gene
SIO_000068: ncbigene

position:1959688:1
position: 1959688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2163641:1
position: 2163641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1959688-2163641:1:exon

lrp4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: lrp4
product: LDL receptor related protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033038628.1
SIO_010081: lrp4
subclass of: SO_0000673
so part of: lrp4
location: join(1959688..1960153,2045122..2045274,2065010..2065126,2080691..2080804,2081668..2081784,2088482..2088610,2095796..2095915,2096576..2096701,2099492..2099617,2100642..2100776,2101687..2101812,2102395..2102625,2104516..2104672,2108009..2108226,2110193..2110369,2111159..2111284,2117353..2117561,2119126..2119207,2119415..2119520,2121181..2121382,2122207..2122396,2123957..2124088,2125014..2125154,2125935..2126021,2126854..2127025,2128719..2128881,2130291..2130516,2132757..2133060,2134040..2134258,2135341..2135475,2137301..2137409,2140948..2141092,2144397..2144510,2145929..2146058,2149889..2149959,2153542..2153629,2154984..2155125,2162295..2163641)
location: region:1959688-2163641:1
so has part: feature:1959688-1960153:1:exon
so has part: feature:2045122-2045274:1:exon
so has part: feature:2065010-2065126:1:exon
so has part: feature:2080691-2080804:1:exon
so has part: feature:2081668-2081784:1:exon
so has part: feature:2088482-2088610:1:exon
so has part: feature:2095796-2095915:1:exon
so has part: feature:2096576-2096701:1:exon
so has part: feature:2099492-2099617:1:exon
so has part: feature:2100642-2100776:1:exon
so has part: feature:2101687-2101812:1:exon
so has part: feature:2102395-2102625:1:exon
so has part: feature:2104516-2104672:1:exon
so has part: feature:2108009-2108226:1:exon
so has part: feature:2110193-2110369:1:exon
so has part: feature:2111159-2111284:1:exon
so has part: feature:2117353-2117561:1:exon
so has part: feature:2119126-2119207:1:exon
so has part: feature:2119415-2119520:1:exon
so has part: feature:2121181-2121382:1:exon
so has part: feature:2122207-2122396:1:exon
so has part: feature:2123957-2124088:1:exon
so has part: feature:2125014-2125154:1:exon
so has part: feature:2125935-2126021:1:exon
so has part: feature:2126854-2127025:1:exon
so has part: feature:2128719-2128881:1:exon
so has part: feature:2130291-2130516:1:exon
so has part: feature:2132757-2133060:1:exon
so has part: feature:2134040-2134258:1:exon
so has part: feature:2135341-2135475:1:exon
so has part: feature:2137301-2137409:1:exon
so has part: feature:2140948-2141092:1:exon
so has part: feature:2144397-2144510:1:exon
so has part: feature:2145929-2146058:1:exon
so has part: feature:2149889-2149959:1:exon
so has part: feature:2153542-2153629:1:exon
so has part: feature:2154984-2155125:1:exon
so has part: feature:2162295-2163641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1959688-1960153:1:exon

position:1960153:1
position: 1960153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2045122-2045274:1:exon

position:2045122:1
position: 2045122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2045274:1
position: 2045274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2065010-2065126:1:exon

position:2065010:1
position: 2065010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2065126:1
position: 2065126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2080691-2080804:1:exon

position:2080691:1
position: 2080691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2080804:1
position: 2080804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2081668-2081784:1:exon

position:2081668:1
position: 2081668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2081784:1
position: 2081784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2088482-2088610:1:exon

position:2088482:1
position: 2088482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2088610:1
position: 2088610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2095796-2095915:1:exon

position:2095796:1
position: 2095796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2095915:1
position: 2095915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2096576-2096701:1:exon

position:2096576:1
position: 2096576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2096701:1
position: 2096701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2099492-2099617:1:exon

position:2099492:1
position: 2099492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2099617:1
position: 2099617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2100642-2100776:1:exon

position:2100642:1
position: 2100642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2100776:1
position: 2100776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2101687-2101812:1:exon

position:2101687:1
position: 2101687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2101812:1
position: 2101812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2102395-2102625:1:exon

position:2102395:1
position: 2102395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2102625:1
position: 2102625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2104516-2104672:1:exon

position:2104516:1
position: 2104516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2104672:1
position: 2104672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2108009-2108226:1:exon

position:2108009:1
position: 2108009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2108226:1
position: 2108226
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urn:…
SIO_000300: 15
SIO_000628: feature:2110193-2110369:1:exon

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reference: sequence
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:2117353-2117561:1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:2119126-2119207:1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:2119415-2119520:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:2119520:1
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:2121181-2121382:1:exon

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reference: sequence
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position:2121382:1
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urn:…
SIO_000300: 21
SIO_000628: feature:2122207-2122396:1:exon

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reference: sequence
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position:2122396:1
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urn:…
SIO_000300: 22
SIO_000628: feature:2123957-2124088:1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:2125014-2125154:1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:2125935-2126021:1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:2126854-2127025:1:exon

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urn:…
SIO_000300: 26
SIO_000628: feature:2128719-2128881:1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:2130291-2130516:1:exon

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urn:…
SIO_000300: 28
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urn:…
SIO_000300: 29
SIO_000628: feature:2134040-2134258:1:exon

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reference: sequence
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urn:…
SIO_000300: 30
SIO_000628: feature:2135341-2135475:1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:2137301-2137409:1:exon

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urn:…
SIO_000300: 32
SIO_000628: feature:2140948-2141092:1:exon

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urn:…
SIO_000300: 33
SIO_000628: feature:2144397-2144510:1:exon

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urn:…
SIO_000300: 34
SIO_000628: feature:2145929-2146058:1:exon

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reference: sequence
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urn:…
SIO_000300: 35
SIO_000628: feature:2149889-2149959:1:exon

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reference: sequence
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urn:…
SIO_000300: 36
SIO_000628: feature:2153542-2153629:1:exon

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urn:…
SIO_000300: 37
SIO_000628: feature:2154984-2155125:1:exon

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urn:…
SIO_000300: 38
SIO_000628: feature:2162295-2163641:1:exon

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reference: sequence
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lrp4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: lrp4
product: LDL receptor related protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033038629.1
SIO_010081: lrp4
subclass of: SO_0000673
so part of: lrp4
location: join(1959688..1960153,2045122..2045274,2065010..2065126,2080691..2080804,2081668..2081784,2088482..2088610,2095796..2095915,2096576..2096701,2099492..2099617,2100642..2100776,2101687..2101812,2102395..2102625,2104516..2104672,2108009..2108226,2110193..2110369,2111162..2111284,2117353..2117561,2119126..2119207,2119415..2119520,2121181..2121382,2122207..2122396,2123957..2124088,2125014..2125154,2125935..2126021,2126854..2127025,2128719..2128881,2130291..2130516,2132757..2133060,2134040..2134258,2135341..2135475,2137301..2137409,2140948..2141092,2144397..2144510,2145929..2146058,2149889..2149959,2153542..2153629,2154984..2155125,2162295..2163641)
location: region:1959688-2163641:1
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so has part: feature:2149889-2149959:1:exon
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so has part: feature:2154984-2155125:1:exon
so has part: feature:2162295-2163641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1959688-1960153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2045122-2045274:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2065010-2065126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2080691-2080804:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2081668-2081784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2088482-2088610:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2095796-2095915:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2096576-2096701:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2099492-2099617:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2100642-2100776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2101687-2101812:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2102395-2102625:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2104516-2104672:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2108009-2108226:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2110193-2110369:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2111162-2111284:1:exon

position:2111162:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2117353-2117561:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2119126-2119207:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2119415-2119520:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2121181-2121382:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2122207-2122396:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2123957-2124088:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2125014-2125154:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2125935-2126021:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2126854-2127025:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2128719-2128881:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2130291-2130516:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2132757-2133060:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2134040-2134258:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2135341-2135475:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2137301-2137409:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2140948-2141092:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2144397-2144510:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2145929-2146058:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2149889-2149959:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2153542-2153629:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2154984-2155125:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2162295-2163641:1:exon

lrp4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: lrp4
product: LDL receptor related protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033038630.1
SIO_010081: lrp4
subclass of: SO_0000673
so part of: lrp4
location: join(1959688..1960153,2045122..2045274,2065010..2065126,2080691..2080804,2081668..2081784,2088482..2088610,2095796..2095915,2096576..2096701,2099492..2099617,2100642..2100776,2101687..2101812,2102395..2102625,2104516..2104672,2108009..2108226,2110193..2110369,2111159..2111284,2117353..2117561,2119126..2119207,2119415..2119520,2121181..2121382,2122207..2122396,2123957..2124088,2125014..2125154,2125935..2126021,2126854..2127025,2128719..2128881,2130291..2130516,2132757..2133060,2134040..2134258,2135341..2135475,2137301..2137409,2140948..2141092,2144397..2144510,2145929..2146058,2149889..2149959,2153542..2153629,2154984..2155125,2159489..2159554,2162295..2162405)
location: region:1959688-2162405:1
so has part: feature:1959688-1960153:1:exon
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position:2162405:1
position: 2162405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1959688-1960153:1:exon

urn:…
SIO_000300: 2
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SIO_000300: 3
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SIO_000628: feature:2102395-2102625:1:exon

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SIO_000300: 15
SIO_000628: feature:2110193-2110369:1:exon

urn:…
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SIO_000628: feature:2111159-2111284:1:exon

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SIO_000628: feature:2119126-2119207:1:exon

urn:…
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SIO_000628: feature:2119415-2119520:1:exon

urn:…
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urn:…
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urn:…
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SIO_000300: 35
SIO_000628: feature:2149889-2149959:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2153542-2153629:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2154984-2155125:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2159489-2159554:1:exon

position:2159489:1
position: 2159489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2159554:1
position: 2159554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2162295-2162405:1:exon

lrp4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: lrp4
product: LDL receptor related protein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033038631.1
SIO_010081: lrp4
subclass of: SO_0000673
so part of: lrp4
location: join(1959688..1960153,2045122..2045274,2065010..2065126,2080691..2080804,2081668..2081784,2088482..2088610,2095796..2095915,2096576..2096701,2099492..2099617,2100642..2100776,2101687..2101812,2102395..2102625,2104516..2104672,2108009..2108226,2110193..2110369,2111159..2111284,2117353..2117561,2119126..2119207,2119415..2119520,2121181..2121382,2122207..2122396,2123957..2124088,2125014..2125154,2125935..2126021,2126854..2127025,2128719..2128881,2130291..2130516,2132757..2133060,2134040..2134258,2135341..2135475,2137301..2137409,2140948..2141092,2144397..2144510,2145929..2146058,2149889..2149959,2153542..2153629,2154984..2155125,2159489..2159554,2161624..2162276)
location: region:1959688-2162276:1
so has part: feature:1959688-1960153:1:exon
so has part: feature:2045122-2045274:1:exon
so has part: feature:2065010-2065126:1:exon
so has part: feature:2080691-2080804:1:exon
so has part: feature:2081668-2081784:1:exon
so has part: feature:2088482-2088610:1:exon
so has part: feature:2095796-2095915:1:exon
so has part: feature:2096576-2096701:1:exon
so has part: feature:2099492-2099617:1:exon
so has part: feature:2100642-2100776:1:exon
so has part: feature:2101687-2101812:1:exon
so has part: feature:2102395-2102625:1:exon
so has part: feature:2104516-2104672:1:exon
so has part: feature:2108009-2108226:1:exon
so has part: feature:2110193-2110369:1:exon
so has part: feature:2111159-2111284:1:exon
so has part: feature:2117353-2117561:1:exon
so has part: feature:2119126-2119207:1:exon
so has part: feature:2119415-2119520:1:exon
so has part: feature:2121181-2121382:1:exon
so has part: feature:2122207-2122396:1:exon
so has part: feature:2123957-2124088:1:exon
so has part: feature:2125014-2125154:1:exon
so has part: feature:2125935-2126021:1:exon
so has part: feature:2126854-2127025:1:exon
so has part: feature:2128719-2128881:1:exon
so has part: feature:2130291-2130516:1:exon
so has part: feature:2132757-2133060:1:exon
so has part: feature:2134040-2134258:1:exon
so has part: feature:2135341-2135475:1:exon
so has part: feature:2137301-2137409:1:exon
so has part: feature:2140948-2141092:1:exon
so has part: feature:2144397-2144510:1:exon
so has part: feature:2145929-2146058:1:exon
so has part: feature:2149889-2149959:1:exon
so has part: feature:2153542-2153629:1:exon
so has part: feature:2154984-2155125:1:exon
so has part: feature:2159489-2159554:1:exon
so has part: feature:2161624-2162276:1:exon

position:2162276:1
position: 2162276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1959688-1960153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2045122-2045274:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2065010-2065126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2080691-2080804:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2081668-2081784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2088482-2088610:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2095796-2095915:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2096576-2096701:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2099492-2099617:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2100642-2100776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2101687-2101812:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2102395-2102625:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2104516-2104672:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2108009-2108226:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2110193-2110369:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2111159-2111284:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2117353-2117561:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2119126-2119207:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2119415-2119520:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2121181-2121382:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2122207-2122396:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2123957-2124088:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2125014-2125154:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2125935-2126021:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2126854-2127025:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2128719-2128881:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2130291-2130516:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2132757-2133060:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2134040-2134258:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2135341-2135475:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2137301-2137409:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2140948-2141092:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2144397-2144510:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2145929-2146058:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2149889-2149959:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2153542-2153629:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2154984-2155125:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2159489-2159554:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2161624-2162276:1:exon

position:2161624:1
position: 2161624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

lrp4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: lrp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor-related protein 4 isoform X1
translation: MQPVALLLAFLLTAGPHRQGVTGSGGSECSCGRNHFTCAVSAFGECTCIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLEFHCDNGKCIRRSWVCDGDNDCGDDSDEQDCPPRECEEDEFHCQNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCNDGSCIAEHWYCDGDTDCKDGSDEDGCPAEVAATNCSMEEFQCAYGRCILDVYHCDGDDDCGDWSDESDCASHHPCRSGEFLCNSGLCINAGWKCDGDFDCDDQSDERNCTASQCTMEQFRCKSGRCIRLAWRCDGEDDCTDNSDEEDCEKTEISHCSPDQFTCGNGRCIGQRKVCNGAHDCEDATDESPHQSCRERSTEESCNISNGGCEQKCQLDRDLVQCTCHTGYRLLDNGKSCQDVDECAEDGYCSQGCTNRDGSFHCWCVQGYELRPDKRGCKALGPEPVLLFANRIDIRQVLPRRSEYTLLLNNLENAIALDFHHSKELVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHNKLFWTDSGTSRIEVSNLDGTQRKVLLWENLEKPRAIALHPMEGTIYWTDWGNTPRIEYAAMDGSNRKIIADTRLFWPNGLTIDYAGQKMYWVDAKHHVIERADLDGHNRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAAGKNRCGADNGGCSHLCLPSSTNYTCACPTGFKKIDASRCAGSLDKFLLFARRTDIRRISFDTEDKSDDVIPVADVRSAVALDWDSTGEYIYWTDVTTDSINRAKWDGTQQEAVVDTSLESPAGLAVDWVTNKLYWTDAGTDRIEVSNLDGSMRTVLIWDNLDRPRDIVVDPIAGFMYWTDWGASPKIERAGLDSSVRTVIISANLTWPNGLAVDYGTERLYWADAGMKTIEYANLNGTARRVLIGSQLPHPFGLTIHNDKIYWTDWQSKNIQSADKYTGLGRVVLRENLENLMDIHMFHRQRMSVATLCNINNGGCSHLCLLAPLPRGHSCACPTGINLLADGKTCAPGMSSFLIFARRTDVRMVSLDIPYYADVVLAVNDSMKNTIAIGVDPKEGKVYWSDSTLNTISRASLNGSQQEDIVNTGLMTTDGLAVDANGRKIYWTDTGTNRIEVANLDGTMRKVLIWENLDSPRAIALHHEKGYMYWTDWGEHAKLERAAMDGSDRTILINNNLGWPNGLVIDKVSSRLLWADAHTERIEAADLNGTSRKTLVTPVQHPYGLTLLGHHIYWTDWQTRSIQRADKNTGGDMITVRGNLPGLMDIQAIDRGQPLGFNKCGVRNGGCSHLCLPRPNGIRCACPTGIQMKTDGRTCDNAPETYLLFSSRGSIRRISLDTRDYTDVHVPVPELHNVISLDYDSVEMKVYYTDVFLDVIRSANLNGSGMKTVISQGLKTTDGLAIDWVARNLYWTDTGRNTIEVSWLDGSCRKVLINNSLDEPRAIAVFPRKGYLFWTDWGNLAKIERAQLDGTDRKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESCDLNGNLRQVLIGQVTHPFALTQHDRWIYWTDWQTKSVQCVDKYTGRNKETILANVEGLMDIIVVSPHRQTGTNLCGVDNGGCTHLCFARAEDFVCGCPDEPDGRPCSVVPGYVAPFSESASSGDRADGAGPRKAADSSPVKPTHSVEYTSENCSQKDANQGLCDQDESQVLPATTGEGLHISYIVGAVLTILAILIIIAAVIIYRHKKSKFDDPAVSNLTYSNPSYRTSTQEVKIETVQKPALYNQLRYKKETATDSSYTKGKIKIVEGICLLSNDSMYWDDLKQIKSTTRGGILRDHVCMKAETLSVQGSTDSLGDTETEQLLQDEPLSECSSINTSTQERSGIPLPDTGWQHNRKPSIESEV
SIO_010081: lrp4
subclass of: SO_0000673
so part of: lrp4
location: join(1960096..1960153,2045122..2045274,2065010..2065126,2080691..2080804,2081668..2081784,2088482..2088610,2095796..2095915,2096576..2096701,2099492..2099617,2100642..2100776,2101687..2101812,2102395..2102625,2104516..2104672,2108009..2108226,2110193..2110369,2111159..2111284,2117353..2117561,2119126..2119207,2119415..2119520,2121181..2121382,2122207..2122396,2123957..2124088,2125014..2125154,2125935..2126021,2126854..2127025,2128719..2128881,2130291..2130516,2132757..2133060,2134040..2134258,2135341..2135475,2137301..2137409,2140948..2141092,2144397..2144510,2145929..2146058,2149889..2149959,2153542..2153629,2154984..2155125,2162295..2162633)
location: region:1960096-2162633:1
so has part: feature:1960096-1960153:1:exon
so has part: feature:2045122-2045274:1:exon
so has part: feature:2065010-2065126:1:exon
so has part: feature:2080691-2080804:1:exon
so has part: feature:2081668-2081784:1:exon
so has part: feature:2088482-2088610:1:exon
so has part: feature:2095796-2095915:1:exon
so has part: feature:2096576-2096701:1:exon
so has part: feature:2099492-2099617:1:exon
so has part: feature:2100642-2100776:1:exon
so has part: feature:2101687-2101812:1:exon
so has part: feature:2102395-2102625:1:exon
so has part: feature:2104516-2104672:1:exon
so has part: feature:2108009-2108226:1:exon
so has part: feature:2110193-2110369:1:exon
so has part: feature:2111159-2111284:1:exon
so has part: feature:2117353-2117561:1:exon
so has part: feature:2119126-2119207:1:exon
so has part: feature:2119415-2119520:1:exon
so has part: feature:2121181-2121382:1:exon
so has part: feature:2122207-2122396:1:exon
so has part: feature:2123957-2124088:1:exon
so has part: feature:2125014-2125154:1:exon
so has part: feature:2125935-2126021:1:exon
so has part: feature:2126854-2127025:1:exon
so has part: feature:2128719-2128881:1:exon
so has part: feature:2130291-2130516:1:exon
so has part: feature:2132757-2133060:1:exon
so has part: feature:2134040-2134258:1:exon
so has part: feature:2135341-2135475:1:exon
so has part: feature:2137301-2137409:1:exon
so has part: feature:2140948-2141092:1:exon
so has part: feature:2144397-2144510:1:exon
so has part: feature:2145929-2146058:1:exon
so has part: feature:2149889-2149959:1:exon
so has part: feature:2153542-2153629:1:exon
so has part: feature:2154984-2155125:1:exon
so has part: feature:2162295-2162633:1:exon

XP_032894519.1
type: Protein
SIO_000068: ncbiprotein

position:1960096:1
position: 1960096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2162633:1
position: 2162633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1960096-1960153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2045122-2045274:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2065010-2065126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2080691-2080804:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2081668-2081784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2088482-2088610:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2095796-2095915:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2096576-2096701:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2099492-2099617:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2100642-2100776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2101687-2101812:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2102395-2102625:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2104516-2104672:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2108009-2108226:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2110193-2110369:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2111159-2111284:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2117353-2117561:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2119126-2119207:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2119415-2119520:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2121181-2121382:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2122207-2122396:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2123957-2124088:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2125014-2125154:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2125935-2126021:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2126854-2127025:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2128719-2128881:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2130291-2130516:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2132757-2133060:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2134040-2134258:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2135341-2135475:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2137301-2137409:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2140948-2141092:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2144397-2144510:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2145929-2146058:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2149889-2149959:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2153542-2153629:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2154984-2155125:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2162295-2162633:1:exon

lrp4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: lrp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor-related protein 4 isoform X2
translation: MQPVALLLAFLLTAGPHRQGVTGSGGSECSCGRNHFTCAVSAFGECTCIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLEFHCDNGKCIRRSWVCDGDNDCGDDSDEQDCPPRECEEDEFHCQNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCNDGSCIAEHWYCDGDTDCKDGSDEDGCPAEVAATNCSMEEFQCAYGRCILDVYHCDGDDDCGDWSDESDCASHHPCRSGEFLCNSGLCINAGWKCDGDFDCDDQSDERNCTASQCTMEQFRCKSGRCIRLAWRCDGEDDCTDNSDEEDCEKTEISHCSPDQFTCGNGRCIGQRKVCNGAHDCEDATDESPHQSCRERSTEESCNISNGGCEQKCQLDRDLVQCTCHTGYRLLDNGKSCQDVDECAEDGYCSQGCTNRDGSFHCWCVQGYELRPDKRGCKALGPEPVLLFANRIDIRQVLPRRSEYTLLLNNLENAIALDFHHSKELVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHNKLFWTDSGTSRIEVSNLDGTQRKVLLWENLEKPRAIALHPMEGTIYWTDWGNTPRIEYAAMDGSNRKIIADTRLFWPNGLTIDYAGQKMYWVDAKHHVIERADLDGHNRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGADNGGCSHLCLPSSTNYTCACPTGFKKIDASRCAGSLDKFLLFARRTDIRRISFDTEDKSDDVIPVADVRSAVALDWDSTGEYIYWTDVTTDSINRAKWDGTQQEAVVDTSLESPAGLAVDWVTNKLYWTDAGTDRIEVSNLDGSMRTVLIWDNLDRPRDIVVDPIAGFMYWTDWGASPKIERAGLDSSVRTVIISANLTWPNGLAVDYGTERLYWADAGMKTIEYANLNGTARRVLIGSQLPHPFGLTIHNDKIYWTDWQSKNIQSADKYTGLGRVVLRENLENLMDIHMFHRQRMSVATLCNINNGGCSHLCLLAPLPRGHSCACPTGINLLADGKTCAPGMSSFLIFARRTDVRMVSLDIPYYADVVLAVNDSMKNTIAIGVDPKEGKVYWSDSTLNTISRASLNGSQQEDIVNTGLMTTDGLAVDANGRKIYWTDTGTNRIEVANLDGTMRKVLIWENLDSPRAIALHHEKGYMYWTDWGEHAKLERAAMDGSDRTILINNNLGWPNGLVIDKVSSRLLWADAHTERIEAADLNGTSRKTLVTPVQHPYGLTLLGHHIYWTDWQTRSIQRADKNTGGDMITVRGNLPGLMDIQAIDRGQPLGFNKCGVRNGGCSHLCLPRPNGIRCACPTGIQMKTDGRTCDNAPETYLLFSSRGSIRRISLDTRDYTDVHVPVPELHNVISLDYDSVEMKVYYTDVFLDVIRSANLNGSGMKTVISQGLKTTDGLAIDWVARNLYWTDTGRNTIEVSWLDGSCRKVLINNSLDEPRAIAVFPRKGYLFWTDWGNLAKIERAQLDGTDRKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESCDLNGNLRQVLIGQVTHPFALTQHDRWIYWTDWQTKSVQCVDKYTGRNKETILANVEGLMDIIVVSPHRQTGTNLCGVDNGGCTHLCFARAEDFVCGCPDEPDGRPCSVVPGYVAPFSESASSGDRADGAGPRKAADSSPVKPTHSVEYTSENCSQKDANQGLCDQDESQVLPATTGEGLHISYIVGAVLTILAILIIIAAVIIYRHKKSKFDDPAVSNLTYSNPSYRTSTQEVKIETVQKPALYNQLRYKKETATDSSYTKGKIKIVEGICLLSNDSMYWDDLKQIKSTTRGGILRDHVCMKAETLSVQGSTDSLGDTETEQLLQDEPLSECSSINTSTQERSGIPLPDTGWQHNRKPSIESEV
SIO_010081: lrp4
subclass of: SO_0000673
so part of: lrp4
location: join(1960096..1960153,2045122..2045274,2065010..2065126,2080691..2080804,2081668..2081784,2088482..2088610,2095796..2095915,2096576..2096701,2099492..2099617,2100642..2100776,2101687..2101812,2102395..2102625,2104516..2104672,2108009..2108226,2110193..2110369,2111162..2111284,2117353..2117561,2119126..2119207,2119415..2119520,2121181..2121382,2122207..2122396,2123957..2124088,2125014..2125154,2125935..2126021,2126854..2127025,2128719..2128881,2130291..2130516,2132757..2133060,2134040..2134258,2135341..2135475,2137301..2137409,2140948..2141092,2144397..2144510,2145929..2146058,2149889..2149959,2153542..2153629,2154984..2155125,2162295..2162633)
location: region:1960096-2162633:1
so has part: feature:1960096-1960153:1:exon
so has part: feature:2045122-2045274:1:exon
so has part: feature:2065010-2065126:1:exon
so has part: feature:2080691-2080804:1:exon
so has part: feature:2081668-2081784:1:exon
so has part: feature:2088482-2088610:1:exon
so has part: feature:2095796-2095915:1:exon
so has part: feature:2096576-2096701:1:exon
so has part: feature:2099492-2099617:1:exon
so has part: feature:2100642-2100776:1:exon
so has part: feature:2101687-2101812:1:exon
so has part: feature:2102395-2102625:1:exon
so has part: feature:2104516-2104672:1:exon
so has part: feature:2108009-2108226:1:exon
so has part: feature:2110193-2110369:1:exon
so has part: feature:2111162-2111284:1:exon
so has part: feature:2117353-2117561:1:exon
so has part: feature:2119126-2119207:1:exon
so has part: feature:2119415-2119520:1:exon
so has part: feature:2121181-2121382:1:exon
so has part: feature:2122207-2122396:1:exon
so has part: feature:2123957-2124088:1:exon
so has part: feature:2125014-2125154:1:exon
so has part: feature:2125935-2126021:1:exon
so has part: feature:2126854-2127025:1:exon
so has part: feature:2128719-2128881:1:exon
so has part: feature:2130291-2130516:1:exon
so has part: feature:2132757-2133060:1:exon
so has part: feature:2134040-2134258:1:exon
so has part: feature:2135341-2135475:1:exon
so has part: feature:2137301-2137409:1:exon
so has part: feature:2140948-2141092:1:exon
so has part: feature:2144397-2144510:1:exon
so has part: feature:2145929-2146058:1:exon
so has part: feature:2149889-2149959:1:exon
so has part: feature:2153542-2153629:1:exon
so has part: feature:2154984-2155125:1:exon
so has part: feature:2162295-2162633:1:exon

XP_032894520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1960096-1960153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2045122-2045274:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2065010-2065126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2080691-2080804:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2081668-2081784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2088482-2088610:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2095796-2095915:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2096576-2096701:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2099492-2099617:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2100642-2100776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2101687-2101812:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2102395-2102625:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2104516-2104672:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2108009-2108226:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2110193-2110369:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2111162-2111284:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2117353-2117561:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2119126-2119207:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2119415-2119520:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2121181-2121382:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2122207-2122396:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2123957-2124088:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2125014-2125154:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2125935-2126021:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2126854-2127025:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2128719-2128881:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2130291-2130516:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2132757-2133060:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2134040-2134258:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2135341-2135475:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2137301-2137409:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2140948-2141092:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2144397-2144510:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2145929-2146058:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2149889-2149959:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2153542-2153629:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2154984-2155125:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2162295-2162633:1:exon

lrp4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: lrp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor-related protein 4 isoform X3
translation: MQPVALLLAFLLTAGPHRQGVTGSGGSECSCGRNHFTCAVSAFGECTCIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLEFHCDNGKCIRRSWVCDGDNDCGDDSDEQDCPPRECEEDEFHCQNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCNDGSCIAEHWYCDGDTDCKDGSDEDGCPAEVAATNCSMEEFQCAYGRCILDVYHCDGDDDCGDWSDESDCASHHPCRSGEFLCNSGLCINAGWKCDGDFDCDDQSDERNCTASQCTMEQFRCKSGRCIRLAWRCDGEDDCTDNSDEEDCEKTEISHCSPDQFTCGNGRCIGQRKVCNGAHDCEDATDESPHQSCRERSTEESCNISNGGCEQKCQLDRDLVQCTCHTGYRLLDNGKSCQDVDECAEDGYCSQGCTNRDGSFHCWCVQGYELRPDKRGCKALGPEPVLLFANRIDIRQVLPRRSEYTLLLNNLENAIALDFHHSKELVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHNKLFWTDSGTSRIEVSNLDGTQRKVLLWENLEKPRAIALHPMEGTIYWTDWGNTPRIEYAAMDGSNRKIIADTRLFWPNGLTIDYAGQKMYWVDAKHHVIERADLDGHNRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAAGKNRCGADNGGCSHLCLPSSTNYTCACPTGFKKIDASRCAGSLDKFLLFARRTDIRRISFDTEDKSDDVIPVADVRSAVALDWDSTGEYIYWTDVTTDSINRAKWDGTQQEAVVDTSLESPAGLAVDWVTNKLYWTDAGTDRIEVSNLDGSMRTVLIWDNLDRPRDIVVDPIAGFMYWTDWGASPKIERAGLDSSVRTVIISANLTWPNGLAVDYGTERLYWADAGMKTIEYANLNGTARRVLIGSQLPHPFGLTIHNDKIYWTDWQSKNIQSADKYTGLGRVVLRENLENLMDIHMFHRQRMSVATLCNINNGGCSHLCLLAPLPRGHSCACPTGINLLADGKTCAPGMSSFLIFARRTDVRMVSLDIPYYADVVLAVNDSMKNTIAIGVDPKEGKVYWSDSTLNTISRASLNGSQQEDIVNTGLMTTDGLAVDANGRKIYWTDTGTNRIEVANLDGTMRKVLIWENLDSPRAIALHHEKGYMYWTDWGEHAKLERAAMDGSDRTILINNNLGWPNGLVIDKVSSRLLWADAHTERIEAADLNGTSRKTLVTPVQHPYGLTLLGHHIYWTDWQTRSIQRADKNTGGDMITVRGNLPGLMDIQAIDRGQPLGFNKCGVRNGGCSHLCLPRPNGIRCACPTGIQMKTDGRTCDNAPETYLLFSSRGSIRRISLDTRDYTDVHVPVPELHNVISLDYDSVEMKVYYTDVFLDVIRSANLNGSGMKTVISQGLKTTDGLAIDWVARNLYWTDTGRNTIEVSWLDGSCRKVLINNSLDEPRAIAVFPRKGYLFWTDWGNLAKIERAQLDGTDRKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESCDLNGNLRQVLIGQVTHPFALTQHDRWIYWTDWQTKSVQCVDKYTGRNKETILANVEGLMDIIVVSPHRQTGTNLCGVDNGGCTHLCFARAEDFVCGCPDEPDGRPCSVVPGYVAPFSESASSGDRADGAGPRKAADSSPVKPTHSVEYTSENCSQKDANQGLCDQDESQVLPATTGEGLHISYIVGAVLTILAILIIIAAVIIYRHKKSKFDDPAVSNLTYSNPSYRTSTQEVKIETVQKPALYNQLRYKKELSGPSDSLSPFIF
SIO_010081: lrp4
subclass of: SO_0000673
so part of: lrp4
location: join(1960096..1960153,2045122..2045274,2065010..2065126,2080691..2080804,2081668..2081784,2088482..2088610,2095796..2095915,2096576..2096701,2099492..2099617,2100642..2100776,2101687..2101812,2102395..2102625,2104516..2104672,2108009..2108226,2110193..2110369,2111159..2111284,2117353..2117561,2119126..2119207,2119415..2119520,2121181..2121382,2122207..2122396,2123957..2124088,2125014..2125154,2125935..2126021,2126854..2127025,2128719..2128881,2130291..2130516,2132757..2133060,2134040..2134258,2135341..2135475,2137301..2137409,2140948..2141092,2144397..2144510,2145929..2146058,2149889..2149959,2153542..2153629,2154984..2155125,2159489..2159530)
location: region:1960096-2159530:1
so has part: feature:1960096-1960153:1:exon
so has part: feature:2045122-2045274:1:exon
so has part: feature:2065010-2065126:1:exon
so has part: feature:2080691-2080804:1:exon
so has part: feature:2081668-2081784:1:exon
so has part: feature:2088482-2088610:1:exon
so has part: feature:2095796-2095915:1:exon
so has part: feature:2096576-2096701:1:exon
so has part: feature:2099492-2099617:1:exon
so has part: feature:2100642-2100776:1:exon
so has part: feature:2101687-2101812:1:exon
so has part: feature:2102395-2102625:1:exon
so has part: feature:2104516-2104672:1:exon
so has part: feature:2108009-2108226:1:exon
so has part: feature:2110193-2110369:1:exon
so has part: feature:2111159-2111284:1:exon
so has part: feature:2117353-2117561:1:exon
so has part: feature:2119126-2119207:1:exon
so has part: feature:2119415-2119520:1:exon
so has part: feature:2121181-2121382:1:exon
so has part: feature:2122207-2122396:1:exon
so has part: feature:2123957-2124088:1:exon
so has part: feature:2125014-2125154:1:exon
so has part: feature:2125935-2126021:1:exon
so has part: feature:2126854-2127025:1:exon
so has part: feature:2128719-2128881:1:exon
so has part: feature:2130291-2130516:1:exon
so has part: feature:2132757-2133060:1:exon
so has part: feature:2134040-2134258:1:exon
so has part: feature:2135341-2135475:1:exon
so has part: feature:2137301-2137409:1:exon
so has part: feature:2140948-2141092:1:exon
so has part: feature:2144397-2144510:1:exon
so has part: feature:2145929-2146058:1:exon
so has part: feature:2149889-2149959:1:exon
so has part: feature:2153542-2153629:1:exon
so has part: feature:2154984-2155125:1:exon
so has part: feature:2159489-2159530:1:exon

XP_032894521.1
type: Protein
SIO_000068: ncbiprotein

position:2159530:1
position: 2159530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1960096-1960153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2045122-2045274:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2065010-2065126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2080691-2080804:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2081668-2081784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2088482-2088610:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2095796-2095915:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2096576-2096701:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2099492-2099617:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2100642-2100776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2101687-2101812:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2102395-2102625:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2104516-2104672:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2108009-2108226:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2110193-2110369:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2111159-2111284:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2117353-2117561:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2119126-2119207:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2119415-2119520:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2121181-2121382:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2122207-2122396:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2123957-2124088:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2125014-2125154:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2125935-2126021:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2126854-2127025:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2128719-2128881:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2130291-2130516:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2132757-2133060:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2134040-2134258:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2135341-2135475:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2137301-2137409:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2140948-2141092:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2144397-2144510:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2145929-2146058:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2149889-2149959:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2153542-2153629:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2154984-2155125:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2159489-2159530:1:exon

lrp4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: lrp4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor-related protein 4 isoform X3
translation: MQPVALLLAFLLTAGPHRQGVTGSGGSECSCGRNHFTCAVSAFGECTCIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLEFHCDNGKCIRRSWVCDGDNDCGDDSDEQDCPPRECEEDEFHCQNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCNDGSCIAEHWYCDGDTDCKDGSDEDGCPAEVAATNCSMEEFQCAYGRCILDVYHCDGDDDCGDWSDESDCASHHPCRSGEFLCNSGLCINAGWKCDGDFDCDDQSDERNCTASQCTMEQFRCKSGRCIRLAWRCDGEDDCTDNSDEEDCEKTEISHCSPDQFTCGNGRCIGQRKVCNGAHDCEDATDESPHQSCRERSTEESCNISNGGCEQKCQLDRDLVQCTCHTGYRLLDNGKSCQDVDECAEDGYCSQGCTNRDGSFHCWCVQGYELRPDKRGCKALGPEPVLLFANRIDIRQVLPRRSEYTLLLNNLENAIALDFHHSKELVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHNKLFWTDSGTSRIEVSNLDGTQRKVLLWENLEKPRAIALHPMEGTIYWTDWGNTPRIEYAAMDGSNRKIIADTRLFWPNGLTIDYAGQKMYWVDAKHHVIERADLDGHNRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAAGKNRCGADNGGCSHLCLPSSTNYTCACPTGFKKIDASRCAGSLDKFLLFARRTDIRRISFDTEDKSDDVIPVADVRSAVALDWDSTGEYIYWTDVTTDSINRAKWDGTQQEAVVDTSLESPAGLAVDWVTNKLYWTDAGTDRIEVSNLDGSMRTVLIWDNLDRPRDIVVDPIAGFMYWTDWGASPKIERAGLDSSVRTVIISANLTWPNGLAVDYGTERLYWADAGMKTIEYANLNGTARRVLIGSQLPHPFGLTIHNDKIYWTDWQSKNIQSADKYTGLGRVVLRENLENLMDIHMFHRQRMSVATLCNINNGGCSHLCLLAPLPRGHSCACPTGINLLADGKTCAPGMSSFLIFARRTDVRMVSLDIPYYADVVLAVNDSMKNTIAIGVDPKEGKVYWSDSTLNTISRASLNGSQQEDIVNTGLMTTDGLAVDANGRKIYWTDTGTNRIEVANLDGTMRKVLIWENLDSPRAIALHHEKGYMYWTDWGEHAKLERAAMDGSDRTILINNNLGWPNGLVIDKVSSRLLWADAHTERIEAADLNGTSRKTLVTPVQHPYGLTLLGHHIYWTDWQTRSIQRADKNTGGDMITVRGNLPGLMDIQAIDRGQPLGFNKCGVRNGGCSHLCLPRPNGIRCACPTGIQMKTDGRTCDNAPETYLLFSSRGSIRRISLDTRDYTDVHVPVPELHNVISLDYDSVEMKVYYTDVFLDVIRSANLNGSGMKTVISQGLKTTDGLAIDWVARNLYWTDTGRNTIEVSWLDGSCRKVLINNSLDEPRAIAVFPRKGYLFWTDWGNLAKIERAQLDGTDRKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESCDLNGNLRQVLIGQVTHPFALTQHDRWIYWTDWQTKSVQCVDKYTGRNKETILANVEGLMDIIVVSPHRQTGTNLCGVDNGGCTHLCFARAEDFVCGCPDEPDGRPCSVVPGYVAPFSESASSGDRADGAGPRKAADSSPVKPTHSVEYTSENCSQKDANQGLCDQDESQVLPATTGEGLHISYIVGAVLTILAILIIIAAVIIYRHKKSKFDDPAVSNLTYSNPSYRTSTQEVKIETVQKPALYNQLRYKKELSGPSDSLSPFIF
SIO_010081: lrp4
subclass of: SO_0000673
so part of: lrp4
location: join(1960096..1960153,2045122..2045274,2065010..2065126,2080691..2080804,2081668..2081784,2088482..2088610,2095796..2095915,2096576..2096701,2099492..2099617,2100642..2100776,2101687..2101812,2102395..2102625,2104516..2104672,2108009..2108226,2110193..2110369,2111159..2111284,2117353..2117561,2119126..2119207,2119415..2119520,2121181..2121382,2122207..2122396,2123957..2124088,2125014..2125154,2125935..2126021,2126854..2127025,2128719..2128881,2130291..2130516,2132757..2133060,2134040..2134258,2135341..2135475,2137301..2137409,2140948..2141092,2144397..2144510,2145929..2146058,2149889..2149959,2153542..2153629,2154984..2155125,2159489..2159530)
location: region:1960096-2159530:1
so has part: feature:1960096-1960153:1:exon
so has part: feature:2045122-2045274:1:exon
so has part: feature:2065010-2065126:1:exon
so has part: feature:2080691-2080804:1:exon
so has part: feature:2081668-2081784:1:exon
so has part: feature:2088482-2088610:1:exon
so has part: feature:2095796-2095915:1:exon
so has part: feature:2096576-2096701:1:exon
so has part: feature:2099492-2099617:1:exon
so has part: feature:2100642-2100776:1:exon
so has part: feature:2101687-2101812:1:exon
so has part: feature:2102395-2102625:1:exon
so has part: feature:2104516-2104672:1:exon
so has part: feature:2108009-2108226:1:exon
so has part: feature:2110193-2110369:1:exon
so has part: feature:2111159-2111284:1:exon
so has part: feature:2117353-2117561:1:exon
so has part: feature:2119126-2119207:1:exon
so has part: feature:2119415-2119520:1:exon
so has part: feature:2121181-2121382:1:exon
so has part: feature:2122207-2122396:1:exon
so has part: feature:2123957-2124088:1:exon
so has part: feature:2125014-2125154:1:exon
so has part: feature:2125935-2126021:1:exon
so has part: feature:2126854-2127025:1:exon
so has part: feature:2128719-2128881:1:exon
so has part: feature:2130291-2130516:1:exon
so has part: feature:2132757-2133060:1:exon
so has part: feature:2134040-2134258:1:exon
so has part: feature:2135341-2135475:1:exon
so has part: feature:2137301-2137409:1:exon
so has part: feature:2140948-2141092:1:exon
so has part: feature:2144397-2144510:1:exon
so has part: feature:2145929-2146058:1:exon
so has part: feature:2149889-2149959:1:exon
so has part: feature:2153542-2153629:1:exon
so has part: feature:2154984-2155125:1:exon
so has part: feature:2159489-2159530:1:exon

XP_032894522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1960096-1960153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2045122-2045274:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2065010-2065126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2080691-2080804:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2081668-2081784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2088482-2088610:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2095796-2095915:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2096576-2096701:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2099492-2099617:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2100642-2100776:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2101687-2101812:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2102395-2102625:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2104516-2104672:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2108009-2108226:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2110193-2110369:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2111159-2111284:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2117353-2117561:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2119126-2119207:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2119415-2119520:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2121181-2121382:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2122207-2122396:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2123957-2124088:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2125014-2125154:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2125935-2126021:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2126854-2127025:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2128719-2128881:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2130291-2130516:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2132757-2133060:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2134040-2134258:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2135341-2135475:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2137301-2137409:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2140948-2141092:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2144397-2144510:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2145929-2146058:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2149889-2149959:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2153542-2153629:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2154984-2155125:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2159489-2159530:1:exon

LOC116984497
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984497
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2068165..2072548
location: region:2068165-2072548:1
so has part: feature:2068165-2072548:1:exon
subclass of: SO_0000011

116984497
type: Gene
SIO_000068: ncbigene

position:2068165:1
position: 2068165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2072548:1
position: 2072548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2068165-2072548:1:exon

LOC116984497
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116984497
product: uncharacterized LOC116984497
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004415046.1
SIO_010081: LOC116984497
subclass of: SO_0000673
so part of: LOC116984497
location: join(2068165..2068174,2069850..2069851,2072345..2072548)
location: region:2068165-2072548:1
so has part: feature:2068165-2068174:1:exon
so has part: feature:2069850-2069851:1:exon
so has part: feature:2072345-2072548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2068165-2068174:1:exon

position:2068174:1
position: 2068174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2069850-2069851:1:exon

position:2069850:1
position: 2069850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2069851:1
position: 2069851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2072345-2072548:1:exon

position:2072345:1
position: 2072345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116984496
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2163657..2166945
location: region:2163657-2166945:1
so has part: feature:2163657-2166945:1:exon
subclass of: SO_0000011

116984496
type: Gene
SIO_000068: ncbigene

position:2163657:1
position: 2163657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2166945:1
position: 2166945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2163657-2166945:1:exon

LOC116984496
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116984496
product: uncharacterized LOC116984496
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004415045.1
SIO_010081: LOC116984496
subclass of: SO_0000673
so part of: LOC116984496
location: join(2163657..2164110,2164313..2166945)
location: region:2163657-2166945:1
so has part: feature:2163657-2164110:1:exon
so has part: feature:2164313-2166945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2163657-2164110:1:exon

position:2164110:1
position: 2164110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2164313-2166945:1:exon

position:2164313:1
position: 2164313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ckap5
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ckap5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2178638..2242531
location: region:2178638-2242531:1
so has part: feature:2178638-2242531:1:exon
subclass of: SO_0000010

116984498
type: Gene
SIO_000068: ncbigene

position:2178638:1
position: 2178638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2242531:1
position: 2242531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2178638-2242531:1:exon

ckap5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ckap5
product: cytoskeleton associated protein 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033038634.1
SIO_010081: ckap5
subclass of: SO_0000673
so part of: ckap5
location: join(2178638..2179062,2184761..2184845,2191870..2192063,2193024..2193230,2193504..2193675,2193772..2193901,2194085..2194182,2194898..2195011,2196048..2196152,2196552..2196641,2199189..2199353,2199500..2199628,2201074..2201247,2202294..2202389,2202728..2202838,2204861..2204953,2205686..2205871,2207768..2207862,2209211..2209268,2209351..2209476,2209918..2210051,2210330..2210504,2213752..2213865,2214441..2214569,2214644..2214838,2216093..2216219,2217065..2217165,2220033..2220158,2220267..2220416,2221994..2222197,2223465..2223600,2223968..2224161,2226478..2226644,2229555..2229734,2231695..2231815,2232343..2232522,2233498..2233685,2235949..2236027,2236121..2236309,2237805..2237942,2238821..2238904,2239477..2239642,2240193..2240344,2241410..2242283)
location: region:2178638-2242283:1
so has part: feature:2178638-2179062:1:exon
so has part: feature:2184761-2184845:1:exon
so has part: feature:2191870-2192063:1:exon
so has part: feature:2193024-2193230:1:exon
so has part: feature:2193504-2193675:1:exon
so has part: feature:2193772-2193901:1:exon
so has part: feature:2194085-2194182:1:exon
so has part: feature:2194898-2195011:1:exon
so has part: feature:2196048-2196152:1:exon
so has part: feature:2196552-2196641:1:exon
so has part: feature:2199189-2199353:1:exon
so has part: feature:2199500-2199628:1:exon
so has part: feature:2201074-2201247:1:exon
so has part: feature:2202294-2202389:1:exon
so has part: feature:2202728-2202838:1:exon
so has part: feature:2204861-2204953:1:exon
so has part: feature:2205686-2205871:1:exon
so has part: feature:2207768-2207862:1:exon
so has part: feature:2209211-2209268:1:exon
so has part: feature:2209351-2209476:1:exon
so has part: feature:2209918-2210051:1:exon
so has part: feature:2210330-2210504:1:exon
so has part: feature:2213752-2213865:1:exon
so has part: feature:2214441-2214569:1:exon
so has part: feature:2214644-2214838:1:exon
so has part: feature:2216093-2216219:1:exon
so has part: feature:2217065-2217165:1:exon
so has part: feature:2220033-2220158:1:exon
so has part: feature:2220267-2220416:1:exon
so has part: feature:2221994-2222197:1:exon
so has part: feature:2223465-2223600:1:exon
so has part: feature:2223968-2224161:1:exon
so has part: feature:2226478-2226644:1:exon
so has part: feature:2229555-2229734:1:exon
so has part: feature:2231695-2231815:1:exon
so has part: feature:2232343-2232522:1:exon
so has part: feature:2233498-2233685:1:exon
so has part: feature:2235949-2236027:1:exon
so has part: feature:2236121-2236309:1:exon
so has part: feature:2237805-2237942:1:exon
so has part: feature:2238821-2238904:1:exon
so has part: feature:2239477-2239642:1:exon
so has part: feature:2240193-2240344:1:exon
so has part: feature:2241410-2242283:1:exon

position:2242283:1
position: 2242283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2178638-2179062:1:exon

position:2179062:1
position: 2179062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2184761-2184845:1:exon

position:2184761:1
position: 2184761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2184845:1
position: 2184845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2191870-2192063:1:exon

position:2191870:1
position: 2191870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2192063:1
position: 2192063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2193024-2193230:1:exon

position:2193024:1
position: 2193024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2193230:1
position: 2193230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2193504-2193675:1:exon

position:2193504:1
position: 2193504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2193675:1
position: 2193675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2193772-2193901:1:exon

position:2193772:1
position: 2193772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2193901:1
position: 2193901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2194085-2194182:1:exon

position:2194085:1
position: 2194085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2194182:1
position: 2194182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2194898-2195011:1:exon

position:2194898:1
position: 2194898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2195011:1
position: 2195011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2196048-2196152:1:exon

position:2196048:1
position: 2196048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2196152:1
position: 2196152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2196552-2196641:1:exon

position:2196552:1
position: 2196552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2196641:1
position: 2196641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2199189-2199353:1:exon

position:2199189:1
position: 2199189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2199353:1
position: 2199353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2199500-2199628:1:exon

position:2199500:1
position: 2199500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2199628:1
position: 2199628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2201074-2201247:1:exon

position:2201074:1
position: 2201074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2201247:1
position: 2201247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2202294-2202389:1:exon

position:2202294:1
position: 2202294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2202389:1
position: 2202389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2202728-2202838:1:exon

position:2202728:1
position: 2202728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2202838:1
position: 2202838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2204861-2204953:1:exon

position:2204861:1
position: 2204861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2204953:1
position: 2204953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2205686-2205871:1:exon

position:2205686:1
position: 2205686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2205871:1
position: 2205871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2207768-2207862:1:exon

position:2207768:1
position: 2207768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2207862:1
position: 2207862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2209211-2209268:1:exon

position:2209211:1
position: 2209211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2209268:1
position: 2209268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2209351-2209476:1:exon

position:2209351:1
position: 2209351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2209476:1
position: 2209476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2209918-2210051:1:exon

position:2209918:1
position: 2209918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2210051:1
position: 2210051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2210330-2210504:1:exon

position:2210330:1
position: 2210330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2210504:1
position: 2210504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2213752-2213865:1:exon

position:2213752:1
position: 2213752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2213865:1
position: 2213865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2214441-2214569:1:exon

position:2214441:1
position: 2214441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2214569:1
position: 2214569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2214644-2214838:1:exon

position:2214644:1
position: 2214644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2214838:1
position: 2214838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2216093-2216219:1:exon

position:2216093:1
position: 2216093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2216219:1
position: 2216219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2217065-2217165:1:exon

position:2217065:1
position: 2217065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2217165:1
position: 2217165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2220033-2220158:1:exon

position:2220033:1
position: 2220033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2220158:1
position: 2220158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2220267-2220416:1:exon

position:2220267:1
position: 2220267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2220416:1
position: 2220416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2221994-2222197:1:exon

position:2221994:1
position: 2221994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2222197:1
position: 2222197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2223465-2223600:1:exon

position:2223465:1
position: 2223465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2223600:1
position: 2223600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2223968-2224161:1:exon

position:2223968:1
position: 2223968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2224161:1
position: 2224161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2226478-2226644:1:exon

position:2226478:1
position: 2226478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2226644:1
position: 2226644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2229555-2229734:1:exon

position:2229555:1
position: 2229555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2229734:1
position: 2229734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2231695-2231815:1:exon

position:2231695:1
position: 2231695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2231815:1
position: 2231815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2232343-2232522:1:exon

position:2232343:1
position: 2232343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2232522:1
position: 2232522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2233498-2233685:1:exon

position:2233498:1
position: 2233498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2233685:1
position: 2233685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2235949-2236027:1:exon

position:2235949:1
position: 2235949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2236027:1
position: 2236027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2236121-2236309:1:exon

position:2236121:1
position: 2236121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2236309:1
position: 2236309
reference: sequence
type: ForwardStrandPosition
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SIO_000300: 41
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SIO_000300: 44
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position:2241410:1
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reference: sequence
type: ForwardStrandPosition
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ckap5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ckap5
product: cytoskeleton associated protein 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033038632.1
SIO_010081: ckap5
subclass of: SO_0000673
so part of: ckap5
location: join(2178647..2179062,2184761..2184845,2191870..2192063,2193024..2193230,2193504..2193675,2193772..2193901,2194085..2194182,2194898..2195011,2196048..2196152,2196552..2196641,2199189..2199353,2199500..2199628,2201074..2201247,2202294..2202389,2202728..2202838,2204861..2204953,2205686..2205871,2207768..2207862,2209211..2209268,2209351..2209476,2209918..2210051,2210330..2210504,2213752..2213865,2214441..2214569,2214644..2214838,2216093..2216219,2217065..2217165,2220033..2220158,2220267..2220416,2221994..2222197,2223465..2223600,2223968..2224161,2226478..2226644,2229221..2229244,2229555..2229734,2231695..2231815,2232343..2232522,2233498..2233685,2235949..2236027,2236121..2236309,2237805..2237942,2238821..2238904,2239477..2239642,2240193..2240344,2241410..2242531)
location: region:2178647-2242531:1
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position:2178647:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
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urn:…
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urn:…
SIO_000300: 35
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SIO_000628: feature:2240193-2240344:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2241410-2242531:1:exon

ckap5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ckap5
product: cytoskeleton associated protein 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033038633.1
SIO_010081: ckap5
subclass of: SO_0000673
so part of: ckap5
location: join(2178647..2179062,2184761..2184845,2191870..2192063,2193024..2193230,2193504..2193675,2193772..2193901,2194085..2194182,2194898..2195011,2196048..2196152,2196552..2196641,2199189..2199353,2199500..2199628,2201074..2201247,2202294..2202389,2202728..2202838,2204861..2204953,2205686..2205871,2207768..2207862,2209211..2209268,2209351..2209476,2209918..2210051,2210330..2210504,2213752..2213865,2214441..2214569,2214644..2214838,2216093..2216219,2217065..2217165,2220033..2220158,2220267..2220416,2221994..2222197,2223465..2223600,2223968..2224161,2226478..2226644,2229221..2229244,2229555..2229734,2231695..2231815,2232343..2232522,2233498..2233685,2235949..2236027,2236121..2236309,2237805..2237942,2238821..2238904,2239477..2239642,2240196..2240344,2241410..2242531)
location: region:2178647-2242531:1
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urn:…
SIO_000300: 1
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urn:…
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urn:…
SIO_000300: 44
SIO_000628: feature:2240196-2240344:1:exon

position:2240196:1
position: 2240196
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 45
SIO_000628: feature:2241410-2242531:1:exon

ckap5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ckap5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 5 isoform X1
translation: MGDESEWIKLPIDQKCEHKVWKARLNGYEEAAKLFQKISDEKNPEWSKYLGLIKKFVTDSNAVAQLKGLEAALVYITNAHVAGKTAGEVVSGVVNKVFNQPKVRAKEMGIEICLMYMEIEKTEPVQEELVKGLDNKNPKIIVACIETLRKALGEFGSKIVQLKPIVKVLPKLFESREKAVRDEAKLLAVEVYKWIRDALRPPLQNINSVQLKELEEEWVKLPTSAPKQTRFLRSQQDLKAKFEQQQATGDEEGDDEEDDAPVVDAYELLEPVEILLKLPKDFYDKIEAKKWQERKEALEALELLVKNPRLESGDYSDVVRALKRVIGKDSNVLLVALGAKCLTGLAAGLRKKFQTYAGHVMPTLLEKFKEKKPQVVQALQEAIDTVFLTTTLQNLSEDVLAVMDNKNPSIKQQAALFLARSFCHCTPSTLPKSLLKPLCAALLKQINDSALEVRDAAFEALGTALKVVGERIMNPFLADVDKLKLEKIKEASDKVELAHGKKSNASKEANVGATGKGCSASSSGDKADASATRTGVLSKKTSANKSAGASKKMKAVVPPSGPSGKGKKAAEVKEDLSFDVCEEQAAAVLPATCLQQLDSSNWKERLASMEEFQKGVEVTEKKLLPCQALVRMLAKKPGWKETNFQVMQMKLHIVALIAQKGNFSRISAEVVMDGLVDKIGDIKCGVKAKEALTAIAAACSLPWTAEQVVAMAFAQKNPKNQSEILNWLAAAIKEFGFAGFNVKAFISHVKTALAATNPAVRISAVALLGVMYLYMGAPLRMFFEDEKPALLSQIDAEFEKMQGQAPPAAIRRVAKHDADEEEATEEQDDEENGNVQDLLPRTDIGDKITSDLVTKLGDKNWKIRKEGLDELCAILNEAKLIQPNIGDLPGALKGRLNDSNKILVQQTLAILQQMATAMGPNIRQHVKHLGIPIITVLGDSKNNVRAAALTTLNLWVEKTGMKEWLDGDDLSEELKKENPFLRQELLGWLAEKLPTLRTVPADLGHCLPHLYSCLEDRNGDVRKKAQDALPTFMMHLGYEKMNKVASKLKPASKDQVLTALEKAQAVVPAKTVAPTKTSSKSNAGAARPVGAASARVNCASANDETDSFKSDAKKGKSTGVASKLKSAPNKKVPSKPNVKDDDDRSGPLFIIIPNAKEQRVKDERALKVLKWNFTTPRDEYSEQLKTQMSSCVAKWVQDEMFHSDFHHHIKALTVLLEHLENEFEGTVACLDLILRWLTLRFFDTNTTVLMKVLEYLKLLFTLLSKEDYHLTENEGNSFIPYLINKVGESKDVIRKDVRSILNTLCKLYPASKMFNLIMDGLKSKNSKQRAECLEELGSLIEVHDLNVCQPTPAKALKEIASQIGDRDTSVRNAALNTVVTVYNICGDQVFKLIGNLSEKEMSMLEERIKRSAKKPSTVSVKQEEKTQRPPGTNQNAGMPRKGCEDVPSKLKIMYRTYRIQARCNNAQSASESTHTIPREFQLDLDKIENDNHAGRCELPDLVQHQLDELYEPVCIPEPKNRSVSPHYDEMHGTTDSTINFVVSQVASSEINTSIQALAQIDEVLRQESKVDAMSGHIDQFLIATFMQLRLIYNTHMADEKLNKSEILKLYSCIIGNMITLFQIEPLAKEASMGVLKDLMHGLILLMLDSRLEDLDEGPQVIRSINLLMVKVLEKSDPTNILSSLIVLLQDSLLATPNNSPKFSELILKCLWRVIRLLPNNINDVNVDRILLDLHNFMRVFPKERLKQMKCDLPMRTQKTLLHALYKLLGPKIMDHLTLIENKNESELEAHLRRVIKHSVGLSGGKTDSETEKGGSTIEDKESKAKISETLAEIFKKIGSKENTREGLAELYEYRKKYSDADIEPFLRKSSQFFQNYIERGLRLVENEREGKGRISSSSSSAGFSSPPDEMPYVASSMSIPPSGNGEELGPAVYLERLKILRQRCGLENNSKHEERQPPTSLLSKPTVPTVASSSELLHNKLTHLRDSRECTQEQESHPPT…
SIO_010081: ckap5
subclass of: SO_0000673
so part of: ckap5
location: join(2184789..2184845,2191870..2192063,2193024..2193230,2193504..2193675,2193772..2193901,2194085..2194182,2194898..2195011,2196048..2196152,2196552..2196641,2199189..2199353,2199500..2199628,2201074..2201247,2202294..2202389,2202728..2202838,2204861..2204953,2205686..2205871,2207768..2207862,2209211..2209268,2209351..2209476,2209918..2210051,2210330..2210504,2213752..2213865,2214441..2214569,2214644..2214838,2216093..2216219,2217065..2217165,2220033..2220158,2220267..2220416,2221994..2222197,2223465..2223600,2223968..2224161,2226478..2226644,2229221..2229244,2229555..2229734,2231695..2231815,2232343..2232522,2233498..2233685,2235949..2236027,2236121..2236309,2237805..2237942,2238821..2238904,2239477..2239642,2240193..2240344,2241410..2241640)
location: region:2184789-2241640:1
so has part: feature:2184789-2184845:1:exon
so has part: feature:2191870-2192063:1:exon
so has part: feature:2193024-2193230:1:exon
so has part: feature:2193504-2193675:1:exon
so has part: feature:2193772-2193901:1:exon
so has part: feature:2194085-2194182:1:exon
so has part: feature:2194898-2195011:1:exon
so has part: feature:2196048-2196152:1:exon
so has part: feature:2196552-2196641:1:exon
so has part: feature:2199189-2199353:1:exon
so has part: feature:2199500-2199628:1:exon
so has part: feature:2201074-2201247:1:exon
so has part: feature:2202294-2202389:1:exon
so has part: feature:2202728-2202838:1:exon
so has part: feature:2204861-2204953:1:exon
so has part: feature:2205686-2205871:1:exon
so has part: feature:2207768-2207862:1:exon
so has part: feature:2209211-2209268:1:exon
so has part: feature:2209351-2209476:1:exon
so has part: feature:2209918-2210051:1:exon
so has part: feature:2210330-2210504:1:exon
so has part: feature:2213752-2213865:1:exon
so has part: feature:2214441-2214569:1:exon
so has part: feature:2214644-2214838:1:exon
so has part: feature:2216093-2216219:1:exon
so has part: feature:2217065-2217165:1:exon
so has part: feature:2220033-2220158:1:exon
so has part: feature:2220267-2220416:1:exon
so has part: feature:2221994-2222197:1:exon
so has part: feature:2223465-2223600:1:exon
so has part: feature:2223968-2224161:1:exon
so has part: feature:2226478-2226644:1:exon
so has part: feature:2229221-2229244:1:exon
so has part: feature:2229555-2229734:1:exon
so has part: feature:2231695-2231815:1:exon
so has part: feature:2232343-2232522:1:exon
so has part: feature:2233498-2233685:1:exon
so has part: feature:2235949-2236027:1:exon
so has part: feature:2236121-2236309:1:exon
so has part: feature:2237805-2237942:1:exon
so has part: feature:2238821-2238904:1:exon
so has part: feature:2239477-2239642:1:exon
so has part: feature:2240193-2240344:1:exon
so has part: feature:2241410-2241640:1:exon

XP_032894523.1
type: Protein
SIO_000068: ncbiprotein

position:2184789:1
position: 2184789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2241640:1
position: 2241640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2184789-2184845:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2191870-2192063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2193024-2193230:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2193504-2193675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2193772-2193901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2194085-2194182:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2194898-2195011:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2196048-2196152:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2196552-2196641:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2199189-2199353:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2199500-2199628:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2201074-2201247:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2202294-2202389:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2202728-2202838:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2204861-2204953:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2205686-2205871:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2207768-2207862:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2209211-2209268:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2209351-2209476:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2209918-2210051:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2210330-2210504:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2213752-2213865:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2214441-2214569:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2214644-2214838:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2216093-2216219:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2217065-2217165:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2220033-2220158:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2220267-2220416:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2221994-2222197:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2223465-2223600:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2223968-2224161:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2226478-2226644:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2229221-2229244:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2229555-2229734:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2231695-2231815:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2232343-2232522:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2233498-2233685:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2235949-2236027:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2236121-2236309:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2237805-2237942:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2238821-2238904:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2239477-2239642:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2240193-2240344:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2241410-2241640:1:exon

ckap5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ckap5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 5 isoform X2
translation: MGDESEWIKLPIDQKCEHKVWKARLNGYEEAAKLFQKISDEKNPEWSKYLGLIKKFVTDSNAVAQLKGLEAALVYITNAHVAGKTAGEVVSGVVNKVFNQPKVRAKEMGIEICLMYMEIEKTEPVQEELVKGLDNKNPKIIVACIETLRKALGEFGSKIVQLKPIVKVLPKLFESREKAVRDEAKLLAVEVYKWIRDALRPPLQNINSVQLKELEEEWVKLPTSAPKQTRFLRSQQDLKAKFEQQQATGDEEGDDEEDDAPVVDAYELLEPVEILLKLPKDFYDKIEAKKWQERKEALEALELLVKNPRLESGDYSDVVRALKRVIGKDSNVLLVALGAKCLTGLAAGLRKKFQTYAGHVMPTLLEKFKEKKPQVVQALQEAIDTVFLTTTLQNLSEDVLAVMDNKNPSIKQQAALFLARSFCHCTPSTLPKSLLKPLCAALLKQINDSALEVRDAAFEALGTALKVVGERIMNPFLADVDKLKLEKIKEASDKVELAHGKKSNASKEANVGATGKGCSASSSGDKADASATRTGVLSKKTSANKSAGASKKMKAVVPPSGPSGKGKKAAEVKEDLSFDVCEEQAAAVLPATCLQQLDSSNWKERLASMEEFQKGVEVTEKKLLPCQALVRMLAKKPGWKETNFQVMQMKLHIVALIAQKGNFSRISAEVVMDGLVDKIGDIKCGVKAKEALTAIAAACSLPWTAEQVVAMAFAQKNPKNQSEILNWLAAAIKEFGFAGFNVKAFISHVKTALAATNPAVRISAVALLGVMYLYMGAPLRMFFEDEKPALLSQIDAEFEKMQGQAPPAAIRRVAKHDADEEEATEEQDDEENGNVQDLLPRTDIGDKITSDLVTKLGDKNWKIRKEGLDELCAILNEAKLIQPNIGDLPGALKGRLNDSNKILVQQTLAILQQMATAMGPNIRQHVKHLGIPIITVLGDSKNNVRAAALTTLNLWVEKTGMKEWLDGDDLSEELKKENPFLRQELLGWLAEKLPTLRTVPADLGHCLPHLYSCLEDRNGDVRKKAQDALPTFMMHLGYEKMNKVASKLKPASKDQVLTALEKAQAVVPAKTVAPTKTSSKSNAGAARPVGAASARVNCASANDETDSFKSDAKKGKSTGVASKLKSAPNKKVPSKPNVKDDDDRSGPLFIIIPNAKEQRVKDERALKVLKWNFTTPRDEYSEQLKTQMSSCVAKWVQDEMFHSDFHHHIKALTVLLEHLENEFEGTVACLDLILRWLTLRFFDTNTTVLMKVLEYLKLLFTLLSKEDYHLTENEGNSFIPYLINKVGESKDVIRKDVRSILNTLCKLYPASKMFNLIMDGLKSKNSKQRAECLEELGSLIEVHDLNVCQPTPAKALKEIASQIGDRDTSVRNAALNTVVTVYNICGDQVFKLIGNLSEKEMSMLEERIKRSAKKPSTVSVKQEEKTQRPPGTNQNAGMPRKGCEDVPSKLKIMYRTYRIQARCNNAQSASESTHTIPREFQLDLDKIENDNHAGRCELPDLVQHQLDELYEPVCIPEPKNRSVSPHYDEMHGTTDSTINFVVSQVASSEINTSIQALAQIDEVLRQESKVDAMSGHIDQFLIATFMQLRLIYNTHMADEKLNKSEILKLYSCIIGNMITLFQIEPLAKEASMGVLKDLMHGLILLMLDSRLEDLDEGPQVIRSINLLMVKVLEKSDPTNILSSLIVLLQDSLLATPNNSPKFSELILKCLWRVIRLLPNNINDVNVDRILLDLHNFMRVFPKERLKQMKCDLPMRTQKTLLHALYKLLGPKIMDHLTLIENKNESELEAHLRRVIKHSVGLSGGKTDSETEKGGSTIEDKESKAKISETLAEIFKKIGSKENTREGLAELYEYRKKYSDADIEPFLRKSSQFFQNYIERGLRLVENEREGKGRISSSSSSGFSSPPDEMPYVASSMSIPPSGNGEELGPAVYLERLKILRQRCGLENNSKHEERQPPTSLLSKPTVPTVASSSELLHNKLTHLRDSRECTQEQESHPPTQ…
SIO_010081: ckap5
subclass of: SO_0000673
so part of: ckap5
location: join(2184789..2184845,2191870..2192063,2193024..2193230,2193504..2193675,2193772..2193901,2194085..2194182,2194898..2195011,2196048..2196152,2196552..2196641,2199189..2199353,2199500..2199628,2201074..2201247,2202294..2202389,2202728..2202838,2204861..2204953,2205686..2205871,2207768..2207862,2209211..2209268,2209351..2209476,2209918..2210051,2210330..2210504,2213752..2213865,2214441..2214569,2214644..2214838,2216093..2216219,2217065..2217165,2220033..2220158,2220267..2220416,2221994..2222197,2223465..2223600,2223968..2224161,2226478..2226644,2229221..2229244,2229555..2229734,2231695..2231815,2232343..2232522,2233498..2233685,2235949..2236027,2236121..2236309,2237805..2237942,2238821..2238904,2239477..2239642,2240196..2240344,2241410..2241640)
location: region:2184789-2241640:1
so has part: feature:2184789-2184845:1:exon
so has part: feature:2191870-2192063:1:exon
so has part: feature:2193024-2193230:1:exon
so has part: feature:2193504-2193675:1:exon
so has part: feature:2193772-2193901:1:exon
so has part: feature:2194085-2194182:1:exon
so has part: feature:2194898-2195011:1:exon
so has part: feature:2196048-2196152:1:exon
so has part: feature:2196552-2196641:1:exon
so has part: feature:2199189-2199353:1:exon
so has part: feature:2199500-2199628:1:exon
so has part: feature:2201074-2201247:1:exon
so has part: feature:2202294-2202389:1:exon
so has part: feature:2202728-2202838:1:exon
so has part: feature:2204861-2204953:1:exon
so has part: feature:2205686-2205871:1:exon
so has part: feature:2207768-2207862:1:exon
so has part: feature:2209211-2209268:1:exon
so has part: feature:2209351-2209476:1:exon
so has part: feature:2209918-2210051:1:exon
so has part: feature:2210330-2210504:1:exon
so has part: feature:2213752-2213865:1:exon
so has part: feature:2214441-2214569:1:exon
so has part: feature:2214644-2214838:1:exon
so has part: feature:2216093-2216219:1:exon
so has part: feature:2217065-2217165:1:exon
so has part: feature:2220033-2220158:1:exon
so has part: feature:2220267-2220416:1:exon
so has part: feature:2221994-2222197:1:exon
so has part: feature:2223465-2223600:1:exon
so has part: feature:2223968-2224161:1:exon
so has part: feature:2226478-2226644:1:exon
so has part: feature:2229221-2229244:1:exon
so has part: feature:2229555-2229734:1:exon
so has part: feature:2231695-2231815:1:exon
so has part: feature:2232343-2232522:1:exon
so has part: feature:2233498-2233685:1:exon
so has part: feature:2235949-2236027:1:exon
so has part: feature:2236121-2236309:1:exon
so has part: feature:2237805-2237942:1:exon
so has part: feature:2238821-2238904:1:exon
so has part: feature:2239477-2239642:1:exon
so has part: feature:2240196-2240344:1:exon
so has part: feature:2241410-2241640:1:exon

XP_032894524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2184789-2184845:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2191870-2192063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2193024-2193230:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2193504-2193675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2193772-2193901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2194085-2194182:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2194898-2195011:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2196048-2196152:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2196552-2196641:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2199189-2199353:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2199500-2199628:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2201074-2201247:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2202294-2202389:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2202728-2202838:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2204861-2204953:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2205686-2205871:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2207768-2207862:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2209211-2209268:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2209351-2209476:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2209918-2210051:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2210330-2210504:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2213752-2213865:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2214441-2214569:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2214644-2214838:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2216093-2216219:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2217065-2217165:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2220033-2220158:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2220267-2220416:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2221994-2222197:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2223465-2223600:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2223968-2224161:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2226478-2226644:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2229221-2229244:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2229555-2229734:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2231695-2231815:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2232343-2232522:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2233498-2233685:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2235949-2236027:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2236121-2236309:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2237805-2237942:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2238821-2238904:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2239477-2239642:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2240196-2240344:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2241410-2241640:1:exon

ckap5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ckap5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 5 isoform X3
translation: MGDESEWIKLPIDQKCEHKVWKARLNGYEEAAKLFQKISDEKNPEWSKYLGLIKKFVTDSNAVAQLKGLEAALVYITNAHVAGKTAGEVVSGVVNKVFNQPKVRAKEMGIEICLMYMEIEKTEPVQEELVKGLDNKNPKIIVACIETLRKALGEFGSKIVQLKPIVKVLPKLFESREKAVRDEAKLLAVEVYKWIRDALRPPLQNINSVQLKELEEEWVKLPTSAPKQTRFLRSQQDLKAKFEQQQATGDEEGDDEEDDAPVVDAYELLEPVEILLKLPKDFYDKIEAKKWQERKEALEALELLVKNPRLESGDYSDVVRALKRVIGKDSNVLLVALGAKCLTGLAAGLRKKFQTYAGHVMPTLLEKFKEKKPQVVQALQEAIDTVFLTTTLQNLSEDVLAVMDNKNPSIKQQAALFLARSFCHCTPSTLPKSLLKPLCAALLKQINDSALEVRDAAFEALGTALKVVGERIMNPFLADVDKLKLEKIKEASDKVELAHGKKSNASKEANVGATGKGCSASSSGDKADASATRTGVLSKKTSANKSAGASKKMKAVVPPSGPSGKGKKAAEVKEDLSFDVCEEQAAAVLPATCLQQLDSSNWKERLASMEEFQKGVEVTEKKLLPCQALVRMLAKKPGWKETNFQVMQMKLHIVALIAQKGNFSRISAEVVMDGLVDKIGDIKCGVKAKEALTAIAAACSLPWTAEQVVAMAFAQKNPKNQSEILNWLAAAIKEFGFAGFNVKAFISHVKTALAATNPAVRISAVALLGVMYLYMGAPLRMFFEDEKPALLSQIDAEFEKMQGQAPPAAIRRVAKHDADEEEATEEQDDEENGNVQDLLPRTDIGDKITSDLVTKLGDKNWKIRKEGLDELCAILNEAKLIQPNIGDLPGALKGRLNDSNKILVQQTLAILQQMATAMGPNIRQHVKHLGIPIITVLGDSKNNVRAAALTTLNLWVEKTGMKEWLDGDDLSEELKKENPFLRQELLGWLAEKLPTLRTVPADLGHCLPHLYSCLEDRNGDVRKKAQDALPTFMMHLGYEKMNKVASKLKPASKDQVLTALEKAQAVVPAKTVAPTKTSSKSNAGAARPVGAASARVNCASANDETDSFKSDAKKGKSTGVASKLKSAPNKKVPSKPNVKDDDDRSGPLFIIIPNAKEQRVKDERALKVLKWNFTTPRDEYSEQLKTQMSSCVAKWVQDEMFHSDFHHHIKALTVLLEHLENEFEGTVACLDLILRWLTLRFFDTNTTVLMKVLEYLKLLFTLLSKEDYHLTENEGNSFIPYLINKVGESKDVIRKDVRSILNTLCKLYPASKMFNLIMDGLKSKNSKQRAECLEELGSLIEVHDLNVCQPTPAKALKEIASQIGDRDTSVRNAALNTVVTVYNICGDQVFKLIGNLSEKEMSMLEERIKRSAKKPSTVSVKQEEKTQRPPGTNQNAGMPRKGCEDVPSKLNQARCNNAQSASESTHTIPREFQLDLDKIENDNHAGRCELPDLVQHQLDELYEPVCIPEPKNRSVSPHYDEMHGTTDSTINFVVSQVASSEINTSIQALAQIDEVLRQESKVDAMSGHIDQFLIATFMQLRLIYNTHMADEKLNKSEILKLYSCIIGNMITLFQIEPLAKEASMGVLKDLMHGLILLMLDSRLEDLDEGPQVIRSINLLMVKVLEKSDPTNILSSLIVLLQDSLLATPNNSPKFSELILKCLWRVIRLLPNNINDVNVDRILLDLHNFMRVFPKERLKQMKCDLPMRTQKTLLHALYKLLGPKIMDHLTLIENKNESELEAHLRRVIKHSVGLSGGKTDSETEKGGSTIEDKESKAKISETLAEIFKKIGSKENTREGLAELYEYRKKYSDADIEPFLRKSSQFFQNYIERGLRLVENEREGKGRISSSSSSAGFSSPPDEMPYVASSMSIPPSGNGEELGPAVYLERLKILRQRCGLENNSKHEERQPPTSLLSKPTVPTVASSSELLHNKLTHLRDSRECTQEQESHPPTQTNSSTTS…
SIO_010081: ckap5
subclass of: SO_0000673
so part of: ckap5
location: join(2184789..2184845,2191870..2192063,2193024..2193230,2193504..2193675,2193772..2193901,2194085..2194182,2194898..2195011,2196048..2196152,2196552..2196641,2199189..2199353,2199500..2199628,2201074..2201247,2202294..2202389,2202728..2202838,2204861..2204953,2205686..2205871,2207768..2207862,2209211..2209268,2209351..2209476,2209918..2210051,2210330..2210504,2213752..2213865,2214441..2214569,2214644..2214838,2216093..2216219,2217065..2217165,2220033..2220158,2220267..2220416,2221994..2222197,2223465..2223600,2223968..2224161,2226478..2226644,2229555..2229734,2231695..2231815,2232343..2232522,2233498..2233685,2235949..2236027,2236121..2236309,2237805..2237942,2238821..2238904,2239477..2239642,2240193..2240344,2241410..2241640)
location: region:2184789-2241640:1
so has part: feature:2184789-2184845:1:exon
so has part: feature:2191870-2192063:1:exon
so has part: feature:2193024-2193230:1:exon
so has part: feature:2193504-2193675:1:exon
so has part: feature:2193772-2193901:1:exon
so has part: feature:2194085-2194182:1:exon
so has part: feature:2194898-2195011:1:exon
so has part: feature:2196048-2196152:1:exon
so has part: feature:2196552-2196641:1:exon
so has part: feature:2199189-2199353:1:exon
so has part: feature:2199500-2199628:1:exon
so has part: feature:2201074-2201247:1:exon
so has part: feature:2202294-2202389:1:exon
so has part: feature:2202728-2202838:1:exon
so has part: feature:2204861-2204953:1:exon
so has part: feature:2205686-2205871:1:exon
so has part: feature:2207768-2207862:1:exon
so has part: feature:2209211-2209268:1:exon
so has part: feature:2209351-2209476:1:exon
so has part: feature:2209918-2210051:1:exon
so has part: feature:2210330-2210504:1:exon
so has part: feature:2213752-2213865:1:exon
so has part: feature:2214441-2214569:1:exon
so has part: feature:2214644-2214838:1:exon
so has part: feature:2216093-2216219:1:exon
so has part: feature:2217065-2217165:1:exon
so has part: feature:2220033-2220158:1:exon
so has part: feature:2220267-2220416:1:exon
so has part: feature:2221994-2222197:1:exon
so has part: feature:2223465-2223600:1:exon
so has part: feature:2223968-2224161:1:exon
so has part: feature:2226478-2226644:1:exon
so has part: feature:2229555-2229734:1:exon
so has part: feature:2231695-2231815:1:exon
so has part: feature:2232343-2232522:1:exon
so has part: feature:2233498-2233685:1:exon
so has part: feature:2235949-2236027:1:exon
so has part: feature:2236121-2236309:1:exon
so has part: feature:2237805-2237942:1:exon
so has part: feature:2238821-2238904:1:exon
so has part: feature:2239477-2239642:1:exon
so has part: feature:2240193-2240344:1:exon
so has part: feature:2241410-2241640:1:exon

XP_032894525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2184789-2184845:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2191870-2192063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2193024-2193230:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2193504-2193675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2193772-2193901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2194085-2194182:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2194898-2195011:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2196048-2196152:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2196552-2196641:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2199189-2199353:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2199500-2199628:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2201074-2201247:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2202294-2202389:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2202728-2202838:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2204861-2204953:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2205686-2205871:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2207768-2207862:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2209211-2209268:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2209351-2209476:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2209918-2210051:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2210330-2210504:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2213752-2213865:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2214441-2214569:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2214644-2214838:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2216093-2216219:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2217065-2217165:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2220033-2220158:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2220267-2220416:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2221994-2222197:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2223465-2223600:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2223968-2224161:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2226478-2226644:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2229555-2229734:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2231695-2231815:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2232343-2232522:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2233498-2233685:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2235949-2236027:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2236121-2236309:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2237805-2237942:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2238821-2238904:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2239477-2239642:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2240193-2240344:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2241410-2241640:1:exon

LOC116984878
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984878
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2232821..2232928
location: region:2232821-2232928:1
so has part: feature:2232821-2232928:1:exon
subclass of: SO_0000578

116984878
type: Gene
SIO_000068: ncbigene

position:2232821:1
position: 2232821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2232928:1
position: 2232928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2232821-2232928:1:exon

LOC116984878
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snoRNA
gene: LOC116984878
product: small nucleolar RNA SNORD67
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00573
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004415153.1
SIO_010081: LOC116984878
subclass of: SO_0000673
so part of: LOC116984878
location: 2232821..2232928
location: region:2232821-2232928:1
so has part: feature:2232821-2232928:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2232821-2232928:1:exon

LOC116984432
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2322728..2341372
location: region:2322728-2341372:1
so has part: feature:2322728-2341372:1:exon
subclass of: SO_0000011

116984432
type: Gene
SIO_000068: ncbigene

position:2322728:1
position: 2322728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2341372:1
position: 2341372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2322728-2341372:1:exon

LOC116984432
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116984432
product: uncharacterized LOC116984432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004415012.1
SIO_010081: LOC116984432
subclass of: SO_0000673
so part of: LOC116984432
location: join(2322728..2322841,2325728..2325729,2341362..2341372)
location: region:2322728-2341372:1
so has part: feature:2322728-2322841:1:exon
so has part: feature:2325728-2325729:1:exon
so has part: feature:2341362-2341372:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2322728-2322841:1:exon

position:2322841:1
position: 2322841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2325728-2325729:1:exon

position:2325728:1
position: 2325728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2325729:1
position: 2325729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2341362-2341372:1:exon

position:2341362:1
position: 2341362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bdnf
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: bdnf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2386305..2401412
location: region:2386305-2401412:1
so has part: feature:2386305-2401412:1:exon
subclass of: SO_0000010

116984499
type: Gene
SIO_000068: ncbigene

position:2386305:1
position: 2386305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2401412:1
position: 2401412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2386305-2401412:1:exon

bdnf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: bdnf
product: brain derived neurotrophic factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 145 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033038636.1
SIO_010081: bdnf
subclass of: SO_0000673
so part of: bdnf
location: join(2386305..2386591,2399743..2401412)
location: region:2386305-2401412:1
so has part: feature:2386305-2386591:1:exon
so has part: feature:2399743-2401412:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2386305-2386591:1:exon

position:2386591:1
position: 2386591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2399743-2401412:1:exon

position:2399743:1
position: 2399743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bdnf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: bdnf
product: brain derived neurotrophic factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 153 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_033038635.1
SIO_010081: bdnf
subclass of: SO_0000673
so part of: bdnf
location: join(2387903..2388159,2399743..2401412)
location: region:2387903-2401412:1
so has part: feature:2387903-2388159:1:exon
so has part: feature:2399743-2401412:1:exon

position:2387903:1
position: 2387903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2387903-2388159:1:exon

position:2388159:1
position: 2388159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2399743-2401412:1:exon

bdnf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: bdnf
product: brain derived neurotrophic factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 145 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033038637.1
SIO_010081: bdnf
subclass of: SO_0000673
so part of: bdnf
location: join(2393982..2394123,2399743..2401412)
location: region:2393982-2401412:1
so has part: feature:2393982-2394123:1:exon
so has part: feature:2399743-2401412:1:exon

position:2393982:1
position: 2393982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2393982-2394123:1:exon

position:2394123:1
position: 2394123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2399743-2401412:1:exon

bdnf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: bdnf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brain-derived neurotrophic factor
translation: MVILVLAMVISYFGCPQAAPMKEAGASFYPGRPDGARDGMGPARGLGALAQTVEHVLEELLEEVDEPERPASDSDSDGGGNKEVDLYSSRVMLSGQVPLEPPLLFLMEEYRNYLEAANMSARVRRHSDPGRRGELSVCDSISQWVTADKKKTAVDMSGQTVSVLEKILVQNGQLKQYFYETKCNPKGFTNEGCRGIDKKHWNSQCRTSQSYVRALTMDSRKKIGWRFIRIDTSCVCTLTFKRGR
SIO_010081: bdnf
subclass of: SO_0000673
so part of: bdnf
location: 2399764..2400498
location: region:2399764-2400498:1
so has part: feature:2399764-2400498:1:exon

XP_032894526.1
type: Protein
SIO_000068: ncbiprotein

position:2399764:1
position: 2399764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2400498:1
position: 2400498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2399764-2400498:1:exon

bdnf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: bdnf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brain-derived neurotrophic factor
translation: MVILVLAMVISYFGCPQAAPMKEAGASFYPGRPDGARDGMGPARGLGALAQTVEHVLEELLEEVDEPERPASDSDSDGGGNKEVDLYSSRVMLSGQVPLEPPLLFLMEEYRNYLEAANMSARVRRHSDPGRRGELSVCDSISQWVTADKKKTAVDMSGQTVSVLEKILVQNGQLKQYFYETKCNPKGFTNEGCRGIDKKHWNSQCRTSQSYVRALTMDSRKKIGWRFIRIDTSCVCTLTFKRGR
SIO_010081: bdnf
subclass of: SO_0000673
so part of: bdnf
location: 2399764..2400498
location: region:2399764-2400498:1
so has part: feature:2399764-2400498:1:exon

XP_032894527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2399764-2400498:1:exon

bdnf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: bdnf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brain-derived neurotrophic factor
translation: MVILVLAMVISYFGCPQAAPMKEAGASFYPGRPDGARDGMGPARGLGALAQTVEHVLEELLEEVDEPERPASDSDSDGGGNKEVDLYSSRVMLSGQVPLEPPLLFLMEEYRNYLEAANMSARVRRHSDPGRRGELSVCDSISQWVTADKKKTAVDMSGQTVSVLEKILVQNGQLKQYFYETKCNPKGFTNEGCRGIDKKHWNSQCRTSQSYVRALTMDSRKKIGWRFIRIDTSCVCTLTFKRGR
SIO_010081: bdnf
subclass of: SO_0000673
so part of: bdnf
location: 2399764..2400498
location: region:2399764-2400498:1
so has part: feature:2399764-2400498:1:exon

XP_032894528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2399764-2400498:1:exon

lin7c
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: lin7c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2425987..2435651
location: region:2425987-2435651:1
so has part: feature:2425987-2435651:1:exon
subclass of: SO_0000010

116984500
type: Gene
SIO_000068: ncbigene

position:2425987:1
position: 2425987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2435651:1
position: 2435651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2425987-2435651:1:exon

lin7c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: lin7c
product: lin-7 homolog C, crumbs cell polarity complex component
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033038638.1
SIO_010081: lin7c
subclass of: SO_0000673
so part of: lin7c
location: join(2425987..2426073,2427183..2427301,2429446..2429517,2432004..2432213,2434859..2435651)
location: region:2425987-2435651:1
so has part: feature:2425987-2426073:1:exon
so has part: feature:2427183-2427301:1:exon
so has part: feature:2429446-2429517:1:exon
so has part: feature:2432004-2432213:1:exon
so has part: feature:2434859-2435651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2425987-2426073:1:exon

position:2426073:1
position: 2426073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2427183-2427301:1:exon

position:2427183:1
position: 2427183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2427301:1
position: 2427301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2429446-2429517:1:exon

position:2429446:1
position: 2429446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2429517:1
position: 2429517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2432004-2432213:1:exon

position:2432004:1
position: 2432004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2432213:1
position: 2432213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2434859-2435651:1:exon

position:2434859:1
position: 2434859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

lin7c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: lin7c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-7 homolog C
translation: MALLMEPIRLDRDVSRAIELLEKLQRTGEVPPQKLQALQRVLQSEFCVAVREVYEHVYETVDINSTPDVRANATAKATVAAFAASEGHSHPRVVELPKTDEGLGFNIMGGKEQNSPIYISRIIPAGIADRHGGLKRGDQLLSVNGESVEGEHHEKAVDLLKAAHGTVKLVVRYTPKVLEEMESRFEKMRSAKRRQQINY
SIO_010081: lin7c
subclass of: SO_0000673
so part of: lin7c
location: join(2426037..2426073,2427183..2427301,2429446..2429517,2432004..2432213,2434859..2435020)
location: region:2426037-2435020:1
so has part: feature:2426037-2426073:1:exon
so has part: feature:2427183-2427301:1:exon
so has part: feature:2429446-2429517:1:exon
so has part: feature:2432004-2432213:1:exon
so has part: feature:2434859-2435020:1:exon

XP_032894529.1
type: Protein
SIO_000068: ncbiprotein

position:2426037:1
position: 2426037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2435020:1
position: 2435020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2426037-2426073:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2427183-2427301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2429446-2429517:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2432004-2432213:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2434859-2435020:1:exon

kcna4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: kcna4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2555940..2605868)
location: region:2555940-2605868:-1
so has part: feature:2555940-2605868:-1:exon
subclass of: SO_0000010

116984502
type: Gene
SIO_000068: ncbigene

position:2555940:-1
position: 2555940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2605868:-1
position: 2605868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2555940-2605868:-1:exon

kcna4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kcna4
product: potassium voltage-gated channel subfamily A member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033038639.1
SIO_010081: kcna4
subclass of: SO_0000673
so part of: kcna4
location: complement(join(2555940..2556970,2602392..2605868))
location: region:2555940-2605868:-1
so has part: feature:2602392-2605868:-1:exon
so has part: feature:2555940-2556970:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2602392-2605868:-1:exon

position:2602392:-1
position: 2602392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2555940-2556970:-1:exon

position:2556970:-1
position: 2556970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

kcna4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kcna4
product: potassium voltage-gated channel subfamily A member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033038640.1
SIO_010081: kcna4
subclass of: SO_0000673
so part of: kcna4
location: complement(join(2588279..2588289,2602392..2605868))
location: region:2588279-2605868:-1
so has part: feature:2602392-2605868:-1:exon
so has part: feature:2588279-2588289:-1:exon

position:2588279:-1
position: 2588279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2602392-2605868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2588279-2588289:-1:exon

position:2588289:-1
position: 2588289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116984873
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984873
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 2599766..2599989
location: region:2599766-2599989:1
so has part: feature:2599766-2599989:1:exon

116984873
type: Gene
SIO_000068: ncbigene

position:2599766:1
position: 2599766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2599989:1
position: 2599989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2599766-2599989:1:exon

LOC116984873
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116984873
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116984873
subclass of: SO_0000673
so part of: LOC116984873
location: 2599766..2599989
location: region:2599766-2599989:1
so has part: feature:2599766-2599989:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2599766-2599989:1:exon

kcna4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kcna4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily A member 4
translation: MEGEEETTPPPSSPPPPSSTTTASSSPSITSASSSSSRRQYSVYSERVVINVSGLRFETRSQTLEHFPDTLLGDPARRMRHFDPLRNEYFFDRNRPSFDAILYYYQSGGRLKRPANVPFDIFCEEVKFYELGDEAVLRFREEEGFIKEQDKPLPRDEFKRQIWLLFEYPESSSPARGIAIVSVLVILISIVIFCLETLPEFRDERDFMPASRAGADNGSSRPSPSPSPSSSSTTTSSSSSTITTTTTSSSSSSSSVSTFSDPFFIVETVCIIWFSFELLVRFFACPSKPGFFKNIMNIIDIVSILPYFITLGTELANVQGGNGQQATSFAILRTIRLVRVFRIFKLSRHSKGLQILGQTLRASMRELGLLIFFLFIGVILFSSAVYFAEADDPKSHFTSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETENDEQSQVSQSCALPYLTSSFLKKFRSSSSLGNKSEYLEMEEGLKESLCTTQQSKDNGTETVKHNSVNLNAVETDV
SIO_010081: kcna4
subclass of: SO_0000673
so part of: kcna4
location: complement(2604176..2605786)
location: region:2604176-2605786:-1
so has part: feature:2604176-2605786:-1:exon

XP_032894530.1
type: Protein
SIO_000068: ncbiprotein

position:2604176:-1
position: 2604176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2605786:-1
position: 2605786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2604176-2605786:-1:exon

kcna4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kcna4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily A member 4
translation: MEGEEETTPPPSSPPPPSSTTTASSSPSITSASSSSSRRQYSVYSERVVINVSGLRFETRSQTLEHFPDTLLGDPARRMRHFDPLRNEYFFDRNRPSFDAILYYYQSGGRLKRPANVPFDIFCEEVKFYELGDEAVLRFREEEGFIKEQDKPLPRDEFKRQIWLLFEYPESSSPARGIAIVSVLVILISIVIFCLETLPEFRDERDFMPASRAGADNGSSRPSPSPSPSSSSTTTSSSSSTITTTTTSSSSSSSSVSTFSDPFFIVETVCIIWFSFELLVRFFACPSKPGFFKNIMNIIDIVSILPYFITLGTELANVQGGNGQQATSFAILRTIRLVRVFRIFKLSRHSKGLQILGQTLRASMRELGLLIFFLFIGVILFSSAVYFAEADDPKSHFTSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETENDEQSQVSQSCALPYLTSSFLKKFRSSSSLGNKSEYLEMEEGLKESLCTTQQSKDNGTETVKHNSVNLNAVETDV
SIO_010081: kcna4
subclass of: SO_0000673
so part of: kcna4
location: complement(2604176..2605786)
location: region:2604176-2605786:-1
so has part: feature:2604176-2605786:-1:exon

XP_032894531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2604176-2605786:-1:exon

LOC116984504
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984504
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2606352..2620322)
location: region:2606352-2620322:-1
so has part: feature:2606352-2620322:-1:exon
subclass of: SO_0000011

116984504
type: Gene
SIO_000068: ncbigene

position:2606352:-1
position: 2606352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2620322:-1
position: 2620322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2606352-2620322:-1:exon

LOC116984504
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116984504
product: uncharacterized LOC116984504
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004415049.1
SIO_010081: LOC116984504
subclass of: SO_0000673
so part of: LOC116984504
location: complement(join(2606352..2606460,2619949..2620030,2620147..2620322))
location: region:2606352-2620322:-1
so has part: feature:2620147-2620322:-1:exon
so has part: feature:2619949-2620030:-1:exon
so has part: feature:2606352-2606460:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2620147-2620322:-1:exon

position:2620147:-1
position: 2620147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2619949-2620030:-1:exon

position:2619949:-1
position: 2619949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2620030:-1
position: 2620030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2606352-2606460:-1:exon

position:2606460:-1
position: 2606460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fshb
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: fshb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2621552..2637699
location: region:2621552-2637699:1
so has part: feature:2621552-2637699:1:exon
subclass of: SO_0000010

116984503
type: Gene
SIO_000068: ncbigene

position:2621552:1
position: 2621552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2637699:1
position: 2637699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2621552-2637699:1:exon

fshb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fshb
product: follicle stimulating hormone subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033038641.1
SIO_010081: fshb
subclass of: SO_0000673
so part of: fshb
location: join(2621552..2621727,2634828..2635025,2637161..2637699)
location: region:2621552-2637699:1
so has part: feature:2621552-2621727:1:exon
so has part: feature:2634828-2635025:1:exon
so has part: feature:2637161-2637699:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2621552-2621727:1:exon

position:2621727:1
position: 2621727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2634828-2635025:1:exon

position:2634828:1
position: 2634828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2635025:1
position: 2635025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2637161-2637699:1:exon

position:2637161:1
position: 2637161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fshb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fshb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: follitropin subunit beta
translation: MISLMFQAMVPSKTFTIHLLLLVLCRASTVSMNKCQLTNITISVEREECGFCGTINVTWCSGYCFTKDPVCKHTLAFVYQEICSYKEIVYETMTIPNCPANVSPYYTYPVATSCQCGMCNTDTTDCTVSAMGPVHCSLEQPRRNDSSNSQITSNPSSRTNVKDI
SIO_010081: fshb
subclass of: SO_0000673
so part of: fshb
location: join(2621725..2621727,2634828..2635025,2637161..2637454)
location: region:2621725-2637454:1
so has part: feature:2621725-2621727:1:exon
so has part: feature:2634828-2635025:1:exon
so has part: feature:2637161-2637454:1:exon

XP_032894532.1
type: Protein
SIO_000068: ncbiprotein

position:2621725:1
position: 2621725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2637454:1
position: 2637454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2621725-2621727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2634828-2635025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2637161-2637454:1:exon

ano3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ano3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2677748..2873349)
location: region:2677748-2873349:-1
so has part: feature:2677748-2873349:-1:exon
subclass of: SO_0000010

116984506
type: Gene
SIO_000068: ncbigene

position:2677748:-1
position: 2677748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2873349:-1
position: 2873349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2677748-2873349:-1:exon

ano3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ano3
product: anoctamin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033038644.1
SIO_010081: ano3
subclass of: SO_0000673
so part of: ano3
location: complement(join(2677748..2678450,2680419..2680524,2681758..2681838,2685123..2685270,2705484..2705636,2707790..2707935,2709501..2709598,2713041..2713098,2717183..2717294,2719665..2719701,2720201..2720365,2721905..2722045,2723078..2723160,2741538..2741598,2746473..2746569,2747661..2747795,2750939..2751060,2759845..2759900,2762505..2762611,2764172..2764303,2774261..2774361,2776497..2776655,2780329..2780456,2781163..2781267,2783700..2783888,2840609..2840803,2842803..2842898,2873148..2873349))
location: region:2677748-2873349:-1
so has part: feature:2873148-2873349:-1:exon
so has part: feature:2842803-2842898:-1:exon
so has part: feature:2840609-2840803:-1:exon
so has part: feature:2783700-2783888:-1:exon
so has part: feature:2781163-2781267:-1:exon
so has part: feature:2780329-2780456:-1:exon
so has part: feature:2776497-2776655:-1:exon
so has part: feature:2774261-2774361:-1:exon
so has part: feature:2764172-2764303:-1:exon
so has part: feature:2762505-2762611:-1:exon
so has part: feature:2759845-2759900:-1:exon
so has part: feature:2750939-2751060:-1:exon
so has part: feature:2747661-2747795:-1:exon
so has part: feature:2746473-2746569:-1:exon
so has part: feature:2741538-2741598:-1:exon
so has part: feature:2723078-2723160:-1:exon
so has part: feature:2721905-2722045:-1:exon
so has part: feature:2720201-2720365:-1:exon
so has part: feature:2719665-2719701:-1:exon
so has part: feature:2717183-2717294:-1:exon
so has part: feature:2713041-2713098:-1:exon
so has part: feature:2709501-2709598:-1:exon
so has part: feature:2707790-2707935:-1:exon
so has part: feature:2705484-2705636:-1:exon
so has part: feature:2685123-2685270:-1:exon
so has part: feature:2681758-2681838:-1:exon
so has part: feature:2680419-2680524:-1:exon
so has part: feature:2677748-2678450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2873148-2873349:-1:exon

position:2873148:-1
position: 2873148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2842803-2842898:-1:exon

position:2842803:-1
position: 2842803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2842898:-1
position: 2842898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2840609-2840803:-1:exon

position:2840609:-1
position: 2840609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2840803:-1
position: 2840803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2783700-2783888:-1:exon

position:2783700:-1
position: 2783700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2783888:-1
position: 2783888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2781163-2781267:-1:exon

position:2781163:-1
position: 2781163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2781267:-1
position: 2781267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2780329-2780456:-1:exon

position:2780329:-1
position: 2780329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2780456:-1
position: 2780456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2776497-2776655:-1:exon

position:2776497:-1
position: 2776497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2776655:-1
position: 2776655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2774261-2774361:-1:exon

position:2774261:-1
position: 2774261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2774361:-1
position: 2774361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2764172-2764303:-1:exon

position:2764172:-1
position: 2764172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2764303:-1
position: 2764303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2762505-2762611:-1:exon

position:2762505:-1
position: 2762505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2762611:-1
position: 2762611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2759845-2759900:-1:exon

position:2759845:-1
position: 2759845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2759900:-1
position: 2759900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2750939-2751060:-1:exon

position:2750939:-1
position: 2750939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2751060:-1
position: 2751060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2747661-2747795:-1:exon

position:2747661:-1
position: 2747661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2747795:-1
position: 2747795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2746473-2746569:-1:exon

position:2746473:-1
position: 2746473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2746569:-1
position: 2746569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2741538-2741598:-1:exon

position:2741538:-1
position: 2741538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2741598:-1
position: 2741598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2723078-2723160:-1:exon

position:2723078:-1
position: 2723078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2723160:-1
position: 2723160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2721905-2722045:-1:exon

position:2721905:-1
position: 2721905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2722045:-1
position: 2722045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2720201-2720365:-1:exon

position:2720201:-1
position: 2720201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2720365:-1
position: 2720365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2719665-2719701:-1:exon

position:2719665:-1
position: 2719665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2719701:-1
position: 2719701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2717183-2717294:-1:exon

position:2717183:-1
position: 2717183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2717294:-1
position: 2717294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2713041-2713098:-1:exon

position:2713041:-1
position: 2713041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2713098:-1
position: 2713098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2709501-2709598:-1:exon

position:2709501:-1
position: 2709501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2709598:-1
position: 2709598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2707790-2707935:-1:exon

position:2707790:-1
position: 2707790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2707935:-1
position: 2707935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2705484-2705636:-1:exon

position:2705484:-1
position: 2705484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2705636:-1
position: 2705636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2685123-2685270:-1:exon

position:2685123:-1
position: 2685123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2685270:-1
position: 2685270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2681758-2681838:-1:exon

position:2681758:-1
position: 2681758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2681838:-1
position: 2681838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2680419-2680524:-1:exon

position:2680419:-1
position: 2680419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2680524:-1
position: 2680524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2677748-2678450:-1:exon

position:2678450:-1
position: 2678450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ano3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ano3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-3
translation: MDVEASDVDPSDVDHKPGSQGGNPADDTRGLLDVISQETQNDTEGQTPASASPAVSEVLVQDVSCSCTENEDGTLLLNTEWEDADVGLEILEEALPCLEGPLKDEFLSLWLEGHDLSHGDDSLLQPTDTLPFTFSSSSSSASPEMLKDWETGMNTSVSGVVTEQPLKPSRRSLPCLAQSQTLPNHLSNHSLQQGSHLQDTLSAGPCTTDIPVQSEKTGSSVNDLLYGSQQDSQPKPWAPESVPICIIPQDDDQEWSTAESEQRTYDSQTDHIFLLQTSTQQILLEPPSDERMDKELSVSENSLFFKDGRKRIDYILVYKKTDMHVEKRSTFEKNLRAEGLQLEREQSITNADVMFVKLHAPWETICKYAEIMNIRMPFSVQKSMRHVKSWLPRNPMQLDKEALPDLEEAESYTAPFSRARMHHFTINNKDTFFSNSTRSRIVHHVLQRTKYEDGKSKMGLNRLLSNGTYVAAYPPHEGSYKSRHDIITHGALNHRHLLYERWARWGMWYKYQPLDLIRRYFGEKIGLYFAWLGWYTGMLIPAALVGVLVFLYGLLTSDHSQVSKEICDANDTLMCPMCERNCSYWMLSESCAYAKMTHLFDNGGTVFFAIFMALWATVFLEFWKRRRAVLTYNWDLIDWEEEEEELRPQFEAKYSKKERLNPITGKPEPFQPFVDKLSRLLVSVSGIFFMILLVLAAVFGVVLYRLVTMELFASFRWEFVKKNWQFATAGSGVCINFAIIMSLNVVYERVARMLTNWEHPRTESEWENSFALKMFLFEFVNLNSSIFYVAFILGRFAGRPGAYAKLFHRWRLEECHPSGCLIDLCMQMGIIMVLKQMWNNFMELGYPLLQNWWSRRKVKRASHDEASKYYLPQWEQDWNLQPMNNHGLVDEYLEMVLQFGFTTIFVAAFPLAPLLALLNNIIEIRLDAYKFVTQWRRPLPARAKDIGNWYGILEGIGVMAVITNAFVIAITSDYIPRFVYTYKYGPCADQGYSDDKCLTGYVSESLAYFNKSEFGTHDTGYCRYRDYRAPPWDPNRYEVTLQFWHVLAARLAFIIVFEHFVFGFKAFIAYLIPDMPKDLCDRMRREKYLVQEMMYEAELEHLQKERKRSGSRYHEWP
SIO_010081: ano3
subclass of: SO_0000673
so part of: ano3
location: complement(join(2678271..2678450,2680419..2680524,2681758..2681838,2685123..2685270,2705484..2705636,2707790..2707935,2709501..2709598,2713041..2713098,2717183..2717294,2719665..2719701,2720201..2720365,2721905..2722045,2723078..2723160,2741538..2741598,2746473..2746569,2747661..2747795,2750939..2751060,2759845..2759900,2762505..2762611,2764172..2764303,2774261..2774361,2776497..2776655,2780329..2780456,2781163..2781267,2783700..2783888,2840609..2840803,2842803..2842898,2873148..2873310))
location: region:2678271-2873310:-1
so has part: feature:2873148-2873310:-1:exon
so has part: feature:2842803-2842898:-1:exon
so has part: feature:2840609-2840803:-1:exon
so has part: feature:2783700-2783888:-1:exon
so has part: feature:2781163-2781267:-1:exon
so has part: feature:2780329-2780456:-1:exon
so has part: feature:2776497-2776655:-1:exon
so has part: feature:2774261-2774361:-1:exon
so has part: feature:2764172-2764303:-1:exon
so has part: feature:2762505-2762611:-1:exon
so has part: feature:2759845-2759900:-1:exon
so has part: feature:2750939-2751060:-1:exon
so has part: feature:2747661-2747795:-1:exon
so has part: feature:2746473-2746569:-1:exon
so has part: feature:2741538-2741598:-1:exon
so has part: feature:2723078-2723160:-1:exon
so has part: feature:2721905-2722045:-1:exon
so has part: feature:2720201-2720365:-1:exon
so has part: feature:2719665-2719701:-1:exon
so has part: feature:2717183-2717294:-1:exon
so has part: feature:2713041-2713098:-1:exon
so has part: feature:2709501-2709598:-1:exon
so has part: feature:2707790-2707935:-1:exon
so has part: feature:2705484-2705636:-1:exon
so has part: feature:2685123-2685270:-1:exon
so has part: feature:2681758-2681838:-1:exon
so has part: feature:2680419-2680524:-1:exon
so has part: feature:2678271-2678450:-1:exon

XP_032894535.1
type: Protein
SIO_000068: ncbiprotein

position:2678271:-1
position: 2678271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2873310:-1
position: 2873310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2873148-2873310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2842803-2842898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2840609-2840803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2783700-2783888:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2781163-2781267:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2780329-2780456:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2776497-2776655:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2774261-2774361:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2764172-2764303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2762505-2762611:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2759845-2759900:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2750939-2751060:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2747661-2747795:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2746473-2746569:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2741538-2741598:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2723078-2723160:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2721905-2722045:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2720201-2720365:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2719665-2719701:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2717183-2717294:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2713041-2713098:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2709501-2709598:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2707790-2707935:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2705484-2705636:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2685123-2685270:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2681758-2681838:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2680419-2680524:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2678271-2678450:-1:exon

muc15
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: muc15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2730620..2741424
location: region:2730620-2741424:1
so has part: feature:2730620-2741424:1:exon
subclass of: SO_0000010

116984505
type: Gene
SIO_000068: ncbigene

position:2730620:1
position: 2730620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2741424:1
position: 2741424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2730620-2741424:1:exon

muc15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: muc15
product: mucin 15, cell surface associated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033038643.1
SIO_010081: muc15
subclass of: SO_0000673
so part of: muc15
location: join(2730620..2730788,2733668..2734223,2734263..2734601,2735997..2736161,2741213..2741424)
location: region:2730620-2741424:1
so has part: feature:2730620-2730788:1:exon
so has part: feature:2733668-2734223:1:exon
so has part: feature:2734263-2734601:1:exon
so has part: feature:2735997-2736161:1:exon
so has part: feature:2741213-2741424:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2730620-2730788:1:exon

position:2730788:1
position: 2730788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2733668-2734223:1:exon

position:2733668:1
position: 2733668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2734223:1
position: 2734223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2734263-2734601:1:exon

position:2734263:1
position: 2734263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2734601:1
position: 2734601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2735997-2736161:1:exon

position:2735997:1
position: 2735997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2736161:1
position: 2736161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2741213-2741424:1:exon

position:2741213:1
position: 2741213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

muc15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: muc15
product: mucin 15, cell surface associated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033038642.1
SIO_010081: muc15
subclass of: SO_0000673
so part of: muc15
location: join(2730622..2730788,2733668..2734601,2735997..2736161,2741213..2741424)
location: region:2730622-2741424:1
so has part: feature:2730622-2730788:1:exon
so has part: feature:2733668-2734601:1:exon
so has part: feature:2735997-2736161:1:exon
so has part: feature:2741213-2741424:1:exon

position:2730622:1
position: 2730622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2730622-2730788:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2733668-2734601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2735997-2736161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2741213-2741424:1:exon

muc15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: muc15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-15 isoform X1
translation: MELYLMVLIASCLTCQLLTIGSAQSSTVPTTASESLTTSSTLPTSVNTSTAAPSAEPTSDPGFTLNTATTNVASSEDSTSVSMLTVSSLNDHTTTGSTETTSDLDTSTANATITSMVTSSRPTTDNTATGDTSATDSVPTGAGNSSTTAPDNHNSTTSPNSTSMASPSPASPTSNSPVSPTSNTTSPNSTSPSPVSPTSNSTSPASPVSPTSNTTSPNSTSPSPVSPTSNTTSPNSTSPSPVSPTSNTTSPNSTSPASSPTTNSTTMLRSSTVATPPNTFTTDTTINTTNGTTANNGKDLNVIRHRGGVIIGAVLGSVLGILLVLLLAYLYCTRKKPVNIAHRRLYENFPNEPVLRLNTDDAVEFRYQDGAAYYNPSALNDHNESLGNENYGIQMDDMPYENVA
SIO_010081: muc15
subclass of: SO_0000673
so part of: muc15
location: join(2733707..2734601,2735997..2736161,2741213..2741367)
location: region:2733707-2741367:1
so has part: feature:2733707-2734601:1:exon
so has part: feature:2735997-2736161:1:exon
so has part: feature:2741213-2741367:1:exon

XP_032894533.1
type: Protein
SIO_000068: ncbiprotein

position:2733707:1
position: 2733707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2741367:1
position: 2741367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2733707-2734601:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2735997-2736161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2741213-2741367:1:exon

muc15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: muc15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-15 isoform X2
translation: MELYLMVLIASCLTCQLLTIGSAQSSTVPTTASESLTTSSTLPTSVNTSTAAPSAEPTSDPGFTLNTATTNVASSEDSTSVSMLTVSSLNDHTTTGSTETTSDLDTSTANATITSMVTSSRPTTDNTATGDTSATDSVPTGAGNSSTTAPDNHNSTTSPNSTSMASPSPASPTPNSTSPSPVSPTSNSTSPASPVSPTSNTTSPNSTSPSPVSPTSNTTSPNSTSPSPVSPTSNTTSPNSTSPASSPTTNSTTMLRSSTVATPPNTFTTDTTINTTNGTTANNGKDLNVIRHRGGVIIGAVLGSVLGILLVLLLAYLYCTRKKPVNIAHRRLYENFPNEPVLRLNTDDAVEFRYQDGAAYYNPSALNDHNESLGNENYGIQMDDMPYENVA
SIO_010081: muc15
subclass of: SO_0000673
so part of: muc15
location: join(2733707..2734223,2734263..2734601,2735997..2736161,2741213..2741367)
location: region:2733707-2741367:1
so has part: feature:2733707-2734223:1:exon
so has part: feature:2734263-2734601:1:exon
so has part: feature:2735997-2736161:1:exon
so has part: feature:2741213-2741367:1:exon

XP_032894534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2733707-2734223:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2734263-2734601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2735997-2736161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2741213-2741367:1:exon

luzp2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: luzp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2992773..3178705)
location: region:2992773-3178705:-1
so has part: feature:2992773-3178705:-1:exon
subclass of: SO_0000010

116984507
type: Gene
SIO_000068: ncbigene

position:2992773:-1
position: 2992773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3178705:-1
position: 3178705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2992773-3178705:-1:exon

luzp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: luzp2
product: leucine zipper protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033038646.1
SIO_010081: luzp2
subclass of: SO_0000673
so part of: luzp2
location: complement(join(2992773..2993688,2996335..2996409,3001673..3001783,3016501..3016575,3027534..3027596,3028033..3028095,3044519..3044581,3044740..3044821,3058097..3058167,3070187..3070304,3178390..3178705))
location: region:2992773-3178705:-1
so has part: feature:3178390-3178705:-1:exon
so has part: feature:3070187-3070304:-1:exon
so has part: feature:3058097-3058167:-1:exon
so has part: feature:3044740-3044821:-1:exon
so has part: feature:3044519-3044581:-1:exon
so has part: feature:3028033-3028095:-1:exon
so has part: feature:3027534-3027596:-1:exon
so has part: feature:3016501-3016575:-1:exon
so has part: feature:3001673-3001783:-1:exon
so has part: feature:2996335-2996409:-1:exon
so has part: feature:2992773-2993688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3178390-3178705:-1:exon

position:3178390:-1
position: 3178390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3070187-3070304:-1:exon

position:3070187:-1
position: 3070187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3070304:-1
position: 3070304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3058097-3058167:-1:exon

position:3058097:-1
position: 3058097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3058167:-1
position: 3058167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3044740-3044821:-1:exon

position:3044740:-1
position: 3044740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3044821:-1
position: 3044821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3044519-3044581:-1:exon

position:3044519:-1
position: 3044519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3044581:-1
position: 3044581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3028033-3028095:-1:exon

position:3028033:-1
position: 3028033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3028095:-1
position: 3028095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3027534-3027596:-1:exon

position:3027534:-1
position: 3027534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3027596:-1
position: 3027596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3016501-3016575:-1:exon

position:3016501:-1
position: 3016501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3016575:-1
position: 3016575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3001673-3001783:-1:exon

position:3001673:-1
position: 3001673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3001783:-1
position: 3001783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2996335-2996409:-1:exon

position:2996335:-1
position: 2996335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2996409:-1
position: 2996409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2992773-2993688:-1:exon

position:2993688:-1
position: 2993688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

luzp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: luzp2
product: leucine zipper protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033038645.1
SIO_010081: luzp2
subclass of: SO_0000673
so part of: luzp2
location: complement(join(2992773..2993688,2996335..2996409,3001673..3001783,3013269..3013433,3016501..3016575,3027534..3027596,3028033..3028095,3044519..3044581,3044740..3044821,3058097..3058167,3070187..3070304,3178390..3178705))
location: region:2992773-3178705:-1
so has part: feature:3178390-3178705:-1:exon
so has part: feature:3070187-3070304:-1:exon
so has part: feature:3058097-3058167:-1:exon
so has part: feature:3044740-3044821:-1:exon
so has part: feature:3044519-3044581:-1:exon
so has part: feature:3028033-3028095:-1:exon
so has part: feature:3027534-3027596:-1:exon
so has part: feature:3016501-3016575:-1:exon
so has part: feature:3013269-3013433:-1:exon
so has part: feature:3001673-3001783:-1:exon
so has part: feature:2996335-2996409:-1:exon
so has part: feature:2992773-2993688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3178390-3178705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3070187-3070304:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3058097-3058167:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3044740-3044821:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3044519-3044581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3028033-3028095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3027534-3027596:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3016501-3016575:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3013269-3013433:-1:exon

position:3013269:-1
position: 3013269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3013433:-1
position: 3013433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3001673-3001783:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2996335-2996409:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2992773-2993688:-1:exon

luzp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: luzp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine zipper protein 2 isoform X2
translation: MNLPCLCYILSSLFIAALAASSRRGSDDLERKLKKISTEKSSFLQQLSKSTPDRQGMKGSLQSLKTDGTVTKNDVQKLLEISQKQKDEMKSLQEALEKEINEATLKAEKQQAGINFLKSEVERKSKLIKDLQQENKSLKNKLLSGNKQCGIHAEESKRIQSQLKELRYGKKDLIFKAQQLTDLEHKLLAAKQELEKTEGDKLQAVSQAEETNSPNNEPFLHEATKSNDEDAVDCSLHKAGKNCSTNNPPAK
SIO_010081: luzp2
subclass of: SO_0000673
so part of: luzp2
location: complement(join(2996368..2996409,3001673..3001783,3016501..3016575,3027534..3027596,3028033..3028095,3044519..3044581,3044740..3044821,3058097..3058167,3070187..3070304,3178390..3178457))
location: region:2996368-3178457:-1
so has part: feature:3178390-3178457:-1:exon
so has part: feature:3070187-3070304:-1:exon
so has part: feature:3058097-3058167:-1:exon
so has part: feature:3044740-3044821:-1:exon
so has part: feature:3044519-3044581:-1:exon
so has part: feature:3028033-3028095:-1:exon
so has part: feature:3027534-3027596:-1:exon
so has part: feature:3016501-3016575:-1:exon
so has part: feature:3001673-3001783:-1:exon
so has part: feature:2996368-2996409:-1:exon

XP_032894537.1
type: Protein
SIO_000068: ncbiprotein

position:2996368:-1
position: 2996368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3178457:-1
position: 3178457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3178390-3178457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3070187-3070304:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3058097-3058167:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3044740-3044821:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3044519-3044581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3028033-3028095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3027534-3027596:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3016501-3016575:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3001673-3001783:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2996368-2996409:-1:exon

luzp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: luzp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine zipper protein 2 isoform X1
translation: MNLPCLCYILSSLFIAALAASSRRGSDDLERKLKKISTEKSSFLQQLSKSTPDRQGMKGSLQSLKTDGTVTKNDVQKLLEISQKQKDEMKSLQEALEKEINEATLKAEKQQAGINFLKSEVERKSKLIKDLQQENKSLKNKLLSGNKQCGIHAEESKRIQSQLKELRYGKKDLIFKAQQLTDLEHKLLAAKQELEKTEGDKESQLRALKEVARLCVSGILRNQSPFMSIIPPRNAENGILLNKNTSRFPSYQPSTKLQAVSQAEETNSPNNEPFLHEATKSNDEDAVDCSLHKAGKNCSTNNPPAK
SIO_010081: luzp2
subclass of: SO_0000673
so part of: luzp2
location: complement(join(2996368..2996409,3001673..3001783,3013269..3013433,3016501..3016575,3027534..3027596,3028033..3028095,3044519..3044581,3044740..3044821,3058097..3058167,3070187..3070304,3178390..3178457))
location: region:2996368-3178457:-1
so has part: feature:3178390-3178457:-1:exon
so has part: feature:3070187-3070304:-1:exon
so has part: feature:3058097-3058167:-1:exon
so has part: feature:3044740-3044821:-1:exon
so has part: feature:3044519-3044581:-1:exon
so has part: feature:3028033-3028095:-1:exon
so has part: feature:3027534-3027596:-1:exon
so has part: feature:3016501-3016575:-1:exon
so has part: feature:3013269-3013433:-1:exon
so has part: feature:3001673-3001783:-1:exon
so has part: feature:2996368-2996409:-1:exon

XP_032894536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3178390-3178457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3070187-3070304:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3058097-3058167:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3044740-3044821:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3044519-3044581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3028033-3028095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3027534-3027596:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3016501-3016575:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3013269-3013433:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3001673-3001783:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2996368-2996409:-1:exon

LOC116984509
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3105340..3122307)
location: region:3105340-3122307:-1
so has part: feature:3105340-3122307:-1:exon
subclass of: SO_0000011

116984509
type: Gene
SIO_000068: ncbigene

position:3105340:-1
position: 3105340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3122307:-1
position: 3122307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3105340-3122307:-1:exon

LOC116984509
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116984509
product: uncharacterized LOC116984509
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004415050.1
SIO_010081: LOC116984509
subclass of: SO_0000673
so part of: LOC116984509
location: complement(join(3105340..3105386,3119894..3119959,3122286..3122307))
location: region:3105340-3122307:-1
so has part: feature:3122286-3122307:-1:exon
so has part: feature:3119894-3119959:-1:exon
so has part: feature:3105340-3105386:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3122286-3122307:-1:exon

position:3122286:-1
position: 3122286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3119894-3119959:-1:exon

position:3119894:-1
position: 3119894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3119959:-1
position: 3119959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3105340-3105386:-1:exon

position:3105386:-1
position: 3105386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116984510
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3321580..3329881
location: region:3321580-3329881:1
so has part: feature:3321580-3329881:1:exon
subclass of: SO_0000010

116984510
type: Gene
SIO_000068: ncbigene

position:3321580:1
position: 3321580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3329881:1
position: 3329881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3321580-3329881:1:exon

LOC116984510
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984510
product: small VCP interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033038647.1
SIO_010081: LOC116984510
subclass of: SO_0000673
so part of: LOC116984510
location: join(3321580..3321605,3321646..3321717,3327849..3327899,3329176..3329289,3329412..3329881)
location: region:3321580-3329881:1
so has part: feature:3321580-3321605:1:exon
so has part: feature:3321646-3321717:1:exon
so has part: feature:3327849-3327899:1:exon
so has part: feature:3329176-3329289:1:exon
so has part: feature:3329412-3329881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3321580-3321605:1:exon

position:3321605:1
position: 3321605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3321646-3321717:1:exon

position:3321646:1
position: 3321646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3321717:1
position: 3321717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3327849-3327899:1:exon

position:3327849:1
position: 3327849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3327899:1
position: 3327899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3329176-3329289:1:exon

position:3329176:1
position: 3329176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3329289:1
position: 3329289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3329412-3329881:1:exon

position:3329412:1
position: 3329412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116984510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small VCP/p97-interacting protein
translation: MGMCLPCLGGATEDVVQTPDPDTRRKQLADAAEKRQKENVHRGVKNPEAVERKKRKQEEMEKQQMNTSSSGGGGLRWQVG
SIO_010081: LOC116984510
subclass of: SO_0000673
so part of: LOC116984510
location: join(3321655..3321717,3327849..3327899,3329176..3329289,3329412..3329426)
location: region:3321655-3329426:1
so has part: feature:3321655-3321717:1:exon
so has part: feature:3327849-3327899:1:exon
so has part: feature:3329176-3329289:1:exon
so has part: feature:3329412-3329426:1:exon

XP_032894538.1
type: Protein
SIO_000068: ncbiprotein

position:3321655:1
position: 3321655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3329426:1
position: 3329426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3321655-3321717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3327849-3327899:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3329176-3329289:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3329412-3329426:1:exon

gas2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: gas2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3342868..3446552)
location: region:3342868-3446552:-1
so has part: feature:3342868-3446552:-1:exon
subclass of: SO_0000010

116984512
type: Gene
SIO_000068: ncbigene

position:3342868:-1
position: 3342868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3446552:-1
position: 3446552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3342868-3446552:-1:exon

gas2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gas2
product: growth arrest specific 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033038652.1
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3342868..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415891,3444108..3444247,3444500..3444617,3446443..3446552))
location: region:3342868-3446552:-1
so has part: feature:3446443-3446552:-1:exon
so has part: feature:3444500-3444617:-1:exon
so has part: feature:3444108-3444247:-1:exon
so has part: feature:3415733-3415891:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3342868-3343467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3446443-3446552:-1:exon

position:3446443:-1
position: 3446443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3444500-3444617:-1:exon

position:3444500:-1
position: 3444500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3444617:-1
position: 3444617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3444108-3444247:-1:exon

position:3444108:-1
position: 3444108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3444247:-1
position: 3444247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3415733-3415891:-1:exon

position:3415733:-1
position: 3415733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3415891:-1
position: 3415891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3397214-3397335:-1:exon

position:3397214:-1
position: 3397214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3397335:-1
position: 3397335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3380129-3380270:-1:exon

position:3380129:-1
position: 3380129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3380270:-1
position: 3380270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3373974-3374037:-1:exon

position:3373974:-1
position: 3373974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3374037:-1
position: 3374037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3360969-3361107:-1:exon

position:3360969:-1
position: 3360969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3361107:-1
position: 3361107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3359851-3359958:-1:exon

position:3359851:-1
position: 3359851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3359958:-1
position: 3359958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3342868-3343467:-1:exon

position:3343467:-1
position: 3343467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

gas2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gas2
product: growth arrest specific 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033038654.1
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3342868..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415891,3444108..3444247,3446443..3446542))
location: region:3342868-3446542:-1
so has part: feature:3446443-3446542:-1:exon
so has part: feature:3444108-3444247:-1:exon
so has part: feature:3415733-3415891:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3342868-3343467:-1:exon

position:3446542:-1
position: 3446542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3446443-3446542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3444108-3444247:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3415733-3415891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3397214-3397335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3380129-3380270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3373974-3374037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3360969-3361107:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3359851-3359958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3342868-3343467:-1:exon

gas2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gas2
product: growth arrest specific 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033038651.1
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3342868..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415891,3444108..3444247,3444500..3444749))
location: region:3342868-3444749:-1
so has part: feature:3444500-3444749:-1:exon
so has part: feature:3444108-3444247:-1:exon
so has part: feature:3415733-3415891:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3342868-3343467:-1:exon

position:3444749:-1
position: 3444749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3444500-3444749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3444108-3444247:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3415733-3415891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3397214-3397335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3380129-3380270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3373974-3374037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3360969-3361107:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3359851-3359958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3342868-3343467:-1:exon

gas2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gas2
product: growth arrest specific 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033038656.1
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3342868..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415891,3417737..3417860))
location: region:3342868-3417860:-1
so has part: feature:3417737-3417860:-1:exon
so has part: feature:3415733-3415891:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3342868-3343467:-1:exon

position:3417860:-1
position: 3417860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3417737-3417860:-1:exon

position:3417737:-1
position: 3417737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3415733-3415891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3397214-3397335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3380129-3380270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3373974-3374037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3360969-3361107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3359851-3359958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3342868-3343467:-1:exon

gas2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gas2
product: growth arrest specific 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_033038653.1
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3342868..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415891,3417246..3417502))
location: region:3342868-3417502:-1
so has part: feature:3417246-3417502:-1:exon
so has part: feature:3415733-3415891:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3342868-3343467:-1:exon

position:3417502:-1
position: 3417502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3417246-3417502:-1:exon

position:3417246:-1
position: 3417246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3415733-3415891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3397214-3397335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3380129-3380270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3373974-3374037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3360969-3361107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3359851-3359958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3342868-3343467:-1:exon

gas2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gas2
product: growth arrest specific 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033038650.1
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3342868..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415891,3417241..3417501))
location: region:3342868-3417501:-1
so has part: feature:3417241-3417501:-1:exon
so has part: feature:3415733-3415891:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3342868-3343467:-1:exon

position:3417501:-1
position: 3417501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3417241-3417501:-1:exon

position:3417241:-1
position: 3417241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3415733-3415891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3397214-3397335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3380129-3380270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3373974-3374037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3360969-3361107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3359851-3359958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3342868-3343467:-1:exon

gas2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gas2
product: growth arrest specific 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033038655.1
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3342868..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415891,3417070..3417221))
location: region:3342868-3417221:-1
so has part: feature:3417070-3417221:-1:exon
so has part: feature:3415733-3415891:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3342868-3343467:-1:exon

position:3417221:-1
position: 3417221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3417070-3417221:-1:exon

position:3417070:-1
position: 3417070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3415733-3415891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3397214-3397335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3380129-3380270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3373974-3374037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3360969-3361107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3359851-3359958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3342868-3343467:-1:exon

gas2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gas2
product: growth arrest specific 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033038657.1
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3342868..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415891,3417048..3417195))
location: region:3342868-3417195:-1
so has part: feature:3417048-3417195:-1:exon
so has part: feature:3415733-3415891:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3342868-3343467:-1:exon

position:3417195:-1
position: 3417195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3417048-3417195:-1:exon

position:3417048:-1
position: 3417048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3415733-3415891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3397214-3397335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3380129-3380270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3373974-3374037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3360969-3361107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3359851-3359958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3342868-3343467:-1:exon

gas2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gas2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 2
translation: MYSTFSSPKEPGPSLSDVHQYGQWLASRHEASLLPMKEDLALWLTNLLGKEITAESFMGKLDNGALLCQLAQTLQEKFKENNSENKVAKRLLLKKIPCRANAPPGSFFARDNTANFLSWCREVGVDDTCLFESEGLVLHKQPREVCLCLLELGRIACRFGVEPSGLVKLEKEIEQEESHSTPPPSPSPTKSPGKKSAGKLLDDAVKHISEDPPCKCPQKFYVERLSQGRYRVGEKILFIRMLHNKHVMVRVGGGWETFEGYLLKHDPCRILQISRVDGKTSPVPNKSLPIKDPSPDSYLVVAAHYRSRRENASHNSGNWGTK
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3343219..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415877))
location: region:3343219-3415877:-1
so has part: feature:3415733-3415877:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3343219-3343467:-1:exon

XP_032894541.1
type: Protein
SIO_000068: ncbiprotein

position:3343219:-1
position: 3343219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3415877:-1
position: 3415877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3415733-3415877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3397214-3397335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3380129-3380270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3373974-3374037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3360969-3361107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359851-3359958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3343219-3343467:-1:exon

gas2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gas2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 2
translation: MYSTFSSPKEPGPSLSDVHQYGQWLASRHEASLLPMKEDLALWLTNLLGKEITAESFMGKLDNGALLCQLAQTLQEKFKENNSENKVAKRLLLKKIPCRANAPPGSFFARDNTANFLSWCREVGVDDTCLFESEGLVLHKQPREVCLCLLELGRIACRFGVEPSGLVKLEKEIEQEESHSTPPPSPSPTKSPGKKSAGKLLDDAVKHISEDPPCKCPQKFYVERLSQGRYRVGEKILFIRMLHNKHVMVRVGGGWETFEGYLLKHDPCRILQISRVDGKTSPVPNKSLPIKDPSPDSYLVVAAHYRSRRENASHNSGNWGTK
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3343219..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415877))
location: region:3343219-3415877:-1
so has part: feature:3415733-3415877:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3343219-3343467:-1:exon

XP_032894542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3415733-3415877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3397214-3397335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3380129-3380270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3373974-3374037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3360969-3361107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359851-3359958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3343219-3343467:-1:exon

gas2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gas2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 2
translation: MYSTFSSPKEPGPSLSDVHQYGQWLASRHEASLLPMKEDLALWLTNLLGKEITAESFMGKLDNGALLCQLAQTLQEKFKENNSENKVAKRLLLKKIPCRANAPPGSFFARDNTANFLSWCREVGVDDTCLFESEGLVLHKQPREVCLCLLELGRIACRFGVEPSGLVKLEKEIEQEESHSTPPPSPSPTKSPGKKSAGKLLDDAVKHISEDPPCKCPQKFYVERLSQGRYRVGEKILFIRMLHNKHVMVRVGGGWETFEGYLLKHDPCRILQISRVDGKTSPVPNKSLPIKDPSPDSYLVVAAHYRSRRENASHNSGNWGTK
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3343219..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415877))
location: region:3343219-3415877:-1
so has part: feature:3415733-3415877:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3343219-3343467:-1:exon

XP_032894543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3415733-3415877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3397214-3397335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3380129-3380270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3373974-3374037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3360969-3361107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359851-3359958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3343219-3343467:-1:exon

gas2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gas2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 2
translation: MYSTFSSPKEPGPSLSDVHQYGQWLASRHEASLLPMKEDLALWLTNLLGKEITAESFMGKLDNGALLCQLAQTLQEKFKENNSENKVAKRLLLKKIPCRANAPPGSFFARDNTANFLSWCREVGVDDTCLFESEGLVLHKQPREVCLCLLELGRIACRFGVEPSGLVKLEKEIEQEESHSTPPPSPSPTKSPGKKSAGKLLDDAVKHISEDPPCKCPQKFYVERLSQGRYRVGEKILFIRMLHNKHVMVRVGGGWETFEGYLLKHDPCRILQISRVDGKTSPVPNKSLPIKDPSPDSYLVVAAHYRSRRENASHNSGNWGTK
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3343219..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415877))
location: region:3343219-3415877:-1
so has part: feature:3415733-3415877:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3343219-3343467:-1:exon

XP_032894544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3415733-3415877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3397214-3397335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3380129-3380270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3373974-3374037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3360969-3361107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359851-3359958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3343219-3343467:-1:exon

gas2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gas2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 2
translation: MYSTFSSPKEPGPSLSDVHQYGQWLASRHEASLLPMKEDLALWLTNLLGKEITAESFMGKLDNGALLCQLAQTLQEKFKENNSENKVAKRLLLKKIPCRANAPPGSFFARDNTANFLSWCREVGVDDTCLFESEGLVLHKQPREVCLCLLELGRIACRFGVEPSGLVKLEKEIEQEESHSTPPPSPSPTKSPGKKSAGKLLDDAVKHISEDPPCKCPQKFYVERLSQGRYRVGEKILFIRMLHNKHVMVRVGGGWETFEGYLLKHDPCRILQISRVDGKTSPVPNKSLPIKDPSPDSYLVVAAHYRSRRENASHNSGNWGTK
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3343219..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415877))
location: region:3343219-3415877:-1
so has part: feature:3415733-3415877:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3343219-3343467:-1:exon

XP_032894545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3415733-3415877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3397214-3397335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3380129-3380270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3373974-3374037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3360969-3361107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359851-3359958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3343219-3343467:-1:exon

gas2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gas2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 2
translation: MYSTFSSPKEPGPSLSDVHQYGQWLASRHEASLLPMKEDLALWLTNLLGKEITAESFMGKLDNGALLCQLAQTLQEKFKENNSENKVAKRLLLKKIPCRANAPPGSFFARDNTANFLSWCREVGVDDTCLFESEGLVLHKQPREVCLCLLELGRIACRFGVEPSGLVKLEKEIEQEESHSTPPPSPSPTKSPGKKSAGKLLDDAVKHISEDPPCKCPQKFYVERLSQGRYRVGEKILFIRMLHNKHVMVRVGGGWETFEGYLLKHDPCRILQISRVDGKTSPVPNKSLPIKDPSPDSYLVVAAHYRSRRENASHNSGNWGTK
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3343219..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415877))
location: region:3343219-3415877:-1
so has part: feature:3415733-3415877:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3343219-3343467:-1:exon

XP_032894546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3415733-3415877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3397214-3397335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3380129-3380270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3373974-3374037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3360969-3361107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359851-3359958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3343219-3343467:-1:exon

gas2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gas2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 2
translation: MYSTFSSPKEPGPSLSDVHQYGQWLASRHEASLLPMKEDLALWLTNLLGKEITAESFMGKLDNGALLCQLAQTLQEKFKENNSENKVAKRLLLKKIPCRANAPPGSFFARDNTANFLSWCREVGVDDTCLFESEGLVLHKQPREVCLCLLELGRIACRFGVEPSGLVKLEKEIEQEESHSTPPPSPSPTKSPGKKSAGKLLDDAVKHISEDPPCKCPQKFYVERLSQGRYRVGEKILFIRMLHNKHVMVRVGGGWETFEGYLLKHDPCRILQISRVDGKTSPVPNKSLPIKDPSPDSYLVVAAHYRSRRENASHNSGNWGTK
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3343219..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415877))
location: region:3343219-3415877:-1
so has part: feature:3415733-3415877:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3343219-3343467:-1:exon

XP_032894547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3415733-3415877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3397214-3397335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3380129-3380270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3373974-3374037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3360969-3361107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359851-3359958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3343219-3343467:-1:exon

gas2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gas2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 2
translation: MYSTFSSPKEPGPSLSDVHQYGQWLASRHEASLLPMKEDLALWLTNLLGKEITAESFMGKLDNGALLCQLAQTLQEKFKENNSENKVAKRLLLKKIPCRANAPPGSFFARDNTANFLSWCREVGVDDTCLFESEGLVLHKQPREVCLCLLELGRIACRFGVEPSGLVKLEKEIEQEESHSTPPPSPSPTKSPGKKSAGKLLDDAVKHISEDPPCKCPQKFYVERLSQGRYRVGEKILFIRMLHNKHVMVRVGGGWETFEGYLLKHDPCRILQISRVDGKTSPVPNKSLPIKDPSPDSYLVVAAHYRSRRENASHNSGNWGTK
SIO_010081: gas2
subclass of: SO_0000673
so part of: gas2
location: complement(join(3343219..3343467,3359851..3359958,3360969..3361107,3373974..3374037,3380129..3380270,3397214..3397335,3415733..3415877))
location: region:3343219-3415877:-1
so has part: feature:3415733-3415877:-1:exon
so has part: feature:3397214-3397335:-1:exon
so has part: feature:3380129-3380270:-1:exon
so has part: feature:3373974-3374037:-1:exon
so has part: feature:3360969-3361107:-1:exon
so has part: feature:3359851-3359958:-1:exon
so has part: feature:3343219-3343467:-1:exon

XP_032894548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3415733-3415877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3397214-3397335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3380129-3380270:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3373974-3374037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3360969-3361107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3359851-3359958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3343219-3343467:-1:exon

fancf
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: fancf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3445873..3448649
location: region:3445873-3448649:1
so has part: feature:3445873-3448649:1:exon
subclass of: SO_0000010

116984511
type: Gene
SIO_000068: ncbigene

position:3445873:1
position: 3445873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3448649:1
position: 3448649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3445873-3448649:1:exon

fancf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fancf
product: FA complementation group F
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033038649.1
SIO_010081: fancf
subclass of: SO_0000673
so part of: fancf
location: 3445873..3448649
location: region:3445873-3448649:1
so has part: feature:3445873-3448649:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3445873-3448649:1:exon

fancf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fancf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group F protein
translation: MEETAVVEAAQRFAEVLAVARSPWAADWDTATVGRAFQWARYLEQLSHRLERQGQGEAWRRLQLQLRPESRAPMPHPLPGFRGLGLEELGRGRQMLGQALLCNPASSAAAFHRAAAWYRAGCGEEQAAAAAALRRAARLAAAARVLQLAGGNDTERAARVTQAEVWRERRGELPEEAVWRRAVSADAGCWRPLAALLTAADGDEPPAARPGLPGNSRARPGLLGDSAARPALPGDSRTLADAACRALPCPLLSELAALRPPFARRYTAHLQRWAARMQYDAGSGRWLHPDSPEQDWEKLLQHFTGLLQGPPATKESTLRTLNSLKAADGDFEVWGISVWTDLLLALKQQKVV
SIO_010081: fancf
subclass of: SO_0000673
so part of: fancf
location: 3445923..3446981
location: region:3445923-3446981:1
so has part: feature:3445923-3446981:1:exon

XP_032894540.1
type: Protein
SIO_000068: ncbiprotein

position:3445923:1
position: 3445923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3446981:1
position: 3446981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3445923-3446981:1:exon

slc17a6
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: slc17a6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3559134..3601268)
location: region:3559134-3601268:-1
so has part: feature:3559134-3601268:-1:exon
subclass of: SO_0000010

116984513
type: Gene
SIO_000068: ncbigene

position:3559134:-1
position: 3559134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3601268:-1
position: 3601268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3559134-3601268:-1:exon

slc17a6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: slc17a6
product: solute carrier family 17 member 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033038659.1
SIO_010081: slc17a6
subclass of: SO_0000673
so part of: slc17a6
location: complement(join(3559134..3559881,3560541..3560668,3562765..3562875,3565265..3565397,3567417..3567566,3568466..3568608,3570464..3570550,3571541..3571628,3573023..3573137,3596842..3596960,3597784..3598036,3600620..3601268))
location: region:3559134-3601268:-1
so has part: feature:3600620-3601268:-1:exon
so has part: feature:3597784-3598036:-1:exon
so has part: feature:3596842-3596960:-1:exon
so has part: feature:3573023-3573137:-1:exon
so has part: feature:3571541-3571628:-1:exon
so has part: feature:3570464-3570550:-1:exon
so has part: feature:3568466-3568608:-1:exon
so has part: feature:3567417-3567566:-1:exon
so has part: feature:3565265-3565397:-1:exon
so has part: feature:3562765-3562875:-1:exon
so has part: feature:3560541-3560668:-1:exon
so has part: feature:3559134-3559881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3600620-3601268:-1:exon

position:3600620:-1
position: 3600620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3597784-3598036:-1:exon

position:3597784:-1
position: 3597784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3598036:-1
position: 3598036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3596842-3596960:-1:exon

position:3596842:-1
position: 3596842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3596960:-1
position: 3596960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3573023-3573137:-1:exon

position:3573023:-1
position: 3573023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3573137:-1
position: 3573137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3571541-3571628:-1:exon

position:3571541:-1
position: 3571541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3571628:-1
position: 3571628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3570464-3570550:-1:exon

position:3570464:-1
position: 3570464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3570550:-1
position: 3570550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3568466-3568608:-1:exon

position:3568466:-1
position: 3568466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3568608:-1
position: 3568608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3567417-3567566:-1:exon

position:3567417:-1
position: 3567417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3567566:-1
position: 3567566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3565265-3565397:-1:exon

position:3565265:-1
position: 3565265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3565397:-1
position: 3565397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3562765-3562875:-1:exon

position:3562765:-1
position: 3562765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3562875:-1
position: 3562875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3560541-3560668:-1:exon

position:3560541:-1
position: 3560541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3560668:-1
position: 3560668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3559134-3559881:-1:exon

position:3559881:-1
position: 3559881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

slc17a6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: slc17a6
product: solute carrier family 17 member 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033038658.1
SIO_010081: slc17a6
subclass of: SO_0000673
so part of: slc17a6
location: complement(join(3559134..3559881,3560541..3560668,3562765..3562875,3565265..3565397,3567417..3567566,3568466..3568608,3570464..3570550,3571541..3571628,3573023..3573137,3596842..3596960,3597784..3598036,3600620..3600774,3600821..3601267))
location: region:3559134-3601267:-1
so has part: feature:3600821-3601267:-1:exon
so has part: feature:3600620-3600774:-1:exon
so has part: feature:3597784-3598036:-1:exon
so has part: feature:3596842-3596960:-1:exon
so has part: feature:3573023-3573137:-1:exon
so has part: feature:3571541-3571628:-1:exon
so has part: feature:3570464-3570550:-1:exon
so has part: feature:3568466-3568608:-1:exon
so has part: feature:3567417-3567566:-1:exon
so has part: feature:3565265-3565397:-1:exon
so has part: feature:3562765-3562875:-1:exon
so has part: feature:3560541-3560668:-1:exon
so has part: feature:3559134-3559881:-1:exon

position:3601267:-1
position: 3601267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3600821-3601267:-1:exon

position:3600821:-1
position: 3600821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3600620-3600774:-1:exon

position:3600774:-1
position: 3600774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3597784-3598036:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3596842-3596960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3573023-3573137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3571541-3571628:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3570464-3570550:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3568466-3568608:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3567417-3567566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3565265-3565397:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3562765-3562875:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3560541-3560668:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3559134-3559881:-1:exon

slc17a6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: slc17a6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicular glutamate transporter 2
translation: METVKERVFAPGKEGLKNFAGKSLSHLYRVLEKRQQPGENIELTEDGKVQNIAPKKPPLCDCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVAIVDMVNNSTIHHGNTIIKKKAKFNWDPETVGMIHGSFFWGYIVTQIPGGYIASRLAANRVFGAAIFLTSILNLLIPSAAKVHYGFVMFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILVQYTGWPSVFYVYGSFGMVWYIFWVLVSYESPAAHPTITEEERTYIEESIGESANLIGGIDKYKTPWKKFFTSLPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMLSALPHLVMTIIVPIGGQIADYLRAKRIMSTTMVRKIMNCGGFGLEATFLLVVGYSHSKAVAISFLVMAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTKNKSQQEWRYVFLIAALVHYAGVIFYALFASGEKQPWADPEQTSDEKCGFIHEDELAEETGDITQNYGTAKSYGATTCSNGVWPNGWEKKEEFVQEEAKDSYYCKDQEGDYS
SIO_010081: slc17a6
subclass of: SO_0000673
so part of: slc17a6
location: complement(join(3559552..3559881,3560541..3560668,3562765..3562875,3565265..3565397,3567417..3567566,3568466..3568608,3570464..3570550,3571541..3571628,3573023..3573137,3596842..3596960,3597784..3598036,3600620..3600705))
location: region:3559552-3600705:-1
so has part: feature:3600620-3600705:-1:exon
so has part: feature:3597784-3598036:-1:exon
so has part: feature:3596842-3596960:-1:exon
so has part: feature:3573023-3573137:-1:exon
so has part: feature:3571541-3571628:-1:exon
so has part: feature:3570464-3570550:-1:exon
so has part: feature:3568466-3568608:-1:exon
so has part: feature:3567417-3567566:-1:exon
so has part: feature:3565265-3565397:-1:exon
so has part: feature:3562765-3562875:-1:exon
so has part: feature:3560541-3560668:-1:exon
so has part: feature:3559552-3559881:-1:exon

XP_032894549.1
type: Protein
SIO_000068: ncbiprotein

position:3559552:-1
position: 3559552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3600705:-1
position: 3600705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3600620-3600705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3597784-3598036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3596842-3596960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3573023-3573137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3571541-3571628:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3570464-3570550:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3568466-3568608:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3567417-3567566:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3565265-3565397:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3562765-3562875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3560541-3560668:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3559552-3559881:-1:exon

slc17a6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: slc17a6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicular glutamate transporter 2
translation: METVKERVFAPGKEGLKNFAGKSLSHLYRVLEKRQQPGENIELTEDGKVQNIAPKKPPLCDCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVAIVDMVNNSTIHHGNTIIKKKAKFNWDPETVGMIHGSFFWGYIVTQIPGGYIASRLAANRVFGAAIFLTSILNLLIPSAAKVHYGFVMFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILVQYTGWPSVFYVYGSFGMVWYIFWVLVSYESPAAHPTITEEERTYIEESIGESANLIGGIDKYKTPWKKFFTSLPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMLSALPHLVMTIIVPIGGQIADYLRAKRIMSTTMVRKIMNCGGFGLEATFLLVVGYSHSKAVAISFLVMAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTKNKSQQEWRYVFLIAALVHYAGVIFYALFASGEKQPWADPEQTSDEKCGFIHEDELAEETGDITQNYGTAKSYGATTCSNGVWPNGWEKKEEFVQEEAKDSYYCKDQEGDYS
SIO_010081: slc17a6
subclass of: SO_0000673
so part of: slc17a6
location: complement(join(3559552..3559881,3560541..3560668,3562765..3562875,3565265..3565397,3567417..3567566,3568466..3568608,3570464..3570550,3571541..3571628,3573023..3573137,3596842..3596960,3597784..3598036,3600620..3600705))
location: region:3559552-3600705:-1
so has part: feature:3600620-3600705:-1:exon
so has part: feature:3597784-3598036:-1:exon
so has part: feature:3596842-3596960:-1:exon
so has part: feature:3573023-3573137:-1:exon
so has part: feature:3571541-3571628:-1:exon
so has part: feature:3570464-3570550:-1:exon
so has part: feature:3568466-3568608:-1:exon
so has part: feature:3567417-3567566:-1:exon
so has part: feature:3565265-3565397:-1:exon
so has part: feature:3562765-3562875:-1:exon
so has part: feature:3560541-3560668:-1:exon
so has part: feature:3559552-3559881:-1:exon

XP_032894550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3600620-3600705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3597784-3598036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3596842-3596960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3573023-3573137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3571541-3571628:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3570464-3570550:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3568466-3568608:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3567417-3567566:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3565265-3565397:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3562765-3562875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3560541-3560668:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3559552-3559881:-1:exon

LOC116984515
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3607467..3627318)
location: region:3607467-3627318:-1
so has part: feature:3607467-3627318:-1:exon
subclass of: SO_0000010

116984515
type: Gene
SIO_000068: ncbigene

position:3607467:-1
position: 3607467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3627318:-1
position: 3627318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3607467-3627318:-1:exon

LOC116984515
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984515
product: transmembrane 7 superfamily member 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033038660.1
SIO_010081: LOC116984515
subclass of: SO_0000673
so part of: LOC116984515
location: complement(join(3607467..3608153,3609047..3609209,3610803..3610900,3611514..3611666,3613276..3613356,3614707..3614799,3616042..3616219,3617788..3617959,3619744..3619864,3620863..3621010,3625285..3625439,3627183..3627318))
location: region:3607467-3627318:-1
so has part: feature:3627183-3627318:-1:exon
so has part: feature:3625285-3625439:-1:exon
so has part: feature:3620863-3621010:-1:exon
so has part: feature:3619744-3619864:-1:exon
so has part: feature:3617788-3617959:-1:exon
so has part: feature:3616042-3616219:-1:exon
so has part: feature:3614707-3614799:-1:exon
so has part: feature:3613276-3613356:-1:exon
so has part: feature:3611514-3611666:-1:exon
so has part: feature:3610803-3610900:-1:exon
so has part: feature:3609047-3609209:-1:exon
so has part: feature:3607467-3608153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3627183-3627318:-1:exon

position:3627183:-1
position: 3627183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3625285-3625439:-1:exon

position:3625285:-1
position: 3625285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3625439:-1
position: 3625439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3620863-3621010:-1:exon

position:3620863:-1
position: 3620863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3621010:-1
position: 3621010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3619744-3619864:-1:exon

position:3619744:-1
position: 3619744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3619864:-1
position: 3619864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3617788-3617959:-1:exon

position:3617788:-1
position: 3617788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3617959:-1
position: 3617959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3616042-3616219:-1:exon

position:3616042:-1
position: 3616042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3616219:-1
position: 3616219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3614707-3614799:-1:exon

position:3614707:-1
position: 3614707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3614799:-1
position: 3614799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3613276-3613356:-1:exon

position:3613276:-1
position: 3613276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3613356:-1
position: 3613356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3611514-3611666:-1:exon

position:3611514:-1
position: 3611514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3611666:-1
position: 3611666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3610803-3610900:-1:exon

position:3610803:-1
position: 3610803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3610900:-1
position: 3610900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3609047-3609209:-1:exon

position:3609047:-1
position: 3609047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3609209:-1
position: 3609209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3607467-3608153:-1:exon

position:3608153:-1
position: 3608153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116984515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 7 superfamily member 3-like
translation: MGTGRSLLWALFLIAALLTSTRCLILQQPPATGHIKVPLLQHVSVYLEPNEHKRVVITNISRLAASVVAQVYSHVLNVTVSLSRYFSVDSSYTSSSAGVVLILNPDAAKATFYVKAGEEEVLATLFALPYAAQDPVPGACNLEFNLDNDPNLHLTYNVYETAVSFAPANLGTDRGTFPPACDVGTDGHTRWRLTYELYQYFLPENDLSDKSLSDGMSKMSSVQSIMANGMKITTIQSSQKTRLYGNSYVGIGVIYNVIVRDPLLKTSAAYAPVSTYTCDLSTNGYECKQSDGNFIYIQVLCTVIGIYGLLLCLAGHRLFEAEFLFFGFLIFGFMSFVLVTRYSALDFIRRFAILVGGGLFGGLLLSLVRWRFDVPLICVAIVGLVLGFLVAAIIFFTPLANFSLFHNDLNFWMVYAFITLVIPTVLLPFAKTLNIITCALVGSYAVIVAVGMYVYSSLTYIILNVIKRAVDPDFAMVYSNAPFQRTEYILTFVWVFLVINGTVLQFVLARNRSTFPPSLYQKWRRRRNAAIGERTPLLQPPEI
SIO_010081: LOC116984515
subclass of: SO_0000673
so part of: LOC116984515
location: complement(join(3607981..3608153,3609047..3609209,3610803..3610900,3611514..3611666,3613276..3613356,3614707..3614799,3616042..3616219,3617788..3617959,3619744..3619864,3620863..3621010,3625285..3625439,3627183..3627279))
location: region:3607981-3627279:-1
so has part: feature:3627183-3627279:-1:exon
so has part: feature:3625285-3625439:-1:exon
so has part: feature:3620863-3621010:-1:exon
so has part: feature:3619744-3619864:-1:exon
so has part: feature:3617788-3617959:-1:exon
so has part: feature:3616042-3616219:-1:exon
so has part: feature:3614707-3614799:-1:exon
so has part: feature:3613276-3613356:-1:exon
so has part: feature:3611514-3611666:-1:exon
so has part: feature:3610803-3610900:-1:exon
so has part: feature:3609047-3609209:-1:exon
so has part: feature:3607981-3608153:-1:exon

XP_032894551.1
type: Protein
SIO_000068: ncbiprotein

position:3607981:-1
position: 3607981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3627279:-1
position: 3627279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3627183-3627279:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3625285-3625439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3620863-3621010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3619744-3619864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3617788-3617959:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3616042-3616219:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3614707-3614799:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3613276-3613356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3611514-3611666:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3610803-3610900:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3609047-3609209:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3607981-3608153:-1:exon

LOC116984379
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984379
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3636084..3642786)
location: region:3636084-3642786:-1
so has part: feature:3636084-3642786:-1:exon
subclass of: SO_0000010

116984379
type: Gene
SIO_000068: ncbigene

position:3636084:-1
position: 3636084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3642786:-1
position: 3642786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3636084-3642786:-1:exon

LOC116984379
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984379
product: P2Y purinoceptor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_033038537.1
SIO_010081: LOC116984379
subclass of: SO_0000673
so part of: LOC116984379
location: complement(join(3636084..3637010,3642766..3642786))
location: region:3636084-3642786:-1
so has part: feature:3642766-3642786:-1:exon
so has part: feature:3636084-3637010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3642766-3642786:-1:exon

position:3642766:-1
position: 3642766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3636084-3637010:-1:exon

position:3637010:-1
position: 3637010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116984379
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984379
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 1-like
translation: MTVANAEVYLIPVAFLLVLVIGLSLNCLVLWLTFHHTRHWNRSTLFLCNLTLADTTWILTLPFLIHYHFVGLQWIFGSLVCRAVRCLYHACFYSSIYFVTCISLDRYLAIVHPARSLLLLNKRHSLYICSAIWVLATAFSIPTALMTFAIPCSSNQTVCTLYIFSYDPDQALPYSVIGTVTGFILPFTAICFCYWSCTKELKRHHLQCEQKKKKLFRLMYSVLIIFGLMYLPYHLARNACIMVRVLWTHQTWLAHNSDTGFLIEMAICSFNTCLNPFFYFVTNINAKNSLRKTLSSCCGATRQAVRLKVAAIHPV
SIO_010081: LOC116984379
subclass of: SO_0000673
so part of: LOC116984379
location: complement(join(3636084..3637010,3642766..3642786))
location: region:3636084-3642786:-1
so has part: feature:3642766-3642786:-1:exon
so has part: feature:3636084-3637010:-1:exon

XP_032894428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3642766-3642786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3636084-3637010:-1:exon

ano5
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ano5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3661163..3775206)
location: region:3661163-3775206:-1
so has part: feature:3661163-3775206:-1:exon
subclass of: SO_0000010

116984516
type: Gene
SIO_000068: ncbigene

position:3661163:-1
position: 3661163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3775206:-1
position: 3775206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3661163-3775206:-1:exon

ano5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ano5
product: anoctamin 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033038663.1
SIO_010081: ano5
subclass of: SO_0000673
so part of: ano5
location: complement(join(3661163..3661909,3663404..3663509,3664605..3664777,3666002..3666207,3669881..3670011,3670400..3670497,3676194..3676363,3677732..3677954,3679930..3680004,3684079..3684230,3686127..3686187,3689054..3689156,3690244..3690378,3693187..3693302,3699332..3699445,3700893..3701177,3702631..3702699,3709672..3709782,3720721..3720762,3739390..3739460,3743754..3743792,3775004..3775206))
location: region:3661163-3775206:-1
so has part: feature:3775004-3775206:-1:exon
so has part: feature:3743754-3743792:-1:exon
so has part: feature:3739390-3739460:-1:exon
so has part: feature:3720721-3720762:-1:exon
so has part: feature:3709672-3709782:-1:exon
so has part: feature:3702631-3702699:-1:exon
so has part: feature:3700893-3701177:-1:exon
so has part: feature:3699332-3699445:-1:exon
so has part: feature:3693187-3693302:-1:exon
so has part: feature:3690244-3690378:-1:exon
so has part: feature:3689054-3689156:-1:exon
so has part: feature:3686127-3686187:-1:exon
so has part: feature:3684079-3684230:-1:exon
so has part: feature:3679930-3680004:-1:exon
so has part: feature:3677732-3677954:-1:exon
so has part: feature:3676194-3676363:-1:exon
so has part: feature:3670400-3670497:-1:exon
so has part: feature:3669881-3670011:-1:exon
so has part: feature:3666002-3666207:-1:exon
so has part: feature:3664605-3664777:-1:exon
so has part: feature:3663404-3663509:-1:exon
so has part: feature:3661163-3661909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3775004-3775206:-1:exon

position:3775004:-1
position: 3775004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3743754-3743792:-1:exon

position:3743754:-1
position: 3743754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3743792:-1
position: 3743792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3739390-3739460:-1:exon

position:3739390:-1
position: 3739390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3739460:-1
position: 3739460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3720721-3720762:-1:exon

position:3720721:-1
position: 3720721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3720762:-1
position: 3720762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3709672-3709782:-1:exon

position:3709672:-1
position: 3709672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3709782:-1
position: 3709782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3702631-3702699:-1:exon

position:3702631:-1
position: 3702631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3702699:-1
position: 3702699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3700893-3701177:-1:exon

position:3700893:-1
position: 3700893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3701177:-1
position: 3701177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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ano5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ano5
product: anoctamin 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033038661.1
SIO_010081: ano5
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ano5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ano5
product: anoctamin 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033038665.1
SIO_010081: ano5
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ano5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ano5
product: anoctamin 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033038664.1
SIO_010081: ano5
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ano5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ano5
product: anoctamin 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033038666.1
SIO_010081: ano5
subclass of: SO_0000673
so part of: ano5
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ano5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ano5
product: anoctamin 5, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033038667.1
SIO_010081: ano5
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ano5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ano5
product: anoctamin 5, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
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ano5
type: Messenger RNA
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product: anoctamin 5, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
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ano5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ano5
product: anoctamin 5, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
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ano5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ano5
product: anoctamin 5, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
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RO_0002162: 386614
gene: ano5
product: anoctamin 5, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
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SIO_000628: feature:3684079-3684230:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3679930-3680004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3677732-3677954:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3676194-3676363:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3670400-3670497:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3669881-3670011:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3666002-3666207:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3664605-3664777:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3663404-3663509:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3661163-3661909:-1:exon

ano5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ano5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-5 isoform X6
translation: MISYNNKRDETLIEMSSSAGEETGGEDNGPYYDPSNGTREPGTPSNSEIDKQIHSKDSVFFCDGIRRIDFILSYVDDPKDADKKMERRKEFEDNLLKTGLELETENKDDSEDGKTYFVKVHAPWDVLAMYAEVMHIKVPIKENDIPQARENPFDRLLKPFRLDPAIINPEPDYFTAPFSKQRQELYLINNPETFFSPSTRNRIVYYILSRCKYTTEDGKRKLGIKRLLNNGTYTAAYPLHDCRYWKKSHDSKSDNERYILYKRWARFGQFYKEQPLNLIRKYYGEKIGIYFAWLGFYTEMLGIAGGVGFLCFLYGCITKDGNVWSDEICDAEIGGKIIMCPLCDGCDFWRLNITCQSTKNSHLFDNAATLFFAVFMGIWVTLFLELWKRRQAKLEYEWDLVDFEEEQQQLQIRPEYEANCSHHKKNPVTQELEPYIPISNQAFRFVLSGATVLFWIFLILICIIAVIVYRLSMYASFAKITGSMKNVKYIGTLFTPQMVTSVTASILNFIIIMILNYFYERVAIWITDLEIPKTHLEYENRLTMKMFLFQFVNYYSSCFYVAFFKGKFLGYPGKYNILFGSWRSEECDPGGCLIELTTQLTIIMAGKQIWGNIQESLLPWVKNWWVSRKARHHPERLYSRWEQDHDLQDMGQFGLFYEYLEMVIQFGFVTLFVASFPLAPVLALLNNIIEIRVDAWKFITQFRRPMAAKAHSIGIWQQILNSVAIVSVVINAFIVAFTSDMIPRLVYKYAYSVNDELPMKGYINNSLSIANTSVFDGNSLYNGNITSCRYKDYRYPSGHSFEYRHTMQYWHILAAKMAFIIIMEHVVFLVKFSIAALIPDVPSEVKARIKREKYLTQKILHEYELNKLREILAGKENVVVNKEMSAHAEKVELLSEEL
SIO_010081: ano5
subclass of: SO_0000673
so part of: ano5
location: complement(join(3661685..3661909,3663404..3663509,3664605..3664777,3666002..3666207,3669881..3670011,3670400..3670497,3676194..3676363,3677732..3677954,3679930..3680004,3684079..3684230,3686127..3686187,3689054..3689156,3690244..3690378,3693187..3693302,3699332..3699445,3700893..3701177,3702631..3702699,3709672..3709782,3739390..3739460,3775004..3775076))
location: region:3661685-3775076:-1
so has part: feature:3775004-3775076:-1:exon
so has part: feature:3739390-3739460:-1:exon
so has part: feature:3709672-3709782:-1:exon
so has part: feature:3702631-3702699:-1:exon
so has part: feature:3700893-3701177:-1:exon
so has part: feature:3699332-3699445:-1:exon
so has part: feature:3693187-3693302:-1:exon
so has part: feature:3690244-3690378:-1:exon
so has part: feature:3689054-3689156:-1:exon
so has part: feature:3686127-3686187:-1:exon
so has part: feature:3684079-3684230:-1:exon
so has part: feature:3679930-3680004:-1:exon
so has part: feature:3677732-3677954:-1:exon
so has part: feature:3676194-3676363:-1:exon
so has part: feature:3670400-3670497:-1:exon
so has part: feature:3669881-3670011:-1:exon
so has part: feature:3666002-3666207:-1:exon
so has part: feature:3664605-3664777:-1:exon
so has part: feature:3663404-3663509:-1:exon
so has part: feature:3661685-3661909:-1:exon

XP_032894558.1
type: Protein
SIO_000068: ncbiprotein

position:3661685:-1
position: 3661685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3775076:-1
position: 3775076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3775004-3775076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3739390-3739460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3709672-3709782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3702631-3702699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3700893-3701177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3699332-3699445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3693187-3693302:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3690244-3690378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3689054-3689156:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3686127-3686187:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3684079-3684230:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3679930-3680004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3677732-3677954:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3676194-3676363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3670400-3670497:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3669881-3670011:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3666002-3666207:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3664605-3664777:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3663404-3663509:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3661685-3661909:-1:exon

ano5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ano5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-5 isoform X4
translation: MISYNNKRDETLIEMSSSAGEETGGEDNGPYYDPSNGTREPGTPSNSEMQRKRLLFVNKRFRIDKQIHSKDSVFFCDGIRRIDFILSYVDDPKDADKKMERRKEFEDNLLKTGLELETENKDDSEDGKTYFVKVHAPWDVLAMYAEVMHIKVPIKENDIPQARENPFDRLLKPFRLDPAIINPEPDYFTAPFSKQRQELYLINNPETFFSPSTRNRIVYYILSRCKYTTEDGKRKLGIKRLLNNGTYTAAYPLHDCRYWKKSHDSKSDNERYILYKRWARFGQFYKEQPLNLIRKYYGEKIGIYFAWLGFYTEMLGIAGGVGFLCFLYGCITKDGNVWSDEICDAEIGGKIIMCPLCDGCDFWRLNITCQSTKNSHLFDNAATLFFAVFMGIWVTLFLELWKRRQAKLEYEWDLVDFEEEQQQLQIRPEYEANCSHHKKNPVTQELEPYIPISNQAFRFVLSGATVLFWIFLILICIIAVIVYRLSMYASFAKITGSMKNVKYIGTLFTPQMVTSVTASILNFIIIMILNYFYERVAIWITDLEIPKTHLEYENRLTMKMFLFQFVNYYSSCFYVAFFKGKFLGYPGKYNILFGSWRSEECDPGGCLIELTTQLTIIMAGKQIWGNIQESLLPWVKNWWVSRKARHHPERLYSRWEQDHDLQDMGQFGLFYEYLEMVIQFGFVTLFVASFPLAPVLALLNNIIEIRVDAWKFITQFRRPMAAKAHSIGIWQQILNSVAIVSVVINAFIVAFTSDMIPRLVYKYAYSVNDELPMKGYINNSLSIANTSVFDGNSLYNGNITSCRYKDYRYPSGHSFEYRHTMQYWHILAAKMAFIIIMEHVVFLVKFSIAALIPDVPSEVKARIKREKYLTQKILHEYELNKLREILAGKENVVVNKEMSAHAEKVELLSEEL
SIO_010081: ano5
subclass of: SO_0000673
so part of: ano5
location: complement(join(3661685..3661909,3663404..3663509,3664605..3664777,3666002..3666207,3669881..3670011,3670400..3670497,3676194..3676363,3677732..3677954,3679930..3680004,3684079..3684230,3686127..3686187,3689054..3689156,3690244..3690378,3693187..3693302,3699332..3699445,3700893..3701177,3702631..3702699,3709672..3709782,3720721..3720762,3739390..3739460,3775004..3775076))
location: region:3661685-3775076:-1
so has part: feature:3775004-3775076:-1:exon
so has part: feature:3739390-3739460:-1:exon
so has part: feature:3720721-3720762:-1:exon
so has part: feature:3709672-3709782:-1:exon
so has part: feature:3702631-3702699:-1:exon
so has part: feature:3700893-3701177:-1:exon
so has part: feature:3699332-3699445:-1:exon
so has part: feature:3693187-3693302:-1:exon
so has part: feature:3690244-3690378:-1:exon
so has part: feature:3689054-3689156:-1:exon
so has part: feature:3686127-3686187:-1:exon
so has part: feature:3684079-3684230:-1:exon
so has part: feature:3679930-3680004:-1:exon
so has part: feature:3677732-3677954:-1:exon
so has part: feature:3676194-3676363:-1:exon
so has part: feature:3670400-3670497:-1:exon
so has part: feature:3669881-3670011:-1:exon
so has part: feature:3666002-3666207:-1:exon
so has part: feature:3664605-3664777:-1:exon
so has part: feature:3663404-3663509:-1:exon
so has part: feature:3661685-3661909:-1:exon

XP_032894556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3775004-3775076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3739390-3739460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3720721-3720762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3709672-3709782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3702631-3702699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3700893-3701177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3699332-3699445:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3693187-3693302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3690244-3690378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3689054-3689156:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3686127-3686187:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3684079-3684230:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3679930-3680004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3677732-3677954:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3676194-3676363:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3670400-3670497:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3669881-3670011:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3666002-3666207:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3664605-3664777:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3663404-3663509:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3661685-3661909:-1:exon

ano5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ano5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-5 isoform X3
translation: MISYNNKRDETLIEMSSSAGEETGGEDNGPYYDPSNGTREPGTPSNSEVLSTTTETASLISGPSKMIDKQIHSKDSVFFCDGIRRIDFILSYVDDPKDADKKMERRKEFEDNLLKTGLELETENKDDSEDGKTYFVKVHAPWDVLAMYAEVMHIKVPIKENDIPQARENPFDRLLKPFRLDPAIINPEPDYFTAPFSKQRQELYLINNPETFFSPSTRNRIVYYILSRCKYTTEDGKRKLGIKRLLNNGTYTAAYPLHDCRYWKKSHDSKSDNERYILYKRWARFGQFYKEQPLNLIRKYYGEKIGIYFAWLGFYTEMLGIAGGVGFLCFLYGCITKDGNVWSDEICDAEIGGKIIMCPLCDGCDFWRLNITCQSTKNSHLFDNAATLFFAVFMGIWVTLFLELWKRRQAKLEYEWDLVDFEEEQQQLQIRPEYEANCSHHKKNPVTQELEPYIPISNQAFRFVLSGATVLFWIFLILICIIAVIVYRLSMYASFAKITGSMKNVKYIGTLFTPQMVTSVTASILNFIIIMILNYFYERVAIWITDLEIPKTHLEYENRLTMKMFLFQFVNYYSSCFYVAFFKGKFLGYPGKYNILFGSWRSEECDPGGCLIELTTQLTIIMAGKQIWGNIQESLLPWVKNWWVSRKARHHPERLYSRWEQDHDLQDMGQFGLFYEYLEMVIQFGFVTLFVASFPLAPVLALLNNIIEIRVDAWKFITQFRRPMAAKAHSIGIWQQILNSVAIVSVVINAFIVAFTSDMIPRLVYKYAYSVNDELPMKGYINNSLSIANTSVFDGNSLYNGNITSCRYKDYRYPSGHSFEYRHTMQYWHILAAKMAFIIIMEHVVFLVKFSIAALIPDVPSEVKARIKREKYLTQKILHEYELNKLREILAGKENVVVNKEMSAHAEKVELLSEEL
SIO_010081: ano5
subclass of: SO_0000673
so part of: ano5
location: complement(join(3661685..3661909,3663404..3663509,3664605..3664777,3666002..3666207,3669881..3670011,3670400..3670497,3676194..3676363,3677732..3677954,3679930..3680004,3684079..3684230,3686127..3686187,3689054..3689156,3690244..3690378,3693187..3693302,3699332..3699445,3700893..3701177,3702631..3702699,3709672..3709782,3726994..3727047,3739390..3739460,3775004..3775076))
location: region:3661685-3775076:-1
so has part: feature:3775004-3775076:-1:exon
so has part: feature:3739390-3739460:-1:exon
so has part: feature:3726994-3727047:-1:exon
so has part: feature:3709672-3709782:-1:exon
so has part: feature:3702631-3702699:-1:exon
so has part: feature:3700893-3701177:-1:exon
so has part: feature:3699332-3699445:-1:exon
so has part: feature:3693187-3693302:-1:exon
so has part: feature:3690244-3690378:-1:exon
so has part: feature:3689054-3689156:-1:exon
so has part: feature:3686127-3686187:-1:exon
so has part: feature:3684079-3684230:-1:exon
so has part: feature:3679930-3680004:-1:exon
so has part: feature:3677732-3677954:-1:exon
so has part: feature:3676194-3676363:-1:exon
so has part: feature:3670400-3670497:-1:exon
so has part: feature:3669881-3670011:-1:exon
so has part: feature:3666002-3666207:-1:exon
so has part: feature:3664605-3664777:-1:exon
so has part: feature:3663404-3663509:-1:exon
so has part: feature:3661685-3661909:-1:exon

XP_032894555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3775004-3775076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3739390-3739460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3726994-3727047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3709672-3709782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3702631-3702699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3700893-3701177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3699332-3699445:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3693187-3693302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3690244-3690378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3689054-3689156:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3686127-3686187:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3684079-3684230:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3679930-3680004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3677732-3677954:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3676194-3676363:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3670400-3670497:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3669881-3670011:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3666002-3666207:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3664605-3664777:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3663404-3663509:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3661685-3661909:-1:exon

ano5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ano5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-5 isoform X5
translation: MISYNNKRDETLIEMSSSAGEETGDIGLISGFPSDSPGEDNGPYYDPSNGTREPGTPSNSEIDKQIHSKDSVFFCDGIRRIDFILSYVDDPKDADKKMERRKEFEDNLLKTGLELETENKDDSEDGKTYFVKVHAPWDVLAMYAEVMHIKVPIKENDIPQARENPFDRLLKPFRLDPAIINPEPDYFTAPFSKQRQELYLINNPETFFSPSTRNRIVYYILSRCKYTTEDGKRKLGIKRLLNNGTYTAAYPLHDCRYWKKSHDSKSDNERYILYKRWARFGQFYKEQPLNLIRKYYGEKIGIYFAWLGFYTEMLGIAGGVGFLCFLYGCITKDGNVWSDEICDAEIGGKIIMCPLCDGCDFWRLNITCQSTKNSHLFDNAATLFFAVFMGIWVTLFLELWKRRQAKLEYEWDLVDFEEEQQQLQIRPEYEANCSHHKKNPVTQELEPYIPISNQAFRFVLSGATVLFWIFLILICIIAVIVYRLSMYASFAKITGSMKNVKYIGTLFTPQMVTSVTASILNFIIIMILNYFYERVAIWITDLEIPKTHLEYENRLTMKMFLFQFVNYYSSCFYVAFFKGKFLGYPGKYNILFGSWRSEECDPGGCLIELTTQLTIIMAGKQIWGNIQESLLPWVKNWWVSRKARHHPERLYSRWEQDHDLQDMGQFGLFYEYLEMVIQFGFVTLFVASFPLAPVLALLNNIIEIRVDAWKFITQFRRPMAAKAHSIGIWQQILNSVAIVSVVINAFIVAFTSDMIPRLVYKYAYSVNDELPMKGYINNSLSIANTSVFDGNSLYNGNITSCRYKDYRYPSGHSFEYRHTMQYWHILAAKMAFIIIMEHVVFLVKFSIAALIPDVPSEVKARIKREKYLTQKILHEYELNKLREILAGKENVVVNKEMSAHAEKVELLSEEL
SIO_010081: ano5
subclass of: SO_0000673
so part of: ano5
location: complement(join(3661685..3661909,3663404..3663509,3664605..3664777,3666002..3666207,3669881..3670011,3670400..3670497,3676194..3676363,3677732..3677954,3679930..3680004,3684079..3684230,3686127..3686187,3689054..3689156,3690244..3690378,3693187..3693302,3699332..3699445,3700893..3701177,3702631..3702699,3709672..3709782,3739390..3739460,3743754..3743792,3775004..3775076))
location: region:3661685-3775076:-1
so has part: feature:3775004-3775076:-1:exon
so has part: feature:3743754-3743792:-1:exon
so has part: feature:3739390-3739460:-1:exon
so has part: feature:3709672-3709782:-1:exon
so has part: feature:3702631-3702699:-1:exon
so has part: feature:3700893-3701177:-1:exon
so has part: feature:3699332-3699445:-1:exon
so has part: feature:3693187-3693302:-1:exon
so has part: feature:3690244-3690378:-1:exon
so has part: feature:3689054-3689156:-1:exon
so has part: feature:3686127-3686187:-1:exon
so has part: feature:3684079-3684230:-1:exon
so has part: feature:3679930-3680004:-1:exon
so has part: feature:3677732-3677954:-1:exon
so has part: feature:3676194-3676363:-1:exon
so has part: feature:3670400-3670497:-1:exon
so has part: feature:3669881-3670011:-1:exon
so has part: feature:3666002-3666207:-1:exon
so has part: feature:3664605-3664777:-1:exon
so has part: feature:3663404-3663509:-1:exon
so has part: feature:3661685-3661909:-1:exon

XP_032894557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3775004-3775076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3743754-3743792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3739390-3739460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3709672-3709782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3702631-3702699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3700893-3701177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3699332-3699445:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3693187-3693302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3690244-3690378:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3689054-3689156:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3686127-3686187:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3684079-3684230:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3679930-3680004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3677732-3677954:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3676194-3676363:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3670400-3670497:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3669881-3670011:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3666002-3666207:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3664605-3664777:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3663404-3663509:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3661685-3661909:-1:exon

ano5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ano5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-5 isoform X2
translation: MISYNNKRDETLIEMSSSAGEETGDIGLISGFPSDSPGEDNGPYYDPSNGTREPGTPSNSEMQRKRLLFVNKRFRIDKQIHSKDSVFFCDGIRRIDFILSYVDDPKDADKKMERRKEFEDNLLKTGLELETENKDDSEDGKTYFVKVHAPWDVLAMYAEVMHIKVPIKENDIPQARENPFDRLLKPFRLDPAIINPEPDYFTAPFSKQRQELYLINNPETFFSPSTRNRIVYYILSRCKYTTEDGKRKLGIKRLLNNGTYTAAYPLHDCRYWKKSHDSKSDNERYILYKRWARFGQFYKEQPLNLIRKYYGEKIGIYFAWLGFYTEMLGIAGGVGFLCFLYGCITKDGNVWSDEICDAEIGGKIIMCPLCDGCDFWRLNITCQSTKNSHLFDNAATLFFAVFMGIWVTLFLELWKRRQAKLEYEWDLVDFEEEQQQLQIRPEYEANCSHHKKNPVTQELEPYIPISNQAFRFVLSGATVLFWIFLILICIIAVIVYRLSMYASFAKITGSMKNVKYIGTLFTPQMVTSVTASILNFIIIMILNYFYERVAIWITDLEIPKTHLEYENRLTMKMFLFQFVNYYSSCFYVAFFKGKFLGYPGKYNILFGSWRSEECDPGGCLIELTTQLTIIMAGKQIWGNIQESLLPWVKNWWVSRKARHHPERLYSRWEQDHDLQDMGQFGLFYEYLEMVIQFGFVTLFVASFPLAPVLALLNNIIEIRVDAWKFITQFRRPMAAKAHSIGIWQQILNSVAIVSVVINAFIVAFTSDMIPRLVYKYAYSVNDELPMKGYINNSLSIANTSVFDGNSLYNGNITSCRYKDYRYPSGHSFEYRHTMQYWHILAAKMAFIIIMEHVVFLVKFSIAALIPDVPSEVKARIKREKYLTQKILHEYELNKLREILAGKENVVVNKEMSAHAEKVELLSEEL
SIO_010081: ano5
subclass of: SO_0000673
so part of: ano5
location: complement(join(3661685..3661909,3663404..3663509,3664605..3664777,3666002..3666207,3669881..3670011,3670400..3670497,3676194..3676363,3677732..3677954,3679930..3680004,3684079..3684230,3686127..3686187,3689054..3689156,3690244..3690378,3693187..3693302,3699332..3699445,3700893..3701177,3702631..3702699,3709672..3709782,3720721..3720762,3739390..3739460,3743754..3743792,3775004..3775076))
location: region:3661685-3775076:-1
so has part: feature:3775004-3775076:-1:exon
so has part: feature:3743754-3743792:-1:exon
so has part: feature:3739390-3739460:-1:exon
so has part: feature:3720721-3720762:-1:exon
so has part: feature:3709672-3709782:-1:exon
so has part: feature:3702631-3702699:-1:exon
so has part: feature:3700893-3701177:-1:exon
so has part: feature:3699332-3699445:-1:exon
so has part: feature:3693187-3693302:-1:exon
so has part: feature:3690244-3690378:-1:exon
so has part: feature:3689054-3689156:-1:exon
so has part: feature:3686127-3686187:-1:exon
so has part: feature:3684079-3684230:-1:exon
so has part: feature:3679930-3680004:-1:exon
so has part: feature:3677732-3677954:-1:exon
so has part: feature:3676194-3676363:-1:exon
so has part: feature:3670400-3670497:-1:exon
so has part: feature:3669881-3670011:-1:exon
so has part: feature:3666002-3666207:-1:exon
so has part: feature:3664605-3664777:-1:exon
so has part: feature:3663404-3663509:-1:exon
so has part: feature:3661685-3661909:-1:exon

XP_032894554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3775004-3775076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3743754-3743792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3739390-3739460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3720721-3720762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3709672-3709782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3702631-3702699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3700893-3701177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3699332-3699445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3693187-3693302:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3690244-3690378:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3689054-3689156:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3686127-3686187:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3684079-3684230:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3679930-3680004:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3677732-3677954:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3676194-3676363:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3670400-3670497:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3669881-3670011:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3666002-3666207:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3664605-3664777:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3663404-3663509:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3661685-3661909:-1:exon

ano5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ano5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-5 isoform X1
translation: MISYNNKRDETLIEMSSSAGEETGDIGLISGFPSDSPGEDNGPYYDPSNGTREPGTPSNSEVLSTTTETASLISGPSKMIDKQIHSKDSVFFCDGIRRIDFILSYVDDPKDADKKMERRKEFEDNLLKTGLELETENKDDSEDGKTYFVKVHAPWDVLAMYAEVMHIKVPIKENDIPQARENPFDRLLKPFRLDPAIINPEPDYFTAPFSKQRQELYLINNPETFFSPSTRNRIVYYILSRCKYTTEDGKRKLGIKRLLNNGTYTAAYPLHDCRYWKKSHDSKSDNERYILYKRWARFGQFYKEQPLNLIRKYYGEKIGIYFAWLGFYTEMLGIAGGVGFLCFLYGCITKDGNVWSDEICDAEIGGKIIMCPLCDGCDFWRLNITCQSTKNSHLFDNAATLFFAVFMGIWVTLFLELWKRRQAKLEYEWDLVDFEEEQQQLQIRPEYEANCSHHKKNPVTQELEPYIPISNQAFRFVLSGATVLFWIFLILICIIAVIVYRLSMYASFAKITGSMKNVKYIGTLFTPQMVTSVTASILNFIIIMILNYFYERVAIWITDLEIPKTHLEYENRLTMKMFLFQFVNYYSSCFYVAFFKGKFLGYPGKYNILFGSWRSEECDPGGCLIELTTQLTIIMAGKQIWGNIQESLLPWVKNWWVSRKARHHPERLYSRWEQDHDLQDMGQFGLFYEYLEMVIQFGFVTLFVASFPLAPVLALLNNIIEIRVDAWKFITQFRRPMAAKAHSIGIWQQILNSVAIVSVVINAFIVAFTSDMIPRLVYKYAYSVNDELPMKGYINNSLSIANTSVFDGNSLYNGNITSCRYKDYRYPSGHSFEYRHTMQYWHILAAKMAFIIIMEHVVFLVKFSIAALIPDVPSEVKARIKREKYLTQKILHEYELNKLREILAGKENVVVNKEMSAHAEKVELLSEEL
SIO_010081: ano5
subclass of: SO_0000673
so part of: ano5
location: complement(join(3661685..3661909,3663404..3663509,3664605..3664777,3666002..3666207,3669881..3670011,3670400..3670497,3676194..3676363,3677732..3677954,3679930..3680004,3684079..3684230,3686127..3686187,3689054..3689156,3690244..3690378,3693187..3693302,3699332..3699445,3700893..3701177,3702631..3702699,3709672..3709782,3726994..3727047,3739390..3739460,3743754..3743792,3775004..3775076))
location: region:3661685-3775076:-1
so has part: feature:3775004-3775076:-1:exon
so has part: feature:3743754-3743792:-1:exon
so has part: feature:3739390-3739460:-1:exon
so has part: feature:3726994-3727047:-1:exon
so has part: feature:3709672-3709782:-1:exon
so has part: feature:3702631-3702699:-1:exon
so has part: feature:3700893-3701177:-1:exon
so has part: feature:3699332-3699445:-1:exon
so has part: feature:3693187-3693302:-1:exon
so has part: feature:3690244-3690378:-1:exon
so has part: feature:3689054-3689156:-1:exon
so has part: feature:3686127-3686187:-1:exon
so has part: feature:3684079-3684230:-1:exon
so has part: feature:3679930-3680004:-1:exon
so has part: feature:3677732-3677954:-1:exon
so has part: feature:3676194-3676363:-1:exon
so has part: feature:3670400-3670497:-1:exon
so has part: feature:3669881-3670011:-1:exon
so has part: feature:3666002-3666207:-1:exon
so has part: feature:3664605-3664777:-1:exon
so has part: feature:3663404-3663509:-1:exon
so has part: feature:3661685-3661909:-1:exon

XP_032894552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3775004-3775076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3743754-3743792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3739390-3739460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3726994-3727047:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3709672-3709782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3702631-3702699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3700893-3701177:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3699332-3699445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3693187-3693302:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3690244-3690378:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3689054-3689156:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3686127-3686187:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3684079-3684230:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3679930-3680004:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3677732-3677954:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3676194-3676363:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3670400-3670497:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3669881-3670011:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3666002-3666207:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3664605-3664777:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3663404-3663509:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3661685-3661909:-1:exon

ano5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ano5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-5 isoform X8
translation: MIDKQIHSKDSVFFCDGIRRIDFILSYVDDPKDADKKMERRKEFEDNLLKTGLELETENKDDSEDGKTYFVKVHAPWDVLAMYAEVMHIKVPIKENDIPQARENPFDRLLKPFRLDPAIINPEPDYFTAPFSKQRQELYLINNPETFFSPSTRNRIVYYILSRCKYTTEDGKRKLGIKRLLNNGTYTAAYPLHDCRYWKKSHDSKSDNERYILYKRWARFGQFYKEQPLNLIRKYYGEKIGIYFAWLGFYTEMLGIAGGVGFLCFLYGCITKDGNVWSDEICDAEIGGKIIMCPLCDGCDFWRLNITCQSTKNSHLFDNAATLFFAVFMGIWVTLFLELWKRRQAKLEYEWDLVDFEEEQQQLQIRPEYEANCSHHKKNPVTQELEPYIPISNQAFRFVLSGATVLFWIFLILICIIAVIVYRLSMYASFAKITGSMKNVKYIGTLFTPQMVTSVTASILNFIIIMILNYFYERVAIWITDLEIPKTHLEYENRLTMKMFLFQFVNYYSSCFYVAFFKGKFLGYPGKYNILFGSWRSEECDPGGCLIELTTQLTIIMAGKQIWGNIQESLLPWVKNWWVSRKARHHPERLYSRWEQDHDLQDMGQFGLFYEYLEMVIQFGFVTLFVASFPLAPVLALLNNIIEIRVDAWKFITQFRRPMAAKAHSIGIWQQILNSVAIVSVVINAFIVAFTSDMIPRLVYKYAYSVNDELPMKGYINNSLSIANTSVFDGNSLYNGNITSCRYKDYRYPSGHSFEYRHTMQYWHILAAKMAFIIIMEHVVFLVKFSIAALIPDVPSEVKARIKREKYLTQKILHEYELNKLREILAGKENVVVNKEMSAHAEKVELLSEEL
SIO_010081: ano5
subclass of: SO_0000673
so part of: ano5
location: complement(join(3661685..3661909,3663404..3663509,3664605..3664777,3666002..3666207,3669881..3670011,3670400..3670497,3676194..3676363,3677732..3677954,3679930..3680004,3684079..3684230,3686127..3686187,3689054..3689156,3690244..3690378,3693187..3693302,3699332..3699445,3700893..3701177,3702631..3702699,3709672..3709782,3726994..3726996))
location: region:3661685-3726996:-1
so has part: feature:3726994-3726996:-1:exon
so has part: feature:3709672-3709782:-1:exon
so has part: feature:3702631-3702699:-1:exon
so has part: feature:3700893-3701177:-1:exon
so has part: feature:3699332-3699445:-1:exon
so has part: feature:3693187-3693302:-1:exon
so has part: feature:3690244-3690378:-1:exon
so has part: feature:3689054-3689156:-1:exon
so has part: feature:3686127-3686187:-1:exon
so has part: feature:3684079-3684230:-1:exon
so has part: feature:3679930-3680004:-1:exon
so has part: feature:3677732-3677954:-1:exon
so has part: feature:3676194-3676363:-1:exon
so has part: feature:3670400-3670497:-1:exon
so has part: feature:3669881-3670011:-1:exon
so has part: feature:3666002-3666207:-1:exon
so has part: feature:3664605-3664777:-1:exon
so has part: feature:3663404-3663509:-1:exon
so has part: feature:3661685-3661909:-1:exon

XP_032894560.1
type: Protein
SIO_000068: ncbiprotein

position:3726996:-1
position: 3726996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3726994-3726996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3709672-3709782:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3702631-3702699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3700893-3701177:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3699332-3699445:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3693187-3693302:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3690244-3690378:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3689054-3689156:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3686127-3686187:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3684079-3684230:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3679930-3680004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3677732-3677954:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3676194-3676363:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3670400-3670497:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3669881-3670011:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3666002-3666207:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3664605-3664777:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3663404-3663509:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3661685-3661909:-1:exon

ano5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ano5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-5 isoform X7
translation: MQRKRLLFVNKRFRIDKQIHSKDSVFFCDGIRRIDFILSYVDDPKDADKKMERRKEFEDNLLKTGLELETENKDDSEDGKTYFVKVHAPWDVLAMYAEVMHIKVPIKENDIPQARENPFDRLLKPFRLDPAIINPEPDYFTAPFSKQRQELYLINNPETFFSPSTRNRIVYYILSRCKYTTEDGKRKLGIKRLLNNGTYTAAYPLHDCRYWKKSHDSKSDNERYILYKRWARFGQFYKEQPLNLIRKYYGEKIGIYFAWLGFYTEMLGIAGGVGFLCFLYGCITKDGNVWSDEICDAEIGGKIIMCPLCDGCDFWRLNITCQSTKNSHLFDNAATLFFAVFMGIWVTLFLELWKRRQAKLEYEWDLVDFEEEQQQLQIRPEYEANCSHHKKNPVTQELEPYIPISNQAFRFVLSGATVLFWIFLILICIIAVIVYRLSMYASFAKITGSMKNVKYIGTLFTPQMVTSVTASILNFIIIMILNYFYERVAIWITDLEIPKTHLEYENRLTMKMFLFQFVNYYSSCFYVAFFKGKFLGYPGKYNILFGSWRSEECDPGGCLIELTTQLTIIMAGKQIWGNIQESLLPWVKNWWVSRKARHHPERLYSRWEQDHDLQDMGQFGLFYEYLEMVIQFGFVTLFVASFPLAPVLALLNNIIEIRVDAWKFITQFRRPMAAKAHSIGIWQQILNSVAIVSVVINAFIVAFTSDMIPRLVYKYAYSVNDELPMKGYINNSLSIANTSVFDGNSLYNGNITSCRYKDYRYPSGHSFEYRHTMQYWHILAAKMAFIIIMEHVVFLVKFSIAALIPDVPSEVKARIKREKYLTQKILHEYELNKLREILAGKENVVVNKEMSAHAEKVELLSEEL
SIO_010081: ano5
subclass of: SO_0000673
so part of: ano5
location: complement(join(3661685..3661909,3663404..3663509,3664605..3664777,3666002..3666207,3669881..3670011,3670400..3670497,3676194..3676363,3677732..3677954,3679930..3680004,3684079..3684230,3686127..3686187,3689054..3689156,3690244..3690378,3693187..3693302,3699332..3699445,3700893..3701177,3702631..3702699,3709672..3709782,3720721..3720762))
location: region:3661685-3720762:-1
so has part: feature:3720721-3720762:-1:exon
so has part: feature:3709672-3709782:-1:exon
so has part: feature:3702631-3702699:-1:exon
so has part: feature:3700893-3701177:-1:exon
so has part: feature:3699332-3699445:-1:exon
so has part: feature:3693187-3693302:-1:exon
so has part: feature:3690244-3690378:-1:exon
so has part: feature:3689054-3689156:-1:exon
so has part: feature:3686127-3686187:-1:exon
so has part: feature:3684079-3684230:-1:exon
so has part: feature:3679930-3680004:-1:exon
so has part: feature:3677732-3677954:-1:exon
so has part: feature:3676194-3676363:-1:exon
so has part: feature:3670400-3670497:-1:exon
so has part: feature:3669881-3670011:-1:exon
so has part: feature:3666002-3666207:-1:exon
so has part: feature:3664605-3664777:-1:exon
so has part: feature:3663404-3663509:-1:exon
so has part: feature:3661685-3661909:-1:exon

XP_032894559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3720721-3720762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3709672-3709782:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3702631-3702699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3700893-3701177:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3699332-3699445:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3693187-3693302:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3690244-3690378:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3689054-3689156:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3686127-3686187:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3684079-3684230:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3679930-3680004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3677732-3677954:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3676194-3676363:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3670400-3670497:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3669881-3670011:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3666002-3666207:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3664605-3664777:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3663404-3663509:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3661685-3661909:-1:exon

ano5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ano5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-5 isoform X9
translation: MERRKEFEDNLLKTGLELETENKDDSEDGKTYFVKVHAPWDVLAMYAEVMHIKVPIKENDIPQARENPFDRLLKPFRLDPAIINPEPDYFTAPFSKQRQELYLINNPETFFSPSTRNRIVYYILSRCKYTTEDGKRKLGIKRLLNNGTYTAAYPLHDCRYWKKSHDSKSDNERYILYKRWARFGQFYKEQPLNLIRKYYGEKIGIYFAWLGFYTEMLGIAGGVGFLCFLYGCITKDGNVWSDEICDAEIGGKIIMCPLCDGCDFWRLNITCQSTKNSHLFDNAATLFFAVFMGIWVTLFLELWKRRQAKLEYEWDLVDFEEEQQQLQIRPEYEANCSHHKKNPVTQELEPYIPISNQAFRFVLSGATVLFWIFLILICIIAVIVYRLSMYASFAKITGSMKNVKYIGTLFTPQMVTSVTASILNFIIIMILNYFYERVAIWITDLEIPKTHLEYENRLTMKMFLFQFVNYYSSCFYVAFFKGKFLGYPGKYNILFGSWRSEECDPGGCLIELTTQLTIIMAGKQIWGNIQESLLPWVKNWWVSRKARHHPERLYSRWEQDHDLQDMGQFGLFYEYLEMVIQFGFVTLFVASFPLAPVLALLNNIIEIRVDAWKFITQFRRPMAAKAHSIGIWQQILNSVAIVSVVINAFIVAFTSDMIPRLVYKYAYSVNDELPMKGYINNSLSIANTSVFDGNSLYNGNITSCRYKDYRYPSGHSFEYRHTMQYWHILAAKMAFIIIMEHVVFLVKFSIAALIPDVPSEVKARIKREKYLTQKILHEYELNKLREILAGKENVVVNKEMSAHAEKVELLSEEL
SIO_010081: ano5
subclass of: SO_0000673
so part of: ano5
location: complement(join(3661685..3661909,3663404..3663509,3664605..3664777,3666002..3666207,3669881..3670011,3670400..3670497,3676194..3676363,3677732..3677954,3679930..3680004,3684079..3684230,3686127..3686187,3689054..3689156,3690244..3690378,3693187..3693302,3699332..3699445,3700893..3701177,3702631..3702699,3709672..3709674))
location: region:3661685-3709674:-1
so has part: feature:3709672-3709674:-1:exon
so has part: feature:3702631-3702699:-1:exon
so has part: feature:3700893-3701177:-1:exon
so has part: feature:3699332-3699445:-1:exon
so has part: feature:3693187-3693302:-1:exon
so has part: feature:3690244-3690378:-1:exon
so has part: feature:3689054-3689156:-1:exon
so has part: feature:3686127-3686187:-1:exon
so has part: feature:3684079-3684230:-1:exon
so has part: feature:3679930-3680004:-1:exon
so has part: feature:3677732-3677954:-1:exon
so has part: feature:3676194-3676363:-1:exon
so has part: feature:3670400-3670497:-1:exon
so has part: feature:3669881-3670011:-1:exon
so has part: feature:3666002-3666207:-1:exon
so has part: feature:3664605-3664777:-1:exon
so has part: feature:3663404-3663509:-1:exon
so has part: feature:3661685-3661909:-1:exon

XP_032894561.1
type: Protein
SIO_000068: ncbiprotein

position:3709674:-1
position: 3709674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3709672-3709674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3702631-3702699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3700893-3701177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3699332-3699445:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3693187-3693302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3690244-3690378:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3689054-3689156:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3686127-3686187:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3684079-3684230:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3679930-3680004:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3677732-3677954:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3676194-3676363:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3670400-3670497:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3669881-3670011:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3666002-3666207:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3664605-3664777:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3663404-3663509:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3661685-3661909:-1:exon

ano5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ano5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-5 isoform X9
translation: MERRKEFEDNLLKTGLELETENKDDSEDGKTYFVKVHAPWDVLAMYAEVMHIKVPIKENDIPQARENPFDRLLKPFRLDPAIINPEPDYFTAPFSKQRQELYLINNPETFFSPSTRNRIVYYILSRCKYTTEDGKRKLGIKRLLNNGTYTAAYPLHDCRYWKKSHDSKSDNERYILYKRWARFGQFYKEQPLNLIRKYYGEKIGIYFAWLGFYTEMLGIAGGVGFLCFLYGCITKDGNVWSDEICDAEIGGKIIMCPLCDGCDFWRLNITCQSTKNSHLFDNAATLFFAVFMGIWVTLFLELWKRRQAKLEYEWDLVDFEEEQQQLQIRPEYEANCSHHKKNPVTQELEPYIPISNQAFRFVLSGATVLFWIFLILICIIAVIVYRLSMYASFAKITGSMKNVKYIGTLFTPQMVTSVTASILNFIIIMILNYFYERVAIWITDLEIPKTHLEYENRLTMKMFLFQFVNYYSSCFYVAFFKGKFLGYPGKYNILFGSWRSEECDPGGCLIELTTQLTIIMAGKQIWGNIQESLLPWVKNWWVSRKARHHPERLYSRWEQDHDLQDMGQFGLFYEYLEMVIQFGFVTLFVASFPLAPVLALLNNIIEIRVDAWKFITQFRRPMAAKAHSIGIWQQILNSVAIVSVVINAFIVAFTSDMIPRLVYKYAYSVNDELPMKGYINNSLSIANTSVFDGNSLYNGNITSCRYKDYRYPSGHSFEYRHTMQYWHILAAKMAFIIIMEHVVFLVKFSIAALIPDVPSEVKARIKREKYLTQKILHEYELNKLREILAGKENVVVNKEMSAHAEKVELLSEEL
SIO_010081: ano5
subclass of: SO_0000673
so part of: ano5
location: complement(join(3661685..3661909,3663404..3663509,3664605..3664777,3666002..3666207,3669881..3670011,3670400..3670497,3676194..3676363,3677732..3677954,3679930..3680004,3684079..3684230,3686127..3686187,3689054..3689156,3690244..3690378,3693187..3693302,3699332..3699445,3700893..3701177,3702631..3702699,3709672..3709674))
location: region:3661685-3709674:-1
so has part: feature:3709672-3709674:-1:exon
so has part: feature:3702631-3702699:-1:exon
so has part: feature:3700893-3701177:-1:exon
so has part: feature:3699332-3699445:-1:exon
so has part: feature:3693187-3693302:-1:exon
so has part: feature:3690244-3690378:-1:exon
so has part: feature:3689054-3689156:-1:exon
so has part: feature:3686127-3686187:-1:exon
so has part: feature:3684079-3684230:-1:exon
so has part: feature:3679930-3680004:-1:exon
so has part: feature:3677732-3677954:-1:exon
so has part: feature:3676194-3676363:-1:exon
so has part: feature:3670400-3670497:-1:exon
so has part: feature:3669881-3670011:-1:exon
so has part: feature:3666002-3666207:-1:exon
so has part: feature:3664605-3664777:-1:exon
so has part: feature:3663404-3663509:-1:exon
so has part: feature:3661685-3661909:-1:exon

XP_032894562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3709672-3709674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3702631-3702699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3700893-3701177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3699332-3699445:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3693187-3693302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3690244-3690378:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3689054-3689156:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3686127-3686187:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3684079-3684230:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3679930-3680004:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3677732-3677954:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3676194-3676363:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3670400-3670497:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3669881-3670011:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3666002-3666207:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3664605-3664777:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3663404-3663509:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3661685-3661909:-1:exon

ano5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ano5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-5 isoform X9
translation: MERRKEFEDNLLKTGLELETENKDDSEDGKTYFVKVHAPWDVLAMYAEVMHIKVPIKENDIPQARENPFDRLLKPFRLDPAIINPEPDYFTAPFSKQRQELYLINNPETFFSPSTRNRIVYYILSRCKYTTEDGKRKLGIKRLLNNGTYTAAYPLHDCRYWKKSHDSKSDNERYILYKRWARFGQFYKEQPLNLIRKYYGEKIGIYFAWLGFYTEMLGIAGGVGFLCFLYGCITKDGNVWSDEICDAEIGGKIIMCPLCDGCDFWRLNITCQSTKNSHLFDNAATLFFAVFMGIWVTLFLELWKRRQAKLEYEWDLVDFEEEQQQLQIRPEYEANCSHHKKNPVTQELEPYIPISNQAFRFVLSGATVLFWIFLILICIIAVIVYRLSMYASFAKITGSMKNVKYIGTLFTPQMVTSVTASILNFIIIMILNYFYERVAIWITDLEIPKTHLEYENRLTMKMFLFQFVNYYSSCFYVAFFKGKFLGYPGKYNILFGSWRSEECDPGGCLIELTTQLTIIMAGKQIWGNIQESLLPWVKNWWVSRKARHHPERLYSRWEQDHDLQDMGQFGLFYEYLEMVIQFGFVTLFVASFPLAPVLALLNNIIEIRVDAWKFITQFRRPMAAKAHSIGIWQQILNSVAIVSVVINAFIVAFTSDMIPRLVYKYAYSVNDELPMKGYINNSLSIANTSVFDGNSLYNGNITSCRYKDYRYPSGHSFEYRHTMQYWHILAAKMAFIIIMEHVVFLVKFSIAALIPDVPSEVKARIKREKYLTQKILHEYELNKLREILAGKENVVVNKEMSAHAEKVELLSEEL
SIO_010081: ano5
subclass of: SO_0000673
so part of: ano5
location: complement(join(3661685..3661909,3663404..3663509,3664605..3664777,3666002..3666207,3669881..3670011,3670400..3670497,3676194..3676363,3677732..3677954,3679930..3680004,3684079..3684230,3686127..3686187,3689054..3689156,3690244..3690378,3693187..3693302,3699332..3699445,3700893..3701177,3702631..3702699,3709672..3709674))
location: region:3661685-3709674:-1
so has part: feature:3709672-3709674:-1:exon
so has part: feature:3702631-3702699:-1:exon
so has part: feature:3700893-3701177:-1:exon
so has part: feature:3699332-3699445:-1:exon
so has part: feature:3693187-3693302:-1:exon
so has part: feature:3690244-3690378:-1:exon
so has part: feature:3689054-3689156:-1:exon
so has part: feature:3686127-3686187:-1:exon
so has part: feature:3684079-3684230:-1:exon
so has part: feature:3679930-3680004:-1:exon
so has part: feature:3677732-3677954:-1:exon
so has part: feature:3676194-3676363:-1:exon
so has part: feature:3670400-3670497:-1:exon
so has part: feature:3669881-3670011:-1:exon
so has part: feature:3666002-3666207:-1:exon
so has part: feature:3664605-3664777:-1:exon
so has part: feature:3663404-3663509:-1:exon
so has part: feature:3661685-3661909:-1:exon

XP_032894563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3709672-3709674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3702631-3702699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3700893-3701177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3699332-3699445:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3693187-3693302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3690244-3690378:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3689054-3689156:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3686127-3686187:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3684079-3684230:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3679930-3680004:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3677732-3677954:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3676194-3676363:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3670400-3670497:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3669881-3670011:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3666002-3666207:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3664605-3664777:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3663404-3663509:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3661685-3661909:-1:exon

LOC116984380
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984380
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4007469..4082167)
location: region:4007469-4082167:-1
so has part: feature:4007469-4082167:-1:exon
subclass of: SO_0000010

116984380
type: Gene
SIO_000068: ncbigene

position:4007469:-1
position: 4007469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4082167:-1
position: 4082167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4007469-4082167:-1:exon

LOC116984380
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116984380
product: protein kinase C-binding protein NELL1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033038538.1
SIO_010081: LOC116984380
subclass of: SO_0000673
so part of: LOC116984380
location: complement(join(4007469..4008417,4014495..4014719,4019597..4019773,4020311..4020516,4074276..4074371,4082140..4082167))
location: region:4007469-4082167:-1
so has part: feature:4082140-4082167:-1:exon
so has part: feature:4074276-4074371:-1:exon
so has part: feature:4020311-4020516:-1:exon
so has part: feature:4019597-4019773:-1:exon
so has part: feature:4014495-4014719:-1:exon
so has part: feature:4007469-4008417:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4082140-4082167:-1:exon

position:4082140:-1
position: 4082140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4074276-4074371:-1:exon

position:4074276:-1
position: 4074276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4074371:-1
position: 4074371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4020311-4020516:-1:exon

position:4020311:-1
position: 4020311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4020516:-1
position: 4020516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4019597-4019773:-1:exon

position:4019597:-1
position: 4019597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4019773:-1
position: 4019773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4014495-4014719:-1:exon

position:4014495:-1
position: 4014495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4014719:-1
position: 4014719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4007469-4008417:-1:exon

position:4008417:-1
position: 4008417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116984380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116984380
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kinase C-binding protein NELL1-like
translation: MPTVGIVASAFCEGGCRNGGTCVAPEVCVCPPGFTGSTCQTDIDECATGLHSCWNDSVCVNLEGGFDCRCPLGERCPGDCPQEEEEEEQPKRNGQVWTLAGDRCSVCSCQDGKIFCRRAVCDCQDPDVDLFCCSECDSRVTSQCLHQNGHLVYRNGDIWTFSCQQCRCLQGEVDCWPVSCPALHCEYTTMADGECCPHCVSDPCLADSAVYDIRQTCTDNHGIARLGGSIWTSAGSPCTTCTCKNGNICCSVDVECLYN
SIO_010081: LOC116984380
subclass of: SO_0000673
so part of: LOC116984380
location: complement(join(4008370..4008417,4014495..4014719,4019597..4019773,4020311..4020516,4074276..4074371,4082140..4082167))
location: region:4008370-4082167:-1
so has part: feature:4082140-4082167:-1:exon
so has part: feature:4074276-4074371:-1:exon
so has part: feature:4020311-4020516:-1:exon
so has part: feature:4019597-4019773:-1:exon
so has part: feature:4014495-4014719:-1:exon
so has part: feature:4008370-4008417:-1:exon

XP_032894429.1
type: Protein
SIO_000068: ncbiprotein

position:4008370:-1
position: 4008370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4082140-4082167:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4074276-4074371:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4020311-4020516:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4019597-4019773:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4014495-4014719:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4008370-4008417:-1:exon

LOC116984519
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4025825..4042593)
location: region:4025825-4042593:-1
so has part: feature:4025825-4042593:-1:exon
subclass of: SO_0000011

116984519
type: Gene
SIO_000068: ncbigene

position:4025825:-1
position: 4025825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4042593:-1
position: 4042593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4025825-4042593:-1:exon

LOC116984519
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116984519
product: uncharacterized LOC116984519
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004415052.1
SIO_010081: LOC116984519
subclass of: SO_0000673
so part of: LOC116984519
location: complement(join(4025825..4025858,4039347..4039348,4042440..4042593))
location: region:4025825-4042593:-1
so has part: feature:4042440-4042593:-1:exon
so has part: feature:4039347-4039348:-1:exon
so has part: feature:4025825-4025858:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4042440-4042593:-1:exon

position:4042440:-1
position: 4042440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4039347-4039348:-1:exon

position:4039347:-1
position: 4039347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4039348:-1
position: 4039348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4025825-4025858:-1:exon

position:4025858:-1
position: 4025858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116984860
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116984860
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4163641..4163832
location: region:4163641-4163832:1
so has part: feature:4163641-4163832:1:exon
subclass of: SO_0000623

116984860
type: Gene
SIO_000068: ncbigene