Amblyraja radiata isolate CabotCenter1 chromosome 18, sAmbRad1.1.pri, whole genome shotgun sequence.
type: Entry
definition: Amblyraja radiata isolate CabotCenter1 chromosome 18, sAmbRad1.1.pri, whole genome shotgun sequence.
sequence version: NC_045973.1
sequence date: 2021-04-05
sequence: sequence
division: CON
label: NC_045973.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA610638
dblink: SAMN09948523
keyword: WGS
keyword: RefSeq
source: Amblyraja radiata (thorny skate)
organism: Amblyraja radiata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Amblyraja.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021383.1.\nAssembly name: sAmbRad1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/21. The original whole-genome shotgun project has the\naccession JAAGWR000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 13-JAN-2020\nAssembly Method :: Canu v. 1.7; purge_haplotigs v. bitbucket\n 7.10.2018; scaff10x v. 4.1.0; Bionano\n Solve DLS v. 3.3; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes Illumina polishing v.\n 1.3.1; purge_dups v.\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n gEVAL manual curation v. 2020-01-13; VGP\n assembly pipeline v. 1.5\nAssembly Name :: sAmbRad1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 128.24x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Amblyraja radiata Updated Annotation\n Release 100.20210331\nAnnotation Version :: 100.20210331\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 49750689
topology: linear
so has quality: SO_0000987
location: 1..49750689
location: region:1-49750689:1
RO_0002162: 386614

NC_045973
type: RefSeq
SIO_000068: refseq

PRJNA610638
type: BioProject
SIO_000068: bioproject

SAMN09948523
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49750689:1
position: 49750689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-49750689:1:source
so part of: sequence
organism: Amblyraja radiata
mol type: genomic DNA
isolate: CabotCenter1
chromosome: 18
sex: male
tissue type: testis, liver
country: USA: Gulf of Main
lat lon: 43.1336 N 68.3266 W
collection date: 2017-09-18
collected by: Jeff Kneebone

386614
type: Taxonomy
SIO_000068: taxonomy

LOC116983015
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116983015
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(43312..60525)
location: region:43312-60525:-1
so has part: feature:43312-60525:-1:exon
subclass of: SO_0000011

116983015
type: Gene
SIO_000068: ncbigene

position:43312:-1
position: 43312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60525:-1
position: 60525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43312-60525:-1:exon

LOC116983015
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116983015
product: uncharacterized LOC116983015, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004414593.1
SIO_010081: LOC116983015
subclass of: SO_0000673
so part of: LOC116983015
location: complement(join(43312..43325,56612..56618,57945..58181,58618..58980))
location: region:43312-58980:-1
so has part: feature:58618-58980:-1:exon
so has part: feature:57945-58181:-1:exon
so has part: feature:56612-56618:-1:exon
so has part: feature:43312-43325:-1:exon

position:58980:-1
position: 58980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58618-58980:-1:exon

position:58618:-1
position: 58618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57945-58181:-1:exon

position:57945:-1
position: 57945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58181:-1
position: 58181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:56612-56618:-1:exon

position:56612:-1
position: 56612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56618:-1
position: 56618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:43312-43325:-1:exon

position:43325:-1
position: 43325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116983015
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116983015
product: uncharacterized LOC116983015, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004414594.1
SIO_010081: LOC116983015
subclass of: SO_0000673
so part of: LOC116983015
location: complement(join(43312..43325,57940..58181,58618..58980))
location: region:43312-58980:-1
so has part: feature:58618-58980:-1:exon
so has part: feature:57940-58181:-1:exon
so has part: feature:43312-43325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58618-58980:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57940-58181:-1:exon

position:57940:-1
position: 57940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:43312-43325:-1:exon

LOC116983015
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116983015
product: uncharacterized LOC116983015, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004414595.1
SIO_010081: LOC116983015
subclass of: SO_0000673
so part of: LOC116983015
location: complement(join(57851..58181,58618..58698,60161..60525))
location: region:57851-60525:-1
so has part: feature:60161-60525:-1:exon
so has part: feature:58618-58698:-1:exon
so has part: feature:57851-58181:-1:exon

position:57851:-1
position: 57851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60161-60525:-1:exon

position:60161:-1
position: 60161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:58618-58698:-1:exon

position:58698:-1
position: 58698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:57851-58181:-1:exon

LOC116983015
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116983015
product: uncharacterized LOC116983015, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XR_004414592.1
SIO_010081: LOC116983015
subclass of: SO_0000673
so part of: LOC116983015
location: complement(join(57851..58181,58618..58979))
location: region:57851-58979:-1
so has part: feature:58618-58979:-1:exon
so has part: feature:57851-58181:-1:exon

position:58979:-1
position: 58979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58618-58979:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57851-58181:-1:exon

LOC116983016
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116983016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 61723..74335
location: region:61723-74335:1
so has part: feature:61723-74335:1:exon
subclass of: SO_0000011

116983016
type: Gene
SIO_000068: ncbigene

position:61723:1
position: 61723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74335:1
position: 74335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61723-74335:1:exon

LOC116983016
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116983016
product: uncharacterized LOC116983016
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004414596.1
SIO_010081: LOC116983016
subclass of: SO_0000673
so part of: LOC116983016
location: join(61723..61928,69654..69665,74323..74335)
location: region:61723-74335:1
so has part: feature:61723-61928:1:exon
so has part: feature:69654-69665:1:exon
so has part: feature:74323-74335:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61723-61928:1:exon

position:61928:1
position: 61928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:69654-69665:1:exon

position:69654:1
position: 69654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69665:1
position: 69665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:74323-74335:1:exon

position:74323:1
position: 74323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

wnk2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: wnk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(107611..258165)
location: region:107611-258165:-1
so has part: feature:107611-258165:-1:exon
subclass of: SO_0000010

116983017
type: Gene
SIO_000068: ncbigene

position:107611:-1
position: 107611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258165:-1
position: 258165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107611-258165:-1:exon

wnk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wnk2
product: WNK lysine deficient protein kinase 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033036529.1
SIO_010081: wnk2
subclass of: SO_0000673
so part of: wnk2
location: complement(join(107611..108119,110989..111263,111616..111657,125174..125272,134698..134889,138286..138518,140260..140891,146643..147829,148324..148443,154254..154287,155446..155604,155713..155829,155920..156085,157931..157989,176315..176511,185280..185556,189691..189910,195625..195713,206722..206879,209465..209685,212750..212922,257402..258165))
location: region:107611-258165:-1
so has part: feature:257402-258165:-1:exon
so has part: feature:212750-212922:-1:exon
so has part: feature:209465-209685:-1:exon
so has part: feature:206722-206879:-1:exon
so has part: feature:195625-195713:-1:exon
so has part: feature:189691-189910:-1:exon
so has part: feature:185280-185556:-1:exon
so has part: feature:176315-176511:-1:exon
so has part: feature:157931-157989:-1:exon
so has part: feature:155920-156085:-1:exon
so has part: feature:155713-155829:-1:exon
so has part: feature:155446-155604:-1:exon
so has part: feature:154254-154287:-1:exon
so has part: feature:148324-148443:-1:exon
so has part: feature:146643-147829:-1:exon
so has part: feature:140260-140891:-1:exon
so has part: feature:138286-138518:-1:exon
so has part: feature:134698-134889:-1:exon
so has part: feature:125174-125272:-1:exon
so has part: feature:111616-111657:-1:exon
so has part: feature:110989-111263:-1:exon
so has part: feature:107611-108119:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257402-258165:-1:exon

position:257402:-1
position: 257402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:212750-212922:-1:exon

position:212750:-1
position: 212750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212922:-1
position: 212922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:209465-209685:-1:exon

position:209465:-1
position: 209465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209685:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:206722-206879:-1:exon

position:206722:-1
position: 206722
reference: sequence
type: ReverseStrandPosition
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position:206879:-1
position: 206879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:195625-195713:-1:exon

position:195625:-1
position: 195625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195713:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:189691-189910:-1:exon

position:189691:-1
position: 189691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189910:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:185280-185556:-1:exon

position:185280:-1
position: 185280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185556:-1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:176315-176511:-1:exon

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urn:…
SIO_000300: 9
SIO_000628: feature:157931-157989:-1:exon

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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:155920-156085:-1:exon

position:155920:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156085:-1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:155713-155829:-1:exon

position:155713:-1
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reference: sequence
type: ReverseStrandPosition
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position:155829:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:155446-155604:-1:exon

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reference: sequence
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position:155604:-1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:154254-154287:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:148324-148443:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:146643-147829:-1:exon

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reference: sequence
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position:147829:-1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:140260-140891:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:140891:-1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:138286-138518:-1:exon

position:138286:-1
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reference: sequence
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position:138518:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:134698-134889:-1:exon

position:134698:-1
position: 134698
reference: sequence
type: ReverseStrandPosition
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position:134889:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:125174-125272:-1:exon

position:125174:-1
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reference: sequence
type: ReverseStrandPosition
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position:125272:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:111616-111657:-1:exon

position:111616:-1
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reference: sequence
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type: ExactPosition

position:111657:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:110989-111263:-1:exon

position:110989:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111263:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:107611-108119:-1:exon

position:108119:-1
position: 108119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

wnk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wnk2
product: WNK lysine deficient protein kinase 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033036526.1
SIO_010081: wnk2
subclass of: SO_0000673
so part of: wnk2
location: complement(join(107611..108119,110989..111263,111616..111657,125174..125272,134698..134889,138286..138518,140260..140891,146643..147829,148324..148443,154254..154287,155446..155604,155713..155829,155920..156085,157931..157989,170170..170337,176315..176511,185280..185556,189691..189910,195625..195713,206722..206879,209465..209685,212750..212922,257402..258165))
location: region:107611-258165:-1
so has part: feature:257402-258165:-1:exon
so has part: feature:212750-212922:-1:exon
so has part: feature:209465-209685:-1:exon
so has part: feature:206722-206879:-1:exon
so has part: feature:195625-195713:-1:exon
so has part: feature:189691-189910:-1:exon
so has part: feature:185280-185556:-1:exon
so has part: feature:176315-176511:-1:exon
so has part: feature:170170-170337:-1:exon
so has part: feature:157931-157989:-1:exon
so has part: feature:155920-156085:-1:exon
so has part: feature:155713-155829:-1:exon
so has part: feature:155446-155604:-1:exon
so has part: feature:154254-154287:-1:exon
so has part: feature:148324-148443:-1:exon
so has part: feature:146643-147829:-1:exon
so has part: feature:140260-140891:-1:exon
so has part: feature:138286-138518:-1:exon
so has part: feature:134698-134889:-1:exon
so has part: feature:125174-125272:-1:exon
so has part: feature:111616-111657:-1:exon
so has part: feature:110989-111263:-1:exon
so has part: feature:107611-108119:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257402-258165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212750-212922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209465-209685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206722-206879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195625-195713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189691-189910:-1:exon

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wnk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wnk2
product: WNK lysine deficient protein kinase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033036524.1
SIO_010081: wnk2
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wnk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wnk2
product: WNK lysine deficient protein kinase 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033036527.1
SIO_010081: wnk2
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wnk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wnk2
product: WNK lysine deficient protein kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033036522.1
SIO_010081: wnk2
subclass of: SO_0000673
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wnk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wnk2
product: WNK lysine deficient protein kinase 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033036525.1
SIO_010081: wnk2
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wnk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wnk2
product: WNK lysine deficient protein kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033036523.1
SIO_010081: wnk2
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so has part: feature:140260-140891:-1:exon
so has part: feature:138286-138518:-1:exon
so has part: feature:134698-134889:-1:exon
so has part: feature:111616-111657:-1:exon
so has part: feature:110989-111263:-1:exon
so has part: feature:107611-108119:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257402-258165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212750-212922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209465-209685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206722-206879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195625-195713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189691-189910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185280-185556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176315-176511:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:173582-173704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173448-173486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:170170-170337:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157931-157989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155920-156085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:155713-155829:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:155446-155604:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:154254-154287:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:148324-148443:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:146643-147829:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:140260-140891:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:138286-138518:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:134698-134889:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:111616-111657:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:110989-111263:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:107611-108119:-1:exon

wnk2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wnk2
product: WNK lysine deficient protein kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033036521.1
SIO_010081: wnk2
subclass of: SO_0000673
so part of: wnk2
location: complement(join(107611..108119,110989..111263,111616..111657,125174..125272,134698..134889,138286..138518,140260..140891,146643..147829,148324..148443,154254..154287,155446..155604,155713..155829,155920..156085,157931..157989,170170..170337,173448..173486,173582..173704,176315..176511,185280..185556,189691..189910,195625..195713,206722..206879,209465..209685,212750..212922,257402..258165))
location: region:107611-258165:-1
so has part: feature:257402-258165:-1:exon
so has part: feature:212750-212922:-1:exon
so has part: feature:209465-209685:-1:exon
so has part: feature:206722-206879:-1:exon
so has part: feature:195625-195713:-1:exon
so has part: feature:189691-189910:-1:exon
so has part: feature:185280-185556:-1:exon
so has part: feature:176315-176511:-1:exon
so has part: feature:173582-173704:-1:exon
so has part: feature:173448-173486:-1:exon
so has part: feature:170170-170337:-1:exon
so has part: feature:157931-157989:-1:exon
so has part: feature:155920-156085:-1:exon
so has part: feature:155713-155829:-1:exon
so has part: feature:155446-155604:-1:exon
so has part: feature:154254-154287:-1:exon
so has part: feature:148324-148443:-1:exon
so has part: feature:146643-147829:-1:exon
so has part: feature:140260-140891:-1:exon
so has part: feature:138286-138518:-1:exon
so has part: feature:134698-134889:-1:exon
so has part: feature:125174-125272:-1:exon
so has part: feature:111616-111657:-1:exon
so has part: feature:110989-111263:-1:exon
so has part: feature:107611-108119:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257402-258165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212750-212922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209465-209685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206722-206879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195625-195713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189691-189910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185280-185556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176315-176511:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:173582-173704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173448-173486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:170170-170337:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157931-157989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155920-156085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:155713-155829:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:155446-155604:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:154254-154287:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:148324-148443:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:146643-147829:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:140260-140891:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:138286-138518:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:134698-134889:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:125174-125272:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:111616-111657:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:110989-111263:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:107611-108119:-1:exon

wnk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wnk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK2 isoform X8
translation: MEPQPEVSGGGGKLEPERETEPERETELEPERETELEPERETELEPELETELEPELVLETELELETELEPGDATAGQSGPLAGAGSGSGDSGEAGAEGDVCGRSGAAAAGMWRCPHAAPAHDHDHDHPQRFVRRTVPPGSGPGSGSLPGGAEAEGSSTESRGDEAGDTDSRDGEREMEMEMESPGVAGGRELPQGQSEENEEEAEMKAVATSPDGRFLKFDIELGRGSFKTVYKGLDAETWLEVAWCELQDRKLTKAERQRFREEAEMLKGLQHPNIVRFYDSWESPLKGKKCIVLVTELMTSGTLKTYLKRFKVMKTKVMRSWCRQILKGLYFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGVKPASFGKVIDPEIKEIIGECICQNKDERYAIKDLLNHAFFAEDTGVRVELAEEDDGIKNSIAMRLWVDDPKKLKGKPKDNGAIEFSFNLNKENPEDVAQEMIDSGFFQECDSKTVAKSIRDRVALITRRRVRSQQVNKANAERETDNQDKEKNGINQVIDTSQQGQQISSELEEPEADQHLCPSLLKTVTSMMSDSTCDSGQGSTLYSDSQDSQQSVVYSSVHEAVPSAVQQIYSPPQCEIQAPSISSQSIAHYQHTSTEIHPEHEKHQTAAYGGSYDNVYSDAASGKEMSDGYDGIHTSGKQENKSSRKHHRRSTRTRSRQEKTTRPKLTILNVSNVGDKMVECQLETHNHKMVTFKFDLDGDAPDEIAIYMVDNDFILEIEKEIFIEQMKDIMDKAEDMLTEEAEDGRNSTGFQVAGKSETVSRMSTSQQKCQQNVLHTGRRWFIICPVVENSTTRKSESSADIHPSQQPATSTLETENTSDDRPMDSLAWQISGSSAATHGITSGHCIAPPSSVPVLSNINDSASLPDQVISPSIPTKQLEPEEKSRNEVQQSSHQVNSPVSFQSQIANHNPLELQSKTACQQQTEEQSDIAFSPPSVVDMPCSVSDSLAIQSISIQTELSLPAQSVEPNPLCSFDLEQQPVMQAYVPDISQPVSMQSFTNPMQSSETVSNSSTSSQLQSPAQIPSINQQYPSQAHPQSITMTGIVSSQQQLSLVVESDVEGPRKIEFTDNTIKTLDEKLRTLLYQEPGGILPVHPAADSADAAAAECMGCTEELYAEPLGEVHDATLSVTVSVHDVKHIDAPIHSVLPITQVPNVGSLPSVTSPPENLLEETSNQCEALREVLYQHVKTPEIHIGRDSTLTGENGPSDNVAPTSQDTDNKIVYNAKNGTKPIKDPPKIHLLSTSSANSESDQKTDKLSIRRINTIGRFSVISTKDEVTLKYPGLNRYSAPPELYPMESPTSPDVKPLVKQAQSPVPMEVKLWSQVSSDSDEPFNVKPKVVQKLLICNQTTTDGEFSLSGKLAALLKSDDKQVPEHVIGQTPPTISIHSPSPSHSSYMSSDNDSEFEDSDMKKELQTLREKHMKEISELQVHQRHEIQELYSRLGKPLPTALGFLQAVPPTSRRRRTSKNKLKAGRLLNPLVQSLKNAASNTSLSSNTNIQTNSCIASKHQDASCSSDTLEATQSEAVQTQQPGSIKSSLSSDDYQGFINEGAGAAQGDAAQGWTVFHQTSERVTYKSNSKPRTRFLSGPVSLSIWSTLKRLCLGKDRSRSSSSSSTSHSVQRVLNQHQSQPQQEQSPPQPSQTNNSNNKKGTFTDDLHKLVDDWTKETVGAAQFKPSLNQLKQNQHRFDVGVRQKLSQPDGRSAAGKMRKCSAPVTCPAAAALGPGNSTIPAGVSAAPIPGPLPAYVLPLCQYGGVIPTTIYGVHWQGLSSSALQPGLLNTQGISSFPSLNKGGLQMFPVPLQKPIINPSGPNMRTT
SIO_010081: wnk2
subclass of: SO_0000673
so part of: wnk2
location: complement(join(107766..108119,110989..111263,111616..111657,125174..125272,134698..134889,138286..138518,140260..140891,146643..147829,148324..148443,154254..154287,155446..155604,155713..155829,155920..156085,157931..157989,176315..176511,185280..185556,189691..189910,195625..195713,206722..206879,209465..209685,212750..212922,257402..258151))
location: region:107766-258151:-1
so has part: feature:257402-258151:-1:exon
so has part: feature:212750-212922:-1:exon
so has part: feature:209465-209685:-1:exon
so has part: feature:206722-206879:-1:exon
so has part: feature:195625-195713:-1:exon
so has part: feature:189691-189910:-1:exon
so has part: feature:185280-185556:-1:exon
so has part: feature:176315-176511:-1:exon
so has part: feature:157931-157989:-1:exon
so has part: feature:155920-156085:-1:exon
so has part: feature:155713-155829:-1:exon
so has part: feature:155446-155604:-1:exon
so has part: feature:154254-154287:-1:exon
so has part: feature:148324-148443:-1:exon
so has part: feature:146643-147829:-1:exon
so has part: feature:140260-140891:-1:exon
so has part: feature:138286-138518:-1:exon
so has part: feature:134698-134889:-1:exon
so has part: feature:125174-125272:-1:exon
so has part: feature:111616-111657:-1:exon
so has part: feature:110989-111263:-1:exon
so has part: feature:107766-108119:-1:exon

XP_032892420.1
type: Protein
SIO_000068: ncbiprotein

position:107766:-1
position: 107766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258151:-1
position: 258151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257402-258151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212750-212922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209465-209685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206722-206879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195625-195713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189691-189910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185280-185556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176315-176511:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:157931-157989:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:155920-156085:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:155713-155829:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:155446-155604:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:154254-154287:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:148324-148443:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:146643-147829:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:140260-140891:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:138286-138518:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:134698-134889:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:125174-125272:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:111616-111657:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:110989-111263:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:107766-108119:-1:exon

wnk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wnk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK2 isoform X6
translation: MEPQPEVSGGGGKLEPERETEPERETELEPERETELEPERETELEPELETELEPELVLETELELETELEPGDATAGQSGPLAGAGSGSGDSGEAGAEGDVCGRSGAAAAGMWRCPHAAPAHDHDHDHPQRFVRRTVPPGSGPGSGSLPGGAEAEGSSTESRGDEAGDTDSRDGEREMEMEMESPGVAGGRELPQGQSEENEEEAEMKAVATSPDGRFLKFDIELGRGSFKTVYKGLDAETWLEVAWCELQDRKLTKAERQRFREEAEMLKGLQHPNIVRFYDSWESPLKGKKCIVLVTELMTSGTLKTYLKRFKVMKTKVMRSWCRQILKGLYFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGVKPASFGKVIDPEIKEIIGECICQNKDERYAIKDLLNHAFFAEDTGVRVELAEEDDGIKNSIAMRLWVDDPKKLKGKPKDNGAIEFSFNLNKENPEDVAQEMIDSGFFQECDSKTVAKSIRDRVALITRRRVRSQQVNKANAERETDNQDKEKNGINQVIDTSQQGQQISSELEEPEADQHLCPSLLKTVTSMMSDSTCDSGQGSTLYSDSQDSQQSVVYSSVHEAVPSAVQQIYSPPQCEIQAPSISSQSIAHYQHTSTQQMPTAEDFVPPVSQPLPQYQVQQLPRPALPPQTMQMIPLQISSEPLQINQSTPAMEIHPEHEKHQTAAYGGSYDNVYSDAASGKEMSDGYDGIHTSGKQENKSSRKHHRRSTRTRSRQEKTTRPKLTILNVSNVGDKMVECQLETHNHKMVTFKFDLDGDAPDEIAIYMVDNDFILEIEKEIFIEQMKDIMDKAEDMLTEEAEDGRNSTGFQVAGKSETVSRMSTSQQKCQQNVLHTGRRWFIICPVVENSTTRKSESSADIHPSQQPATSTLETENTSDDRPMDSLAWQISGSSAATHGITSGHCIAPPSSVPVLSNINDSASLPDQVISPSIPTKQLEPEEKSRNEVQQSSHQVNSPVSFQSQIANHNPLELQSKTACQQQTEEQSDIAFSPPSVVDMPCSVSDSLAIQSISIQTELSLPAQSVEPNPLCSFDLEQQPVMQAYVPDISQPVSMQSFTNPMQSSETVSNSSTSSQLQSPAQIPSINQQYPSQAHPQSITMTGIVSSQQQLSLVVESDVEGPRKIEFTDNTIKTLDEKLRTLLYQEPGGILPVHPAADSADAAAAECMGCTEELYAEPLGEVHDATLSVTVSVHDVKHIDAPIHSVLPITQVPNVGSLPSVTSPPENLLEETSNQCEALREVLYQHVKTPEIHIGRDSTLTGENGPSDNVAPTSQDTDNKIVYNAKNGTKPIKDPPKIHLLSTSSANSESDQKTDKLSIRRINTIGRFSVISTKDEVTLKYPGLNRYSAPPELYPMESPTSPDVKPLVKQAQSPVPMEVKLWSQVSSDSDEPFNVKPKVVQKLLICNQTTTDGEFSLSGKLAALLKSDDKQVPEHVIGQTPPTISIHSPSPSHSSYMSSDNDSEFEDSDMKKELQTLREKHMKEISELQVHQRHEIQELYSRLGKPLPTALGFLQAVPPTSRRRRTSKNKLKAGRLLNPLVQSLKNAASNTSLSSNTNIQTNSCIASKHQDASCSSDTLEATQSEAVQTQQPGSIKSSLSSDDYQGFINEGAGAAQGDAAQGWTVFHQTSERVTYKSNSKPRTRFLSGPVSLSIWSTLKRLCLGKDRSRSSSSSSTSHSVQRVLNQHQSQPQQEQSPPQPSQTNNSNNKKGTFTDDLHKLVDDWTKETVGAAQFKPSLNQLKQNQHRFDVGVRQKLSQPDGRSAAGKMRKCSAPVTCPAAAALGPGNSTIPAGVSAAPIPGPLPAYVLPLCQYGGVIPTTIYGVHWQGLSSSALQPGLLNTQGISSFPSLNKGGLQMFPVPLQKPIINPSGPNMRTT
SIO_010081: wnk2
subclass of: SO_0000673
so part of: wnk2
location: complement(join(107766..108119,110989..111263,111616..111657,125174..125272,134698..134889,138286..138518,140260..140891,146643..147829,148324..148443,154254..154287,155446..155604,155713..155829,155920..156085,157931..157989,170170..170337,176315..176511,185280..185556,189691..189910,195625..195713,206722..206879,209465..209685,212750..212922,257402..258151))
location: region:107766-258151:-1
so has part: feature:257402-258151:-1:exon
so has part: feature:212750-212922:-1:exon
so has part: feature:209465-209685:-1:exon
so has part: feature:206722-206879:-1:exon
so has part: feature:195625-195713:-1:exon
so has part: feature:189691-189910:-1:exon
so has part: feature:185280-185556:-1:exon
so has part: feature:176315-176511:-1:exon
so has part: feature:170170-170337:-1:exon
so has part: feature:157931-157989:-1:exon
so has part: feature:155920-156085:-1:exon
so has part: feature:155713-155829:-1:exon
so has part: feature:155446-155604:-1:exon
so has part: feature:154254-154287:-1:exon
so has part: feature:148324-148443:-1:exon
so has part: feature:146643-147829:-1:exon
so has part: feature:140260-140891:-1:exon
so has part: feature:138286-138518:-1:exon
so has part: feature:134698-134889:-1:exon
so has part: feature:125174-125272:-1:exon
so has part: feature:111616-111657:-1:exon
so has part: feature:110989-111263:-1:exon
so has part: feature:107766-108119:-1:exon

XP_032892417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257402-258151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212750-212922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209465-209685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206722-206879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195625-195713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189691-189910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185280-185556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176315-176511:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:170170-170337:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:157931-157989:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:155920-156085:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:155713-155829:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155446-155604:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:154254-154287:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:148324-148443:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:146643-147829:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:140260-140891:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:138286-138518:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:134698-134889:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:125174-125272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:111616-111657:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:110989-111263:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:107766-108119:-1:exon

wnk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wnk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK2 isoform X4
translation: MEPQPEVSGGGGKLEPERETEPERETELEPERETELEPERETELEPELETELEPELVLETELELETELEPGDATAGQSGPLAGAGSGSGDSGEAGAEGDVCGRSGAAAAGMWRCPHAAPAHDHDHDHPQRFVRRTVPPGSGPGSGSLPGGAEAEGSSTESRGDEAGDTDSRDGEREMEMEMESPGVAGGRELPQGQSEENEEEAEMKAVATSPDGRFLKFDIELGRGSFKTVYKGLDAETWLEVAWCELQDRKLTKAERQRFREEAEMLKGLQHPNIVRFYDSWESPLKGKKCIVLVTELMTSGTLKTYLKRFKVMKTKVMRSWCRQILKGLYFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGVKPASFGKVIDPEIKEIIGECICQNKDERYAIKDLLNHAFFAEDTGVRVELAEEDDGIKNSIAMRLWVDDPKKLKGKPKDNGAIEFSFNLNKENPEDVAQEMIDSGFFQECDSKTVAKSIRDRVALITRRRVRSQQVNKANAERETDNQDKEKNGINQVIDTSQQGQQISSELEEPEADQHLCPSLLKTVTSMMSDSTCDSGQGSTLYSDSQDSQQSVVYSSVHEAVPSAVQQIYSPPQCEIQAPSISSQSIAHYQHTSTLDPYFCTATFHFQQQMPTAEDFVPPVSQPLPQYQVQQLPRPALPPQTMQMIPLQISSEPLQINQSTPAMEIHPEHEKHQTAAYGGSYDNVYSDAASGKEMSDGYDGIHTSGKQENKSSRKHHRRSTRTRSRQEKTTRPKLTILNVSNVGDKMVECQLETHNHKMVTFKFDLDGDAPDEIAIYMVDNDFILEIEKEIFIEQMKDIMDKAEDMLTEEAEDGRNSTGFQVAGKSETVSRMSTSQQKCQQNVLHTGRRWFIICPVVENSTTRKSESSADIHPSQQPATSTLETENTSDDRPMDSLAWQISGSSAATHGITSGHCIAPPSSVPVLSNINDSASLPDQVISPSIPTKQLEPEEKSRNEVQQSSHQVNSPVSFQSQIANHNPLELQSKTACQQQTEEQSDIAFSPPSVVDMPCSVSDSLAIQSISIQTELSLPAQSVEPNPLCSFDLEQQPVMQAYVPDISQPVSMQSFTNPMQSSETVSNSSTSSQLQSPAQIPSINQQYPSQAHPQSITMTGIVSSQQQLSLVVESDVEGPRKIEFTDNTIKTLDEKLRTLLYQEPGGILPVHPAADSADAAAAECMGCTEELYAEPLGEVHDATLSVTVSVHDVKHIDAPIHSVLPITQVPNVGSLPSVTSPPENLLEETSNQCEALREVLYQHVKTPEIHIGRDSTLTGENGPSDNVAPTSQDTDNKIVYNAKNGTKPIKDPPKIHLLSTSSANSESDQKTDKLSIRRINTIGRFSVISTKDEVTLKYPGLNRYSAPPELYPMESPTSPDVKPLVKQAQSPVPMEVKLWSQVSSDSDEPFNVKPKVVQKLLICNQTTTDGEFSLSGKLAALLKSDDKQVPEHVIGQTPPTISIHSPSPSHSSYMSSDNDSEFEDSDMKKELQTLREKHMKEISELQVHQRHEIQELYSRLGKPLPTALGFLQAVPPTSRRRRTSKNKLKAGRLLNPLVQSLKNAASNTSLSSNTNIQTNSCIASKHQDASCSSDTLEATQSEAVQTQQPGSIKSSLSSDDYQGFINEGAGAAQGDAAQGWTVFHQTSERVTYKSNSKPRTRFLSGPVSLSIWSTLKRLCLGKDRSRSSSSSSTSHSVQRVLNQHQSQPQQEQSPPQPSQTNNSNNKKGTFTDDLHKLVDDWTKETVGAAQFKPSLNQLKQNQHRFDVGVRQKLSQPDGRSAAGKMRKCSAPVTCPAAAALGPGNSTIPAGVSAAPIPGPLPAYVLPLCQYGGVIPTTIYGVHWQGLSSSALQPGLLNTQGISSFPSLNKGGLQMFPVPLQKPIINPSGPNMRTT
SIO_010081: wnk2
subclass of: SO_0000673
so part of: wnk2
location: complement(join(107766..108119,110989..111263,111616..111657,125174..125272,134698..134889,138286..138518,140260..140891,146643..147829,148324..148443,154254..154287,155446..155604,155713..155829,155920..156085,157931..157989,170170..170337,173448..173486,176315..176511,185280..185556,189691..189910,195625..195713,206722..206879,209465..209685,212750..212922,257402..258151))
location: region:107766-258151:-1
so has part: feature:257402-258151:-1:exon
so has part: feature:212750-212922:-1:exon
so has part: feature:209465-209685:-1:exon
so has part: feature:206722-206879:-1:exon
so has part: feature:195625-195713:-1:exon
so has part: feature:189691-189910:-1:exon
so has part: feature:185280-185556:-1:exon
so has part: feature:176315-176511:-1:exon
so has part: feature:173448-173486:-1:exon
so has part: feature:170170-170337:-1:exon
so has part: feature:157931-157989:-1:exon
so has part: feature:155920-156085:-1:exon
so has part: feature:155713-155829:-1:exon
so has part: feature:155446-155604:-1:exon
so has part: feature:154254-154287:-1:exon
so has part: feature:148324-148443:-1:exon
so has part: feature:146643-147829:-1:exon
so has part: feature:140260-140891:-1:exon
so has part: feature:138286-138518:-1:exon
so has part: feature:134698-134889:-1:exon
so has part: feature:125174-125272:-1:exon
so has part: feature:111616-111657:-1:exon
so has part: feature:110989-111263:-1:exon
so has part: feature:107766-108119:-1:exon

XP_032892415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257402-258151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212750-212922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209465-209685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206722-206879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195625-195713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189691-189910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185280-185556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176315-176511:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:173448-173486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:170170-170337:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:157931-157989:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:155920-156085:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155713-155829:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:155446-155604:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:154254-154287:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:148324-148443:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:146643-147829:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:140260-140891:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:138286-138518:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:134698-134889:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:125174-125272:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:111616-111657:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:110989-111263:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:107766-108119:-1:exon

wnk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wnk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK2 isoform X7
translation: MEPQPEVSGGGGKLEPERETEPERETELEPERETELEPERETELEPELETELEPELVLETELELETELEPGDATAGQSGPLAGAGSGSGDSGEAGAEGDVCGRSGAAAAGMWRCPHAAPAHDHDHDHPQRFVRRTVPPGSGPGSGSLPGGAEAEGSSTESRGDEAGDTDSRDGEREMEMEMESPGVAGGRELPQGQSEENEEEAEMKAVATSPDGRFLKFDIELGRGSFKTVYKGLDAETWLEVAWCELQDRKLTKAERQRFREEAEMLKGLQHPNIVRFYDSWESPLKGKKCIVLVTELMTSGTLKTYLKRFKVMKTKVMRSWCRQILKGLYFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGVKPASFGKVIDPEIKEIIGECICQNKDERYAIKDLLNHAFFAEDTGVRVELAEEDDGIKNSIAMRLWVDDPKKLKGKPKDNGAIEFSFNLNKENPEDVAQEMIDSGFFQECDSKTVAKSIRDRVALITRRRVRSQQVNKANAERETDNQDKEKNGINQVIDTSQQGQQISSELEEPEADQHLCPSLLKTVTSMMSDSTCDSGQGSTLYSDSQDSQQSVVYSSVHEAVPSAVQQIYSPPQCEIQAPSISSQSIAHYQHTSTPYSLMHVPSVALPTQSHQFGPQQHYQQPAPLPAMQMAQVQQLDPYFCTATFHFQEIHPEHEKHQTAAYGGSYDNVYSDAASGKEMSDGYDGIHTSGKQENKSSRKHHRRSTRTRSRQEKTTRPKLTILNVSNVGDKMVECQLETHNHKMVTFKFDLDGDAPDEIAIYMVDNDFILEIEKEIFIEQMKDIMDKAEDMLTEEAEDGRNSTGFQVAGKSETVSRMSTSQQKCQQNVLHTGRRWFIICPVVENSTTRKSESSADIHPSQQPATSTLETENTSDDRPMDSLAWQISGSSAATHGITSGHCIAPPSSVPVLSNINDSASLPDQVISPSIPTKQLEPEEKSRNEVQQSSHQVNSPVSFQSQIANHNPLELQSKTACQQQTEEQSDIAFSPPSVVDMPCSVSDSLAIQSISIQTELSLPAQSVEPNPLCSFDLEQQPVMQAYVPDISQPVSMQSFTNPMQSSETVSNSSTSSQLQSPAQIPSINQQYPSQAHPQSITMTGIVSSQQQLSLVVESDVEGPRKIEFTDNTIKTLDEKLRTLLYQEPGGILPVHPAADSADAAAAECMGCTEELYAEPLGEVHDATLSVTVSVHDVKHIDAPIHSVLPITQVPNVGSLPSVTSPPENLLEETSNQCEALREVLYQHVKTPEIHIGRDSTLTGENGPSDNVAPTSQDTDNKIVYNAKNGTKPIKDPPKIHLLSTSSANSESDQKTDKLSIRRINTIGRFSVISTKDEVTLKYPGLNRYSAPPELYPMESPTSPDVKPLVKQAQSPVPMEVKLWSQVSSDSDEPFNVKPKVVQKLLICNQTTTDGEFSLSGKLAALLKSDDKQVPEHVIGQTPPTISIHSPSPSHSSYMSSDNDSEFEDSDMKKELQTLREKHMKEISELQVHQRHEIQELYSRLGKPLPTALGFLQAVPPTSRRRRTSKNKLKAGRLLNPLVQSLKNAASNTSLSSNTNIQTNSCIASKHQDASCSSDTLEATQSEAVQTQQPGSIKSSLSSDDYQGFINEGAGAAQGDAAQGWTVFHQTSERVTYKSNSKPRTRFLSGPVSLSIWSTLKRLCLGKDRSRSSSSSSTSHSVQRVLNQHQSQPQQEQSPPQPSQTNNSNNKKGTFTDDLHKLVDDWTKETVGAAQFKPSLNQLKQNQHRFDVGVRQKLSQPDGRSAAGKMRKCSAPVTCPAAAALGPGNSTIPAGVSAAPIPGPLPAYVLPLCQYGGVIPTTIYGVHWQGLSSSALQPGLLNTQGISSFPSLNKGGLQMFPVPLQKPIINPSGPNMRTT
SIO_010081: wnk2
subclass of: SO_0000673
so part of: wnk2
location: complement(join(107766..108119,110989..111263,111616..111657,125174..125272,134698..134889,138286..138518,140260..140891,146643..147829,148324..148443,154254..154287,155446..155604,155713..155829,155920..156085,157931..157989,173448..173486,173582..173704,176315..176511,185280..185556,189691..189910,195625..195713,206722..206879,209465..209685,212750..212922,257402..258151))
location: region:107766-258151:-1
so has part: feature:257402-258151:-1:exon
so has part: feature:212750-212922:-1:exon
so has part: feature:209465-209685:-1:exon
so has part: feature:206722-206879:-1:exon
so has part: feature:195625-195713:-1:exon
so has part: feature:189691-189910:-1:exon
so has part: feature:185280-185556:-1:exon
so has part: feature:176315-176511:-1:exon
so has part: feature:173582-173704:-1:exon
so has part: feature:173448-173486:-1:exon
so has part: feature:157931-157989:-1:exon
so has part: feature:155920-156085:-1:exon
so has part: feature:155713-155829:-1:exon
so has part: feature:155446-155604:-1:exon
so has part: feature:154254-154287:-1:exon
so has part: feature:148324-148443:-1:exon
so has part: feature:146643-147829:-1:exon
so has part: feature:140260-140891:-1:exon
so has part: feature:138286-138518:-1:exon
so has part: feature:134698-134889:-1:exon
so has part: feature:125174-125272:-1:exon
so has part: feature:111616-111657:-1:exon
so has part: feature:110989-111263:-1:exon
so has part: feature:107766-108119:-1:exon

XP_032892418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257402-258151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212750-212922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209465-209685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206722-206879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195625-195713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189691-189910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185280-185556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176315-176511:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:173582-173704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173448-173486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:157931-157989:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:155920-156085:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155713-155829:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:155446-155604:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:154254-154287:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:148324-148443:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:146643-147829:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:140260-140891:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:138286-138518:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:134698-134889:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:125174-125272:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:111616-111657:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:110989-111263:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:107766-108119:-1:exon

wnk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wnk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK2 isoform X2
translation: MEPQPEVSGGGGKLEPERETEPERETELEPERETELEPERETELEPELETELEPELVLETELELETELEPGDATAGQSGPLAGAGSGSGDSGEAGAEGDVCGRSGAAAAGMWRCPHAAPAHDHDHDHPQRFVRRTVPPGSGPGSGSLPGGAEAEGSSTESRGDEAGDTDSRDGEREMEMEMESPGVAGGRELPQGQSEENEEEAEMKAVATSPDGRFLKFDIELGRGSFKTVYKGLDAETWLEVAWCELQDRKLTKAERQRFREEAEMLKGLQHPNIVRFYDSWESPLKGKKCIVLVTELMTSGTLKTYLKRFKVMKTKVMRSWCRQILKGLYFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGVKPASFGKVIDPEIKEIIGECICQNKDERYAIKDLLNHAFFAEDTGVRVELAEEDDGIKNSIAMRLWVDDPKKLKGKPKDNGAIEFSFNLNKENPEDVAQEMIDSGFFQECDSKTVAKSIRDRVALITRRRVRSQQVNKANAERETDNQDKEKNGINQVIDTSQQGQQISSELEEPEADQHLCPSLLKTVTSMMSDSTCDSGQGSTLYSDSQDSQQSVVYSSVHEAVPSAVQQIYSPPQCEIQAPSISSQSIAHYQHTSTPYSLMHVPSVALPTQSHQFGPQQHYQQPAPLPAMQMAQVQQLDPYFCTATFHFQQQMPTAEDFVPPVSQPLPQYQVQQLPRPALPPQTMQMIPLQISSEPLQINQSTPAMEIHPEHEKHQTAAYGGSYDNVYSDAASGKEMSDGYDGIHTSGKQENKSSRKHHRRSTRTRSRQEKTTRPKLTILNVSNVGDKMVECQLETHNHKMVTFKFDLDGDAPDEIAIYMVDNDFILEIEKEIFIEQMKDIMDKAEDMLTEEAEDGRNSTGFQVAGKSETMSTSQQKCQQNVLHTGRRWFIICPVVENSTTRKSESSADIHPSQQPATSTLETENTSDDRPMDSLAWQISGSSAATHGITSGHCIAPPSSVPVLSNINDSASLPDQVISPSIPTKQLEPEEKSRNEVQQSSHQVNSPVSFQSQIANHNPLELQSKTACQQQTEEQSDIAFSPPSVVDMPCSVSDSLAIQSISIQTELSLPAQSVEPNPLCSFDLEQQPVMQAYVPDISQPVSMQSFTNPMQSSETVSNSSTSSQLQSPAQIPSINQQYPSQAHPQSITMTGIVSSQQQLSLVVESDVEGPRKIEFTDNTIKTLDEKLRTLLYQEPGGILPVHPAADSADAAAAECMGCTEELYAEPLGEVHDATLSVTVSVHDVKHIDAPIHSVLPITQVPNVGSLPSVTSPPENLLEETSNQCEALREVLYQHVKTPEIHIGRDSTLTGENGPSDNVAPTSQDTDNKIVYNAKNGTKPIKDPPKIHLLSTSSANSESDQKTDKLSIRRINTIGRFSVISTKDEVTLKYPGLNRYSAPPELYPMESPTSPDVKPLVKQAQSPVPMEVKLWSQVSSDSDEPFNVKPKVVQKLLICNQTTTDGEFSLSGKLAALLKSDDKQVPEHVIGQTPPTISIHSPSPSHSSYMSSDNDSEFEDSDMKKELQTLREKHMKEISELQVHQRHEIQELYSRLGKPLPTALGFLQAVPPTSRRRRTSKNKLKAGRLLNPLVQSLKNAASNTSLSSNTNIQTNSCIASKHQDASCSSDTLEATQSEAVQTQQPGSIKSSLSSDDYQGFINEGAGAAQGDAAQGWTVFHQTSERVTYKSNSKPRTRFLSGPVSLSIWSTLKRLCLGKDRSRSSSSSSTSHSVQRVLNQHQSQPQQEQSPPQPSQTNNSNNKKGTFTDDLHKLVDDWTKETVGAAQFKPSLNQLKQNQHRFDVGVRQKLSQPDGRSAAGKMRKCSAPVTCPAAAALGPGNSTIPAGVSAAPIPGPLPAYVLPLCQYGGVIPTTIYGVHWQGLSSSALQPGLLNTQGISSFPSLNKG…
SIO_010081: wnk2
subclass of: SO_0000673
so part of: wnk2
location: complement(join(107766..108119,110989..111263,111616..111657,125174..125272,134698..134889,138286..138518,140260..140891,146643..147829,148324..148443,154254..154287,155455..155604,155713..155829,155920..156085,157931..157989,170170..170337,173448..173486,173582..173704,176315..176511,185280..185556,189691..189910,195625..195713,206722..206879,209465..209685,212750..212922,257402..258151))
location: region:107766-258151:-1
so has part: feature:257402-258151:-1:exon
so has part: feature:212750-212922:-1:exon
so has part: feature:209465-209685:-1:exon
so has part: feature:206722-206879:-1:exon
so has part: feature:195625-195713:-1:exon
so has part: feature:189691-189910:-1:exon
so has part: feature:185280-185556:-1:exon
so has part: feature:176315-176511:-1:exon
so has part: feature:173582-173704:-1:exon
so has part: feature:173448-173486:-1:exon
so has part: feature:170170-170337:-1:exon
so has part: feature:157931-157989:-1:exon
so has part: feature:155920-156085:-1:exon
so has part: feature:155713-155829:-1:exon
so has part: feature:155455-155604:-1:exon
so has part: feature:154254-154287:-1:exon
so has part: feature:148324-148443:-1:exon
so has part: feature:146643-147829:-1:exon
so has part: feature:140260-140891:-1:exon
so has part: feature:138286-138518:-1:exon
so has part: feature:134698-134889:-1:exon
so has part: feature:125174-125272:-1:exon
so has part: feature:111616-111657:-1:exon
so has part: feature:110989-111263:-1:exon
so has part: feature:107766-108119:-1:exon

XP_032892413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257402-258151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212750-212922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209465-209685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206722-206879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195625-195713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189691-189910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185280-185556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176315-176511:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:173582-173704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173448-173486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:170170-170337:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157931-157989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155920-156085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:155713-155829:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:155455-155604:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:154254-154287:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:148324-148443:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:146643-147829:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:140260-140891:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:138286-138518:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:134698-134889:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:125174-125272:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:111616-111657:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:110989-111263:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:107766-108119:-1:exon

wnk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wnk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK2 isoform X5
translation: MEPQPEVSGGGGKLEPERETEPERETELEPERETELEPERETELEPELETELEPELVLETELELETELEPGDATAGQSGPLAGAGSGSGDSGEAGAEGDVCGRSGAAAAGMWRCPHAAPAHDHDHDHPQRFVRRTVPPGSGPGSGSLPGGAEAEGSSTESRGDEAGDTDSRDGEREMEMEMESPGVAGGRELPQGQSEENEEEAEMKAVATSPDGRFLKFDIELGRGSFKTVYKGLDAETWLEVAWCELQDRKLTKAERQRFREEAEMLKGLQHPNIVRFYDSWESPLKGKKCIVLVTELMTSGTLKTYLKRFKVMKTKVMRSWCRQILKGLYFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGVKPASFGKVIDPEIKEIIGECICQNKDERYAIKDLLNHAFFAEDTGVRVELAEEDDGIKNSIAMRLWVDDPKKLKGKPKDNGAIEFSFNLNKENPEDVAQEMIDSGFFQECDSKTVAKSIRDRVALITRRRVRSQQVNKANAERETDNQDKEKNGINQVIDTSQQGQQISSELEEPEADQHLCPSLLKTVTSMMSDSTCDSGQGSTLYSDSQDSQQSVVYSSVHEAVPSAVQQIYSPPQCEIQAPSISSQSIAHYQHTSTPYSLMHVPSVALPTQSHQFGPQQHYQQPAPLPAMQMAQVQQLDPYFCTATFHFQQQMPTAEDFVPPVSQPLPQYQVQQLPRPALPPQTMQMIPLQISSEPLQINQSTPAMEIHPEHEKHQTAAYGGSYDNVYSDAASGKEMSDGYDGIHTSGKQENKSSRKHHRRSTRTRSRQEKTTRPKLTILNVSNVGDKMVECQLETHNHKMVTFKFDLDGDAPDEIAIYMVDNDFILEIEKEIFIEQMKDIMDKAEDMLTEEAEDGRNSTGFQVAGKSETVSRMSTSQQKCQQNVLHTGRRWFIICPVVENSTTRKSESSADIHPSQQPATSTLETENTSDDRPMDSLAWQISGSSAATHGITSGHCIAPPSSVPVLSNINDSASLPDQVISPSIPTKQLEPEEKSRNEVQQSSHQVNSPVSFQSQIANHNPLELQSKTACQQQTEEQSDIAFSPPSVVDMPCSVSDSLAIQSISIQTELSLPAQSVEPNPLCSFDLEQQPVMQAYVPDISQPVSMQSFTNPMQSSETVSNSSTSSQLQSPAQIPSINQQYPSQAHPQSITMTGIVSSQQQLSLVVESDVEGPRKIEFTDNTIKTLDEKLRTLLYQEPGGILPVHPAADSADAAAAECMGCTEELYAEPLGEVHDATLSVTVSVHDVKHIDAPIHSVLPITQVPNVGSLPSVTSPPENLLEETSNQCEALREVLYQHVKTPEIHIGRDSTLTGENGPSDNVAPTSQDTDNKIVYNAKNGTKPIKDPPKIHLLSTSSANSESDQKTDKLSIRRINTIGRFSVISTKDEVTLKYPGLNRYSAPPELYPMESPTSPDVKPLVKQAQSPVPMEVKLWSQVSSDSDEPFNVKPKVVQKLLICNQTTTDGEFSLSGKLAALLKSDDKQVPEHVIGQTPPTISIHSPSPSHSSYMSSDNDSEFEDSDMKKELQTLREKHMKEISELQVHQRHEIQELYSRLGKPLPTALGFLQAVPPTSRRRRTSKNKLKAGRLLNPLVQSLKNAASNTSLSSNTNIQTNSCIASKHQDASCSSDTLEATQSEAVQTQQPGSIKSSLSSDDYQGFINEGAGAAQGDAAQGSSSSSSTSHSVQRVLNQHQSQPQQEQSPPQPSQTNNSNNKKGTFTDDLHKLVDDWTKETVGAAQFKPSLNQLKQNQHRFDVGVRQKLSQPDGRSAAGKMRKCSAPVTCPAAAALGPGNSTIPAGVSAAPIPGPLPAYVLPLCQYGGVIPTTIYGVHWQGLSSSALQPGLLNTQGISSFPSLNKGGLQMFPVPLQKPIINPSGPNMRTT
SIO_010081: wnk2
subclass of: SO_0000673
so part of: wnk2
location: complement(join(107766..108119,110989..111263,134698..134889,138286..138518,140260..140891,146643..147829,148324..148443,154254..154287,155446..155604,155713..155829,155920..156085,157931..157989,170170..170337,173448..173486,173582..173704,176315..176511,185280..185556,189691..189910,195625..195713,206722..206879,209465..209685,212750..212922,257402..258151))
location: region:107766-258151:-1
so has part: feature:257402-258151:-1:exon
so has part: feature:212750-212922:-1:exon
so has part: feature:209465-209685:-1:exon
so has part: feature:206722-206879:-1:exon
so has part: feature:195625-195713:-1:exon
so has part: feature:189691-189910:-1:exon
so has part: feature:185280-185556:-1:exon
so has part: feature:176315-176511:-1:exon
so has part: feature:173582-173704:-1:exon
so has part: feature:173448-173486:-1:exon
so has part: feature:170170-170337:-1:exon
so has part: feature:157931-157989:-1:exon
so has part: feature:155920-156085:-1:exon
so has part: feature:155713-155829:-1:exon
so has part: feature:155446-155604:-1:exon
so has part: feature:154254-154287:-1:exon
so has part: feature:148324-148443:-1:exon
so has part: feature:146643-147829:-1:exon
so has part: feature:140260-140891:-1:exon
so has part: feature:138286-138518:-1:exon
so has part: feature:134698-134889:-1:exon
so has part: feature:110989-111263:-1:exon
so has part: feature:107766-108119:-1:exon

XP_032892416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257402-258151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212750-212922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209465-209685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206722-206879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195625-195713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189691-189910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185280-185556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176315-176511:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:173582-173704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173448-173486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:170170-170337:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157931-157989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155920-156085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:155713-155829:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:155446-155604:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:154254-154287:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:148324-148443:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:146643-147829:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:140260-140891:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:138286-138518:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:134698-134889:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:110989-111263:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:107766-108119:-1:exon

wnk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wnk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK2 isoform X3
translation: MEPQPEVSGGGGKLEPERETEPERETELEPERETELEPERETELEPELETELEPELVLETELELETELEPGDATAGQSGPLAGAGSGSGDSGEAGAEGDVCGRSGAAAAGMWRCPHAAPAHDHDHDHPQRFVRRTVPPGSGPGSGSLPGGAEAEGSSTESRGDEAGDTDSRDGEREMEMEMESPGVAGGRELPQGQSEENEEEAEMKAVATSPDGRFLKFDIELGRGSFKTVYKGLDAETWLEVAWCELQDRKLTKAERQRFREEAEMLKGLQHPNIVRFYDSWESPLKGKKCIVLVTELMTSGTLKTYLKRFKVMKTKVMRSWCRQILKGLYFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGVKPASFGKVIDPEIKEIIGECICQNKDERYAIKDLLNHAFFAEDTGVRVELAEEDDGIKNSIAMRLWVDDPKKLKGKPKDNGAIEFSFNLNKENPEDVAQEMIDSGFFQECDSKTVAKSIRDRVALITRRRVRSQQVNKANAERETDNQDKEKNGINQVIDTSQQGQQISSELEEPEADQHLCPSLLKTVTSMMSDSTCDSGQGSTLYSDSQDSQQSVVYSSVHEAVPSAVQQIYSPPQCEIQAPSISSQSIAHYQHTSTPYSLMHVPSVALPTQSHQFGPQQHYQQPAPLPAMQMAQVQQLDPYFCTATFHFQQQMPTAEDFVPPVSQPLPQYQVQQLPRPALPPQTMQMIPLQISSEPLQINQSTPAMEIHPEHEKHQTAAYGGSYDNVYSDAASGKEMSDGYDGIHTSGKQENKSSRKHHRRSTRTRSRQEKTTRPKLTILNVSNVGDKMVECQLETHNHKMVTFKFDLDGDAPDEIAIYMVDNDFILEIEKEIFIEQMKDIMDKAEDMLTEEAEDGRNSTGFQVAGKSETVSRMSTSQQKCQQNVLHTGRRWFIICPVVENSTTRKSESSADIHPSQQPATSTLETENTSDDRPMDSLAWQISGSSAATHGITSGHCIAPPSSVPVLSNINDSASLPDQVISPSIPTKQLEPEEKSRNEVQQSSHQVNSPVSFQSQIANHNPLELQSKTACQQQTEEQSDIAFSPPSVVDMPCSVSDSLAIQSISIQTELSLPAQSVEPNPLCSFDLEQQPVMQAYVPDISQPVSMQSFTNPMQSSETVSNSSTSSQLQSPAQIPSINQQYPSQAHPQSITMTGIVSSQQQLSLVVESDVEGPRKIEFTDNTIKTLDEKLRTLLYQEPGGILPVHPAADSADAAAAECMGCTEELYAEPLGEVHDATLSVTVSVHDVKHIDAPIHSVLPITQVPNVGSLPSVTSPPENLLEETSNQCEALREVLYQHVKTPEIHIGRDSTLTGENGPSDNVAPTSQDTDNKIVYNAKNGTKPIKDPPKIHLLSTSSANSESDQKTDKLSIRRINTIGRFSVISTKDEVTLKYPGLNRYSAPPELYPMESPTSPDVKPLVKQAQSPVPMEVKLWSQVSSDSDEPFNVKPKVVQKLLICNQTTTDGEFSLSGKLAALLKSDDKQVPEHVIGQTPPTISIHSPSPSHSSYMSSDNDSEFEDSDMKKELQTLREKHMKEISELQVHQRHEIQELYSRLGKPLPTALGFLQAVPPTSRRRRTSKNKLKAGRLLNPLVQSLKNAASNTSLSSNTNIQTNSCIASKHQDASCSSDTLEATQSEAVQTQQPGSIKSSLSSDDYQGFINEGAGAAQGDAAQGSTLKRLCLGKDRSRSSSSSSTSHSVQRVLNQHQSQPQQEQSPPQPSQTNNSNNKKGTFTDDLHKLVDDWTKETVGAAQFKPSLNQLKQNQHRFDVGVRQKLSQPDGRSAAGKMRKCSAPVTCPAAAALGPGNSTIPAGVSAAPIPGPLPAYVLPLCQYGGVIPTTIYGVHWQGLSSSALQPGLLNTQGISSFPSLNKGGLQMFPVPLQKPIINPSGPNMRTT
SIO_010081: wnk2
subclass of: SO_0000673
so part of: wnk2
location: complement(join(107766..108119,110989..111263,111616..111657,134698..134889,138286..138518,140260..140891,146643..147829,148324..148443,154254..154287,155446..155604,155713..155829,155920..156085,157931..157989,170170..170337,173448..173486,173582..173704,176315..176511,185280..185556,189691..189910,195625..195713,206722..206879,209465..209685,212750..212922,257402..258151))
location: region:107766-258151:-1
so has part: feature:257402-258151:-1:exon
so has part: feature:212750-212922:-1:exon
so has part: feature:209465-209685:-1:exon
so has part: feature:206722-206879:-1:exon
so has part: feature:195625-195713:-1:exon
so has part: feature:189691-189910:-1:exon
so has part: feature:185280-185556:-1:exon
so has part: feature:176315-176511:-1:exon
so has part: feature:173582-173704:-1:exon
so has part: feature:173448-173486:-1:exon
so has part: feature:170170-170337:-1:exon
so has part: feature:157931-157989:-1:exon
so has part: feature:155920-156085:-1:exon
so has part: feature:155713-155829:-1:exon
so has part: feature:155446-155604:-1:exon
so has part: feature:154254-154287:-1:exon
so has part: feature:148324-148443:-1:exon
so has part: feature:146643-147829:-1:exon
so has part: feature:140260-140891:-1:exon
so has part: feature:138286-138518:-1:exon
so has part: feature:134698-134889:-1:exon
so has part: feature:111616-111657:-1:exon
so has part: feature:110989-111263:-1:exon
so has part: feature:107766-108119:-1:exon

XP_032892414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257402-258151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212750-212922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209465-209685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206722-206879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195625-195713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189691-189910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185280-185556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176315-176511:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:173582-173704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173448-173486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:170170-170337:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157931-157989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155920-156085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:155713-155829:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:155446-155604:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:154254-154287:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:148324-148443:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:146643-147829:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:140260-140891:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:138286-138518:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:134698-134889:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:111616-111657:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:110989-111263:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:107766-108119:-1:exon

wnk2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wnk2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK2 isoform X1
translation: MEPQPEVSGGGGKLEPERETEPERETELEPERETELEPERETELEPELETELEPELVLETELELETELEPGDATAGQSGPLAGAGSGSGDSGEAGAEGDVCGRSGAAAAGMWRCPHAAPAHDHDHDHPQRFVRRTVPPGSGPGSGSLPGGAEAEGSSTESRGDEAGDTDSRDGEREMEMEMESPGVAGGRELPQGQSEENEEEAEMKAVATSPDGRFLKFDIELGRGSFKTVYKGLDAETWLEVAWCELQDRKLTKAERQRFREEAEMLKGLQHPNIVRFYDSWESPLKGKKCIVLVTELMTSGTLKTYLKRFKVMKTKVMRSWCRQILKGLYFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGVKPASFGKVIDPEIKEIIGECICQNKDERYAIKDLLNHAFFAEDTGVRVELAEEDDGIKNSIAMRLWVDDPKKLKGKPKDNGAIEFSFNLNKENPEDVAQEMIDSGFFQECDSKTVAKSIRDRVALITRRRVRSQQVNKANAERETDNQDKEKNGINQVIDTSQQGQQISSELEEPEADQHLCPSLLKTVTSMMSDSTCDSGQGSTLYSDSQDSQQSVVYSSVHEAVPSAVQQIYSPPQCEIQAPSISSQSIAHYQHTSTPYSLMHVPSVALPTQSHQFGPQQHYQQPAPLPAMQMAQVQQLDPYFCTATFHFQQQMPTAEDFVPPVSQPLPQYQVQQLPRPALPPQTMQMIPLQISSEPLQINQSTPAMEIHPEHEKHQTAAYGGSYDNVYSDAASGKEMSDGYDGIHTSGKQENKSSRKHHRRSTRTRSRQEKTTRPKLTILNVSNVGDKMVECQLETHNHKMVTFKFDLDGDAPDEIAIYMVDNDFILEIEKEIFIEQMKDIMDKAEDMLTEEAEDGRNSTGFQVAGKSETVSRMSTSQQKCQQNVLHTGRRWFIICPVVENSTTRKSESSADIHPSQQPATSTLETENTSDDRPMDSLAWQISGSSAATHGITSGHCIAPPSSVPVLSNINDSASLPDQVISPSIPTKQLEPEEKSRNEVQQSSHQVNSPVSFQSQIANHNPLELQSKTACQQQTEEQSDIAFSPPSVVDMPCSVSDSLAIQSISIQTELSLPAQSVEPNPLCSFDLEQQPVMQAYVPDISQPVSMQSFTNPMQSSETVSNSSTSSQLQSPAQIPSINQQYPSQAHPQSITMTGIVSSQQQLSLVVESDVEGPRKIEFTDNTIKTLDEKLRTLLYQEPGGILPVHPAADSADAAAAECMGCTEELYAEPLGEVHDATLSVTVSVHDVKHIDAPIHSVLPITQVPNVGSLPSVTSPPENLLEETSNQCEALREVLYQHVKTPEIHIGRDSTLTGENGPSDNVAPTSQDTDNKIVYNAKNGTKPIKDPPKIHLLSTSSANSESDQKTDKLSIRRINTIGRFSVISTKDEVTLKYPGLNRYSAPPELYPMESPTSPDVKPLVKQAQSPVPMEVKLWSQVSSDSDEPFNVKPKVVQKLLICNQTTTDGEFSLSGKLAALLKSDDKQVPEHVIGQTPPTISIHSPSPSHSSYMSSDNDSEFEDSDMKKELQTLREKHMKEISELQVHQRHEIQELYSRLGKPLPTALGFLQAVPPTSRRRRTSKNKLKAGRLLNPLVQSLKNAASNTSLSSNTNIQTNSCIASKHQDASCSSDTLEATQSEAVQTQQPGSIKSSLSSDDYQGFINEGAGAAQGDAAQGWTVFHQTSERVTYKSNSKPRTRFLSGPVSLSIWSTLKRLCLGKDRSRSSSSSSTSHSVQRVLNQHQSQPQQEQSPPQPSQTNNSNNKKGTFTDDLHKLVDDWTKETVGAAQFKPSLNQLKQNQHRFDVGVRQKLSQPDGRSAAGKMRKCSAPVTCPAAAALGPGNSTIPAGVSAAPIPGPLPAYVLPLCQYGGVIPTTIYGVHWQGLSSSALQPGLLNTQGISSFPSL…
SIO_010081: wnk2
subclass of: SO_0000673
so part of: wnk2
location: complement(join(107766..108119,110989..111263,111616..111657,125174..125272,134698..134889,138286..138518,140260..140891,146643..147829,148324..148443,154254..154287,155446..155604,155713..155829,155920..156085,157931..157989,170170..170337,173448..173486,173582..173704,176315..176511,185280..185556,189691..189910,195625..195713,206722..206879,209465..209685,212750..212922,257402..258151))
location: region:107766-258151:-1
so has part: feature:257402-258151:-1:exon
so has part: feature:212750-212922:-1:exon
so has part: feature:209465-209685:-1:exon
so has part: feature:206722-206879:-1:exon
so has part: feature:195625-195713:-1:exon
so has part: feature:189691-189910:-1:exon
so has part: feature:185280-185556:-1:exon
so has part: feature:176315-176511:-1:exon
so has part: feature:173582-173704:-1:exon
so has part: feature:173448-173486:-1:exon
so has part: feature:170170-170337:-1:exon
so has part: feature:157931-157989:-1:exon
so has part: feature:155920-156085:-1:exon
so has part: feature:155713-155829:-1:exon
so has part: feature:155446-155604:-1:exon
so has part: feature:154254-154287:-1:exon
so has part: feature:148324-148443:-1:exon
so has part: feature:146643-147829:-1:exon
so has part: feature:140260-140891:-1:exon
so has part: feature:138286-138518:-1:exon
so has part: feature:134698-134889:-1:exon
so has part: feature:125174-125272:-1:exon
so has part: feature:111616-111657:-1:exon
so has part: feature:110989-111263:-1:exon
so has part: feature:107766-108119:-1:exon

XP_032892412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257402-258151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212750-212922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209465-209685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206722-206879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195625-195713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189691-189910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185280-185556:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176315-176511:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:173582-173704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173448-173486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:170170-170337:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157931-157989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:155920-156085:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:155713-155829:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:155446-155604:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:154254-154287:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:148324-148443:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:146643-147829:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:140260-140891:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:138286-138518:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:134698-134889:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:125174-125272:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:111616-111657:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:110989-111263:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:107766-108119:-1:exon

LOC116983593
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116983593
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 237967..238158
location: region:237967-238158:1
so has part: feature:237967-238158:1:exon
subclass of: SO_0000623

116983593
type: Gene
SIO_000068: ncbigene

position:237967:1
position: 237967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238158:1
position: 238158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237967-238158:1:exon

LOC116983593
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snRNA
gene: LOC116983593
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004414748.1
SIO_010081: LOC116983593
subclass of: SO_0000673
so part of: LOC116983593
location: 237967..238158
location: region:237967-238158:1
so has part: feature:237967-238158:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237967-238158:1:exon

ninj1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ninj1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 279724..310433
location: region:279724-310433:1
so has part: feature:279724-310433:1:exon
subclass of: SO_0000010

116983018
type: Gene
SIO_000068: ncbigene

position:279724:1
position: 279724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310433:1
position: 310433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279724-310433:1:exon

ninj1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ninj1
product: ninjurin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033036530.1
SIO_010081: ninj1
subclass of: SO_0000673
so part of: ninj1
location: join(279724..279850,297983..298208,303222..303397,308539..310433)
location: region:279724-310433:1
so has part: feature:279724-279850:1:exon
so has part: feature:297983-298208:1:exon
so has part: feature:303222-303397:1:exon
so has part: feature:308539-310433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279724-279850:1:exon

position:279850:1
position: 279850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297983-298208:1:exon

position:297983:1
position: 297983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298208:1
position: 298208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:303222-303397:1:exon

position:303222:1
position: 303222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303397:1
position: 303397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:308539-310433:1:exon

position:308539:1
position: 308539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ninj1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ninj1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ninjurin-1
translation: MEPENMELNGSLSGTEHRRSRGTQSINFNHYANKKSAAESMLDVALLMANASQLKAVIDQGSNFNYYVALVILISISLIFQVVVGILLIFIVKYDLNDPNKQSRLNHLNNLATGMVFLIVIVNIFITAFGVQRPPPHHTNPQSF
SIO_010081: ninj1
subclass of: SO_0000673
so part of: ninj1
location: join(279803..279850,297983..298208,303222..303382)
location: region:279803-303382:1
so has part: feature:279803-279850:1:exon
so has part: feature:297983-298208:1:exon
so has part: feature:303222-303382:1:exon

XP_032892421.1
type: Protein
SIO_000068: ncbiprotein

position:279803:1
position: 279803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303382:1
position: 303382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279803-279850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297983-298208:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:303222-303382:1:exon

LOC116983020
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116983020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 345011..345461
location: region:345011-345461:1
so has part: feature:345011-345461:1:exon
subclass of: SO_0000011

116983020
type: Gene
SIO_000068: ncbigene

position:345011:1
position: 345011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345461:1
position: 345461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345011-345461:1:exon

LOC116983020
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116983020
product: uncharacterized LOC116983020
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004414597.1
SIO_010081: LOC116983020
subclass of: SO_0000673
so part of: LOC116983020
location: join(345011..345095,345165..345210,345257..345461)
location: region:345011-345461:1
so has part: feature:345011-345095:1:exon
so has part: feature:345165-345210:1:exon
so has part: feature:345257-345461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:345011-345095:1:exon

position:345095:1
position: 345095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:345165-345210:1:exon

position:345165:1
position: 345165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345210:1
position: 345210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:345257-345461:1:exon

position:345257:1
position: 345257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

card19
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: card19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(345683..362034)
location: region:345683-362034:-1
so has part: feature:345683-362034:-1:exon
subclass of: SO_0000010

116983019
type: Gene
SIO_000068: ncbigene

position:345683:-1
position: 345683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362034:-1
position: 362034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345683-362034:-1:exon

card19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: card19
product: caspase recruitment domain family member 19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_033036531.1
SIO_010081: card19
subclass of: SO_0000673
so part of: card19
location: complement(join(345683..346491,347002..347073,354301..354369,356263..356416,360365..360501,361965..362034))
location: region:345683-362034:-1
so has part: feature:361965-362034:-1:exon
so has part: feature:360365-360501:-1:exon
so has part: feature:356263-356416:-1:exon
so has part: feature:354301-354369:-1:exon
so has part: feature:347002-347073:-1:exon
so has part: feature:345683-346491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361965-362034:-1:exon

position:361965:-1
position: 361965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360365-360501:-1:exon

position:360365:-1
position: 360365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360501:-1
position: 360501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:356263-356416:-1:exon

position:356263:-1
position: 356263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356416:-1
position: 356416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:354301-354369:-1:exon

position:354301:-1
position: 354301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354369:-1
position: 354369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:347002-347073:-1:exon

position:347002:-1
position: 347002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347073:-1
position: 347073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:345683-346491:-1:exon

position:346491:-1
position: 346491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

card19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: card19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase recruitment domain-containing protein 19
translation: MADHCRRLDMDREFLSREDALSERLMDRIVLHLFRIYPQILNNSEAEAFRSLNAPVHIRISDLLQHLQSQSNKACKEFYNALELNDPQIYKQLPSKHPGETTRSVATNMDIYHRERYILNNRGPVFFLACFSVAAGLSIVLYYCKEETKFESVAKKIVGFSSLGFGRRARRFFLAYLEARS
SIO_010081: card19
subclass of: SO_0000673
so part of: card19
location: complement(join(346385..346491,347002..347073,354301..354369,356263..356416,360365..360501,361965..361971))
location: region:346385-361971:-1
so has part: feature:361965-361971:-1:exon
so has part: feature:360365-360501:-1:exon
so has part: feature:356263-356416:-1:exon
so has part: feature:354301-354369:-1:exon
so has part: feature:347002-347073:-1:exon
so has part: feature:346385-346491:-1:exon

XP_032892422.1
type: Protein
SIO_000068: ncbiprotein

position:346385:-1
position: 346385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361971:-1
position: 361971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361965-361971:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360365-360501:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:356263-356416:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354301-354369:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:347002-347073:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346385-346491:-1:exon

susd3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: susd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(367490..380784)
location: region:367490-380784:-1
so has part: feature:367490-380784:-1:exon
subclass of: SO_0000010

116983021
type: Gene
SIO_000068: ncbigene

position:367490:-1
position: 367490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380784:-1
position: 380784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367490-380784:-1:exon

susd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: susd3
product: sushi domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033036532.1
SIO_010081: susd3
subclass of: SO_0000673
so part of: susd3
location: complement(join(367490..367845,369266..369424,373484..373631,380594..380784))
location: region:367490-380784:-1
so has part: feature:380594-380784:-1:exon
so has part: feature:373484-373631:-1:exon
so has part: feature:369266-369424:-1:exon
so has part: feature:367490-367845:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380594-380784:-1:exon

position:380594:-1
position: 380594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373484-373631:-1:exon

position:373484:-1
position: 373484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373631:-1
position: 373631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:369266-369424:-1:exon

position:369266:-1
position: 369266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369424:-1
position: 369424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:367490-367845:-1:exon

position:367845:-1
position: 367845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

susd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: susd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi domain-containing protein 3
translation: MQTTAAPRGNNSGVGIREAANNHRAALRYGDVGFRTAVIVSIISTAVILLMSMVFLTSCLVKCVRKKERRKHQRDLQTWCQIECNVLDESRGFCQGYKGRNNNNNKLQDNILIEEIDSGLDNNRFFRSPGKMTLEAPLHCGVKASHLTFHPWNVDFSTSTDSGILLSSVTEEHIVEIAVGDTSELSTVRHLT
SIO_010081: susd3
subclass of: SO_0000673
so part of: susd3
location: complement(join(367647..367845,369266..369424,373484..373631,380594..380666))
location: region:367647-380666:-1
so has part: feature:380594-380666:-1:exon
so has part: feature:373484-373631:-1:exon
so has part: feature:369266-369424:-1:exon
so has part: feature:367647-367845:-1:exon

XP_032892423.1
type: Protein
SIO_000068: ncbiprotein

position:367647:-1
position: 367647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380666:-1
position: 380666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380594-380666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373484-373631:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:369266-369424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:367647-367845:-1:exon

fgd3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: fgd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(393730..514890)
location: region:393730-514890:-1
so has part: feature:393730-514890:-1:exon
subclass of: SO_0000010

116983022
type: Gene
SIO_000068: ncbigene

position:393730:-1
position: 393730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514890:-1
position: 514890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393730-514890:-1:exon

fgd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fgd3
product: FYVE, RhoGEF and PH domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033036533.1
SIO_010081: fgd3
subclass of: SO_0000673
so part of: fgd3
location: complement(join(393730..394616,395474..395614,398548..398700,398827..398949,409687..409743,411458..411562,411661..411691,411875..411954,412265..412357,413337..413483,417546..417604,420923..421061,422843..422999,424625..424761,426007..426096,442737..443328,443823..444012,448758..448913,514754..514890))
location: region:393730-514890:-1
so has part: feature:514754-514890:-1:exon
so has part: feature:448758-448913:-1:exon
so has part: feature:443823-444012:-1:exon
so has part: feature:442737-443328:-1:exon
so has part: feature:426007-426096:-1:exon
so has part: feature:424625-424761:-1:exon
so has part: feature:422843-422999:-1:exon
so has part: feature:420923-421061:-1:exon
so has part: feature:417546-417604:-1:exon
so has part: feature:413337-413483:-1:exon
so has part: feature:412265-412357:-1:exon
so has part: feature:411875-411954:-1:exon
so has part: feature:411661-411691:-1:exon
so has part: feature:411458-411562:-1:exon
so has part: feature:409687-409743:-1:exon
so has part: feature:398827-398949:-1:exon
so has part: feature:398548-398700:-1:exon
so has part: feature:395474-395614:-1:exon
so has part: feature:393730-394616:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:514754-514890:-1:exon

position:514754:-1
position: 514754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:448758-448913:-1:exon

position:448758:-1
position: 448758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448913:-1
position: 448913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:443823-444012:-1:exon

position:443823:-1
position: 443823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444012:-1
position: 444012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:442737-443328:-1:exon

position:442737:-1
position: 442737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443328:-1
position: 443328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:426007-426096:-1:exon

position:426007:-1
position: 426007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426096:-1
position: 426096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:424625-424761:-1:exon

position:424625:-1
position: 424625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424761:-1
position: 424761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:422843-422999:-1:exon

position:422843:-1
position: 422843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422999:-1
position: 422999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:420923-421061:-1:exon

position:420923:-1
position: 420923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421061:-1
position: 421061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:417546-417604:-1:exon

position:417546:-1
position: 417546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417604:-1
position: 417604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:413337-413483:-1:exon

position:413337:-1
position: 413337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413483:-1
position: 413483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:412265-412357:-1:exon

position:412265:-1
position: 412265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412357:-1
position: 412357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:411875-411954:-1:exon

position:411875:-1
position: 411875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411954:-1
position: 411954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:411661-411691:-1:exon

position:411661:-1
position: 411661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411691:-1
position: 411691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:411458-411562:-1:exon

position:411458:-1
position: 411458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411562:-1
position: 411562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:409687-409743:-1:exon

position:409687:-1
position: 409687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409743:-1
position: 409743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:398827-398949:-1:exon

position:398827:-1
position: 398827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398949:-1
position: 398949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:398548-398700:-1:exon

position:398548:-1
position: 398548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398700:-1
position: 398700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:395474-395614:-1:exon

position:395474:-1
position: 395474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395614:-1
position: 395614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:393730-394616:-1:exon

position:394616:-1
position: 394616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

fgd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fgd3
product: FYVE, RhoGEF and PH domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033036534.1
SIO_010081: fgd3
subclass of: SO_0000673
so part of: fgd3
location: complement(join(393730..394616,395474..395614,398548..398700,398827..398949,409687..409743,411458..411562,411661..411691,411875..411954,412265..412357,413337..413483,417546..417604,420923..421061,422843..422999,424625..424761,426007..426096,442737..443328,443823..444012,448758..448913,489021..489048))
location: region:393730-489048:-1
so has part: feature:489021-489048:-1:exon
so has part: feature:448758-448913:-1:exon
so has part: feature:443823-444012:-1:exon
so has part: feature:442737-443328:-1:exon
so has part: feature:426007-426096:-1:exon
so has part: feature:424625-424761:-1:exon
so has part: feature:422843-422999:-1:exon
so has part: feature:420923-421061:-1:exon
so has part: feature:417546-417604:-1:exon
so has part: feature:413337-413483:-1:exon
so has part: feature:412265-412357:-1:exon
so has part: feature:411875-411954:-1:exon
so has part: feature:411661-411691:-1:exon
so has part: feature:411458-411562:-1:exon
so has part: feature:409687-409743:-1:exon
so has part: feature:398827-398949:-1:exon
so has part: feature:398548-398700:-1:exon
so has part: feature:395474-395614:-1:exon
so has part: feature:393730-394616:-1:exon

position:489048:-1
position: 489048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489021-489048:-1:exon

position:489021:-1
position: 489021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:448758-448913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443823-444012:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442737-443328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426007-426096:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424625-424761:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422843-422999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420923-421061:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:417546-417604:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:413337-413483:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:412265-412357:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:411875-411954:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:411661-411691:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:411458-411562:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:409687-409743:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:398827-398949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:398548-398700:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:395474-395614:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:393730-394616:-1:exon

fgd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fgd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 3 isoform X1
translation: MQPGSGAGTGESESPNPGAGYRGPPPLTRADSLPSSGQRPPLGSEPCLQQTARTLANRSPSATRVTAPKPQVPPKPVHLQTLRQEEVLQRIPPAPSRPLPADPKKSKSSLAKSVSTDGANLPRVSSLIEQFESVRQLSPETSKRTQLVLSLKMEELQDPCECVASGSGLESVTQVDITTDKLDNNGTEDSMDLVDRTNQEVAAMQELAQGDVSDDNCTGLRTQEARAPVEIGESTLEQNGNGKIPNRDSGIDSPSCNGDNEVFPNEETMEEKRNAGSVETETENEMEVKPAEASEMQQKIDCAQEDDDSDMDDGSSEENEPAEVSKTEETAKCTEPQKLFNIANELLHTEEAYVKRLHLLDQVFCTKLTEAGIPPDVITGIFSNISSIYCFHDQFLLPELKSRIKKEWDKNPRLGDILQKLAPFLKMYGEYVKNFDRAMDLVNSWMQRSSQFKSIIQDIQKQDVCGNLTLQHHMLEPVQRIPRYEMLLKDYLKKLPEDSLDRKDAEKSLELISTAANHSNVAIRKMEKMNKLLEVYERLGGEADIVNPANELIKEGHIQKLSAKNGSAQDRYLFLFNNMILYCVPKLRLMGQKFSVRERIDIAGMQVQEKVKSTVTHTFTIVGKQRSLELQARTEEERKDWFQVIHGTIEKHKQNSETFNKAFNSSFSRDEESAPDSPVPGAACGESNVGDFSSPSLMDSGKRASKTKRDKEKQTCKSCSETFNSITKRRHHCKQCNAIICGKCSEFKPLADSRHNRVCKDCFTLPVTAQPPIPAPDNVTEQKRKSVLERPTSLTSDNTVFCSNLSFMEKGKPWHKVWVAIPKSDPMVLYLHIGIQEGKQSRTIPLPGYEIEQLIPGDVMERKHTFKLRQSQQTFYFSADDEELQKKWIDVISKVAKGQVEEDPSNSVE
SIO_010081: fgd3
subclass of: SO_0000673
so part of: fgd3
location: complement(join(394395..394616,395474..395614,398548..398700,398827..398949,409687..409743,411458..411562,411661..411691,411875..411954,412265..412357,413337..413483,417546..417604,420923..421061,422843..422999,424625..424761,426007..426096,442737..443328,443823..444012,448758..448913,514754..514811))
location: region:394395-514811:-1
so has part: feature:514754-514811:-1:exon
so has part: feature:448758-448913:-1:exon
so has part: feature:443823-444012:-1:exon
so has part: feature:442737-443328:-1:exon
so has part: feature:426007-426096:-1:exon
so has part: feature:424625-424761:-1:exon
so has part: feature:422843-422999:-1:exon
so has part: feature:420923-421061:-1:exon
so has part: feature:417546-417604:-1:exon
so has part: feature:413337-413483:-1:exon
so has part: feature:412265-412357:-1:exon
so has part: feature:411875-411954:-1:exon
so has part: feature:411661-411691:-1:exon
so has part: feature:411458-411562:-1:exon
so has part: feature:409687-409743:-1:exon
so has part: feature:398827-398949:-1:exon
so has part: feature:398548-398700:-1:exon
so has part: feature:395474-395614:-1:exon
so has part: feature:394395-394616:-1:exon

XP_032892424.1
type: Protein
SIO_000068: ncbiprotein

position:394395:-1
position: 394395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514811:-1
position: 514811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514754-514811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448758-448913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443823-444012:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442737-443328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426007-426096:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424625-424761:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422843-422999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420923-421061:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:417546-417604:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:413337-413483:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:412265-412357:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:411875-411954:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:411661-411691:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:411458-411562:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:409687-409743:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:398827-398949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:398548-398700:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:395474-395614:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:394395-394616:-1:exon

fgd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fgd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 3 isoform X2
translation: MQQAGYRGPPPLTRADSLPSSGQRPPLGSEPCLQQTARTLANRSPSATRVTAPKPQVPPKPVHLQTLRQEEVLQRIPPAPSRPLPADPKKSKSSLAKSVSTDGANLPRVSSLIEQFESVRQLSPETSKRTQLVLSLKMEELQDPCECVASGSGLESVTQVDITTDKLDNNGTEDSMDLVDRTNQEVAAMQELAQGDVSDDNCTGLRTQEARAPVEIGESTLEQNGNGKIPNRDSGIDSPSCNGDNEVFPNEETMEEKRNAGSVETETENEMEVKPAEASEMQQKIDCAQEDDDSDMDDGSSEENEPAEVSKTEETAKCTEPQKLFNIANELLHTEEAYVKRLHLLDQVFCTKLTEAGIPPDVITGIFSNISSIYCFHDQFLLPELKSRIKKEWDKNPRLGDILQKLAPFLKMYGEYVKNFDRAMDLVNSWMQRSSQFKSIIQDIQKQDVCGNLTLQHHMLEPVQRIPRYEMLLKDYLKKLPEDSLDRKDAEKSLELISTAANHSNVAIRKMEKMNKLLEVYERLGGEADIVNPANELIKEGHIQKLSAKNGSAQDRYLFLFNNMILYCVPKLRLMGQKFSVRERIDIAGMQVQEKVKSTVTHTFTIVGKQRSLELQARTEEERKDWFQVIHGTIEKHKQNSETFNKAFNSSFSRDEESAPDSPVPGAACGESNVGDFSSPSLMDSGKRASKTKRDKEKQTCKSCSETFNSITKRRHHCKQCNAIICGKCSEFKPLADSRHNRVCKDCFTLPVTAQPPIPAPDNVTEQKRKSVLERPTSLTSDNTVFCSNLSFMEKGKPWHKVWVAIPKSDPMVLYLHIGIQEGKQSRTIPLPGYEIEQLIPGDVMERKHTFKLRQSQQTFYFSADDEELQKKWIDVISKVAKGQVEEDPSNSVE
SIO_010081: fgd3
subclass of: SO_0000673
so part of: fgd3
location: complement(join(394395..394616,395474..395614,398548..398700,398827..398949,409687..409743,411458..411562,411661..411691,411875..411954,412265..412357,413337..413483,417546..417604,420923..421061,422843..422999,424625..424761,426007..426096,442737..443328,443823..444012,448758..448913,489021..489033))
location: region:394395-489033:-1
so has part: feature:489021-489033:-1:exon
so has part: feature:448758-448913:-1:exon
so has part: feature:443823-444012:-1:exon
so has part: feature:442737-443328:-1:exon
so has part: feature:426007-426096:-1:exon
so has part: feature:424625-424761:-1:exon
so has part: feature:422843-422999:-1:exon
so has part: feature:420923-421061:-1:exon
so has part: feature:417546-417604:-1:exon
so has part: feature:413337-413483:-1:exon
so has part: feature:412265-412357:-1:exon
so has part: feature:411875-411954:-1:exon
so has part: feature:411661-411691:-1:exon
so has part: feature:411458-411562:-1:exon
so has part: feature:409687-409743:-1:exon
so has part: feature:398827-398949:-1:exon
so has part: feature:398548-398700:-1:exon
so has part: feature:395474-395614:-1:exon
so has part: feature:394395-394616:-1:exon

XP_032892425.1
type: Protein
SIO_000068: ncbiprotein

position:489033:-1
position: 489033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489021-489033:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448758-448913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443823-444012:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442737-443328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426007-426096:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424625-424761:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422843-422999:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420923-421061:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:417546-417604:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:413337-413483:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:412265-412357:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:411875-411954:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:411661-411691:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:411458-411562:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:409687-409743:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:398827-398949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:398548-398700:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:395474-395614:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:394395-394616:-1:exon

LOC116983024
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116983024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 513062..547114
location: region:513062-547114:1
so has part: feature:513062-547114:1:exon
subclass of: SO_0000011

116983024
type: Gene
SIO_000068: ncbigene

position:513062:1
position: 513062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547114:1
position: 547114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513062-547114:1:exon

LOC116983024
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116983024
product: uncharacterized LOC116983024
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004414598.1
SIO_010081: LOC116983024
subclass of: SO_0000673
so part of: LOC116983024
location: join(513062..513078,531538..531652,547102..547114)
location: region:513062-547114:1
so has part: feature:513062-513078:1:exon
so has part: feature:531538-531652:1:exon
so has part: feature:547102-547114:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513062-513078:1:exon

position:513078:1
position: 513078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:531538-531652:1:exon

position:531538:1
position: 531538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531652:1
position: 531652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:547102-547114:1:exon

position:547102:1
position: 547102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

bicd2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: bicd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(536310..583029)
location: region:536310-583029:-1
so has part: feature:536310-583029:-1:exon
subclass of: SO_0000010

116983023
type: Gene
SIO_000068: ncbigene

position:536310:-1
position: 536310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583029:-1
position: 583029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536310-583029:-1:exon

bicd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: bicd2
product: BICD cargo adaptor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033036537.1
SIO_010081: bicd2
subclass of: SO_0000673
so part of: bicd2
location: complement(join(536310..538180,540816..541026,551718..551869,552227..553258,553619..554065,555207..555359,560951..561163,582554..583029))
location: region:536310-583029:-1
so has part: feature:582554-583029:-1:exon
so has part: feature:560951-561163:-1:exon
so has part: feature:555207-555359:-1:exon
so has part: feature:553619-554065:-1:exon
so has part: feature:552227-553258:-1:exon
so has part: feature:551718-551869:-1:exon
so has part: feature:540816-541026:-1:exon
so has part: feature:536310-538180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:582554-583029:-1:exon

position:582554:-1
position: 582554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:560951-561163:-1:exon

position:560951:-1
position: 560951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561163:-1
position: 561163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:555207-555359:-1:exon

position:555207:-1
position: 555207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555359:-1
position: 555359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:553619-554065:-1:exon

position:553619:-1
position: 553619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554065:-1
position: 554065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:552227-553258:-1:exon

position:552227:-1
position: 552227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553258:-1
position: 553258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:551718-551869:-1:exon

position:551718:-1
position: 551718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551869:-1
position: 551869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:540816-541026:-1:exon

position:540816:-1
position: 540816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541026:-1
position: 541026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:536310-538180:-1:exon

position:538180:-1
position: 538180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

bicd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: bicd2
product: BICD cargo adaptor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_033036535.1
SIO_010081: bicd2
subclass of: SO_0000673
so part of: bicd2
location: complement(join(536310..541026,551718..551869,552227..553258,553619..554065,555207..555359,560951..561163,582554..583029))
location: region:536310-583029:-1
so has part: feature:582554-583029:-1:exon
so has part: feature:560951-561163:-1:exon
so has part: feature:555207-555359:-1:exon
so has part: feature:553619-554065:-1:exon
so has part: feature:552227-553258:-1:exon
so has part: feature:551718-551869:-1:exon
so has part: feature:536310-541026:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:582554-583029:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:560951-561163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555207-555359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553619-554065:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552227-553258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551718-551869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536310-541026:-1:exon

bicd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: bicd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 2 isoform X2
translation: MEGEQQQLRTEVERLNRELSETTEEKMQAAEYGLVVLEEKQTLKLQYDELETEYETARQELEQLREAFGQAYSNQKKVAADGESREESLIQESASKEAYYVAKILELQTDLKQMKNVLTNAQSENDHLASITQQLKESNQVVELQRNRLRDDIKEYKFRETRLLQDYSELEEENISLQKQVSVLKQNQVEFESLKHEIKRLEEETEFLNSQLEDAIRLKEIAERQLEESLETLKNEREQKNNMRKELSHYMNISDSMYTSQLSISLDGLKFSDDCNEPNNDELINGFENGLTKLNGDNKLSTPKKNDHFKPAPSLVSDLLSELNLSEMQKLKQQLMQVERDKTTLLATLQESQKQLEHTRGALSEQNEKVNRLTEHVSAMKKLQASKERQSALDNEKERDSHEDGDYYEVDINGPEILECKYKVAIADVNELKEELKNLKATYSDNENKYEKEKTRNESEIQSMTEKLELLEKTNKEEQEQIICLEKELKKVSEVAEGTQGSLTVAQDELVTFSEELANLYNHVCICNNETPNRVILDYFKEGKNVRSCSEGKERRSPVLLTKGLFPGEMGKVENNNNGDIVPASASSLPSPVSCASDPRKEPMNIYNLIAVIRDQIKHLQKAVDRSTELSKQRAASHELGAMADKDKEVFMEEILKLRSLLSTKREQISTLRAVLKANKQTAEMALSNLKSKYEMEKSMVTETIMKLRNELKALKEDAATFSSLRAMFATRCDEYVNQLDEMQRQLAAADDEKKTLNSLLRMAIQQKLALTQRLEDLEFDHEQTKRGRTKSWTKTRASNPS
SIO_010081: bicd2
subclass of: SO_0000673
so part of: bicd2
location: complement(join(538178..538180,540816..541026,551718..551869,552227..553258,553619..554065,555207..555359,560951..561163,582554..582751))
location: region:538178-582751:-1
so has part: feature:582554-582751:-1:exon
so has part: feature:560951-561163:-1:exon
so has part: feature:555207-555359:-1:exon
so has part: feature:553619-554065:-1:exon
so has part: feature:552227-553258:-1:exon
so has part: feature:551718-551869:-1:exon
so has part: feature:540816-541026:-1:exon
so has part: feature:538178-538180:-1:exon

XP_032892428.1
type: Protein
SIO_000068: ncbiprotein

position:538178:-1
position: 538178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582751:-1
position: 582751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582554-582751:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:560951-561163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555207-555359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553619-554065:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552227-553258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551718-551869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540816-541026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:538178-538180:-1:exon

bicd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: bicd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 2 isoform X1
translation: MEGEQQQLRTEVERLNRELSETTEEKMQAAEYGLVVLEEKQTLKLQYDELETEYETARQELEQLREAFGQAYSNQKKVAADGESREESLIQESASKEAYYVAKILELQTDLKQMKNVLTNAQSENDHLASITQQLKESNQVVELQRNRLRDDIKEYKFRETRLLQDYSELEEENISLQKQVSVLKQNQVEFESLKHEIKRLEEETEFLNSQLEDAIRLKEIAERQLEESLETLKNEREQKNNMRKELSHYMNISDSMYTSQLSISLDGLKFSDDCNEPNNDELINGFENGLTKLNGDNKLSTPKKNDHFKPAPSLVSDLLSELNLSEMQKLKQQLMQVERDKTTLLATLQESQKQLEHTRGALSEQNEKVNRLTEHVSAMKKLQASKERQSALDNEKERDSHEDGDYYEVDINGPEILECKYKVAIADVNELKEELKNLKATYSDNENKYEKEKTRNESEIQSMTEKLELLEKTNKEEQEQIICLEKELKKVSEVAEGTQGSLTVAQDELVTFSEELANLYNHVCICNNETPNRVILDYFKEGKNVRSCSEGKERRSPVLLTKGLFPGEMGKVENNNNGDIVPASASSLPSPVSCASDPRKEPMNIYNLIAVIRDQIKHLQKAVDRSTELSKQRAASHELGAMADKDKEVFMEEILKLRSLLSTKREQISTLRAVLKANKQTAEMALSNLKSKYEMEKSMVTETIMKLRNELKALKEDAATFSSLRAMFATRCDEYVNQLDEMQRQLAAADDEKKTLNSLLRMAIQQKLALTQRLEDLEFDHEQTKRGRTKSWTKTRASNPSVSHMRSRVVKQEGVSVGNQVYCSEKYKIYCD
SIO_010081: bicd2
subclass of: SO_0000673
so part of: bicd2
location: complement(join(540720..541026,551718..551869,552227..553258,553619..554065,555207..555359,560951..561163,582554..582751))
location: region:540720-582751:-1
so has part: feature:582554-582751:-1:exon
so has part: feature:560951-561163:-1:exon
so has part: feature:555207-555359:-1:exon
so has part: feature:553619-554065:-1:exon
so has part: feature:552227-553258:-1:exon
so has part: feature:551718-551869:-1:exon
so has part: feature:540720-541026:-1:exon

XP_032892426.1
type: Protein
SIO_000068: ncbiprotein

position:540720:-1
position: 540720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582554-582751:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:560951-561163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555207-555359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553619-554065:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552227-553258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551718-551869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540720-541026:-1:exon

bicd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: bicd2
product: BICD cargo adaptor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033036538.1
SIO_010081: bicd2
subclass of: SO_0000673
so part of: bicd2
location: complement(join(540884..541026,544921..544948,551718..551869,552227..553258,553619..554065,555207..555359,560951..561163,582554..583029))
location: region:540884-583029:-1
so has part: feature:582554-583029:-1:exon
so has part: feature:560951-561163:-1:exon
so has part: feature:555207-555359:-1:exon
so has part: feature:553619-554065:-1:exon
so has part: feature:552227-553258:-1:exon
so has part: feature:551718-551869:-1:exon
so has part: feature:544921-544948:-1:exon
so has part: feature:540884-541026:-1:exon

position:540884:-1
position: 540884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582554-583029:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:560951-561163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555207-555359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553619-554065:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552227-553258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551718-551869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544921-544948:-1:exon

position:544921:-1
position: 544921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544948:-1
position: 544948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:540884-541026:-1:exon

bicd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: bicd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 2 isoform X3
translation: MEGEQQQLRTEVERLNRELSETTEEKMQAAEYGLVVLEEKQTLKLQYDELETEYETARQELEQLREAFGQAYSNQKKVAADGESREESLIQESASKEAYYVAKILELQTDLKQMKNVLTNAQSENDHLASITQQLKESNQVVELQRNRLRDDIKEYKFRETRLLQDYSELEEENISLQKQVSVLKQNQVEFESLKHEIKRLEEETEFLNSQLEDAIRLKEIAERQLEESLETLKNEREQKNNMRKELSHYMNISDSMYTSQLSISLDGLKFSDDCNEPNNDELINGFENGLTKLNGDNKLSTPKKNDHFKPAPSLVSDLLSELNLSEMQKLKQQLMQVERDKTTLLATLQESQKQLEHTRGALSEQNEKVNRLTEHVSAMKKLQASKERQSALDNEKERDSHEDGDYYEVDINGPEILECKYKVAIADVNELKEELKNLKATYSDNENKYEKEKTRNESEIQSMTEKLELLEKTNKEEQEQIICLEKELKKVSEVAEGTQGSLTVAQDELVTFSEELANLYNHVCICNNETPNRVILDYFKEGKNVRSCSEGKERRSPVLLTKGLFPGEMGKVENNNNGDIVPASASSLPSPVSCASDPRKEPMNIYNLIAVIRDQIKHLQKAVDRSTELSKQRAASHELGAMADKDKEVFMEEILKLRSLLSTKREQISTLRAVLKANKQTAEMALSNLKSKYEMEKSMVTETIMKLRNELKALKEDAATFSSLRAMFATRLLNSTKIDQVR
SIO_010081: bicd2
subclass of: SO_0000673
so part of: bicd2
location: complement(join(541018..541026,544921..544948,551718..551869,552227..553258,553619..554065,555207..555359,560951..561163,582554..582751))
location: region:541018-582751:-1
so has part: feature:582554-582751:-1:exon
so has part: feature:560951-561163:-1:exon
so has part: feature:555207-555359:-1:exon
so has part: feature:553619-554065:-1:exon
so has part: feature:552227-553258:-1:exon
so has part: feature:551718-551869:-1:exon
so has part: feature:544921-544948:-1:exon
so has part: feature:541018-541026:-1:exon

XP_032892429.1
type: Protein
SIO_000068: ncbiprotein

position:541018:-1
position: 541018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582554-582751:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:560951-561163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555207-555359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553619-554065:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552227-553258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551718-551869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544921-544948:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541018-541026:-1:exon

tkt
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tkt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(625128..646120)
location: region:625128-646120:-1
so has part: feature:625128-646120:-1:exon
subclass of: SO_0000010

116983025
type: Gene
SIO_000068: ncbigene

position:625128:-1
position: 625128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646120:-1
position: 646120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625128-646120:-1:exon

tkt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tkt
product: transketolase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 38 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033036539.1
SIO_010081: tkt
subclass of: SO_0000673
so part of: tkt
location: complement(join(625128..626438,627669..627791,628910..629006,630532..630615,632457..632587,632814..632970,633846..634010,635511..635704,636712..636839,638354..638545,641106..641203,641443..641556,642057..642174,645908..646120))
location: region:625128-646120:-1
so has part: feature:645908-646120:-1:exon
so has part: feature:642057-642174:-1:exon
so has part: feature:641443-641556:-1:exon
so has part: feature:641106-641203:-1:exon
so has part: feature:638354-638545:-1:exon
so has part: feature:636712-636839:-1:exon
so has part: feature:635511-635704:-1:exon
so has part: feature:633846-634010:-1:exon
so has part: feature:632814-632970:-1:exon
so has part: feature:632457-632587:-1:exon
so has part: feature:630532-630615:-1:exon
so has part: feature:628910-629006:-1:exon
so has part: feature:627669-627791:-1:exon
so has part: feature:625128-626438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:645908-646120:-1:exon

position:645908:-1
position: 645908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:642057-642174:-1:exon

position:642057:-1
position: 642057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642174:-1
position: 642174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:641443-641556:-1:exon

position:641443:-1
position: 641443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641556:-1
position: 641556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:641106-641203:-1:exon

position:641106:-1
position: 641106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641203:-1
position: 641203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:638354-638545:-1:exon

position:638354:-1
position: 638354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638545:-1
position: 638545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:636712-636839:-1:exon

position:636712:-1
position: 636712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636839:-1
position: 636839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:635511-635704:-1:exon

position:635511:-1
position: 635511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635704:-1
position: 635704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:633846-634010:-1:exon

position:633846:-1
position: 633846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634010:-1
position: 634010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:632814-632970:-1:exon

position:632814:-1
position: 632814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632970:-1
position: 632970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:632457-632587:-1:exon

position:632457:-1
position: 632457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632587:-1
position: 632587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:630532-630615:-1:exon

position:630532:-1
position: 630532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630615:-1
position: 630615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:628910-629006:-1:exon

position:628910:-1
position: 628910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629006:-1
position: 629006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:627669-627791:-1:exon

position:627669:-1
position: 627669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627791:-1
position: 627791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:625128-626438:-1:exon

position:626438:-1
position: 626438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tkt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tkt
product: transketolase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_033036540.1
SIO_010081: tkt
subclass of: SO_0000673
so part of: tkt
location: complement(join(625128..626438,627669..627791,628910..629006,630532..630615,632457..632587,632814..632970,633846..634010,635511..635704,636712..636839,638354..638545,641106..641203,641443..641556,642057..642174,643132..643173,645908..646091))
location: region:625128-646091:-1
so has part: feature:645908-646091:-1:exon
so has part: feature:643132-643173:-1:exon
so has part: feature:642057-642174:-1:exon
so has part: feature:641443-641556:-1:exon
so has part: feature:641106-641203:-1:exon
so has part: feature:638354-638545:-1:exon
so has part: feature:636712-636839:-1:exon
so has part: feature:635511-635704:-1:exon
so has part: feature:633846-634010:-1:exon
so has part: feature:632814-632970:-1:exon
so has part: feature:632457-632587:-1:exon
so has part: feature:630532-630615:-1:exon
so has part: feature:628910-629006:-1:exon
so has part: feature:627669-627791:-1:exon
so has part: feature:625128-626438:-1:exon

position:646091:-1
position: 646091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645908-646091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643132-643173:-1:exon

position:643132:-1
position: 643132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643173:-1
position: 643173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:642057-642174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641443-641556:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:641106-641203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638354-638545:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636712-636839:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:635511-635704:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:633846-634010:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632814-632970:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:632457-632587:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630532-630615:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:628910-629006:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:627669-627791:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:625128-626438:-1:exon

tkt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tkt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transketolase isoform X1
translation: MADMACYHRPDAATLQALRDMANTLRIHSITATTEAGSGHPTSCCSAAEIMSVLFFHNMKLKVQEPRNPNNDRFVLSKGHAAPILYAVWAELGFLCVGQLATLRKMDSLLEGHPVPKLEFVDVATGSLGQGLGAAAGMAYTGKHFDKASYRVYCLLGDGESSEGSVWEAMAFASHYKLDNLMAVLDVNRLGQSEPAPLQHKIDVYRKRCEAFGWHTEVVDGHSVEELCKAFWQAGMINGKPTMIIAKTFKGKGIEGVEDKENWHGKAIPKDEVEAVINSIKALITNEKKLAPSQPTEDAPPVCLQNIKLSAPPAYKHLEKVATRKAYGTALAKLGHDNKNVIALDCDTKNSTFSDMFKKAHPKRFIECYIAEQNMVSVAVGCCTRDRTVAFASTFATFFCRAFDQLRMAAISESNINLVGSHCGISIGEDGPSQMGLEDLALFRAIPTSTIFYPSDAVSTERAVELAANTKGICFIRTSRPETTIIYKNTEVFEVGKAKVLRKNNKDVLTVVAAGVTMREALAAAAELAEEGIYIRVIDPFTIKPIDDQTIISCTKCTKLKKIITVEDHYYEGGLGEAVTAAVALDPVIKVHRMAVSGVAFSATSAELMEKFEIDAKAIVKTVKELSEDQY
SIO_010081: tkt
subclass of: SO_0000673
so part of: tkt
location: complement(join(626260..626438,627669..627791,628910..629006,630532..630615,632457..632587,632814..632970,633846..634010,635511..635704,636712..636839,638354..638545,641106..641203,641443..641556,642057..642174,645908..646023))
location: region:626260-646023:-1
so has part: feature:645908-646023:-1:exon
so has part: feature:642057-642174:-1:exon
so has part: feature:641443-641556:-1:exon
so has part: feature:641106-641203:-1:exon
so has part: feature:638354-638545:-1:exon
so has part: feature:636712-636839:-1:exon
so has part: feature:635511-635704:-1:exon
so has part: feature:633846-634010:-1:exon
so has part: feature:632814-632970:-1:exon
so has part: feature:632457-632587:-1:exon
so has part: feature:630532-630615:-1:exon
so has part: feature:628910-629006:-1:exon
so has part: feature:627669-627791:-1:exon
so has part: feature:626260-626438:-1:exon

XP_032892430.1
type: Protein
SIO_000068: ncbiprotein

position:626260:-1
position: 626260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646023:-1
position: 646023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645908-646023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:642057-642174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641443-641556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641106-641203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638354-638545:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:636712-636839:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635511-635704:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:633846-634010:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:632814-632970:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632457-632587:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630532-630615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:628910-629006:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627669-627791:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:626260-626438:-1:exon

tkt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tkt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transketolase isoform X2
translation: MSVLFFHNMKLKVQEPRNPNNDRFVLSKGHAAPILYAVWAELGFLCVGQLATLRKMDSLLEGHPVPKLEFVDVATGSLGQGLGAAAGMAYTGKHFDKASYRVYCLLGDGESSEGSVWEAMAFASHYKLDNLMAVLDVNRLGQSEPAPLQHKIDVYRKRCEAFGWHTEVVDGHSVEELCKAFWQAGMINGKPTMIIAKTFKGKGIEGVEDKENWHGKAIPKDEVEAVINSIKALITNEKKLAPSQPTEDAPPVCLQNIKLSAPPAYKHLEKVATRKAYGTALAKLGHDNKNVIALDCDTKNSTFSDMFKKAHPKRFIECYIAEQNMVSVAVGCCTRDRTVAFASTFATFFCRAFDQLRMAAISESNINLVGSHCGISIGEDGPSQMGLEDLALFRAIPTSTIFYPSDAVSTERAVELAANTKGICFIRTSRPETTIIYKNTEVFEVGKAKVLRKNNKDVLTVVAAGVTMREALAAAAELAEEGIYIRVIDPFTIKPIDDQTIISCTKCTKLKKIITVEDHYYEGGLGEAVTAAVALDPVIKVHRMAVSGVAFSATSAELMEKFEIDAKAIVKTVKELSEDQY
SIO_010081: tkt
subclass of: SO_0000673
so part of: tkt
location: complement(join(626260..626438,627669..627791,628910..629006,630532..630615,632457..632587,632814..632970,633846..634010,635511..635704,636712..636839,638354..638545,641106..641203,641443..641556,642057..642140))
location: region:626260-642140:-1
so has part: feature:642057-642140:-1:exon
so has part: feature:641443-641556:-1:exon
so has part: feature:641106-641203:-1:exon
so has part: feature:638354-638545:-1:exon
so has part: feature:636712-636839:-1:exon
so has part: feature:635511-635704:-1:exon
so has part: feature:633846-634010:-1:exon
so has part: feature:632814-632970:-1:exon
so has part: feature:632457-632587:-1:exon
so has part: feature:630532-630615:-1:exon
so has part: feature:628910-629006:-1:exon
so has part: feature:627669-627791:-1:exon
so has part: feature:626260-626438:-1:exon

XP_032892431.1
type: Protein
SIO_000068: ncbiprotein

position:642140:-1
position: 642140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642057-642140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641443-641556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641106-641203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638354-638545:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:636712-636839:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635511-635704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:633846-634010:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:632814-632970:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:632457-632587:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:630532-630615:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628910-629006:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:627669-627791:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:626260-626438:-1:exon

dcp1a
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: dcp1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(651821..701308)
location: region:651821-701308:-1
so has part: feature:651821-701308:-1:exon
subclass of: SO_0000010

116983026
type: Gene
SIO_000068: ncbigene

position:651821:-1
position: 651821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701308:-1
position: 701308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651821-701308:-1:exon

dcp1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dcp1a
product: decapping mRNA 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033036541.1
SIO_010081: dcp1a
subclass of: SO_0000673
so part of: dcp1a
location: complement(join(651821..653285,661543..661752,663389..664099,665206..665325,675065..675203,677680..677746,689985..690112,698094..698134,700689..701308))
location: region:651821-701308:-1
so has part: feature:700689-701308:-1:exon
so has part: feature:698094-698134:-1:exon
so has part: feature:689985-690112:-1:exon
so has part: feature:677680-677746:-1:exon
so has part: feature:675065-675203:-1:exon
so has part: feature:665206-665325:-1:exon
so has part: feature:663389-664099:-1:exon
so has part: feature:661543-661752:-1:exon
so has part: feature:651821-653285:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:700689-701308:-1:exon

position:700689:-1
position: 700689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:698094-698134:-1:exon

position:698094:-1
position: 698094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698134:-1
position: 698134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:689985-690112:-1:exon

position:689985:-1
position: 689985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690112:-1
position: 690112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:677680-677746:-1:exon

position:677680:-1
position: 677680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677746:-1
position: 677746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:675065-675203:-1:exon

position:675065:-1
position: 675065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675203:-1
position: 675203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:665206-665325:-1:exon

position:665206:-1
position: 665206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665325:-1
position: 665325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:663389-664099:-1:exon

position:663389:-1
position: 663389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664099:-1
position: 664099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:661543-661752:-1:exon

position:661543:-1
position: 661543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661752:-1
position: 661752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:651821-653285:-1:exon

position:653285:-1
position: 653285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dcp1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dcp1a
product: decapping mRNA 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033036542.1
SIO_010081: dcp1a
subclass of: SO_0000673
so part of: dcp1a
location: complement(join(651821..653285,661543..661752,663389..664099,665206..665325,675065..675203,677680..677746,689985..690112,698094..698134,701228..701246))
location: region:651821-701246:-1
so has part: feature:701228-701246:-1:exon
so has part: feature:698094-698134:-1:exon
so has part: feature:689985-690112:-1:exon
so has part: feature:677680-677746:-1:exon
so has part: feature:675065-675203:-1:exon
so has part: feature:665206-665325:-1:exon
so has part: feature:663389-664099:-1:exon
so has part: feature:661543-661752:-1:exon
so has part: feature:651821-653285:-1:exon

position:701246:-1
position: 701246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701228-701246:-1:exon

position:701228:-1
position: 701228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:698094-698134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689985-690112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:677680-677746:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:675065-675203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:665206-665325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663389-664099:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:661543-661752:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:651821-653285:-1:exon

dcp1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dcp1a
product: decapping mRNA 1A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033036543.1
SIO_010081: dcp1a
subclass of: SO_0000673
so part of: dcp1a
location: complement(join(651821..653285,661543..661752,663389..664099,665206..665325,675065..675203,677680..677746,689985..690112,700689..700831))
location: region:651821-700831:-1
so has part: feature:700689-700831:-1:exon
so has part: feature:689985-690112:-1:exon
so has part: feature:677680-677746:-1:exon
so has part: feature:675065-675203:-1:exon
so has part: feature:665206-665325:-1:exon
so has part: feature:663389-664099:-1:exon
so has part: feature:661543-661752:-1:exon
so has part: feature:651821-653285:-1:exon

position:700831:-1
position: 700831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700689-700831:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:689985-690112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677680-677746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:675065-675203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:665206-665325:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:663389-664099:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:661543-661752:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:651821-653285:-1:exon

dcp1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dcp1a
product: decapping mRNA 1A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033036544.1
SIO_010081: dcp1a
subclass of: SO_0000673
so part of: dcp1a
location: complement(join(651821..653285,661543..661752,663389..664099,665206..665325,675065..675203,677680..677746,689985..690112,698094..698134,700384..700644))
location: region:651821-700644:-1
so has part: feature:700384-700644:-1:exon
so has part: feature:698094-698134:-1:exon
so has part: feature:689985-690112:-1:exon
so has part: feature:677680-677746:-1:exon
so has part: feature:675065-675203:-1:exon
so has part: feature:665206-665325:-1:exon
so has part: feature:663389-664099:-1:exon
so has part: feature:661543-661752:-1:exon
so has part: feature:651821-653285:-1:exon

position:700644:-1
position: 700644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700384-700644:-1:exon

position:700384:-1
position: 700384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:698094-698134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689985-690112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:677680-677746:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:675065-675203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:665206-665325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663389-664099:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:661543-661752:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:651821-653285:-1:exon

dcp1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dcp1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mRNA-decapping enzyme 1A isoform X1
translation: MIPLGRAGRRCGYCVAMMVLCGGRVGGPERRVGSAGAGGNGVCVVPSPTAQVGGANMEALGKGRDISLSALQQNDPFISSIVDVTSQVALYNFNPKSSEWEKTDIEGTLFVYTRSASPYHGFTIMNRLNMKNLVEPINKDLEFQFQDPFLLYRNSNLSIYSIWFYDKNDCQRIAQLMAKVVQMEAQRVQQESPGRTTPNKTNGYDEESPIDILDMLSKAKEEYEQTCQFGDSSILSSSPGIHNSVGLAMKAPTDECTSSSSHHHKNNLSGAKHLTVEELFGAPVAKEQPINPNHDVVLTSQQDAKLGSQNLMQPFTYEQSTDKHLGSPESLNNKSSFTRLKCQEVSSEMLVTPAALQKNEKTKRMYNACTSPHILTSLNFEATANQTASTISTNGNSQRLQQEVKTISPLMMCPLSSDAACAHQTTSSAGSQPSQTATGDRTTSDIPSQGHELLQKLKLAHPHDQPHQTLGKPSLAANFSPLLVTPECFKEPNVKTTEVSLQVVLTPTTSAMGPSMLLSPSMFKQSAGAMSEAEGKYASASPLTLATEARSSPLPTVLSKTQLQETLTHLIKNDSDFLNTIHEAYLQMLLKNVVNIK
SIO_010081: dcp1a
subclass of: SO_0000673
so part of: dcp1a
location: complement(join(653208..653285,661543..661752,663389..664099,665206..665325,675065..675203,677680..677746,689985..690112,698094..698134,700689..700988))
location: region:653208-700988:-1
so has part: feature:700689-700988:-1:exon
so has part: feature:698094-698134:-1:exon
so has part: feature:689985-690112:-1:exon
so has part: feature:677680-677746:-1:exon
so has part: feature:675065-675203:-1:exon
so has part: feature:665206-665325:-1:exon
so has part: feature:663389-664099:-1:exon
so has part: feature:661543-661752:-1:exon
so has part: feature:653208-653285:-1:exon

XP_032892432.1
type: Protein
SIO_000068: ncbiprotein

position:653208:-1
position: 653208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700988:-1
position: 700988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700689-700988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:698094-698134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:689985-690112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:677680-677746:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:675065-675203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:665206-665325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663389-664099:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:661543-661752:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:653208-653285:-1:exon

dcp1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dcp1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mRNA-decapping enzyme 1A isoform X2
translation: MNRLNMKNLVEPINKDLEFQFQDPFLLYRNSNLSIYSIWFYDKNDCQRIAQLMAKVVQMEAQRVQQESPGRTTPNKTNGYDEESPIDILDMLSKAKEEYEQTCQFGDSSILSSSPGIHNSVGLAMKAPTDECTSSSSHHHKNNLSGAKHLTVEELFGAPVAKEQPINPNHDVVLTSQQDAKLGSQNLMQPFTYEQSTDKHLGSPESLNNKSSFTRLKCQEVSSEMLVTPAALQKNEKTKRMYNACTSPHILTSLNFEATANQTASTISTNGNSQRLQQEVKTISPLMMCPLSSDAACAHQTTSSAGSQPSQTATGDRTTSDIPSQGHELLQKLKLAHPHDQPHQTLGKPSLAANFSPLLVTPECFKEPNVKTTEVSLQVVLTPTTSAMGPSMLLSPSMFKQSAGAMSEAEGKYASASPLTLATEARSSPLPTVLSKTQLQETLTHLIKNDSDFLNTIHEAYLQMLLKNVVNIK
SIO_010081: dcp1a
subclass of: SO_0000673
so part of: dcp1a
location: complement(join(653208..653285,661543..661752,663389..664099,665206..665325,675065..675203,677680..677746,689985..690081))
location: region:653208-690081:-1
so has part: feature:689985-690081:-1:exon
so has part: feature:677680-677746:-1:exon
so has part: feature:675065-675203:-1:exon
so has part: feature:665206-665325:-1:exon
so has part: feature:663389-664099:-1:exon
so has part: feature:661543-661752:-1:exon
so has part: feature:653208-653285:-1:exon

XP_032892433.1
type: Protein
SIO_000068: ncbiprotein

position:690081:-1
position: 690081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689985-690081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677680-677746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675065-675203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665206-665325:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663389-664099:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:661543-661752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:653208-653285:-1:exon

dcp1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dcp1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mRNA-decapping enzyme 1A isoform X2
translation: MNRLNMKNLVEPINKDLEFQFQDPFLLYRNSNLSIYSIWFYDKNDCQRIAQLMAKVVQMEAQRVQQESPGRTTPNKTNGYDEESPIDILDMLSKAKEEYEQTCQFGDSSILSSSPGIHNSVGLAMKAPTDECTSSSSHHHKNNLSGAKHLTVEELFGAPVAKEQPINPNHDVVLTSQQDAKLGSQNLMQPFTYEQSTDKHLGSPESLNNKSSFTRLKCQEVSSEMLVTPAALQKNEKTKRMYNACTSPHILTSLNFEATANQTASTISTNGNSQRLQQEVKTISPLMMCPLSSDAACAHQTTSSAGSQPSQTATGDRTTSDIPSQGHELLQKLKLAHPHDQPHQTLGKPSLAANFSPLLVTPECFKEPNVKTTEVSLQVVLTPTTSAMGPSMLLSPSMFKQSAGAMSEAEGKYASASPLTLATEARSSPLPTVLSKTQLQETLTHLIKNDSDFLNTIHEAYLQMLLKNVVNIK
SIO_010081: dcp1a
subclass of: SO_0000673
so part of: dcp1a
location: complement(join(653208..653285,661543..661752,663389..664099,665206..665325,675065..675203,677680..677746,689985..690081))
location: region:653208-690081:-1
so has part: feature:689985-690081:-1:exon
so has part: feature:677680-677746:-1:exon
so has part: feature:675065-675203:-1:exon
so has part: feature:665206-665325:-1:exon
so has part: feature:663389-664099:-1:exon
so has part: feature:661543-661752:-1:exon
so has part: feature:653208-653285:-1:exon

XP_032892434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:689985-690081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677680-677746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675065-675203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665206-665325:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663389-664099:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:661543-661752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:653208-653285:-1:exon

dcp1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dcp1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mRNA-decapping enzyme 1A isoform X2
translation: MNRLNMKNLVEPINKDLEFQFQDPFLLYRNSNLSIYSIWFYDKNDCQRIAQLMAKVVQMEAQRVQQESPGRTTPNKTNGYDEESPIDILDMLSKAKEEYEQTCQFGDSSILSSSPGIHNSVGLAMKAPTDECTSSSSHHHKNNLSGAKHLTVEELFGAPVAKEQPINPNHDVVLTSQQDAKLGSQNLMQPFTYEQSTDKHLGSPESLNNKSSFTRLKCQEVSSEMLVTPAALQKNEKTKRMYNACTSPHILTSLNFEATANQTASTISTNGNSQRLQQEVKTISPLMMCPLSSDAACAHQTTSSAGSQPSQTATGDRTTSDIPSQGHELLQKLKLAHPHDQPHQTLGKPSLAANFSPLLVTPECFKEPNVKTTEVSLQVVLTPTTSAMGPSMLLSPSMFKQSAGAMSEAEGKYASASPLTLATEARSSPLPTVLSKTQLQETLTHLIKNDSDFLNTIHEAYLQMLLKNVVNIK
SIO_010081: dcp1a
subclass of: SO_0000673
so part of: dcp1a
location: complement(join(653208..653285,661543..661752,663389..664099,665206..665325,675065..675203,677680..677746,689985..690081))
location: region:653208-690081:-1
so has part: feature:689985-690081:-1:exon
so has part: feature:677680-677746:-1:exon
so has part: feature:675065-675203:-1:exon
so has part: feature:665206-665325:-1:exon
so has part: feature:663389-664099:-1:exon
so has part: feature:661543-661752:-1:exon
so has part: feature:653208-653285:-1:exon

XP_032892435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:689985-690081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677680-677746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675065-675203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665206-665325:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663389-664099:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:661543-661752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:653208-653285:-1:exon

cacna1d
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: cacna1d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 706588..1058717
location: region:706588-1058717:1
so has part: feature:706588-1058717:1:exon
subclass of: SO_0000010

116983028
type: Gene
SIO_000068: ncbigene

position:706588:1
position: 706588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058717:1
position: 1058717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706588-1058717:1:exon

cacna1d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cacna1d
product: calcium voltage-gated channel subunit alpha1 D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033036547.1
SIO_010081: cacna1d
subclass of: SO_0000673
so part of: cacna1d
location: join(706588..706721,728429..728741,729952..730057,851891..852030,854683..854837,855728..855880,858265..858461,861316..861419,875063..875232,881847..881921,892418..892508,899576..899602,904107..904267,904517..904742,909560..909767,910621..910741,915164..915278,916558..916639,916769..916826,919545..919677,924213..924342,928255..928314,932641..932747,936944..937031,937127..937234,937332..937384,937826..937972,939394..939595,943422..943580,945593..945703,950922..950951,952518..952601,961151..961195,961634..961762,965842..965907,967706..967797,970600..970759,972798..972925,976088..976184,977138..977240,983980..984081,990496..990626,1025564..1025680,1033034..1033401,1038211..1038237,1038530..1038679,1040499..1040665,1046757..1046878,1052930..1053250,1056338..1058717)
location: region:706588-1058717:1
so has part: feature:706588-706721:1:exon
so has part: feature:728429-728741:1:exon
so has part: feature:729952-730057:1:exon
so has part: feature:851891-852030:1:exon
so has part: feature:854683-854837:1:exon
so has part: feature:855728-855880:1:exon
so has part: feature:858265-858461:1:exon
so has part: feature:861316-861419:1:exon
so has part: feature:875063-875232:1:exon
so has part: feature:881847-881921:1:exon
so has part: feature:892418-892508:1:exon
so has part: feature:899576-899602:1:exon
so has part: feature:904107-904267:1:exon
so has part: feature:904517-904742:1:exon
so has part: feature:909560-909767:1:exon
so has part: feature:910621-910741:1:exon
so has part: feature:915164-915278:1:exon
so has part: feature:916558-916639:1:exon
so has part: feature:916769-916826:1:exon
so has part: feature:919545-919677:1:exon
so has part: feature:924213-924342:1:exon
so has part: feature:928255-928314:1:exon
so has part: feature:932641-932747:1:exon
so has part: feature:936944-937031:1:exon
so has part: feature:937127-937234:1:exon
so has part: feature:937332-937384:1:exon
so has part: feature:937826-937972:1:exon
so has part: feature:939394-939595:1:exon
so has part: feature:943422-943580:1:exon
so has part: feature:945593-945703:1:exon
so has part: feature:950922-950951:1:exon
so has part: feature:952518-952601:1:exon
so has part: feature:961151-961195:1:exon
so has part: feature:961634-961762:1:exon
so has part: feature:965842-965907:1:exon
so has part: feature:967706-967797:1:exon
so has part: feature:970600-970759:1:exon
so has part: feature:972798-972925:1:exon
so has part: feature:976088-976184:1:exon
so has part: feature:977138-977240:1:exon
so has part: feature:983980-984081:1:exon
so has part: feature:990496-990626:1:exon
so has part: feature:1025564-1025680:1:exon
so has part: feature:1033034-1033401:1:exon
so has part: feature:1038211-1038237:1:exon
so has part: feature:1038530-1038679:1:exon
so has part: feature:1040499-1040665:1:exon
so has part: feature:1046757-1046878:1:exon
so has part: feature:1052930-1053250:1:exon
so has part: feature:1056338-1058717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:706588-706721:1:exon

position:706721:1
position: 706721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:728429-728741:1:exon

position:728429:1
position: 728429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728741:1
position: 728741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:729952-730057:1:exon

position:729952:1
position: 729952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730057:1
position: 730057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:851891-852030:1:exon

position:851891:1
position: 851891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852030:1
position: 852030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:854683-854837:1:exon

position:854683:1
position: 854683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854837:1
position: 854837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:855728-855880:1:exon

position:855728:1
position: 855728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855880:1
position: 855880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:858265-858461:1:exon

position:858265:1
position: 858265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858461:1
position: 858461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:861316-861419:1:exon

position:861316:1
position: 861316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861419:1
position: 861419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:875063-875232:1:exon

position:875063:1
position: 875063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875232:1
position: 875232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:881847-881921:1:exon

position:881847:1
position: 881847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881921:1
position: 881921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:892418-892508:1:exon

position:892418:1
position: 892418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892508:1
position: 892508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:899576-899602:1:exon

position:899576:1
position: 899576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899602:1
position: 899602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:904107-904267:1:exon

position:904107:1
position: 904107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904267:1
position: 904267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:904517-904742:1:exon

position:904517:1
position: 904517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904742:1
position: 904742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:909560-909767:1:exon

position:909560:1
position: 909560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909767:1
position: 909767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:910621-910741:1:exon

position:910621:1
position: 910621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910741:1
position: 910741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:915164-915278:1:exon

position:915164:1
position: 915164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915278:1
position: 915278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:916558-916639:1:exon

position:916558:1
position: 916558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916639:1
position: 916639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:916769-916826:1:exon

position:916769:1
position: 916769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916826:1
position: 916826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:919545-919677:1:exon

position:919545:1
position: 919545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919677:1
position: 919677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:924213-924342:1:exon

position:924213:1
position: 924213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924342:1
position: 924342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:928255-928314:1:exon

position:928255:1
position: 928255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928314:1
position: 928314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:932641-932747:1:exon

position:932641:1
position: 932641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932747:1
position: 932747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:936944-937031:1:exon

position:936944:1
position: 936944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937031:1
position: 937031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:937127-937234:1:exon

position:937127:1
position: 937127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937234:1
position: 937234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:937332-937384:1:exon

position:937332:1
position: 937332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937384:1
position: 937384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:937826-937972:1:exon

position:937826:1
position: 937826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937972:1
position: 937972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:939394-939595:1:exon

position:939394:1
position: 939394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939595:1
position: 939595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:943422-943580:1:exon

position:943422:1
position: 943422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943580:1
position: 943580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:945593-945703:1:exon

position:945593:1
position: 945593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945703:1
position: 945703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:950922-950951:1:exon

position:950922:1
position: 950922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950951:1
position: 950951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:952518-952601:1:exon

position:952518:1
position: 952518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952601:1
position: 952601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:961151-961195:1:exon

position:961151:1
position: 961151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961195:1
position: 961195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:961634-961762:1:exon

position:961634:1
position: 961634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961762:1
position: 961762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:965842-965907:1:exon

position:965842:1
position: 965842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965907:1
position: 965907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:967706-967797:1:exon

position:967706:1
position: 967706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967797:1
position: 967797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:970600-970759:1:exon

position:970600:1
position: 970600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970759:1
position: 970759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:972798-972925:1:exon

position:972798:1
position: 972798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972925:1
position: 972925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:976088-976184:1:exon

position:976088:1
position: 976088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976184:1
position: 976184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:977138-977240:1:exon

position:977138:1
position: 977138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977240:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:983980-984081:1:exon

position:983980:1
position: 983980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984081:1
position: 984081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:990496-990626:1:exon

position:990496:1
position: 990496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990626:1
position: 990626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1025564-1025680:1:exon

position:1025564:1
position: 1025564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025680:1
position: 1025680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1033034-1033401:1:exon

position:1033034:1
position: 1033034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033401:1
position: 1033401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1038211-1038237:1:exon

position:1038211:1
position: 1038211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038237:1
position: 1038237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1038530-1038679:1:exon

position:1038530:1
position: 1038530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038679:1
position: 1038679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1040499-1040665:1:exon

position:1040499:1
position: 1040499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040665:1
position: 1040665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1046757-1046878:1:exon

position:1046757:1
position: 1046757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046878:1
position: 1046878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1052930-1053250:1:exon

position:1052930:1
position: 1052930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1053250:1
position: 1053250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1056338-1058717:1:exon

position:1056338:1
position: 1056338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cacna1d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cacna1d
product: calcium voltage-gated channel subunit alpha1 D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033036546.1
SIO_010081: cacna1d
subclass of: SO_0000673
so part of: cacna1d
location: join(727566..727717,728429..728741,729952..730057,851891..852030,854683..854837,855728..855880,858265..858461,861316..861419,875063..875232,881847..881921,892418..892508,899576..899602,904107..904267,904517..904742,909560..909767,910621..910741,915164..915278,916558..916639,916769..916826,919545..919677,924213..924342,928255..928314,932641..932747,936944..937031,937127..937234,937332..937384,937826..937972,939394..939595,943422..943580,945593..945703,950922..950951,952518..952601,961151..961195,961634..961762,965842..965907,967706..967797,970600..970759,972798..972925,976088..976184,977138..977240,983980..984081,990496..990626,1025564..1025680,1033034..1033401,1038211..1038237,1038530..1038679,1040499..1040665,1046757..1046878,1052930..1053250,1056338..1058717)
location: region:727566-1058717:1
so has part: feature:727566-727717:1:exon
so has part: feature:728429-728741:1:exon
so has part: feature:729952-730057:1:exon
so has part: feature:851891-852030:1:exon
so has part: feature:854683-854837:1:exon
so has part: feature:855728-855880:1:exon
so has part: feature:858265-858461:1:exon
so has part: feature:861316-861419:1:exon
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so has part: feature:899576-899602:1:exon
so has part: feature:904107-904267:1:exon
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so has part: feature:909560-909767:1:exon
so has part: feature:910621-910741:1:exon
so has part: feature:915164-915278:1:exon
so has part: feature:916558-916639:1:exon
so has part: feature:916769-916826:1:exon
so has part: feature:919545-919677:1:exon
so has part: feature:924213-924342:1:exon
so has part: feature:928255-928314:1:exon
so has part: feature:932641-932747:1:exon
so has part: feature:936944-937031:1:exon
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so has part: feature:945593-945703:1:exon
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so has part: feature:961151-961195:1:exon
so has part: feature:961634-961762:1:exon
so has part: feature:965842-965907:1:exon
so has part: feature:967706-967797:1:exon
so has part: feature:970600-970759:1:exon
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so has part: feature:977138-977240:1:exon
so has part: feature:983980-984081:1:exon
so has part: feature:990496-990626:1:exon
so has part: feature:1025564-1025680:1:exon
so has part: feature:1033034-1033401:1:exon
so has part: feature:1038211-1038237:1:exon
so has part: feature:1038530-1038679:1:exon
so has part: feature:1040499-1040665:1:exon
so has part: feature:1046757-1046878:1:exon
so has part: feature:1052930-1053250:1:exon
so has part: feature:1056338-1058717:1:exon

position:727566:1
position: 727566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727566-727717:1:exon

position:727717:1
position: 727717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:728429-728741:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729952-730057:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:851891-852030:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:854683-854837:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:855728-855880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858265-858461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:861316-861419:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:875063-875232:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:881847-881921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892418-892508:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:899576-899602:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:904107-904267:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:904517-904742:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:909560-909767:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:910621-910741:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915164-915278:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:916558-916639:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:916769-916826:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:919545-919677:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:924213-924342:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:928255-928314:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:932641-932747:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:936944-937031:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:937127-937234:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:937332-937384:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:937826-937972:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:939394-939595:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:943422-943580:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:945593-945703:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:950922-950951:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:952518-952601:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:961151-961195:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:961634-961762:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:965842-965907:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:967706-967797:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:970600-970759:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:972798-972925:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:976088-976184:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:977138-977240:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:983980-984081:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:990496-990626:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1025564-1025680:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1033034-1033401:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1038211-1038237:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1038530-1038679:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1040499-1040665:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1046757-1046878:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1052930-1053250:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1056338-1058717:1:exon

cacna1d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cacna1d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent L-type calcium channel subunit alpha-1D isoform X1
translation: MYELREPYEGVNYVSNRLALPSEGPGLESNSPATRPTALSWQAAIEAARQAKAAATMNSTTESSSAEAQRKRLQFAKSKKQQGSTVNSRPARALFCLNLNNPIRRACISIVEWKPFDIFILIAIFANCVALAVYIPFPEDDSNSTNHDLETVEYAFLIIFTIETCLKIIAYGLMLHPNAYVRNGWNLMDFVIVIVGLFSVVLEQVTTKVENVDGHATSGGKSSGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHRTCYFINTNIISEDEPAPCAFSGNGYQCPMNGTECKGGWPGPNGGITNFDNFAFAMLTVFQCITMEGWTDVLYWMNDAMGHELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEDFENAEKRNRVTLAELLEKKKGKFAWFSQSSDTHANLPIGETGSDTTDNAAGGGSENATCCGSLCIRISKSKFSRRWRRWNRCLRRRCRVGVKSVTFYWLVIILVFLNTLTISSEHYNQPWWLTSIQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGIIETILVEFQVMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNSMRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQSLLTVFQILTGEDWNMVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTVQKETMEERERKRMSRNAEKRQEGKYEVDGIGENDRKILTGTQVSIDDQDEDKDPYPPSDVPDDDDEDEPEVPVGPRPQRLADLNLKEKIVPIPEGSAFFIFSNTNPIRVFCHRLINHGIFTNLILVFIMLSSISLAAEDPIRNHSFRNNILGYFDYAFTAIFTVEILFKMMTYGAFLHKGAFCRNYFNLLDILVVGVSLISFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKQFPEDCKGTFILYKDGEVDQPVIRDRVWYNSDYNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENIGPVYNNRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGELEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFALIMLNTLCLAVQHYEQSPFFNYTMDILNMVFTAVFTVEMVLKLIAFKPMVCVKKKERWLGYFSDSWNVFDFLIVIGSIIDVVLGEIDPFAKPTEAPPTGEPGNSEESSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFVKSFQALPYVALLIAMLFFIYAVIGMQTFGKIALQDHTQINRNNNFQTFFQSVLLLFRCATGEAWQEIMLACMPGRRCDPESDYGPGEENTCGSNFAIIYFITFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLEEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLDQANEELRAVIKKIWKRTSMKLLDQVVPPADDDEVTVGKFYATFLIQDYFRKFKRRKEQGLVGKQPRKNTTVALQAGLRTLHDIGPEIRRAISCDLQEEDIIEGAPEEDEDIYRRSGGLFGNHVNHVAVDERNSFQQTNVTQRPLQVKRTSSPPVADYDKYPPSSNTENSISHNQLNHSFPGKISPNSTNANLNNANVSKTANGKDQGSINHEQPTGRTCESHTSYPEEPRKSSTKRVRYYETNIRSDSGEGTVPTICREETKLDECFEEEQYSGDQEYYSGEEYYEEDSIPSVDKQIHRDYQNACHNNDVDFERPKGYHHPCGSYEDDEAQYYYESRRSPRRRLLPATPTGHRRPSFNFECLRRQNSQDDISLSPIFQQRTALPLHLMQHQVMAVAGLDSYKSRRLSPA…
SIO_010081: cacna1d
subclass of: SO_0000673
so part of: cacna1d
location: join(727690..727717,728429..728741,729952..730057,851891..852030,854683..854837,855728..855880,858265..858461,861316..861419,875063..875232,881847..881921,892418..892508,899576..899602,904107..904267,904517..904742,909560..909767,910621..910741,915164..915278,916558..916639,916769..916826,919545..919677,924213..924342,928255..928314,932641..932747,936944..937031,937127..937234,937332..937384,937826..937972,939394..939595,943422..943580,945593..945703,950922..950951,952518..952601,961151..961195,961634..961762,965842..965907,967706..967797,970600..970759,972798..972925,976088..976184,977138..977240,983980..984081,990496..990626,1025564..1025680,1033034..1033401,1038211..1038237,1038530..1038679,1040499..1040665,1046757..1046878,1052930..1053250,1056338..1056631)
location: region:727690-1056631:1
so has part: feature:727690-727717:1:exon
so has part: feature:728429-728741:1:exon
so has part: feature:729952-730057:1:exon
so has part: feature:851891-852030:1:exon
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so has part: feature:855728-855880:1:exon
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so has part: feature:899576-899602:1:exon
so has part: feature:904107-904267:1:exon
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so has part: feature:910621-910741:1:exon
so has part: feature:915164-915278:1:exon
so has part: feature:916558-916639:1:exon
so has part: feature:916769-916826:1:exon
so has part: feature:919545-919677:1:exon
so has part: feature:924213-924342:1:exon
so has part: feature:928255-928314:1:exon
so has part: feature:932641-932747:1:exon
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so has part: feature:939394-939595:1:exon
so has part: feature:943422-943580:1:exon
so has part: feature:945593-945703:1:exon
so has part: feature:950922-950951:1:exon
so has part: feature:952518-952601:1:exon
so has part: feature:961151-961195:1:exon
so has part: feature:961634-961762:1:exon
so has part: feature:965842-965907:1:exon
so has part: feature:967706-967797:1:exon
so has part: feature:970600-970759:1:exon
so has part: feature:972798-972925:1:exon
so has part: feature:976088-976184:1:exon
so has part: feature:977138-977240:1:exon
so has part: feature:983980-984081:1:exon
so has part: feature:990496-990626:1:exon
so has part: feature:1025564-1025680:1:exon
so has part: feature:1033034-1033401:1:exon
so has part: feature:1038211-1038237:1:exon
so has part: feature:1038530-1038679:1:exon
so has part: feature:1040499-1040665:1:exon
so has part: feature:1046757-1046878:1:exon
so has part: feature:1052930-1053250:1:exon
so has part: feature:1056338-1056631:1:exon

XP_032892437.1
type: Protein
SIO_000068: ncbiprotein

position:727690:1
position: 727690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056631:1
position: 1056631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727690-727717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:728429-728741:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729952-730057:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:851891-852030:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:854683-854837:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:855728-855880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858265-858461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:861316-861419:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:875063-875232:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:881847-881921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892418-892508:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:899576-899602:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:904107-904267:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:904517-904742:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:909560-909767:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:910621-910741:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915164-915278:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:916558-916639:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:916769-916826:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:919545-919677:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:924213-924342:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:928255-928314:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:932641-932747:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:936944-937031:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:937127-937234:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:937332-937384:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:937826-937972:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:939394-939595:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:943422-943580:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:945593-945703:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:950922-950951:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:952518-952601:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:961151-961195:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:961634-961762:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:965842-965907:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:967706-967797:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:970600-970759:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:972798-972925:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:976088-976184:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:977138-977240:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:983980-984081:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:990496-990626:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1025564-1025680:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1033034-1033401:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1038211-1038237:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1038530-1038679:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1040499-1040665:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1046757-1046878:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1052930-1053250:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1056338-1056631:1:exon

cacna1d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cacna1d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent L-type calcium channel subunit alpha-1D isoform X2
translation: MNSTTESSSAEAQRKRLQFAKSKKQQGSTVNSRPARALFCLNLNNPIRRACISIVEWKPFDIFILIAIFANCVALAVYIPFPEDDSNSTNHDLETVEYAFLIIFTIETCLKIIAYGLMLHPNAYVRNGWNLMDFVIVIVGLFSVVLEQVTTKVENVDGHATSGGKSSGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHRTCYFINTNIISEDEPAPCAFSGNGYQCPMNGTECKGGWPGPNGGITNFDNFAFAMLTVFQCITMEGWTDVLYWMNDAMGHELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEDFENAEKRNRVTLAELLEKKKGKFAWFSQSSDTHANLPIGETGSDTTDNAAGGGSENATCCGSLCIRISKSKFSRRWRRWNRCLRRRCRVGVKSVTFYWLVIILVFLNTLTISSEHYNQPWWLTSIQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGIIETILVEFQVMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNSMRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQSLLTVFQILTGEDWNMVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTVQKETMEERERKRMSRNAEKRQEGKYEVDGIGENDRKILTGTQVSIDDQDEDKDPYPPSDVPDDDDEDEPEVPVGPRPQRLADLNLKEKIVPIPEGSAFFIFSNTNPIRVFCHRLINHGIFTNLILVFIMLSSISLAAEDPIRNHSFRNNILGYFDYAFTAIFTVEILFKMMTYGAFLHKGAFCRNYFNLLDILVVGVSLISFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKQFPEDCKGTFILYKDGEVDQPVIRDRVWYNSDYNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENIGPVYNNRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGELEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFALIMLNTLCLAVQHYEQSPFFNYTMDILNMVFTAVFTVEMVLKLIAFKPMVCVKKKERWLGYFSDSWNVFDFLIVIGSIIDVVLGEIDPFAKPTEAPPTGEPGNSEESSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFVKSFQALPYVALLIAMLFFIYAVIGMQTFGKIALQDHTQINRNNNFQTFFQSVLLLFRCATGEAWQEIMLACMPGRRCDPESDYGPGEENTCGSNFAIIYFITFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLEEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLDQANEELRAVIKKIWKRTSMKLLDQVVPPADDDEVTVGKFYATFLIQDYFRKFKRRKEQGLVGKQPRKNTTVALQAGLRTLHDIGPEIRRAISCDLQEEDIIEGAPEEDEDIYRRSGGLFGNHVNHVAVDERNSFQQTNVTQRPLQVKRTSSPPVADYDKYPPSSNTENSISHNQLNHSFPGKISPNSTNANLNNANVSKTANGKDQGSINHEQPTGRTCESHTSYPEEPRKSSTKRVRYYETNIRSDSGEGTVPTICREETKLDECFEEEQYSGDQEYYSGEEYYEEDSIPSVDKQIHRDYQNACHNNDVDFERPKGYHHPCGSYEDDEAQYYYESRRSPRRRLLPATPTGHRRPSFNFECLRRQNSQDDISLSPIFQQRTALPLHLMQHQVMAVAGLDSYKSRRLSPARSTRSWATPPATPPSKERSPYYTPLIRVDHVASTENMNGSLPSMNRSSWYTEDVDI…
SIO_010081: cacna1d
subclass of: SO_0000673
so part of: cacna1d
location: join(728569..728741,729952..730057,851891..852030,854683..854837,855728..855880,858265..858461,861316..861419,875063..875232,881847..881921,892418..892508,899576..899602,904107..904267,904517..904742,909560..909767,910621..910741,915164..915278,916558..916639,916769..916826,919545..919677,924213..924342,928255..928314,932641..932747,936944..937031,937127..937234,937332..937384,937826..937972,939394..939595,943422..943580,945593..945703,950922..950951,952518..952601,961151..961195,961634..961762,965842..965907,967706..967797,970600..970759,972798..972925,976088..976184,977138..977240,983980..984081,990496..990626,1025564..1025680,1033034..1033401,1038211..1038237,1038530..1038679,1040499..1040665,1046757..1046878,1052930..1053250,1056338..1056631)
location: region:728569-1056631:1
so has part: feature:728569-728741:1:exon
so has part: feature:729952-730057:1:exon
so has part: feature:851891-852030:1:exon
so has part: feature:854683-854837:1:exon
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so has part: feature:858265-858461:1:exon
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so has part: feature:875063-875232:1:exon
so has part: feature:881847-881921:1:exon
so has part: feature:892418-892508:1:exon
so has part: feature:899576-899602:1:exon
so has part: feature:904107-904267:1:exon
so has part: feature:904517-904742:1:exon
so has part: feature:909560-909767:1:exon
so has part: feature:910621-910741:1:exon
so has part: feature:915164-915278:1:exon
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so has part: feature:919545-919677:1:exon
so has part: feature:924213-924342:1:exon
so has part: feature:928255-928314:1:exon
so has part: feature:932641-932747:1:exon
so has part: feature:936944-937031:1:exon
so has part: feature:937127-937234:1:exon
so has part: feature:937332-937384:1:exon
so has part: feature:937826-937972:1:exon
so has part: feature:939394-939595:1:exon
so has part: feature:943422-943580:1:exon
so has part: feature:945593-945703:1:exon
so has part: feature:950922-950951:1:exon
so has part: feature:952518-952601:1:exon
so has part: feature:961151-961195:1:exon
so has part: feature:961634-961762:1:exon
so has part: feature:965842-965907:1:exon
so has part: feature:967706-967797:1:exon
so has part: feature:970600-970759:1:exon
so has part: feature:972798-972925:1:exon
so has part: feature:976088-976184:1:exon
so has part: feature:977138-977240:1:exon
so has part: feature:983980-984081:1:exon
so has part: feature:990496-990626:1:exon
so has part: feature:1025564-1025680:1:exon
so has part: feature:1033034-1033401:1:exon
so has part: feature:1038211-1038237:1:exon
so has part: feature:1038530-1038679:1:exon
so has part: feature:1040499-1040665:1:exon
so has part: feature:1046757-1046878:1:exon
so has part: feature:1052930-1053250:1:exon
so has part: feature:1056338-1056631:1:exon

XP_032892438.1
type: Protein
SIO_000068: ncbiprotein

position:728569:1
position: 728569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728569-728741:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729952-730057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:851891-852030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854683-854837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:855728-855880:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858265-858461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:861316-861419:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:875063-875232:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:881847-881921:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892418-892508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:899576-899602:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:904107-904267:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:904517-904742:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909560-909767:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:910621-910741:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:915164-915278:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:916558-916639:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:916769-916826:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:919545-919677:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:924213-924342:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:928255-928314:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:932641-932747:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:936944-937031:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:937127-937234:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:937332-937384:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:937826-937972:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:939394-939595:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:943422-943580:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:945593-945703:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:950922-950951:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:952518-952601:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:961151-961195:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:961634-961762:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:965842-965907:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:967706-967797:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:970600-970759:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:972798-972925:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:976088-976184:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:977138-977240:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:983980-984081:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:990496-990626:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1025564-1025680:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1033034-1033401:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1038211-1038237:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1038530-1038679:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1040499-1040665:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1046757-1046878:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1052930-1053250:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1056338-1056631:1:exon

cacna1d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cacna1d
product: calcium voltage-gated channel subunit alpha1 D, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033036548.1
SIO_010081: cacna1d
subclass of: SO_0000673
so part of: cacna1d
location: join(835040..835062,851891..852030,854683..854837,855728..855880,858265..858461,861316..861419,875063..875232,881847..881921,892418..892508,899576..899602,904107..904267,904517..904742,909560..909767,910621..910741,915164..915278,916558..916639,916769..916826,919545..919677,924213..924342,928255..928314,932641..932747,936944..937031,937127..937234,937332..937384,937826..937972,939394..939595,943422..943580,945593..945703,950922..950951,952518..952601,961151..961195,961634..961762,965842..965907,967706..967797,970600..970759,972798..972925,976088..976184,977138..977240,983980..984081,990496..990626,1025564..1025680,1033034..1033401,1038211..1038237,1038530..1038679,1040499..1040665,1046757..1046878,1052930..1053250,1056338..1058717)
location: region:835040-1058717:1
so has part: feature:835040-835062:1:exon
so has part: feature:851891-852030:1:exon
so has part: feature:854683-854837:1:exon
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so has part: feature:924213-924342:1:exon
so has part: feature:928255-928314:1:exon
so has part: feature:932641-932747:1:exon
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so has part: feature:937332-937384:1:exon
so has part: feature:937826-937972:1:exon
so has part: feature:939394-939595:1:exon
so has part: feature:943422-943580:1:exon
so has part: feature:945593-945703:1:exon
so has part: feature:950922-950951:1:exon
so has part: feature:952518-952601:1:exon
so has part: feature:961151-961195:1:exon
so has part: feature:961634-961762:1:exon
so has part: feature:965842-965907:1:exon
so has part: feature:967706-967797:1:exon
so has part: feature:970600-970759:1:exon
so has part: feature:972798-972925:1:exon
so has part: feature:976088-976184:1:exon
so has part: feature:977138-977240:1:exon
so has part: feature:983980-984081:1:exon
so has part: feature:990496-990626:1:exon
so has part: feature:1025564-1025680:1:exon
so has part: feature:1033034-1033401:1:exon
so has part: feature:1038211-1038237:1:exon
so has part: feature:1038530-1038679:1:exon
so has part: feature:1040499-1040665:1:exon
so has part: feature:1046757-1046878:1:exon
so has part: feature:1052930-1053250:1:exon
so has part: feature:1056338-1058717:1:exon

position:835040:1
position: 835040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835040-835062:1:exon

position:835062:1
position: 835062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:851891-852030:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854683-854837:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855728-855880:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858265-858461:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861316-861419:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875063-875232:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:881847-881921:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:892418-892508:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:899576-899602:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:904107-904267:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:904517-904742:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:909560-909767:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:910621-910741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:915164-915278:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916558-916639:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:916769-916826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:919545-919677:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:924213-924342:1:exon

urn:…
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SIO_000628: feature:928255-928314:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:932641-932747:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:936944-937031:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:937127-937234:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:937332-937384:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:937826-937972:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:939394-939595:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:943422-943580:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:945593-945703:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:950922-950951:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:952518-952601:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:961151-961195:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:961634-961762:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:965842-965907:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:967706-967797:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:970600-970759:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:972798-972925:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:976088-976184:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:977138-977240:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:983980-984081:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:990496-990626:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1025564-1025680:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1033034-1033401:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1038211-1038237:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1038530-1038679:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1040499-1040665:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1046757-1046878:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1052930-1053250:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1056338-1058717:1:exon

cacna1d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cacna1d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent L-type calcium channel subunit alpha-1D isoform X3
translation: MLHPNAYVRNGWNLMDFVIVIVGLFSVVLEQVTTKVENVDGHATSGGKSSGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHRTCYFINTNIISEDEPAPCAFSGNGYQCPMNGTECKGGWPGPNGGITNFDNFAFAMLTVFQCITMEGWTDVLYWMNDAMGHELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEDFENAEKRNRVTLAELLEKKKGKFAWFSQSSDTHANLPIGETGSDTTDNAAGGGSENATCCGSLCIRISKSKFSRRWRRWNRCLRRRCRVGVKSVTFYWLVIILVFLNTLTISSEHYNQPWWLTSIQDIANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGIIETILVEFQVMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNSMRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQSLLTVFQILTGEDWNMVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTVQKETMEERERKRMSRNAEKRQEGKYEVDGIGENDRKILTGTQVSIDDQDEDKDPYPPSDVPDDDDEDEPEVPVGPRPQRLADLNLKEKIVPIPEGSAFFIFSNTNPIRVFCHRLINHGIFTNLILVFIMLSSISLAAEDPIRNHSFRNNILGYFDYAFTAIFTVEILFKMMTYGAFLHKGAFCRNYFNLLDILVVGVSLISFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKQFPEDCKGTFILYKDGEVDQPVIRDRVWYNSDYNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENIGPVYNNRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGELEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFALIMLNTLCLAVQHYEQSPFFNYTMDILNMVFTAVFTVEMVLKLIAFKPMVCVKKKERWLGYFSDSWNVFDFLIVIGSIIDVVLGEIDPFAKPTEAPPTGEPGNSEESSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFVKSFQALPYVALLIAMLFFIYAVIGMQTFGKIALQDHTQINRNNNFQTFFQSVLLLFRCATGEAWQEIMLACMPGRRCDPESDYGPGEENTCGSNFAIIYFITFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLEEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLDQANEELRAVIKKIWKRTSMKLLDQVVPPADDDEVTVGKFYATFLIQDYFRKFKRRKEQGLVGKQPRKNTTVALQAGLRTLHDIGPEIRRAISCDLQEEDIIEGAPEEDEDIYRRSGGLFGNHVNHVAVDERNSFQQTNVTQRPLQVKRTSSPPVADYDKYPPSSNTENSISHNQLNHSFPGKISPNSTNANLNNANVSKTANGKDQGSINHEQPTGRTCESHTSYPEEPRKSSTKRVRYYETNIRSDSGEGTVPTICREETKLDECFEEEQYSGDQEYYSGEEYYEEDSIPSVDKQIHRDYQNACHNNDVDFERPKGYHHPCGSYEDDEAQYYYESRRSPRRRLLPATPTGHRRPSFNFECLRRQNSQDDISLSPIFQQRTALPLHLMQHQVMAVAGLDSYKSRRLSPARSTRSWATPPATPPSKERSPYYTPLIRVDHVASTENMNGSLPSMNRSSWYTEDVDIPYRTHTPTKLAVPNSFLHRYYEKRGSADSLVEAVLISEGLGQYARDPKFVSVTKHELADACDMTIDEMESAASNLLNGNLHNGTTGDLLSIKNRRDYELQDYGVEYSDEEPDTGIYE…
SIO_010081: cacna1d
subclass of: SO_0000673
so part of: cacna1d
location: join(851963..852030,854683..854837,855728..855880,858265..858461,861316..861419,875063..875232,881847..881921,892418..892508,899576..899602,904107..904267,904517..904742,909560..909767,910621..910741,915164..915278,916558..916639,916769..916826,919545..919677,924213..924342,928255..928314,932641..932747,936944..937031,937127..937234,937332..937384,937826..937972,939394..939595,943422..943580,945593..945703,950922..950951,952518..952601,961151..961195,961634..961762,965842..965907,967706..967797,970600..970759,972798..972925,976088..976184,977138..977240,983980..984081,990496..990626,1025564..1025680,1033034..1033401,1038211..1038237,1038530..1038679,1040499..1040665,1046757..1046878,1052930..1053250,1056338..1056631)
location: region:851963-1056631:1
so has part: feature:851963-852030:1:exon
so has part: feature:854683-854837:1:exon
so has part: feature:855728-855880:1:exon
so has part: feature:858265-858461:1:exon
so has part: feature:861316-861419:1:exon
so has part: feature:875063-875232:1:exon
so has part: feature:881847-881921:1:exon
so has part: feature:892418-892508:1:exon
so has part: feature:899576-899602:1:exon
so has part: feature:904107-904267:1:exon
so has part: feature:904517-904742:1:exon
so has part: feature:909560-909767:1:exon
so has part: feature:910621-910741:1:exon
so has part: feature:915164-915278:1:exon
so has part: feature:916558-916639:1:exon
so has part: feature:916769-916826:1:exon
so has part: feature:919545-919677:1:exon
so has part: feature:924213-924342:1:exon
so has part: feature:928255-928314:1:exon
so has part: feature:932641-932747:1:exon
so has part: feature:936944-937031:1:exon
so has part: feature:937127-937234:1:exon
so has part: feature:937332-937384:1:exon
so has part: feature:937826-937972:1:exon
so has part: feature:939394-939595:1:exon
so has part: feature:943422-943580:1:exon
so has part: feature:945593-945703:1:exon
so has part: feature:950922-950951:1:exon
so has part: feature:952518-952601:1:exon
so has part: feature:961151-961195:1:exon
so has part: feature:961634-961762:1:exon
so has part: feature:965842-965907:1:exon
so has part: feature:967706-967797:1:exon
so has part: feature:970600-970759:1:exon
so has part: feature:972798-972925:1:exon
so has part: feature:976088-976184:1:exon
so has part: feature:977138-977240:1:exon
so has part: feature:983980-984081:1:exon
so has part: feature:990496-990626:1:exon
so has part: feature:1025564-1025680:1:exon
so has part: feature:1033034-1033401:1:exon
so has part: feature:1038211-1038237:1:exon
so has part: feature:1038530-1038679:1:exon
so has part: feature:1040499-1040665:1:exon
so has part: feature:1046757-1046878:1:exon
so has part: feature:1052930-1053250:1:exon
so has part: feature:1056338-1056631:1:exon

XP_032892439.1
type: Protein
SIO_000068: ncbiprotein

position:851963:1
position: 851963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:851963-852030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854683-854837:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:855728-855880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:858265-858461:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:861316-861419:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875063-875232:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:881847-881921:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892418-892508:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:899576-899602:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:904107-904267:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:904517-904742:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:909560-909767:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:910621-910741:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:915164-915278:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:916558-916639:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916769-916826:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:919545-919677:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:924213-924342:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:928255-928314:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:932641-932747:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:936944-937031:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:937127-937234:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:937332-937384:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:937826-937972:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:939394-939595:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:943422-943580:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:945593-945703:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:950922-950951:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:952518-952601:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:961151-961195:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:961634-961762:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:965842-965907:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:967706-967797:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:970600-970759:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:972798-972925:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:976088-976184:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:977138-977240:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:983980-984081:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:990496-990626:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1025564-1025680:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1033034-1033401:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1038211-1038237:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1038530-1038679:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1040499-1040665:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1046757-1046878:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1052930-1053250:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1056338-1056631:1:exon

chdh
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: chdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1060569..1103335)
location: region:1060569-1103335:-1
so has part: feature:1060569-1103335:-1:exon
subclass of: SO_0000010

116983029
type: Gene
SIO_000068: ncbigene

position:1060569:-1
position: 1060569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103335:-1
position: 1103335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060569-1103335:-1:exon

chdh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: chdh
product: choline dehydrogenase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033036549.1
SIO_010081: chdh
subclass of: SO_0000673
so part of: chdh
location: complement(join(1060569..1061212,1062201..1062303,1065075..1065217,1067236..1067370,1074575..1074704,1078853..1079004,1089490..1090366,1103183..1103335))
location: region:1060569-1103335:-1
so has part: feature:1103183-1103335:-1:exon
so has part: feature:1089490-1090366:-1:exon
so has part: feature:1078853-1079004:-1:exon
so has part: feature:1074575-1074704:-1:exon
so has part: feature:1067236-1067370:-1:exon
so has part: feature:1065075-1065217:-1:exon
so has part: feature:1062201-1062303:-1:exon
so has part: feature:1060569-1061212:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1103183-1103335:-1:exon

position:1103183:-1
position: 1103183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1089490-1090366:-1:exon

position:1089490:-1
position: 1089490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090366:-1
position: 1090366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1078853-1079004:-1:exon

position:1078853:-1
position: 1078853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079004:-1
position: 1079004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1074575-1074704:-1:exon

position:1074575:-1
position: 1074575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074704:-1
position: 1074704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1067236-1067370:-1:exon

position:1067236:-1
position: 1067236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067370:-1
position: 1067370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1065075-1065217:-1:exon

position:1065075:-1
position: 1065075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065217:-1
position: 1065217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1062201-1062303:-1:exon

position:1062201:-1
position: 1062201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062303:-1
position: 1062303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1060569-1061212:-1:exon

position:1061212:-1
position: 1061212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

chdh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: chdh
product: choline dehydrogenase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033036551.1
SIO_010081: chdh
subclass of: SO_0000673
so part of: chdh
location: complement(join(1060569..1061212,1062201..1062303,1065075..1065217,1067236..1067370,1074575..1074704,1078853..1079004,1089490..1090366,1102560..1102706,1103183..1103317))
location: region:1060569-1103317:-1
so has part: feature:1103183-1103317:-1:exon
so has part: feature:1102560-1102706:-1:exon
so has part: feature:1089490-1090366:-1:exon
so has part: feature:1078853-1079004:-1:exon
so has part: feature:1074575-1074704:-1:exon
so has part: feature:1067236-1067370:-1:exon
so has part: feature:1065075-1065217:-1:exon
so has part: feature:1062201-1062303:-1:exon
so has part: feature:1060569-1061212:-1:exon

position:1103317:-1
position: 1103317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103183-1103317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102560-1102706:-1:exon

position:1102560:-1
position: 1102560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102706:-1
position: 1102706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1089490-1090366:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1078853-1079004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074575-1074704:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1067236-1067370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1065075-1065217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1062201-1062303:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1060569-1061212:-1:exon

chdh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: chdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline dehydrogenase, mitochondrial
translation: MNRLIGFAKTNAASVLVTRSLQQQNFKMLSKNYASKTPAYNYVIVGAGSAGCVLANRLTEDSGDSVLLLEAGPKDTLLNSKRLLWKIHMPAALIYNLCDDKYNWYYHTTAQRHMNNRMMYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWQKQGATGWDYDHCLPYFRKAQCHELGADRYRGGDGPLHVSRTKTKHPLHLAFLEAGQQAGYPFTDDMNGFQQEGVGWMDMTIYKGQRWSAASAYLRPSISRSNLTTEVKTFVTKILFDGTKAIGVEYVQGGLTKKVYAVKEVILSGGSINSPQLLLLSGVGNADDLKALGIPVVCHRPGVGQNLQDHLELYVQQQCNKPITLYKSQKPIKMIQIGLEWLWKFTGEGATAHLETGGFIRSGHGVQHPDIQFHFLPSQVTDHGRVTPTEEAYQVHVGPMRPTSVGWLKLRSANPKDHPILEPNYLSTESDIREIRQSVKLSRELFAQKAFDKYRGPEITPGSHVQSDKEIDAFVRESADSAYHPSCTCRMGQASDPMAVVDPETRVIGLENLRVVDSSIMPSVVSGNLNSPTIMLAEKAADIIRGRPALCDKHVPVYNPKS
SIO_010081: chdh
subclass of: SO_0000673
so part of: chdh
location: complement(join(1060809..1061212,1062201..1062303,1065075..1065217,1067236..1067370,1074575..1074704,1078853..1079004,1089490..1090189))
location: region:1060809-1090189:-1
so has part: feature:1089490-1090189:-1:exon
so has part: feature:1078853-1079004:-1:exon
so has part: feature:1074575-1074704:-1:exon
so has part: feature:1067236-1067370:-1:exon
so has part: feature:1065075-1065217:-1:exon
so has part: feature:1062201-1062303:-1:exon
so has part: feature:1060809-1061212:-1:exon

XP_032892440.1
type: Protein
SIO_000068: ncbiprotein

position:1060809:-1
position: 1060809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090189:-1
position: 1090189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089490-1090189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078853-1079004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074575-1074704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067236-1067370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1065075-1065217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1062201-1062303:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1060809-1061212:-1:exon

chdh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: chdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline dehydrogenase, mitochondrial
translation: MNRLIGFAKTNAASVLVTRSLQQQNFKMLSKNYASKTPAYNYVIVGAGSAGCVLANRLTEDSGDSVLLLEAGPKDTLLNSKRLLWKIHMPAALIYNLCDDKYNWYYHTTAQRHMNNRMMYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWQKQGATGWDYDHCLPYFRKAQCHELGADRYRGGDGPLHVSRTKTKHPLHLAFLEAGQQAGYPFTDDMNGFQQEGVGWMDMTIYKGQRWSAASAYLRPSISRSNLTTEVKTFVTKILFDGTKAIGVEYVQGGLTKKVYAVKEVILSGGSINSPQLLLLSGVGNADDLKALGIPVVCHRPGVGQNLQDHLELYVQQQCNKPITLYKSQKPIKMIQIGLEWLWKFTGEGATAHLETGGFIRSGHGVQHPDIQFHFLPSQVTDHGRVTPTEEAYQVHVGPMRPTSVGWLKLRSANPKDHPILEPNYLSTESDIREIRQSVKLSRELFAQKAFDKYRGPEITPGSHVQSDKEIDAFVRESADSAYHPSCTCRMGQASDPMAVVDPETRVIGLENLRVVDSSIMPSVVSGNLNSPTIMLAEKAADIIRGRPALCDKHVPVYNPKS
SIO_010081: chdh
subclass of: SO_0000673
so part of: chdh
location: complement(join(1060809..1061212,1062201..1062303,1065075..1065217,1067236..1067370,1074575..1074704,1078853..1079004,1089490..1090189))
location: region:1060809-1090189:-1
so has part: feature:1089490-1090189:-1:exon
so has part: feature:1078853-1079004:-1:exon
so has part: feature:1074575-1074704:-1:exon
so has part: feature:1067236-1067370:-1:exon
so has part: feature:1065075-1065217:-1:exon
so has part: feature:1062201-1062303:-1:exon
so has part: feature:1060809-1061212:-1:exon

XP_032892442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1089490-1090189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078853-1079004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074575-1074704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067236-1067370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1065075-1065217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1062201-1062303:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1060809-1061212:-1:exon

il17rb
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: il17rb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1113192..1146114
location: region:1113192-1146114:1
so has part: feature:1113192-1146114:1:exon
subclass of: SO_0000010

116983030
type: Gene
SIO_000068: ncbigene

position:1113192:1
position: 1113192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146114:1
position: 1146114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113192-1146114:1:exon

il17rb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: il17rb
product: interleukin 17 receptor B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033036552.1
SIO_010081: il17rb
subclass of: SO_0000673
so part of: il17rb
location: join(1113192..1113449,1119175..1119312,1122286..1122398,1123616..1123742,1125021..1125062,1128397..1128551,1129805..1129993,1130130..1130205,1138011..1138034,1140016..1140093,1142662..1142760,1144554..1146114)
location: region:1113192-1146114:1
so has part: feature:1113192-1113449:1:exon
so has part: feature:1119175-1119312:1:exon
so has part: feature:1122286-1122398:1:exon
so has part: feature:1123616-1123742:1:exon
so has part: feature:1125021-1125062:1:exon
so has part: feature:1128397-1128551:1:exon
so has part: feature:1129805-1129993:1:exon
so has part: feature:1130130-1130205:1:exon
so has part: feature:1138011-1138034:1:exon
so has part: feature:1140016-1140093:1:exon
so has part: feature:1142662-1142760:1:exon
so has part: feature:1144554-1146114:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1113192-1113449:1:exon

position:1113449:1
position: 1113449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1119175-1119312:1:exon

position:1119175:1
position: 1119175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119312:1
position: 1119312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1122286-1122398:1:exon

position:1122286:1
position: 1122286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122398:1
position: 1122398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1123616-1123742:1:exon

position:1123616:1
position: 1123616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123742:1
position: 1123742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1125021-1125062:1:exon

position:1125021:1
position: 1125021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125062:1
position: 1125062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1128397-1128551:1:exon

position:1128397:1
position: 1128397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128551:1
position: 1128551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1129805-1129993:1:exon

position:1129805:1
position: 1129805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129993:1
position: 1129993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1130130-1130205:1:exon

position:1130130:1
position: 1130130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130205:1
position: 1130205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1138011-1138034:1:exon

position:1138011:1
position: 1138011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138034:1
position: 1138034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1140016-1140093:1:exon

position:1140016:1
position: 1140016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140093:1
position: 1140093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1142662-1142760:1:exon

position:1142662:1
position: 1142662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142760:1
position: 1142760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1144554-1146114:1:exon

position:1144554:1
position: 1144554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

il17rb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: il17rb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-17 receptor B isoform X1
translation: MAETWASFRAMNQSLVTIRSQIKATAFPCRTSPCVAEDQSASAQRGHGDSRASYPALPNQPGPGRPLHVGSTPPSEWYVEHNSTPSDIYEIKAQLHMSEESQLPMLNITWVLNDDGSIQVLEATVICIENILFCLQCNYDESFTSIRNPQNQRWHFHYMDYPVDPNIFYTVSAYSIPTANINEDAPTKSASFVSPGCDDATMRNHKYCEDYLWQSNVSACLANTDVVINFTTNANSLRYDVRLTKCDDYLSAMLNHTKVFQAKVLEKLSWCSSIYGAKEMGNVLDQNPSSDFKIISSIQSNESRISITFMRNTGLNLSEKFCVGIKPYYHHCSNLCTVHEKLLQPCTTVERTDNEGNGYFLILIGLCAVLFVLACGLFLICKRVMKSRAKSQRARDFNCHMFRKPNSEVLTCSSVTGQADEKKASIAVAEPLQPITVLIIYSADNELFQTVVGAFADFLHSVNGIQVVVDIWQSRSVAEMGPAQWLTVQRDKADKIIIIISSSARERSSYSGDMYSMALNIFCSDLQKYSHLHKYCIVYFDAISSAKDIPSIYCPCLKFCLEKDINKLLRHLHGPSRGTHSKRPTQWPAYTHRVSYNHKMENVILKIKDMQNAQPASNIHG
SIO_010081: il17rb
subclass of: SO_0000673
so part of: il17rb
location: join(1113242..1113449,1119175..1119312,1122286..1122398,1123616..1123742,1125021..1125062,1128397..1128551,1129805..1129993,1130130..1130205,1138011..1138034,1140016..1140093,1142662..1142760,1144554..1145170)
location: region:1113242-1145170:1
so has part: feature:1113242-1113449:1:exon
so has part: feature:1119175-1119312:1:exon
so has part: feature:1122286-1122398:1:exon
so has part: feature:1123616-1123742:1:exon
so has part: feature:1125021-1125062:1:exon
so has part: feature:1128397-1128551:1:exon
so has part: feature:1129805-1129993:1:exon
so has part: feature:1130130-1130205:1:exon
so has part: feature:1138011-1138034:1:exon
so has part: feature:1140016-1140093:1:exon
so has part: feature:1142662-1142760:1:exon
so has part: feature:1144554-1145170:1:exon

XP_032892443.1
type: Protein
SIO_000068: ncbiprotein

position:1113242:1
position: 1113242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145170:1
position: 1145170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113242-1113449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1119175-1119312:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1122286-1122398:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1123616-1123742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1125021-1125062:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1128397-1128551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129805-1129993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130130-1130205:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1138011-1138034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1140016-1140093:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1142662-1142760:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1144554-1145170:1:exon

il17rb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: il17rb
product: interleukin 17 receptor B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033036553.1
SIO_010081: il17rb
subclass of: SO_0000673
so part of: il17rb
location: join(1113256..1113449,1117716..1117737,1119175..1119312,1122286..1122398,1123616..1123742,1125021..1125062,1128397..1128551,1129805..1129993,1130130..1130205,1133328..1133336,1138011..1138034,1140016..1140093,1142662..1142760,1144554..1146114)
location: region:1113256-1146114:1
so has part: feature:1113256-1113449:1:exon
so has part: feature:1117716-1117737:1:exon
so has part: feature:1119175-1119312:1:exon
so has part: feature:1122286-1122398:1:exon
so has part: feature:1123616-1123742:1:exon
so has part: feature:1125021-1125062:1:exon
so has part: feature:1128397-1128551:1:exon
so has part: feature:1129805-1129993:1:exon
so has part: feature:1130130-1130205:1:exon
so has part: feature:1133328-1133336:1:exon
so has part: feature:1138011-1138034:1:exon
so has part: feature:1140016-1140093:1:exon
so has part: feature:1142662-1142760:1:exon
so has part: feature:1144554-1146114:1:exon

position:1113256:1
position: 1113256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113256-1113449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1117716-1117737:1:exon

position:1117716:1
position: 1117716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1117737:1
position: 1117737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1119175-1119312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1122286-1122398:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1123616-1123742:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1125021-1125062:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1128397-1128551:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129805-1129993:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130130-1130205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1133328-1133336:1:exon

position:1133328:1
position: 1133328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133336:1
position: 1133336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1138011-1138034:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1140016-1140093:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1142662-1142760:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1144554-1146114:1:exon

il17rb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: il17rb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-17 receptor B isoform X2
translation: MATAAHRILLYLTNLALAVHSMSVTCIRVRCSTPPSEWYVEHNSTPSDIYEIKAQLHMSEESQLPMLNITWVLNDDGSIQVLEATVICIENILFCLQCNYDESFTSIRNPQNQRWHFHYMDYPVDPNIFYTVSAYSIPTANINEDAPTKSASFVSPGCDDATMRNHKYCEDYLWQSNVSACLANTDVVINFTTNANSLRYDVRLTKCDDYLSAMLNHTKVFQAKVLEKLSWCSSIYGAKEMGNVLDQNPSSDFKIISSIQSNESRISITFMRNTGLNLSEKFCVGIKPYYHHCSNLCTVHEKLLQPCTTVVGMQRTDNEGNGYFLILIGLCAVLFVLACGLFLICKRVMKSRAKSQRARDFNCHMFRKPNSEVLTCSSVTGQADEKKASIAVAEPLQPITVLIIYSADNELFQTVVGAFADFLHSVNGIQVVVDIWQSRSVAEMGPAQWLTVQRDKADKIIIIISSSARERSSYSGDMYSMALNIFCSDLQKYSHLHKYCIVYFDAISSAKDIPSIYCPCLKFCLEKDINKLLRHLHGPSRGTHSKRPTQWPAYTHRVSYNHKMENVILKIKDMQNAQPASNIHG
SIO_010081: il17rb
subclass of: SO_0000673
so part of: il17rb
location: join(1113381..1113449,1117716..1117737,1119175..1119312,1122286..1122398,1123616..1123742,1125021..1125062,1128397..1128551,1129805..1129993,1130130..1130205,1133328..1133336,1138011..1138034,1140016..1140093,1142662..1142760,1144554..1145170)
location: region:1113381-1145170:1
so has part: feature:1113381-1113449:1:exon
so has part: feature:1117716-1117737:1:exon
so has part: feature:1119175-1119312:1:exon
so has part: feature:1122286-1122398:1:exon
so has part: feature:1123616-1123742:1:exon
so has part: feature:1125021-1125062:1:exon
so has part: feature:1128397-1128551:1:exon
so has part: feature:1129805-1129993:1:exon
so has part: feature:1130130-1130205:1:exon
so has part: feature:1133328-1133336:1:exon
so has part: feature:1138011-1138034:1:exon
so has part: feature:1140016-1140093:1:exon
so has part: feature:1142662-1142760:1:exon
so has part: feature:1144554-1145170:1:exon

XP_032892444.1
type: Protein
SIO_000068: ncbiprotein

position:1113381:1
position: 1113381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113381-1113449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1117716-1117737:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1119175-1119312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1122286-1122398:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1123616-1123742:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1125021-1125062:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1128397-1128551:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1129805-1129993:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130130-1130205:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1133328-1133336:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1138011-1138034:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1140016-1140093:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1142662-1142760:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1144554-1145170:1:exon

actr8
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: actr8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1148972..1163318)
location: region:1148972-1163318:-1
so has part: feature:1148972-1163318:-1:exon
subclass of: SO_0000010

116983031
type: Gene
SIO_000068: ncbigene

position:1148972:-1
position: 1148972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163318:-1
position: 1163318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1148972-1163318:-1:exon

actr8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: actr8
product: actin related protein 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033036556.1
SIO_010081: actr8
subclass of: SO_0000673
so part of: actr8
location: complement(join(1148972..1149547,1150262..1150425,1151637..1151895,1152104..1152244,1154200..1154295,1154745..1154953,1157339..1157432,1158441..1158614,1159506..1159610,1160289..1160399,1162027..1162197,1162958..1163318))
location: region:1148972-1163318:-1
so has part: feature:1162958-1163318:-1:exon
so has part: feature:1162027-1162197:-1:exon
so has part: feature:1160289-1160399:-1:exon
so has part: feature:1159506-1159610:-1:exon
so has part: feature:1158441-1158614:-1:exon
so has part: feature:1157339-1157432:-1:exon
so has part: feature:1154745-1154953:-1:exon
so has part: feature:1154200-1154295:-1:exon
so has part: feature:1152104-1152244:-1:exon
so has part: feature:1151637-1151895:-1:exon
so has part: feature:1150262-1150425:-1:exon
so has part: feature:1148972-1149547:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1162958-1163318:-1:exon

position:1162958:-1
position: 1162958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1162027-1162197:-1:exon

position:1162027:-1
position: 1162027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162197:-1
position: 1162197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1160289-1160399:-1:exon

position:1160289:-1
position: 1160289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160399:-1
position: 1160399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1159506-1159610:-1:exon

position:1159506:-1
position: 1159506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159610:-1
position: 1159610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1158441-1158614:-1:exon

position:1158441:-1
position: 1158441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158614:-1
position: 1158614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1157339-1157432:-1:exon

position:1157339:-1
position: 1157339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157432:-1
position: 1157432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1154745-1154953:-1:exon

position:1154745:-1
position: 1154745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154953:-1
position: 1154953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1154200-1154295:-1:exon

position:1154200:-1
position: 1154200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154295:-1
position: 1154295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1152104-1152244:-1:exon

position:1152104:-1
position: 1152104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152244:-1
position: 1152244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1151637-1151895:-1:exon

position:1151637:-1
position: 1151637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151895:-1
position: 1151895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1150262-1150425:-1:exon

position:1150262:-1
position: 1150262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150425:-1
position: 1150425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1148972-1149547:-1:exon

position:1149547:-1
position: 1149547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

actr8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: actr8
product: actin related protein 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033036554.1
SIO_010081: actr8
subclass of: SO_0000673
so part of: actr8
location: complement(join(1148972..1149547,1150262..1150425,1151637..1151895,1152104..1152244,1154200..1154295,1154745..1154898,1156557..1156689,1157339..1157432,1158441..1158614,1159506..1159610,1160289..1160399,1162027..1162197,1162958..1163064,1163157..1163316))
location: region:1148972-1163316:-1
so has part: feature:1163157-1163316:-1:exon
so has part: feature:1162958-1163064:-1:exon
so has part: feature:1162027-1162197:-1:exon
so has part: feature:1160289-1160399:-1:exon
so has part: feature:1159506-1159610:-1:exon
so has part: feature:1158441-1158614:-1:exon
so has part: feature:1157339-1157432:-1:exon
so has part: feature:1156557-1156689:-1:exon
so has part: feature:1154745-1154898:-1:exon
so has part: feature:1154200-1154295:-1:exon
so has part: feature:1152104-1152244:-1:exon
so has part: feature:1151637-1151895:-1:exon
so has part: feature:1150262-1150425:-1:exon
so has part: feature:1148972-1149547:-1:exon

position:1163316:-1
position: 1163316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1163157-1163316:-1:exon

position:1163157:-1
position: 1163157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1162958-1163064:-1:exon

position:1163064:-1
position: 1163064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1162027-1162197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1160289-1160399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1159506-1159610:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1158441-1158614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1157339-1157432:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1156557-1156689:-1:exon

position:1156557:-1
position: 1156557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156689:-1
position: 1156689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1154745-1154898:-1:exon

position:1154898:-1
position: 1154898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1154200-1154295:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1152104-1152244:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1151637-1151895:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1150262-1150425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1148972-1149547:-1:exon

actr8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: actr8
product: actin related protein 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033036555.1
SIO_010081: actr8
subclass of: SO_0000673
so part of: actr8
location: complement(join(1148972..1149547,1150262..1150425,1151637..1151895,1152104..1152244,1154200..1154295,1154745..1154898,1156557..1156689,1157339..1157432,1158441..1158614,1159506..1159610,1160289..1160399,1162027..1162197,1162958..1163073,1163129..1163316))
location: region:1148972-1163316:-1
so has part: feature:1163129-1163316:-1:exon
so has part: feature:1162958-1163073:-1:exon
so has part: feature:1162027-1162197:-1:exon
so has part: feature:1160289-1160399:-1:exon
so has part: feature:1159506-1159610:-1:exon
so has part: feature:1158441-1158614:-1:exon
so has part: feature:1157339-1157432:-1:exon
so has part: feature:1156557-1156689:-1:exon
so has part: feature:1154745-1154898:-1:exon
so has part: feature:1154200-1154295:-1:exon
so has part: feature:1152104-1152244:-1:exon
so has part: feature:1151637-1151895:-1:exon
so has part: feature:1150262-1150425:-1:exon
so has part: feature:1148972-1149547:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1163129-1163316:-1:exon

position:1163129:-1
position: 1163129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1162958-1163073:-1:exon

position:1163073:-1
position: 1163073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1162027-1162197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1160289-1160399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1159506-1159610:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1158441-1158614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1157339-1157432:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1156557-1156689:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1154745-1154898:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1154200-1154295:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1152104-1152244:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1151637-1151895:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1150262-1150425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1148972-1149547:-1:exon

actr8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: actr8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 8 isoform X2
translation: MTQVEAENGKEREKEQRGVKRPIVPAGIPESVLEPIQSNFIVVIHAGSSTLRIGRAADTLPVGIPHVIARRHKKQGQPHYEDPWLHRDGLNKPESNEQRLNGLKMVDQAIWSKKMSNGARRIPAPPDQVRAYNKQMRPAVLDANSGVKWTDTSLQPEFLVGEEALYVKPTDCYNIHWPVRRGQFNLHTGPGGSLSALLADLEAIWTLAIQKYLEIPSKDLKYYRCILLIPDIYNRQHVKELVNLLLNNIGFSASQGVLMLTLTERWCLPDRLRLAYGGADVTRCYYWLMQRSGFPYRECQVFSRMDSLLLQLLKETFCHLDQDISGIQDHEFKIRHPDCPALLYQLRLGDEKLQAPMALFYPATFGIVGQKITTLQHRSHGDSEDPHDEQYLVATQSKQEQAAKAIAERKALAKYAGFEAELGAPNCDGVEKSHELELASSQHDCVLVGNDSEDLPAALMARKTTVSQFEGKALGLDKSILHSIDCCGSDETKKKMYSSILVVGGGLMFQGAQEFLQHRILNKMPPSFRRIVENVEVLTRPKDMDARLIAWKGGAVLACLDTTQELWIHQREWQRFGVRMLRERAPFVW
SIO_010081: actr8
subclass of: SO_0000673
so part of: actr8
location: complement(join(1149404..1149547,1150262..1150425,1151637..1151895,1152104..1152244,1154200..1154295,1154745..1154953,1157339..1157432,1158441..1158614,1159506..1159610,1160289..1160399,1162027..1162197,1162958..1163059))
location: region:1149404-1163059:-1
so has part: feature:1162958-1163059:-1:exon
so has part: feature:1162027-1162197:-1:exon
so has part: feature:1160289-1160399:-1:exon
so has part: feature:1159506-1159610:-1:exon
so has part: feature:1158441-1158614:-1:exon
so has part: feature:1157339-1157432:-1:exon
so has part: feature:1154745-1154953:-1:exon
so has part: feature:1154200-1154295:-1:exon
so has part: feature:1152104-1152244:-1:exon
so has part: feature:1151637-1151895:-1:exon
so has part: feature:1150262-1150425:-1:exon
so has part: feature:1149404-1149547:-1:exon

XP_032892447.1
type: Protein
SIO_000068: ncbiprotein

position:1149404:-1
position: 1149404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163059:-1
position: 1163059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1162958-1163059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1162027-1162197:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160289-1160399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1159506-1159610:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1158441-1158614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1157339-1157432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1154745-1154953:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1154200-1154295:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1152104-1152244:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1151637-1151895:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1150262-1150425:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1149404-1149547:-1:exon

actr8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: actr8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 8 isoform X1
translation: MTQVEAENGKEREKEQRGVKRPIVPAGIPESVLEPIQSNFIVVIHAGSSTLRIGRAADTLPVGIPHVIARRHKKQGQPHYEDPWLHRDGLNKPESNEQRLNGLKMVDQAIWSKKMSNGARRIPAPPDQVRAYNKQMRPAVLDANSGVKWTDTSLQPEFLVGEEALYVKPTDCYNIHWPVRRGQFNLHTGPGGSLSALLADLEAIWTLAIQKYLEIPSKDLKYYRCILLIPDIYNRQHVKELVNLLLNNIGFSGVIVQQESICATFGSGLSSACVVDVGEQKTSVCCVEDGVSHRNTRLRLAYGGADVTRCYYWLMQRSGFPYRECQVFSRMDSLLLQLLKETFCHLDQDISGIQDHEFKIRHPDCPALLYQLRLGDEKLQAPMALFYPATFGIVGQKITTLQHRSHGDSEDPHDEQYLVATQSKQEQAAKAIAERKALAKYAGFEAELGAPNCDGVEKSHELELASSQHDCVLVGNDSEDLPAALMARKTTVSQFEGKALGLDKSILHSIDCCGSDETKKKMYSSILVVGGGLMFQGAQEFLQHRILNKMPPSFRRIVENVEVLTRPKDMDARLIAWKGGAVLACLDTTQELWIHQREWQRFGVRMLRERAPFVW
SIO_010081: actr8
subclass of: SO_0000673
so part of: actr8
location: complement(join(1149404..1149547,1150262..1150425,1151637..1151895,1152104..1152244,1154200..1154295,1154745..1154898,1156557..1156689,1157339..1157432,1158441..1158614,1159506..1159610,1160289..1160399,1162027..1162197,1162958..1163059))
location: region:1149404-1163059:-1
so has part: feature:1162958-1163059:-1:exon
so has part: feature:1162027-1162197:-1:exon
so has part: feature:1160289-1160399:-1:exon
so has part: feature:1159506-1159610:-1:exon
so has part: feature:1158441-1158614:-1:exon
so has part: feature:1157339-1157432:-1:exon
so has part: feature:1156557-1156689:-1:exon
so has part: feature:1154745-1154898:-1:exon
so has part: feature:1154200-1154295:-1:exon
so has part: feature:1152104-1152244:-1:exon
so has part: feature:1151637-1151895:-1:exon
so has part: feature:1150262-1150425:-1:exon
so has part: feature:1149404-1149547:-1:exon

XP_032892445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1162958-1163059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1162027-1162197:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160289-1160399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1159506-1159610:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1158441-1158614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1157339-1157432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1156557-1156689:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1154745-1154898:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1154200-1154295:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1152104-1152244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1151637-1151895:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1150262-1150425:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1149404-1149547:-1:exon

actr8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: actr8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 8 isoform X1
translation: MTQVEAENGKEREKEQRGVKRPIVPAGIPESVLEPIQSNFIVVIHAGSSTLRIGRAADTLPVGIPHVIARRHKKQGQPHYEDPWLHRDGLNKPESNEQRLNGLKMVDQAIWSKKMSNGARRIPAPPDQVRAYNKQMRPAVLDANSGVKWTDTSLQPEFLVGEEALYVKPTDCYNIHWPVRRGQFNLHTGPGGSLSALLADLEAIWTLAIQKYLEIPSKDLKYYRCILLIPDIYNRQHVKELVNLLLNNIGFSGVIVQQESICATFGSGLSSACVVDVGEQKTSVCCVEDGVSHRNTRLRLAYGGADVTRCYYWLMQRSGFPYRECQVFSRMDSLLLQLLKETFCHLDQDISGIQDHEFKIRHPDCPALLYQLRLGDEKLQAPMALFYPATFGIVGQKITTLQHRSHGDSEDPHDEQYLVATQSKQEQAAKAIAERKALAKYAGFEAELGAPNCDGVEKSHELELASSQHDCVLVGNDSEDLPAALMARKTTVSQFEGKALGLDKSILHSIDCCGSDETKKKMYSSILVVGGGLMFQGAQEFLQHRILNKMPPSFRRIVENVEVLTRPKDMDARLIAWKGGAVLACLDTTQELWIHQREWQRFGVRMLRERAPFVW
SIO_010081: actr8
subclass of: SO_0000673
so part of: actr8
location: complement(join(1149404..1149547,1150262..1150425,1151637..1151895,1152104..1152244,1154200..1154295,1154745..1154898,1156557..1156689,1157339..1157432,1158441..1158614,1159506..1159610,1160289..1160399,1162027..1162197,1162958..1163059))
location: region:1149404-1163059:-1
so has part: feature:1162958-1163059:-1:exon
so has part: feature:1162027-1162197:-1:exon
so has part: feature:1160289-1160399:-1:exon
so has part: feature:1159506-1159610:-1:exon
so has part: feature:1158441-1158614:-1:exon
so has part: feature:1157339-1157432:-1:exon
so has part: feature:1156557-1156689:-1:exon
so has part: feature:1154745-1154898:-1:exon
so has part: feature:1154200-1154295:-1:exon
so has part: feature:1152104-1152244:-1:exon
so has part: feature:1151637-1151895:-1:exon
so has part: feature:1150262-1150425:-1:exon
so has part: feature:1149404-1149547:-1:exon

XP_032892446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1162958-1163059:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1162027-1162197:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160289-1160399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1159506-1159610:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1158441-1158614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1157339-1157432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1156557-1156689:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1154745-1154898:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1154200-1154295:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1152104-1152244:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1151637-1151895:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1150262-1150425:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1149404-1149547:-1:exon

selenok
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: selenok
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1165438..1175757)
location: region:1165438-1175757:-1
so has part: feature:1165438-1175757:-1:exon
subclass of: SO_0000010

116983032
type: Gene
SIO_000068: ncbigene

position:1165438:-1
position: 1165438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175757:-1
position: 1175757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165438-1175757:-1:exon

selenok
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: selenok
product: selenoprotein K
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033036557.1
SIO_010081: selenok
subclass of: SO_0000673
so part of: selenok
location: complement(join(1165438..1165781,1166759..1166845,1171992..1172078,1172238..1172328,1175623..1175757))
location: region:1165438-1175757:-1
so has part: feature:1175623-1175757:-1:exon
so has part: feature:1172238-1172328:-1:exon
so has part: feature:1171992-1172078:-1:exon
so has part: feature:1166759-1166845:-1:exon
so has part: feature:1165438-1165781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1175623-1175757:-1:exon

position:1175623:-1
position: 1175623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1172238-1172328:-1:exon

position:1172238:-1
position: 1172238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172328:-1
position: 1172328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1171992-1172078:-1:exon

position:1171992:-1
position: 1171992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172078:-1
position: 1172078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1166759-1166845:-1:exon

position:1166759:-1
position: 1166759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166845:-1
position: 1166845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1165438-1165781:-1:exon

position:1165781:-1
position: 1165781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

selenok
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: selenok
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenoprotein K
translation: MVYVADGQVVDNRSQAPWRLSSIVQFFWGIVEFVAFFFRTLFNPSGAESKRTGNQSSWGRPDDGRGPPGVPRRRMGRINQGGGPAAPPMSGG
SIO_010081: selenok
subclass of: SO_0000673
so part of: selenok
location: complement(join(1166764..1166845,1171992..1172078,1172238..1172328,1175623..1175641))
location: region:1166764-1175641:-1
so has part: feature:1175623-1175641:-1:exon
so has part: feature:1172238-1172328:-1:exon
so has part: feature:1171992-1172078:-1:exon
so has part: feature:1166764-1166845:-1:exon

XP_032892448.1
type: Protein
SIO_000068: ncbiprotein

position:1166764:-1
position: 1166764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175641:-1
position: 1175641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1175623-1175641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1172238-1172328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1171992-1172078:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1166764-1166845:-1:exon

cacna2d3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: cacna2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1209824..1647119
location: region:1209824-1647119:1
so has part: feature:1209824-1647119:1:exon
subclass of: SO_0000010

116983035
type: Gene
SIO_000068: ncbigene

position:1209824:1
position: 1209824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1647119:1
position: 1647119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209824-1647119:1:exon

cacna2d3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cacna2d3
product: calcium voltage-gated channel auxiliary subunit alpha2delta 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033036559.1
SIO_010081: cacna2d3
subclass of: SO_0000673
so part of: cacna2d3
location: join(1209824..1210312,1210685..1210766,1307951..1308067,1349829..1349888,1374939..1375101,1400545..1400676,1409869..1409929,1410668..1410818,1414199..1414268,1424727..1424731,1441815..1441904,1453600..1453713,1472320..1472398,1478593..1478726,1482682..1482699,1487360..1487431,1488008..1488088,1488787..1488861,1510365..1510448,1514465..1514536,1515472..1515533,1515639..1515706,1518877..1518922,1523334..1523431,1524408..1524501,1526649..1526744,1541878..1541999,1547495..1547575,1568460..1568521,1574246..1574290,1574632..1574694,1582007..1582077,1584284..1584359,1588275..1588327,1594590..1594645,1606548..1606659,1640961..1641070,1644094..1644176,1646164..1647119)
location: region:1209824-1647119:1
so has part: feature:1209824-1210312:1:exon
so has part: feature:1210685-1210766:1:exon
so has part: feature:1307951-1308067:1:exon
so has part: feature:1349829-1349888:1:exon
so has part: feature:1374939-1375101:1:exon
so has part: feature:1400545-1400676:1:exon
so has part: feature:1409869-1409929:1:exon
so has part: feature:1410668-1410818:1:exon
so has part: feature:1414199-1414268:1:exon
so has part: feature:1424727-1424731:1:exon
so has part: feature:1441815-1441904:1:exon
so has part: feature:1453600-1453713:1:exon
so has part: feature:1472320-1472398:1:exon
so has part: feature:1478593-1478726:1:exon
so has part: feature:1482682-1482699:1:exon
so has part: feature:1487360-1487431:1:exon
so has part: feature:1488008-1488088:1:exon
so has part: feature:1488787-1488861:1:exon
so has part: feature:1510365-1510448:1:exon
so has part: feature:1514465-1514536:1:exon
so has part: feature:1515472-1515533:1:exon
so has part: feature:1515639-1515706:1:exon
so has part: feature:1518877-1518922:1:exon
so has part: feature:1523334-1523431:1:exon
so has part: feature:1524408-1524501:1:exon
so has part: feature:1526649-1526744:1:exon
so has part: feature:1541878-1541999:1:exon
so has part: feature:1547495-1547575:1:exon
so has part: feature:1568460-1568521:1:exon
so has part: feature:1574246-1574290:1:exon
so has part: feature:1574632-1574694:1:exon
so has part: feature:1582007-1582077:1:exon
so has part: feature:1584284-1584359:1:exon
so has part: feature:1588275-1588327:1:exon
so has part: feature:1594590-1594645:1:exon
so has part: feature:1606548-1606659:1:exon
so has part: feature:1640961-1641070:1:exon
so has part: feature:1644094-1644176:1:exon
so has part: feature:1646164-1647119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1209824-1210312:1:exon

position:1210312:1
position: 1210312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1210685-1210766:1:exon

position:1210685:1
position: 1210685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1210766:1
position: 1210766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1307951-1308067:1:exon

position:1307951:1
position: 1307951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1308067:1
position: 1308067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1349829-1349888:1:exon

position:1349829:1
position: 1349829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349888:1
position: 1349888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1374939-1375101:1:exon

position:1374939:1
position: 1374939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1375101:1
position: 1375101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1400545-1400676:1:exon

position:1400545:1
position: 1400545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400676:1
position: 1400676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1409869-1409929:1:exon

position:1409869:1
position: 1409869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1409929:1
position: 1409929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1410668-1410818:1:exon

position:1410668:1
position: 1410668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1410818:1
position: 1410818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1414199-1414268:1:exon

position:1414199:1
position: 1414199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414268:1
position: 1414268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1424727-1424731:1:exon

position:1424727:1
position: 1424727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424731:1
position: 1424731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1441815-1441904:1:exon

position:1441815:1
position: 1441815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441904:1
position: 1441904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1453600-1453713:1:exon

position:1453600:1
position: 1453600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453713:1
position: 1453713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1472320-1472398:1:exon

position:1472320:1
position: 1472320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472398:1
position: 1472398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1478593-1478726:1:exon

position:1478593:1
position: 1478593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1478726:1
position: 1478726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1482682-1482699:1:exon

position:1482682:1
position: 1482682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1482699:1
position: 1482699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1487360-1487431:1:exon

position:1487360:1
position: 1487360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1487431:1
position: 1487431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1488008-1488088:1:exon

position:1488008:1
position: 1488008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1488088:1
position: 1488088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1488787-1488861:1:exon

position:1488787:1
position: 1488787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1488861:1
position: 1488861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1510365-1510448:1:exon

position:1510365:1
position: 1510365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1510448:1
position: 1510448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1514465-1514536:1:exon

position:1514465:1
position: 1514465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514536:1
position: 1514536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1515472-1515533:1:exon

position:1515472:1
position: 1515472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515533:1
position: 1515533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1515639-1515706:1:exon

position:1515639:1
position: 1515639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515706:1
position: 1515706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1518877-1518922:1:exon

position:1518877:1
position: 1518877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518922:1
position: 1518922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1523334-1523431:1:exon

position:1523334:1
position: 1523334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1523431:1
position: 1523431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1524408-1524501:1:exon

position:1524408:1
position: 1524408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1524501:1
position: 1524501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1526649-1526744:1:exon

position:1526649:1
position: 1526649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1526744:1
position: 1526744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1541878-1541999:1:exon

position:1541878:1
position: 1541878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1541999:1
position: 1541999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1547495-1547575:1:exon

position:1547495:1
position: 1547495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1547575:1
position: 1547575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1568460-1568521:1:exon

position:1568460:1
position: 1568460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1568521:1
position: 1568521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1574246-1574290:1:exon

position:1574246:1
position: 1574246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574290:1
position: 1574290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1574632-1574694:1:exon

position:1574632:1
position: 1574632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574694:1
position: 1574694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1582007-1582077:1:exon

position:1582007:1
position: 1582007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582077:1
position: 1582077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1584284-1584359:1:exon

position:1584284:1
position: 1584284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584359:1
position: 1584359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1588275-1588327:1:exon

position:1588275:1
position: 1588275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588327:1
position: 1588327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1594590-1594645:1:exon

position:1594590:1
position: 1594590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594645:1
position: 1594645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1606548-1606659:1:exon

position:1606548:1
position: 1606548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1606659:1
position: 1606659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1640961-1641070:1:exon

position:1640961:1
position: 1640961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1641070:1
position: 1641070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1644094-1644176:1:exon

position:1644094:1
position: 1644094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1644176:1
position: 1644176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1646164-1647119:1:exon

position:1646164:1
position: 1646164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cacna2d3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cacna2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel subunit alpha-2/delta-3
translation: MSERPPPAARGRRMRSAALPPLCRASLLLCTVFSNARGHSKETQPIPLNVVKLWASAFGGEIKSISAKYSGSQFLQKKYKEHEKSVMVKEIDGFQLVKKLAKDMEQMFHNKAEAVRRLVEAAENAHLQHEYNSDLEYEYFNAVLINEKDESGSYVELGKEFILEPNEHFNNLPVNISLSAVQIPTNKYNKDPAIVNGVFWSEALNKVFVDNFERDPSLIWQYFGSANGFFRQYPGIKWEPDENGVIAFDCRTRKWYIQAATSPKDVIILVDVSGSMKGLRMTIAKQTVSSILDTLGDDDFFNIIAYNEDIHYVEPCLNNTLVQADRTTKEHFREHLDTLNAKGIGMLGFALAEAFILLNQFNGTGQGSSCSQAIMLVTDGAVDTYDTVFAKYNWPDRKVRIFAYLIGRETVFSENLKWMACANKGYFTQISTLADVQENVMEYLHVLSRPKVIDQEHDIVWTEAYVDSTLPLAKQLPFDSQRVLMTTIAMPVFSKKNETRTQGILLGVVGTDVPVKELVKVIPKYKLGIHGYAFAITNNGLVLTHPDLRPPYEEGRRRRKPSYKSVDLSELEWADVDNILRNDMVSRNTGKFSMEVKKTVEKGNRVLVMTNDYYYTDIKGTPFSLGVALSRGHGKYFLQGNVTLEEGLHDLDHPDLTLMEEWIYCDTDLHPQYRNLLQLEAVKLFLSGKEPLLQCDKELIQEVLFDAVVSAPLEAYWTSLALNRSENADKGVEVSFLGTRSGLTRVNLFVGPEQRSDQDFLSPQDKENIFTADHFPLWYRKSAEQLPGTFVYSIPFRPEAENKSSVVTASTSVQLVDNRKSPVVAAVGIQMKLEFFQKKFWTASRQCASLDGKCSISCDDEIINCYLIDNNGFILVSENLDETGTFFGKVEGAVMNKLMMMGSFKRVTLYDYQAVCRSAVDNSGSAPSLLDPYYVFFAAVKWIMTELILFLVEFNLCSWWNSDFTVQAQRWKQVLQPCGTEYAAFLSERTIKETMGAISCDACHKSFVIQQIPSSNLFMVVVDASCDCNIGPVTMDPIEIIYNESKKCDTLRSRKIRRRPDSCHPFHAEENARECGDGLALQPCPAVLMLSLILALCQR
SIO_010081: cacna2d3
subclass of: SO_0000673
so part of: cacna2d3
location: join(1210164..1210312,1210685..1210766,1307951..1308067,1349829..1349888,1374939..1375101,1400545..1400676,1409869..1409929,1410668..1410818,1414199..1414268,1424727..1424731,1441815..1441904,1453600..1453713,1472320..1472398,1478593..1478726,1482682..1482699,1487360..1487431,1488008..1488088,1488787..1488861,1510365..1510448,1514465..1514536,1515472..1515533,1515639..1515706,1518877..1518922,1523334..1523431,1524408..1524501,1526649..1526744,1541878..1541999,1547495..1547575,1568460..1568521,1574246..1574290,1574632..1574694,1582007..1582077,1584284..1584359,1588275..1588327,1594590..1594645,1606548..1606659,1640961..1641070,1644094..1644176,1646164..1646256)
location: region:1210164-1646256:1
so has part: feature:1210164-1210312:1:exon
so has part: feature:1210685-1210766:1:exon
so has part: feature:1307951-1308067:1:exon
so has part: feature:1349829-1349888:1:exon
so has part: feature:1374939-1375101:1:exon
so has part: feature:1400545-1400676:1:exon
so has part: feature:1409869-1409929:1:exon
so has part: feature:1410668-1410818:1:exon
so has part: feature:1414199-1414268:1:exon
so has part: feature:1424727-1424731:1:exon
so has part: feature:1441815-1441904:1:exon
so has part: feature:1453600-1453713:1:exon
so has part: feature:1472320-1472398:1:exon
so has part: feature:1478593-1478726:1:exon
so has part: feature:1482682-1482699:1:exon
so has part: feature:1487360-1487431:1:exon
so has part: feature:1488008-1488088:1:exon
so has part: feature:1488787-1488861:1:exon
so has part: feature:1510365-1510448:1:exon
so has part: feature:1514465-1514536:1:exon
so has part: feature:1515472-1515533:1:exon
so has part: feature:1515639-1515706:1:exon
so has part: feature:1518877-1518922:1:exon
so has part: feature:1523334-1523431:1:exon
so has part: feature:1524408-1524501:1:exon
so has part: feature:1526649-1526744:1:exon
so has part: feature:1541878-1541999:1:exon
so has part: feature:1547495-1547575:1:exon
so has part: feature:1568460-1568521:1:exon
so has part: feature:1574246-1574290:1:exon
so has part: feature:1574632-1574694:1:exon
so has part: feature:1582007-1582077:1:exon
so has part: feature:1584284-1584359:1:exon
so has part: feature:1588275-1588327:1:exon
so has part: feature:1594590-1594645:1:exon
so has part: feature:1606548-1606659:1:exon
so has part: feature:1640961-1641070:1:exon
so has part: feature:1644094-1644176:1:exon
so has part: feature:1646164-1646256:1:exon

XP_032892450.1
type: Protein
SIO_000068: ncbiprotein

position:1210164:1
position: 1210164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1646256:1
position: 1646256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1210164-1210312:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1210685-1210766:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1307951-1308067:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1349829-1349888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1374939-1375101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1400545-1400676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1409869-1409929:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1410668-1410818:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1414199-1414268:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1424727-1424731:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1441815-1441904:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1453600-1453713:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1472320-1472398:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1478593-1478726:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1482682-1482699:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1487360-1487431:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1488008-1488088:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1488787-1488861:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1510365-1510448:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1514465-1514536:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1515472-1515533:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1515639-1515706:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1518877-1518922:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1523334-1523431:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1524408-1524501:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1526649-1526744:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1541878-1541999:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1547495-1547575:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1568460-1568521:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1574246-1574290:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1574632-1574694:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1582007-1582077:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1584284-1584359:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1588275-1588327:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1594590-1594645:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1606548-1606659:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1640961-1641070:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1644094-1644176:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1646164-1646256:1:exon

lrtm1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: lrtm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1554233..1560667)
location: region:1554233-1560667:-1
so has part: feature:1554233-1560667:-1:exon
subclass of: SO_0000010

116983033
type: Gene
SIO_000068: ncbigene

position:1554233:-1
position: 1554233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1560667:-1
position: 1560667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1554233-1560667:-1:exon

lrtm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: lrtm1
product: leucine rich repeats and transmembrane domains 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_033036558.1
SIO_010081: lrtm1
subclass of: SO_0000673
so part of: lrtm1
location: complement(join(1554233..1554794,1558905..1559501,1560232..1560667))
location: region:1554233-1560667:-1
so has part: feature:1560232-1560667:-1:exon
so has part: feature:1558905-1559501:-1:exon
so has part: feature:1554233-1554794:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1560232-1560667:-1:exon

position:1560232:-1
position: 1560232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1558905-1559501:-1:exon

position:1558905:-1
position: 1558905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1559501:-1
position: 1559501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1554233-1554794:-1:exon

position:1554794:-1
position: 1554794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

lrtm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: lrtm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and transmembrane domain-containing protein 1
translation: MLQMYSNWSGSVLSQGKENDKLETMRGDIALGMIAFLFVQSVTGCPEKCQCMETEKVVRCTGTGLSQVPRGIALNTEALYLQNNQIHTISNADFTGMLQLQTLDLSNNIISNLSSDTFDGLHNLLILNLANNSITNVDNKMLHSTGNLHQLDLSFNHLTSLPEGLFNNLQNLTSLAMHQNQLQHISRSLVDSLPSLQAILFRKNQWKCDCHLTGLKLWLESFLYTGGKIDEILCTEPEDLRSKDLMRIPHELFQVCSSIKDKSSHVDSDQRSPTIQTLQHKLEPEHSPDCTPKAKQRSGSLRHAIATIVVTGVICGIVCLMMLVAAVYGCSYAFIMAKYQRELKKLDHLGPDVEQENAEEKEPLDSSLV
SIO_010081: lrtm1
subclass of: SO_0000673
so part of: lrtm1
location: complement(join(1554361..1554794,1558905..1559501,1560232..1560310))
location: region:1554361-1560310:-1
so has part: feature:1560232-1560310:-1:exon
so has part: feature:1558905-1559501:-1:exon
so has part: feature:1554361-1554794:-1:exon

XP_032892449.1
type: Protein
SIO_000068: ncbiprotein

position:1554361:-1
position: 1554361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1560310:-1
position: 1560310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560232-1560310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1558905-1559501:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1554361-1554794:-1:exon

wnt5a
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: wnt5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1764492..1816496)
location: region:1764492-1816496:-1
so has part: feature:1764492-1816496:-1:exon
subclass of: SO_0000010

116983036
type: Gene
SIO_000068: ncbigene

position:1764492:-1
position: 1764492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1816496:-1
position: 1816496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1764492-1816496:-1:exon

wnt5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wnt5a
product: Wnt family member 5A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 118 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033036561.1
SIO_010081: wnt5a
subclass of: SO_0000673
so part of: wnt5a
location: complement(join(1764492..1765348,1793157..1793449,1798691..1798938,1801181..1801311,1815670..1816496))
location: region:1764492-1816496:-1
so has part: feature:1815670-1816496:-1:exon
so has part: feature:1801181-1801311:-1:exon
so has part: feature:1798691-1798938:-1:exon
so has part: feature:1793157-1793449:-1:exon
so has part: feature:1764492-1765348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1815670-1816496:-1:exon

position:1815670:-1
position: 1815670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1801181-1801311:-1:exon

position:1801181:-1
position: 1801181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1801311:-1
position: 1801311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1798691-1798938:-1:exon

position:1798691:-1
position: 1798691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1798938:-1
position: 1798938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1793157-1793449:-1:exon

position:1793157:-1
position: 1793157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1793449:-1
position: 1793449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1764492-1765348:-1:exon

position:1765348:-1
position: 1765348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

wnt5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wnt5a
product: Wnt family member 5A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 118 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033036560.1
SIO_010081: wnt5a
subclass of: SO_0000673
so part of: wnt5a
location: complement(join(1764492..1765348,1793157..1793449,1798691..1798938,1801181..1801311,1805621..1806081))
location: region:1764492-1806081:-1
so has part: feature:1805621-1806081:-1:exon
so has part: feature:1801181-1801311:-1:exon
so has part: feature:1798691-1798938:-1:exon
so has part: feature:1793157-1793449:-1:exon
so has part: feature:1764492-1765348:-1:exon

position:1806081:-1
position: 1806081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1805621-1806081:-1:exon

position:1805621:-1
position: 1805621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1801181-1801311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1798691-1798938:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1793157-1793449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1764492-1765348:-1:exon

wnt5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wnt5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-5a isoform X2
translation: MRGAAEVAHRALESALKGTMALTSLLLALTFLSGCKQAVVEANSWWSLAMNPIQIPEVYIIGAQPLCSQLAGLSQGQKKLCQLYRDHMQYIGEGAKTGIKECQHQFRHRRWNCSTVDNTSVFGRVMQIGSRETAFTYGVSAAGVVHAISRACREGELATCGCSRAARPKDLPRDWLWGGCGDNVEYGYRFAKEFVDAREREKIYQKGTYDSARTFMNLHNNEAGRRTVYNLADVACKCHGVSGSCSLKTCWLQLADFRKVGDSLKEKYDSATAMKLNGRGKLVQVNSRFNPPTTLDLVYVDQSPDYCLRNQTTGSLGTQGRLCNKTSEGMDGCALMCCGRGYDQFKTVRTERCHCKFHWCCYVKCKKCTEVVDQFVCK
SIO_010081: wnt5a
subclass of: SO_0000673
so part of: wnt5a
location: complement(join(1764890..1765348,1793157..1793449,1798691..1798938,1801181..1801311,1815670..1815675))
location: region:1764890-1815675:-1
so has part: feature:1815670-1815675:-1:exon
so has part: feature:1801181-1801311:-1:exon
so has part: feature:1798691-1798938:-1:exon
so has part: feature:1793157-1793449:-1:exon
so has part: feature:1764890-1765348:-1:exon

XP_032892452.1
type: Protein
SIO_000068: ncbiprotein

position:1764890:-1
position: 1764890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1815675:-1
position: 1815675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1815670-1815675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1801181-1801311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1798691-1798938:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1793157-1793449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1764890-1765348:-1:exon

wnt5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wnt5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-5a isoform X1
translation: MLGQFHTLTVNSRWAKYRNKLITNPKRRSFQVFVLSWNKLDIFWGAAEVAHRALESALKGTMALTSLLLALTFLSGCKQAVVEANSWWSLAMNPIQIPEVYIIGAQPLCSQLAGLSQGQKKLCQLYRDHMQYIGEGAKTGIKECQHQFRHRRWNCSTVDNTSVFGRVMQIGSRETAFTYGVSAAGVVHAISRACREGELATCGCSRAARPKDLPRDWLWGGCGDNVEYGYRFAKEFVDAREREKIYQKGTYDSARTFMNLHNNEAGRRTVYNLADVACKCHGVSGSCSLKTCWLQLADFRKVGDSLKEKYDSATAMKLNGRGKLVQVNSRFNPPTTLDLVYVDQSPDYCLRNQTTGSLGTQGRLCNKTSEGMDGCALMCCGRGYDQFKTVRTERCHCKFHWCCYVKCKKCTEVVDQFVCK
SIO_010081: wnt5a
subclass of: SO_0000673
so part of: wnt5a
location: complement(join(1764890..1765348,1793157..1793449,1798691..1798938,1801181..1801311,1805621..1805752))
location: region:1764890-1805752:-1
so has part: feature:1805621-1805752:-1:exon
so has part: feature:1801181-1801311:-1:exon
so has part: feature:1798691-1798938:-1:exon
so has part: feature:1793157-1793449:-1:exon
so has part: feature:1764890-1765348:-1:exon

XP_032892451.1
type: Protein
SIO_000068: ncbiprotein

position:1805752:-1
position: 1805752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1805621-1805752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1801181-1801311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1798691-1798938:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1793157-1793449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1764890-1765348:-1:exon

erc2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: erc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1840122..2409696)
location: region:1840122-2409696:-1
so has part: feature:1840122-2409696:-1:exon
subclass of: SO_0000010

116983037
type: Gene
SIO_000068: ncbigene

position:1840122:-1
position: 1840122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2409696:-1
position: 2409696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1840122-2409696:-1:exon

erc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: erc2
product: ELKS/RAB6-interacting/CAST family member 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033036569.1
SIO_010081: erc2
subclass of: SO_0000673
so part of: erc2
location: complement(join(1840122..1842366,1902212..1902215,1908069..1908262,1989549..1989674,1998137..1998284,2074250..2074410,2099420..2099555,2126572..2126765,2139110..2139250,2140329..2140469,2159936..2160073,2219246..2219413,2260623..2260790,2262120..2262275,2288588..2288662,2343653..2344069,2382456..2383275,2393346..2393531,2409622..2409696))
location: region:1840122-2409696:-1
so has part: feature:2409622-2409696:-1:exon
so has part: feature:2393346-2393531:-1:exon
so has part: feature:2382456-2383275:-1:exon
so has part: feature:2343653-2344069:-1:exon
so has part: feature:2288588-2288662:-1:exon
so has part: feature:2262120-2262275:-1:exon
so has part: feature:2260623-2260790:-1:exon
so has part: feature:2219246-2219413:-1:exon
so has part: feature:2159936-2160073:-1:exon
so has part: feature:2140329-2140469:-1:exon
so has part: feature:2139110-2139250:-1:exon
so has part: feature:2126572-2126765:-1:exon
so has part: feature:2099420-2099555:-1:exon
so has part: feature:2074250-2074410:-1:exon
so has part: feature:1998137-1998284:-1:exon
so has part: feature:1989549-1989674:-1:exon
so has part: feature:1908069-1908262:-1:exon
so has part: feature:1902212-1902215:-1:exon
so has part: feature:1840122-1842366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2409622-2409696:-1:exon

position:2409622:-1
position: 2409622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2393346-2393531:-1:exon

position:2393346:-1
position: 2393346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2393531:-1
position: 2393531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2382456-2383275:-1:exon

position:2382456:-1
position: 2382456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2383275:-1
position: 2383275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2343653-2344069:-1:exon

position:2343653:-1
position: 2343653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2344069:-1
position: 2344069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2288588-2288662:-1:exon

position:2288588:-1
position: 2288588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2288662:-1
position: 2288662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2262120-2262275:-1:exon

position:2262120:-1
position: 2262120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2262275:-1
position: 2262275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2260623-2260790:-1:exon

position:2260623:-1
position: 2260623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2260790:-1
position: 2260790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2219246-2219413:-1:exon

position:2219246:-1
position: 2219246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2219413:-1
position: 2219413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2159936-2160073:-1:exon

position:2159936:-1
position: 2159936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2160073:-1
position: 2160073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2140329-2140469:-1:exon

position:2140329:-1
position: 2140329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2140469:-1
position: 2140469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2139110-2139250:-1:exon

position:2139110:-1
position: 2139110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2139250:-1
position: 2139250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2126572-2126765:-1:exon

position:2126572:-1
position: 2126572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2126765:-1
position: 2126765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2099420-2099555:-1:exon

position:2099420:-1
position: 2099420
reference: sequence
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erc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: erc2
product: ELKS/RAB6-interacting/CAST family member 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033036567.1
SIO_010081: erc2
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erc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: erc2
product: ELKS/RAB6-interacting/CAST family member 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033036568.1
SIO_010081: erc2
subclass of: SO_0000673
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erc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: erc2
product: ELKS/RAB6-interacting/CAST family member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033036566.1
SIO_010081: erc2
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erc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: erc2
product: ELKS/RAB6-interacting/CAST family member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033036565.1
SIO_010081: erc2
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erc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: erc2
product: ELKS/RAB6-interacting/CAST family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033036564.1
SIO_010081: erc2
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urn:…
SIO_000300: 17
SIO_000628: feature:2074250-2074410:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1998137-1998284:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1989549-1989674:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1908069-1908262:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1902212-1902215:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1840122-1842366:-1:exon

erc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: erc2
product: ELKS/RAB6-interacting/CAST family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033036563.1
SIO_010081: erc2
subclass of: SO_0000673
so part of: erc2
location: complement(join(1840122..1842366,1902212..1902215,1908069..1908262,1989549..1989674,1998137..1998284,2074250..2074410,2086499..2086630,2099420..2099555,2117831..2117842,2126572..2126765,2127120..2127149,2139110..2139250,2140329..2140469,2159936..2160073,2219246..2219413,2260623..2260790,2262120..2262275,2288588..2288662,2343653..2344069,2346078..2346101,2382456..2383275,2393346..2393531,2409622..2409696))
location: region:1840122-2409696:-1
so has part: feature:2409622-2409696:-1:exon
so has part: feature:2393346-2393531:-1:exon
so has part: feature:2382456-2383275:-1:exon
so has part: feature:2346078-2346101:-1:exon
so has part: feature:2343653-2344069:-1:exon
so has part: feature:2288588-2288662:-1:exon
so has part: feature:2262120-2262275:-1:exon
so has part: feature:2260623-2260790:-1:exon
so has part: feature:2219246-2219413:-1:exon
so has part: feature:2159936-2160073:-1:exon
so has part: feature:2140329-2140469:-1:exon
so has part: feature:2139110-2139250:-1:exon
so has part: feature:2127120-2127149:-1:exon
so has part: feature:2126572-2126765:-1:exon
so has part: feature:2117831-2117842:-1:exon
so has part: feature:2099420-2099555:-1:exon
so has part: feature:2086499-2086630:-1:exon
so has part: feature:2074250-2074410:-1:exon
so has part: feature:1998137-1998284:-1:exon
so has part: feature:1989549-1989674:-1:exon
so has part: feature:1908069-1908262:-1:exon
so has part: feature:1902212-1902215:-1:exon
so has part: feature:1840122-1842366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2409622-2409696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2393346-2393531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2382456-2383275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2346078-2346101:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2343653-2344069:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2288588-2288662:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2262120-2262275:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2260623-2260790:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2219246-2219413:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2159936-2160073:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2140329-2140469:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2139110-2139250:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2127120-2127149:-1:exon

position:2127120:-1
position: 2127120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2127149:-1
position: 2127149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2126572-2126765:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2117831-2117842:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2099420-2099555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2086499-2086630:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2074250-2074410:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1998137-1998284:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1989549-1989674:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1908069-1908262:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1902212-1902215:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1840122-1842366:-1:exon

erc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: erc2
product: ELKS/RAB6-interacting/CAST family member 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033036570.1
SIO_010081: erc2
subclass of: SO_0000673
so part of: erc2
location: complement(join(1908069..1908262,1974890..1974955,1989549..1989674,1998137..1998284,2074250..2074410,2086499..2086630,2099420..2099555,2126572..2126765,2139110..2139250,2140329..2140469,2159936..2160073,2219246..2219413,2260623..2260790,2262120..2262275,2288588..2288662,2343653..2344069,2382456..2383275,2393346..2393531,2409622..2409696))
location: region:1908069-2409696:-1
so has part: feature:2409622-2409696:-1:exon
so has part: feature:2393346-2393531:-1:exon
so has part: feature:2382456-2383275:-1:exon
so has part: feature:2343653-2344069:-1:exon
so has part: feature:2288588-2288662:-1:exon
so has part: feature:2262120-2262275:-1:exon
so has part: feature:2260623-2260790:-1:exon
so has part: feature:2219246-2219413:-1:exon
so has part: feature:2159936-2160073:-1:exon
so has part: feature:2140329-2140469:-1:exon
so has part: feature:2139110-2139250:-1:exon
so has part: feature:2126572-2126765:-1:exon
so has part: feature:2099420-2099555:-1:exon
so has part: feature:2086499-2086630:-1:exon
so has part: feature:2074250-2074410:-1:exon
so has part: feature:1998137-1998284:-1:exon
so has part: feature:1989549-1989674:-1:exon
so has part: feature:1974890-1974955:-1:exon
so has part: feature:1908069-1908262:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2409622-2409696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2393346-2393531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2382456-2383275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2343653-2344069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2288588-2288662:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2262120-2262275:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2260623-2260790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2219246-2219413:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2159936-2160073:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2140329-2140469:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2139110-2139250:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2126572-2126765:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2099420-2099555:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2086499-2086630:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2074250-2074410:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1998137-1998284:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1989549-1989674:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1974890-1974955:-1:exon

position:1974890:-1
position: 1974890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1974955:-1
position: 1974955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1908069-1908262:-1:exon

erc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: erc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ERC protein 2 isoform X7
translation: MYGSSRTVGHVEGSPSRSPRLPRSPRLGHRRTNSSGTGGAGKTLSMENIQSMNAAYATSGPMYLSDHEGVASTSFPKGTMTLGRATNRATYGGRVTAMGSSPNIASAGLPPGVDALSFADHHHHPPAHLVTPSPHHHHHHLHQVPSSTLRQVRDSTLIDLQVQLKDLQRENDTLRKELDIKDTKLGSSMNSIKTFWSPELKKERVLRKEEAARMSLLREQMRVSHEESQHLQLTIQALQDELRTQRDLNHLLQQENVSRGAEHYTIELTEENFRRLQAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQNKGLPSKSMEEEHERNRRISEAESQVNHLEVILDQKEKENIHLREELHRRSSLQPETAKTKALQTVIEMKDTKAASLERNIRDLEDEIQMLKTNGALSIGDREEELKQMEVYKSHSKFMKNKIDQLKQDLSKKESELLALQTKLETLNNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLKDKDKQLNNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERGDRERLEEVESYKKENKDLKEKINNLQAELAEKESSLIDLKEHASSLASTGLKKDSRLKTLEIAIEQKKEECSKLEAQLKKAHDAEDGTRLNPEICEKMRQLEKDVVYYKGESDKCQAEVDRLLEILKEVETEKNDRDKKIAELERQVKDQSKKVANLKHKEQMEKKKNAQLLEEARKREDNLTDNSQHMELEELMATLERTRQELDSTKVRLTSTQQSLAEREAHLTNLRVERRKQLEEVLEMKQEALLAAISEKDANIALLELSASKKKKTQDEVIALKREKDRLVQQLKQQTQNRMKLMADNYDDDHHHHHHHHHHRTPARSQHPNHRPSPDQMIQSLLEASNQRIKLKVYIDYLPAHPLPGAELHKSWHDCHLYQSQRKRAMKFPGSISCRV
SIO_010081: erc2
subclass of: SO_0000673
so part of: erc2
location: complement(join(1908080..1908262,1989549..1989674,1998137..1998284,2074250..2074410,2099420..2099555,2126572..2126765,2139110..2139250,2140329..2140469,2159936..2160073,2219246..2219413,2260623..2260790,2262120..2262275,2288588..2288662,2343653..2344069,2382456..2383142))
location: region:1908080-2383142:-1
so has part: feature:2382456-2383142:-1:exon
so has part: feature:2343653-2344069:-1:exon
so has part: feature:2288588-2288662:-1:exon
so has part: feature:2262120-2262275:-1:exon
so has part: feature:2260623-2260790:-1:exon
so has part: feature:2219246-2219413:-1:exon
so has part: feature:2159936-2160073:-1:exon
so has part: feature:2140329-2140469:-1:exon
so has part: feature:2139110-2139250:-1:exon
so has part: feature:2126572-2126765:-1:exon
so has part: feature:2099420-2099555:-1:exon
so has part: feature:2074250-2074410:-1:exon
so has part: feature:1998137-1998284:-1:exon
so has part: feature:1989549-1989674:-1:exon
so has part: feature:1908080-1908262:-1:exon

XP_032892460.1
type: Protein
SIO_000068: ncbiprotein

position:1908080:-1
position: 1908080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2383142:-1
position: 2383142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2382456-2383142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2343653-2344069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2288588-2288662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2262120-2262275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2260623-2260790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2219246-2219413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2159936-2160073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2140329-2140469:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2139110-2139250:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2126572-2126765:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2099420-2099555:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2074250-2074410:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1998137-1998284:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1989549-1989674:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1908080-1908262:-1:exon

erc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: erc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ERC protein 2 isoform X5
translation: MYGSSRTVGHVEGSPSRSPRLPRSPRLGHRRTNSSGTGGAGKTLSMENIQSMNAAYATSGPMYLSDHEGVASTSFPKGTMTLGRATNRATYGGRVTAMGSSPNIASAGLPPGVDALSFADHHHHPPAHLVTPSPHHHHHHLHQVPSSTLRQVRDSTLIDLQVQLKDLQRENDTLRKELDIKDTKLGSSMNSIKTFWSPELKKERVLRKEEAARMSLLREQMRVSHEESQHLQLTIQALQDELRTQRDLNHLLQQENVSRGAEHYTIELTEENFRRLQAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQNKGLPSKSMEEEHERNRRISEAESQVNHLEVILDQKEKENIHLREELHRRSSLQPETAKTKALQTVIEMKDTKAASLERNIRDLEDEIQMLKTNGALSIGDREEELKQMEVYKSHSKFMKNKIDQLKQDLSKKESELLALQTKLETLNNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLKDKDKQLNNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERGDRERLEEVESYKKENKDLKEKINNLQAELAEKESSLIDLKEHASSLASTGLKKDSRLKTLEIAIEQKKEECSKLEAQLKKAHDAEDGTRLNPEICEKMRQLEKDVVYYKGESDKCQAEVDRLLEILKEVETEKNDRDKKIAELERQVKDQSKKVANLKHKEQMEKKKNAQLLEEARKREDNLTDNSQHMEESVEQKEERIEELEDALRECVQINAEREVVLAKGEASRSSSEKQLEELMATLERTRQELDSTKVRLTSTQQSLAEREAHLTNLRVERRKQLEEVLEMKQEALLAAISEKDANIALLELSASKKKKTQDEVIALKREKDRLVQQLKQQTQNRMKLMADNYDDDHHHHHHHHHHRTPARSQHPNHRPSPDQMIQSLLEASNQRIKLKVYIDYLPAHPLPGAELHKSWHDCHLYQSQRKRAMKFPGSISCRV
SIO_010081: erc2
subclass of: SO_0000673
so part of: erc2
location: complement(join(1908080..1908262,1989549..1989674,1998137..1998284,2074250..2074410,2086499..2086630,2099420..2099555,2126572..2126765,2139110..2139250,2140329..2140469,2159936..2160073,2219246..2219413,2260623..2260790,2262120..2262275,2288588..2288662,2343653..2344069,2382456..2383142))
location: region:1908080-2383142:-1
so has part: feature:2382456-2383142:-1:exon
so has part: feature:2343653-2344069:-1:exon
so has part: feature:2288588-2288662:-1:exon
so has part: feature:2262120-2262275:-1:exon
so has part: feature:2260623-2260790:-1:exon
so has part: feature:2219246-2219413:-1:exon
so has part: feature:2159936-2160073:-1:exon
so has part: feature:2140329-2140469:-1:exon
so has part: feature:2139110-2139250:-1:exon
so has part: feature:2126572-2126765:-1:exon
so has part: feature:2099420-2099555:-1:exon
so has part: feature:2086499-2086630:-1:exon
so has part: feature:2074250-2074410:-1:exon
so has part: feature:1998137-1998284:-1:exon
so has part: feature:1989549-1989674:-1:exon
so has part: feature:1908080-1908262:-1:exon

XP_032892458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2382456-2383142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2343653-2344069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2288588-2288662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2262120-2262275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2260623-2260790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2219246-2219413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2159936-2160073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2140329-2140469:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2139110-2139250:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2126572-2126765:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2099420-2099555:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2086499-2086630:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2074250-2074410:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1998137-1998284:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1989549-1989674:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1908080-1908262:-1:exon

erc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: erc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ERC protein 2 isoform X6
translation: MYGSSRTVGHVEGSPSRSPRLPRSPRLGHRRTNSSGTGGAGKTLSMENIQSMNAAYATSGPMYLSDHEGVASTSFPKGTMTLGRATNRATYGGRVTAMGSSPNIASAGLPPGVDALSFADHHHHPPAHLVTPSPHHHHHHLHQVPSSTLRQVRDSTLIDLQVQLKDLQRENDTLRKELDIKDTKLGSSMNSIKTFWSPELKKERVLRKEEAARMSLLREQMRVSHEESQHLQLTIQALQDELRTQRDLNHLLQQENVSRGAEHYTIELTEENFRRLQAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQNKGLPSKSMEEEHERNRRISEAESQVNHLEVILDQKEKENIHLREELHRRSSLQPETAKTKALQTVIEMKDTKAASLERNIRDLEDEIQMLKTNGALSIGDREEELKQMEVYKSHSKFMKNKIDQLKQDLSKKESELLALQTKLETLNNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLKDKDKQLNNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERGDRERLEEVESYKKENKDLKEKINNLQAELAEKESSLIDLKEHASSLASTGLKKDSRLKTLEIAIEQKKEECSKLEAQLKKAHDAEDGTRLNPEICEKMRQLEKDVVYYKGESDKCQAEVDRLLEILKEVETEKNDRDKKIAELESLASRQVKDQSKKVANLKHKEQMEKKKNAQLLEEARKREDNLTDNSQHMELEELMATLERTRQELDSTKVRLTSTQQSLAEREAHLTNLRVERRKQLEEVLEMKQEALLAAISEKDANIALLELSASKKKKTQDEVIALKREKDRLVQQLKQQTQNRMKLMADNYDDDHHHHHHHHHHRTPARSQHPNHRPSPDQMIQSLLEASNQRIKLKVYIDYLPAHPLPGAELHKSWHDCHLYQSQRKRAMKFPGSISCRV
SIO_010081: erc2
subclass of: SO_0000673
so part of: erc2
location: complement(join(1908080..1908262,1989549..1989674,1998137..1998284,2074250..2074410,2099420..2099555,2117831..2117842,2126572..2126765,2139110..2139250,2140329..2140469,2159936..2160073,2219246..2219413,2260623..2260790,2262120..2262275,2288588..2288662,2343653..2344069,2382456..2383142))
location: region:1908080-2383142:-1
so has part: feature:2382456-2383142:-1:exon
so has part: feature:2343653-2344069:-1:exon
so has part: feature:2288588-2288662:-1:exon
so has part: feature:2262120-2262275:-1:exon
so has part: feature:2260623-2260790:-1:exon
so has part: feature:2219246-2219413:-1:exon
so has part: feature:2159936-2160073:-1:exon
so has part: feature:2140329-2140469:-1:exon
so has part: feature:2139110-2139250:-1:exon
so has part: feature:2126572-2126765:-1:exon
so has part: feature:2117831-2117842:-1:exon
so has part: feature:2099420-2099555:-1:exon
so has part: feature:2074250-2074410:-1:exon
so has part: feature:1998137-1998284:-1:exon
so has part: feature:1989549-1989674:-1:exon
so has part: feature:1908080-1908262:-1:exon

XP_032892459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2382456-2383142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2343653-2344069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2288588-2288662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2262120-2262275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2260623-2260790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2219246-2219413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2159936-2160073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2140329-2140469:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2139110-2139250:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2126572-2126765:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2117831-2117842:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2099420-2099555:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2074250-2074410:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1998137-1998284:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1989549-1989674:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1908080-1908262:-1:exon

erc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: erc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ERC protein 2 isoform X4
translation: MYGSSRTVGHVEGSPSRSPRLPRSPRLGHRRTNSSGTGGAGKTLSMENIQSMNAAYATSGPMYLSDHEGVASTSFPKGTMTLGRATNRATYGGRVTAMGSSPNIASAGLPPGVDALSFADHHHHPPAHLVTPSPHHHHHHLHQVPSSTLRQVRDSTLIDLQVQLKDLQRENDTLRKELDIKDTKLGSSMNSIKTFWSPELKKERVLRKEEAARMSLLREQMRVSHEESQHLQLTIQALQDELRTQRDLNHLLQQENVSRGAEHYTIELTEENFRRLQAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQNKGLPSKSMEEEHERNRRISEAESQVNHLEVILDQKEKENIHLREELHRRSSLQPETAKTKALQTVIEMKDTKAASLERNIRDLEDEIQMLKTNGALSIGDREEELKQMEVYKSHSKFMKNKIDQLKQDLSKKESELLALQTKLETLNNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLKDKDKQLNNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERGDRERLEEVESYKKENKDLKEKINNLQAELAEKESSLIDLKEHASSLASTGLKKDSRLKTLEIAIEQKKEECSKLEAQLKKAHDAEDGTRLNPEICEKMRQLEKDVVYYKGESDKCQAEVDRLLEILKEVETEKNDRDKKIAELESLASRQVKDQSKKVANLKHKEQMEKKKNAQLLEEARKREDNLTDNSQHMEESVEQKEERIEELEDALRECVQINAEREVVLAKGEASRSSSEKQLEELMATLERTRQELDSTKVRLTSTQQSLAEREAHLTNLRVERRKQLEEVLEMKQEALLAAISEKDANIALLELSASKKKKTQDEVIALKREKDRLVQQLKQQTQNRMKLMADNYDDDHHHHHHHHHHRTPARSQHPNHRPSPDQMIQSLLEASNQRIKLKVYIDYLPAHPLPGAELHKSWHDCHLYQSQRKRAMKFPGSISCRV
SIO_010081: erc2
subclass of: SO_0000673
so part of: erc2
location: complement(join(1908080..1908262,1989549..1989674,1998137..1998284,2074250..2074410,2086499..2086630,2099420..2099555,2117831..2117842,2126572..2126765,2139110..2139250,2140329..2140469,2159936..2160073,2219246..2219413,2260623..2260790,2262120..2262275,2288588..2288662,2343653..2344069,2382456..2383142))
location: region:1908080-2383142:-1
so has part: feature:2382456-2383142:-1:exon
so has part: feature:2343653-2344069:-1:exon
so has part: feature:2288588-2288662:-1:exon
so has part: feature:2262120-2262275:-1:exon
so has part: feature:2260623-2260790:-1:exon
so has part: feature:2219246-2219413:-1:exon
so has part: feature:2159936-2160073:-1:exon
so has part: feature:2140329-2140469:-1:exon
so has part: feature:2139110-2139250:-1:exon
so has part: feature:2126572-2126765:-1:exon
so has part: feature:2117831-2117842:-1:exon
so has part: feature:2099420-2099555:-1:exon
so has part: feature:2086499-2086630:-1:exon
so has part: feature:2074250-2074410:-1:exon
so has part: feature:1998137-1998284:-1:exon
so has part: feature:1989549-1989674:-1:exon
so has part: feature:1908080-1908262:-1:exon

XP_032892457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2382456-2383142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2343653-2344069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2288588-2288662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2262120-2262275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2260623-2260790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2219246-2219413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2159936-2160073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2140329-2140469:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2139110-2139250:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2126572-2126765:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2117831-2117842:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2099420-2099555:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2086499-2086630:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2074250-2074410:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1998137-1998284:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1989549-1989674:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1908080-1908262:-1:exon

erc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: erc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ERC protein 2 isoform X3
translation: MYGSSRTVGHVEGSPSRSPRLPRSPRLGHRRTNSSGTGGAGKTLSMENIQSMNAAYATSGPMYLSDHEGVASTSFPKGTMTLGRATNRATYGGRVTAMGSSPNIASAGLPPGVDALSFADHHHHPPAHLVTPSPHHHHHHLHQVPSSTLRQVRDSTLIDLQVQLKDLQRENDTLRKELDIKDTKLGSSMNSIKTFWSPELKKERVLRKEEAARMSLLREQMRVSHEESQPLDARRSKHLQLTIQALQDELRTQRDLNHLLQQENVSRGAEHYTIELTEENFRRLQAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQNKGLPSKSMEEEHERNRRISEAESQVNHLEVILDQKEKENIHLREELHRRSSLQPETAKTKALQTVIEMKDTKAASLERNIRDLEDEIQMLKTNGALSIGDREEELKQMEVYKSHSKFMKNKIDQLKQDLSKKESELLALQTKLETLNNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLKDKDKQLNNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERGDRERLEEVESYKKENKDLKEKINNLQAELAEKESSLIDLKEHASSLASTGLKKDSRLKTLEIAIEQKKEECSKLEAQLKKAHDAEDGTRLNPEICEKMRQLEKDVVYYKGESDKCQAEVDRLLEILKEVETEKNDRDKKIAELERQVKDQSKKVANLKHKEQMEKKKNAQLLEEARKREDNLTDNSQHMEESVEQKEERIEELEDALRECVQINAEREVVLAKGEASRSSSEKQLEELMATLERTRQELDSTKVRLTSTQQSLAEREAHLTNLRVERRKQLEEVLEMKQEALLAAISEKDANIALLELSASKKKKTQDEVIALKREKDRLVQQLKQQTQNRMKLMADNYDDDHHHHHHHHHHRTPARSQHPNHRPSPDQMIQSLLEASNQRIKLKVYIDYLPAHPLPGAELHKSWHDCHLYQSQRKRAMKFPGSISCRV
SIO_010081: erc2
subclass of: SO_0000673
so part of: erc2
location: complement(join(1908080..1908262,1989549..1989674,1998137..1998284,2074250..2074410,2086499..2086630,2099420..2099555,2126572..2126765,2139110..2139250,2140329..2140469,2159936..2160073,2219246..2219413,2260623..2260790,2262120..2262275,2288588..2288662,2343653..2344069,2346078..2346101,2382456..2383142))
location: region:1908080-2383142:-1
so has part: feature:2382456-2383142:-1:exon
so has part: feature:2346078-2346101:-1:exon
so has part: feature:2343653-2344069:-1:exon
so has part: feature:2288588-2288662:-1:exon
so has part: feature:2262120-2262275:-1:exon
so has part: feature:2260623-2260790:-1:exon
so has part: feature:2219246-2219413:-1:exon
so has part: feature:2159936-2160073:-1:exon
so has part: feature:2140329-2140469:-1:exon
so has part: feature:2139110-2139250:-1:exon
so has part: feature:2126572-2126765:-1:exon
so has part: feature:2099420-2099555:-1:exon
so has part: feature:2086499-2086630:-1:exon
so has part: feature:2074250-2074410:-1:exon
so has part: feature:1998137-1998284:-1:exon
so has part: feature:1989549-1989674:-1:exon
so has part: feature:1908080-1908262:-1:exon

XP_032892456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2382456-2383142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2346078-2346101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2343653-2344069:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2288588-2288662:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2262120-2262275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2260623-2260790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2219246-2219413:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2159936-2160073:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2140329-2140469:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2139110-2139250:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2126572-2126765:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2099420-2099555:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2086499-2086630:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2074250-2074410:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1998137-1998284:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1989549-1989674:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1908080-1908262:-1:exon

erc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: erc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ERC protein 2 isoform X2
translation: MYGSSRTVGHVEGSPSRSPRLPRSPRLGHRRTNSSGTGGAGKTLSMENIQSMNAAYATSGPMYLSDHEGVASTSFPKGTMTLGRATNRATYGGRVTAMGSSPNIASAGLPPGVDALSFADHHHHPPAHLVTPSPHHHHHHLHQVPSSTLRQVRDSTLIDLQVQLKDLQRENDTLRKELDIKDTKLGSSMNSIKTFWSPELKKERVLRKEEAARMSLLREQMRVSHEESQPLDARRSKHLQLTIQALQDELRTQRDLNHLLQQENVSRGAEHYTIELTEENFRRLQAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQNKGLPSKSMEEEHERNRRISEAESQVNHLEVILDQKEKENIHLREELHRRSSLQPETAKTKALQTVIEMKDTKAASLERNIRDLEDEIQMLKTNGALSIGDREEELKQMEVYKSHSKFMKNKIDQLKQDLSKKESELLALQTKLETLNNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLKDKDKQLNNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERGDRERLEEVESYKKENKDLKEKINNLQAELAEKESSLIDLKEHASSLASTGLKKDSRLKTLEIAIEQKKEECSKLEAQLKKAHDAEDGTRLNPEICEKMRQLEKDVVYYKGESDKCQAEVDRLLEILKEVETEKNDRDKKIAELESLASRQVKDQSKKVANLKHKEQMEKKKNAQLLEEARKREDNLTDNSQHMEESVEQKEERIEELEDALRECVQINAEREVVLAKGEASRSSSEKQLEELMATLERTRQELDSTKVRLTSTQQSLAEREAHLTNLRVERRKQLEEVLEMKQEALLAAISEKDANIALLELSASKKKKTQDEVIALKREKDRLVQQLKQQTQNRMKLMADNYDDDHHHHHHHHHHRTPARSQHPNHRPSPDQMIQSLLEASNQRIKLKVYIDYLPAHPLPGAELHKSWHDCHLYQSQRKRAMKFPGSISCRV
SIO_010081: erc2
subclass of: SO_0000673
so part of: erc2
location: complement(join(1908080..1908262,1989549..1989674,1998137..1998284,2074250..2074410,2086499..2086630,2099420..2099555,2117831..2117842,2126572..2126765,2139110..2139250,2140329..2140469,2159936..2160073,2219246..2219413,2260623..2260790,2262120..2262275,2288588..2288662,2343653..2344069,2346078..2346101,2382456..2383142))
location: region:1908080-2383142:-1
so has part: feature:2382456-2383142:-1:exon
so has part: feature:2346078-2346101:-1:exon
so has part: feature:2343653-2344069:-1:exon
so has part: feature:2288588-2288662:-1:exon
so has part: feature:2262120-2262275:-1:exon
so has part: feature:2260623-2260790:-1:exon
so has part: feature:2219246-2219413:-1:exon
so has part: feature:2159936-2160073:-1:exon
so has part: feature:2140329-2140469:-1:exon
so has part: feature:2139110-2139250:-1:exon
so has part: feature:2126572-2126765:-1:exon
so has part: feature:2117831-2117842:-1:exon
so has part: feature:2099420-2099555:-1:exon
so has part: feature:2086499-2086630:-1:exon
so has part: feature:2074250-2074410:-1:exon
so has part: feature:1998137-1998284:-1:exon
so has part: feature:1989549-1989674:-1:exon
so has part: feature:1908080-1908262:-1:exon

XP_032892455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2382456-2383142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2346078-2346101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2343653-2344069:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2288588-2288662:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2262120-2262275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2260623-2260790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2219246-2219413:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2159936-2160073:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2140329-2140469:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2139110-2139250:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2126572-2126765:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2117831-2117842:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2099420-2099555:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2086499-2086630:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2074250-2074410:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1998137-1998284:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1989549-1989674:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1908080-1908262:-1:exon

erc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: erc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ERC protein 2 isoform X1
translation: MYGSSRTVGHVEGSPSRSPRLPRSPRLGHRRTNSSGTGGAGKTLSMENIQSMNAAYATSGPMYLSDHEGVASTSFPKGTMTLGRATNRATYGGRVTAMGSSPNIASAGLPPGVDALSFADHHHHPPAHLVTPSPHHHHHHLHQVPSSTLRQVRDSTLIDLQVQLKDLQRENDTLRKELDIKDTKLGSSMNSIKTFWSPELKKERVLRKEEAARMSLLREQMRVSHEESQPLDARRSKHLQLTIQALQDELRTQRDLNHLLQQENVSRGAEHYTIELTEENFRRLQAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQNKGLPSKSMEEEHERNRRISEAESQVNHLEVILDQKEKENIHLREELHRRSSLQPETAKTKALQTVIEMKDTKAASLERNIRDLEDEIQMLKTNGALSIGDREEELKQMEVYKSHSKFMKNKIDQLKQDLSKKESELLALQTKLETLNNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLKDKDKQLNNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERGDRERLEEVESYKKENKDLKEKINNLQAELAEKESSLIDLKEHASSLASTGLKKDSRLKTLEIAIEQKKEECSKLEAQLKKIPIRNYEENGAHDAEDGTRLNPEICEKMRQLEKDVVYYKGESDKCQAEVDRLLEILKEVETEKNDRDKKIAELESLASRQVKDQSKKVANLKHKEQMEKKKNAQLLEEARKREDNLTDNSQHMEESVEQKEERIEELEDALRECVQINAEREVVLAKGEASRSSSEKQLEELMATLERTRQELDSTKVRLTSTQQSLAEREAHLTNLRVERRKQLEEVLEMKQEALLAAISEKDANIALLELSASKKKKTQDEVIALKREKDRLVQQLKQQTQNRMKLMADNYDDDHHHHHHHHHHRTPARSQHPNHRPSPDQMIQSLLEASNQRIKLKVYIDYLPAHPLPGAELHKSWHDCHLYQSQRKRAMKFPGSISCRV
SIO_010081: erc2
subclass of: SO_0000673
so part of: erc2
location: complement(join(1908080..1908262,1989549..1989674,1998137..1998284,2074250..2074410,2086499..2086630,2099420..2099555,2117831..2117842,2126572..2126765,2127120..2127149,2139110..2139250,2140329..2140469,2159936..2160073,2219246..2219413,2260623..2260790,2262120..2262275,2288588..2288662,2343653..2344069,2346078..2346101,2382456..2383142))
location: region:1908080-2383142:-1
so has part: feature:2382456-2383142:-1:exon
so has part: feature:2346078-2346101:-1:exon
so has part: feature:2343653-2344069:-1:exon
so has part: feature:2288588-2288662:-1:exon
so has part: feature:2262120-2262275:-1:exon
so has part: feature:2260623-2260790:-1:exon
so has part: feature:2219246-2219413:-1:exon
so has part: feature:2159936-2160073:-1:exon
so has part: feature:2140329-2140469:-1:exon
so has part: feature:2139110-2139250:-1:exon
so has part: feature:2127120-2127149:-1:exon
so has part: feature:2126572-2126765:-1:exon
so has part: feature:2117831-2117842:-1:exon
so has part: feature:2099420-2099555:-1:exon
so has part: feature:2086499-2086630:-1:exon
so has part: feature:2074250-2074410:-1:exon
so has part: feature:1998137-1998284:-1:exon
so has part: feature:1989549-1989674:-1:exon
so has part: feature:1908080-1908262:-1:exon

XP_032892454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2382456-2383142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2346078-2346101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2343653-2344069:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2288588-2288662:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2262120-2262275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2260623-2260790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2219246-2219413:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2159936-2160073:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2140329-2140469:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2139110-2139250:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2127120-2127149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2126572-2126765:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2117831-2117842:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2099420-2099555:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2086499-2086630:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2074250-2074410:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1998137-1998284:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1989549-1989674:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1908080-1908262:-1:exon

LOC116983598
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116983598
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1922260..1922451
location: region:1922260-1922451:1
so has part: feature:1922260-1922451:1:exon
subclass of: SO_0000623

116983598
type: Gene
SIO_000068: ncbigene

position:1922260:1
position: 1922260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1922451:1
position: 1922451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1922260-1922451:1:exon

LOC116983598
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snRNA
gene: LOC116983598
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004414754.1
SIO_010081: LOC116983598
subclass of: SO_0000673
so part of: LOC116983598
location: 1922260..1922451
location: region:1922260-1922451:1
so has part: feature:1922260-1922451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1922260-1922451:1:exon

erc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: erc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ERC protein 2 isoform X8
translation: MYGSSRTVGHVEGSPSRSPRLPRSPRLGHRRTNSSGTGGAGKTLSMENIQSMNAAYATSGPMYLSDHEGVASTSFPKGTMTLGRATNRATYGGRVTAMGSSPNIASAGLPPGVDALSFADHHHHPPAHLVTPSPHHHHHHLHQVPSSTLRQVRDSTLIDLQVQLKDLQRENDTLRKELDIKDTKLGSSMNSIKTFWSPELKKERVLRKEEAARMSLLREQMRVSHEESQHLQLTIQALQDELRTQRDLNHLLQQENVSRGAEHYTIELTEENFRRLQAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQNKGLPSKSMEEEHERNRRISEAESQVNHLEVILDQKEKENIHLREELHRRSSLQPETAKTKALQTVIEMKDTKAASLERNIRDLEDEIQMLKTNGALSIGDREEELKQMEVYKSHSKFMKNKIDQLKQDLSKKESELLALQTKLETLNNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLKDKDKQLNNLKDRVKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERGDRERLEEVESYKKENKDLKEKINNLQAELAEKESSLIDLKEHASSLASTGLKKDSRLKTLEIAIEQKKEECSKLEAQLKKAHDAEDGTRLNPEICEKMRQLEKDVVYYKGESDKCQAEVDRLLEILKEVETEKNDRDKKIAELERQVKDQSKKVANLKHKEQMEKKKNAQLLEEARKREDNLTDNSQHMEESVEQKEERIEELEDALRECVQINAEREVVLAKGEASRSSSEKQLEELMATLERTRQELDSTKVRLTSTQQSLAEREAHLTNLRVERRKQLEEVLEMKQEALLAAISEKDANIALLELSASKKKKTQDEVIALKREKDRLVQQLKQQTQNRMKLMADNYDDDHHHHHHHHHHRTPARSQHPNHRPSPDQDDEEGIWA
SIO_010081: erc2
subclass of: SO_0000673
so part of: erc2
location: complement(join(1974929..1974955,1989549..1989674,1998137..1998284,2074250..2074410,2086499..2086630,2099420..2099555,2126572..2126765,2139110..2139250,2140329..2140469,2159936..2160073,2219246..2219413,2260623..2260790,2262120..2262275,2288588..2288662,2343653..2344069,2382456..2383142))
location: region:1974929-2383142:-1
so has part: feature:2382456-2383142:-1:exon
so has part: feature:2343653-2344069:-1:exon
so has part: feature:2288588-2288662:-1:exon
so has part: feature:2262120-2262275:-1:exon
so has part: feature:2260623-2260790:-1:exon
so has part: feature:2219246-2219413:-1:exon
so has part: feature:2159936-2160073:-1:exon
so has part: feature:2140329-2140469:-1:exon
so has part: feature:2139110-2139250:-1:exon
so has part: feature:2126572-2126765:-1:exon
so has part: feature:2099420-2099555:-1:exon
so has part: feature:2086499-2086630:-1:exon
so has part: feature:2074250-2074410:-1:exon
so has part: feature:1998137-1998284:-1:exon
so has part: feature:1989549-1989674:-1:exon
so has part: feature:1974929-1974955:-1:exon

XP_032892461.1
type: Protein
SIO_000068: ncbiprotein

position:1974929:-1
position: 1974929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2382456-2383142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2343653-2344069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2288588-2288662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2262120-2262275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2260623-2260790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2219246-2219413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2159936-2160073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2140329-2140469:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2139110-2139250:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2126572-2126765:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2099420-2099555:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2086499-2086630:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2074250-2074410:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1998137-1998284:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1989549-1989674:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1974929-1974955:-1:exon

ccdc66
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ccdc66
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2431943..2470543
location: region:2431943-2470543:1
so has part: feature:2431943-2470543:1:exon
subclass of: SO_0000010

116983038
type: Gene
SIO_000068: ncbigene

position:2431943:1
position: 2431943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2470543:1
position: 2470543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2431943-2470543:1:exon

ccdc66
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ccdc66
product: coiled-coil domain containing 66, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033036571.1
SIO_010081: ccdc66
subclass of: SO_0000673
so part of: ccdc66
location: join(2431943..2432586,2436712..2436776,2437011..2437036,2438351..2438774,2439802..2439997,2443481..2443596,2444053..2444195,2445065..2445244,2445658..2445789,2446928..2447184,2451493..2451577,2452326..2452487,2456970..2457114,2457234..2457359,2459259..2459791,2461254..2461312,2463683..2463915,2467611..2467744,2469661..2470543)
location: region:2431943-2470543:1
so has part: feature:2431943-2432586:1:exon
so has part: feature:2436712-2436776:1:exon
so has part: feature:2437011-2437036:1:exon
so has part: feature:2438351-2438774:1:exon
so has part: feature:2439802-2439997:1:exon
so has part: feature:2443481-2443596:1:exon
so has part: feature:2444053-2444195:1:exon
so has part: feature:2445065-2445244:1:exon
so has part: feature:2445658-2445789:1:exon
so has part: feature:2446928-2447184:1:exon
so has part: feature:2451493-2451577:1:exon
so has part: feature:2452326-2452487:1:exon
so has part: feature:2456970-2457114:1:exon
so has part: feature:2457234-2457359:1:exon
so has part: feature:2459259-2459791:1:exon
so has part: feature:2461254-2461312:1:exon
so has part: feature:2463683-2463915:1:exon
so has part: feature:2467611-2467744:1:exon
so has part: feature:2469661-2470543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2431943-2432586:1:exon

position:2432586:1
position: 2432586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2436712-2436776:1:exon

position:2436712:1
position: 2436712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2436776:1
position: 2436776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2437011-2437036:1:exon

position:2437011:1
position: 2437011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2437036:1
position: 2437036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2438351-2438774:1:exon

position:2438351:1
position: 2438351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438774:1
position: 2438774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2439802-2439997:1:exon

position:2439802:1
position: 2439802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2439997:1
position: 2439997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2443481-2443596:1:exon

position:2443481:1
position: 2443481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2443596:1
position: 2443596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2444053-2444195:1:exon

position:2444053:1
position: 2444053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2444195:1
position: 2444195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2445065-2445244:1:exon

position:2445065:1
position: 2445065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2445244:1
position: 2445244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2445658-2445789:1:exon

position:2445658:1
position: 2445658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2445789:1
position: 2445789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2446928-2447184:1:exon

position:2446928:1
position: 2446928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2447184:1
position: 2447184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2451493-2451577:1:exon

position:2451493:1
position: 2451493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2451577:1
position: 2451577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2452326-2452487:1:exon

position:2452326:1
position: 2452326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2452487:1
position: 2452487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2456970-2457114:1:exon

position:2456970:1
position: 2456970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2457114:1
position: 2457114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2457234-2457359:1:exon

position:2457234:1
position: 2457234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2457359:1
position: 2457359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2459259-2459791:1:exon

position:2459259:1
position: 2459259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2459791:1
position: 2459791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2461254-2461312:1:exon

position:2461254:1
position: 2461254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2461312:1
position: 2461312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2463683-2463915:1:exon

position:2463683:1
position: 2463683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2463915:1
position: 2463915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2467611-2467744:1:exon

position:2467611:1
position: 2467611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2467744:1
position: 2467744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2469661-2470543:1:exon

position:2469661:1
position: 2469661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ccdc66
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ccdc66
product: coiled-coil domain containing 66, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033036572.1
SIO_010081: ccdc66
subclass of: SO_0000673
so part of: ccdc66
location: join(2432423..2432586,2437011..2437036,2438351..2438774,2439802..2439997,2443481..2443596,2444053..2444195,2445065..2445244,2445658..2445789,2446928..2447184,2451493..2451577,2452326..2452487,2456970..2457114,2457234..2457359,2459259..2459791,2461254..2461312,2463683..2463915,2467611..2467744,2469661..2470543)
location: region:2432423-2470543:1
so has part: feature:2432423-2432586:1:exon
so has part: feature:2437011-2437036:1:exon
so has part: feature:2438351-2438774:1:exon
so has part: feature:2439802-2439997:1:exon
so has part: feature:2443481-2443596:1:exon
so has part: feature:2444053-2444195:1:exon
so has part: feature:2445065-2445244:1:exon
so has part: feature:2445658-2445789:1:exon
so has part: feature:2446928-2447184:1:exon
so has part: feature:2451493-2451577:1:exon
so has part: feature:2452326-2452487:1:exon
so has part: feature:2456970-2457114:1:exon
so has part: feature:2457234-2457359:1:exon
so has part: feature:2459259-2459791:1:exon
so has part: feature:2461254-2461312:1:exon
so has part: feature:2463683-2463915:1:exon
so has part: feature:2467611-2467744:1:exon
so has part: feature:2469661-2470543:1:exon

position:2432423:1
position: 2432423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2432423-2432586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2437011-2437036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2438351-2438774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2439802-2439997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2443481-2443596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2444053-2444195:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2445065-2445244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2445658-2445789:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2446928-2447184:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2451493-2451577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2452326-2452487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2456970-2457114:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2457234-2457359:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2459259-2459791:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2461254-2461312:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2463683-2463915:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2467611-2467744:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2469661-2470543:1:exon

ccdc66
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ccdc66
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 66 isoform X1
translation: MNLGDGLKLETQLLNGKPKLILAPFDVSSKETKKMKYKNRIIHPLKSKQILQVASPHENNSKNEKPLLKPIVTNTSVAPGKGESTELVTEKKADDKTKRNCETIPKNGQPGIKTSVKKLGITKQQPPKKQQITSDELRENLVCLTQEQLQQILASVGQANKSSNQKQERDKSTKPGKGAKETQATDEELKGDNPTSQNEVGCNNNKATRGNSSCRDSRASQTSGVVVAQANIIQTENTGNKAPLSSAIQTKDGLFGNLGERENSKEQLEAKRIQWKKELDEQVALKKQLQKNNEVSEFSEWNPWGKRDAGAPVRSNTKKILENIKGKSPVSSPAATGPHADGRVISTAPTVTNAPNTDVAPDGLIGKASSVSLSDLPAAIRSVFVLGDYAPRDHLLSAIKRDQQKKWLLELDKQREEDQNRRLKEKLEYSEGDNHSRWAMHFDSYQRKLPQPSPVSVNTGSILEKSAASGDGQANVLQLLPAQASPLPIQQSGSAGDGAALMNGDTPCDLSNAQKSSFLRSMTALLDPAEIEERDLRRQKQQEHQKAIAQQVEAKRRLKQLEEDNKRKEEQKEEQRLAKEREKLREQYDVETRTQRGKEELQTQNTNRLYEAMQKAQEEAKRQKQEQRIKDLVRKGHDISNLHKSVEGTTHEMGTCEIYNDLVYETVDEELGLDPLEEESPRKDRGIQTEDFEINGKAQRTMYNTQIRDRGQVSTTSNAAAEHNESNNMYAKKKSKPAEKAPPVTGKENYLQNDDLYNQFARMKKGKNEKRPEWNINITNKRYVPASQRYPRVMQVEREEKRMKRQMELLQLLEKNVPDQRPKKKPATKEQSSERLSSPVVPALQAKLQLATCPQLLDKQRLLAVRKEVPMKRNTSNHKLPVDKDYRCRSPPIPSLRNKQLQMVQEPRTVGNPAPSECCRWAPFANEAASDFVPYVRTDEVYHLDPDAPMSRPSTDDPQYKRSTVTVMDHLQCKADSADLPRDPLLNPDLLRNRERQQAILKSLSELRQGLMQKQRELETASPTH
SIO_010081: ccdc66
subclass of: SO_0000673
so part of: ccdc66
location: join(2432576..2432586,2436712..2436776,2437011..2437036,2438351..2438774,2439802..2439997,2443481..2443596,2444053..2444195,2445065..2445244,2445658..2445789,2446928..2447184,2451493..2451577,2452326..2452487,2456970..2457114,2457234..2457359,2459259..2459791,2461254..2461312,2463683..2463915,2467611..2467744,2469661..2469711)
location: region:2432576-2469711:1
so has part: feature:2432576-2432586:1:exon
so has part: feature:2436712-2436776:1:exon
so has part: feature:2437011-2437036:1:exon
so has part: feature:2438351-2438774:1:exon
so has part: feature:2439802-2439997:1:exon
so has part: feature:2443481-2443596:1:exon
so has part: feature:2444053-2444195:1:exon
so has part: feature:2445065-2445244:1:exon
so has part: feature:2445658-2445789:1:exon
so has part: feature:2446928-2447184:1:exon
so has part: feature:2451493-2451577:1:exon
so has part: feature:2452326-2452487:1:exon
so has part: feature:2456970-2457114:1:exon
so has part: feature:2457234-2457359:1:exon
so has part: feature:2459259-2459791:1:exon
so has part: feature:2461254-2461312:1:exon
so has part: feature:2463683-2463915:1:exon
so has part: feature:2467611-2467744:1:exon
so has part: feature:2469661-2469711:1:exon

XP_032892462.1
type: Protein
SIO_000068: ncbiprotein

position:2432576:1
position: 2432576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2469711:1
position: 2469711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2432576-2432586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2436712-2436776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2437011-2437036:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2438351-2438774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2439802-2439997:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2443481-2443596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2444053-2444195:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2445065-2445244:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2445658-2445789:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2446928-2447184:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2451493-2451577:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2452326-2452487:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2456970-2457114:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2457234-2457359:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2459259-2459791:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2461254-2461312:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2463683-2463915:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2467611-2467744:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2469661-2469711:1:exon

ccdc66
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ccdc66
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 66 isoform X2
translation: MKYKNRIIHPLKSKQILQVASPHENNSKNEKPLLKPIVTNTSVAPGKGESTELVTEKKADDKTKRNCETIPKNGQPGIKTSVKKLGITKQQPPKKQQITSDELRENLVCLTQEQLQQILASVGQANKSSNQKQERDKSTKPGKGAKETQATDEELKGDNPTSQNEVGCNNNKATRGNSSCRDSRASQTSGVVVAQANIIQTENTGNKAPLSSAIQTKDGLFGNLGERENSKEQLEAKRIQWKKELDEQVALKKQLQKNNEVSEFSEWNPWGKRDAGAPVRSNTKKILENIKGKSPVSSPAATGPHADGRVISTAPTVTNAPNTDVAPDGLIGKASSVSLSDLPAAIRSVFVLGDYAPRDHLLSAIKRDQQKKWLLELDKQREEDQNRRLKEKLEYSEGDNHSRWAMHFDSYQRKLPQPSPVSVNTGSILEKSAASGDGQANVLQLLPAQASPLPIQQSGSAGDGAALMNGDTPCDLSNAQKSSFLRSMTALLDPAEIEERDLRRQKQQEHQKAIAQQVEAKRRLKQLEEDNKRKEEQKEEQRLAKEREKLREQYDVETRTQRGKEELQTQNTNRLYEAMQKAQEEAKRQKQEQRIKDLVRKGHDISNLHKSVEGTTHEMGTCEIYNDLVYETVDEELGLDPLEEESPRKDRGIQTEDFEINGKAQRTMYNTQIRDRGQVSTTSNAAAEHNESNNMYAKKKSKPAEKAPPVTGKENYLQNDDLYNQFARMKKGKNEKRPEWNINITNKRYVPASQRYPRVMQVEREEKRMKRQMELLQLLEKNVPDQRPKKKPATKEQSSERLSSPVVPALQAKLQLATCPQLLDKQRLLAVRKEVPMKRNTSNHKLPVDKDYRCRSPPIPSLRNKQLQMVQEPRTVGNPAPSECCRWAPFANEAASDFVPYVRTDEVYHLDPDAPMSRPSTDDPQYKRSTVTVMDHLQCKADSADLPRDPLLNPDLLRNRERQQAILKSLSELRQGLMQKQRELETASPTH
SIO_010081: ccdc66
subclass of: SO_0000673
so part of: ccdc66
location: join(2438351..2438774,2439802..2439997,2443481..2443596,2444053..2444195,2445065..2445244,2445658..2445789,2446928..2447184,2451493..2451577,2452326..2452487,2456970..2457114,2457234..2457359,2459259..2459791,2461254..2461312,2463683..2463915,2467611..2467744,2469661..2469711)
location: region:2438351-2469711:1
so has part: feature:2438351-2438774:1:exon
so has part: feature:2439802-2439997:1:exon
so has part: feature:2443481-2443596:1:exon
so has part: feature:2444053-2444195:1:exon
so has part: feature:2445065-2445244:1:exon
so has part: feature:2445658-2445789:1:exon
so has part: feature:2446928-2447184:1:exon
so has part: feature:2451493-2451577:1:exon
so has part: feature:2452326-2452487:1:exon
so has part: feature:2456970-2457114:1:exon
so has part: feature:2457234-2457359:1:exon
so has part: feature:2459259-2459791:1:exon
so has part: feature:2461254-2461312:1:exon
so has part: feature:2463683-2463915:1:exon
so has part: feature:2467611-2467744:1:exon
so has part: feature:2469661-2469711:1:exon

XP_032892463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2438351-2438774:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2439802-2439997:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2443481-2443596:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2444053-2444195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2445065-2445244:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2445658-2445789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2446928-2447184:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2451493-2451577:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2452326-2452487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2456970-2457114:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2457234-2457359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2459259-2459791:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2461254-2461312:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2463683-2463915:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2467611-2467744:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2469661-2469711:1:exon

tasor
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tasor
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2474301..2511025)
location: region:2474301-2511025:-1
so has part: feature:2474301-2511025:-1:exon
subclass of: SO_0000010

116983040
type: Gene
SIO_000068: ncbigene

position:2474301:-1
position: 2474301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2511025:-1
position: 2511025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2474301-2511025:-1:exon

tasor
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tasor
product: transcription activation suppressor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033036573.1
SIO_010081: tasor
subclass of: SO_0000673
so part of: tasor
location: complement(join(2474301..2475884,2477856..2478011,2478091..2478269,2479167..2479275,2481655..2481814,2483087..2483212,2485051..2486102,2487653..2487797,2489416..2489954,2491940..2492677,2493677..2493748,2493874..2493943,2495034..2495137,2495760..2495863,2496418..2496523,2497341..2497360,2498152..2498279,2498458..2498592,2499199..2499290,2499486..2499558,2500677..2500769,2500856..2501004,2510555..2511025))
location: region:2474301-2511025:-1
so has part: feature:2510555-2511025:-1:exon
so has part: feature:2500856-2501004:-1:exon
so has part: feature:2500677-2500769:-1:exon
so has part: feature:2499486-2499558:-1:exon
so has part: feature:2499199-2499290:-1:exon
so has part: feature:2498458-2498592:-1:exon
so has part: feature:2498152-2498279:-1:exon
so has part: feature:2497341-2497360:-1:exon
so has part: feature:2496418-2496523:-1:exon
so has part: feature:2495760-2495863:-1:exon
so has part: feature:2495034-2495137:-1:exon
so has part: feature:2493874-2493943:-1:exon
so has part: feature:2493677-2493748:-1:exon
so has part: feature:2491940-2492677:-1:exon
so has part: feature:2489416-2489954:-1:exon
so has part: feature:2487653-2487797:-1:exon
so has part: feature:2485051-2486102:-1:exon
so has part: feature:2483087-2483212:-1:exon
so has part: feature:2481655-2481814:-1:exon
so has part: feature:2479167-2479275:-1:exon
so has part: feature:2478091-2478269:-1:exon
so has part: feature:2477856-2478011:-1:exon
so has part: feature:2474301-2475884:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2510555-2511025:-1:exon

position:2510555:-1
position: 2510555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2500856-2501004:-1:exon

position:2500856:-1
position: 2500856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2501004:-1
position: 2501004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2500677-2500769:-1:exon

position:2500677:-1
position: 2500677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2500769:-1
position: 2500769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2499486-2499558:-1:exon

position:2499486:-1
position: 2499486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2499558:-1
position: 2499558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2499199-2499290:-1:exon

position:2499199:-1
position: 2499199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2499290:-1
position: 2499290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2498458-2498592:-1:exon

position:2498458:-1
position: 2498458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2498592:-1
position: 2498592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2498152-2498279:-1:exon

position:2498152:-1
position: 2498152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2498279:-1
position: 2498279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2497341-2497360:-1:exon

position:2497341:-1
position: 2497341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2497360:-1
position: 2497360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2496418-2496523:-1:exon

position:2496418:-1
position: 2496418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2496523:-1
position: 2496523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2495760-2495863:-1:exon

position:2495760:-1
position: 2495760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2495863:-1
position: 2495863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2495034-2495137:-1:exon

position:2495034:-1
position: 2495034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2495137:-1
position: 2495137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2493874-2493943:-1:exon

position:2493874:-1
position: 2493874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2493943:-1
position: 2493943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2493677-2493748:-1:exon

position:2493677:-1
position: 2493677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2493748:-1
position: 2493748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2491940-2492677:-1:exon

position:2491940:-1
position: 2491940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2492677:-1
position: 2492677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2489416-2489954:-1:exon

position:2489416:-1
position: 2489416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2489954:-1
position: 2489954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2487653-2487797:-1:exon

position:2487653:-1
position: 2487653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2487797:-1
position: 2487797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2485051-2486102:-1:exon

position:2485051:-1
position: 2485051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2486102:-1
position: 2486102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2483087-2483212:-1:exon

position:2483087:-1
position: 2483087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2483212:-1
position: 2483212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2481655-2481814:-1:exon

position:2481655:-1
position: 2481655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2481814:-1
position: 2481814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2479167-2479275:-1:exon

position:2479167:-1
position: 2479167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2479275:-1
position: 2479275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2478091-2478269:-1:exon

position:2478091:-1
position: 2478091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2478269:-1
position: 2478269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2477856-2478011:-1:exon

position:2477856:-1
position: 2477856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2478011:-1
position: 2478011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2474301-2475884:-1:exon

position:2475884:-1
position: 2475884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tasor
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tasor
product: transcription activation suppressor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033036575.1
SIO_010081: tasor
subclass of: SO_0000673
so part of: tasor
location: complement(join(2474301..2475884,2477856..2478011,2478091..2478269,2479167..2479275,2481655..2481814,2483087..2483212,2485051..2486060,2487653..2487797,2489416..2489954,2491940..2492677,2493677..2493748,2493874..2493943,2495034..2495137,2495760..2495863,2496418..2496523,2497341..2497360,2498152..2498279,2498458..2498592,2499199..2499290,2499486..2499558,2500677..2500769,2500856..2501004,2510555..2511023))
location: region:2474301-2511023:-1
so has part: feature:2510555-2511023:-1:exon
so has part: feature:2500856-2501004:-1:exon
so has part: feature:2500677-2500769:-1:exon
so has part: feature:2499486-2499558:-1:exon
so has part: feature:2499199-2499290:-1:exon
so has part: feature:2498458-2498592:-1:exon
so has part: feature:2498152-2498279:-1:exon
so has part: feature:2497341-2497360:-1:exon
so has part: feature:2496418-2496523:-1:exon
so has part: feature:2495760-2495863:-1:exon
so has part: feature:2495034-2495137:-1:exon
so has part: feature:2493874-2493943:-1:exon
so has part: feature:2493677-2493748:-1:exon
so has part: feature:2491940-2492677:-1:exon
so has part: feature:2489416-2489954:-1:exon
so has part: feature:2487653-2487797:-1:exon
so has part: feature:2485051-2486060:-1:exon
so has part: feature:2483087-2483212:-1:exon
so has part: feature:2481655-2481814:-1:exon
so has part: feature:2479167-2479275:-1:exon
so has part: feature:2478091-2478269:-1:exon
so has part: feature:2477856-2478011:-1:exon
so has part: feature:2474301-2475884:-1:exon

position:2511023:-1
position: 2511023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2510555-2511023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2500856-2501004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2500677-2500769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2499486-2499558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2499199-2499290:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498458-2498592:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2498152-2498279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2497341-2497360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2496418-2496523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2495760-2495863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2495034-2495137:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2493874-2493943:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2493677-2493748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2491940-2492677:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2489416-2489954:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2487653-2487797:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2485051-2486060:-1:exon

position:2486060:-1
position: 2486060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2483087-2483212:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2481655-2481814:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2479167-2479275:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2478091-2478269:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2477856-2478011:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2474301-2475884:-1:exon

tasor
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tasor
product: transcription activation suppressor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033036574.1
SIO_010081: tasor
subclass of: SO_0000673
so part of: tasor
location: complement(join(2474301..2475884,2477856..2478011,2478091..2478269,2479167..2479275,2481655..2481814,2483087..2483212,2485051..2486102,2487653..2487789,2488762..2488763,2489416..2489954,2491940..2492677,2493677..2493748,2493874..2493943,2495034..2495137,2495760..2495863,2496418..2496523,2497341..2497360,2498152..2498279,2498458..2498592,2499199..2499290,2499486..2499558,2500677..2500769,2500856..2501004,2510555..2511017))
location: region:2474301-2511017:-1
so has part: feature:2510555-2511017:-1:exon
so has part: feature:2500856-2501004:-1:exon
so has part: feature:2500677-2500769:-1:exon
so has part: feature:2499486-2499558:-1:exon
so has part: feature:2499199-2499290:-1:exon
so has part: feature:2498458-2498592:-1:exon
so has part: feature:2498152-2498279:-1:exon
so has part: feature:2497341-2497360:-1:exon
so has part: feature:2496418-2496523:-1:exon
so has part: feature:2495760-2495863:-1:exon
so has part: feature:2495034-2495137:-1:exon
so has part: feature:2493874-2493943:-1:exon
so has part: feature:2493677-2493748:-1:exon
so has part: feature:2491940-2492677:-1:exon
so has part: feature:2489416-2489954:-1:exon
so has part: feature:2488762-2488763:-1:exon
so has part: feature:2487653-2487789:-1:exon
so has part: feature:2485051-2486102:-1:exon
so has part: feature:2483087-2483212:-1:exon
so has part: feature:2481655-2481814:-1:exon
so has part: feature:2479167-2479275:-1:exon
so has part: feature:2478091-2478269:-1:exon
so has part: feature:2477856-2478011:-1:exon
so has part: feature:2474301-2475884:-1:exon

position:2511017:-1
position: 2511017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2510555-2511017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2500856-2501004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2500677-2500769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2499486-2499558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2499199-2499290:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498458-2498592:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2498152-2498279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2497341-2497360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2496418-2496523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2495760-2495863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2495034-2495137:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2493874-2493943:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2493677-2493748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2491940-2492677:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2489416-2489954:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2488762-2488763:-1:exon

position:2488762:-1
position: 2488762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2488763:-1
position: 2488763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2487653-2487789:-1:exon

position:2487789:-1
position: 2487789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2485051-2486102:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2483087-2483212:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2481655-2481814:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2479167-2479275:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2478091-2478269:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2477856-2478011:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2474301-2475884:-1:exon

tasor
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tasor
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein TASOR isoform X3
translation: MASHDEPEKRRTPLTKEGDRERHPSHENGAGAAANAKAKSSLLFRNTWRSKQQNGEQASASVPGLLRADMAAAPNPSAAEGEERVHKTAEDLVRKNFQIPKKNKEKKELCQLVPVGPREFKQDILKILNTNCLEPSSSANFTYMKARLVHNERLEREYGEKRKEMRSEGRVEKELADSYAFLLLESSQVPTICEKGLSVGNSKVTILGNPAMGVYLSKYCDVLQPNPLINGKKAEIIIFKIIKGRVKAVFDNATKNLTPPTPKHDCHVFRNLNRVISLFTYRAFDLTQFYLYEFGNEGIRQCPRHVCPYAVVSFIYKENKLPKIAKPVTLGMEEIYSGKSYYTIWKGQLMIKGRFLCFGSLQSATQPFLPFKLPEKLDNDTVMSVDCLKTKIPAIIFQKKTFTGTREVLKKGLYYSLYELVEQSKTGRNLETLLHKLEEEKLVLIKPLDDRGFLFLFSPLEMADNESQNSKPKFLQALFLFPESRLNGTEDITRNTKCVPVAHNDPEAIPQLSTIIPALHFALEKIRKELPNSLKLVTIDAAFENNVTDYLKNSLQKEALAENVKLPQFTIPTYEEKRFAAVRQKRTNLPRILRSYFFYPYRYQFDVSKAAEVLDQVPSPDTEIHSPPVCAAGEQESNDPVPEITAQQPANPQVESIADDNNFPVPSDNMADHDPDKIQELIDLIYSRKRHGPGEASAVNLERLAQCISVKDDLGLKRKLEFVSEQSHKQMKITQGSLAEDGSILSDAVPQTMNGLSFCDPDLRQHDQASVLTADTQKLVGLLLEVLKSSTCPNSGTDLELNQEVRMSVCPNTSDLHQNSVDNSGNVDKSNASINEETKLKQQQSSDGHAPSNESTKEEQSHKETVFGRDKESPEFGDTGSDLPHNDGYHLKIKTYDQPFGEHSLQINLTAECPEEQSLGCISSPGRCSPCRESIHDQPHSKKMATSECTIDGDIDWKLIPITEDSCAVDPRVLNRKSNINHYQSPSDSDTGTGMECIGSALKEYSKDFHHSATYGINGHLFGLKGDSATAIENTVKLEYNKFSDKMKQLLKREKVQYGPDNKRLKFPAVQKVSMLSKYSNSQSHQIPVQSYINQLRKKMNSVISDACPDVSRTNLHPSSSPELAERTQKKVALSSEVAQLCTESRIIDFMCLTEEPNQYTKSVSEELTASEDIGEPEKSPENSALLACHTELQKKSGQASFSFGSLTDSNSAATTGEDKSLLRVPTLSFGKQLEATCSVQESSGIAALPEPQPCLTNLIQKLNPEVFCSLVEIIKDVQKNTVKFYIYEVEKTSICAEIKEYLTGLGNKESHPEEFLKRQDSSMDKLLIIIQNEDIASHIHKVPFLTSLKKLSRVSFAGVDTLDDVQNHTYNELFVSGGIVVSDETVLNPETIRFEKLQIFLDFLQDLSTPESKWIWKIHCKMHKKLKELARTNTAAFKILTLLNKYQKCNLVEVLSYHDCDSRSRNTIELDCLIKLQAQTMQHRHVVFLTETHMERLSSCLECGVVVACVNDFVKNFNSLIGYHSSNMGEKQQRLGSRDSLQGTFSSNSLELLEMENADAENLGTSEGNNEEEDMSLDSEENSPQIEICSEKSEALNVTNISQTEAQRTKGKVSPSDESLLQVSDDAAPKLTAASLQPFKVDSTDSKGAAFTYNSSFYTHPQIESNDRNFNVITHQSFLASGIEPSYIVSLNQKCQDADSYYSPGYDQNLAYNKNWGTSSDTSSVPSQRQQREKQHQYH
SIO_010081: tasor
subclass of: SO_0000673
so part of: tasor
location: complement(join(2475292..2475884,2477856..2478011,2478091..2478269,2479167..2479275,2481655..2481814,2483087..2483212,2485051..2486060,2487653..2487797,2489416..2489954,2491940..2492677,2493677..2493748,2493874..2493943,2495034..2495137,2495760..2495863,2496418..2496523,2497341..2497360,2498152..2498279,2498458..2498592,2499199..2499290,2499486..2499558,2500677..2500769,2500856..2501004,2510555..2510876))
location: region:2475292-2510876:-1
so has part: feature:2510555-2510876:-1:exon
so has part: feature:2500856-2501004:-1:exon
so has part: feature:2500677-2500769:-1:exon
so has part: feature:2499486-2499558:-1:exon
so has part: feature:2499199-2499290:-1:exon
so has part: feature:2498458-2498592:-1:exon
so has part: feature:2498152-2498279:-1:exon
so has part: feature:2497341-2497360:-1:exon
so has part: feature:2496418-2496523:-1:exon
so has part: feature:2495760-2495863:-1:exon
so has part: feature:2495034-2495137:-1:exon
so has part: feature:2493874-2493943:-1:exon
so has part: feature:2493677-2493748:-1:exon
so has part: feature:2491940-2492677:-1:exon
so has part: feature:2489416-2489954:-1:exon
so has part: feature:2487653-2487797:-1:exon
so has part: feature:2485051-2486060:-1:exon
so has part: feature:2483087-2483212:-1:exon
so has part: feature:2481655-2481814:-1:exon
so has part: feature:2479167-2479275:-1:exon
so has part: feature:2478091-2478269:-1:exon
so has part: feature:2477856-2478011:-1:exon
so has part: feature:2475292-2475884:-1:exon

XP_032892466.1
type: Protein
SIO_000068: ncbiprotein

position:2475292:-1
position: 2475292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2510876:-1
position: 2510876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2510555-2510876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2500856-2501004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2500677-2500769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2499486-2499558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2499199-2499290:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498458-2498592:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2498152-2498279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2497341-2497360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2496418-2496523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2495760-2495863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2495034-2495137:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2493874-2493943:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2493677-2493748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2491940-2492677:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2489416-2489954:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2487653-2487797:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2485051-2486060:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2483087-2483212:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2481655-2481814:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2479167-2479275:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2478091-2478269:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2477856-2478011:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2475292-2475884:-1:exon

tasor
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tasor
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein TASOR isoform X1
translation: MASHDEPEKRRTPLTKEGDRERHPSHENGAGAAANAKAKSSLLFRNTWRSKQQNGEQASASVPGLLRADMAAAPNPSAAEGEERVHKTAEDLVRKNFQIPKKNKEKKELCQLVPVGPREFKQDILKILNTNCLEPSSSANFTYMKARLVHNERLEREYGEKRKEMRSEGRVEKELADSYAFLLLESSQVPTICEKGLSVGNSKVTILGNPAMGVYLSKYCDVLQPNPLINGKKAEIIIFKIIKGRVKAVFDNATKNLTPPTPKHDCHVFRNLNRVISLFTYRAFDLTQFYLYEFGNEGIRQCPRHVCPYAVVSFIYKENKLPKIAKPVTLGMEEIYSGKSYYTIWKGQLMIKGRFLCFGSLQSATQPFLPFKLPEKLDNDTVMSVDCLKTKIPAIIFQKKTFTGTREVLKKGLYYSLYELVEQSKTGRNLETLLHKLEEEKLVLIKPLDDRGFLFLFSPLEMADNESQNSKPKFLQALFLFPESRLNGTEDITRNTKCVPVAHNDPEAIPQLSTIIPALHFALEKIRKELPNSLKLVTIDAAFENNVTDYLKNSLQKEALAENVKLPQFTIPTYEEKRFAAVRQKRTNLPRILRSYFFYPYRYQFDVSKAAEVLDQVPSPDTEIHSPPVCAAGEQESNDPVPEITAQQPANPQVESIADDNNFPVPSDNMADHDPDKIQELIDLIYSRKRHGPGEASAVNLERLAQCISVKDDLGLKRKLEFVSEQSHKQMKITQGSLAEDGSILSDAVPQTMNGLSFCDPDLRQHDQASVLTADTQKLVGLLLEVLKSSTCPNSGTDLELNQEVRMSVCPNTSDLHQNSVDNSGNVDKSNASINEETKLKQQQSSDGHAPSNESTKEEQSHKETVFGRDKESPEFGDTGSDLPHNDGYHLKIKTYDQPFGEHSLQINLTAECPEEQSLGCISSPGRCSPCRESIHDQPHSKKMATSECTIDGDIDWKLIPITDMKSRIEQLFYLPPEDSCAVDPRVLNRKSNINHYQSPSDSDTGTGMECIGSALKEYSKDFHHSATYGINGHLFGLKGDSATAIENTVKLEYNKFSDKMKQLLKREKVQYGPDNKRLKFPAVQKVSMLSKYSNSQSHQIPVQSYINQLRKKMNSVISDACPDVSRTNLHPSSSPELAERTQKKVALSSEVAQLCTESRIIDFMCLTEEPNQYTKSVSEELTASEDIGEPEKSPENSALLACHTELQKKSGQASFSFGSLTDSNSAATTGEDKSLLRVPTLSFGKQLEATCSVQESSGIAALPEPQPCLTNLIQKLNPEVFCSLVEIIKDVQKNTVKFYIYEVEKTSICAEIKEYLTGLGNKESHPEEFLKRQDSSMDKLLIIIQNEDIASHIHKVPFLTSLKKLSRVSFAGVDTLDDVQNHTYNELFVSGGIVVSDETVLNPETIRFEKLQIFLDFLQDLSTPESKWIWKIHCKMHKKLKELARTNTAAFKILTLLNKYQKCNLVEVLSYHDCDSRSRNTIELDCLIKLQAQTMQHRHVVFLTETHMERLSSCLECGVVVACVNDFVKNFNSLIGYHSSNMGEKQQRLGSRDSLQGTFSSNSLELLEMENADAENLGTSEGNNEEEDMSLDSEENSPQIEICSEKSEALNVTNISQTEAQRTKGKVSPSDESLLQVSDDAAPKLTAASLQPFKVDSTDSKGAAFTYNSSFYTHPQIESNDRNFNVITHQSFLASGIEPSYIVSLNQKCQDADSYYSPGYDQNLAYNKNWGTSSDTSSVPSQRQQREKQHQYH
SIO_010081: tasor
subclass of: SO_0000673
so part of: tasor
location: complement(join(2475292..2475884,2477856..2478011,2478091..2478269,2479167..2479275,2481655..2481814,2483087..2483212,2485051..2486102,2487653..2487797,2489416..2489954,2491940..2492677,2493677..2493748,2493874..2493943,2495034..2495137,2495760..2495863,2496418..2496523,2497341..2497360,2498152..2498279,2498458..2498592,2499199..2499290,2499486..2499558,2500677..2500769,2500856..2501004,2510555..2510876))
location: region:2475292-2510876:-1
so has part: feature:2510555-2510876:-1:exon
so has part: feature:2500856-2501004:-1:exon
so has part: feature:2500677-2500769:-1:exon
so has part: feature:2499486-2499558:-1:exon
so has part: feature:2499199-2499290:-1:exon
so has part: feature:2498458-2498592:-1:exon
so has part: feature:2498152-2498279:-1:exon
so has part: feature:2497341-2497360:-1:exon
so has part: feature:2496418-2496523:-1:exon
so has part: feature:2495760-2495863:-1:exon
so has part: feature:2495034-2495137:-1:exon
so has part: feature:2493874-2493943:-1:exon
so has part: feature:2493677-2493748:-1:exon
so has part: feature:2491940-2492677:-1:exon
so has part: feature:2489416-2489954:-1:exon
so has part: feature:2487653-2487797:-1:exon
so has part: feature:2485051-2486102:-1:exon
so has part: feature:2483087-2483212:-1:exon
so has part: feature:2481655-2481814:-1:exon
so has part: feature:2479167-2479275:-1:exon
so has part: feature:2478091-2478269:-1:exon
so has part: feature:2477856-2478011:-1:exon
so has part: feature:2475292-2475884:-1:exon

XP_032892464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2510555-2510876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2500856-2501004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2500677-2500769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2499486-2499558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2499199-2499290:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498458-2498592:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2498152-2498279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2497341-2497360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2496418-2496523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2495760-2495863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2495034-2495137:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2493874-2493943:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2493677-2493748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2491940-2492677:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2489416-2489954:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2487653-2487797:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2485051-2486102:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2483087-2483212:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2481655-2481814:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2479167-2479275:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2478091-2478269:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2477856-2478011:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2475292-2475884:-1:exon

tasor
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tasor
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein TASOR isoform X2
translation: MASHDEPEKRRTPLTKEGDRERHPSHENGAGAAANAKAKSSLLFRNTWRSKQQNGEQASASVPGLLRADMAAAPNPSAAEGEERVHKTAEDLVRKNFQIPKKNKEKKELCQLVPVGPREFKQDILKILNTNCLEPSSSANFTYMKARLVHNERLEREYGEKRKEMRSEGRVEKELADSYAFLLLESSQVPTICEKGLSVGNSKVTILGNPAMGVYLSKYCDVLQPNPLINGKKAEIIIFKIIKGRVKAVFDNATKNLTPPTPKHDCHVFRNLNRVISLFTYRAFDLTQFYLYEFGNEGIRQCPRHVCPYAVVSFIYKENKLPKIAKPVTLGMEEIYSGKSYYTIWKGQLMIKGRFLCFGSLQSATQPFLPFKLPEKLDNDTVMSVDCLKTKIPAIIFQKKTFTGTREVLKKGLYYSLYELVEQSKTGRNLETLLHKLEEEKLVLIKPLDDRGFLFLFSPLEMADNESQNSKPKFLQALFLFPESRLNGTEDITRNTKCVPVAHNDPEAIPQLSTIIPALHFALEKIRKELPNSLKLVTIDAAFENNVTDYLKNSLQKEALAENVKLPQFTIPTYEEKRFAAVRQKRTNLPRILRSYFFYPYRYQFDVSKAAEVLDQVPSPDTEIHSPPVCAAGEQESNDPVPEITAQQPANPQVESIADDNNFPVPSDNMADHDPDKIQELIDLIYSRKRHGPGEASAVNLERLAQCISVKDDLGLKRKLEFVSEQSHKQMKITQGSLAEDGSILSDAVPQTMNGLSFCDPDLRQHDQASVLTADTQKLVGLLLEVLKSSTCPNSGTDLELNQEVRMSVCPNTSDLHQNSVDNSGNVDKSNASINEETKLKQQQSSDGHAPSNESTKEEQSHKETVFGRDKESPEFGDTGSDLPHNDGYHLKIKTYDQPFGEHSLQINLTAECPEILGCISSPGRCSPCRESIHDQPHSKKMATSECTIDGDIDWKLIPITDMKSRIEQLFYLPPEDSCAVDPRVLNRKSNINHYQSPSDSDTGTGMECIGSALKEYSKDFHHSATYGINGHLFGLKGDSATAIENTVKLEYNKFSDKMKQLLKREKVQYGPDNKRLKFPAVQKVSMLSKYSNSQSHQIPVQSYINQLRKKMNSVISDACPDVSRTNLHPSSSPELAERTQKKVALSSEVAQLCTESRIIDFMCLTEEPNQYTKSVSEELTASEDIGEPEKSPENSALLACHTELQKKSGQASFSFGSLTDSNSAATTGEDKSLLRVPTLSFGKQLEATCSVQESSGIAALPEPQPCLTNLIQKLNPEVFCSLVEIIKDVQKNTVKFYIYEVEKTSICAEIKEYLTGLGNKESHPEEFLKRQDSSMDKLLIIIQNEDIASHIHKVPFLTSLKKLSRVSFAGVDTLDDVQNHTYNELFVSGGIVVSDETVLNPETIRFEKLQIFLDFLQDLSTPESKWIWKIHCKMHKKLKELARTNTAAFKILTLLNKYQKCNLVEVLSYHDCDSRSRNTIELDCLIKLQAQTMQHRHVVFLTETHMERLSSCLECGVVVACVNDFVKNFNSLIGYHSSNMGEKQQRLGSRDSLQGTFSSNSLELLEMENADAENLGTSEGNNEEEDMSLDSEENSPQIEICSEKSEALNVTNISQTEAQRTKGKVSPSDESLLQVSDDAAPKLTAASLQPFKVDSTDSKGAAFTYNSSFYTHPQIESNDRNFNVITHQSFLASGIEPSYIVSLNQKCQDADSYYSPGYDQNLAYNKNWGTSSDTSSVPSQRQQREKQHQYH
SIO_010081: tasor
subclass of: SO_0000673
so part of: tasor
location: complement(join(2475292..2475884,2477856..2478011,2478091..2478269,2479167..2479275,2481655..2481814,2483087..2483212,2485051..2486102,2487653..2487789,2488762..2488763,2489416..2489954,2491940..2492677,2493677..2493748,2493874..2493943,2495034..2495137,2495760..2495863,2496418..2496523,2497341..2497360,2498152..2498279,2498458..2498592,2499199..2499290,2499486..2499558,2500677..2500769,2500856..2501004,2510555..2510876))
location: region:2475292-2510876:-1
so has part: feature:2510555-2510876:-1:exon
so has part: feature:2500856-2501004:-1:exon
so has part: feature:2500677-2500769:-1:exon
so has part: feature:2499486-2499558:-1:exon
so has part: feature:2499199-2499290:-1:exon
so has part: feature:2498458-2498592:-1:exon
so has part: feature:2498152-2498279:-1:exon
so has part: feature:2497341-2497360:-1:exon
so has part: feature:2496418-2496523:-1:exon
so has part: feature:2495760-2495863:-1:exon
so has part: feature:2495034-2495137:-1:exon
so has part: feature:2493874-2493943:-1:exon
so has part: feature:2493677-2493748:-1:exon
so has part: feature:2491940-2492677:-1:exon
so has part: feature:2489416-2489954:-1:exon
so has part: feature:2488762-2488763:-1:exon
so has part: feature:2487653-2487789:-1:exon
so has part: feature:2485051-2486102:-1:exon
so has part: feature:2483087-2483212:-1:exon
so has part: feature:2481655-2481814:-1:exon
so has part: feature:2479167-2479275:-1:exon
so has part: feature:2478091-2478269:-1:exon
so has part: feature:2477856-2478011:-1:exon
so has part: feature:2475292-2475884:-1:exon

XP_032892465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2510555-2510876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2500856-2501004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2500677-2500769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2499486-2499558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2499199-2499290:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498458-2498592:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2498152-2498279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2497341-2497360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2496418-2496523:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2495760-2495863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2495034-2495137:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2493874-2493943:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2493677-2493748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2491940-2492677:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2489416-2489954:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2488762-2488763:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2487653-2487789:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2485051-2486102:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2483087-2483212:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2481655-2481814:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2479167-2479275:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2478091-2478269:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2477856-2478011:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2475292-2475884:-1:exon

arhgef3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: arhgef3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2531438..2665461)
location: region:2531438-2665461:-1
so has part: feature:2531438-2665461:-1:exon
subclass of: SO_0000010

116983041
type: Gene
SIO_000068: ncbigene

position:2531438:-1
position: 2531438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2665461:-1
position: 2665461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2531438-2665461:-1:exon

arhgef3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: arhgef3
product: Rho guanine nucleotide exchange factor 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033036579.1
SIO_010081: arhgef3
subclass of: SO_0000673
so part of: arhgef3
location: complement(join(2531438..2532837,2535108..2535294,2537288..2537458,2540478..2540735,2545902..2545978,2546146..2546242,2547452..2547514,2549351..2549521,2553801..2553908,2616430..2616489,2638925..2638991,2665296..2665461))
location: region:2531438-2665461:-1
so has part: feature:2665296-2665461:-1:exon
so has part: feature:2638925-2638991:-1:exon
so has part: feature:2616430-2616489:-1:exon
so has part: feature:2553801-2553908:-1:exon
so has part: feature:2549351-2549521:-1:exon
so has part: feature:2547452-2547514:-1:exon
so has part: feature:2546146-2546242:-1:exon
so has part: feature:2545902-2545978:-1:exon
so has part: feature:2540478-2540735:-1:exon
so has part: feature:2537288-2537458:-1:exon
so has part: feature:2535108-2535294:-1:exon
so has part: feature:2531438-2532837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2665296-2665461:-1:exon

position:2665296:-1
position: 2665296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2638925-2638991:-1:exon

position:2638925:-1
position: 2638925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2638991:-1
position: 2638991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2616430-2616489:-1:exon

position:2616430:-1
position: 2616430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2616489:-1
position: 2616489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2553801-2553908:-1:exon

position:2553801:-1
position: 2553801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2553908:-1
position: 2553908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2549351-2549521:-1:exon

position:2549351:-1
position: 2549351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2549521:-1
position: 2549521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2547452-2547514:-1:exon

position:2547452:-1
position: 2547452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2547514:-1
position: 2547514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2546146-2546242:-1:exon

position:2546146:-1
position: 2546146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2546242:-1
position: 2546242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2545902-2545978:-1:exon

position:2545902:-1
position: 2545902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2545978:-1
position: 2545978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2540478-2540735:-1:exon

position:2540478:-1
position: 2540478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2540735:-1
position: 2540735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2537288-2537458:-1:exon

position:2537288:-1
position: 2537288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2537458:-1
position: 2537458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2535108-2535294:-1:exon

position:2535108:-1
position: 2535108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2535294:-1
position: 2535294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2531438-2532837:-1:exon

position:2532837:-1
position: 2532837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

arhgef3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: arhgef3
product: Rho guanine nucleotide exchange factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033036578.1
SIO_010081: arhgef3
subclass of: SO_0000673
so part of: arhgef3
location: complement(join(2531438..2532837,2535108..2535294,2537288..2537458,2540478..2540735,2545902..2545978,2546146..2546242,2547452..2547514,2549351..2549521,2553801..2553908,2616430..2616492,2638925..2638991,2665296..2665461))
location: region:2531438-2665461:-1
so has part: feature:2665296-2665461:-1:exon
so has part: feature:2638925-2638991:-1:exon
so has part: feature:2616430-2616492:-1:exon
so has part: feature:2553801-2553908:-1:exon
so has part: feature:2549351-2549521:-1:exon
so has part: feature:2547452-2547514:-1:exon
so has part: feature:2546146-2546242:-1:exon
so has part: feature:2545902-2545978:-1:exon
so has part: feature:2540478-2540735:-1:exon
so has part: feature:2537288-2537458:-1:exon
so has part: feature:2535108-2535294:-1:exon
so has part: feature:2531438-2532837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2665296-2665461:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2638925-2638991:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2616430-2616492:-1:exon

position:2616492:-1
position: 2616492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2553801-2553908:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2549351-2549521:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2547452-2547514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2546146-2546242:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2545902-2545978:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2540478-2540735:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2537288-2537458:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2535108-2535294:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2531438-2532837:-1:exon

arhgef3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: arhgef3
product: Rho guanine nucleotide exchange factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033036576.1
SIO_010081: arhgef3
subclass of: SO_0000673
so part of: arhgef3
location: complement(join(2531438..2532837,2535108..2535294,2537288..2537458,2540478..2540735,2545902..2545978,2546146..2546242,2547452..2547514,2549351..2549521,2553801..2553908,2616430..2616492,2621785..2621904))
location: region:2531438-2621904:-1
so has part: feature:2621785-2621904:-1:exon
so has part: feature:2616430-2616492:-1:exon
so has part: feature:2553801-2553908:-1:exon
so has part: feature:2549351-2549521:-1:exon
so has part: feature:2547452-2547514:-1:exon
so has part: feature:2546146-2546242:-1:exon
so has part: feature:2545902-2545978:-1:exon
so has part: feature:2540478-2540735:-1:exon
so has part: feature:2537288-2537458:-1:exon
so has part: feature:2535108-2535294:-1:exon
so has part: feature:2531438-2532837:-1:exon

position:2621904:-1
position: 2621904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2621785-2621904:-1:exon

position:2621785:-1
position: 2621785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2616430-2616492:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2553801-2553908:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2549351-2549521:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2547452-2547514:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2546146-2546242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2545902-2545978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2540478-2540735:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2537288-2537458:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2535108-2535294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2531438-2532837:-1:exon

arhgef3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: arhgef3
product: Rho guanine nucleotide exchange factor 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033036581.1
SIO_010081: arhgef3
subclass of: SO_0000673
so part of: arhgef3
location: complement(join(2531438..2532837,2535108..2535294,2537288..2537458,2540478..2540735,2545902..2545978,2546146..2546242,2547452..2547514,2549351..2549521,2553801..2553908,2568385..2568527,2572979..2572983))
location: region:2531438-2572983:-1
so has part: feature:2572979-2572983:-1:exon
so has part: feature:2568385-2568527:-1:exon
so has part: feature:2553801-2553908:-1:exon
so has part: feature:2549351-2549521:-1:exon
so has part: feature:2547452-2547514:-1:exon
so has part: feature:2546146-2546242:-1:exon
so has part: feature:2545902-2545978:-1:exon
so has part: feature:2540478-2540735:-1:exon
so has part: feature:2537288-2537458:-1:exon
so has part: feature:2535108-2535294:-1:exon
so has part: feature:2531438-2532837:-1:exon

position:2572983:-1
position: 2572983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2572979-2572983:-1:exon

position:2572979:-1
position: 2572979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2568385-2568527:-1:exon

position:2568385:-1
position: 2568385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2568527:-1
position: 2568527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2553801-2553908:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2549351-2549521:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2547452-2547514:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2546146-2546242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2545902-2545978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2540478-2540735:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2537288-2537458:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2535108-2535294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2531438-2532837:-1:exon

arhgef3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: arhgef3
product: Rho guanine nucleotide exchange factor 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033036580.1
SIO_010081: arhgef3
subclass of: SO_0000673
so part of: arhgef3
location: complement(join(2531438..2532837,2535108..2535294,2537288..2537458,2540478..2540735,2545902..2545978,2546146..2546242,2547452..2547514,2549351..2549521,2553801..2553908,2568385..2568619))
location: region:2531438-2568619:-1
so has part: feature:2568385-2568619:-1:exon
so has part: feature:2553801-2553908:-1:exon
so has part: feature:2549351-2549521:-1:exon
so has part: feature:2547452-2547514:-1:exon
so has part: feature:2546146-2546242:-1:exon
so has part: feature:2545902-2545978:-1:exon
so has part: feature:2540478-2540735:-1:exon
so has part: feature:2537288-2537458:-1:exon
so has part: feature:2535108-2535294:-1:exon
so has part: feature:2531438-2532837:-1:exon

position:2568619:-1
position: 2568619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2568385-2568619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2553801-2553908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2549351-2549521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2547452-2547514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2546146-2546242:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2545902-2545978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2540478-2540735:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2537288-2537458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2535108-2535294:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2531438-2532837:-1:exon

arhgef3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: arhgef3
product: Rho guanine nucleotide exchange factor 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033036582.1
SIO_010081: arhgef3
subclass of: SO_0000673
so part of: arhgef3
location: complement(join(2531438..2532837,2535108..2535294,2537288..2537458,2540478..2540735,2545902..2545978,2546146..2546242,2547452..2547514,2549351..2549521,2553801..2553908,2554804..2555123))
location: region:2531438-2555123:-1
so has part: feature:2554804-2555123:-1:exon
so has part: feature:2553801-2553908:-1:exon
so has part: feature:2549351-2549521:-1:exon
so has part: feature:2547452-2547514:-1:exon
so has part: feature:2546146-2546242:-1:exon
so has part: feature:2545902-2545978:-1:exon
so has part: feature:2540478-2540735:-1:exon
so has part: feature:2537288-2537458:-1:exon
so has part: feature:2535108-2535294:-1:exon
so has part: feature:2531438-2532837:-1:exon

position:2555123:-1
position: 2555123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2554804-2555123:-1:exon

position:2554804:-1
position: 2554804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2553801-2553908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2549351-2549521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2547452-2547514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2546146-2546242:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2545902-2545978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2540478-2540735:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2537288-2537458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2535108-2535294:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2531438-2532837:-1:exon

arhgef3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: arhgef3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 3 isoform X3
translation: MQPGDPQHVPDRPTSQEGSNSSLLSVVSGWTLRGKRKQRKKDEDSLSLCSLDGNEPSNKRAKPLSRVTSLASLIPPLKATPLKRFSQTLQRSISFRNESRTDIFTPRSFSRQGAPVITKRRDSKLWSETFDIRVNQMLTAKEIKRQEAIFELSQGEQVLIEDLKLAKKAYRDPMLKLSIMTEQELKQIFGTLDSLIPLHEDLLSRLREARKPDGTTERVGHILVGWLPCLNSYDSYCSNQVAAKALLDHKKLDHRVHDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLKEILRHTPNDHPDKQHLEEAINIVQGIVAEINKKTGESECQFYKERLVFLLESQKDPLIENSKMLCCHGDLKNNRGAKLHVFLFQEVLVITRVVTCSEQLCYQLYRQPIPVSDLVLNDLQDGEVRLGGSIRGAFSNNERTKNFFRVSFVDPSEGQSHSLQANDAFNKQQWLNCIRQAKEAVQRSLSDAGTLGYKRHTHLTPNGIIVSHQEPKLERMDQSDNESDCSMDTSEISGDYEQMEQTHCCVYQKRIETDV
SIO_010081: arhgef3
subclass of: SO_0000673
so part of: arhgef3
location: complement(join(2532488..2532837,2535108..2535294,2537288..2537458,2540478..2540735,2545902..2545978,2546146..2546242,2547452..2547514,2549351..2549521,2553801..2553908,2616430..2616489,2638925..2638991,2665296..2665330))
location: region:2532488-2665330:-1
so has part: feature:2665296-2665330:-1:exon
so has part: feature:2638925-2638991:-1:exon
so has part: feature:2616430-2616489:-1:exon
so has part: feature:2553801-2553908:-1:exon
so has part: feature:2549351-2549521:-1:exon
so has part: feature:2547452-2547514:-1:exon
so has part: feature:2546146-2546242:-1:exon
so has part: feature:2545902-2545978:-1:exon
so has part: feature:2540478-2540735:-1:exon
so has part: feature:2537288-2537458:-1:exon
so has part: feature:2535108-2535294:-1:exon
so has part: feature:2532488-2532837:-1:exon

XP_032892470.1
type: Protein
SIO_000068: ncbiprotein

position:2532488:-1
position: 2532488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2665330:-1
position: 2665330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665296-2665330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2638925-2638991:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2616430-2616489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2553801-2553908:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2549351-2549521:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2547452-2547514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2546146-2546242:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2545902-2545978:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2540478-2540735:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2537288-2537458:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2535108-2535294:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2532488-2532837:-1:exon

arhgef3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: arhgef3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 3 isoform X2
translation: MQPGDPQHVPDRPTSQEGSNSSLLSVVSGWTLRGKKRKQRKKDEDSLSLCSLDGNEPSNKRAKPLSRVTSLASLIPPLKATPLKRFSQTLQRSISFRNESRTDIFTPRSFSRQGAPVITKRRDSKLWSETFDIRVNQMLTAKEIKRQEAIFELSQGEQVLIEDLKLAKKAYRDPMLKLSIMTEQELKQIFGTLDSLIPLHEDLLSRLREARKPDGTTERVGHILVGWLPCLNSYDSYCSNQVAAKALLDHKKLDHRVHDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLKEILRHTPNDHPDKQHLEEAINIVQGIVAEINKKTGESECQFYKERLVFLLESQKDPLIENSKMLCCHGDLKNNRGAKLHVFLFQEVLVITRVVTCSEQLCYQLYRQPIPVSDLVLNDLQDGEVRLGGSIRGAFSNNERTKNFFRVSFVDPSEGQSHSLQANDAFNKQQWLNCIRQAKEAVQRSLSDAGTLGYKRHTHLTPNGIIVSHQEPKLERMDQSDNESDCSMDTSEISGDYEQMEQTHCCVYQKRIETDV
SIO_010081: arhgef3
subclass of: SO_0000673
so part of: arhgef3
location: complement(join(2532488..2532837,2535108..2535294,2537288..2537458,2540478..2540735,2545902..2545978,2546146..2546242,2547452..2547514,2549351..2549521,2553801..2553908,2616430..2616492,2638925..2638991,2665296..2665330))
location: region:2532488-2665330:-1
so has part: feature:2665296-2665330:-1:exon
so has part: feature:2638925-2638991:-1:exon
so has part: feature:2616430-2616492:-1:exon
so has part: feature:2553801-2553908:-1:exon
so has part: feature:2549351-2549521:-1:exon
so has part: feature:2547452-2547514:-1:exon
so has part: feature:2546146-2546242:-1:exon
so has part: feature:2545902-2545978:-1:exon
so has part: feature:2540478-2540735:-1:exon
so has part: feature:2537288-2537458:-1:exon
so has part: feature:2535108-2535294:-1:exon
so has part: feature:2532488-2532837:-1:exon

XP_032892469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2665296-2665330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2638925-2638991:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2616430-2616492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2553801-2553908:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2549351-2549521:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2547452-2547514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2546146-2546242:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2545902-2545978:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2540478-2540735:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2537288-2537458:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2535108-2535294:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2532488-2532837:-1:exon

arhgef3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: arhgef3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 3 isoform X1
translation: MLQTQPHILSSRLLLLLLKTPTTSLMVWCCLFMYQKKRKQRKKDEDSLSLCSLDGNEPSNKRAKPLSRVTSLASLIPPLKATPLKRFSQTLQRSISFRNESRTDIFTPRSFSRQGAPVITKRRDSKLWSETFDIRVNQMLTAKEIKRQEAIFELSQGEQVLIEDLKLAKKAYRDPMLKLSIMTEQELKQIFGTLDSLIPLHEDLLSRLREARKPDGTTERVGHILVGWLPCLNSYDSYCSNQVAAKALLDHKKLDHRVHDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLKEILRHTPNDHPDKQHLEEAINIVQGIVAEINKKTGESECQFYKERLVFLLESQKDPLIENSKMLCCHGDLKNNRGAKLHVFLFQEVLVITRVVTCSEQLCYQLYRQPIPVSDLVLNDLQDGEVRLGGSIRGAFSNNERTKNFFRVSFVDPSEGQSHSLQANDAFNKQQWLNCIRQAKEAVQRSLSDAGTLGYKRHTHLTPNGIIVSHQEPKLERMDQSDNESDCSMDTSEISGDYEQMEQTHCCVYQKRIETDV
SIO_010081: arhgef3
subclass of: SO_0000673
so part of: arhgef3
location: complement(join(2532488..2532837,2535108..2535294,2537288..2537458,2540478..2540735,2545902..2545978,2546146..2546242,2547452..2547514,2549351..2549521,2553801..2553908,2616430..2616492,2621785..2621889))
location: region:2532488-2621889:-1
so has part: feature:2621785-2621889:-1:exon
so has part: feature:2616430-2616492:-1:exon
so has part: feature:2553801-2553908:-1:exon
so has part: feature:2549351-2549521:-1:exon
so has part: feature:2547452-2547514:-1:exon
so has part: feature:2546146-2546242:-1:exon
so has part: feature:2545902-2545978:-1:exon
so has part: feature:2540478-2540735:-1:exon
so has part: feature:2537288-2537458:-1:exon
so has part: feature:2535108-2535294:-1:exon
so has part: feature:2532488-2532837:-1:exon

XP_032892467.1
type: Protein
SIO_000068: ncbiprotein

position:2621889:-1
position: 2621889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2621785-2621889:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2616430-2616492:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2553801-2553908:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2549351-2549521:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2547452-2547514:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2546146-2546242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2545902-2545978:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2540478-2540735:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2537288-2537458:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2535108-2535294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2532488-2532837:-1:exon

arhgef3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: arhgef3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 3 isoform X4
translation: MVAKDYPYYIAAKRTNCALEARTISSSLKETEEPSNKRAKPLSRVTSLASLIPPLKATPLKRFSQTLQRSISFRNESRTDIFTPRSFSRQGAPVITKRRDSKLWSETFDIRVNQMLTAKEIKRQEAIFELSQGEQVLIEDLKLAKKAYRDPMLKLSIMTEQELKQIFGTLDSLIPLHEDLLSRLREARKPDGTTERVGHILVGWLPCLNSYDSYCSNQVAAKALLDHKKLDHRVHDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLKEILRHTPNDHPDKQHLEEAINIVQGIVAEINKKTGESECQFYKERLVFLLESQKDPLIENSKMLCCHGDLKNNRGAKLHVFLFQEVLVITRVVTCSEQLCYQLYRQPIPVSDLVLNDLQDGEVRLGGSIRGAFSNNERTKNFFRVSFVDPSEGQSHSLQANDAFNKQQWLNCIRQAKEAVQRSLSDAGTLGYKRHTHLTPNGIIVSHQEPKLERMDQSDNESDCSMDTSEISGDYEQMEQTHCCVYQKRIETDV
SIO_010081: arhgef3
subclass of: SO_0000673
so part of: arhgef3
location: complement(join(2532488..2532837,2535108..2535294,2537288..2537458,2540478..2540735,2545902..2545978,2546146..2546242,2547452..2547514,2549351..2549521,2553801..2553908,2568385..2568480))
location: region:2532488-2568480:-1
so has part: feature:2568385-2568480:-1:exon
so has part: feature:2553801-2553908:-1:exon
so has part: feature:2549351-2549521:-1:exon
so has part: feature:2547452-2547514:-1:exon
so has part: feature:2546146-2546242:-1:exon
so has part: feature:2545902-2545978:-1:exon
so has part: feature:2540478-2540735:-1:exon
so has part: feature:2537288-2537458:-1:exon
so has part: feature:2535108-2535294:-1:exon
so has part: feature:2532488-2532837:-1:exon

XP_032892471.1
type: Protein
SIO_000068: ncbiprotein

position:2568480:-1
position: 2568480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2568385-2568480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2553801-2553908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2549351-2549521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2547452-2547514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2546146-2546242:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2545902-2545978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2540478-2540735:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2537288-2537458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2535108-2535294:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2532488-2532837:-1:exon

arhgef3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: arhgef3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 3 isoform X4
translation: MVAKDYPYYIAAKRTNCALEARTISSSLKETEEPSNKRAKPLSRVTSLASLIPPLKATPLKRFSQTLQRSISFRNESRTDIFTPRSFSRQGAPVITKRRDSKLWSETFDIRVNQMLTAKEIKRQEAIFELSQGEQVLIEDLKLAKKAYRDPMLKLSIMTEQELKQIFGTLDSLIPLHEDLLSRLREARKPDGTTERVGHILVGWLPCLNSYDSYCSNQVAAKALLDHKKLDHRVHDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLKEILRHTPNDHPDKQHLEEAINIVQGIVAEINKKTGESECQFYKERLVFLLESQKDPLIENSKMLCCHGDLKNNRGAKLHVFLFQEVLVITRVVTCSEQLCYQLYRQPIPVSDLVLNDLQDGEVRLGGSIRGAFSNNERTKNFFRVSFVDPSEGQSHSLQANDAFNKQQWLNCIRQAKEAVQRSLSDAGTLGYKRHTHLTPNGIIVSHQEPKLERMDQSDNESDCSMDTSEISGDYEQMEQTHCCVYQKRIETDV
SIO_010081: arhgef3
subclass of: SO_0000673
so part of: arhgef3
location: complement(join(2532488..2532837,2535108..2535294,2537288..2537458,2540478..2540735,2545902..2545978,2546146..2546242,2547452..2547514,2549351..2549521,2553801..2553908,2568385..2568480))
location: region:2532488-2568480:-1
so has part: feature:2568385-2568480:-1:exon
so has part: feature:2553801-2553908:-1:exon
so has part: feature:2549351-2549521:-1:exon
so has part: feature:2547452-2547514:-1:exon
so has part: feature:2546146-2546242:-1:exon
so has part: feature:2545902-2545978:-1:exon
so has part: feature:2540478-2540735:-1:exon
so has part: feature:2537288-2537458:-1:exon
so has part: feature:2535108-2535294:-1:exon
so has part: feature:2532488-2532837:-1:exon

XP_032892472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2568385-2568480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2553801-2553908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2549351-2549521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2547452-2547514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2546146-2546242:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2545902-2545978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2540478-2540735:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2537288-2537458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2535108-2535294:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2532488-2532837:-1:exon

arhgef3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: arhgef3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 3 isoform X5
translation: MEIKKYKEPSNKRAKPLSRVTSLASLIPPLKATPLKRFSQTLQRSISFRNESRTDIFTPRSFSRQGAPVITKRRDSKLWSETFDIRVNQMLTAKEIKRQEAIFELSQGEQVLIEDLKLAKKAYRDPMLKLSIMTEQELKQIFGTLDSLIPLHEDLLSRLREARKPDGTTERVGHILVGWLPCLNSYDSYCSNQVAAKALLDHKKLDHRVHDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLKEILRHTPNDHPDKQHLEEAINIVQGIVAEINKKTGESECQFYKERLVFLLESQKDPLIENSKMLCCHGDLKNNRGAKLHVFLFQEVLVITRVVTCSEQLCYQLYRQPIPVSDLVLNDLQDGEVRLGGSIRGAFSNNERTKNFFRVSFVDPSEGQSHSLQANDAFNKQQWLNCIRQAKEAVQRSLSDAGTLGYKRHTHLTPNGIIVSHQEPKLERMDQSDNESDCSMDTSEISGDYEQMEQTHCCVYQKRIETDV
SIO_010081: arhgef3
subclass of: SO_0000673
so part of: arhgef3
location: complement(join(2532488..2532837,2535108..2535294,2537288..2537458,2540478..2540735,2545902..2545978,2546146..2546242,2547452..2547514,2549351..2549521,2553801..2553908,2554804..2554824))
location: region:2532488-2554824:-1
so has part: feature:2554804-2554824:-1:exon
so has part: feature:2553801-2553908:-1:exon
so has part: feature:2549351-2549521:-1:exon
so has part: feature:2547452-2547514:-1:exon
so has part: feature:2546146-2546242:-1:exon
so has part: feature:2545902-2545978:-1:exon
so has part: feature:2540478-2540735:-1:exon
so has part: feature:2537288-2537458:-1:exon
so has part: feature:2535108-2535294:-1:exon
so has part: feature:2532488-2532837:-1:exon

XP_032892473.1
type: Protein
SIO_000068: ncbiprotein

position:2554824:-1
position: 2554824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2554804-2554824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2553801-2553908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2549351-2549521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2547452-2547514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2546146-2546242:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2545902-2545978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2540478-2540735:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2537288-2537458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2535108-2535294:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2532488-2532837:-1:exon

il17rd
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: il17rd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2675774..2730489)
location: region:2675774-2730489:-1
so has part: feature:2675774-2730489:-1:exon
subclass of: SO_0000010

116983042
type: Gene
SIO_000068: ncbigene

position:2675774:-1
position: 2675774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2730489:-1
position: 2730489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2675774-2730489:-1:exon

il17rd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: il17rd
product: interleukin 17 receptor D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033036583.1
SIO_010081: il17rd
subclass of: SO_0000673
so part of: il17rd
location: complement(join(2675774..2676137,2679701..2680643,2683454..2683614,2686657..2686767,2688310..2688364,2691660..2691814,2697574..2697688,2699912..2700036,2710902..2711027,2715191..2715227,2730265..2730489))
location: region:2675774-2730489:-1
so has part: feature:2730265-2730489:-1:exon
so has part: feature:2715191-2715227:-1:exon
so has part: feature:2710902-2711027:-1:exon
so has part: feature:2699912-2700036:-1:exon
so has part: feature:2697574-2697688:-1:exon
so has part: feature:2691660-2691814:-1:exon
so has part: feature:2688310-2688364:-1:exon
so has part: feature:2686657-2686767:-1:exon
so has part: feature:2683454-2683614:-1:exon
so has part: feature:2679701-2680643:-1:exon
so has part: feature:2675774-2676137:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2730265-2730489:-1:exon

position:2730265:-1
position: 2730265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2715191-2715227:-1:exon

position:2715191:-1
position: 2715191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2715227:-1
position: 2715227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2710902-2711027:-1:exon

position:2710902:-1
position: 2710902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2711027:-1
position: 2711027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2699912-2700036:-1:exon

position:2699912:-1
position: 2699912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2700036:-1
position: 2700036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2697574-2697688:-1:exon

position:2697574:-1
position: 2697574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2697688:-1
position: 2697688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2691660-2691814:-1:exon

position:2691660:-1
position: 2691660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2691814:-1
position: 2691814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2688310-2688364:-1:exon

position:2688310:-1
position: 2688310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2688364:-1
position: 2688364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2686657-2686767:-1:exon

position:2686657:-1
position: 2686657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2686767:-1
position: 2686767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2683454-2683614:-1:exon

position:2683454:-1
position: 2683454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2683614:-1
position: 2683614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2679701-2680643:-1:exon

position:2679701:-1
position: 2679701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2680643:-1
position: 2680643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2675774-2676137:-1:exon

position:2676137:-1
position: 2676137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

il17rd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: il17rd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-17 receptor D
translation: MAAAAATACVLLLLLTVAAGWERRAVGAGATAGQRGSLLCPSKDNGRTVSGFRYEDCSSLGEVKGQHAIDRVGGFCFSQFLQGDRVDVRFQWTPGPLGIEYIRGFKIILHEAKSIGAEKTCQALVLEEKNQLKYFNKTLVLKSHPFRSLKFKTQYNVTILPFPNLLGENNTFQFEVECWSPKNLDTNQPYLSPHGNVTFDLAPSIFGFKAYHIRCKMNSGFQKEKNIFVVTDSSNATGKQVNFTIRPVLFPWAGPLRAMAITVPLVVVSAIITLFTIVCCKKQQNPVYSELDEENSESSPSPRTRAKVFICYSSKDCQKHLAVVQCFAAFLQDFCGCEVALDLWEQLEICKEGQTAWLSRQIMESHYIIVICSKGMKFFVEKKQHKHRGRCREGELFLLAVSMVAERLRQARLQAGNPSRFIAVYFDYSCEGDIPGALDLACKYKLMDHFPQLHCHLHARDVSQPDADADTDTQQANVRKSNYFHTRSGRSLYMAISNMKQLIELEPNWFEKQLLMPGLLPLPLPPRQARPRTDSGLVLNEVVFKQQLTHQDFHLKTRADITPTNSVSYSIIQHLDVREDGDDSDPREARALLRPAPHTLAVVTLPEMPRDSGIYDSSIPSSELSLPLMEGLSSDQADTGSMADSVSTSSGLGEDDPPALPTKAAVPGLCKLEVDSHVHGAVTL
SIO_010081: il17rd
subclass of: SO_0000673
so part of: il17rd
location: complement(join(2676040..2676137,2679701..2680643,2683454..2683614,2686657..2686767,2688310..2688364,2691660..2691814,2697574..2697688,2699912..2700036,2710902..2711027,2715191..2715227,2730265..2730393))
location: region:2676040-2730393:-1
so has part: feature:2730265-2730393:-1:exon
so has part: feature:2715191-2715227:-1:exon
so has part: feature:2710902-2711027:-1:exon
so has part: feature:2699912-2700036:-1:exon
so has part: feature:2697574-2697688:-1:exon
so has part: feature:2691660-2691814:-1:exon
so has part: feature:2688310-2688364:-1:exon
so has part: feature:2686657-2686767:-1:exon
so has part: feature:2683454-2683614:-1:exon
so has part: feature:2679701-2680643:-1:exon
so has part: feature:2676040-2676137:-1:exon

XP_032892474.1
type: Protein
SIO_000068: ncbiprotein

position:2676040:-1
position: 2676040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2730393:-1
position: 2730393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2730265-2730393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2715191-2715227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2710902-2711027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2699912-2700036:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2697574-2697688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2691660-2691814:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2688310-2688364:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2686657-2686767:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2683454-2683614:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2679701-2680643:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2676040-2676137:-1:exon

hesx1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: hesx1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2752316..2756881)
location: region:2752316-2756881:-1
so has part: feature:2752316-2756881:-1:exon
subclass of: SO_0000010

116983556
type: Gene
SIO_000068: ncbigene

position:2752316:-1
position: 2752316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2756881:-1
position: 2756881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2752316-2756881:-1:exon

hesx1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: hesx1
product: HESX homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033037343.1
SIO_010081: hesx1
subclass of: SO_0000673
so part of: hesx1
location: complement(join(2752316..2752538,2752871..2752972,2755326..2755507,2756683..2756881))
location: region:2752316-2756881:-1
so has part: feature:2756683-2756881:-1:exon
so has part: feature:2755326-2755507:-1:exon
so has part: feature:2752871-2752972:-1:exon
so has part: feature:2752316-2752538:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2756683-2756881:-1:exon

position:2756683:-1
position: 2756683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2755326-2755507:-1:exon

position:2755326:-1
position: 2755326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2755507:-1
position: 2755507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2752871-2752972:-1:exon

position:2752871:-1
position: 2752871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2752972:-1
position: 2752972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2752316-2752538:-1:exon

position:2752538:-1
position: 2752538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hesx1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: hesx1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox expressed in ES cells 1
translation: MATLRHPDLAGGLKADSQLAGTCSAAERKVARCPFTIESILGLGRKEKTTCAVAPHRPWAEMLNVAASPGTSCPISSEGYCHLPGGGKVDQGGDGARWCGHREDLFSPPNCCWFRGRRPRTAFTRRQIEVLEEEFRQNCYPGIDVREELARKLALDEDRIQIWFQNRRAKLKRSHRESQFLMVKNALISSDVQRQKPGARL
SIO_010081: hesx1
subclass of: SO_0000673
so part of: hesx1
location: complement(join(2752416..2752538,2752871..2752972,2755326..2755507,2756683..2756881))
location: region:2752416-2756881:-1
so has part: feature:2756683-2756881:-1:exon
so has part: feature:2755326-2755507:-1:exon
so has part: feature:2752871-2752972:-1:exon
so has part: feature:2752416-2752538:-1:exon

XP_032893234.1
type: Protein
SIO_000068: ncbiprotein

position:2752416:-1
position: 2752416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2756683-2756881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2755326-2755507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2752871-2752972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2752416-2752538:-1:exon

appl1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: appl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2760032..2796387
location: region:2760032-2796387:1
so has part: feature:2760032-2796387:1:exon
subclass of: SO_0000010

116983043
type: Gene
SIO_000068: ncbigene

position:2760032:1
position: 2760032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2796387:1
position: 2796387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2760032-2796387:1:exon

appl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: appl1
product: adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033036584.1
SIO_010081: appl1
subclass of: SO_0000673
so part of: appl1
location: join(2760032..2760243,2767022..2767120,2767939..2767998,2770041..2770112,2771609..2771696,2772657..2772698,2773941..2773999,2774399..2774545,2774951..2775033,2776522..2776680,2778141..2778329,2779114..2779156,2781078..2781134,2782476..2782570,2784677..2784853,2786939..2786991,2788350..2788524,2788625..2788661,2790097..2790243,2791591..2791641,2793085..2793174,2795817..2796387)
location: region:2760032-2796387:1
so has part: feature:2760032-2760243:1:exon
so has part: feature:2767022-2767120:1:exon
so has part: feature:2767939-2767998:1:exon
so has part: feature:2770041-2770112:1:exon
so has part: feature:2771609-2771696:1:exon
so has part: feature:2772657-2772698:1:exon
so has part: feature:2773941-2773999:1:exon
so has part: feature:2774399-2774545:1:exon
so has part: feature:2774951-2775033:1:exon
so has part: feature:2776522-2776680:1:exon
so has part: feature:2778141-2778329:1:exon
so has part: feature:2779114-2779156:1:exon
so has part: feature:2781078-2781134:1:exon
so has part: feature:2782476-2782570:1:exon
so has part: feature:2784677-2784853:1:exon
so has part: feature:2786939-2786991:1:exon
so has part: feature:2788350-2788524:1:exon
so has part: feature:2788625-2788661:1:exon
so has part: feature:2790097-2790243:1:exon
so has part: feature:2791591-2791641:1:exon
so has part: feature:2793085-2793174:1:exon
so has part: feature:2795817-2796387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2760032-2760243:1:exon

position:2760243:1
position: 2760243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2767022-2767120:1:exon

position:2767022:1
position: 2767022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2767120:1
position: 2767120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2767939-2767998:1:exon

position:2767939:1
position: 2767939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2767998:1
position: 2767998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2770041-2770112:1:exon

position:2770041:1
position: 2770041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2770112:1
position: 2770112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2771609-2771696:1:exon

position:2771609:1
position: 2771609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2771696:1
position: 2771696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2772657-2772698:1:exon

position:2772657:1
position: 2772657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2772698:1
position: 2772698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2773941-2773999:1:exon

position:2773941:1
position: 2773941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2773999:1
position: 2773999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2774399-2774545:1:exon

position:2774399:1
position: 2774399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2774545:1
position: 2774545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2774951-2775033:1:exon

position:2774951:1
position: 2774951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2775033:1
position: 2775033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2776522-2776680:1:exon

position:2776522:1
position: 2776522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2776680:1
position: 2776680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2778141-2778329:1:exon

position:2778141:1
position: 2778141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2778329:1
position: 2778329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2779114-2779156:1:exon

position:2779114:1
position: 2779114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2779156:1
position: 2779156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2781078-2781134:1:exon

position:2781078:1
position: 2781078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2781134:1
position: 2781134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2782476-2782570:1:exon

position:2782476:1
position: 2782476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2782570:1
position: 2782570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2784677-2784853:1:exon

position:2784677:1
position: 2784677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2784853:1
position: 2784853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2786939-2786991:1:exon

position:2786939:1
position: 2786939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2786991:1
position: 2786991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2788350-2788524:1:exon

position:2788350:1
position: 2788350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2788524:1
position: 2788524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2788625-2788661:1:exon

position:2788625:1
position: 2788625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2788661:1
position: 2788661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2790097-2790243:1:exon

position:2790097:1
position: 2790097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2790243:1
position: 2790243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2791591-2791641:1:exon

position:2791591:1
position: 2791591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2791641:1
position: 2791641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2793085-2793174:1:exon

position:2793085:1
position: 2793085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2793174:1
position: 2793174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2795817-2796387:1:exon

position:2795817:1
position: 2795817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

appl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: appl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DCC-interacting protein 13-alpha
translation: MPGIDKLPVEETLEDSPQTRSLLGVFEEDAAAVSSYTSQLYNAMQRIYNAQNELSTATHLTSKLLKEYKQQRFPLGGDDEVMTSTLQQFAQVIDELSSCHAVLSTQLADAMMFPITQFKEKHLKEMLTLNEVFAIASHDHDLAINKYSRLSKRRENEKIKMEVTEDLYTSRKKQHQTMMHYFSALNMLQYKKKIALLEPLLGYMLAQINFFKMGSEHMTQQLEEFLANIGTSVQGVRREMETEQDLMHQTIQDLEVASDSLYLPDPDTKLSNVNRNLTRKTGYMNTRNKTRLVSSTWERHYYFTQGGNLMRQARGDVAGGLVSDLDNCTVMAVDCDDRRYCFQITAFDGKRSVVVQAESKKECEEWISTINNISKRIYLSENPEELAARVNQTALEAVTPSPSFQQRHDSSIKPAVHNRARPPPTNSPSSHGSESPALSAISLDSIVAPDTPIQFDIISPVSEDLSNLAKTSGSRRTNPFGESGEPKTQESEESILHQLFIVRFLGSMEVKTEESSDVIYETMRQILAARAIHNIFRMTESHLLITCDSLKLIDPQTQVTRLRFPLHNVVLCATHKENRRLYGFVLHTGGNRTEGRSLSVCYVFESNNEGEKICDSVGLAKQIALQSQMDRQTTDKQKELDREKQRQLKELDKQKQIDKDLEEQSQLIAASSRPNQASGEGQFVALGNNSQSEDSDTADDGKTKKKESEA
SIO_010081: appl1
subclass of: SO_0000673
so part of: appl1
location: join(2760190..2760243,2767022..2767120,2767939..2767998,2770041..2770112,2771609..2771696,2772657..2772698,2773941..2773999,2774399..2774545,2774951..2775033,2776522..2776680,2778141..2778329,2779114..2779156,2781078..2781134,2782476..2782570,2784677..2784853,2786939..2786991,2788350..2788524,2788625..2788661,2790097..2790243,2791591..2791641,2793085..2793174,2795817..2795972)
location: region:2760190-2795972:1
so has part: feature:2760190-2760243:1:exon
so has part: feature:2767022-2767120:1:exon
so has part: feature:2767939-2767998:1:exon
so has part: feature:2770041-2770112:1:exon
so has part: feature:2771609-2771696:1:exon
so has part: feature:2772657-2772698:1:exon
so has part: feature:2773941-2773999:1:exon
so has part: feature:2774399-2774545:1:exon
so has part: feature:2774951-2775033:1:exon
so has part: feature:2776522-2776680:1:exon
so has part: feature:2778141-2778329:1:exon
so has part: feature:2779114-2779156:1:exon
so has part: feature:2781078-2781134:1:exon
so has part: feature:2782476-2782570:1:exon
so has part: feature:2784677-2784853:1:exon
so has part: feature:2786939-2786991:1:exon
so has part: feature:2788350-2788524:1:exon
so has part: feature:2788625-2788661:1:exon
so has part: feature:2790097-2790243:1:exon
so has part: feature:2791591-2791641:1:exon
so has part: feature:2793085-2793174:1:exon
so has part: feature:2795817-2795972:1:exon

XP_032892475.1
type: Protein
SIO_000068: ncbiprotein

position:2760190:1
position: 2760190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2795972:1
position: 2795972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2760190-2760243:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2767022-2767120:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2767939-2767998:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2770041-2770112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2771609-2771696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2772657-2772698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2773941-2773999:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2774399-2774545:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2774951-2775033:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2776522-2776680:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2778141-2778329:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2779114-2779156:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2781078-2781134:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2782476-2782570:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2784677-2784853:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2786939-2786991:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2788350-2788524:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2788625-2788661:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2790097-2790243:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2791591-2791641:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2793085-2793174:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2795817-2795972:1:exon

asb14
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: asb14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2799616..2812724)
location: region:2799616-2812724:-1
so has part: feature:2799616-2812724:-1:exon
subclass of: SO_0000010

116983044
type: Gene
SIO_000068: ncbigene

position:2799616:-1
position: 2799616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2812724:-1
position: 2812724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2799616-2812724:-1:exon

asb14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: asb14
product: ankyrin repeat and SOCS box containing 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033036585.1
SIO_010081: asb14
subclass of: SO_0000673
so part of: asb14
location: complement(join(2799616..2800408,2800916..2801069,2802256..2802799,2803732..2803903,2805238..2805483,2806581..2806739,2807796..2807927,2809068..2809117,2810732..2810917,2812627..2812724))
location: region:2799616-2812724:-1
so has part: feature:2812627-2812724:-1:exon
so has part: feature:2810732-2810917:-1:exon
so has part: feature:2809068-2809117:-1:exon
so has part: feature:2807796-2807927:-1:exon
so has part: feature:2806581-2806739:-1:exon
so has part: feature:2805238-2805483:-1:exon
so has part: feature:2803732-2803903:-1:exon
so has part: feature:2802256-2802799:-1:exon
so has part: feature:2800916-2801069:-1:exon
so has part: feature:2799616-2800408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2812627-2812724:-1:exon

position:2812627:-1
position: 2812627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2810732-2810917:-1:exon

position:2810732:-1
position: 2810732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2810917:-1
position: 2810917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2809068-2809117:-1:exon

position:2809068:-1
position: 2809068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2809117:-1
position: 2809117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2807796-2807927:-1:exon

position:2807796:-1
position: 2807796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2807927:-1
position: 2807927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2806581-2806739:-1:exon

position:2806581:-1
position: 2806581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2806739:-1
position: 2806739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2805238-2805483:-1:exon

position:2805238:-1
position: 2805238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2805483:-1
position: 2805483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2803732-2803903:-1:exon

position:2803732:-1
position: 2803732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2803903:-1
position: 2803903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2802256-2802799:-1:exon

position:2802256:-1
position: 2802256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2802799:-1
position: 2802799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2800916-2801069:-1:exon

position:2800916:-1
position: 2800916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2801069:-1
position: 2801069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2799616-2800408:-1:exon

position:2800408:-1
position: 2800408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

asb14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: asb14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 14
translation: MDVPATDEEWDDDAILQHAIEESLSGICTGDSCPVTEVEELRSLQSTVNREIVEAIKTGLEAEIVRLSVHQAAFDEADERGWIPLHEAAVKLNQAVLAATLQASGPGAGERRSLRGETPLHLAAELNLAGNVQLLLENGCDPNSKNEEGDSVLITATRTECVDVVTLLLGFGVAVNMRCVNERTALHEAAKLGRVDIVESLLRSGASVDPHSAFGLTPLALAAQNGRTEVVKLLLQKGADVLSQASDGVSVLFEAASVENGECLALLLEYGADANVPKYTGHLPIHRATYRGYYRLVKQLIEVTDISAIQESGISPLHSAAAGGHQQCLQLLLRSGFDVNFMLSPQLQRGYCDRRKSALYFAVSNNDVHSARLLLEAGALANQDPINCLQLALRLANHQLIHLLLRHGANVNYYCRVNTTHFPSALQYALTDQRTLRLLFSYGYDIQRCFHCPHENKVHPLFTHEGWSPTVIKDNMFCEVITLAWLKHLSGNVVRVMLDYVASVTLCSKLRAVLEQQSEWAEITHIMGNPRCLQHLCRLTVRRCMGRMRLRCPVFLTFLPLPQRLKEYILFKEYDPYNGP
SIO_010081: asb14
subclass of: SO_0000673
so part of: asb14
location: complement(join(2800248..2800408,2800916..2801069,2802256..2802799,2803732..2803903,2805238..2805483,2806581..2806739,2807796..2807927,2809068..2809117,2810732..2810856))
location: region:2800248-2810856:-1
so has part: feature:2810732-2810856:-1:exon
so has part: feature:2809068-2809117:-1:exon
so has part: feature:2807796-2807927:-1:exon
so has part: feature:2806581-2806739:-1:exon
so has part: feature:2805238-2805483:-1:exon
so has part: feature:2803732-2803903:-1:exon
so has part: feature:2802256-2802799:-1:exon
so has part: feature:2800916-2801069:-1:exon
so has part: feature:2800248-2800408:-1:exon

XP_032892476.1
type: Protein
SIO_000068: ncbiprotein

position:2800248:-1
position: 2800248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2810856:-1
position: 2810856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2810732-2810856:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2809068-2809117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2807796-2807927:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2806581-2806739:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2805238-2805483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2803732-2803903:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2802256-2802799:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2800916-2801069:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2800248-2800408:-1:exon

dnah12
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: dnah12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2816245..2943698)
location: region:2816245-2943698:-1
so has part: feature:2816245-2943698:-1:exon
subclass of: SO_0000010

116983046
type: Gene
SIO_000068: ncbigene

position:2816245:-1
position: 2816245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2943698:-1
position: 2943698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2816245-2943698:-1:exon

dnah12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dnah12
product: dynein axonemal heavy chain 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033036586.1
SIO_010081: dnah12
subclass of: SO_0000673
so part of: dnah12
location: complement(join(2816245..2816748,2818123..2818190,2818791..2818882,2819969..2820106,2822757..2822961,2823580..2823683,2824878..2825066,2827768..2828001,2829708..2829845,2831150..2831290,2832076..2832329,2834195..2834345,2835623..2835767,2836897..2837055,2838282..2838422,2840154..2840326,2842195..2842387,2844925..2845117,2846133..2846347,2848472..2848617,2850060..2850207,2853395..2853636,2856225..2856365,2859789..2859878,2863367..2863498,2864107..2864283,2865869..2865949,2866750..2866912,2869295..2869428,2872079..2872273,2872942..2873103,2874051..2874243,2876065..2876243,2877028..2877327,2878257..2878512,2880059..2880225,2881565..2881703,2884691..2884842,2885775..2885963,2887492..2887611,2889382..2889570,2890165..2890248,2891489..2891629,2894521..2894704,2896753..2896862,2898113..2898232,2899495..2899740,2900889..2901128,2902081..2902233,2903783..2903955,2904774..2904930,2906471..2906590,2908395..2908677,2909793..2909914,2911033..2911227,2913623..2913823,2914965..2915150,2916900..2917146,2918250..2918443,2921486..2921620,2922546..2922671,2923609..2923744,2924714..2924892,2925574..2925665,2926547..2926709,2927077..2927265,2927911..2928106,2929298..2929456,2932356..2932431,2937889..2938078,2940782..2940808,2940949..2941039,2942437..2942612,2943577..2943698))
location: region:2816245-2943698:-1
so has part: feature:2943577-2943698:-1:exon
so has part: feature:2942437-2942612:-1:exon
so has part: feature:2940949-2941039:-1:exon
so has part: feature:2940782-2940808:-1:exon
so has part: feature:2937889-2938078:-1:exon
so has part: feature:2932356-2932431:-1:exon
so has part: feature:2929298-2929456:-1:exon
so has part: feature:2927911-2928106:-1:exon
so has part: feature:2927077-2927265:-1:exon
so has part: feature:2926547-2926709:-1:exon
so has part: feature:2925574-2925665:-1:exon
so has part: feature:2924714-2924892:-1:exon
so has part: feature:2923609-2923744:-1:exon
so has part: feature:2922546-2922671:-1:exon
so has part: feature:2921486-2921620:-1:exon
so has part: feature:2918250-2918443:-1:exon
so has part: feature:2916900-2917146:-1:exon
so has part: feature:2914965-2915150:-1:exon
so has part: feature:2913623-2913823:-1:exon
so has part: feature:2911033-2911227:-1:exon
so has part: feature:2909793-2909914:-1:exon
so has part: feature:2908395-2908677:-1:exon
so has part: feature:2906471-2906590:-1:exon
so has part: feature:2904774-2904930:-1:exon
so has part: feature:2903783-2903955:-1:exon
so has part: feature:2902081-2902233:-1:exon
so has part: feature:2900889-2901128:-1:exon
so has part: feature:2899495-2899740:-1:exon
so has part: feature:2898113-2898232:-1:exon
so has part: feature:2896753-2896862:-1:exon
so has part: feature:2894521-2894704:-1:exon
so has part: feature:2891489-2891629:-1:exon
so has part: feature:2890165-2890248:-1:exon
so has part: feature:2889382-2889570:-1:exon
so has part: feature:2887492-2887611:-1:exon
so has part: feature:2885775-2885963:-1:exon
so has part: feature:2884691-2884842:-1:exon
so has part: feature:2881565-2881703:-1:exon
so has part: feature:2880059-2880225:-1:exon
so has part: feature:2878257-2878512:-1:exon
so has part: feature:2877028-2877327:-1:exon
so has part: feature:2876065-2876243:-1:exon
so has part: feature:2874051-2874243:-1:exon
so has part: feature:2872942-2873103:-1:exon
so has part: feature:2872079-2872273:-1:exon
so has part: feature:2869295-2869428:-1:exon
so has part: feature:2866750-2866912:-1:exon
so has part: feature:2865869-2865949:-1:exon
so has part: feature:2864107-2864283:-1:exon
so has part: feature:2863367-2863498:-1:exon
so has part: feature:2859789-2859878:-1:exon
so has part: feature:2856225-2856365:-1:exon
so has part: feature:2853395-2853636:-1:exon
so has part: feature:2850060-2850207:-1:exon
so has part: feature:2848472-2848617:-1:exon
so has part: feature:2846133-2846347:-1:exon
so has part: feature:2844925-2845117:-1:exon
so has part: feature:2842195-2842387:-1:exon
so has part: feature:2840154-2840326:-1:exon
so has part: feature:2838282-2838422:-1:exon
so has part: feature:2836897-2837055:-1:exon
so has part: feature:2835623-2835767:-1:exon
so has part: feature:2834195-2834345:-1:exon
so has part: feature:2832076-2832329:-1:exon
so has part: feature:2831150-2831290:-1:exon
so has part: feature:2829708-2829845:-1:exon
so has part: feature:2827768-2828001:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2943577-2943698:-1:exon

position:2943577:-1
position: 2943577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2942437-2942612:-1:exon

position:2942437:-1
position: 2942437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2942612:-1
position: 2942612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2940949-2941039:-1:exon

position:2940949:-1
position: 2940949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2941039:-1
position: 2941039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2940782-2940808:-1:exon

position:2940782:-1
position: 2940782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2940808:-1
position: 2940808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2937889-2938078:-1:exon

position:2937889:-1
position: 2937889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2938078:-1
position: 2938078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2932356-2932431:-1:exon

position:2932356:-1
position: 2932356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2932431:-1
position: 2932431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2929298-2929456:-1:exon

position:2929298:-1
position: 2929298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2929456:-1
position: 2929456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2927911-2928106:-1:exon

position:2927911:-1
position: 2927911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2928106:-1
position: 2928106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2927077-2927265:-1:exon

position:2927077:-1
position: 2927077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2927265:-1
position: 2927265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2926547-2926709:-1:exon

position:2926547:-1
position: 2926547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2926709:-1
position: 2926709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2925574-2925665:-1:exon

position:2925574:-1
position: 2925574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2925665:-1
position: 2925665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2924714-2924892:-1:exon

position:2924714:-1
position: 2924714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2924892:-1
position: 2924892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2923609-2923744:-1:exon

position:2923609:-1
position: 2923609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2923744:-1
position: 2923744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2922546-2922671:-1:exon

position:2922546:-1
position: 2922546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2922671:-1
position: 2922671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2921486-2921620:-1:exon

position:2921486:-1
position: 2921486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2921620:-1
position: 2921620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2918250-2918443:-1:exon

position:2918250:-1
position: 2918250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2918443:-1
position: 2918443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2916900-2917146:-1:exon

position:2916900:-1
position: 2916900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2917146:-1
position: 2917146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2914965-2915150:-1:exon

position:2914965:-1
position: 2914965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2915150:-1
position: 2915150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2913623-2913823:-1:exon

position:2913623:-1
position: 2913623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2913823:-1
position: 2913823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2911033-2911227:-1:exon

position:2911033:-1
position: 2911033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2911227:-1
position: 2911227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2909793-2909914:-1:exon

position:2909793:-1
position: 2909793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2909914:-1
position: 2909914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2908395-2908677:-1:exon

position:2908395:-1
position: 2908395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2908677:-1
position: 2908677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2906471-2906590:-1:exon

position:2906471:-1
position: 2906471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2906590:-1
position: 2906590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2904774-2904930:-1:exon

position:2904774:-1
position: 2904774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2904930:-1
position: 2904930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2903783-2903955:-1:exon

position:2903783:-1
position: 2903783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2903955:-1
position: 2903955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2902081-2902233:-1:exon

position:2902081:-1
position: 2902081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2902233:-1
position: 2902233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2900889-2901128:-1:exon

position:2900889:-1
position: 2900889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2901128:-1
position: 2901128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2899495-2899740:-1:exon

position:2899495:-1
position: 2899495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2899740:-1
position: 2899740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2898113-2898232:-1:exon

position:2898113:-1
position: 2898113
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 30
SIO_000628: feature:2896753-2896862:-1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:2894521-2894704:-1:exon

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urn:…
SIO_000300: 32
SIO_000628: feature:2891489-2891629:-1:exon

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urn:…
SIO_000300: 33
SIO_000628: feature:2890165-2890248:-1:exon

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urn:…
SIO_000300: 34
SIO_000628: feature:2889382-2889570:-1:exon

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urn:…
SIO_000300: 35
SIO_000628: feature:2887492-2887611:-1:exon

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urn:…
SIO_000300: 36
SIO_000628: feature:2885775-2885963:-1:exon

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urn:…
SIO_000300: 37
SIO_000628: feature:2884691-2884842:-1:exon

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urn:…
SIO_000300: 38
SIO_000628: feature:2881565-2881703:-1:exon

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urn:…
SIO_000300: 39
SIO_000628: feature:2880059-2880225:-1:exon

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urn:…
SIO_000300: 40
SIO_000628: feature:2878257-2878512:-1:exon

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urn:…
SIO_000300: 41
SIO_000628: feature:2877028-2877327:-1:exon

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urn:…
SIO_000300: 42
SIO_000628: feature:2876065-2876243:-1:exon

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urn:…
SIO_000300: 43
SIO_000628: feature:2874051-2874243:-1:exon

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urn:…
SIO_000300: 44
SIO_000628: feature:2872942-2873103:-1:exon

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urn:…
SIO_000300: 45
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urn:…
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urn:…
SIO_000300: 47
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urn:…
SIO_000300: 48
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urn:…
SIO_000300: 49
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urn:…
SIO_000300: 50
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urn:…
SIO_000300: 51
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SIO_000300: 52
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urn:…
SIO_000300: 53
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urn:…
SIO_000300: 54
SIO_000628: feature:2850060-2850207:-1:exon

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SIO_000300: 55
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urn:…
SIO_000300: 56
SIO_000628: feature:2846133-2846347:-1:exon

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SIO_000300: 57
SIO_000628: feature:2844925-2845117:-1:exon

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urn:…
SIO_000300: 58
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urn:…
SIO_000300: 59
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urn:…
SIO_000300: 61
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urn:…
SIO_000300: 62
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urn:…
SIO_000300: 63
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SIO_000300: 64
SIO_000628: feature:2832076-2832329:-1:exon

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SIO_000300: 65
SIO_000628: feature:2831150-2831290:-1:exon

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urn:…
SIO_000300: 66
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urn:…
SIO_000300: 68
SIO_000628: feature:2824878-2825066:-1:exon

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urn:…
SIO_000300: 69
SIO_000628: feature:2823580-2823683:-1:exon

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SIO_000300: 70
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SIO_000300: 71
SIO_000628: feature:2819969-2820106:-1:exon

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urn:…
SIO_000300: 72
SIO_000628: feature:2818791-2818882:-1:exon

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urn:…
SIO_000300: 73
SIO_000628: feature:2818123-2818190:-1:exon

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urn:…
SIO_000300: 74
SIO_000628: feature:2816245-2816748:-1:exon

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reference: sequence
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dnah12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dnah12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein heavy chain 12, axonemal
translation: MKATKKVRNVCAPQSDDIRSRLPPIHPTPESIVNNEISTSKLMSYSSSNYYQQLLGKIMIDDARRIYDEVMQEIEKKEPTPPEPQFPSTMNSKQKQQRLNYLFMKRCVESSPVVPIQQQWLDSILTLVPPSLREGKIRELIVRDLFEEVTKDFEKSMKRFLVRSVLVKPEVKGLEYEDSEPLPQEPTGLDFSNPWHESFVKAREEIKKHLYILHPVLQAVLDLGYLTFAHLLLLDLSDCRGKGPIECESFKNNVVIEHGKMEKKIMTTWYPKVLSLLTDKDKIKQIKSERIECFYCSASVLIGNQLQEFLGRTVKAYIDLFDDVDKYKMPQFKMDLIFDEDKMEFYPTYSDLEETVLFVITKIEDAMQNVLTVQSWLSENNMDEIENIKAKPSADLLKWAYATLKVTVKNNFQGAAEHFQQYVDNYDWLINGTAKQRIQTFMEEDHTFDEYTEFIDQFRHLALEIISLQKVAHFHMVRLECEDIKHGLSEKAKGFAEMLLDGLVAKHREENERICQEFENIVDKALNIPEATKEMLEMIDYVNEAKSKGITALNERIKELHLRLEYLLDVYIFDQTDLDLHVTVLLWPKKIVPIFDENDDLVEKAKLKGETELLAKREKLIVELEKLSHRSEEFTQCSELDLMPQYVNDVRTVQKRLQDAEELIEYINSEEVLYKWDLTTYPLADIIKVNTEPFQKLFALVLKWQRSEKKWMDGSFLDLNGESLEAEVDEYFREVYKMLKYFRQKEKKAELEKKKVAPRRRVVAEEEVAEEKKENATMAMCDVVLSQIRDFKEVVPIVSILCNPGMRPRHWSQMSEVVGYDLTPDSGTTLRKMLRLNLTPFLEKFEETSAAASKEFSLEKAMHTMDEAWESISFNTSLYRDTGVSILSAVDEIQTILDDQIIKTQTMRGSPFCKPFEDKIKHWEERLINIQETIDEWLKVQAQWLYLDPIFSSEDIMQQMPEEGRLFQTVDRNWKDIMRHCVKNPKVLTATAMTGLLAKLQDCNSLLEKIMKGLNAYLEKKRLFFPRFFFLSNDEMLEILSETKDPLRVQPHLKKCFEGINRLEFLPNLDISAMFSSEGERVELIQRISTSEARGAVEKWLVQVEDIMLRSVLDVIARSQQDYPERKRNEWVVSWPGQVVICVSQIFWTAEVEKAIQIGSQGLNVYNGKLQQQLNNIVELVRGKLSKQTRITLGALVTIDVHSRDVVEGLIEKEVSSQMDFNWLAQLRYYWTNENVRVHIINCNVKYAYEYLGNSPRLVITPLTDRCYRTLIGAFYLDLGGAPEGPAGTGKTESVKDLAKAVAVQCVVFNCSDGLDYIAMGKFFKGLASSGAWACFDEFNRIELEVLSVVAQQILCIQRAKQNAMETFVFEGTELRLNPNCFVAITMNPGYAGRSELPDNLKVLFRTVAMMVPNYALIAEISLYSYGFLNAKPLSVKIVMTYRLCSEQLSSQFHYDYGMRAVKAVLVAAGNLKLKFPTENEDVLLLRSIKDVNEPKFLSHDIPLFSGITSDLFPGIVLPEADYQLFLECSVECCFKQGVQPVKPFLAKMIQTYEMMIVRHGFMLVGEPFSGKTKTLQVLADTLTLMNERGLNEEEKVVHRTVNPKAITMGQLFGQFDLVSHEWTDGIVANTFREFASAETPDRKWVIFDGPIDTLWIESMNTVLDDNKKLCLMSGEIIQMSQQMSLIFEVMDLSQASPATVSRCGMIYLEPAQLGWKPLVVSWLNGLAKVVPQKDLRVMLEDLFDWLVPVALHVLRKQCKELVPTTDSNTVISLTRLFDMLLWDQLAVDHDSKNVRIWIMAAFTFSLIWSIGASCDMAGRIIFDAFLREIVSIKSSYQPLPASVGKWECPFEEKGLVYDYMYEFKGRGHWVHWNESIKNINLGDKTTKVQDIIVPTMDTVRYTYLLDFCVTSGKPLLFVGHTGTGKSLYVQDKLMNNLNKELYVPFFINFSARTSANQVQTIIMSRLDKRRKGVYGPPMGKKCVIFVDDMNMPALEIYGA…
SIO_010081: dnah12
subclass of: SO_0000673
so part of: dnah12
location: complement(join(2816558..2816748,2818123..2818190,2818791..2818882,2819969..2820106,2822757..2822961,2823580..2823683,2824878..2825066,2827768..2828001,2829708..2829845,2831150..2831290,2832076..2832329,2834195..2834345,2835623..2835767,2836897..2837055,2838282..2838422,2840154..2840326,2842195..2842387,2844925..2845117,2846133..2846347,2848472..2848617,2850060..2850207,2853395..2853636,2856225..2856365,2859789..2859878,2863367..2863498,2864107..2864283,2865869..2865949,2866750..2866912,2869295..2869428,2872079..2872273,2872942..2873103,2874051..2874243,2876065..2876243,2877028..2877327,2878257..2878512,2880059..2880225,2881565..2881703,2884691..2884842,2885775..2885963,2887492..2887611,2889382..2889570,2890165..2890248,2891489..2891629,2894521..2894704,2896753..2896862,2898113..2898232,2899495..2899740,2900889..2901128,2902081..2902233,2903783..2903955,2904774..2904930,2906471..2906590,2908395..2908677,2909793..2909914,2911033..2911227,2913623..2913823,2914965..2915150,2916900..2917146,2918250..2918443,2921486..2921620,2922546..2922671,2923609..2923744,2924714..2924892,2925574..2925665,2926547..2926709,2927077..2927265,2927911..2928106,2929298..2929456,2932356..2932431,2937889..2938078,2940782..2940808,2940949..2941039,2942437..2942612))
location: region:2816558-2942612:-1
so has part: feature:2942437-2942612:-1:exon
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so has part: feature:2887492-2887611:-1:exon
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so has part: feature:2872942-2873103:-1:exon
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so has part: feature:2850060-2850207:-1:exon
so has part: feature:2848472-2848617:-1:exon
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so has part: feature:2840154-2840326:-1:exon
so has part: feature:2838282-2838422:-1:exon
so has part: feature:2836897-2837055:-1:exon
so has part: feature:2835623-2835767:-1:exon
so has part: feature:2834195-2834345:-1:exon
so has part: feature:2832076-2832329:-1:exon
so has part: feature:2831150-2831290:-1:exon
so has part: feature:2829708-2829845:-1:exon
so has part: feature:2827768-2828001:-1:exon

XP_032892477.1
type: Protein
SIO_000068: ncbiprotein

position:2816558:-1
position: 2816558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2942437-2942612:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2940949-2941039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2940782-2940808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2937889-2938078:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2932356-2932431:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2929298-2929456:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2927911-2928106:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2927077-2927265:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2926547-2926709:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2925574-2925665:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2924714-2924892:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2923609-2923744:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2922546-2922671:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2921486-2921620:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2918250-2918443:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2916900-2917146:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2914965-2915150:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2913623-2913823:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2911033-2911227:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2909793-2909914:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2908395-2908677:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2906471-2906590:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2904774-2904930:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2903783-2903955:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2902081-2902233:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2900889-2901128:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2899495-2899740:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2898113-2898232:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2896753-2896862:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2894521-2894704:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2891489-2891629:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2890165-2890248:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2889382-2889570:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2887492-2887611:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2885775-2885963:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2884691-2884842:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2881565-2881703:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2880059-2880225:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2878257-2878512:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2877028-2877327:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2876065-2876243:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2874051-2874243:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2872942-2873103:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2872079-2872273:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2869295-2869428:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2866750-2866912:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2865869-2865949:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2864107-2864283:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2863367-2863498:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2859789-2859878:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2856225-2856365:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2853395-2853636:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2850060-2850207:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:2848472-2848617:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:2846133-2846347:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:2844925-2845117:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:2842195-2842387:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:2840154-2840326:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:2838282-2838422:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:2836897-2837055:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:2835623-2835767:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:2834195-2834345:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:2832076-2832329:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:2831150-2831290:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:2829708-2829845:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:2827768-2828001:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:2824878-2825066:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:2823580-2823683:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:2822757-2822961:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:2819969-2820106:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:2818791-2818882:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:2818123-2818190:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:2816558-2816748:-1:exon

rps23
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rps23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2948424..2953042)
location: region:2948424-2953042:-1
so has part: feature:2948424-2953042:-1:exon
subclass of: SO_0000010

116983048
type: Gene
SIO_000068: ncbigene

position:2948424:-1
position: 2948424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2953042:-1
position: 2953042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2948424-2953042:-1:exon

rps23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rps23
product: ribosomal protein S23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_033036589.1
SIO_010081: rps23
subclass of: SO_0000673
so part of: rps23
location: complement(join(2948424..2948634,2951077..2951197,2951741..2951900,2952950..2953042))
location: region:2948424-2953042:-1
so has part: feature:2952950-2953042:-1:exon
so has part: feature:2951741-2951900:-1:exon
so has part: feature:2951077-2951197:-1:exon
so has part: feature:2948424-2948634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2952950-2953042:-1:exon

position:2952950:-1
position: 2952950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2951741-2951900:-1:exon

position:2951741:-1
position: 2951741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2951900:-1
position: 2951900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2951077-2951197:-1:exon

position:2951077:-1
position: 2951077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2951197:-1
position: 2951197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2948424-2948634:-1:exon

position:2948634:-1
position: 2948634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rps23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rps23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S23
translation: MGKCRGLRTARKLRNLRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS
SIO_010081: rps23
subclass of: SO_0000673
so part of: rps23
location: complement(join(2948488..2948634,2951077..2951197,2951741..2951900,2952950..2952953))
location: region:2948488-2952953:-1
so has part: feature:2952950-2952953:-1:exon
so has part: feature:2951741-2951900:-1:exon
so has part: feature:2951077-2951197:-1:exon
so has part: feature:2948488-2948634:-1:exon

XP_032892480.1
type: Protein
SIO_000068: ncbiprotein

position:2948488:-1
position: 2948488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2952953:-1
position: 2952953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2952950-2952953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2951741-2951900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2951077-2951197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2948488-2948634:-1:exon

pde12
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: pde12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2955111..2962581
location: region:2955111-2962581:1
so has part: feature:2955111-2962581:1:exon
subclass of: SO_0000010

116983047
type: Gene
SIO_000068: ncbigene

position:2955111:1
position: 2955111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2962581:1
position: 2962581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2955111-2962581:1:exon

pde12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pde12
product: phosphodiesterase 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033036588.1
SIO_010081: pde12
subclass of: SO_0000673
so part of: pde12
location: join(2955111..2955467,2955744..2956933,2959201..2959279,2961334..2962581)
location: region:2955111-2962581:1
so has part: feature:2955111-2955467:1:exon
so has part: feature:2955744-2956933:1:exon
so has part: feature:2959201-2959279:1:exon
so has part: feature:2961334-2962581:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2955111-2955467:1:exon

position:2955467:1
position: 2955467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2955744-2956933:1:exon

position:2955744:1
position: 2955744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2956933:1
position: 2956933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2959201-2959279:1:exon

position:2959201:1
position: 2959201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2959279:1
position: 2959279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2961334-2962581:1:exon

position:2961334:1
position: 2961334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pde12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pde12
product: phosphodiesterase 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033036587.1
SIO_010081: pde12
subclass of: SO_0000673
so part of: pde12
location: join(2955112..2956933,2959201..2959279,2961334..2962581)
location: region:2955112-2962581:1
so has part: feature:2955112-2956933:1:exon
so has part: feature:2959201-2959279:1:exon
so has part: feature:2961334-2962581:1:exon

position:2955112:1
position: 2955112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2955112-2956933:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2959201-2959279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2961334-2962581:1:exon

pde12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pde12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2',5'-phosphodiesterase 12 isoform X1
translation: MPALLGRALRLLQRSLAAGPALGRGSSLGPASAPGPGSSSSVGPASAPVSGPAPGSSAGPGSAPRSSSSAGPASAPGSGLAPFPGPGSSPAPGSGPASAPGPSLSPAPGSVPSSGPDSTLGSASASGLPPGPPQAPGPYPMPGPAMQTAVVRCVPSETKMTIALEVCGGRRRLEREQSECLRAALARIAHHLLKAQAGARKGKKGAAQASAQAQEQAPDQASVQAQEQAPAISLYVGEQAIPGDTSNAEAWQEGAELRVGSVRYRVQRNPPGLTLLALPASMLAGFPVCPRLQVEFGQAEDCSFEWLQETEAGRWEPVAYGRVFTPPPNLVGRRLKLRCCPGDGSRFGPESEALSSGPVQLGPEACTFDGRHSFTQQAAAGSVLRVVSYNILADIYAQTELSKTTLYPYCPPHALHAHYRENLVKKEVLGYQADLLCLQEVDKTLFNHSLRPALDAFGYQGLFRLKGKQHEGLATFYRASRFQLLSQHDVTLGQALASDPLHTHLLQDVAANPNVQEKVLHRSTTLQVCVLQSLEDPSRKVCVANTHLYWHPKGGHIRLIQIAVAFRHLQQITSELHPNTPIIFCGDFNSAPSSGLYDFVTKGSILPDHQDWTSNGEEEQCRMALTHSFKLGSACGEPAYTNYVGGFQGCLDYIFMDEDALEVDRVIPFPPHEEITRHVALPSVSHPSDHIALVCDLKWK
SIO_010081: pde12
subclass of: SO_0000673
so part of: pde12
location: join(2955353..2956933,2959201..2959279,2961334..2961776)
location: region:2955353-2961776:1
so has part: feature:2955353-2956933:1:exon
so has part: feature:2959201-2959279:1:exon
so has part: feature:2961334-2961776:1:exon

XP_032892478.1
type: Protein
SIO_000068: ncbiprotein

position:2955353:1
position: 2955353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2961776:1
position: 2961776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2955353-2956933:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2959201-2959279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2961334-2961776:1:exon

pde12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pde12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2',5'-phosphodiesterase 12 isoform X2
translation: MPALLGRALRLLQRSLAAGPALGRGSSLGPASAPGPGSSPPQAPGPYPMPGPAMQTAVVRCVPSETKMTIALEVCGGRRRLEREQSECLRAALARIAHHLLKAQAGARKGKKGAAQASAQAQEQAPDQASVQAQEQAPAISLYVGEQAIPGDTSNAEAWQEGAELRVGSVRYRVQRNPPGLTLLALPASMLAGFPVCPRLQVEFGQAEDCSFEWLQETEAGRWEPVAYGRVFTPPPNLVGRRLKLRCCPGDGSRFGPESEALSSGPVQLGPEACTFDGRHSFTQQAAAGSVLRVVSYNILADIYAQTELSKTTLYPYCPPHALHAHYRENLVKKEVLGYQADLLCLQEVDKTLFNHSLRPALDAFGYQGLFRLKGKQHEGLATFYRASRFQLLSQHDVTLGQALASDPLHTHLLQDVAANPNVQEKVLHRSTTLQVCVLQSLEDPSRKVCVANTHLYWHPKGGHIRLIQIAVAFRHLQQITSELHPNTPIIFCGDFNSAPSSGLYDFVTKGSILPDHQDWTSNGEEEQCRMALTHSFKLGSACGEPAYTNYVGGFQGCLDYIFMDEDALEVDRVIPFPPHEEITRHVALPSVSHPSDHIALVCDLKWK
SIO_010081: pde12
subclass of: SO_0000673
so part of: pde12
location: join(2955353..2955467,2955744..2956933,2959201..2959279,2961334..2961776)
location: region:2955353-2961776:1
so has part: feature:2955353-2955467:1:exon
so has part: feature:2955744-2956933:1:exon
so has part: feature:2959201-2959279:1:exon
so has part: feature:2961334-2961776:1:exon

XP_032892479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2955353-2955467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2955744-2956933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2959201-2959279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2961334-2961776:1:exon

arf4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: arf4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2967503..2985313)
location: region:2967503-2985313:-1
so has part: feature:2967503-2985313:-1:exon
subclass of: SO_0000010

116983049
type: Gene
SIO_000068: ncbigene

position:2967503:-1
position: 2967503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2985313:-1
position: 2985313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2967503-2985313:-1:exon

arf4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: arf4
product: ADP ribosylation factor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 92 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_033036591.1
SIO_010081: arf4
subclass of: SO_0000673
so part of: arf4
location: complement(join(2967503..2968721,2971841..2971966,2975143..2975214,2975910..2976019,2977381..2977461,2985145..2985313))
location: region:2967503-2985313:-1
so has part: feature:2985145-2985313:-1:exon
so has part: feature:2977381-2977461:-1:exon
so has part: feature:2975910-2976019:-1:exon
so has part: feature:2975143-2975214:-1:exon
so has part: feature:2971841-2971966:-1:exon
so has part: feature:2967503-2968721:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2985145-2985313:-1:exon

position:2985145:-1
position: 2985145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2977381-2977461:-1:exon

position:2977381:-1
position: 2977381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2977461:-1
position: 2977461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2975910-2976019:-1:exon

position:2975910:-1
position: 2975910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2976019:-1
position: 2976019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2975143-2975214:-1:exon

position:2975143:-1
position: 2975143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2975214:-1
position: 2975214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2971841-2971966:-1:exon

position:2971841:-1
position: 2971841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2971966:-1
position: 2971966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2967503-2968721:-1:exon

position:2968721:-1
position: 2968721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

arf4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: arf4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor 4
translation: MGLSISGLFKRYFGSRQMRILMVGLDAAGKTTILYKLKLGDVVTTIPTIGFNVETVEYSRTCFTVWDVGGQDKIRPLWRHYFQNTEGLIFVVDSNDRERIQEAAEELNKMLQEDELRNTVLLVFANKQDLPNALSVTEITNKLGLQNLQNKVWYVQATCASNGNGLYEGLDWLSTELSKS
SIO_010081: arf4
subclass of: SO_0000673
so part of: arf4
location: complement(join(2968635..2968721,2971841..2971966,2975143..2975214,2975910..2976019,2977381..2977461,2985145..2985211))
location: region:2968635-2985211:-1
so has part: feature:2985145-2985211:-1:exon
so has part: feature:2977381-2977461:-1:exon
so has part: feature:2975910-2976019:-1:exon
so has part: feature:2975143-2975214:-1:exon
so has part: feature:2971841-2971966:-1:exon
so has part: feature:2968635-2968721:-1:exon

XP_032892482.1
type: Protein
SIO_000068: ncbiprotein

position:2968635:-1
position: 2968635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2985211:-1
position: 2985211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2985145-2985211:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2977381-2977461:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2975910-2976019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2975143-2975214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2971841-2971966:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2968635-2968721:-1:exon

dennd6a
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: dennd6a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2989373..3026660)
location: region:2989373-3026660:-1
so has part: feature:2989373-3026660:-1:exon
subclass of: SO_0000010

116983050
type: Gene
SIO_000068: ncbigene

position:2989373:-1
position: 2989373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3026660:-1
position: 3026660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2989373-3026660:-1:exon

dennd6a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dennd6a
product: DENN domain containing 6A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033036592.1
SIO_010081: dennd6a
subclass of: SO_0000673
so part of: dennd6a
location: complement(join(2989373..2990171,2990608..2990682,2992129..2992231,2993338..2993447,2993549..2993602,2994203..2994292,2995925..2995989,2999337..2999402,3001968..3002062,3002210..3002305,3003396..3003518,3004185..3004240,3006694..3006756,3009508..3009587,3012907..3013012,3016241..3016321,3017345..3017448,3023367..3023409,3023495..3023533,3026424..3026660))
location: region:2989373-3026660:-1
so has part: feature:3026424-3026660:-1:exon
so has part: feature:3023495-3023533:-1:exon
so has part: feature:3023367-3023409:-1:exon
so has part: feature:3017345-3017448:-1:exon
so has part: feature:3016241-3016321:-1:exon
so has part: feature:3012907-3013012:-1:exon
so has part: feature:3009508-3009587:-1:exon
so has part: feature:3006694-3006756:-1:exon
so has part: feature:3004185-3004240:-1:exon
so has part: feature:3003396-3003518:-1:exon
so has part: feature:3002210-3002305:-1:exon
so has part: feature:3001968-3002062:-1:exon
so has part: feature:2999337-2999402:-1:exon
so has part: feature:2995925-2995989:-1:exon
so has part: feature:2994203-2994292:-1:exon
so has part: feature:2993549-2993602:-1:exon
so has part: feature:2993338-2993447:-1:exon
so has part: feature:2992129-2992231:-1:exon
so has part: feature:2990608-2990682:-1:exon
so has part: feature:2989373-2990171:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3026424-3026660:-1:exon

position:3026424:-1
position: 3026424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3023495-3023533:-1:exon

position:3023495:-1
position: 3023495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3023533:-1
position: 3023533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3023367-3023409:-1:exon

position:3023367:-1
position: 3023367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3023409:-1
position: 3023409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3017345-3017448:-1:exon

position:3017345:-1
position: 3017345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3017448:-1
position: 3017448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3016241-3016321:-1:exon

position:3016241:-1
position: 3016241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3016321:-1
position: 3016321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3012907-3013012:-1:exon

position:3012907:-1
position: 3012907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3013012:-1
position: 3013012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3009508-3009587:-1:exon

position:3009508:-1
position: 3009508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3009587:-1
position: 3009587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3006694-3006756:-1:exon

position:3006694:-1
position: 3006694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3006756:-1
position: 3006756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3004185-3004240:-1:exon

position:3004185:-1
position: 3004185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3004240:-1
position: 3004240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3003396-3003518:-1:exon

position:3003396:-1
position: 3003396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3003518:-1
position: 3003518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3002210-3002305:-1:exon

position:3002210:-1
position: 3002210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3002305:-1
position: 3002305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3001968-3002062:-1:exon

position:3001968:-1
position: 3001968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3002062:-1
position: 3002062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2999337-2999402:-1:exon

position:2999337:-1
position: 2999337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2999402:-1
position: 2999402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2995925-2995989:-1:exon

position:2995925:-1
position: 2995925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2995989:-1
position: 2995989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2994203-2994292:-1:exon

position:2994203:-1
position: 2994203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2994292:-1
position: 2994292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2993549-2993602:-1:exon

position:2993549:-1
position: 2993549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2993602:-1
position: 2993602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2993338-2993447:-1:exon

position:2993338:-1
position: 2993338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2993447:-1
position: 2993447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2992129-2992231:-1:exon

position:2992129:-1
position: 2992129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2992231:-1
position: 2992231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2990608-2990682:-1:exon

position:2990608:-1
position: 2990608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2990682:-1
position: 2990682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2989373-2990171:-1:exon

position:2990171:-1
position: 2990171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dennd6a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dennd6a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DENND6A
translation: MALRALTGPDLDLDLEQLLDAAAVLGPAFLRDPGSSPALPWDRFDAWVHCVCVVGFDLELGQAVEVIYPPHAKLSDKEKTSICYLSFPDSNSGCLGDTQFCFRIRQSASKNNPLDYLYDRDAPVYLKTDSAHYYGYVYFRQVRDKSLKRGYFQKSLVLISKLPYVSFFHFLLKLIAPEYFDKNEPYLEAVCHDIDHWPEPIPGRILTLPTTGVIIKVRIPTGQDKPGATQIIQSTDEVESQVSFALPTIHEVDLFRCFCPIFFHIQMLWELVLLGEPLIVMAPSPAESSETVLALVCCVSPLKYCSDFRPYFTIHDSEFKEYTTRTQAPPSVILGVTNPFFAKTLQHWPHIIRIGDMKPAGDIPKQVKVKKLKNLKTLDSKPGVYTSYKTYLGKDEEIIKQVQKGIQQKRPSEAQCVILRRYFLELTQSFIIPLERYVASLMPLQKSISPWKSPPQLKPFSEDEFMKTLEKAGPQLTSRLKGDWIGLYRQFLKSPNFDGWFRSRWKEMTQKLEALHLEALCEADLLIWIQKHTEVEVVDLVLKLKEKLFQAKQQCLPVKQDTLQKLQMHIEAIILSLPEDLQSILLKNGTT
SIO_010081: dennd6a
subclass of: SO_0000673
so part of: dennd6a
location: complement(join(2990040..2990171,2990608..2990682,2992129..2992231,2993338..2993447,2993549..2993602,2994203..2994292,2995925..2995989,2999337..2999402,3001968..3002062,3002210..3002305,3003396..3003518,3004185..3004240,3006694..3006756,3009508..3009587,3012907..3013012,3016241..3016321,3017345..3017448,3023367..3023409,3023495..3023533,3026424..3026618))
location: region:2990040-3026618:-1
so has part: feature:3026424-3026618:-1:exon
so has part: feature:3023495-3023533:-1:exon
so has part: feature:3023367-3023409:-1:exon
so has part: feature:3017345-3017448:-1:exon
so has part: feature:3016241-3016321:-1:exon
so has part: feature:3012907-3013012:-1:exon
so has part: feature:3009508-3009587:-1:exon
so has part: feature:3006694-3006756:-1:exon
so has part: feature:3004185-3004240:-1:exon
so has part: feature:3003396-3003518:-1:exon
so has part: feature:3002210-3002305:-1:exon
so has part: feature:3001968-3002062:-1:exon
so has part: feature:2999337-2999402:-1:exon
so has part: feature:2995925-2995989:-1:exon
so has part: feature:2994203-2994292:-1:exon
so has part: feature:2993549-2993602:-1:exon
so has part: feature:2993338-2993447:-1:exon
so has part: feature:2992129-2992231:-1:exon
so has part: feature:2990608-2990682:-1:exon
so has part: feature:2990040-2990171:-1:exon

XP_032892483.1
type: Protein
SIO_000068: ncbiprotein

position:2990040:-1
position: 2990040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3026618:-1
position: 3026618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3026424-3026618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3023495-3023533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3023367-3023409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3017345-3017448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3016241-3016321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3012907-3013012:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3009508-3009587:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3006694-3006756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3004185-3004240:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3003396-3003518:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3002210-3002305:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3001968-3002062:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2999337-2999402:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2995925-2995989:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2994203-2994292:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2993549-2993602:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2993338-2993447:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2992129-2992231:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2990608-2990682:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2990040-2990171:-1:exon

LOC116983051
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116983051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3027078..3151705
location: region:3027078-3151705:1
so has part: feature:3027078-3151705:1:exon
subclass of: SO_0000010

116983051
type: Gene
SIO_000068: ncbigene

position:3027078:1
position: 3027078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3151705:1
position: 3151705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3027078-3151705:1:exon

LOC116983051
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116983051
product: sarcolemma associated protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033036593.1
SIO_010081: LOC116983051
subclass of: SO_0000673
so part of: LOC116983051
location: join(3027078..3028176,3059907..3060054,3060980..3061052,3063749..3063785,3071761..3071823,3073177..3073272,3073721..3073792,3076626..3076766,3077947..3078084,3080287..3080455,3081168..3081218,3089223..3089273,3092525..3092590,3099524..3099583,3110902..3110982,3111835..3111894,3119490..3119552,3127568..3127693,3130016..3130090,3134019..3134339,3140802..3140919,3143194..3143365,3144388..3144525,3145883..3145885,3150274..3151705)
location: region:3027078-3151705:1
so has part: feature:3027078-3028176:1:exon
so has part: feature:3059907-3060054:1:exon
so has part: feature:3060980-3061052:1:exon
so has part: feature:3063749-3063785:1:exon
so has part: feature:3071761-3071823:1:exon
so has part: feature:3073177-3073272:1:exon
so has part: feature:3073721-3073792:1:exon
so has part: feature:3076626-3076766:1:exon
so has part: feature:3077947-3078084:1:exon
so has part: feature:3080287-3080455:1:exon
so has part: feature:3081168-3081218:1:exon
so has part: feature:3089223-3089273:1:exon
so has part: feature:3092525-3092590:1:exon
so has part: feature:3099524-3099583:1:exon
so has part: feature:3110902-3110982:1:exon
so has part: feature:3111835-3111894:1:exon
so has part: feature:3119490-3119552:1:exon
so has part: feature:3127568-3127693:1:exon
so has part: feature:3130016-3130090:1:exon
so has part: feature:3134019-3134339:1:exon
so has part: feature:3140802-3140919:1:exon
so has part: feature:3143194-3143365:1:exon
so has part: feature:3144388-3144525:1:exon
so has part: feature:3145883-3145885:1:exon
so has part: feature:3150274-3151705:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3027078-3028176:1:exon

position:3028176:1
position: 3028176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3059907-3060054:1:exon

position:3059907:1
position: 3059907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3060054:1
position: 3060054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3060980-3061052:1:exon

position:3060980:1
position: 3060980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3061052:1
position: 3061052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3063749-3063785:1:exon

position:3063749:1
position: 3063749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3063785:1
position: 3063785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3071761-3071823:1:exon

position:3071761:1
position: 3071761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3071823:1
position: 3071823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3073177-3073272:1:exon

position:3073177:1
position: 3073177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3073272:1
position: 3073272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3073721-3073792:1:exon

position:3073721:1
position: 3073721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3073792:1
position: 3073792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3076626-3076766:1:exon

position:3076626:1
position: 3076626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3076766:1
position: 3076766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3077947-3078084:1:exon

position:3077947:1
position: 3077947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3078084:1
position: 3078084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3080287-3080455:1:exon

position:3080287:1
position: 3080287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3080455:1
position: 3080455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3081168-3081218:1:exon

position:3081168:1
position: 3081168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3081218:1
position: 3081218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3089223-3089273:1:exon

position:3089223:1
position: 3089223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3089273:1
position: 3089273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3092525-3092590:1:exon

position:3092525:1
position: 3092525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3092590:1
position: 3092590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3099524-3099583:1:exon

position:3099524:1
position: 3099524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3099583:1
position: 3099583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:3111835-3111894:1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:3119490-3119552:1:exon

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SIO_000300: 18
SIO_000628: feature:3127568-3127693:1:exon

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SIO_000300: 19
SIO_000628: feature:3130016-3130090:1:exon

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SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:3140802-3140919:1:exon