Amblyraja radiata isolate CabotCenter1 chromosome 17, sAmbRad1.1.pri, whole genome shotgun sequence.
type: Entry
definition: Amblyraja radiata isolate CabotCenter1 chromosome 17, sAmbRad1.1.pri, whole genome shotgun sequence.
sequence version: NC_045972.1
sequence date: 2021-04-05
sequence: sequence
division: CON
label: NC_045972.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA610638
dblink: SAMN09948523
keyword: WGS
keyword: RefSeq
source: Amblyraja radiata (thorny skate)
organism: Amblyraja radiata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Amblyraja.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021382.1.\nAssembly name: sAmbRad1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/02/21. The original whole-genome shotgun project has the\naccession JAAGWR000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 13-JAN-2020\nAssembly Method :: Canu v. 1.7; purge_haplotigs v. bitbucket\n 7.10.2018; scaff10x v. 4.1.0; Bionano\n Solve DLS v. 3.3; Salsa HiC v. 2.2; Arrow\n smrtanalysis Pacbio polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes Illumina polishing v.\n 1.3.1; purge_dups v.\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n gEVAL manual curation v. 2020-01-13; VGP\n assembly pipeline v. 1.5\nAssembly Name :: sAmbRad1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 128.24x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Updated annotation\nAnnotation Name :: Amblyraja radiata Updated Annotation\n Release 100.20210331\nAnnotation Version :: 100.20210331\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; propagated\n RefSeq model\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 50970858
topology: linear
so has quality: SO_0000987
location: 1..50970858
location: region:1-50970858:1
RO_0002162: 386614

NC_045972
type: RefSeq
SIO_000068: refseq

PRJNA610638
type: BioProject
SIO_000068: bioproject

SAMN09948523
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50970858:1
position: 50970858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-50970858:1:source
so part of: sequence
organism: Amblyraja radiata
mol type: genomic DNA
isolate: CabotCenter1
chromosome: 17
sex: male
tissue type: testis, liver
country: USA: Gulf of Main
lat lon: 43.1336 N 68.3266 W
collection date: 2017-09-18
collected by: Jeff Kneebone

386614
type: Taxonomy
SIO_000068: taxonomy

LOC116982391
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982391
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(29467..49274)
location: region:29467-49274:-1
so has part: feature:29467-49274:-1:exon
subclass of: SO_0000010

116982391
type: Gene
SIO_000068: ncbigene

position:29467:-1
position: 29467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49274:-1
position: 49274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29467-49274:-1:exon

LOC116982391
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 386614
gene: LOC116982391
product: uncharacterized LOC116982391, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004414449.1
SIO_010081: LOC116982391
so part of: LOC116982391
location: complement(join(29467..30239,34273..34419,46473..46601,47816..49274))
location: region:29467-49274:-1
so has part: feature:47816-49274:-1:exon
so has part: feature:46473-46601:-1:exon
so has part: feature:34273-34419:-1:exon
so has part: feature:29467-30239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47816-49274:-1:exon

position:47816:-1
position: 47816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:46473-46601:-1:exon

position:46473:-1
position: 46473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46601:-1
position: 46601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34273-34419:-1:exon

position:34273:-1
position: 34273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34419:-1
position: 34419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:29467-30239:-1:exon

position:30239:-1
position: 30239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116982391
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982391
product: uncharacterized LOC116982391, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033035594.1
SIO_010081: LOC116982391
subclass of: SO_0000673
so part of: LOC116982391
location: complement(join(29467..30239,34273..34419,46466..46601,47816..49272))
location: region:29467-49272:-1
so has part: feature:47816-49272:-1:exon
so has part: feature:46466-46601:-1:exon
so has part: feature:34273-34419:-1:exon
so has part: feature:29467-30239:-1:exon

position:49272:-1
position: 49272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47816-49272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46466-46601:-1:exon

position:46466:-1
position: 46466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34273-34419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:29467-30239:-1:exon

LOC116982391
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982391
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116982391
translation: MMRTCSVKCEGNQDNAGNINSSRGPLDLVKNPHLRNSMHNEELDAVNSEWAPGCMSTPNIAVKYSFIENPPFDYSFQTSSSTLQDDTHVAVGDCSDKQAPKGDSSSGSNKNKPKSSSGKAINAPLPDNQLRESKAVIAGSSKPFSNLPITRRKMTTLGATSVEYKCSGEKKSMPLSTGNSRPSCSSMGRGGRPPLQPPNLSKKSLPKPRLVPGRPSSVVGTGQRSPSNQLPSSKTTVNTKIPVKTETKVISKIPGIKKQSPHATSVEPTQEPNKSESELAQLFVVGTAGPSSTRKNVHTLHALASNNVITGIKRPGSTMEQKRQCPSPKRPKAVAQFHRKIKELEEKVAVRARKCCTSSESVPTLALKIPMFNTMSDANTALLK
SIO_010081: LOC116982391
subclass of: SO_0000673
so part of: LOC116982391
location: complement(join(30088..30239,34273..34419,46466..46601,47816..48535))
location: region:30088-48535:-1
so has part: feature:47816-48535:-1:exon
so has part: feature:46466-46601:-1:exon
so has part: feature:34273-34419:-1:exon
so has part: feature:30088-30239:-1:exon

XP_032891485.1
type: Protein
SIO_000068: ncbiprotein

position:30088:-1
position: 30088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48535:-1
position: 48535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47816-48535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46466-46601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34273-34419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30088-30239:-1:exon

LOC116982928
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 271754..274473
location: region:271754-274473:1
so has part: feature:271754-274473:1:exon
subclass of: SO_0000011

116982928
type: Gene
SIO_000068: ncbigene

position:271754:1
position: 271754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274473:1
position: 274473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271754-274473:1:exon

LOC116982928
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116982928
product: uncharacterized LOC116982928
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004414556.1
SIO_010081: LOC116982928
subclass of: SO_0000673
so part of: LOC116982928
location: join(271754..271802,274405..274473)
location: region:271754-274473:1
so has part: feature:271754-271802:1:exon
so has part: feature:274405-274473:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271754-271802:1:exon

position:271802:1
position: 271802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274405-274473:1:exon

position:274405:1
position: 274405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116982929
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 275648..281912
location: region:275648-281912:1
so has part: feature:275648-281912:1:exon
subclass of: SO_0000011

116982929
type: Gene
SIO_000068: ncbigene

position:275648:1
position: 275648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281912:1
position: 281912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275648-281912:1:exon

LOC116982929
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116982929
product: uncharacterized LOC116982929
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004414557.1
SIO_010081: LOC116982929
subclass of: SO_0000673
so part of: LOC116982929
location: join(275648..275724,281014..281057,281851..281912)
location: region:275648-281912:1
so has part: feature:275648-275724:1:exon
so has part: feature:281014-281057:1:exon
so has part: feature:281851-281912:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275648-275724:1:exon

position:275724:1
position: 275724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:281014-281057:1:exon

position:281014:1
position: 281014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281057:1
position: 281057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:281851-281912:1:exon

position:281851:1
position: 281851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116982930
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982930
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(682316..684665)
location: region:682316-684665:-1
so has part: feature:682316-684665:-1:exon
subclass of: SO_0000011

116982930
type: Gene
SIO_000068: ncbigene

position:682316:-1
position: 682316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684665:-1
position: 684665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682316-684665:-1:exon

LOC116982930
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116982930
product: uncharacterized LOC116982930
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004414558.1
SIO_010081: LOC116982930
subclass of: SO_0000673
so part of: LOC116982930
location: complement(join(682316..682523,682665..682765,684630..684665))
location: region:682316-684665:-1
so has part: feature:684630-684665:-1:exon
so has part: feature:682665-682765:-1:exon
so has part: feature:682316-682523:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684630-684665:-1:exon

position:684630:-1
position: 684630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:682665-682765:-1:exon

position:682665:-1
position: 682665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682765:-1
position: 682765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:682316-682523:-1:exon

position:682523:-1
position: 682523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116982931
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(714155..720740)
location: region:714155-720740:-1
so has part: feature:714155-720740:-1:exon
subclass of: SO_0000011

116982931
type: Gene
SIO_000068: ncbigene

position:714155:-1
position: 714155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720740:-1
position: 720740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714155-720740:-1:exon

LOC116982931
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116982931
product: uncharacterized LOC116982931
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004414559.1
SIO_010081: LOC116982931
subclass of: SO_0000673
so part of: LOC116982931
location: complement(join(714155..714301,714505..714529,720730..720740))
location: region:714155-720740:-1
so has part: feature:720730-720740:-1:exon
so has part: feature:714505-714529:-1:exon
so has part: feature:714155-714301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:720730-720740:-1:exon

position:720730:-1
position: 720730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:714505-714529:-1:exon

position:714505:-1
position: 714505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714529:-1
position: 714529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:714155-714301:-1:exon

position:714301:-1
position: 714301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116982393
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982393
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(723194..739178)
location: region:723194-739178:-1
so has part: feature:723194-739178:-1:exon
subclass of: SO_0000011

116982393
type: Gene
SIO_000068: ncbigene

position:723194:-1
position: 723194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739178:-1
position: 739178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723194-739178:-1:exon

LOC116982393
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116982393
product: uncharacterized LOC116982393
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004414450.1
SIO_010081: LOC116982393
subclass of: SO_0000673
so part of: LOC116982393
location: complement(join(723194..723204,724787..724790,738435..739178))
location: region:723194-739178:-1
so has part: feature:738435-739178:-1:exon
so has part: feature:724787-724790:-1:exon
so has part: feature:723194-723204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:738435-739178:-1:exon

position:738435:-1
position: 738435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:724787-724790:-1:exon

position:724787:-1
position: 724787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724790:-1
position: 724790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:723194-723204:-1:exon

position:723204:-1
position: 723204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

faap24
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: faap24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(740360..840701)
location: region:740360-840701:-1
so has part: feature:740360-840701:-1:exon
subclass of: SO_0000010

116982964
type: Gene
SIO_000068: ncbigene

position:740360:-1
position: 740360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840701:-1
position: 840701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740360-840701:-1:exon

faap24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: faap24
product: FA core complex associated protein 24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033036496.1
SIO_010081: faap24
subclass of: SO_0000673
so part of: faap24
location: complement(join(740360..740742,741046..741146,742122..742297,743755..743877,751392..751581,754212..754366,755476..755609,756186..756392,828045..828214,828562..828701,829101..829260,840573..840701))
location: region:740360-840701:-1
so has part: feature:840573-840701:-1:exon
so has part: feature:829101-829260:-1:exon
so has part: feature:828562-828701:-1:exon
so has part: feature:828045-828214:-1:exon
so has part: feature:756186-756392:-1:exon
so has part: feature:755476-755609:-1:exon
so has part: feature:754212-754366:-1:exon
so has part: feature:751392-751581:-1:exon
so has part: feature:743755-743877:-1:exon
so has part: feature:742122-742297:-1:exon
so has part: feature:741046-741146:-1:exon
so has part: feature:740360-740742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:840573-840701:-1:exon

position:840573:-1
position: 840573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:829101-829260:-1:exon

position:829101:-1
position: 829101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829260:-1
position: 829260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:828562-828701:-1:exon

position:828562:-1
position: 828562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828701:-1
position: 828701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:828045-828214:-1:exon

position:828045:-1
position: 828045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828214:-1
position: 828214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:756186-756392:-1:exon

position:756186:-1
position: 756186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756392:-1
position: 756392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:755476-755609:-1:exon

position:755476:-1
position: 755476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755609:-1
position: 755609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:754212-754366:-1:exon

position:754212:-1
position: 754212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754366:-1
position: 754366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:751392-751581:-1:exon

position:751392:-1
position: 751392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751581:-1
position: 751581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:743755-743877:-1:exon

position:743755:-1
position: 743755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743877:-1
position: 743877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:742122-742297:-1:exon

position:742122:-1
position: 742122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742297:-1
position: 742297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:741046-741146:-1:exon

position:741046:-1
position: 741046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741146:-1
position: 741146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:740360-740742:-1:exon

position:740742:-1
position: 740742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

faap24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: faap24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia core complex-associated protein 24
translation: MHPVWEVCAGVGSSRTEMDTGLDASVCSPPVRAGASAVPRGHVIASEKWRGSQLTVGCQGRVTVLYEDDLGLVDFHLSQRLCVIYVSESDLVAGNNYRRKLVRFRKASTLNGIVMVEKTPLSEQYFAGVQRFVVLDLGLTLLPVASPTEASQLLAQLVSEPDPAPSPAVPPPPQCPLPSCPTDAALLAQSDVQDKDAAVTMNMFGTLTRDKFEWHPEKLLCKRFNVPDPYPGSTNVGLLKVKRDKYSVFNFLTVPTVAAPSGTVQPSGAQRAGKSSTGVEGKRRSRWDVSAENMEEDGAGPAIPASAPGDSTTPHGGEEPPACLPHDKADTEEEDSRPAMDLFKAVFASSSEERSSSSSSEDEDANQTEAPAEAEEAAQPSHQAAPTRTLPGLVQQLEGGEGSSGTQPRPRSPQTPVGAEEFGPRLPPALVHGAGSVTVETQSEERERHSGGAANREERRREKHSSGSQREEREQKKHKDRRKGKKQKKESKKKHKKHKVRRRTRGGSVGKEEPQALPVLDLQQRRMKNVPLMFH
SIO_010081: faap24
subclass of: SO_0000673
so part of: faap24
location: complement(join(740709..740742,741046..741146,742122..742297,743755..743877,751392..751581,754212..754366,755476..755609,756186..756392,828045..828214,828562..828701,829101..829260,840573..840590))
location: region:740709-840590:-1
so has part: feature:840573-840590:-1:exon
so has part: feature:829101-829260:-1:exon
so has part: feature:828562-828701:-1:exon
so has part: feature:828045-828214:-1:exon
so has part: feature:756186-756392:-1:exon
so has part: feature:755476-755609:-1:exon
so has part: feature:754212-754366:-1:exon
so has part: feature:751392-751581:-1:exon
so has part: feature:743755-743877:-1:exon
so has part: feature:742122-742297:-1:exon
so has part: feature:741046-741146:-1:exon
so has part: feature:740709-740742:-1:exon

XP_032892387.1
type: Protein
SIO_000068: ncbiprotein

position:740709:-1
position: 740709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840590:-1
position: 840590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840573-840590:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829101-829260:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828562-828701:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828045-828214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:756186-756392:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755476-755609:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:754212-754366:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:751392-751581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:743755-743877:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:742122-742297:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:741046-741146:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:740709-740742:-1:exon

tinf2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tinf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 840824..857518
location: region:840824-857518:1
so has part: feature:840824-857518:1:exon
subclass of: SO_0000010

116982394
type: Gene
SIO_000068: ncbigene

position:840824:1
position: 840824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857518:1
position: 857518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840824-857518:1:exon

tinf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tinf2
product: TERF1 interacting nuclear factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033035595.1
SIO_010081: tinf2
subclass of: SO_0000673
so part of: tinf2
location: join(840824..840878,842052..842260,843086..843184,843794..843895,845970..846080,850007..850130,850326..851086,856773..857518)
location: region:840824-857518:1
so has part: feature:840824-840878:1:exon
so has part: feature:842052-842260:1:exon
so has part: feature:843086-843184:1:exon
so has part: feature:843794-843895:1:exon
so has part: feature:845970-846080:1:exon
so has part: feature:850007-850130:1:exon
so has part: feature:850326-851086:1:exon
so has part: feature:856773-857518:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:840824-840878:1:exon

position:840878:1
position: 840878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:842052-842260:1:exon

position:842052:1
position: 842052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842260:1
position: 842260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:843086-843184:1:exon

position:843086:1
position: 843086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843184:1
position: 843184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:843794-843895:1:exon

position:843794:1
position: 843794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843895:1
position: 843895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:845970-846080:1:exon

position:845970:1
position: 845970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846080:1
position: 846080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:850007-850130:1:exon

position:850007:1
position: 850007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850130:1
position: 850130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:850326-851086:1:exon

position:850326:1
position: 850326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851086:1
position: 851086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:856773-857518:1:exon

position:856773:1
position: 856773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tinf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tinf2
product: TERF1 interacting nuclear factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033035596.1
SIO_010081: tinf2
subclass of: SO_0000673
so part of: tinf2
location: join(840824..840878,842052..842260,843086..843184,843794..843895,845970..846080,850007..850130,850326..851727)
location: region:840824-851727:1
so has part: feature:840824-840878:1:exon
so has part: feature:842052-842260:1:exon
so has part: feature:843086-843184:1:exon
so has part: feature:843794-843895:1:exon
so has part: feature:845970-846080:1:exon
so has part: feature:850007-850130:1:exon
so has part: feature:850326-851727:1:exon

position:851727:1
position: 851727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840824-840878:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842052-842260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:843086-843184:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:843794-843895:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845970-846080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850007-850130:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850326-851727:1:exon

tinf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tinf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TERF1-interacting nuclear factor 2 isoform X1
translation: MGCLQGSDGPMAEEGDLPLRVTSAALRSVVSGRHADHYGRVVDFVDVVWQQASSLITYQHYLKLTLAFKAKLVMEMFVRQCSLLDILQTLDKYFPPQSSADPRASRTEVVKEQQCRLQFRRLVLRLVRDGAYRHHFLQGDVEQEFGALFMAAAQALLWEFLERIENILPPLRIEQTRAGSMDTGSISPDKQPLADCSRTLPDRLLHPPQQRQQHRSGNNGSASETDPERGVAPPGSRCLASSMGSGERRLARSSPGGGGGEARPRSPRSPVFSSFHFDQWSDEEPGRCPPLPRSPPDPLQSQRAESLPAGAATVCDQRGRSGAGRAGTSRGPGTAGRGSRSLGRLTHLGLDLQRLSSAPVPREVGEQLARCPQFQPTVLLVRLSDGQRPQGDTAPAGRDQQHRPTAVRGGPVYMGMESEEGSLLWGESPLSDPSDNDYYPFCSQDVAQVHWLWRNSLGQFTTRYRHVDGNPD
SIO_010081: tinf2
subclass of: SO_0000673
so part of: tinf2
location: join(840875..840878,842052..842260,843086..843184,843794..843895,845970..846080,850007..850130,850326..851086,856773..856781)
location: region:840875-856781:1
so has part: feature:840875-840878:1:exon
so has part: feature:842052-842260:1:exon
so has part: feature:843086-843184:1:exon
so has part: feature:843794-843895:1:exon
so has part: feature:845970-846080:1:exon
so has part: feature:850007-850130:1:exon
so has part: feature:850326-851086:1:exon
so has part: feature:856773-856781:1:exon

XP_032891486.1
type: Protein
SIO_000068: ncbiprotein

position:840875:1
position: 840875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856781:1
position: 856781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840875-840878:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842052-842260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:843086-843184:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:843794-843895:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845970-846080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850007-850130:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850326-851086:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:856773-856781:1:exon

tinf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tinf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TERF1-interacting nuclear factor 2 isoform X2
translation: MGCLQGSDGPMAEEGDLPLRVTSAALRSVVSGRHADHYGRVVDFVDVVWQQASSLITYQHYLKLTLAFKAKLVMEMFVRQCSLLDILQTLDKYFPPQSSADPRASRTEVVKEQQCRLQFRRLVLRLVRDGAYRHHFLQGDVEQEFGALFMAAAQALLWEFLERIENILPPLRIEQTRAGSMDTGSISPDKQPLADCSRTLPDRLLHPPQQRQQHRSGNNGSASETDPERGVAPPGSRCLASSMGSGERRLARSSPGGGGGEARPRSPRSPVFSSFHFDQWSDEEPGRCPPLPRSPPDPLQSQRAESLPAGAATVCDQRGRSGAGRAGTSRGPGTAGRGSRSLGRLTHLGLDLQRLSSAPVPREVGEQLARCPQFQPTVLLVRLSDGQRPQGDTAPAGRDQQHRPTAVRGGPVYMGMESEEGSLLWGESPLSDPSDNDYYPFCSQDVAQVHWLWRNSLGQFTTRYRHVDGNPD
SIO_010081: tinf2
subclass of: SO_0000673
so part of: tinf2
location: join(840875..840878,842052..842260,843086..843184,843794..843895,845970..846080,850007..850130,850326..851095)
location: region:840875-851095:1
so has part: feature:840875-840878:1:exon
so has part: feature:842052-842260:1:exon
so has part: feature:843086-843184:1:exon
so has part: feature:843794-843895:1:exon
so has part: feature:845970-846080:1:exon
so has part: feature:850007-850130:1:exon
so has part: feature:850326-851095:1:exon

XP_032891487.1
type: Protein
SIO_000068: ncbiprotein

position:851095:1
position: 851095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840875-840878:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842052-842260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:843086-843184:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:843794-843895:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845970-846080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850007-850130:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850326-851095:1:exon

kiaa0513
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: kiaa0513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(860097..919490)
location: region:860097-919490:-1
so has part: feature:860097-919490:-1:exon
subclass of: SO_0000010

116982395
type: Gene
SIO_000068: ncbigene

position:860097:-1
position: 860097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919490:-1
position: 919490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:860097-919490:-1:exon

kiaa0513
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: kiaa0513
product: KIAA0513 ortholog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033035597.1
SIO_010081: kiaa0513
subclass of: SO_0000673
so part of: kiaa0513
location: complement(join(860097..861957,863828..863922,864111..864191,865000..865077,866728..866803,869475..869515,870403..870574,871459..871529,872426..872499,874146..874245,876512..876966,919428..919490))
location: region:860097-919490:-1
so has part: feature:919428-919490:-1:exon
so has part: feature:876512-876966:-1:exon
so has part: feature:874146-874245:-1:exon
so has part: feature:872426-872499:-1:exon
so has part: feature:871459-871529:-1:exon
so has part: feature:870403-870574:-1:exon
so has part: feature:869475-869515:-1:exon
so has part: feature:866728-866803:-1:exon
so has part: feature:865000-865077:-1:exon
so has part: feature:864111-864191:-1:exon
so has part: feature:863828-863922:-1:exon
so has part: feature:860097-861957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:919428-919490:-1:exon

position:919428:-1
position: 919428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:876512-876966:-1:exon

position:876512:-1
position: 876512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876966:-1
position: 876966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:874146-874245:-1:exon

position:874146:-1
position: 874146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874245:-1
position: 874245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:872426-872499:-1:exon

position:872426:-1
position: 872426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872499:-1
position: 872499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:871459-871529:-1:exon

position:871459:-1
position: 871459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871529:-1
position: 871529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:870403-870574:-1:exon

position:870403:-1
position: 870403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870574:-1
position: 870574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:869475-869515:-1:exon

position:869475:-1
position: 869475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869515:-1
position: 869515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:866728-866803:-1:exon

position:866728:-1
position: 866728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866803:-1
position: 866803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:865000-865077:-1:exon

position:865000:-1
position: 865000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865077:-1
position: 865077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:864111-864191:-1:exon

position:864111:-1
position: 864111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864191:-1
position: 864191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:863828-863922:-1:exon

position:863828:-1
position: 863828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863922:-1
position: 863922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:860097-861957:-1:exon

position:861957:-1
position: 861957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

kiaa0513
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: kiaa0513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA0513 homolog
translation: MGTQEMSLGNLQQLSVDVVKDESVCEDQAVGNGHVPHSNGTSRTESDDTDSADSELEDSPSTTWDNSKRASSVESFSSHQSLEGVLEDEAALECREFMRRYVEKIFSGREEIGQEDKARFGQLCSEDSSQGREWFAKYVSAQRCHSKCIAEHAFYRLVQSFAVVLFECYQRDDFGPAKNLMTMCFTFYYMGKPHVGVLELRQRPAGTAERSGNGWLARRDISAQLLRNTENMKGFFGALEKKLKVKNGHMESRRQEKKEQRGGRQSAEDTRGVKIYLYTHLKQQPIWHSLRFWNAAFFDAVHCERRKRSPTTREKWCHMTPEERDDTHRFDENIAFGQLGTFTYNMLEFGLSKELCTNFLKKQSVIGNLNQEQYKLLCEHIEQKALE
SIO_010081: kiaa0513
subclass of: SO_0000673
so part of: kiaa0513
location: complement(join(861908..861957,863828..863922,864111..864191,865000..865077,866728..866803,869475..869515,870403..870574,871459..871529,872426..872499,874146..874245,876512..876837))
location: region:861908-876837:-1
so has part: feature:876512-876837:-1:exon
so has part: feature:874146-874245:-1:exon
so has part: feature:872426-872499:-1:exon
so has part: feature:871459-871529:-1:exon
so has part: feature:870403-870574:-1:exon
so has part: feature:869475-869515:-1:exon
so has part: feature:866728-866803:-1:exon
so has part: feature:865000-865077:-1:exon
so has part: feature:864111-864191:-1:exon
so has part: feature:863828-863922:-1:exon
so has part: feature:861908-861957:-1:exon

XP_032891488.1
type: Protein
SIO_000068: ncbiprotein

position:861908:-1
position: 861908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876837:-1
position: 876837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876512-876837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:874146-874245:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:872426-872499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:871459-871529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870403-870574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:869475-869515:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:866728-866803:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:865000-865077:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:864111-864191:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:863828-863922:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:861908-861957:-1:exon

wdr88
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: wdr88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1086134..1132996
location: region:1086134-1132996:1
so has part: feature:1086134-1132996:1:exon
subclass of: SO_0000010

116982396
type: Gene
SIO_000068: ncbigene

position:1086134:1
position: 1086134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132996:1
position: 1132996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1086134-1132996:1:exon

wdr88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: wdr88
product: WD repeat domain 88
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033035598.1
SIO_010081: wdr88
subclass of: SO_0000673
so part of: wdr88
location: join(1086134..1086301,1086914..1087024,1106300..1106385,1108060..1108123,1108717..1108855,1111462..1111591,1125621..1125802,1126937..1127019,1130229..1130297,1131845..1131937,1132775..1132996)
location: region:1086134-1132996:1
so has part: feature:1086134-1086301:1:exon
so has part: feature:1086914-1087024:1:exon
so has part: feature:1106300-1106385:1:exon
so has part: feature:1108060-1108123:1:exon
so has part: feature:1108717-1108855:1:exon
so has part: feature:1111462-1111591:1:exon
so has part: feature:1125621-1125802:1:exon
so has part: feature:1126937-1127019:1:exon
so has part: feature:1130229-1130297:1:exon
so has part: feature:1131845-1131937:1:exon
so has part: feature:1132775-1132996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1086134-1086301:1:exon

position:1086301:1
position: 1086301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1086914-1087024:1:exon

position:1086914:1
position: 1086914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087024:1
position: 1087024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1106300-1106385:1:exon

position:1106300:1
position: 1106300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106385:1
position: 1106385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1108060-1108123:1:exon

position:1108060:1
position: 1108060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108123:1
position: 1108123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1108717-1108855:1:exon

position:1108717:1
position: 1108717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108855:1
position: 1108855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1111462-1111591:1:exon

position:1111462:1
position: 1111462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111591:1
position: 1111591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1125621-1125802:1:exon

position:1125621:1
position: 1125621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125802:1
position: 1125802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1126937-1127019:1:exon

position:1126937:1
position: 1126937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127019:1
position: 1127019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1130229-1130297:1:exon

position:1130229:1
position: 1130229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130297:1
position: 1130297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1131845-1131937:1:exon

position:1131845:1
position: 1131845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131937:1
position: 1131937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1132775-1132996:1:exon

position:1132775:1
position: 1132775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

wdr88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: wdr88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 88
translation: MPLLCPQEEAPAPLPDNPLALEPPSLGDGLVVESERGRQRLTKIPYQVYLGHTSQVSCCNFCFDDTRFITSSFDESVILWDVATRSQVCDYRLHTAPVTECCLSPDNQRLFTSSWDKSLKAWDVETGKVLWAVVHHRPLTCCDISFDGRHVVCGSDINNAVYIRASDSGYPIASLQEQHGSTVTRCRFSPDGQRVASTSCDRTARIWDMLTRRTTITLQRHGNVVSDCCFTQQGNALCTSSWDRTLLIWDVSVGQFRSQGPLKLAGGHRGCVSSCTFSRDANLIVAGSYDHSVSIWDTAGLYTKLVLKDHNDWVTDVDISADNARVLSACKDSTVLLWNIERLDQIPAVQSQRKLGGENVVQCAECHKPFSICLEDSSLPTCCSFCRLSATGPDLPQLPDV
SIO_010081: wdr88
subclass of: SO_0000673
so part of: wdr88
location: join(1086173..1086301,1086914..1087024,1106300..1106385,1108060..1108123,1108717..1108855,1111462..1111591,1125621..1125802,1126937..1127019,1130229..1130297,1131845..1131937,1132775..1132894)
location: region:1086173-1132894:1
so has part: feature:1086173-1086301:1:exon
so has part: feature:1086914-1087024:1:exon
so has part: feature:1106300-1106385:1:exon
so has part: feature:1108060-1108123:1:exon
so has part: feature:1108717-1108855:1:exon
so has part: feature:1111462-1111591:1:exon
so has part: feature:1125621-1125802:1:exon
so has part: feature:1126937-1127019:1:exon
so has part: feature:1130229-1130297:1:exon
so has part: feature:1131845-1131937:1:exon
so has part: feature:1132775-1132894:1:exon

XP_032891489.1
type: Protein
SIO_000068: ncbiprotein

position:1086173:1
position: 1086173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132894:1
position: 1132894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1086173-1086301:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1086914-1087024:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1106300-1106385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1108060-1108123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1108717-1108855:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1111462-1111591:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1125621-1125802:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1126937-1127019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130229-1130297:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1131845-1131937:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1132775-1132894:1:exon

slc7a10
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: slc7a10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1151927..1188855)
location: region:1151927-1188855:-1
so has part: feature:1151927-1188855:-1:exon
subclass of: SO_0000010

116982965
type: Gene
SIO_000068: ncbigene

position:1151927:-1
position: 1151927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1188855:-1
position: 1188855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1151927-1188855:-1:exon

slc7a10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: slc7a10
product: solute carrier family 7 member 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033036497.1
SIO_010081: slc7a10
subclass of: SO_0000673
so part of: slc7a10
location: complement(join(1151927..1152036,1175470..1175595,1175854..1176005,1176895..1177099,1188766..1188855))
location: region:1151927-1188855:-1
so has part: feature:1188766-1188855:-1:exon
so has part: feature:1176895-1177099:-1:exon
so has part: feature:1175854-1176005:-1:exon
so has part: feature:1175470-1175595:-1:exon
so has part: feature:1151927-1152036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1188766-1188855:-1:exon

position:1188766:-1
position: 1188766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1176895-1177099:-1:exon

position:1176895:-1
position: 1176895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177099:-1
position: 1177099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1175854-1176005:-1:exon

position:1175854:-1
position: 1175854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176005:-1
position: 1176005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1175470-1175595:-1:exon

position:1175470:-1
position: 1175470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175595:-1
position: 1175595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1151927-1152036:-1:exon

position:1152036:-1
position: 1152036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

slc7a10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: slc7a10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: asc-type amino acid transporter 1
translation: MPGAPDIPERVALKKEIGLPSACAIIVGNIIGSGIFISPKGVLEQVGSVGLALLVWALAGLVTAVGALCYAELGVTIPQSGGDYAYVKEVFGGLPGFLVLWSALLVIYPTTQAVMALTFASYVLQPVFPACVPPYIASRFLAALCLSLLTWVNCSSVRWVTRVQDLFTAGKLLALGLIIVMGLVQICKVMFSSGHKSLQILESAFCHGLITEVLLFVTKMMVVF
SIO_010081: slc7a10
subclass of: SO_0000673
so part of: slc7a10
location: complement(join(1151927..1152036,1175470..1175595,1175854..1176005,1176895..1177099,1188766..1188847))
location: region:1151927-1188847:-1
so has part: feature:1188766-1188847:-1:exon
so has part: feature:1176895-1177099:-1:exon
so has part: feature:1175854-1176005:-1:exon
so has part: feature:1175470-1175595:-1:exon
so has part: feature:1151927-1152036:-1:exon

XP_032892388.1
type: Protein
SIO_000068: ncbiprotein

position:1188847:-1
position: 1188847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1188766-1188847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176895-1177099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1175854-1176005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175470-1175595:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1151927-1152036:-1:exon

galns
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: galns
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1193857..1230373)
location: region:1193857-1230373:-1
so has part: feature:1193857-1230373:-1:exon
subclass of: SO_0000010

116982397
type: Gene
SIO_000068: ncbigene

position:1193857:-1
position: 1193857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230373:-1
position: 1230373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193857-1230373:-1:exon

galns
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: galns
product: galactosamine (N-acetyl)-6-sulfatase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_033035599.1
SIO_010081: galns
subclass of: SO_0000673
so part of: galns
location: complement(join(1193857..1195034,1195674..1195791,1196187..1196308,1196722..1196824,1197857..1197993,1198325..1198428,1201439..1201578,1202400..1202527,1207830..1207896,1208696..1208839,1215502..1215604,1216143..1216217,1217934..1218057,1230259..1230373))
location: region:1193857-1230373:-1
so has part: feature:1230259-1230373:-1:exon
so has part: feature:1217934-1218057:-1:exon
so has part: feature:1216143-1216217:-1:exon
so has part: feature:1215502-1215604:-1:exon
so has part: feature:1208696-1208839:-1:exon
so has part: feature:1207830-1207896:-1:exon
so has part: feature:1202400-1202527:-1:exon
so has part: feature:1201439-1201578:-1:exon
so has part: feature:1198325-1198428:-1:exon
so has part: feature:1197857-1197993:-1:exon
so has part: feature:1196722-1196824:-1:exon
so has part: feature:1196187-1196308:-1:exon
so has part: feature:1195674-1195791:-1:exon
so has part: feature:1193857-1195034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1230259-1230373:-1:exon

position:1230259:-1
position: 1230259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1217934-1218057:-1:exon

position:1217934:-1
position: 1217934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218057:-1
position: 1218057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1216143-1216217:-1:exon

position:1216143:-1
position: 1216143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216217:-1
position: 1216217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1215502-1215604:-1:exon

position:1215502:-1
position: 1215502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215604:-1
position: 1215604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1208696-1208839:-1:exon

position:1208696:-1
position: 1208696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208839:-1
position: 1208839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1207830-1207896:-1:exon

position:1207830:-1
position: 1207830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207896:-1
position: 1207896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1202400-1202527:-1:exon

position:1202400:-1
position: 1202400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202527:-1
position: 1202527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1201439-1201578:-1:exon

position:1201439:-1
position: 1201439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201578:-1
position: 1201578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1198325-1198428:-1:exon

position:1198325:-1
position: 1198325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198428:-1
position: 1198428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1197857-1197993:-1:exon

position:1197857:-1
position: 1197857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197993:-1
position: 1197993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1196722-1196824:-1:exon

position:1196722:-1
position: 1196722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196824:-1
position: 1196824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1196187-1196308:-1:exon

position:1196187:-1
position: 1196187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196308:-1
position: 1196308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1195674-1195791:-1:exon

position:1195674:-1
position: 1195674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1195791:-1
position: 1195791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1193857-1195034:-1:exon

position:1195034:-1
position: 1195034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

galns
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: galns
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetylgalactosamine-6-sulfatase
translation: MMAAVWTLLALMAAADGGTAPNLLLLLMDDMGWGDLGVFGEPSRETPNLDRMAAEGMLFTNFYAANPLCSPSRAALLTGRLPVRNGFYTTNAHARNGYTPQEIVGGIPDSEILLPELLRKAGYSSKIIGKWHLGQRAQFHPLRHGFDEWFGAPNCHFGPYDNRDRPNIPVYNNSEMVGRYYEEFPINVKTGESNLTQIYLQEGLEFIRRQAAERRSFLLYWAVDGTHAPVYASKAYLGTSRRGLYGDAVREMDESVGTILRELQKQGIANNTLVFFTSDNGAALNSAPKQGGSNGPFLCGKETTFEGGMREPAIAWWPGHIPAGQVSEQLGTLMDLFTTSLALAGLQPPTDRQLDGIDLSPVILQNKLVDRPVFYYRGNELMAVRAGLYKAHYWTWSNSWEELARGIDFCPGQNVTGVTTHDQRDHSVQPLLFHLGRDPGEKYPISFSSHEYEDAALTFSAVVQHHRASLVPGEPQLNVCDRAVMNWSPPGCEKLGKCLNIPPSSPWKCDWPH
SIO_010081: galns
subclass of: SO_0000673
so part of: galns
location: complement(join(1194948..1195034,1195674..1195791,1196187..1196308,1196722..1196824,1197857..1197993,1198325..1198428,1201439..1201578,1202400..1202527,1207830..1207896,1208696..1208839,1215502..1215604,1216143..1216217,1217934..1218057,1230259..1230348))
location: region:1194948-1230348:-1
so has part: feature:1230259-1230348:-1:exon
so has part: feature:1217934-1218057:-1:exon
so has part: feature:1216143-1216217:-1:exon
so has part: feature:1215502-1215604:-1:exon
so has part: feature:1208696-1208839:-1:exon
so has part: feature:1207830-1207896:-1:exon
so has part: feature:1202400-1202527:-1:exon
so has part: feature:1201439-1201578:-1:exon
so has part: feature:1198325-1198428:-1:exon
so has part: feature:1197857-1197993:-1:exon
so has part: feature:1196722-1196824:-1:exon
so has part: feature:1196187-1196308:-1:exon
so has part: feature:1195674-1195791:-1:exon
so has part: feature:1194948-1195034:-1:exon

XP_032891490.1
type: Protein
SIO_000068: ncbiprotein

position:1194948:-1
position: 1194948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230348:-1
position: 1230348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230259-1230348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1217934-1218057:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1216143-1216217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215502-1215604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1208696-1208839:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207830-1207896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1202400-1202527:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1201439-1201578:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1198325-1198428:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1197857-1197993:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1196722-1196824:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1196187-1196308:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195674-1195791:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1194948-1195034:-1:exon

trappc2l
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: trappc2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1230276..1238673
location: region:1230276-1238673:1
so has part: feature:1230276-1238673:1:exon
subclass of: SO_0000010

116982398
type: Gene
SIO_000068: ncbigene

position:1230276:1
position: 1230276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238673:1
position: 1238673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230276-1238673:1:exon

trappc2l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: trappc2l
product: trafficking protein particle complex subunit 2L
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033035600.1
SIO_010081: trappc2l
subclass of: SO_0000673
so part of: trappc2l
location: join(1230276..1230450,1231678..1231850,1232192..1232279,1232607..1232686,1238277..1238673)
location: region:1230276-1238673:1
so has part: feature:1230276-1230450:1:exon
so has part: feature:1231678-1231850:1:exon
so has part: feature:1232192-1232279:1:exon
so has part: feature:1232607-1232686:1:exon
so has part: feature:1238277-1238673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1230276-1230450:1:exon

position:1230450:1
position: 1230450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1231678-1231850:1:exon

position:1231678:1
position: 1231678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231850:1
position: 1231850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1232192-1232279:1:exon

position:1232192:1
position: 1232192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1232279:1
position: 1232279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1232607-1232686:1:exon

position:1232607:1
position: 1232607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1232686:1
position: 1232686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1238277-1238673:1:exon

position:1238277:1
position: 1238277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

trappc2l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: trappc2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 2-like protein
translation: MAVCVAVIAKENYPLYIKTIPTENELKFHYTVHTSLDVVEEKISAVGKALVDQRELYLGLLYPTEDYKVYGYVTNTKVKFVIVVDSSNIALRDNEIRSMFRKLHNSYTDVMCNPFYNPGEVIESKVFDNMVSGMMIQVC
SIO_010081: trappc2l
subclass of: SO_0000673
so part of: trappc2l
location: join(1230418..1230450,1231678..1231850,1232192..1232279,1232607..1232686,1238277..1238322)
location: region:1230418-1238322:1
so has part: feature:1230418-1230450:1:exon
so has part: feature:1231678-1231850:1:exon
so has part: feature:1232192-1232279:1:exon
so has part: feature:1232607-1232686:1:exon
so has part: feature:1238277-1238322:1:exon

XP_032891491.1
type: Protein
SIO_000068: ncbiprotein

position:1230418:1
position: 1230418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238322:1
position: 1238322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230418-1230450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1231678-1231850:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1232192-1232279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232607-1232686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238277-1238322:1:exon

cbfa2t3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: cbfa2t3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1244212..1308339)
location: region:1244212-1308339:-1
so has part: feature:1244212-1308339:-1:exon
subclass of: SO_0000010

116982399
type: Gene
SIO_000068: ncbigene

position:1244212:-1
position: 1244212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1308339:-1
position: 1308339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1244212-1308339:-1:exon

cbfa2t3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cbfa2t3
product: CBFA2/RUNX1 partner transcriptional co-repressor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033035602.1
SIO_010081: cbfa2t3
subclass of: SO_0000673
so part of: cbfa2t3
location: complement(join(1244212..1247790,1262342..1262497,1267456..1267646,1272156..1272224,1274407..1274542,1282155..1282246,1282579..1282829,1287037..1287218,1288843..1288932,1296033..1296274,1301860..1302006,1307758..1308339))
location: region:1244212-1308339:-1
so has part: feature:1307758-1308339:-1:exon
so has part: feature:1301860-1302006:-1:exon
so has part: feature:1296033-1296274:-1:exon
so has part: feature:1288843-1288932:-1:exon
so has part: feature:1287037-1287218:-1:exon
so has part: feature:1282579-1282829:-1:exon
so has part: feature:1282155-1282246:-1:exon
so has part: feature:1274407-1274542:-1:exon
so has part: feature:1272156-1272224:-1:exon
so has part: feature:1267456-1267646:-1:exon
so has part: feature:1262342-1262497:-1:exon
so has part: feature:1244212-1247790:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1307758-1308339:-1:exon

position:1307758:-1
position: 1307758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1301860-1302006:-1:exon

position:1301860:-1
position: 1301860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1302006:-1
position: 1302006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1296033-1296274:-1:exon

position:1296033:-1
position: 1296033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296274:-1
position: 1296274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1288843-1288932:-1:exon

position:1288843:-1
position: 1288843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288932:-1
position: 1288932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1287037-1287218:-1:exon

position:1287037:-1
position: 1287037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287218:-1
position: 1287218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1282579-1282829:-1:exon

position:1282579:-1
position: 1282579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282829:-1
position: 1282829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1282155-1282246:-1:exon

position:1282155:-1
position: 1282155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282246:-1
position: 1282246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1274407-1274542:-1:exon

position:1274407:-1
position: 1274407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274542:-1
position: 1274542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1272156-1272224:-1:exon

position:1272156:-1
position: 1272156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272224:-1
position: 1272224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1267456-1267646:-1:exon

position:1267456:-1
position: 1267456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267646:-1
position: 1267646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1262342-1262497:-1:exon

position:1262342:-1
position: 1262342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262497:-1
position: 1262497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1244212-1247790:-1:exon

position:1247790:-1
position: 1247790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cbfa2t3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cbfa2t3
product: CBFA2/RUNX1 partner transcriptional co-repressor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033035601.1
SIO_010081: cbfa2t3
subclass of: SO_0000673
so part of: cbfa2t3
location: complement(join(1244212..1247790,1262342..1262497,1267456..1267646,1272156..1272224,1274407..1274542,1282155..1282246,1282579..1282829,1287037..1287218,1288843..1288932,1296033..1296277,1301860..1302006,1307758..1308338))
location: region:1244212-1308338:-1
so has part: feature:1307758-1308338:-1:exon
so has part: feature:1301860-1302006:-1:exon
so has part: feature:1296033-1296277:-1:exon
so has part: feature:1288843-1288932:-1:exon
so has part: feature:1287037-1287218:-1:exon
so has part: feature:1282579-1282829:-1:exon
so has part: feature:1282155-1282246:-1:exon
so has part: feature:1274407-1274542:-1:exon
so has part: feature:1272156-1272224:-1:exon
so has part: feature:1267456-1267646:-1:exon
so has part: feature:1262342-1262497:-1:exon
so has part: feature:1244212-1247790:-1:exon

position:1308338:-1
position: 1308338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1307758-1308338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1301860-1302006:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1296033-1296277:-1:exon

position:1296277:-1
position: 1296277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1288843-1288932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1287037-1287218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1282579-1282829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1282155-1282246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1274407-1274542:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1272156-1272224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1267456-1267646:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1262342-1262497:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1244212-1247790:-1:exon

cbfa2t3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cbfa2t3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CBFA2T3 isoform X2
translation: MPDSPAEVKTQSQLTPPAMPPPPPTIIQGPARNISFSPTTMMNGTNHLPTAISGAPSIPKGLSDGPATSTTASLTNQQLPPTCGARQLSKLKRFLTTLQQFANDISPEIGERVRNLVLGLVNSTRTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELFHCARLAKQTPAQYLAQHEQLLLNGNSSLPIDSSEILLGVNENGKRSTPDRTKENGLDHDPSHTEHVSKRLCALSPGQCFSPSHRLGHQSNGPQHLAPPQLQHYRLEDMAGAHHYRDSYRQPEHKELRDRNRPAATGIHGTQQEEVIDHRLTDREWAEEWKHLDNLLNCIMDMVEKTRRSLTVLRRCQEADREELNHWIRRYSDAEDMKKEIRGEMPRRPTQGYTREEIWKKAEEAVNEVKRHAMTELKKAVSEAERKAHEMITAERAKMERALREAKRQASDDAQSAINQQEDSSEAIPIHTASWSREGKADEPADISTITRATPCPLERSRTHCGLRQMVLAAPPSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHVCGLNGQGPQSMSTASSPPSDSGSHLQSDVVPSSGAECPGDTGSVVSRCASPATPNPVETASH
SIO_010081: cbfa2t3
subclass of: SO_0000673
so part of: cbfa2t3
location: complement(join(1247491..1247790,1262342..1262497,1267456..1267646,1272156..1272224,1274407..1274542,1282155..1282246,1282579..1282829,1287037..1287218,1288843..1288932,1296033..1296274,1301860..1301980))
location: region:1247491-1301980:-1
so has part: feature:1301860-1301980:-1:exon
so has part: feature:1296033-1296274:-1:exon
so has part: feature:1288843-1288932:-1:exon
so has part: feature:1287037-1287218:-1:exon
so has part: feature:1282579-1282829:-1:exon
so has part: feature:1282155-1282246:-1:exon
so has part: feature:1274407-1274542:-1:exon
so has part: feature:1272156-1272224:-1:exon
so has part: feature:1267456-1267646:-1:exon
so has part: feature:1262342-1262497:-1:exon
so has part: feature:1247491-1247790:-1:exon

XP_032891493.1
type: Protein
SIO_000068: ncbiprotein

position:1247491:-1
position: 1247491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301980:-1
position: 1301980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1301860-1301980:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1296033-1296274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288843-1288932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1287037-1287218:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1282579-1282829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1282155-1282246:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1274407-1274542:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1272156-1272224:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1267456-1267646:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1262342-1262497:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1247491-1247790:-1:exon

cbfa2t3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cbfa2t3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CBFA2T3 isoform X1
translation: MPDSPAEVKTQSQLTPPAMPPPPPTIIQGPARNISFSPTTTVMNGTNHLPTAISGAPSIPKGLSDGPATSTTASLTNQQLPPTCGARQLSKLKRFLTTLQQFANDISPEIGERVRNLVLGLVNSTRTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELFHCARLAKQTPAQYLAQHEQLLLNGNSSLPIDSSEILLGVNENGKRSTPDRTKENGLDHDPSHTEHVSKRLCALSPGQCFSPSHRLGHQSNGPQHLAPPQLQHYRLEDMAGAHHYRDSYRQPEHKELRDRNRPAATGIHGTQQEEVIDHRLTDREWAEEWKHLDNLLNCIMDMVEKTRRSLTVLRRCQEADREELNHWIRRYSDAEDMKKEIRGEMPRRPTQGYTREEIWKKAEEAVNEVKRHAMTELKKAVSEAERKAHEMITAERAKMERALREAKRQASDDAQSAINQQEDSSEAIPIHTASWSREGKADEPADISTITRATPCPLERSRTHCGLRQMVLAAPPSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHVCGLNGQGPQSMSTASSPPSDSGSHLQSDVVPSSGAECPGDTGSVVSRCASPATPNPVETASH
SIO_010081: cbfa2t3
subclass of: SO_0000673
so part of: cbfa2t3
location: complement(join(1247491..1247790,1262342..1262497,1267456..1267646,1272156..1272224,1274407..1274542,1282155..1282246,1282579..1282829,1287037..1287218,1288843..1288932,1296033..1296277,1301860..1301980))
location: region:1247491-1301980:-1
so has part: feature:1301860-1301980:-1:exon
so has part: feature:1296033-1296277:-1:exon
so has part: feature:1288843-1288932:-1:exon
so has part: feature:1287037-1287218:-1:exon
so has part: feature:1282579-1282829:-1:exon
so has part: feature:1282155-1282246:-1:exon
so has part: feature:1274407-1274542:-1:exon
so has part: feature:1272156-1272224:-1:exon
so has part: feature:1267456-1267646:-1:exon
so has part: feature:1262342-1262497:-1:exon
so has part: feature:1247491-1247790:-1:exon

XP_032891492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1301860-1301980:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1296033-1296277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288843-1288932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1287037-1287218:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1282579-1282829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1282155-1282246:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1274407-1274542:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1272156-1272224:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1267456-1267646:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1262342-1262497:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1247491-1247790:-1:exon

cdh1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: cdh1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1557475..1561329
location: region:1557475-1561329:1
so has part: feature:1557475-1561329:1:exon
subclass of: SO_0000010

116982401
type: Gene
SIO_000068: ncbigene

position:1557475:1
position: 1557475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561329:1
position: 1561329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1557475-1561329:1:exon

cdh1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cdh1
product: cadherin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_033035604.1
SIO_010081: cdh1
subclass of: SO_0000673
so part of: cdh1
location: join(1557475..1557729,1559413..1559546,1560171..1560338,1561074..1561329)
location: region:1557475-1561329:1
so has part: feature:1557475-1557729:1:exon
so has part: feature:1559413-1559546:1:exon
so has part: feature:1560171-1560338:1:exon
so has part: feature:1561074-1561329:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1557475-1557729:1:exon

position:1557729:1
position: 1557729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1559413-1559546:1:exon

position:1559413:1
position: 1559413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1559546:1
position: 1559546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1560171-1560338:1:exon

position:1560171:1
position: 1560171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1560338:1
position: 1560338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1561074-1561329:1:exon

position:1561074:1
position: 1561074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

cdh1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cdh1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-1
translation: MVILSSALVLLSLLLLLLVTERFRRRHRKGLLAASDDDVRDNILNYDEQGGGEEDQDAFNIEELRNPGDALPRTRSGSKQPIRRDTPCARGQSRYPRSPPSDPSNIEDFINQGLHAADTDPNAPPYDTALIYDLEGEGSVAESLSSISSRGSDSDQEYDYLSDWGPRFKKLADMYSAA
SIO_010081: cdh1
subclass of: SO_0000673
so part of: cdh1
location: join(1557696..1557729,1559413..1559546,1560171..1560338,1561074..1561274)
location: region:1557696-1561274:1
so has part: feature:1557696-1557729:1:exon
so has part: feature:1559413-1559546:1:exon
so has part: feature:1560171-1560338:1:exon
so has part: feature:1561074-1561274:1:exon

XP_032891495.1
type: Protein
SIO_000068: ncbiprotein

position:1557696:1
position: 1557696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561274:1
position: 1561274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1557696-1557729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1559413-1559546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1560171-1560338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1561074-1561274:1:exon

LOC116982400
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1561374..1562328
location: region:1561374-1562328:1
so has part: feature:1561374-1562328:1:exon
subclass of: SO_0000010

116982400
type: Gene
SIO_000068: ncbigene

position:1561374:1
position: 1561374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1562328:1
position: 1562328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1561374-1562328:1:exon

LOC116982400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982400
product: early nodulin-75-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033035603.1
SIO_010081: LOC116982400
subclass of: SO_0000673
so part of: LOC116982400
location: join(1561374..1561621,1561766..1561780,1561826..1562064,1562124..1562328)
location: region:1561374-1562328:1
so has part: feature:1561374-1561621:1:exon
so has part: feature:1561766-1561780:1:exon
so has part: feature:1561826-1562064:1:exon
so has part: feature:1562124-1562328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1561374-1561621:1:exon

position:1561621:1
position: 1561621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1561766-1561780:1:exon

position:1561766:1
position: 1561766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561780:1
position: 1561780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1561826-1562064:1:exon

position:1561826:1
position: 1561826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1562064:1
position: 1562064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1562124-1562328:1:exon

position:1562124:1
position: 1562124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116982400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: early nodulin-75-like
translation: MLPKHTEPRHTDPRHMLPKHTEPRHTDPRHMLPKHTDPRHMLPKHTEPRHMLPKHTEPRHTLPRHTESRHTDPRHTDPRHTEPRHTEPRHTLPKHTEPRHTEPRHTLPRHTEPRHTEPRHTLPRHTLPRHTEPRHTEPRHTEPRHTEPKHTLPRHTDHGHPEPRHMDPFSICPV
SIO_010081: LOC116982400
subclass of: SO_0000673
so part of: LOC116982400
location: join(1561397..1561621,1561766..1561780,1561826..1562064,1562124..1562169)
location: region:1561397-1562169:1
so has part: feature:1561397-1561621:1:exon
so has part: feature:1561766-1561780:1:exon
so has part: feature:1561826-1562064:1:exon
so has part: feature:1562124-1562169:1:exon

XP_032891494.1
type: Protein
SIO_000068: ncbiprotein

position:1561397:1
position: 1561397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1562169:1
position: 1562169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1561397-1561621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1561766-1561780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1561826-1562064:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1562124-1562169:1:exon

fbxo31
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: fbxo31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1577768..1593395
location: region:1577768-1593395:1
so has part: feature:1577768-1593395:1:exon
subclass of: SO_0000010

116982403
type: Gene
SIO_000068: ncbigene

position:1577768:1
position: 1577768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1593395:1
position: 1593395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1577768-1593395:1:exon

fbxo31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fbxo31
product: F-box protein 31, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033035606.1
SIO_010081: fbxo31
subclass of: SO_0000673
so part of: fbxo31
location: join(1577768..1578093,1581085..1581156,1584348..1584424,1584626..1584793,1585667..1585741,1586226..1586335,1588831..1588984,1590540..1590919,1592470..1593395)
location: region:1577768-1593395:1
so has part: feature:1577768-1578093:1:exon
so has part: feature:1581085-1581156:1:exon
so has part: feature:1584348-1584424:1:exon
so has part: feature:1584626-1584793:1:exon
so has part: feature:1585667-1585741:1:exon
so has part: feature:1586226-1586335:1:exon
so has part: feature:1588831-1588984:1:exon
so has part: feature:1590540-1590919:1:exon
so has part: feature:1592470-1593395:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1577768-1578093:1:exon

position:1578093:1
position: 1578093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1581085-1581156:1:exon

position:1581085:1
position: 1581085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581156:1
position: 1581156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1584348-1584424:1:exon

position:1584348:1
position: 1584348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584424:1
position: 1584424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1584626-1584793:1:exon

position:1584626:1
position: 1584626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584793:1
position: 1584793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1585667-1585741:1:exon

position:1585667:1
position: 1585667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585741:1
position: 1585741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1586226-1586335:1:exon

position:1586226:1
position: 1586226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586335:1
position: 1586335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1588831-1588984:1:exon

position:1588831:1
position: 1588831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588984:1
position: 1588984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1590540-1590919:1:exon

position:1590540:1
position: 1590540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1590919:1
position: 1590919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1592470-1593395:1:exon

position:1592470:1
position: 1592470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fbxo31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fbxo31
product: F-box protein 31, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033035605.1
SIO_010081: fbxo31
subclass of: SO_0000673
so part of: fbxo31
location: join(1577773..1578093,1581085..1581156,1582005..1582091,1584348..1584424,1584626..1584793,1585667..1585741,1586226..1586335,1588831..1588984,1590540..1590919,1592470..1593395)
location: region:1577773-1593395:1
so has part: feature:1577773-1578093:1:exon
so has part: feature:1581085-1581156:1:exon
so has part: feature:1582005-1582091:1:exon
so has part: feature:1584348-1584424:1:exon
so has part: feature:1584626-1584793:1:exon
so has part: feature:1585667-1585741:1:exon
so has part: feature:1586226-1586335:1:exon
so has part: feature:1588831-1588984:1:exon
so has part: feature:1590540-1590919:1:exon
so has part: feature:1592470-1593395:1:exon

position:1577773:1
position: 1577773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1577773-1578093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1581085-1581156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1582005-1582091:1:exon

position:1582005:1
position: 1582005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582091:1
position: 1582091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1584348-1584424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1584626-1584793:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1585667-1585741:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1586226-1586335:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1588831-1588984:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1590540-1590919:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1592470-1593395:1:exon

fbxo31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fbxo31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 31 isoform X1
translation: MERRAAAGGPGLGPSPNHDPGPASTSAPGRYPAPGAGPPRNVLDLPPELLVEIFCLLPGMSLPGLAASCTKFHQILATDTIWRRRCRAEYGVSENLRRLETMGIACRDLYVKRVNPRFRSRRFVKLFPDTAQVDYRDVYTRLLHPYRNILGLWQPDIGPYGGLLNVVVDGLFIIGWMYLPPHDPRVNDSMRCKPLFRIHLWEKNKAEVECMYGHKGSHKGDIQIVKKDEFSTKCNQTDFHRMSGGRQEEFRTWLAEEWGRTLEDIFHEHMQELILMKFIYTSQYDNCLTYRRIYLPPSSPEDLIPPGLFKGTYGSHGLEIVMLSFHGTHVKVTKITGDPNVPAGQLTLHIDMTRRVHLPDIEHLHNFDKLSRIVLEIHQQVQCDQQNQEHCQASTQHCLDSSQPACNGVQERQEQGVTAAGVDMQMDAEGAVAGEPGTAGLPFVLPVGVMARNEVYPRTCRACFYGTGLIAGHGFTSPERTPGLFILFNEQCFGFIWLDLKSFSLYSRIEDSLKNAQAPFREAFELMLKNMQSWTS
SIO_010081: fbxo31
subclass of: SO_0000673
so part of: fbxo31
location: join(1577829..1578093,1581085..1581156,1582005..1582091,1584348..1584424,1584626..1584793,1585667..1585741,1586226..1586335,1588831..1588984,1590540..1590919,1592470..1592692)
location: region:1577829-1592692:1
so has part: feature:1577829-1578093:1:exon
so has part: feature:1581085-1581156:1:exon
so has part: feature:1582005-1582091:1:exon
so has part: feature:1584348-1584424:1:exon
so has part: feature:1584626-1584793:1:exon
so has part: feature:1585667-1585741:1:exon
so has part: feature:1586226-1586335:1:exon
so has part: feature:1588831-1588984:1:exon
so has part: feature:1590540-1590919:1:exon
so has part: feature:1592470-1592692:1:exon

XP_032891496.1
type: Protein
SIO_000068: ncbiprotein

position:1577829:1
position: 1577829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1592692:1
position: 1592692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1577829-1578093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1581085-1581156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1582005-1582091:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1584348-1584424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1584626-1584793:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1585667-1585741:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1586226-1586335:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1588831-1588984:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1590540-1590919:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1592470-1592692:1:exon

fbxo31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fbxo31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 31 isoform X2
translation: MERRAAAGGPGLGPSPNHDPGPASTSAPGRYPAPGAGPPRNVLDLPPELLVEIFCLLPGMSLPGLAASCTKFHQILATDTIWRRRCRAEYGVSENLRRLETMGIACRDLYVKLLHPYRNILGLWQPDIGPYGGLLNVVVDGLFIIGWMYLPPHDPRVNDSMRCKPLFRIHLWEKNKAEVECMYGHKGSHKGDIQIVKKDEFSTKCNQTDFHRMSGGRQEEFRTWLAEEWGRTLEDIFHEHMQELILMKFIYTSQYDNCLTYRRIYLPPSSPEDLIPPGLFKGTYGSHGLEIVMLSFHGTHVKVTKITGDPNVPAGQLTLHIDMTRRVHLPDIEHLHNFDKLSRIVLEIHQQVQCDQQNQEHCQASTQHCLDSSQPACNGVQERQEQGVTAAGVDMQMDAEGAVAGEPGTAGLPFVLPVGVMARNEVYPRTCRACFYGTGLIAGHGFTSPERTPGLFILFNEQCFGFIWLDLKSFSLYSRIEDSLKNAQAPFREAFELMLKNMQSWTS
SIO_010081: fbxo31
subclass of: SO_0000673
so part of: fbxo31
location: join(1577829..1578093,1581085..1581156,1584348..1584424,1584626..1584793,1585667..1585741,1586226..1586335,1588831..1588984,1590540..1590919,1592470..1592692)
location: region:1577829-1592692:1
so has part: feature:1577829-1578093:1:exon
so has part: feature:1581085-1581156:1:exon
so has part: feature:1584348-1584424:1:exon
so has part: feature:1584626-1584793:1:exon
so has part: feature:1585667-1585741:1:exon
so has part: feature:1586226-1586335:1:exon
so has part: feature:1588831-1588984:1:exon
so has part: feature:1590540-1590919:1:exon
so has part: feature:1592470-1592692:1:exon

XP_032891497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1577829-1578093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1581085-1581156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1584348-1584424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1584626-1584793:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1585667-1585741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1586226-1586335:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1588831-1588984:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1590540-1590919:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1592470-1592692:1:exon

fbxo31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fbxo31
product: F-box protein 31, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033035607.1
SIO_010081: fbxo31
subclass of: SO_0000673
so part of: fbxo31
location: join(1581180..1581704,1584348..1584424,1584626..1584793,1585667..1585741,1586226..1586335,1588831..1588984,1590540..1590919,1592470..1593395)
location: region:1581180-1593395:1
so has part: feature:1581180-1581704:1:exon
so has part: feature:1584348-1584424:1:exon
so has part: feature:1584626-1584793:1:exon
so has part: feature:1585667-1585741:1:exon
so has part: feature:1586226-1586335:1:exon
so has part: feature:1588831-1588984:1:exon
so has part: feature:1590540-1590919:1:exon
so has part: feature:1592470-1593395:1:exon

position:1581180:1
position: 1581180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1581180-1581704:1:exon

position:1581704:1
position: 1581704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1584348-1584424:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1584626-1584793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1585667-1585741:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1586226-1586335:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1588831-1588984:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1590540-1590919:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1592470-1593395:1:exon

fbxo31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fbxo31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 31 isoform X3
translation: MDSSKSSNTEEASGAQHLVRNRSTAVLHPYRNILGLWQPDIGPYGGLLNVVVDGLFIIGWMYLPPHDPRVNDSMRCKPLFRIHLWEKNKAEVECMYGHKGSHKGDIQIVKKDEFSTKCNQTDFHRMSGGRQEEFRTWLAEEWGRTLEDIFHEHMQELILMKFIYTSQYDNCLTYRRIYLPPSSPEDLIPPGLFKGTYGSHGLEIVMLSFHGTHVKVTKITGDPNVPAGQLTLHIDMTRRVHLPDIEHLHNFDKLSRIVLEIHQQVQCDQQNQEHCQASTQHCLDSSQPACNGVQERQEQGVTAAGVDMQMDAEGAVAGEPGTAGLPFVLPVGVMARNEVYPRTCRACFYGTGLIAGHGFTSPERTPGLFILFNEQCFGFIWLDLKSFSLYSRIEDSLKNAQAPFREAFELMLKNMQSWTS
SIO_010081: fbxo31
subclass of: SO_0000673
so part of: fbxo31
location: join(1581629..1581704,1584348..1584424,1584626..1584793,1585667..1585741,1586226..1586335,1588831..1588984,1590540..1590919,1592470..1592692)
location: region:1581629-1592692:1
so has part: feature:1581629-1581704:1:exon
so has part: feature:1584348-1584424:1:exon
so has part: feature:1584626-1584793:1:exon
so has part: feature:1585667-1585741:1:exon
so has part: feature:1586226-1586335:1:exon
so has part: feature:1588831-1588984:1:exon
so has part: feature:1590540-1590919:1:exon
so has part: feature:1592470-1592692:1:exon

XP_032891498.1
type: Protein
SIO_000068: ncbiprotein

position:1581629:1
position: 1581629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1581629-1581704:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1584348-1584424:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1584626-1584793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1585667-1585741:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1586226-1586335:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1588831-1588984:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1590540-1590919:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1592470-1592692:1:exon

tango6
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tango6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1594470..1649279
location: region:1594470-1649279:1
so has part: feature:1594470-1649279:1:exon
subclass of: SO_0000010

116982404
type: Gene
SIO_000068: ncbigene

position:1594470:1
position: 1594470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1649279:1
position: 1649279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1594470-1649279:1:exon

tango6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tango6
product: transport and golgi organization 6 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033035608.1
SIO_010081: tango6
subclass of: SO_0000673
so part of: tango6
location: join(1594470..1594565,1597564..1598220,1598973..1599086,1600109..1600256,1604143..1604279,1605532..1605694,1612108..1612190,1614171..1614283,1616913..1617089,1624675..1624801,1625448..1625603,1626523..1626657,1628824..1629264,1630699..1630756,1645744..1645896,1646738..1646889,1647625..1647738,1648197..1649279)
location: region:1594470-1649279:1
so has part: feature:1594470-1594565:1:exon
so has part: feature:1597564-1598220:1:exon
so has part: feature:1598973-1599086:1:exon
so has part: feature:1600109-1600256:1:exon
so has part: feature:1604143-1604279:1:exon
so has part: feature:1605532-1605694:1:exon
so has part: feature:1612108-1612190:1:exon
so has part: feature:1614171-1614283:1:exon
so has part: feature:1616913-1617089:1:exon
so has part: feature:1624675-1624801:1:exon
so has part: feature:1625448-1625603:1:exon
so has part: feature:1626523-1626657:1:exon
so has part: feature:1628824-1629264:1:exon
so has part: feature:1630699-1630756:1:exon
so has part: feature:1645744-1645896:1:exon
so has part: feature:1646738-1646889:1:exon
so has part: feature:1647625-1647738:1:exon
so has part: feature:1648197-1649279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1594470-1594565:1:exon

position:1594565:1
position: 1594565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1597564-1598220:1:exon

position:1597564:1
position: 1597564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1598220:1
position: 1598220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1598973-1599086:1:exon

position:1598973:1
position: 1598973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1599086:1
position: 1599086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1600109-1600256:1:exon

position:1600109:1
position: 1600109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1600256:1
position: 1600256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1604143-1604279:1:exon

position:1604143:1
position: 1604143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1604279:1
position: 1604279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1605532-1605694:1:exon

position:1605532:1
position: 1605532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605694:1
position: 1605694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1612108-1612190:1:exon

position:1612108:1
position: 1612108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1612190:1
position: 1612190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1614171-1614283:1:exon

position:1614171:1
position: 1614171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1614283:1
position: 1614283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1616913-1617089:1:exon

position:1616913:1
position: 1616913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617089:1
position: 1617089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1624675-1624801:1:exon

position:1624675:1
position: 1624675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1624801:1
position: 1624801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1625448-1625603:1:exon

position:1625448:1
position: 1625448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1625603:1
position: 1625603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1626523-1626657:1:exon

position:1626523:1
position: 1626523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626657:1
position: 1626657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1628824-1629264:1:exon

position:1628824:1
position: 1628824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629264:1
position: 1629264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1630699-1630756:1:exon

position:1630699:1
position: 1630699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1630756:1
position: 1630756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1645744-1645896:1:exon

position:1645744:1
position: 1645744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1645896:1
position: 1645896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1646738-1646889:1:exon

position:1646738:1
position: 1646738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1646889:1
position: 1646889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1647625-1647738:1:exon

position:1647625:1
position: 1647625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1647738:1
position: 1647738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1648197-1649279:1:exon

position:1648197:1
position: 1648197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tango6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tango6
product: transport and golgi organization 6 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033035609.1
SIO_010081: tango6
subclass of: SO_0000673
so part of: tango6
location: join(1594470..1594527,1597568..1598220,1598973..1599086,1600109..1600256,1604143..1604279,1605532..1605694,1612108..1612190,1614171..1614283,1616913..1617089,1624675..1624801,1625448..1625603,1626523..1626657,1628824..1629264,1630699..1630756,1645744..1645896,1646738..1646889,1647625..1647738,1648197..1649279)
location: region:1594470-1649279:1
so has part: feature:1594470-1594527:1:exon
so has part: feature:1597568-1598220:1:exon
so has part: feature:1598973-1599086:1:exon
so has part: feature:1600109-1600256:1:exon
so has part: feature:1604143-1604279:1:exon
so has part: feature:1605532-1605694:1:exon
so has part: feature:1612108-1612190:1:exon
so has part: feature:1614171-1614283:1:exon
so has part: feature:1616913-1617089:1:exon
so has part: feature:1624675-1624801:1:exon
so has part: feature:1625448-1625603:1:exon
so has part: feature:1626523-1626657:1:exon
so has part: feature:1628824-1629264:1:exon
so has part: feature:1630699-1630756:1:exon
so has part: feature:1645744-1645896:1:exon
so has part: feature:1646738-1646889:1:exon
so has part: feature:1647625-1647738:1:exon
so has part: feature:1648197-1649279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1594470-1594527:1:exon

position:1594527:1
position: 1594527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1597568-1598220:1:exon

position:1597568:1
position: 1597568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1598973-1599086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1600109-1600256:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1604143-1604279:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1605532-1605694:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1612108-1612190:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1614171-1614283:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1616913-1617089:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1624675-1624801:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1625448-1625603:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1626523-1626657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1628824-1629264:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1630699-1630756:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1645744-1645896:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1646738-1646889:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1647625-1647738:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1648197-1649279:1:exon

tango6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tango6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transport and Golgi organization protein 6 homolog isoform X1
translation: MAVSLRVVTEALRELTVPAGEGTSGRGSEGSGAEVTAVSQASCEDVLLQTLSRKLAAHHEKLRQDPVRLALGKLRSSMLAQLAWPMSSDDVVWSFVAELLVLLLCLKQTMIDVLAQFTPPKPNPKSPECAPPLSPDTLSILQQKTVQSTLQFVVTLGICSHLLPGVGIPLGCRSEFAATVEKLVGDSMPASGTWRLLNVTQVLLSIAEHPSLESLVFTRHLGDLMASLCQLSYSSTKDQRKASPGHIATQKGLTEEEQRACQESLRKMLDQVYQPNVIKELLILQGGAKVVRVRGGSAQAMLKAPAWLRRVCGQFLSQALMKPHGVQAVVRGIVEGAGAGPAGGECAEAAAADWRKCDTVARILASCPQQCLCVGDYYRHVCPQVLELLHIRDALTARQFQRVATTTLLSMVREQPELATEHLLGPLLAPLVTCLRTRGMGEESGKVDVVLLGELELTRCVEDVYKVCVVGNDPVPRLMESVQMVIPAVFNLHCFTKQGVSHLRSTCLEIILWFLQKSEKQIALVMLKRLAGLLPMDILLQPLYRFTAGSEGGVRLVAKEQESDDDEALYGKVCWEQWRAECLADVLSSLQESSIAGDFFIECLKGLASFAGENDCSPAPGCTGAVPDLEQQQLITVQLVAVMCERIGHSVFSNTVQVIEFIMATLKRSCTSLVHRTEEVVEAQTLSMGMGLVAAMLGGAVQLTASDFVALRPMLPLLEQLSALHPDPVVQELASDLRITIATRGAFSSETVSKAAHTTMGKKTQRVSRSTGGGRAEEAGAGTRDGEVPSPGRPGNPECRNNSTSDFQDILQAAFDPEESTRAAALRTLTHMIQQRNPDAQSNQEKVLTVFLENLNHEDSFVYLSAIQGLSVLSDVYPARILPQLLNEYQVSSQEAEKTRSVETRMKIGEVLMRSTRALGEMASHYRDQLIHVYLMGTKDVDSCVRASSLSNLGELCTWLDFALGPVIHEVTACLSAIVKTEREAEVRRAAVHVVTLLLRGLCEKALQVLADVLLELYRLLKFAVRTDVDQLVQLHAQLALEELDCVVRSILFPEEKLEKKITVLP
SIO_010081: tango6
subclass of: SO_0000673
so part of: tango6
location: join(1594470..1594565,1597564..1598220,1598973..1599086,1600109..1600256,1604143..1604279,1605532..1605694,1612108..1612190,1614171..1614283,1616913..1617089,1624675..1624801,1625448..1625603,1626523..1626657,1628824..1629264,1630699..1630756,1645744..1645896,1646738..1646889,1647625..1647738,1648197..1648373)
location: region:1594470-1648373:1
so has part: feature:1594470-1594565:1:exon
so has part: feature:1597564-1598220:1:exon
so has part: feature:1598973-1599086:1:exon
so has part: feature:1600109-1600256:1:exon
so has part: feature:1604143-1604279:1:exon
so has part: feature:1605532-1605694:1:exon
so has part: feature:1612108-1612190:1:exon
so has part: feature:1614171-1614283:1:exon
so has part: feature:1616913-1617089:1:exon
so has part: feature:1624675-1624801:1:exon
so has part: feature:1625448-1625603:1:exon
so has part: feature:1626523-1626657:1:exon
so has part: feature:1628824-1629264:1:exon
so has part: feature:1630699-1630756:1:exon
so has part: feature:1645744-1645896:1:exon
so has part: feature:1646738-1646889:1:exon
so has part: feature:1647625-1647738:1:exon
so has part: feature:1648197-1648373:1:exon

XP_032891499.1
type: Protein
SIO_000068: ncbiprotein

position:1648373:1
position: 1648373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1594470-1594565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1597564-1598220:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1598973-1599086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1600109-1600256:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1604143-1604279:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1605532-1605694:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1612108-1612190:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1614171-1614283:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1616913-1617089:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1624675-1624801:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1625448-1625603:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1626523-1626657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1628824-1629264:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1630699-1630756:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1645744-1645896:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1646738-1646889:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1647625-1647738:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1648197-1648373:1:exon

tango6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tango6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transport and Golgi organization protein 6 homolog isoform X2
translation: MAVSLRVVTEALRELTVPAEVTAVSQASCEDVLLQTLSRKLAAHHEKLRQDPVRLALGKLRSSMLAQLAWPMSSDDVVWSFVAELLVLLLCLKQTMIDVLAQFTPPKPNPKSPECAPPLSPDTLSILQQKTVQSTLQFVVTLGICSHLLPGVGIPLGCRSEFAATVEKLVGDSMPASGTWRLLNVTQVLLSIAEHPSLESLVFTRHLGDLMASLCQLSYSSTKDQRKASPGHIATQKGLTEEEQRACQESLRKMLDQVYQPNVIKELLILQGGAKVVRVRGGSAQAMLKAPAWLRRVCGQFLSQALMKPHGVQAVVRGIVEGAGAGPAGGECAEAAAADWRKCDTVARILASCPQQCLCVGDYYRHVCPQVLELLHIRDALTARQFQRVATTTLLSMVREQPELATEHLLGPLLAPLVTCLRTRGMGEESGKVDVVLLGELELTRCVEDVYKVCVVGNDPVPRLMESVQMVIPAVFNLHCFTKQGVSHLRSTCLEIILWFLQKSEKQIALVMLKRLAGLLPMDILLQPLYRFTAGSEGGVRLVAKEQESDDDEALYGKVCWEQWRAECLADVLSSLQESSIAGDFFIECLKGLASFAGENDCSPAPGCTGAVPDLEQQQLITVQLVAVMCERIGHSVFSNTVQVIEFIMATLKRSCTSLVHRTEEVVEAQTLSMGMGLVAAMLGGAVQLTASDFVALRPMLPLLEQLSALHPDPVVQELASDLRITIATRGAFSSETVSKAAHTTMGKKTQRVSRSTGGGRAEEAGAGTRDGEVPSPGRPGNPECRNNSTSDFQDILQAAFDPEESTRAAALRTLTHMIQQRNPDAQSNQEKVLTVFLENLNHEDSFVYLSAIQGLSVLSDVYPARILPQLLNEYQVSSQEAEKTRSVETRMKIGEVLMRSTRALGEMASHYRDQLIHVYLMGTKDVDSCVRASSLSNLGELCTWLDFALGPVIHEVTACLSAIVKTEREAEVRRAAVHVVTLLLRGLCEKALQVLADVLLELYRLLKFAVRTDVDQLVQLHAQLALEELDCVVRSILFPEEKLEKKITVLP
SIO_010081: tango6
subclass of: SO_0000673
so part of: tango6
location: join(1594470..1594527,1597568..1598220,1598973..1599086,1600109..1600256,1604143..1604279,1605532..1605694,1612108..1612190,1614171..1614283,1616913..1617089,1624675..1624801,1625448..1625603,1626523..1626657,1628824..1629264,1630699..1630756,1645744..1645896,1646738..1646889,1647625..1647738,1648197..1648373)
location: region:1594470-1648373:1
so has part: feature:1594470-1594527:1:exon
so has part: feature:1597568-1598220:1:exon
so has part: feature:1598973-1599086:1:exon
so has part: feature:1600109-1600256:1:exon
so has part: feature:1604143-1604279:1:exon
so has part: feature:1605532-1605694:1:exon
so has part: feature:1612108-1612190:1:exon
so has part: feature:1614171-1614283:1:exon
so has part: feature:1616913-1617089:1:exon
so has part: feature:1624675-1624801:1:exon
so has part: feature:1625448-1625603:1:exon
so has part: feature:1626523-1626657:1:exon
so has part: feature:1628824-1629264:1:exon
so has part: feature:1630699-1630756:1:exon
so has part: feature:1645744-1645896:1:exon
so has part: feature:1646738-1646889:1:exon
so has part: feature:1647625-1647738:1:exon
so has part: feature:1648197-1648373:1:exon

XP_032891500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1594470-1594527:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1597568-1598220:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1598973-1599086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1600109-1600256:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1604143-1604279:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1605532-1605694:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1612108-1612190:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1614171-1614283:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1616913-1617089:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1624675-1624801:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1625448-1625603:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1626523-1626657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1628824-1629264:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1630699-1630756:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1645744-1645896:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1646738-1646889:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1647625-1647738:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1648197-1648373:1:exon

LOC116982405
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1650899..1695876
location: region:1650899-1695876:1
so has part: feature:1650899-1695876:1:exon
subclass of: SO_0000010

116982405
type: Gene
SIO_000068: ncbigene

position:1650899:1
position: 1650899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695876:1
position: 1695876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1650899-1695876:1:exon

LOC116982405
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982405
product: hyaluronan synthase 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033035610.1
SIO_010081: LOC116982405
subclass of: SO_0000673
so part of: LOC116982405
location: join(1650899..1651045,1656866..1657492,1664187..1664288,1665025..1666345)
location: region:1650899-1666345:1
so has part: feature:1650899-1651045:1:exon
so has part: feature:1656866-1657492:1:exon
so has part: feature:1664187-1664288:1:exon
so has part: feature:1665025-1666345:1:exon

position:1666345:1
position: 1666345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1650899-1651045:1:exon

position:1651045:1
position: 1651045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1656866-1657492:1:exon

position:1656866:1
position: 1656866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1657492:1
position: 1657492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1664187-1664288:1:exon

position:1664187:1
position: 1664187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1664288:1
position: 1664288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1665025-1666345:1:exon

position:1665025:1
position: 1665025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116982405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan synthase 3-like isoform X1
translation: MPGERLCTALRITASTLFALSVLVAITCTYIKGYQFGYTENYHLSFGLYGAFLTLHLFIQSLFAFLEHRRARKENRPLKFTKSVALCIAAYQEDPDYLRKCLASVKHIAYPNLKVVMVIDGNQEEDMYMMEIFNELMGVENSGSYIWQSNYHQEGPGETEFTQSQGKSRVEQIIRQSAFSCIMQLWGGKREVMYTAFAALEDSVDYIQVCDSDTVLDPACTAEMVRVLDADPSVGAVGGDVQILNQHDSWISFLSSVRYWMAFNVERACQSYFGCVQCISGPLGLYRNSLLRLFLHDWYSQHFLGSKCSFGDDRHLTNRVLNLGFKTKFTGRSRCLTETPSGYLRWLNQQTRWSKSYFREWLYSALCFHKHHPWMTYEAVVSGFFPFFLTGTVLQLFYRGRLWNILLFLLAVQGVGVLKAALACLLRGSAHMLFLSLYSLLYMSSLLPAKLFALLTINRPGWGTSGRRRLVLNLVGLLPVSVWFAVLAGGLAYTVYRECQQPLPDTERPFLIAGSAIYACYWLLLLALYLAIVAKPCGRKQELPDQALLQA
SIO_010081: LOC116982405
subclass of: SO_0000673
so part of: LOC116982405
location: join(1656869..1657492,1664187..1664288,1665025..1665954)
location: region:1656869-1665954:1
so has part: feature:1656869-1657492:1:exon
so has part: feature:1664187-1664288:1:exon
so has part: feature:1665025-1665954:1:exon

XP_032891501.1
type: Protein
SIO_000068: ncbiprotein

position:1656869:1
position: 1656869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1665954:1
position: 1665954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1656869-1657492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1664187-1664288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1665025-1665954:1:exon

LOC116982405
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982405
product: hyaluronan synthase 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033035611.1
SIO_010081: LOC116982405
subclass of: SO_0000673
so part of: LOC116982405
location: join(1665683..1665706,1673763..1673927,1676200..1676391,1678217..1678301,1681597..1681686,1682114..1682325,1683173..1683344,1683425..1683516,1685381..1685477,1686956..1687020,1688411..1688533,1688815..1688971,1691554..1691660,1692339..1692434,1693737..1693922,1694195..1694305,1695633..1695876)
location: region:1665683-1695876:1
so has part: feature:1665683-1665706:1:exon
so has part: feature:1673763-1673927:1:exon
so has part: feature:1676200-1676391:1:exon
so has part: feature:1678217-1678301:1:exon
so has part: feature:1681597-1681686:1:exon
so has part: feature:1682114-1682325:1:exon
so has part: feature:1683173-1683344:1:exon
so has part: feature:1683425-1683516:1:exon
so has part: feature:1685381-1685477:1:exon
so has part: feature:1686956-1687020:1:exon
so has part: feature:1688411-1688533:1:exon
so has part: feature:1688815-1688971:1:exon
so has part: feature:1691554-1691660:1:exon
so has part: feature:1692339-1692434:1:exon
so has part: feature:1693737-1693922:1:exon
so has part: feature:1694195-1694305:1:exon
so has part: feature:1695633-1695876:1:exon

position:1665683:1
position: 1665683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1665683-1665706:1:exon

position:1665706:1
position: 1665706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1673763-1673927:1:exon

position:1673763:1
position: 1673763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1673927:1
position: 1673927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1676200-1676391:1:exon

position:1676200:1
position: 1676200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1676391:1
position: 1676391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1678217-1678301:1:exon

position:1678217:1
position: 1678217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1678301:1
position: 1678301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1681597-1681686:1:exon

position:1681597:1
position: 1681597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681686:1
position: 1681686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1682114-1682325:1:exon

position:1682114:1
position: 1682114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682325:1
position: 1682325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1683173-1683344:1:exon

position:1683173:1
position: 1683173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683344:1
position: 1683344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1683425-1683516:1:exon

position:1683425:1
position: 1683425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683516:1
position: 1683516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1685381-1685477:1:exon

position:1685381:1
position: 1685381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685477:1
position: 1685477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1686956-1687020:1:exon

position:1686956:1
position: 1686956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1687020:1
position: 1687020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1688411-1688533:1:exon

position:1688411:1
position: 1688411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1688533:1
position: 1688533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1688815-1688971:1:exon

position:1688815:1
position: 1688815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1688971:1
position: 1688971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1691554-1691660:1:exon

position:1691554:1
position: 1691554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1691660:1
position: 1691660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1692339-1692434:1:exon

position:1692339:1
position: 1692339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692434:1
position: 1692434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1693737-1693922:1:exon

position:1693737:1
position: 1693737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693922:1
position: 1693922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1694195-1694305:1:exon

position:1694195:1
position: 1694195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1694305:1
position: 1694305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1695633-1695876:1:exon

position:1695633:1
position: 1695633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

chtf8
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: chtf8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1669251..1673750)
location: region:1669251-1673750:-1
so has part: feature:1669251-1673750:-1:exon
subclass of: SO_0000010

116982406
type: Gene
SIO_000068: ncbigene

position:1669251:-1
position: 1669251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1673750:-1
position: 1673750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1669251-1673750:-1:exon

chtf8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: chtf8
product: chromosome transmission fidelity factor 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033035612.1
SIO_010081: chtf8
subclass of: SO_0000673
so part of: chtf8
location: complement(join(1669251..1670301,1672445..1672562,1673635..1673750))
location: region:1669251-1673750:-1
so has part: feature:1673635-1673750:-1:exon
so has part: feature:1672445-1672562:-1:exon
so has part: feature:1669251-1670301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1673635-1673750:-1:exon

position:1673635:-1
position: 1673635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1672445-1672562:-1:exon

position:1672445:-1
position: 1672445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1672562:-1
position: 1672562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1669251-1670301:-1:exon

position:1670301:-1
position: 1670301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

chtf8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: chtf8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromosome transmission fidelity protein 8 homolog
translation: MVQIPVALPSTRGASSPEWVLMELQGEIEARHEKGLAGSLMGDLHYSREGVPILIIGHHILYGKVSHLEKPLAVLVKHSARREGAESPVEAQGAAHGVNEESTSTCYMVTALIKRKIIFKTRPKPIITNVPKRV
SIO_010081: chtf8
subclass of: SO_0000673
so part of: chtf8
location: complement(join(1670044..1670301,1672445..1672562,1673635..1673663))
location: region:1670044-1673663:-1
so has part: feature:1673635-1673663:-1:exon
so has part: feature:1672445-1672562:-1:exon
so has part: feature:1670044-1670301:-1:exon

XP_032891503.1
type: Protein
SIO_000068: ncbiprotein

position:1670044:-1
position: 1670044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1673663:-1
position: 1673663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1673635-1673663:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1672445-1672562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670044-1670301:-1:exon

LOC116982405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar RNA-associated protein 4 homolog isoform X2
translation: MGEYRLHRVRFFDLVPSAVRGLAHHRAARRLGLARADGSLEFFNFASNFVQEKVIPGDRKRLIEAISWIGQDRLVSVGLSGEIIEYDLQRLCPKYSLDAFGGPLWCMGCNCEETHLAVGCEDGSVKLFEIVPEKLQFERNLDRQKGRVLSLAWHKSGTMIVTGSLDTIRVLDVKSGHCKRHIRVDRGDITFRNRKCVIWAVGFLSDFSVVSADSAGKMQFWDWKTGTLLKTHPVTKCDVLSMSVNESEDSIAVGTAEGTVVQFQRVAVQSDVAGAQWVRTKTFKHHTHDVRAVVHAMSALVSGGVDAQLVIRPLMDQVEIKSYETALRKILFPHRNLVCCSRTENLLLFHFPEQLELWRLGSSQAAGAPGDVLPVSKKPDKLLELKSKSYSHIRCCALSPCGTWIASSTIYKLRLYRIQYKNDSININTISRFTKTLPPAHRLLFSADSTRLFVASDHSQIQVVDLTMLGSKSIHSLAPKSDCLEPVCLLAVSADGSWLAAASYNCEINVYNLTQFKHHCTIPVYNHLSTAMAINPHSNNLVIVHADQQMFEFSIVEKRYTEWSRKLQQQGLHTLWLERDTPIIHVTFNPAVPTHIILHDTYMFCIIDQSLPLPTDRSQLHNQSFLKHLSANARKNQEHAFKICKKFKPLLHVELLFDGSLVVVERPVMDINAQLPAPVRQKKFAT
SIO_010081: LOC116982405
subclass of: SO_0000673
so part of: LOC116982405
location: join(1673769..1673927,1676200..1676391,1678217..1678301,1681597..1681686,1682114..1682325,1683173..1683344,1683425..1683516,1685381..1685477,1686956..1687020,1688411..1688533,1688815..1688971,1691554..1691660,1692339..1692434,1693737..1693922,1694195..1694305,1695633..1695749)
location: region:1673769-1695749:1
so has part: feature:1673769-1673927:1:exon
so has part: feature:1676200-1676391:1:exon
so has part: feature:1678217-1678301:1:exon
so has part: feature:1681597-1681686:1:exon
so has part: feature:1682114-1682325:1:exon
so has part: feature:1683173-1683344:1:exon
so has part: feature:1683425-1683516:1:exon
so has part: feature:1685381-1685477:1:exon
so has part: feature:1686956-1687020:1:exon
so has part: feature:1688411-1688533:1:exon
so has part: feature:1688815-1688971:1:exon
so has part: feature:1691554-1691660:1:exon
so has part: feature:1692339-1692434:1:exon
so has part: feature:1693737-1693922:1:exon
so has part: feature:1694195-1694305:1:exon
so has part: feature:1695633-1695749:1:exon

XP_032891502.1
type: Protein
SIO_000068: ncbiprotein

position:1673769:1
position: 1673769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695749:1
position: 1695749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1673769-1673927:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1676200-1676391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1678217-1678301:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1681597-1681686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1682114-1682325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1683173-1683344:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1683425-1683516:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1685381-1685477:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1686956-1687020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1688411-1688533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1688815-1688971:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1691554-1691660:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1692339-1692434:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1693737-1693922:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1694195-1694305:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1695633-1695749:1:exon

sntb2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: sntb2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1701894..1722232
location: region:1701894-1722232:1
so has part: feature:1701894-1722232:1:exon
subclass of: SO_0000010

116982407
type: Gene
SIO_000068: ncbigene

position:1701894:1
position: 1701894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1722232:1
position: 1722232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1701894-1722232:1:exon

sntb2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: sntb2
product: syntrophin beta 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033035613.1
SIO_010081: sntb2
subclass of: SO_0000673
so part of: sntb2
location: join(1701894..1702357,1702422..1702723,1713731..1713920,1714843..1715038,1715599..1715741,1716894..1717090,1717902..1718092,1718950..1722232)
location: region:1701894-1722232:1
so has part: feature:1701894-1702357:1:exon
so has part: feature:1702422-1702723:1:exon
so has part: feature:1713731-1713920:1:exon
so has part: feature:1714843-1715038:1:exon
so has part: feature:1715599-1715741:1:exon
so has part: feature:1716894-1717090:1:exon
so has part: feature:1717902-1718092:1:exon
so has part: feature:1718950-1722232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1701894-1702357:1:exon

position:1702357:1
position: 1702357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1702422-1702723:1:exon

position:1702422:1
position: 1702422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1702723:1
position: 1702723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1713731-1713920:1:exon

position:1713731:1
position: 1713731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1713920:1
position: 1713920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1714843-1715038:1:exon

position:1714843:1
position: 1714843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1715038:1
position: 1715038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1715599-1715741:1:exon

position:1715599:1
position: 1715599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1715741:1
position: 1715741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1716894-1717090:1:exon

position:1716894:1
position: 1716894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1717090:1
position: 1717090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1717902-1718092:1:exon

position:1717902:1
position: 1717902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1718092:1
position: 1718092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1718950-1722232:1:exon

position:1718950:1
position: 1718950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sntb2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: sntb2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: beta-2-syntrophin
translation: MAVAVAAAELLLRSGPLEIFLRERGWHRVQAELRQSSLRLSGEGPPPKANAWDGLSNGSPRARSPSPSPVHMSPARPGIHGGSPGTVIHGGSPGTVIHGGSPGTVIHGGSPGTVMHGGSPGTAIHEGSPGTVMHGGSPGTVMHRQPRDGGQPGPPGLGTGDSPGPGSAALPDRVRTVRVLKQEAGGLGISIKGGRENRMPIVISKIFRGLAADRTGALFVGDAILAVNGAGLQDATHDQAVQALKKAGKEVTLEVTYIQEVTQYFKKPSLIADLAWDSLMPQSPYLGGDSSGSKDSKIFPLKMCYVTRNLSMSDPENRLFELRSPDGRHAIVLRGRDAATAHAWFMAIHGSIAALTPQVLVELREVLGPSCRAVQHLGWLAEQLKMEGGKQEWKPVVAILTDKDLLLYKAVPWNRDLWASPCQIHPLLATRLVHSGSARSSPSISSELMFATRTGSRQGIETHVFRVETHRELSTWTRMLVRGCHGASELIKEVTLGCTWNGRDVKLTINYESGFVMSQGGAMSDSPNILLQYPFERLKSSADDGIRMLYLDFEGPEGELALDLHSCPKPAVFVVHSFLSAKVTRMGLVV
SIO_010081: sntb2
subclass of: SO_0000673
so part of: sntb2
location: join(1701895..1702357,1702422..1702723,1713731..1713920,1714843..1715038,1715599..1715741,1716894..1717090,1717902..1718092,1718950..1719042)
location: region:1701895-1719042:1
so has part: feature:1701895-1702357:1:exon
so has part: feature:1702422-1702723:1:exon
so has part: feature:1713731-1713920:1:exon
so has part: feature:1714843-1715038:1:exon
so has part: feature:1715599-1715741:1:exon
so has part: feature:1716894-1717090:1:exon
so has part: feature:1717902-1718092:1:exon
so has part: feature:1718950-1719042:1:exon

XP_032891504.1
type: Protein
SIO_000068: ncbiprotein

position:1701895:1
position: 1701895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1719042:1
position: 1719042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1701895-1702357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1702422-1702723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1713731-1713920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1714843-1715038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1715599-1715741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1716894-1717090:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1717902-1718092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1718950-1719042:1:exon

vps4a
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: vps4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1723669..1757725
location: region:1723669-1757725:1
so has part: feature:1723669-1757725:1:exon
subclass of: SO_0000010

116982408
type: Gene
SIO_000068: ncbigene

position:1723669:1
position: 1723669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1757725:1
position: 1757725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1723669-1757725:1:exon

vps4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: vps4a
product: vacuolar protein sorting 4 homolog A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033035614.1
SIO_010081: vps4a
subclass of: SO_0000673
so part of: vps4a
location: join(1723669..1723904,1732659..1732770,1733591..1733738,1736200..1736261,1741773..1741892,1746212..1746368,1753519..1753667,1754660..1754741,1754840..1755059,1756613..1756753,1757292..1757725)
location: region:1723669-1757725:1
so has part: feature:1723669-1723904:1:exon
so has part: feature:1732659-1732770:1:exon
so has part: feature:1733591-1733738:1:exon
so has part: feature:1736200-1736261:1:exon
so has part: feature:1741773-1741892:1:exon
so has part: feature:1746212-1746368:1:exon
so has part: feature:1753519-1753667:1:exon
so has part: feature:1754660-1754741:1:exon
so has part: feature:1754840-1755059:1:exon
so has part: feature:1756613-1756753:1:exon
so has part: feature:1757292-1757725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1723669-1723904:1:exon

position:1723904:1
position: 1723904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1732659-1732770:1:exon

position:1732659:1
position: 1732659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1732770:1
position: 1732770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1733591-1733738:1:exon

position:1733591:1
position: 1733591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1733738:1
position: 1733738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1736200-1736261:1:exon

position:1736200:1
position: 1736200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1736261:1
position: 1736261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1741773-1741892:1:exon

position:1741773:1
position: 1741773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1741892:1
position: 1741892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1746212-1746368:1:exon

position:1746212:1
position: 1746212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1746368:1
position: 1746368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1753519-1753667:1:exon

position:1753519:1
position: 1753519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1753667:1
position: 1753667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1754660-1754741:1:exon

position:1754660:1
position: 1754660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1754741:1
position: 1754741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1754840-1755059:1:exon

position:1754840:1
position: 1754840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1755059:1
position: 1755059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1756613-1756753:1:exon

position:1756613:1
position: 1756613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1756753:1
position: 1756753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1757292-1757725:1:exon

position:1757292:1
position: 1757292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

vps4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: vps4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 4A
translation: MSAPNTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHGDKAKESIRAKCVQYLDRAEKLKEYLKNKDKQGKKPVKESQQNDKGSDSDSEGENPEKKKLQEQLMGAIVMEKPNVRWNDVAGLEVAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHRPSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNSSDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEEPARVHMFNIHLGTTPHCLTEADFRELGRKTEGYSGADIGVIVRDALMQPVRKVQSATHFKKMQGPSRTNPNVMVDDLLTPCSPGDPAAIELTWVDVPSDKLLEPVVCMVDMLRSLATTRPTVNSDDLHKVKKFTEDFGQEG
SIO_010081: vps4a
subclass of: SO_0000673
so part of: vps4a
location: join(1723881..1723904,1732659..1732770,1733591..1733738,1736200..1736261,1741773..1741892,1746212..1746368,1753519..1753667,1754660..1754741,1754840..1755059,1756613..1756753,1757292..1757393)
location: region:1723881-1757393:1
so has part: feature:1723881-1723904:1:exon
so has part: feature:1732659-1732770:1:exon
so has part: feature:1733591-1733738:1:exon
so has part: feature:1736200-1736261:1:exon
so has part: feature:1741773-1741892:1:exon
so has part: feature:1746212-1746368:1:exon
so has part: feature:1753519-1753667:1:exon
so has part: feature:1754660-1754741:1:exon
so has part: feature:1754840-1755059:1:exon
so has part: feature:1756613-1756753:1:exon
so has part: feature:1757292-1757393:1:exon

XP_032891505.1
type: Protein
SIO_000068: ncbiprotein

position:1723881:1
position: 1723881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1757393:1
position: 1757393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1723881-1723904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1732659-1732770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1733591-1733738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1736200-1736261:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1741773-1741892:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1746212-1746368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1753519-1753667:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1754660-1754741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1754840-1755059:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1756613-1756753:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1757292-1757393:1:exon

pdf
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: pdf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1761893..1763944)
location: region:1761893-1763944:-1
so has part: feature:1761893-1763944:-1:exon
subclass of: SO_0000010

116982409
type: Gene
SIO_000068: ncbigene

position:1761893:-1
position: 1761893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1763944:-1
position: 1763944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1761893-1763944:-1:exon

pdf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pdf
product: peptide deformylase, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033035616.1
SIO_010081: pdf
subclass of: SO_0000673
so part of: pdf
location: complement(join(1761893..1762250,1763337..1763829,1763866..1763944))
location: region:1761893-1763944:-1
so has part: feature:1763866-1763944:-1:exon
so has part: feature:1763337-1763829:-1:exon
so has part: feature:1761893-1762250:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1763866-1763944:-1:exon

position:1763866:-1
position: 1763866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1763337-1763829:-1:exon

position:1763337:-1
position: 1763337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1763829:-1
position: 1763829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1761893-1762250:-1:exon

position:1762250:-1
position: 1762250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pdf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: pdf
product: peptide deformylase, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033035615.1
SIO_010081: pdf
subclass of: SO_0000673
so part of: pdf
location: complement(join(1761893..1762250,1763337..1763944))
location: region:1761893-1763944:-1
so has part: feature:1763337-1763944:-1:exon
so has part: feature:1761893-1762250:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1763337-1763944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1761893-1762250:-1:exon

pdf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pdf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptide deformylase, mitochondrial isoform X2
translation: MFRTRALSSLQLLRGALFPCARPGLVHALGGPARRYRVEQRSYWQALRRRLLGPPEPPYRRPCLVGTPVLRAVPADQVRGPEVQRLVHALVAALRRADAVGLSAPQLGVALRVLVLEVPERVLEAENARVREARDMVAVPLRVIVNPRIRVVDPRPVLLPEACHSLPGIAACVARHRAVEVTGLDEQGQPLRWTVSGWTARILQHEVDHLDGRLFIDLMDSRTFQNLRWQEALERASW
SIO_010081: pdf
subclass of: SO_0000673
so part of: pdf
location: complement(join(1762081..1762250,1763337..1763829,1763866..1763919))
location: region:1762081-1763919:-1
so has part: feature:1763866-1763919:-1:exon
so has part: feature:1763337-1763829:-1:exon
so has part: feature:1762081-1762250:-1:exon

XP_032891507.1
type: Protein
SIO_000068: ncbiprotein

position:1762081:-1
position: 1762081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1763919:-1
position: 1763919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1763866-1763919:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763337-1763829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1762081-1762250:-1:exon

pdf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: pdf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptide deformylase, mitochondrial isoform X1
translation: MFRTRALSSLQLLRGALFPCARPGLVHAQCPCARPGLVHALGGPARRYRVEQRSYWQALRRRLLGPPEPPYRRPCLVGTPVLRAVPADQVRGPEVQRLVHALVAALRRADAVGLSAPQLGVALRVLVLEVPERVLEAENARVREARDMVAVPLRVIVNPRIRVVDPRPVLLPEACHSLPGIAACVARHRAVEVTGLDEQGQPLRWTVSGWTARILQHEVDHLDGRLFIDLMDSRTFQNLRWQEALERASW
SIO_010081: pdf
subclass of: SO_0000673
so part of: pdf
location: complement(join(1762081..1762250,1763337..1763919))
location: region:1762081-1763919:-1
so has part: feature:1763337-1763919:-1:exon
so has part: feature:1762081-1762250:-1:exon

XP_032891506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1763337-1763919:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1762081-1762250:-1:exon

LOC116982411
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982411
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1788554..1843500)
location: region:1788554-1843500:-1
so has part: feature:1788554-1843500:-1:exon
subclass of: SO_0000010

116982411
type: Gene
SIO_000068: ncbigene

position:1788554:-1
position: 1788554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1843500:-1
position: 1843500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1788554-1843500:-1:exon

LOC116982411
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982411
product: 1,5-anhydro-D-fructose reductase-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033035620.1
SIO_010081: LOC116982411
subclass of: SO_0000673
so part of: LOC116982411
location: complement(join(1788554..1788718,1791404..1791486,1792823..1792906,1798140..1798227,1799118..1799230,1809623..1809739,1812304..1812381,1821408..1821524,1843147..1843500))
location: region:1788554-1843500:-1
so has part: feature:1843147-1843500:-1:exon
so has part: feature:1821408-1821524:-1:exon
so has part: feature:1812304-1812381:-1:exon
so has part: feature:1809623-1809739:-1:exon
so has part: feature:1799118-1799230:-1:exon
so has part: feature:1798140-1798227:-1:exon
so has part: feature:1792823-1792906:-1:exon
so has part: feature:1791404-1791486:-1:exon
so has part: feature:1788554-1788718:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1843147-1843500:-1:exon

position:1843147:-1
position: 1843147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1821408-1821524:-1:exon

position:1821408:-1
position: 1821408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1821524:-1
position: 1821524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1812304-1812381:-1:exon

position:1812304:-1
position: 1812304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1812381:-1
position: 1812381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1809623-1809739:-1:exon

position:1809623:-1
position: 1809623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1809739:-1
position: 1809739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1799118-1799230:-1:exon

position:1799118:-1
position: 1799118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1799230:-1
position: 1799230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1798140-1798227:-1:exon

position:1798140:-1
position: 1798140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1798227:-1
position: 1798227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1792823-1792906:-1:exon

position:1792823:-1
position: 1792823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1792906:-1
position: 1792906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1791404-1791486:-1:exon

position:1791404:-1
position: 1791404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1791486:-1
position: 1791486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1788554-1788718:-1:exon

position:1788718:-1
position: 1788718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116982411
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982411
product: 1,5-anhydro-D-fructose reductase-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033035619.1
SIO_010081: LOC116982411
subclass of: SO_0000673
so part of: LOC116982411
location: complement(join(1788554..1788718,1791404..1791486,1792823..1792906,1798140..1798227,1799118..1799230,1809623..1809739,1821408..1821524,1825428..1825595,1843147..1843500))
location: region:1788554-1843500:-1
so has part: feature:1843147-1843500:-1:exon
so has part: feature:1825428-1825595:-1:exon
so has part: feature:1821408-1821524:-1:exon
so has part: feature:1809623-1809739:-1:exon
so has part: feature:1799118-1799230:-1:exon
so has part: feature:1798140-1798227:-1:exon
so has part: feature:1792823-1792906:-1:exon
so has part: feature:1791404-1791486:-1:exon
so has part: feature:1788554-1788718:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1843147-1843500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1825428-1825595:-1:exon

position:1825428:-1
position: 1825428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1825595:-1
position: 1825595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1821408-1821524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1809623-1809739:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1799118-1799230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798140-1798227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1792823-1792906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1791404-1791486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1788554-1788718:-1:exon

LOC116982411
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982411
product: 1,5-anhydro-D-fructose reductase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033035618.1
SIO_010081: LOC116982411
subclass of: SO_0000673
so part of: LOC116982411
location: complement(join(1788554..1788718,1791404..1791486,1792823..1792906,1798140..1798227,1799118..1799230,1809623..1809739,1812304..1812378,1821408..1821524,1825428..1825595,1843147..1843500))
location: region:1788554-1843500:-1
so has part: feature:1843147-1843500:-1:exon
so has part: feature:1825428-1825595:-1:exon
so has part: feature:1821408-1821524:-1:exon
so has part: feature:1812304-1812378:-1:exon
so has part: feature:1809623-1809739:-1:exon
so has part: feature:1799118-1799230:-1:exon
so has part: feature:1798140-1798227:-1:exon
so has part: feature:1792823-1792906:-1:exon
so has part: feature:1791404-1791486:-1:exon
so has part: feature:1788554-1788718:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1843147-1843500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1825428-1825595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1821408-1821524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812304-1812378:-1:exon

position:1812378:-1
position: 1812378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1809623-1809739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1799118-1799230:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1798140-1798227:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1792823-1792906:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1791404-1791486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1788554-1788718:-1:exon

LOC116982411
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982411
product: 1,5-anhydro-D-fructose reductase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033035617.1
SIO_010081: LOC116982411
subclass of: SO_0000673
so part of: LOC116982411
location: complement(join(1788554..1788718,1791404..1791486,1792823..1792906,1798140..1798227,1799118..1799230,1809623..1809739,1812304..1812381,1821408..1821524,1825428..1825595,1843147..1843499))
location: region:1788554-1843499:-1
so has part: feature:1843147-1843499:-1:exon
so has part: feature:1825428-1825595:-1:exon
so has part: feature:1821408-1821524:-1:exon
so has part: feature:1812304-1812381:-1:exon
so has part: feature:1809623-1809739:-1:exon
so has part: feature:1799118-1799230:-1:exon
so has part: feature:1798140-1798227:-1:exon
so has part: feature:1792823-1792906:-1:exon
so has part: feature:1791404-1791486:-1:exon
so has part: feature:1788554-1788718:-1:exon

position:1843499:-1
position: 1843499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1843147-1843499:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1825428-1825595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1821408-1821524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812304-1812381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1809623-1809739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1799118-1799230:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1798140-1798227:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1792823-1792906:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1791404-1791486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1788554-1788718:-1:exon

LOC116982411
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982411
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aldo-keto reductase family 1 member B1-like isoform X4
translation: MERSGRGEMNVSTARRQLNDGSWMPLLGFGTWKLWCTFHAPEDVKPSVMETLHNLQLTYLNLYLIHFPVGFQKVPGELLPRHEGRVLVSEIDYVDTWKAMEALVDEGFVKSIGVSNFNISQLQRLLSKARIFPAVNQVELHPYLTQTELVEFCMSRNIALTAFSPLGSPGRSLVFLNESADPKDLLKDPVVKMIAEKHSKSPAQILLRFHIQRNIATIPKSISPERICKNTEVFDFELTEGDLHLLLGLNRNWRVCQMKIVQDHRFYPFTDS
SIO_010081: LOC116982411
subclass of: SO_0000673
so part of: LOC116982411
location: complement(join(1788679..1788718,1791404..1791486,1792823..1792906,1798140..1798227,1799118..1799230,1809623..1809739,1812304..1812381,1821408..1821524,1843147..1843245))
location: region:1788679-1843245:-1
so has part: feature:1843147-1843245:-1:exon
so has part: feature:1821408-1821524:-1:exon
so has part: feature:1812304-1812381:-1:exon
so has part: feature:1809623-1809739:-1:exon
so has part: feature:1799118-1799230:-1:exon
so has part: feature:1798140-1798227:-1:exon
so has part: feature:1792823-1792906:-1:exon
so has part: feature:1791404-1791486:-1:exon
so has part: feature:1788679-1788718:-1:exon

XP_032891511.1
type: Protein
SIO_000068: ncbiprotein

position:1788679:-1
position: 1788679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1843245:-1
position: 1843245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1843147-1843245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1821408-1821524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1812304-1812381:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1809623-1809739:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1799118-1799230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798140-1798227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1792823-1792906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1791404-1791486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1788679-1788718:-1:exon

LOC116982411
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982411
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aldo-keto reductase family 1 member B1-like isoform X3
translation: MERSGRGEMNVSTARRQLNDGSWMPLLGFGTWKSEPEMVGDAVSAAIDAGYRHIDGAYSYMNEAEVGAAVKRKISEGVVTREDLFIVSKLWCTFHAPEDVKPSVMETLHNLQLTYLNLYLIHFPVGFQAMEALVDEGFVKSIGVSNFNISQLQRLLSKARIFPAVNQVELHPYLTQTELVEFCMSRNIALTAFSPLGSPGRSLVFLNESADPKDLLKDPVVKMIAEKHSKSPAQILLRFHIQRNIATIPKSISPERICKNTEVFDFELTEGDLHLLLGLNRNWRVCQMKIVQDHRFYPFTDS
SIO_010081: LOC116982411
subclass of: SO_0000673
so part of: LOC116982411
location: complement(join(1788679..1788718,1791404..1791486,1792823..1792906,1798140..1798227,1799118..1799230,1809623..1809739,1821408..1821524,1825428..1825595,1843147..1843245))
location: region:1788679-1843245:-1
so has part: feature:1843147-1843245:-1:exon
so has part: feature:1825428-1825595:-1:exon
so has part: feature:1821408-1821524:-1:exon
so has part: feature:1809623-1809739:-1:exon
so has part: feature:1799118-1799230:-1:exon
so has part: feature:1798140-1798227:-1:exon
so has part: feature:1792823-1792906:-1:exon
so has part: feature:1791404-1791486:-1:exon
so has part: feature:1788679-1788718:-1:exon

XP_032891510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1843147-1843245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1825428-1825595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1821408-1821524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1809623-1809739:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1799118-1799230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798140-1798227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1792823-1792906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1791404-1791486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1788679-1788718:-1:exon

LOC116982411
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982411
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1,5-anhydro-D-fructose reductase-like isoform X2
translation: MERSGRGEMNVSTARRQLNDGSWMPLLGFGTWKSEPEMVGDAVSAAIDAGYRHIDGAYSYMNEAEVGAAVKRKISEGVVTREDLFIVSKLWCTFHAPEDVKPSVMETLHNLQLTYLNLYLIHFPVGFQVPGELLPRHEGRVLVSEIDYVDTWKAMEALVDEGFVKSIGVSNFNISQLQRLLSKARIFPAVNQVELHPYLTQTELVEFCMSRNIALTAFSPLGSPGRSLVFLNESADPKDLLKDPVVKMIAEKHSKSPAQILLRFHIQRNIATIPKSISPERICKNTEVFDFELTEGDLHLLLGLNRNWRVCQMKIVQDHRFYPFTDS
SIO_010081: LOC116982411
subclass of: SO_0000673
so part of: LOC116982411
location: complement(join(1788679..1788718,1791404..1791486,1792823..1792906,1798140..1798227,1799118..1799230,1809623..1809739,1812304..1812378,1821408..1821524,1825428..1825595,1843147..1843245))
location: region:1788679-1843245:-1
so has part: feature:1843147-1843245:-1:exon
so has part: feature:1825428-1825595:-1:exon
so has part: feature:1821408-1821524:-1:exon
so has part: feature:1812304-1812378:-1:exon
so has part: feature:1809623-1809739:-1:exon
so has part: feature:1799118-1799230:-1:exon
so has part: feature:1798140-1798227:-1:exon
so has part: feature:1792823-1792906:-1:exon
so has part: feature:1791404-1791486:-1:exon
so has part: feature:1788679-1788718:-1:exon

XP_032891509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1843147-1843245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1825428-1825595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1821408-1821524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812304-1812378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1809623-1809739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1799118-1799230:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1798140-1798227:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1792823-1792906:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1791404-1791486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1788679-1788718:-1:exon

LOC116982411
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982411
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1,5-anhydro-D-fructose reductase-like isoform X1
translation: MERSGRGEMNVSTARRQLNDGSWMPLLGFGTWKSEPEMVGDAVSAAIDAGYRHIDGAYSYMNEAEVGAAVKRKISEGVVTREDLFIVSKLWCTFHAPEDVKPSVMETLHNLQLTYLNLYLIHFPVGFQKVPGELLPRHEGRVLVSEIDYVDTWKAMEALVDEGFVKSIGVSNFNISQLQRLLSKARIFPAVNQVELHPYLTQTELVEFCMSRNIALTAFSPLGSPGRSLVFLNESADPKDLLKDPVVKMIAEKHSKSPAQILLRFHIQRNIATIPKSISPERICKNTEVFDFELTEGDLHLLLGLNRNWRVCQMKIVQDHRFYPFTDS
SIO_010081: LOC116982411
subclass of: SO_0000673
so part of: LOC116982411
location: complement(join(1788679..1788718,1791404..1791486,1792823..1792906,1798140..1798227,1799118..1799230,1809623..1809739,1812304..1812381,1821408..1821524,1825428..1825595,1843147..1843245))
location: region:1788679-1843245:-1
so has part: feature:1843147-1843245:-1:exon
so has part: feature:1825428-1825595:-1:exon
so has part: feature:1821408-1821524:-1:exon
so has part: feature:1812304-1812381:-1:exon
so has part: feature:1809623-1809739:-1:exon
so has part: feature:1799118-1799230:-1:exon
so has part: feature:1798140-1798227:-1:exon
so has part: feature:1792823-1792906:-1:exon
so has part: feature:1791404-1791486:-1:exon
so has part: feature:1788679-1788718:-1:exon

XP_032891508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1843147-1843245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1825428-1825595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1821408-1821524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1812304-1812381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1809623-1809739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1799118-1799230:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1798140-1798227:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1792823-1792906:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1791404-1791486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1788679-1788718:-1:exon

tat
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tat
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1855305..1885770)
location: region:1855305-1885770:-1
so has part: feature:1855305-1885770:-1:exon
subclass of: SO_0000010

116982412
type: Gene
SIO_000068: ncbigene

position:1855305:-1
position: 1855305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1885770:-1
position: 1885770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1855305-1885770:-1:exon

tat
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tat
product: tyrosine aminotransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033035621.1
SIO_010081: tat
subclass of: SO_0000673
so part of: tat
location: complement(join(1855305..1856057,1856677..1856775,1856873..1856956,1858392..1858520,1860885..1861037,1863357..1863409,1869624..1869762,1870454..1870612,1874662..1874729,1883469..1883573,1885126..1885334,1885641..1885770))
location: region:1855305-1885770:-1
so has part: feature:1885641-1885770:-1:exon
so has part: feature:1885126-1885334:-1:exon
so has part: feature:1883469-1883573:-1:exon
so has part: feature:1874662-1874729:-1:exon
so has part: feature:1870454-1870612:-1:exon
so has part: feature:1869624-1869762:-1:exon
so has part: feature:1863357-1863409:-1:exon
so has part: feature:1860885-1861037:-1:exon
so has part: feature:1858392-1858520:-1:exon
so has part: feature:1856873-1856956:-1:exon
so has part: feature:1856677-1856775:-1:exon
so has part: feature:1855305-1856057:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1885641-1885770:-1:exon

position:1885641:-1
position: 1885641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1885126-1885334:-1:exon

position:1885126:-1
position: 1885126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1885334:-1
position: 1885334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1883469-1883573:-1:exon

position:1883469:-1
position: 1883469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1883573:-1
position: 1883573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1874662-1874729:-1:exon

position:1874662:-1
position: 1874662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1874729:-1
position: 1874729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1870454-1870612:-1:exon

position:1870454:-1
position: 1870454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1870612:-1
position: 1870612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1869624-1869762:-1:exon

position:1869624:-1
position: 1869624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1869762:-1
position: 1869762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1863357-1863409:-1:exon

position:1863357:-1
position: 1863357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1863409:-1
position: 1863409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1860885-1861037:-1:exon

position:1860885:-1
position: 1860885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1861037:-1
position: 1861037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1858392-1858520:-1:exon

position:1858392:-1
position: 1858392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858520:-1
position: 1858520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1856873-1856956:-1:exon

position:1856873:-1
position: 1856873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856956:-1
position: 1856956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1856677-1856775:-1:exon

position:1856677:-1
position: 1856677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856775:-1
position: 1856775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1855305-1856057:-1:exon

position:1856057:-1
position: 1856057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tat
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tat
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine aminotransferase
translation: MASDSLMILDSILSSSGFTYSERLKSRYTKWNIRASEMSKRTFNPIRAIVDNMKIKPNPEKAMITLSIGDPTVFGNLPTNENILQAMKEAVDSGRFNGYAPSVGYHTSRDAVANFYSCPESPLKAKDVILTSGCSQAIELAINVLANPGQNILIPRPGFSLYKTLAVSLGIEVKFYNLLPERSWEIDLQHLEALIDDKTACIIVNNPSNPCGSVFNKSHLQNILTVATRNYLPIIVDEIYGDMVFPESQFIGLGSLSRSVPILSCGGLAKRWLVPGWRMGWILIHDRNDILSREVRNGLVCLSQRILGPCTIVQGALEDILNKTTQDFYDDTINILKSNADLCFNALSMVPGLRPIRPCGSMYMMVGIDIDDFPEFKNDIDFTERMISEQSVFCLPATCFEYPNFFRVVTTVPEDLMLEACNRIREFCEVHFQSQEHCSVPDIECDK
SIO_010081: tat
subclass of: SO_0000673
so part of: tat
location: complement(join(1855908..1856057,1856677..1856775,1856873..1856956,1858392..1858520,1860885..1861037,1863357..1863409,1869624..1869762,1870454..1870612,1874662..1874729,1883469..1883573,1885126..1885330))
location: region:1855908-1885330:-1
so has part: feature:1885126-1885330:-1:exon
so has part: feature:1883469-1883573:-1:exon
so has part: feature:1874662-1874729:-1:exon
so has part: feature:1870454-1870612:-1:exon
so has part: feature:1869624-1869762:-1:exon
so has part: feature:1863357-1863409:-1:exon
so has part: feature:1860885-1861037:-1:exon
so has part: feature:1858392-1858520:-1:exon
so has part: feature:1856873-1856956:-1:exon
so has part: feature:1856677-1856775:-1:exon
so has part: feature:1855908-1856057:-1:exon

XP_032891512.1
type: Protein
SIO_000068: ncbiprotein

position:1855908:-1
position: 1855908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1885330:-1
position: 1885330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1885126-1885330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1883469-1883573:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1874662-1874729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1870454-1870612:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1869624-1869762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1863357-1863409:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1860885-1861037:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1858392-1858520:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1856873-1856956:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1856677-1856775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1855908-1856057:-1:exon

rad1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1902606..1917786
location: region:1902606-1917786:1
so has part: feature:1902606-1917786:1:exon
subclass of: SO_0000010

116982413
type: Gene
SIO_000068: ncbigene

position:1902606:1
position: 1902606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1917786:1
position: 1917786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1902606-1917786:1:exon

rad1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rad1
product: RAD1 checkpoint DNA exonuclease
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 28 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033035622.1
SIO_010081: rad1
subclass of: SO_0000673
so part of: rad1
location: join(1902606..1902827,1909948..1910056,1910721..1910979,1914915..1915013,1915106..1917786)
location: region:1902606-1917786:1
so has part: feature:1902606-1902827:1:exon
so has part: feature:1909948-1910056:1:exon
so has part: feature:1910721-1910979:1:exon
so has part: feature:1914915-1915013:1:exon
so has part: feature:1915106-1917786:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1902606-1902827:1:exon

position:1902827:1
position: 1902827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1909948-1910056:1:exon

position:1909948:1
position: 1909948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1910056:1
position: 1910056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1910721-1910979:1:exon

position:1910721:1
position: 1910721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1910979:1
position: 1910979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1914915-1915013:1:exon

position:1914915:1
position: 1914915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1915013:1
position: 1915013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1915106-1917786:1:exon

position:1915106:1
position: 1915106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

rad1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell cycle checkpoint protein RAD1
translation: MLRSPGHPGDDERFVLVASLDNARNLSNLLKAIHFRDQVTFFASANGIRMTAEAAKSVQGNAFIQASIFQEFRIEEDSVIFLINLTVLLDCLTIFSASSLPGVTTALRMCYRGYGYPLTLFLEESGVVTVCKIQTQEPEETLDFDFCSTNVVNKIILQSESLRETFAELDMSSDVLQITMSPEKPYFRLSTFGDAGSTHCDYPKDSDMIEAFHCNQTQCNKYKISLLKPSTKALALSSKVSLRTDNRGFLSLQYMIRNEDGQICFVEYYCCPDEEMEGLDS
SIO_010081: rad1
subclass of: SO_0000673
so part of: rad1
location: join(1902633..1902827,1909948..1910056,1910721..1910979,1914915..1915013,1915106..1915289)
location: region:1902633-1915289:1
so has part: feature:1902633-1902827:1:exon
so has part: feature:1909948-1910056:1:exon
so has part: feature:1910721-1910979:1:exon
so has part: feature:1914915-1915013:1:exon
so has part: feature:1915106-1915289:1:exon

XP_032891513.1
type: Protein
SIO_000068: ncbiprotein

position:1902633:1
position: 1902633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1915289:1
position: 1915289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1902633-1902827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1909948-1910056:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1910721-1910979:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1914915-1915013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1915106-1915289:1:exon

LOC116982414
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1980275..1993514)
location: region:1980275-1993514:-1
so has part: feature:1980275-1993514:-1:exon
subclass of: SO_0000010

116982414
type: Gene
SIO_000068: ncbigene

position:1980275:-1
position: 1980275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1993514:-1
position: 1993514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1980275-1993514:-1:exon

LOC116982414
type: Constant Region
subclass of: SO_0001834
RO_0002162: 386614
gene: LOC116982414
standard name: Ig heavy chain C region, membrane-bound form-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
SIO_010081: LOC116982414
subclass of: SO_0000673
so part of: LOC116982414
location: complement(join(1980275..1980732,1980867..1980994,1983821..1984150,1985261..1985563,1986002..1986326,1987758..1988053,1992221..1992311,1993382..1993514))
location: region:1980275-1993514:-1
so has part: feature:1993382-1993514:-1:exon
so has part: feature:1992221-1992311:-1:exon
so has part: feature:1987758-1988053:-1:exon
so has part: feature:1986002-1986326:-1:exon
so has part: feature:1985261-1985563:-1:exon
so has part: feature:1983821-1984150:-1:exon
so has part: feature:1980867-1980994:-1:exon
so has part: feature:1980275-1980732:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1993382-1993514:-1:exon

position:1993382:-1
position: 1993382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1992221-1992311:-1:exon

position:1992221:-1
position: 1992221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1992311:-1
position: 1992311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1987758-1988053:-1:exon

position:1987758:-1
position: 1987758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1988053:-1
position: 1988053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1986002-1986326:-1:exon

position:1986002:-1
position: 1986002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1986326:-1
position: 1986326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1985261-1985563:-1:exon

position:1985261:-1
position: 1985261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1985563:-1
position: 1985563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1983821-1984150:-1:exon

position:1983821:-1
position: 1983821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1984150:-1
position: 1984150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1980867-1980994:-1:exon

position:1980867:-1
position: 1980867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1980994:-1
position: 1980994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1980275-1980732:-1:exon

position:1980732:-1
position: 1980732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116982414
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982414
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Ig heavy chain C region, membrane-bound form-like isoform X1
SIO_010081: LOC116982414
subclass of: SO_0000673
so part of: LOC116982414
location: complement(join(1980724..1980732,1980867..1980994,1983821..1984150,1985261..1985563,1986002..1986326,1987758..1988053,1992221..1992239))
location: region:1980724-1992239:-1
so has part: feature:1992221-1992239:-1:exon
so has part: feature:1987758-1988053:-1:exon
so has part: feature:1986002-1986326:-1:exon
so has part: feature:1985261-1985563:-1:exon
so has part: feature:1983821-1984150:-1:exon
so has part: feature:1980867-1980994:-1:exon
so has part: feature:1980724-1980732:-1:exon

position:1980724:-1
position: 1980724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1992239:-1
position: 1992239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1992221-1992239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1987758-1988053:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1986002-1986326:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1985261-1985563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1983821-1984150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1980867-1980994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980724-1980732:-1:exon

LOC116982416
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982416
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1993421..1994051)
location: region:1993421-1994051:-1
so has part: feature:1993421-1994051:-1:exon
subclass of: SO_0000010

116982416
type: Gene
SIO_000068: ncbigene

position:1993421:-1
position: 1993421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1994051:-1
position: 1994051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1993421-1994051:-1:exon

LOC116982416
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 386614
gene: LOC116982416
standard name: Ig heavy chain V region-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
SIO_010081: LOC116982416
subclass of: SO_0000673
so part of: LOC116982416
location: complement(join(1993421..1993764,1993944..1994051))
location: region:1993421-1994051:-1
so has part: feature:1993944-1994051:-1:exon
so has part: feature:1993421-1993764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1993944-1994051:-1:exon

position:1993944:-1
position: 1993944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1993421-1993764:-1:exon

position:1993764:-1
position: 1993764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116982416
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982416
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Ig heavy chain V region-like
SIO_010081: LOC116982416
subclass of: SO_0000673
so part of: LOC116982416
location: complement(join(1993451..1993764,1993944..1993989))
location: region:1993451-1993989:-1
so has part: feature:1993944-1993989:-1:exon
so has part: feature:1993451-1993764:-1:exon

position:1993451:-1
position: 1993451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1993989:-1
position: 1993989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1993944-1993989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1993451-1993764:-1:exon

LOC116983011
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116983011
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2099117..2099308
location: region:2099117-2099308:1
so has part: feature:2099117-2099308:1:exon
subclass of: SO_0000623

116983011
type: Gene
SIO_000068: ncbigene

position:2099117:1
position: 2099117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2099308:1
position: 2099308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2099117-2099308:1:exon

LOC116983011
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snRNA
gene: LOC116983011
product: U2 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004414591.1
SIO_010081: LOC116983011
subclass of: SO_0000673
so part of: LOC116983011
location: 2099117..2099308
location: region:2099117-2099308:1
so has part: feature:2099117-2099308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2099117-2099308:1:exon

LOC116982966
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2285944..2516577
location: region:2285944-2516577:1
so has part: feature:2285944-2516577:1:exon
subclass of: SO_0000010

116982966
type: Gene
SIO_000068: ncbigene

position:2285944:1
position: 2285944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2516577:1
position: 2516577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2285944-2516577:1:exon

LOC116982966
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982966
product: uncharacterized LOC116982966
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033036499.1
SIO_010081: LOC116982966
subclass of: SO_0000673
so part of: LOC116982966
location: join(2285944..2285954,2287290..2287409,2291973..2292113,2292543..2292721,2299731..2299799,2516469..2516577)
location: region:2285944-2516577:1
so has part: feature:2285944-2285954:1:exon
so has part: feature:2287290-2287409:1:exon
so has part: feature:2291973-2292113:1:exon
so has part: feature:2292543-2292721:1:exon
so has part: feature:2299731-2299799:1:exon
so has part: feature:2516469-2516577:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2285944-2285954:1:exon

position:2285954:1
position: 2285954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2287290-2287409:1:exon

position:2287290:1
position: 2287290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2287409:1
position: 2287409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2291973-2292113:1:exon

position:2291973:1
position: 2291973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2292113:1
position: 2292113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2292543-2292721:1:exon

position:2292543:1
position: 2292543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2292721:1
position: 2292721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2299731-2299799:1:exon

position:2299731:1
position: 2299731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2299799:1
position: 2299799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2516469-2516577:1:exon

position:2516469:1
position: 2516469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116982966
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116982966
translation: MRKRCGGDAWRPEGEWVKWPRSRSLFPAPRRSFCCSDPAGTITRPRLATNGYNQHNDDASSSSGGSTKSGAPSYMETLLSCLESQVEDDWMLHKKRSNRKKPGPVPGVKRSPSNSSVNSLSSYISNVSNSSKHSQRSLHLGSSNGWQEPVGLAYFESFSPLAKLWGWISLLSPGCTRKGQTARGRDLCLVSNVHRPTVQSTV
SIO_010081: LOC116982966
subclass of: SO_0000673
so part of: LOC116982966
location: join(2285944..2285954,2287290..2287409,2291973..2292113,2292543..2292721,2299731..2299799,2516469..2516557)
location: region:2285944-2516557:1
so has part: feature:2285944-2285954:1:exon
so has part: feature:2287290-2287409:1:exon
so has part: feature:2291973-2292113:1:exon
so has part: feature:2292543-2292721:1:exon
so has part: feature:2299731-2299799:1:exon
so has part: feature:2516469-2516557:1:exon

XP_032892390.1
type: Protein
SIO_000068: ncbiprotein

position:2516557:1
position: 2516557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2285944-2285954:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2287290-2287409:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2291973-2292113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2292543-2292721:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2299731-2299799:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2516469-2516557:1:exon

LOC116982417
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982417
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2416077..2432109
location: region:2416077-2432109:1
so has part: feature:2416077-2432109:1:exon
subclass of: SO_0000011

116982417
type: Gene
SIO_000068: ncbigene

position:2416077:1
position: 2416077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2432109:1
position: 2432109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2416077-2432109:1:exon

LOC116982417
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116982417
product: uncharacterized LOC116982417
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004414456.1
SIO_010081: LOC116982417
subclass of: SO_0000673
so part of: LOC116982417
location: join(2416077..2416105,2430059..2430271,2432075..2432109)
location: region:2416077-2432109:1
so has part: feature:2416077-2416105:1:exon
so has part: feature:2430059-2430271:1:exon
so has part: feature:2432075-2432109:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2416077-2416105:1:exon

position:2416105:1
position: 2416105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2430059-2430271:1:exon

position:2430059:1
position: 2430059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2430271:1
position: 2430271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2432075-2432109:1:exon

position:2432075:1
position: 2432075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116982418
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982418
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2881938..2904852
location: region:2881938-2904852:1
so has part: feature:2881938-2904852:1:exon
subclass of: SO_0000010

116982418
type: Gene
SIO_000068: ncbigene

position:2881938:1
position: 2881938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2904852:1
position: 2904852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881938-2904852:1:exon

LOC116982418
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982418
product: MARVEL domain-containing protein 3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033035627.1
SIO_010081: LOC116982418
subclass of: SO_0000673
so part of: LOC116982418
location: join(2881938..2882178,2884570..2884882,2884928..2885003,2892817..2892944,2903629..2904852)
location: region:2881938-2904852:1
so has part: feature:2881938-2882178:1:exon
so has part: feature:2884570-2884882:1:exon
so has part: feature:2884928-2885003:1:exon
so has part: feature:2892817-2892944:1:exon
so has part: feature:2903629-2904852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2881938-2882178:1:exon

position:2882178:1
position: 2882178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2884570-2884882:1:exon

position:2884570:1
position: 2884570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2884882:1
position: 2884882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2884928-2885003:1:exon

position:2884928:1
position: 2884928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2885003:1
position: 2885003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2892817-2892944:1:exon

position:2892817:1
position: 2892817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2892944:1
position: 2892944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2903629-2904852:1:exon

position:2903629:1
position: 2903629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116982418
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982418
product: MARVEL domain-containing protein 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033035626.1
SIO_010081: LOC116982418
subclass of: SO_0000673
so part of: LOC116982418
location: join(2881938..2882172,2884568..2885003,2892817..2892944,2903629..2904852)
location: region:2881938-2904852:1
so has part: feature:2881938-2882172:1:exon
so has part: feature:2884568-2885003:1:exon
so has part: feature:2892817-2892944:1:exon
so has part: feature:2903629-2904852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2881938-2882172:1:exon

position:2882172:1
position: 2882172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2884568-2885003:1:exon

position:2884568:1
position: 2884568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2892817-2892944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2903629-2904852:1:exon

LOC116982418
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982418
product: MARVEL domain-containing protein 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033035625.1
SIO_010081: LOC116982418
subclass of: SO_0000673
so part of: LOC116982418
location: join(2881939..2882178,2884570..2885003,2892817..2892944,2903629..2904852)
location: region:2881939-2904852:1
so has part: feature:2881939-2882178:1:exon
so has part: feature:2884570-2885003:1:exon
so has part: feature:2892817-2892944:1:exon
so has part: feature:2903629-2904852:1:exon

position:2881939:1
position: 2881939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881939-2882178:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2884570-2885003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2892817-2892944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2903629-2904852:1:exon

LOC116982418
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982418
product: MARVEL domain-containing protein 3-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033035628.1
SIO_010081: LOC116982418
subclass of: SO_0000673
so part of: LOC116982418
location: join(2882937..2882941,2884627..2885003,2892817..2892944,2903629..2904852)
location: region:2882937-2904852:1
so has part: feature:2882937-2882941:1:exon
so has part: feature:2884627-2885003:1:exon
so has part: feature:2892817-2892944:1:exon
so has part: feature:2903629-2904852:1:exon

position:2882937:1
position: 2882937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2882937-2882941:1:exon

position:2882941:1
position: 2882941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2884627-2885003:1:exon

position:2884627:1
position: 2884627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2892817-2892944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2903629-2904852:1:exon

LOC116982418
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982418
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MARVEL domain-containing protein 3-like isoform X1
translation: MAHSANKADVNLREQDNKHCHHEHYSKHSNPRKSHGDGSRNTRGRDYSQQNSDPHRDVRRGMPEGKRSQVRDVHNRGDRTREDKQRMEREYHKRKNRSHPSKCDREDYLQTHEDISHSNQQPNYKTEKEIPLPHDGRDFYGYKYYAETLPSEYVITEGKISMHEFKHEDSGEISNRSSCLYLCTNRGIVQMLEAVLNLLVLVCVVASYVVLSGYSSNGGLATSFFSINSNYSPLEGEQLKDVQKLDREFILMRAPGLYSGIGVTIAMFAITLAIMIKGAQNLHTMPLKWLIFEVIFNILASLGYAAAVGVYLYFVLQVNGTDICKRRERVYARYGLNWMNCDLSGSDAAAACFAIILVICHCVSAILAAKLCRTVRELNKNTPHS
SIO_010081: LOC116982418
subclass of: SO_0000673
so part of: LOC116982418
location: join(2884573..2885003,2892817..2892944,2903629..2904227)
location: region:2884573-2904227:1
so has part: feature:2884573-2885003:1:exon
so has part: feature:2892817-2892944:1:exon
so has part: feature:2903629-2904227:1:exon

XP_032891516.1
type: Protein
SIO_000068: ncbiprotein

position:2884573:1
position: 2884573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2904227:1
position: 2904227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2884573-2885003:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2892817-2892944:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2903629-2904227:1:exon

LOC116982418
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982418
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MARVEL domain-containing protein 3-like isoform X1
translation: MAHSANKADVNLREQDNKHCHHEHYSKHSNPRKSHGDGSRNTRGRDYSQQNSDPHRDVRRGMPEGKRSQVRDVHNRGDRTREDKQRMEREYHKRKNRSHPSKCDREDYLQTHEDISHSNQQPNYKTEKEIPLPHDGRDFYGYKYYAETLPSEYVITEGKISMHEFKHEDSGEISNRSSCLYLCTNRGIVQMLEAVLNLLVLVCVVASYVVLSGYSSNGGLATSFFSINSNYSPLEGEQLKDVQKLDREFILMRAPGLYSGIGVTIAMFAITLAIMIKGAQNLHTMPLKWLIFEVIFNILASLGYAAAVGVYLYFVLQVNGTDICKRRERVYARYGLNWMNCDLSGSDAAAACFAIILVICHCVSAILAAKLCRTVRELNKNTPHS
SIO_010081: LOC116982418
subclass of: SO_0000673
so part of: LOC116982418
location: join(2884573..2885003,2892817..2892944,2903629..2904227)
location: region:2884573-2904227:1
so has part: feature:2884573-2885003:1:exon
so has part: feature:2892817-2892944:1:exon
so has part: feature:2903629-2904227:1:exon

XP_032891517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2884573-2885003:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2892817-2892944:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2903629-2904227:1:exon

LOC116982418
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982418
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MARVEL domain-containing protein 3-like isoform X2
translation: MAHSANKADVNLREQDNKHCHHEHYSKHSNPRKSHGDGSRNTRGRDYSQQNSDPHRDVRRGMPEGKRSQVRDVHNRGDRTREDKQRMEREYHKRKNRSHPSKCDQQPNYKTEKEIPLPHDGRDFYGYKYYAETLPSEYVITEGKISMHEFKHEDSGEISNRSSCLYLCTNRGIVQMLEAVLNLLVLVCVVASYVVLSGYSSNGGLATSFFSINSNYSPLEGEQLKDVQKLDREFILMRAPGLYSGIGVTIAMFAITLAIMIKGAQNLHTMPLKWLIFEVIFNILASLGYAAAVGVYLYFVLQVNGTDICKRRERVYARYGLNWMNCDLSGSDAAAACFAIILVICHCVSAILAAKLCRTVRELNKNTPHS
SIO_010081: LOC116982418
subclass of: SO_0000673
so part of: LOC116982418
location: join(2884573..2884882,2884928..2885003,2892817..2892944,2903629..2904227)
location: region:2884573-2904227:1
so has part: feature:2884573-2884882:1:exon
so has part: feature:2884928-2885003:1:exon
so has part: feature:2892817-2892944:1:exon
so has part: feature:2903629-2904227:1:exon

XP_032891518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2884573-2884882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2884928-2885003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2892817-2892944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2903629-2904227:1:exon

LOC116982418
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982418
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MARVEL domain-containing protein 3-like isoform X3
translation: MPEGKRSQVRDVHNRGDRTREDKQRMEREYHKRKNRSHPSKCDREDYLQTHEDISHSNQQPNYKTEKEIPLPHDGRDFYGYKYYAETLPSEYVITEGKISMHEFKHEDSGEISNRSSCLYLCTNRGIVQMLEAVLNLLVLVCVVASYVVLSGYSSNGGLATSFFSINSNYSPLEGEQLKDVQKLDREFILMRAPGLYSGIGVTIAMFAITLAIMIKGAQNLHTMPLKWLIFEVIFNILASLGYAAAVGVYLYFVLQVNGTDICKRRERVYARYGLNWMNCDLSGSDAAAACFAIILVICHCVSAILAAKLCRTVRELNKNTPHS
SIO_010081: LOC116982418
subclass of: SO_0000673
so part of: LOC116982418
location: join(2884756..2885003,2892817..2892944,2903629..2904227)
location: region:2884756-2904227:1
so has part: feature:2884756-2885003:1:exon
so has part: feature:2892817-2892944:1:exon
so has part: feature:2903629-2904227:1:exon

XP_032891519.1
type: Protein
SIO_000068: ncbiprotein

position:2884756:1
position: 2884756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2884756-2885003:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2892817-2892944:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2903629-2904227:1:exon

phlpp2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: phlpp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2930690..3067080)
location: region:2930690-3067080:-1
so has part: feature:2930690-3067080:-1:exon
subclass of: SO_0000010

116982419
type: Gene
SIO_000068: ncbigene

position:2930690:-1
position: 2930690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3067080:-1
position: 3067080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2930690-3067080:-1:exon

phlpp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: phlpp2
product: PH domain and leucine rich repeat protein phosphatase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033035629.1
SIO_010081: phlpp2
subclass of: SO_0000673
so part of: phlpp2
location: complement(join(2930690..2932114,2933050..2933281,2938215..2938409,2946094..2946207,2947806..2947936,2951519..2951681,2956158..2956358,2966661..2966816,2968012..2968107,2968324..2968384,2969027..2969229,2970177..2970407,2972902..2973048,2987559..2987707,2994059..2994184,3007093..3007283,3026411..3026544,3057048..3057346,3066558..3067080))
location: region:2930690-3067080:-1
so has part: feature:3066558-3067080:-1:exon
so has part: feature:3057048-3057346:-1:exon
so has part: feature:3026411-3026544:-1:exon
so has part: feature:3007093-3007283:-1:exon
so has part: feature:2994059-2994184:-1:exon
so has part: feature:2987559-2987707:-1:exon
so has part: feature:2972902-2973048:-1:exon
so has part: feature:2970177-2970407:-1:exon
so has part: feature:2969027-2969229:-1:exon
so has part: feature:2968324-2968384:-1:exon
so has part: feature:2968012-2968107:-1:exon
so has part: feature:2966661-2966816:-1:exon
so has part: feature:2956158-2956358:-1:exon
so has part: feature:2951519-2951681:-1:exon
so has part: feature:2947806-2947936:-1:exon
so has part: feature:2946094-2946207:-1:exon
so has part: feature:2938215-2938409:-1:exon
so has part: feature:2933050-2933281:-1:exon
so has part: feature:2930690-2932114:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3066558-3067080:-1:exon

position:3066558:-1
position: 3066558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3057048-3057346:-1:exon

position:3057048:-1
position: 3057048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3057346:-1
position: 3057346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3026411-3026544:-1:exon

position:3026411:-1
position: 3026411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3026544:-1
position: 3026544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3007093-3007283:-1:exon

position:3007093:-1
position: 3007093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3007283:-1
position: 3007283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2994059-2994184:-1:exon

position:2994059:-1
position: 2994059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2994184:-1
position: 2994184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2987559-2987707:-1:exon

position:2987559:-1
position: 2987559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2987707:-1
position: 2987707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2972902-2973048:-1:exon

position:2972902:-1
position: 2972902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2973048:-1
position: 2973048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2970177-2970407:-1:exon

position:2970177:-1
position: 2970177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2970407:-1
position: 2970407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2969027-2969229:-1:exon

position:2969027:-1
position: 2969027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2969229:-1
position: 2969229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2968324-2968384:-1:exon

position:2968324:-1
position: 2968324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2968384:-1
position: 2968384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2968012-2968107:-1:exon

position:2968012:-1
position: 2968012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2968107:-1
position: 2968107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2966661-2966816:-1:exon

position:2966661:-1
position: 2966661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2966816:-1
position: 2966816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2956158-2956358:-1:exon

position:2956158:-1
position: 2956158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2956358:-1
position: 2956358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2951519-2951681:-1:exon

position:2951519:-1
position: 2951519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2951681:-1
position: 2951681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2947806-2947936:-1:exon

position:2947806:-1
position: 2947806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2947936:-1
position: 2947936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2946094-2946207:-1:exon

position:2946094:-1
position: 2946094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2946207:-1
position: 2946207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2938215-2938409:-1:exon

position:2938215:-1
position: 2938215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2938409:-1
position: 2938409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2933050-2933281:-1:exon

position:2933050:-1
position: 2933050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2933281:-1
position: 2933281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2930690-2932114:-1:exon

position:2932114:-1
position: 2932114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

phlpp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: phlpp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH domain leucine-rich repeat-containing protein phosphatase 2
translation: MAEVSSSAADTEAAKLGGDVEPKWPVADGAAAGPVEPLEPLCPPAKAGPGCNLSSAAAGRPVRVLKRNMKRNASRSCLGKKSHLGLREREWLKADVRRGCVYIHGKEMVLSNASSTSSSGTLLLSTSSSFGPDLQLVLCSTETTTAELCTQDSDDLYLQLHGDFIRRLNPDERPLQILYDYLSGLGFQDPLRIQEESAIADLSCMIRYFHGKPSSIEQLDQILLSGVFSVRKGKTHLHKWSERQVILCGTCLIVSSVKDCQMGKMHVLPLTGGKVEEVKRRQYCLMFSSAGQQGQTYYVTFDSYPECLRWHRQASKVVSQRIGTVDLSCYSLEELPEYLYFSQDITHLNLRHNFMHADTGLCHLNRFTQLKSLNLSNNKLTTFPTSLCEIGTLTEVNLSCNKIHNIPKEIGNLQNLQTFILDGNCLQTLPAELGNVQELMHLGLSFNDFKVIPEVCTILTAMEKLSMAGNLLETLTLETLGQMTHIKHLDLRLNLIESLVIDSLEAINHVTFLDLRDNLLTELDLSSFASIEHLHCGRNNLFTLTISGFSLRTLYVGSNQLTTLSVYPLPGQLVHIDLSRNKLEAVPDWVCDAKKLELLDVSHNLITELPMRLLCSLSLQKLLVGHNYLHSLPNQLEHIALEVFDVQHNQLHELPDCLFLKALNLRCLNVSANNLESLPIGSDTEESLSILQELYLTGNKLTDKCVSMLTGHPRLRVLHLAYNQLQSFPASKLSKFELLEELNLSGNKLKAVPTTITNCKRLHTLIVHSNSIAVFPEILHLPEIKLVDLSCNELTEIMMPETLPASLQELDLAGNLNLVLDHKTLEMFSHITTLKIDQKPPAPCNDSVGNPTIWNHGYSEMAGHRNKLCLSVLALDSFGDNPEALYGIFDGDKNMEIPRLLQCTVGDVLAEELQQSCISTVYMTHTFLVSHRKLGMVGQKLGSSTVLCHIRRDPIDHSSYFTLTVANVGNSQVVLCRDGQPLSLSKLFSLEQCAEELARVKQQKAIITEDNKVNGVTSCTRLLGCTYLFPWVLPRPHVRTISLTAQDEYLILGNKALWENLSYAEAIEAVRTVPDPLAAAKKLCTLAQANGCHDNIGAVVVYLSIGDGSCTCEIQGVPLTSPTVFAPINMPVKDGAHVSGTPSSSSGIASEFNSEMSASEVSSEVGSTASDEQPATSLEAATILRAERRCSLHPSPSASVFQRQLSSATFSSNHSDNGLDSDDDQPVEGVFSNGSKLEVEVDIHCVHFQVPGNTNISQVHDEGLFVSMSGDDIALSYLKEQKQNGVNSQPFLTISKEGGDLKKSLSATNLQGKKFPNGSVVPLEKSHNIIEVATEAPKKKYGYFAAPAQADPEDQLVVPPHLEEEVKEQMKQHQDPISEAESERDPRFTQQEVYDTAL
SIO_010081: phlpp2
subclass of: SO_0000673
so part of: phlpp2
location: complement(join(2930945..2932114,2933050..2933281,2938215..2938409,2946094..2946207,2947806..2947936,2951519..2951681,2956158..2956358,2966661..2966816,2968012..2968107,2968324..2968384,2969027..2969229,2970177..2970407,2972902..2973048,2987559..2987707,2994059..2994184,3007093..3007283,3026411..3026544,3057048..3057346,3066558..3066755))
location: region:2930945-3066755:-1
so has part: feature:3066558-3066755:-1:exon
so has part: feature:3057048-3057346:-1:exon
so has part: feature:3026411-3026544:-1:exon
so has part: feature:3007093-3007283:-1:exon
so has part: feature:2994059-2994184:-1:exon
so has part: feature:2987559-2987707:-1:exon
so has part: feature:2972902-2973048:-1:exon
so has part: feature:2970177-2970407:-1:exon
so has part: feature:2969027-2969229:-1:exon
so has part: feature:2968324-2968384:-1:exon
so has part: feature:2968012-2968107:-1:exon
so has part: feature:2966661-2966816:-1:exon
so has part: feature:2956158-2956358:-1:exon
so has part: feature:2951519-2951681:-1:exon
so has part: feature:2947806-2947936:-1:exon
so has part: feature:2946094-2946207:-1:exon
so has part: feature:2938215-2938409:-1:exon
so has part: feature:2933050-2933281:-1:exon
so has part: feature:2930945-2932114:-1:exon

XP_032891520.1
type: Protein
SIO_000068: ncbiprotein

position:2930945:-1
position: 2930945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3066755:-1
position: 3066755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3066558-3066755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3057048-3057346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3026411-3026544:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3007093-3007283:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2994059-2994184:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2987559-2987707:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2972902-2973048:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2970177-2970407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2969027-2969229:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2968324-2968384:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2968012-2968107:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2966661-2966816:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2956158-2956358:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2951519-2951681:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2947806-2947936:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2946094-2946207:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2938215-2938409:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2933050-2933281:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2930945-2932114:-1:exon

ap1g1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ap1g1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3167283..3307777)
location: region:3167283-3307777:-1
so has part: feature:3167283-3307777:-1:exon
subclass of: SO_0000010

116982420
type: Gene
SIO_000068: ncbigene

position:3167283:-1
position: 3167283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3307777:-1
position: 3307777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3167283-3307777:-1:exon

ap1g1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ap1g1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_033035631.1
SIO_010081: ap1g1
subclass of: SO_0000673
so part of: ap1g1
location: complement(join(3167283..3173626,3183757..3183855,3191148..3191308,3192040..3192141,3193505..3193631,3200705..3200846,3203115..3203219,3203356..3203483,3216294..3216383,3223166..3223288,3225506..3225560,3226780..3226920,3228197..3228310,3231052..3231107,3246423..3246521,3247201..3247281,3256078..3256173,3267300..3267376,3269830..3269926,3282449..3282590,3287443..3287567,3288619..3288822,3307693..3307777))
location: region:3167283-3307777:-1
so has part: feature:3307693-3307777:-1:exon
so has part: feature:3288619-3288822:-1:exon
so has part: feature:3287443-3287567:-1:exon
so has part: feature:3282449-3282590:-1:exon
so has part: feature:3269830-3269926:-1:exon
so has part: feature:3267300-3267376:-1:exon
so has part: feature:3256078-3256173:-1:exon
so has part: feature:3247201-3247281:-1:exon
so has part: feature:3246423-3246521:-1:exon
so has part: feature:3231052-3231107:-1:exon
so has part: feature:3228197-3228310:-1:exon
so has part: feature:3226780-3226920:-1:exon
so has part: feature:3225506-3225560:-1:exon
so has part: feature:3223166-3223288:-1:exon
so has part: feature:3216294-3216383:-1:exon
so has part: feature:3203356-3203483:-1:exon
so has part: feature:3203115-3203219:-1:exon
so has part: feature:3200705-3200846:-1:exon
so has part: feature:3193505-3193631:-1:exon
so has part: feature:3192040-3192141:-1:exon
so has part: feature:3191148-3191308:-1:exon
so has part: feature:3183757-3183855:-1:exon
so has part: feature:3167283-3173626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3307693-3307777:-1:exon

position:3307693:-1
position: 3307693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3288619-3288822:-1:exon

position:3288619:-1
position: 3288619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3288822:-1
position: 3288822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3287443-3287567:-1:exon

position:3287443:-1
position: 3287443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3287567:-1
position: 3287567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3282449-3282590:-1:exon

position:3282449:-1
position: 3282449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3282590:-1
position: 3282590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3269830-3269926:-1:exon

position:3269830:-1
position: 3269830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3269926:-1
position: 3269926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3267300-3267376:-1:exon

position:3267300:-1
position: 3267300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3267376:-1
position: 3267376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3256078-3256173:-1:exon

position:3256078:-1
position: 3256078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3256173:-1
position: 3256173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3247201-3247281:-1:exon

position:3247201:-1
position: 3247201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3247281:-1
position: 3247281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3246423-3246521:-1:exon

position:3246423:-1
position: 3246423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3246521:-1
position: 3246521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3231052-3231107:-1:exon

position:3231052:-1
position: 3231052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3231107:-1
position: 3231107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3228197-3228310:-1:exon

position:3228197:-1
position: 3228197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3228310:-1
position: 3228310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3226780-3226920:-1:exon

position:3226780:-1
position: 3226780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3226920:-1
position: 3226920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3225506-3225560:-1:exon

position:3225506:-1
position: 3225506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3225560:-1
position: 3225560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3223166-3223288:-1:exon

position:3223166:-1
position: 3223166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3223288:-1
position: 3223288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3216294-3216383:-1:exon

position:3216294:-1
position: 3216294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3216383:-1
position: 3216383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3203356-3203483:-1:exon

position:3203356:-1
position: 3203356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3203483:-1
position: 3203483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3203115-3203219:-1:exon

position:3203115:-1
position: 3203115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3203219:-1
position: 3203219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3200705-3200846:-1:exon

position:3200705:-1
position: 3200705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3200846:-1
position: 3200846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3193505-3193631:-1:exon

position:3193505:-1
position: 3193505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3193631:-1
position: 3193631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3192040-3192141:-1:exon

position:3192040:-1
position: 3192040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3192141:-1
position: 3192141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3191148-3191308:-1:exon

position:3191148:-1
position: 3191148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3191308:-1
position: 3191308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3183757-3183855:-1:exon

position:3183757:-1
position: 3183757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3183855:-1
position: 3183855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3167283-3173626:-1:exon

position:3173626:-1
position: 3173626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ap1g1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ap1g1
product: adaptor related protein complex 1 subunit gamma 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033035630.1
SIO_010081: ap1g1
subclass of: SO_0000673
so part of: ap1g1
location: complement(join(3167283..3173626,3183757..3183855,3191148..3191308,3192040..3192141,3193505..3193631,3200705..3200846,3203115..3203219,3203356..3203483,3216294..3216383,3223166..3223288,3225506..3225560,3226780..3226920,3228197..3228310,3231052..3231107,3246423..3246521,3247201..3247281,3256078..3256173,3263932..3263940,3267300..3267376,3269830..3269926,3282449..3282590,3287443..3287567,3288619..3288822,3307693..3307777))
location: region:3167283-3307777:-1
so has part: feature:3307693-3307777:-1:exon
so has part: feature:3288619-3288822:-1:exon
so has part: feature:3287443-3287567:-1:exon
so has part: feature:3282449-3282590:-1:exon
so has part: feature:3269830-3269926:-1:exon
so has part: feature:3267300-3267376:-1:exon
so has part: feature:3263932-3263940:-1:exon
so has part: feature:3256078-3256173:-1:exon
so has part: feature:3247201-3247281:-1:exon
so has part: feature:3246423-3246521:-1:exon
so has part: feature:3231052-3231107:-1:exon
so has part: feature:3228197-3228310:-1:exon
so has part: feature:3226780-3226920:-1:exon
so has part: feature:3225506-3225560:-1:exon
so has part: feature:3223166-3223288:-1:exon
so has part: feature:3216294-3216383:-1:exon
so has part: feature:3203356-3203483:-1:exon
so has part: feature:3203115-3203219:-1:exon
so has part: feature:3200705-3200846:-1:exon
so has part: feature:3193505-3193631:-1:exon
so has part: feature:3192040-3192141:-1:exon
so has part: feature:3191148-3191308:-1:exon
so has part: feature:3183757-3183855:-1:exon
so has part: feature:3167283-3173626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3307693-3307777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3288619-3288822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3287443-3287567:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3282449-3282590:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3269830-3269926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3267300-3267376:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3263932-3263940:-1:exon

position:3263932:-1
position: 3263932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3263940:-1
position: 3263940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3256078-3256173:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3247201-3247281:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3246423-3246521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3231052-3231107:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3228197-3228310:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3226780-3226920:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3225506-3225560:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3223166-3223288:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3216294-3216383:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3203356-3203483:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3203115-3203219:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3200705-3200846:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3193505-3193631:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3192040-3192141:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3191148-3191308:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3183757-3183855:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3167283-3173626:-1:exon

ap1g1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ap1g1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X2
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECASIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRMLGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDLCDPDFKSDCASSIFLAGEKYAPSKRWHIDTIMKVLTTAGSYVRDDAVPNLIQLITNGVEMHAYTVQKLYKAVWEDISQQPLVQVGAWCMGEYGDLLVSGQCEEEEPIQVTEDEVMDVLENVLQSSMSTSVTRGYSLTAIMKLSTRFTVNVNRIRKIISIYGSSIDVELQQRAVEYNALFKKFDHMRSALLERMPIMEKITTNGLTEIAQINGEAEPIIVDAKLASITIQPSNQANDLLDLLGGSDVTPVIQTLPPSKPNSVGGELLDLLGGLDLSGGTLPLGGQAPQFSQTPFLLDNLASQPVFNDLSSGIPPVTAYSKGGLNIDFNFERSNTNPNVTVVTINATNLTEEDMMDFVFQAAVPKTFQLQLLSPSNNIIPARSAGAVTQVIKVLNPQKQQLRMRIKVTYNLNGSPVQDLAEVNNFPPQSWQ
SIO_010081: ap1g1
subclass of: SO_0000673
so part of: ap1g1
location: complement(join(3173525..3173626,3183757..3183855,3191148..3191308,3192040..3192141,3193505..3193631,3200705..3200846,3203115..3203219,3203356..3203483,3216294..3216383,3223166..3223288,3225506..3225560,3226780..3226920,3228197..3228310,3231052..3231107,3246423..3246521,3247201..3247281,3256078..3256173,3267300..3267376,3269830..3269926,3282449..3282590,3287443..3287567,3288619..3288819))
location: region:3173525-3288819:-1
so has part: feature:3288619-3288819:-1:exon
so has part: feature:3287443-3287567:-1:exon
so has part: feature:3282449-3282590:-1:exon
so has part: feature:3269830-3269926:-1:exon
so has part: feature:3267300-3267376:-1:exon
so has part: feature:3256078-3256173:-1:exon
so has part: feature:3247201-3247281:-1:exon
so has part: feature:3246423-3246521:-1:exon
so has part: feature:3231052-3231107:-1:exon
so has part: feature:3228197-3228310:-1:exon
so has part: feature:3226780-3226920:-1:exon
so has part: feature:3225506-3225560:-1:exon
so has part: feature:3223166-3223288:-1:exon
so has part: feature:3216294-3216383:-1:exon
so has part: feature:3203356-3203483:-1:exon
so has part: feature:3203115-3203219:-1:exon
so has part: feature:3200705-3200846:-1:exon
so has part: feature:3193505-3193631:-1:exon
so has part: feature:3192040-3192141:-1:exon
so has part: feature:3191148-3191308:-1:exon
so has part: feature:3183757-3183855:-1:exon
so has part: feature:3173525-3173626:-1:exon

XP_032891522.1
type: Protein
SIO_000068: ncbiprotein

position:3173525:-1
position: 3173525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3288819:-1
position: 3288819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3288619-3288819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3287443-3287567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3282449-3282590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3269830-3269926:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3267300-3267376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3256078-3256173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3247201-3247281:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3246423-3246521:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3231052-3231107:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3228197-3228310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3226780-3226920:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3225506-3225560:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3223166-3223288:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3216294-3216383:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3203356-3203483:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3203115-3203219:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3200705-3200846:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3193505-3193631:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3192040-3192141:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3191148-3191308:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3183757-3183855:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3173525-3173626:-1:exon

ap1g1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ap1g1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X1
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECASIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRMLGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDLCDPDFKSDCASSIFLAGEKYAPSKRWHIDTIMKVLTTAGSYVRDDAVPNLIQLITNGVEMHAYTVQKLYKAVWEDISQQPLVQVGAWCMGEYGDLLVSGQCEEEEPIQVTEDEVMDVLENVLQSSMSTSVTRGYSLTAIMKLSTRFTVNVNRIRKIISIYGSSIDVELQQRAVEYNALFKKFDHMRSALLERMPIMEKITTNGLTEIAQINGEAEPIIVDAKLASITIQPSNQANDLLDLLGGSDVTPVIQTLPPSKPNSVGGELLDLLGGLDLSGGTLPLGGQAPQFSQTPFLLDNLASQPVFNDLSSGIPPVTAYSKGGLNIDFNFERSNTNPNVTVVTINATNLTEEDMMDFVFQAAVPKTFQLQLLSPSNNIIPARSAGAVTQVIKVLNPQKQQLRMRIKVTYNLNGSPVQDLAEVNNFPPQSWQ
SIO_010081: ap1g1
subclass of: SO_0000673
so part of: ap1g1
location: complement(join(3173525..3173626,3183757..3183855,3191148..3191308,3192040..3192141,3193505..3193631,3200705..3200846,3203115..3203219,3203356..3203483,3216294..3216383,3223166..3223288,3225506..3225560,3226780..3226920,3228197..3228310,3231052..3231107,3246423..3246521,3247201..3247281,3256078..3256173,3263932..3263940,3267300..3267376,3269830..3269926,3282449..3282590,3287443..3287567,3288619..3288819))
location: region:3173525-3288819:-1
so has part: feature:3288619-3288819:-1:exon
so has part: feature:3287443-3287567:-1:exon
so has part: feature:3282449-3282590:-1:exon
so has part: feature:3269830-3269926:-1:exon
so has part: feature:3267300-3267376:-1:exon
so has part: feature:3263932-3263940:-1:exon
so has part: feature:3256078-3256173:-1:exon
so has part: feature:3247201-3247281:-1:exon
so has part: feature:3246423-3246521:-1:exon
so has part: feature:3231052-3231107:-1:exon
so has part: feature:3228197-3228310:-1:exon
so has part: feature:3226780-3226920:-1:exon
so has part: feature:3225506-3225560:-1:exon
so has part: feature:3223166-3223288:-1:exon
so has part: feature:3216294-3216383:-1:exon
so has part: feature:3203356-3203483:-1:exon
so has part: feature:3203115-3203219:-1:exon
so has part: feature:3200705-3200846:-1:exon
so has part: feature:3193505-3193631:-1:exon
so has part: feature:3192040-3192141:-1:exon
so has part: feature:3191148-3191308:-1:exon
so has part: feature:3183757-3183855:-1:exon
so has part: feature:3173525-3173626:-1:exon

XP_032891521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3288619-3288819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3287443-3287567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3282449-3282590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3269830-3269926:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3267300-3267376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3263932-3263940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3256078-3256173:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3247201-3247281:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3246423-3246521:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3231052-3231107:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3228197-3228310:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3226780-3226920:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3225506-3225560:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3223166-3223288:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3216294-3216383:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3203356-3203483:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3203115-3203219:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3200705-3200846:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3193505-3193631:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3192040-3192141:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3191148-3191308:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3183757-3183855:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3173525-3173626:-1:exon

zcchc14
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: zcchc14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3339223..3474080)
location: region:3339223-3474080:-1
so has part: feature:3339223-3474080:-1:exon
subclass of: SO_0000010

116982421
type: Gene
SIO_000068: ncbigene

position:3339223:-1
position: 3339223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3474080:-1
position: 3474080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3339223-3474080:-1:exon

zcchc14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: zcchc14
product: zinc finger CCHC-type containing 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033035633.1
SIO_010081: zcchc14
subclass of: SO_0000673
so part of: zcchc14
location: complement(join(3339223..3341297,3356318..3357775,3365182..3365325,3372459..3372586,3378325..3378416,3385624..3385855,3392822..3392882,3398550..3398644,3407909..3408018,3423991..3424062,3437304..3437377,3446153..3446264,3473071..3474080))
location: region:3339223-3474080:-1
so has part: feature:3473071-3474080:-1:exon
so has part: feature:3446153-3446264:-1:exon
so has part: feature:3437304-3437377:-1:exon
so has part: feature:3423991-3424062:-1:exon
so has part: feature:3407909-3408018:-1:exon
so has part: feature:3398550-3398644:-1:exon
so has part: feature:3392822-3392882:-1:exon
so has part: feature:3385624-3385855:-1:exon
so has part: feature:3378325-3378416:-1:exon
so has part: feature:3372459-3372586:-1:exon
so has part: feature:3365182-3365325:-1:exon
so has part: feature:3356318-3357775:-1:exon
so has part: feature:3339223-3341297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3473071-3474080:-1:exon

position:3473071:-1
position: 3473071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3446153-3446264:-1:exon

position:3446153:-1
position: 3446153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3446264:-1
position: 3446264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3437304-3437377:-1:exon

position:3437304:-1
position: 3437304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3437377:-1
position: 3437377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3423991-3424062:-1:exon

position:3423991:-1
position: 3423991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3424062:-1
position: 3424062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3407909-3408018:-1:exon

position:3407909:-1
position: 3407909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3408018:-1
position: 3408018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3398550-3398644:-1:exon

position:3398550:-1
position: 3398550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3398644:-1
position: 3398644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3392822-3392882:-1:exon

position:3392822:-1
position: 3392822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3392882:-1
position: 3392882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3385624-3385855:-1:exon

position:3385624:-1
position: 3385624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3385855:-1
position: 3385855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3378325-3378416:-1:exon

position:3378325:-1
position: 3378325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3378416:-1
position: 3378416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3372459-3372586:-1:exon

position:3372459:-1
position: 3372459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3372586:-1
position: 3372586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3365182-3365325:-1:exon

position:3365182:-1
position: 3365182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3365325:-1
position: 3365325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3356318-3357775:-1:exon

position:3356318:-1
position: 3356318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3357775:-1
position: 3357775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3339223-3341297:-1:exon

position:3341297:-1
position: 3341297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

zcchc14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: zcchc14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCHC domain-containing protein 14
translation: MMQKQLQRDEVYRWFGELNSSQRVDFICGLLDLCIPLELRFLGSCLEDLAKKDYHSLRDSEIKANNVVDLASLTNMTDEVVRSKLIVSLALLCSDNREASGVLYRTLTHIDSIINNYGLQLHDRTGDEFLLLFTMASNHPSFTFHQKQVLRQELLEIQRIIDSTSNKDSVPVAATSITAANWDSTSAVYKTVHRAESGVHCLQNALQRSAHSCDESSPKRSSVKHSKLNIERIDLKGLQHKKNEKTADYSFEVLWSDSSVTFVTKSNRELKEFLAKLPQMFQDENLESVIPQIKDLDFCTEEKTFAELEPYLRYLISLPPHMIKIDHIQKFFSTTTVNQTSQHLSANTIPVMLHKANTSNGAAVRPICGVASIQCSHNTLQPSVSVSPSCPQSVSGCSASVTCPQPENINPQNPEQMGILEWLKKLRLHKYYPVFKQLTMNKFLSLTEDDLNKFETLTLGAKKKLKMQLELEKEKSERRNINSVGQSPVPSAGIARVTPTSHFGPIHSIRCNPAAEIRVEVEQHRRTATKDSGSSSEYSSSPSSPIAIQGREESSDSADENDRSAETVLDIQIREKPAMLSSQLSNLNTGPWRPTAQVSPVQNETGLAHPSHVSSAISTVQMMPVISSNIAPSRMLNSVRKSERSSFDIKPITGISSPIHTSQTVDLGSKLHEGPTNSIKVEKKFGSLGAMVIDVMPTSPVQASQRSTIVSENNGISSNVVNFGIRTKDGPPSSMDNPSKTTPLSALRMDTCSSTPAPCNSAYNISQSQMKLLVSSPIPTEPLLVGQTAYNSVVQVKSVSPAVISSRTVPYSANTKVAFSTIQCSPVTSISGTFCTNNNNAPANSHTSVSFTNVASMPNCPISSSSPTLSSVAKNSYINSNNGNGGSGINIPLQQQQQTGCNVCSSCGCSGNCGSNPLTINYANYFQSPFSGHSVLTFPIFPFNPLCNNGYISTQYNNNTAFPYPIVPTPGYNTGITPDSIISGPSNFVMPPMQNFLGGTTAVYQTQHILGSTNGSGYKKNGHISCYNCGANGHRAQDCKQPAMDSNQQGTFRLKYAPPSESMDSAD
SIO_010081: zcchc14
subclass of: SO_0000673
so part of: zcchc14
location: complement(join(3341242..3341297,3356318..3357775,3365182..3365325,3372459..3372586,3378325..3378416,3385624..3385855,3392822..3392882,3398550..3398644,3407909..3408018,3423991..3424062,3437304..3437377,3446153..3446264,3473071..3473640))
location: region:3341242-3473640:-1
so has part: feature:3473071-3473640:-1:exon
so has part: feature:3446153-3446264:-1:exon
so has part: feature:3437304-3437377:-1:exon
so has part: feature:3423991-3424062:-1:exon
so has part: feature:3407909-3408018:-1:exon
so has part: feature:3398550-3398644:-1:exon
so has part: feature:3392822-3392882:-1:exon
so has part: feature:3385624-3385855:-1:exon
so has part: feature:3378325-3378416:-1:exon
so has part: feature:3372459-3372586:-1:exon
so has part: feature:3365182-3365325:-1:exon
so has part: feature:3356318-3357775:-1:exon
so has part: feature:3341242-3341297:-1:exon

XP_032891524.1
type: Protein
SIO_000068: ncbiprotein

position:3341242:-1
position: 3341242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3473640:-1
position: 3473640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3473071-3473640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3446153-3446264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3437304-3437377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3423991-3424062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3407909-3408018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3398550-3398644:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3392822-3392882:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3385624-3385855:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3378325-3378416:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3372459-3372586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3365182-3365325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3356318-3357775:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3341242-3341297:-1:exon

LOC116982422
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3483895..3501317
location: region:3483895-3501317:1
so has part: feature:3483895-3501317:1:exon
subclass of: SO_0000010

116982422
type: Gene
SIO_000068: ncbigene

position:3483895:1
position: 3483895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3501317:1
position: 3501317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3483895-3501317:1:exon

LOC116982422
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982422
product: putative flavin-containing monooxygenase FMO GS-OX-like 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033035635.1
SIO_010081: LOC116982422
subclass of: SO_0000673
so part of: LOC116982422
location: join(3483895..3484433,3486674..3486812,3497887..3498026,3500680..3501317)
location: region:3483895-3501317:1
so has part: feature:3483895-3484433:1:exon
so has part: feature:3486674-3486812:1:exon
so has part: feature:3497887-3498026:1:exon
so has part: feature:3500680-3501317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3483895-3484433:1:exon

position:3484433:1
position: 3484433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3486674-3486812:1:exon

position:3486674:1
position: 3486674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3486812:1
position: 3486812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3497887-3498026:1:exon

position:3497887:1
position: 3497887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3498026:1
position: 3498026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3500680-3501317:1:exon

position:3500680:1
position: 3500680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116982422
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982422
product: putative flavin-containing monooxygenase FMO GS-OX-like 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033035636.1
SIO_010081: LOC116982422
subclass of: SO_0000673
so part of: LOC116982422
location: join(3483896..3484433,3486674..3486812,3499823..3499952)
location: region:3483896-3499952:1
so has part: feature:3483896-3484433:1:exon
so has part: feature:3486674-3486812:1:exon
so has part: feature:3499823-3499952:1:exon

position:3483896:1
position: 3483896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3499952:1
position: 3499952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3483896-3484433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3486674-3486812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3499823-3499952:1:exon

position:3499823:1
position: 3499823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116982422
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982422
product: putative flavin-containing monooxygenase FMO GS-OX-like 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_033035634.1
SIO_010081: LOC116982422
subclass of: SO_0000673
so part of: LOC116982422
location: join(3483897..3484433,3486674..3486812,3497887..3498026,3499823..3501317)
location: region:3483897-3501317:1
so has part: feature:3483897-3484433:1:exon
so has part: feature:3486674-3486812:1:exon
so has part: feature:3497887-3498026:1:exon
so has part: feature:3499823-3501317:1:exon

position:3483897:1
position: 3483897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3483897-3484433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3486674-3486812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3497887-3498026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3499823-3501317:1:exon

LOC116982422
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: flavin-containing monooxygenase FMO GS-OX-like 4 isoform X2
translation: MTGRQLQVAVIGAGASGLCAARHLLAKPHIFAPPVVYEQSTGVGGTWVYTERTGKDDHGLPIQASMYRDLRTNLPKEIMGFPDFPFEASPTSFIHHTDVKSYLEKYTEHFEIQRHIKFLTYVELLKPVSRPTEDAHSSWEITSLNLKSQSRSLERYDSVIVCNG
SIO_010081: LOC116982422
subclass of: SO_0000673
so part of: LOC116982422
location: join(3484222..3484433,3486674..3486812,3497887..3498026,3500680..3500683)
location: region:3484222-3500683:1
so has part: feature:3484222-3484433:1:exon
so has part: feature:3486674-3486812:1:exon
so has part: feature:3497887-3498026:1:exon
so has part: feature:3500680-3500683:1:exon

XP_032891526.1
type: Protein
SIO_000068: ncbiprotein

position:3484222:1
position: 3484222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3500683:1
position: 3500683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3484222-3484433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3486674-3486812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3497887-3498026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3500680-3500683:1:exon

LOC116982422
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: flavin-containing monooxygenase FMO GS-OX-like 4 isoform X1
translation: MTGRQLQVAVIGAGASGLCAARHLLAKPHIFAPPVVYEQSTGVGGTWVYTERTGKDDHGLPIQASMYRDLRTNLPKEIMGFPDFPFEASPTSFIHHTDVKSYLEKYTEHFEIQRHIKFLTYVELLKPVSRPTEDAHSSWEITSLNLKSQSRSLERYDSVIVCNGHYSDPLIPHIRGIENFKGQSMHSHEYRFAEPFRGKNLVLLGAGSSGIDIALELCLVANQVVLVYKDSFTSSPVPPNCLLVKGVNKCSQIGVIGNDGIEYPADVLMFCTGYNYTFPFLAKDVGLNVKDHRITPLYKHIVHTTFPTLFFIGICKTVCPFPLFHNQVLFALASLDGTYRLPPKPKMDATTEHEYQSSLQNGIPHRHFHKLDSLQWEYNNELRSLAKRDPLPPVFKDLYETNKEIRKQDLCNYKRFNYKIVSHDTWIKVSPKLL
SIO_010081: LOC116982422
subclass of: SO_0000673
so part of: LOC116982422
location: join(3484222..3484433,3486674..3486812,3497887..3498026,3499823..3500636)
location: region:3484222-3500636:1
so has part: feature:3484222-3484433:1:exon
so has part: feature:3486674-3486812:1:exon
so has part: feature:3497887-3498026:1:exon
so has part: feature:3499823-3500636:1:exon

XP_032891525.1
type: Protein
SIO_000068: ncbiprotein

position:3500636:1
position: 3500636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3484222-3484433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3486674-3486812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3497887-3498026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3499823-3500636:1:exon

LOC116982422
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative flavin-containing monooxygenase FMO GS-OX-like 11 isoform X3
translation: MTGRQLQVAVIGAGASGLCAARHLLAKPHIFAPPVVYEQSTGVGGTWVYTERTGKDDHGLPIQASMYRDLRTNLPKEIMGFPDFPFEASPTSFIHHTDVKSYLEKYTEHFEIQRHIKPLL
SIO_010081: LOC116982422
subclass of: SO_0000673
so part of: LOC116982422
location: join(3484222..3484433,3486674..3486812,3499823..3499834)
location: region:3484222-3499834:1
so has part: feature:3484222-3484433:1:exon
so has part: feature:3486674-3486812:1:exon
so has part: feature:3499823-3499834:1:exon

XP_032891527.1
type: Protein
SIO_000068: ncbiprotein

position:3499834:1
position: 3499834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3484222-3484433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3486674-3486812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3499823-3499834:1:exon

jph3
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: jph3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3511679..3672098
location: region:3511679-3672098:1
so has part: feature:3511679-3672098:1:exon
subclass of: SO_0000010

116982423
type: Gene
SIO_000068: ncbigene

position:3511679:1
position: 3511679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3672098:1
position: 3672098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3511679-3672098:1:exon

jph3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: jph3
product: junctophilin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033035637.1
SIO_010081: jph3
subclass of: SO_0000673
so part of: jph3
location: join(3511679..3513029,3549604..3550378,3634402..3634526,3662305..3663188,3671574..3672098)
location: region:3511679-3672098:1
so has part: feature:3511679-3513029:1:exon
so has part: feature:3549604-3550378:1:exon
so has part: feature:3634402-3634526:1:exon
so has part: feature:3662305-3663188:1:exon
so has part: feature:3671574-3672098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3511679-3513029:1:exon

position:3513029:1
position: 3513029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3549604-3550378:1:exon

position:3549604:1
position: 3549604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3550378:1
position: 3550378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3634402-3634526:1:exon

position:3634402:1
position: 3634402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3634526:1
position: 3634526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3662305-3663188:1:exon

position:3662305:1
position: 3662305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3663188:1
position: 3663188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3671574-3672098:1:exon

position:3671574:1
position: 3671574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

jph3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: jph3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: junctophilin-3
translation: MSRGGRFDFDDGGSYCGGWEDGKAHGYGICTGPKGQGEYAGSWSHGFEVVGVYTWPSGNTYQGTWAQGKRHGIGVESKGKWVYKGEWCHGFKGRYGARESIGTRAKYEGTWNNGLQDGYGTETYRDGGTYQGQWVGGMRHGYGVRQSVPYGIAAVIRSPLRTSINSLRSEHSNGTAMHPDTPAGSPAGCRGGFVLTMHSNNELLSAKNKKKGIFRRSLLSGLKLRKSESKSSLASQRSKQSSFRSEAGMSTVSSTASDINSTISFGEGETDLSVIEDDIDATATEMYVGEWKNDKRSGFGLSHRSDGLKFEGEWLSNKRHGYGCTTFPDGTKEEGKYKQNVLVSGKRKNLIPLRTSKIRDKVDRAVEAAERAAAIAKQKAEISASRTSHAKSKSDVADTAAQKAQDEAQLARITAKEFSPSTQQPGNGIEYQRPTLQNSTENEIDRISSESLPLEESPELYRKGTTPPDLTPEHSPVPSRSSTSPSTSPPKYRKKGTRLVRQMNMECDKGQDIQMLLEGGRSDYPRSAKWNEKQRSGTRRGGSKGSSSSNTTSLVEEIRVRGNECKYNHRLTDRKGAESPTFSWTSYQLHNHDSSKQLHEQDEEKLSNYEMEMKPLQRMDSYVQDTYSEQHHNKLSSRNMMEDYHPDFLSYGVQRLKPTMQNKENFILISPSEPNVQRLDNLRMNVKLEPRSRHDISTSPNSQSVNISQSDEETMVQYKSNSGSNPILVAMVILLNIGVAILFIHFFI
SIO_010081: jph3
subclass of: SO_0000673
so part of: jph3
location: join(3512648..3513029,3549604..3550378,3634402..3634526,3662305..3663188,3671574..3671654)
location: region:3512648-3671654:1
so has part: feature:3512648-3513029:1:exon
so has part: feature:3549604-3550378:1:exon
so has part: feature:3634402-3634526:1:exon
so has part: feature:3662305-3663188:1:exon
so has part: feature:3671574-3671654:1:exon

XP_032891528.1
type: Protein
SIO_000068: ncbiprotein

position:3512648:1
position: 3512648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3671654:1
position: 3671654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3512648-3513029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3549604-3550378:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3634402-3634526:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3662305-3663188:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3671574-3671654:1:exon

klhdc4
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: klhdc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3721155..3808057)
location: region:3721155-3808057:-1
so has part: feature:3721155-3808057:-1:exon
subclass of: SO_0000010

116982424
type: Gene
SIO_000068: ncbigene

position:3721155:-1
position: 3721155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3808057:-1
position: 3808057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3721155-3808057:-1:exon

klhdc4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: klhdc4
product: kelch domain containing 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_033035638.1
SIO_010081: klhdc4
subclass of: SO_0000673
so part of: klhdc4
location: complement(join(3721155..3721520,3724728..3724832,3727693..3728316,3747414..3747492,3758304..3758463,3759692..3759784,3784079..3784215,3784728..3784826,3792532..3792610,3796016..3796107,3807851..3808057))
location: region:3721155-3808057:-1
so has part: feature:3807851-3808057:-1:exon
so has part: feature:3796016-3796107:-1:exon
so has part: feature:3792532-3792610:-1:exon
so has part: feature:3784728-3784826:-1:exon
so has part: feature:3784079-3784215:-1:exon
so has part: feature:3759692-3759784:-1:exon
so has part: feature:3758304-3758463:-1:exon
so has part: feature:3747414-3747492:-1:exon
so has part: feature:3727693-3728316:-1:exon
so has part: feature:3724728-3724832:-1:exon
so has part: feature:3721155-3721520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3807851-3808057:-1:exon

position:3807851:-1
position: 3807851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3796016-3796107:-1:exon

position:3796016:-1
position: 3796016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3796107:-1
position: 3796107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3792532-3792610:-1:exon

position:3792532:-1
position: 3792532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3792610:-1
position: 3792610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3784728-3784826:-1:exon

position:3784728:-1
position: 3784728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3784826:-1
position: 3784826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3784079-3784215:-1:exon

position:3784079:-1
position: 3784079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3784215:-1
position: 3784215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3759692-3759784:-1:exon

position:3759692:-1
position: 3759692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3759784:-1
position: 3759784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3758304-3758463:-1:exon

position:3758304:-1
position: 3758304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3758463:-1
position: 3758463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3747414-3747492:-1:exon

position:3747414:-1
position: 3747414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3747492:-1
position: 3747492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3727693-3728316:-1:exon

position:3727693:-1
position: 3727693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3728316:-1
position: 3728316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3724728-3724832:-1:exon

position:3724728:-1
position: 3724728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3724832:-1
position: 3724832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3721155-3721520:-1:exon

position:3721520:-1
position: 3721520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

klhdc4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: klhdc4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch domain-containing protein 4
translation: MGKKNKKDKKGKGVEKNAAKMEKKISKRSKREEEDLETLIDEFRQLDAKRTQVAEVTCPYPSPRLNASLSSHPEKDELILFGGEYFNGQKTFLYNELYLYNIKKNAWSKLEIPNPPAPRSAHQAVVVSQAGGQLWVFGGEFASPNGEQFYHYKDLWVLHLASRTWEQIKVTGGPSGRSGHRMAVCKRQILVFGGFHESTRDFVYYNDIYSFNLDKFTWTKVCPSGTAPCPRSGCQMASTLDGNNVIYGGYSKQRVKKDVEKGIVYTDMFLLKNEGKEDEDKWTWARLNPTGVKPSARSGGSLAVAPNNRIVLFGGVYDEEEEENIQGEFFNDISIYDMIKNRWFAGKLKECKGEKKKRRRGTKERETVEEANESPEPRCSTEIVKEVVTEDGTVMTVKQVLNSPDTKPITEIEEEEEEEDDDEDDSETSTSIEPCPRSSAMAAIKYGVLYIYGGMFEVGDRQFTLNDLYSIDLHKMEKWKVLVETDPKTQEWLDEEESEGEEECEGAAGGEDEEEDDDSSEEGDEHPAVQPPESYSEYLSRTESYWIKVAKDNMGQNAKEKKTLKVAQAMAKAFYDSV
SIO_010081: klhdc4
subclass of: SO_0000673
so part of: klhdc4
location: complement(join(3721351..3721520,3724728..3724832,3727693..3728316,3747414..3747492,3758304..3758463,3759692..3759784,3784079..3784215,3784728..3784826,3792532..3792610,3796016..3796107,3807851..3807949))
location: region:3721351-3807949:-1
so has part: feature:3807851-3807949:-1:exon
so has part: feature:3796016-3796107:-1:exon
so has part: feature:3792532-3792610:-1:exon
so has part: feature:3784728-3784826:-1:exon
so has part: feature:3784079-3784215:-1:exon
so has part: feature:3759692-3759784:-1:exon
so has part: feature:3758304-3758463:-1:exon
so has part: feature:3747414-3747492:-1:exon
so has part: feature:3727693-3728316:-1:exon
so has part: feature:3724728-3724832:-1:exon
so has part: feature:3721351-3721520:-1:exon

XP_032891529.1
type: Protein
SIO_000068: ncbiprotein

position:3721351:-1
position: 3721351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3807949:-1
position: 3807949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3807851-3807949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3796016-3796107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3792532-3792610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3784728-3784826:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3784079-3784215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3759692-3759784:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3758304-3758463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3747414-3747492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3727693-3728316:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3724728-3724832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3721351-3721520:-1:exon

slc7a5
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: slc7a5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3960646..4031071)
location: region:3960646-4031071:-1
so has part: feature:3960646-4031071:-1:exon
subclass of: SO_0000010

116982425
type: Gene
SIO_000068: ncbigene

position:3960646:-1
position: 3960646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4031071:-1
position: 4031071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3960646-4031071:-1:exon

slc7a5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: slc7a5
product: solute carrier family 7 member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033035639.1
SIO_010081: slc7a5
subclass of: SO_0000673
so part of: slc7a5
location: complement(join(3960646..3961373,3963598..3963775,3966486..3966635,3970574..3970670,3975366..3975469,3978000..3978123,3994751..3994795,3995685..3995790,4020268..4020393,4030248..4031071))
location: region:3960646-4031071:-1
so has part: feature:4030248-4031071:-1:exon
so has part: feature:4020268-4020393:-1:exon
so has part: feature:3995685-3995790:-1:exon
so has part: feature:3994751-3994795:-1:exon
so has part: feature:3978000-3978123:-1:exon
so has part: feature:3975366-3975469:-1:exon
so has part: feature:3970574-3970670:-1:exon
so has part: feature:3966486-3966635:-1:exon
so has part: feature:3963598-3963775:-1:exon
so has part: feature:3960646-3961373:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4030248-4031071:-1:exon

position:4030248:-1
position: 4030248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4020268-4020393:-1:exon

position:4020268:-1
position: 4020268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4020393:-1
position: 4020393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3995685-3995790:-1:exon

position:3995685:-1
position: 3995685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3995790:-1
position: 3995790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3994751-3994795:-1:exon

position:3994751:-1
position: 3994751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3994795:-1
position: 3994795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3978000-3978123:-1:exon

position:3978000:-1
position: 3978000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3978123:-1
position: 3978123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3975366-3975469:-1:exon

position:3975366:-1
position: 3975366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3975469:-1
position: 3975469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3970574-3970670:-1:exon

position:3970574:-1
position: 3970574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3970670:-1
position: 3970670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3966486-3966635:-1:exon

position:3966486:-1
position: 3966486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3966635:-1
position: 3966635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3963598-3963775:-1:exon

position:3963598:-1
position: 3963598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3963775:-1
position: 3963775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3960646-3961373:-1:exon

position:3961373:-1
position: 3961373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

slc7a5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: slc7a5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: large neutral amino acids transporter small subunit 1
translation: MSNLKKRGSGSGLVREQGEDEGQVNERMLEATVNGEPGVCRGRESPLAAAAEKPPDVALKRTITLTNGVAIIVGTIIGSGIFITPTGVVREAGSVGFSLIIWSLCGIFSTIGALCYAELGTTIMKSGGDYAYILEVYGSLVAFLKLWIELLIIRPSSQYIVALVFATYIIKPVFPSCPVPEDGAKLVACMCILFLTAVNCYSVKAATRVQDIFAAAKLLALFIIIILGFVQICKGDTPYLEPKRAFEGTTTDVGKAVLAVYSGLFAFGGWNYLNFVTEEMIEPYRNLPRAIMISMPVVTVVYVLTNLAYFTTLSPETMLHSEAVAVDFGNIHLGVMSWIVPVFVGLSCFGSVNGSLFTSSRLFFVGAREGHLPNLLSMIHPKHYTPVPSLLFTCAMTLLYAFSVDIYSVINFFSFFNWLCIALAIIGMMWLRYKKPEMERPIKFNIILPITFVLACFFLIVVSIWMTPVECSIGFAIVLSGIPVYYIGVHWKNKPAWLVNTTNSITIFSQKILEVVPQSSH
SIO_010081: slc7a5
subclass of: SO_0000673
so part of: slc7a5
location: complement(join(3961315..3961373,3963598..3963775,3966486..3966635,3970574..3970670,3975366..3975469,3978000..3978123,3994751..3994795,3995685..3995790,4020268..4020393,4030248..4030824))
location: region:3961315-4030824:-1
so has part: feature:4030248-4030824:-1:exon
so has part: feature:4020268-4020393:-1:exon
so has part: feature:3995685-3995790:-1:exon
so has part: feature:3994751-3994795:-1:exon
so has part: feature:3978000-3978123:-1:exon
so has part: feature:3975366-3975469:-1:exon
so has part: feature:3970574-3970670:-1:exon
so has part: feature:3966486-3966635:-1:exon
so has part: feature:3963598-3963775:-1:exon
so has part: feature:3961315-3961373:-1:exon

XP_032891530.1
type: Protein
SIO_000068: ncbiprotein

position:3961315:-1
position: 3961315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4030824:-1
position: 4030824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4030248-4030824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4020268-4020393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3995685-3995790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3994751-3994795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3978000-3978123:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3975366-3975469:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3970574-3970670:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3966486-3966635:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3963598-3963775:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3961315-3961373:-1:exon

ca5a
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ca5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4072512..4132731)
location: region:4072512-4132731:-1
so has part: feature:4072512-4132731:-1:exon
subclass of: SO_0000010

116982426
type: Gene
SIO_000068: ncbigene

position:4072512:-1
position: 4072512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4132731:-1
position: 4132731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4072512-4132731:-1:exon

ca5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ca5a
product: carbonic anhydrase 5A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033035643.1
SIO_010081: ca5a
subclass of: SO_0000673
so part of: ca5a
location: complement(join(4072512..4073802,4079537..4079692,4088046..4088108,4089392..4089487,4097278..4097396,4109444..4109635,4109950..4110385,4132637..4132731))
location: region:4072512-4132731:-1
so has part: feature:4132637-4132731:-1:exon
so has part: feature:4109950-4110385:-1:exon
so has part: feature:4109444-4109635:-1:exon
so has part: feature:4097278-4097396:-1:exon
so has part: feature:4089392-4089487:-1:exon
so has part: feature:4088046-4088108:-1:exon
so has part: feature:4079537-4079692:-1:exon
so has part: feature:4072512-4073802:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4132637-4132731:-1:exon

position:4132637:-1
position: 4132637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4109950-4110385:-1:exon

position:4109950:-1
position: 4109950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4110385:-1
position: 4110385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4109444-4109635:-1:exon

position:4109444:-1
position: 4109444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4109635:-1
position: 4109635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4097278-4097396:-1:exon

position:4097278:-1
position: 4097278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4097396:-1
position: 4097396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4089392-4089487:-1:exon

position:4089392:-1
position: 4089392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4089487:-1
position: 4089487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4088046-4088108:-1:exon

position:4088046:-1
position: 4088046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4088108:-1
position: 4088108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4079537-4079692:-1:exon

position:4079537:-1
position: 4079537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4079692:-1
position: 4079692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4072512-4073802:-1:exon

position:4073802:-1
position: 4073802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ca5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ca5a
product: carbonic anhydrase 5A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033035642.1
SIO_010081: ca5a
subclass of: SO_0000673
so part of: ca5a
location: complement(join(4072512..4073802,4079537..4079692,4088046..4088108,4089392..4089487,4097278..4097396,4109444..4109635,4109950..4110385,4116222..4116432,4132637..4132719))
location: region:4072512-4132719:-1
so has part: feature:4132637-4132719:-1:exon
so has part: feature:4116222-4116432:-1:exon
so has part: feature:4109950-4110385:-1:exon
so has part: feature:4109444-4109635:-1:exon
so has part: feature:4097278-4097396:-1:exon
so has part: feature:4089392-4089487:-1:exon
so has part: feature:4088046-4088108:-1:exon
so has part: feature:4079537-4079692:-1:exon
so has part: feature:4072512-4073802:-1:exon

position:4132719:-1
position: 4132719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4132637-4132719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4116222-4116432:-1:exon

position:4116222:-1
position: 4116222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4116432:-1
position: 4116432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4109950-4110385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4109444-4109635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097278-4097396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4089392-4089487:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4088046-4088108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4079537-4079692:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4072512-4073802:-1:exon

ca5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ca5a
product: carbonic anhydrase 5A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033035641.1
SIO_010081: ca5a
subclass of: SO_0000673
so part of: ca5a
location: complement(join(4072512..4073802,4079537..4079692,4088046..4088108,4089392..4089487,4097278..4097396,4109444..4109635,4109950..4110385,4131920..4132094))
location: region:4072512-4132094:-1
so has part: feature:4131920-4132094:-1:exon
so has part: feature:4109950-4110385:-1:exon
so has part: feature:4109444-4109635:-1:exon
so has part: feature:4097278-4097396:-1:exon
so has part: feature:4089392-4089487:-1:exon
so has part: feature:4088046-4088108:-1:exon
so has part: feature:4079537-4079692:-1:exon
so has part: feature:4072512-4073802:-1:exon

position:4132094:-1
position: 4132094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4131920-4132094:-1:exon

position:4131920:-1
position: 4131920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4109950-4110385:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4109444-4109635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4097278-4097396:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4089392-4089487:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4088046-4088108:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4079537-4079692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4072512-4073802:-1:exon

ca5a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ca5a
product: carbonic anhydrase 5A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033035640.1
SIO_010081: ca5a
subclass of: SO_0000673
so part of: ca5a
location: complement(join(4072512..4073802,4079537..4079692,4088046..4088108,4089392..4089487,4097278..4097396,4109444..4109635,4109950..4110397))
location: region:4072512-4110397:-1
so has part: feature:4109950-4110397:-1:exon
so has part: feature:4109444-4109635:-1:exon
so has part: feature:4097278-4097396:-1:exon
so has part: feature:4089392-4089487:-1:exon
so has part: feature:4088046-4088108:-1:exon
so has part: feature:4079537-4079692:-1:exon
so has part: feature:4072512-4073802:-1:exon

position:4110397:-1
position: 4110397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4109950-4110397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4109444-4109635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4097278-4097396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4089392-4089487:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4088046-4088108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4079537-4079692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4072512-4073802:-1:exon

ca5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ca5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 5A, mitochondrial
translation: MDYCINWLPQLQFSLDHFGSDVDLVCTESLSHHKTKMVFSFTSVLAFTKRFPIRHAWIPVRNCNLASCTHTETRKEWQNCTPVSNGARQSPIDLSSVRSVYDAQLEPLHISYDPNSCLRIRNNGYFFQVEFEDSKDSSVISKGPLKNQYRLKEFHFHWGAENDRGSEHTINNQFYPAELHLVHWNPVKYKNSDEAVLSENGLAVIGVFLKLGRRHDSLQKLVDALPAIKYKDSTVDFFNFDPISLIPSRSDYWTYPGSLTTPPLTESVTWVIMKDPIEINLEQLDVFRSLFSTSRGEQQKLMVDNYRSLQPLLKRTVYTTIPSSHENNSQQNTHS
SIO_010081: ca5a
subclass of: SO_0000673
so part of: ca5a
location: complement(join(4073644..4073802,4079537..4079692,4088046..4088108,4089392..4089487,4097278..4097396,4109444..4109635,4109950..4110172))
location: region:4073644-4110172:-1
so has part: feature:4109950-4110172:-1:exon
so has part: feature:4109444-4109635:-1:exon
so has part: feature:4097278-4097396:-1:exon
so has part: feature:4089392-4089487:-1:exon
so has part: feature:4088046-4088108:-1:exon
so has part: feature:4079537-4079692:-1:exon
so has part: feature:4073644-4073802:-1:exon

XP_032891531.1
type: Protein
SIO_000068: ncbiprotein

position:4073644:-1
position: 4073644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4110172:-1
position: 4110172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4109950-4110172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4109444-4109635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4097278-4097396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4089392-4089487:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4088046-4088108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4079537-4079692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4073644-4073802:-1:exon

ca5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ca5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 5A, mitochondrial
translation: MDYCINWLPQLQFSLDHFGSDVDLVCTESLSHHKTKMVFSFTSVLAFTKRFPIRHAWIPVRNCNLASCTHTETRKEWQNCTPVSNGARQSPIDLSSVRSVYDAQLEPLHISYDPNSCLRIRNNGYFFQVEFEDSKDSSVISKGPLKNQYRLKEFHFHWGAENDRGSEHTINNQFYPAELHLVHWNPVKYKNSDEAVLSENGLAVIGVFLKLGRRHDSLQKLVDALPAIKYKDSTVDFFNFDPISLIPSRSDYWTYPGSLTTPPLTESVTWVIMKDPIEINLEQLDVFRSLFSTSRGEQQKLMVDNYRSLQPLLKRTVYTTIPSSHENNSQQNTHS
SIO_010081: ca5a
subclass of: SO_0000673
so part of: ca5a
location: complement(join(4073644..4073802,4079537..4079692,4088046..4088108,4089392..4089487,4097278..4097396,4109444..4109635,4109950..4110172))
location: region:4073644-4110172:-1
so has part: feature:4109950-4110172:-1:exon
so has part: feature:4109444-4109635:-1:exon
so has part: feature:4097278-4097396:-1:exon
so has part: feature:4089392-4089487:-1:exon
so has part: feature:4088046-4088108:-1:exon
so has part: feature:4079537-4079692:-1:exon
so has part: feature:4073644-4073802:-1:exon

XP_032891532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4109950-4110172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4109444-4109635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4097278-4097396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4089392-4089487:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4088046-4088108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4079537-4079692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4073644-4073802:-1:exon

ca5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ca5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 5A, mitochondrial
translation: MDYCINWLPQLQFSLDHFGSDVDLVCTESLSHHKTKMVFSFTSVLAFTKRFPIRHAWIPVRNCNLASCTHTETRKEWQNCTPVSNGARQSPIDLSSVRSVYDAQLEPLHISYDPNSCLRIRNNGYFFQVEFEDSKDSSVISKGPLKNQYRLKEFHFHWGAENDRGSEHTINNQFYPAELHLVHWNPVKYKNSDEAVLSENGLAVIGVFLKLGRRHDSLQKLVDALPAIKYKDSTVDFFNFDPISLIPSRSDYWTYPGSLTTPPLTESVTWVIMKDPIEINLEQLDVFRSLFSTSRGEQQKLMVDNYRSLQPLLKRTVYTTIPSSHENNSQQNTHS
SIO_010081: ca5a
subclass of: SO_0000673
so part of: ca5a
location: complement(join(4073644..4073802,4079537..4079692,4088046..4088108,4089392..4089487,4097278..4097396,4109444..4109635,4109950..4110172))
location: region:4073644-4110172:-1
so has part: feature:4109950-4110172:-1:exon
so has part: feature:4109444-4109635:-1:exon
so has part: feature:4097278-4097396:-1:exon
so has part: feature:4089392-4089487:-1:exon
so has part: feature:4088046-4088108:-1:exon
so has part: feature:4079537-4079692:-1:exon
so has part: feature:4073644-4073802:-1:exon

XP_032891533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4109950-4110172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4109444-4109635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4097278-4097396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4089392-4089487:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4088046-4088108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4079537-4079692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4073644-4073802:-1:exon

ca5a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: ca5a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 5A, mitochondrial
translation: MDYCINWLPQLQFSLDHFGSDVDLVCTESLSHHKTKMVFSFTSVLAFTKRFPIRHAWIPVRNCNLASCTHTETRKEWQNCTPVSNGARQSPIDLSSVRSVYDAQLEPLHISYDPNSCLRIRNNGYFFQVEFEDSKDSSVISKGPLKNQYRLKEFHFHWGAENDRGSEHTINNQFYPAELHLVHWNPVKYKNSDEAVLSENGLAVIGVFLKLGRRHDSLQKLVDALPAIKYKDSTVDFFNFDPISLIPSRSDYWTYPGSLTTPPLTESVTWVIMKDPIEINLEQLDVFRSLFSTSRGEQQKLMVDNYRSLQPLLKRTVYTTIPSSHENNSQQNTHS
SIO_010081: ca5a
subclass of: SO_0000673
so part of: ca5a
location: complement(join(4073644..4073802,4079537..4079692,4088046..4088108,4089392..4089487,4097278..4097396,4109444..4109635,4109950..4110172))
location: region:4073644-4110172:-1
so has part: feature:4109950-4110172:-1:exon
so has part: feature:4109444-4109635:-1:exon
so has part: feature:4097278-4097396:-1:exon
so has part: feature:4089392-4089487:-1:exon
so has part: feature:4088046-4088108:-1:exon
so has part: feature:4079537-4079692:-1:exon
so has part: feature:4073644-4073802:-1:exon

XP_032891534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4109950-4110172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4109444-4109635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4097278-4097396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4089392-4089487:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4088046-4088108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4079537-4079692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4073644-4073802:-1:exon

LOC116982428
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4132818..4260231
location: region:4132818-4260231:1
so has part: feature:4132818-4260231:1:exon
subclass of: SO_0000010

116982428
type: Gene
SIO_000068: ncbigene

position:4132818:1
position: 4132818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4260231:1
position: 4260231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4132818-4260231:1:exon

LOC116982428
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982428
product: BTG3 associated nuclear protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033035644.1
SIO_010081: LOC116982428
subclass of: SO_0000673
so part of: LOC116982428
location: join(4132818..4132939,4153159..4153255,4158253..4158359,4167019..4167218,4176984..4177106,4186026..4186201,4208344..4208583,4214277..4214444,4215747..4215883,4219411..4219482,4225877..4225921,4254916..4255059,4259180..4260231)
location: region:4132818-4260231:1
so has part: feature:4132818-4132939:1:exon
so has part: feature:4153159-4153255:1:exon
so has part: feature:4158253-4158359:1:exon
so has part: feature:4167019-4167218:1:exon
so has part: feature:4176984-4177106:1:exon
so has part: feature:4186026-4186201:1:exon
so has part: feature:4208344-4208583:1:exon
so has part: feature:4214277-4214444:1:exon
so has part: feature:4215747-4215883:1:exon
so has part: feature:4219411-4219482:1:exon
so has part: feature:4225877-4225921:1:exon
so has part: feature:4254916-4255059:1:exon
so has part: feature:4259180-4260231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4132818-4132939:1:exon

position:4132939:1
position: 4132939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4153159-4153255:1:exon

position:4153159:1
position: 4153159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4153255:1
position: 4153255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4158253-4158359:1:exon

position:4158253:1
position: 4158253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4158359:1
position: 4158359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4167019-4167218:1:exon

position:4167019:1
position: 4167019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4167218:1
position: 4167218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4176984-4177106:1:exon

position:4176984:1
position: 4176984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4177106:1
position: 4177106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4186026-4186201:1:exon

position:4186026:1
position: 4186026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4186201:1
position: 4186201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4208344-4208583:1:exon

position:4208344:1
position: 4208344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4208583:1
position: 4208583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4214277-4214444:1:exon

position:4214277:1
position: 4214277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4214444:1
position: 4214444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4215747-4215883:1:exon

position:4215747:1
position: 4215747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4215883:1
position: 4215883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4219411-4219482:1:exon

position:4219411:1
position: 4219411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4219482:1
position: 4219482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4225877-4225921:1:exon

position:4225877:1
position: 4225877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4225921:1
position: 4225921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4254916-4255059:1:exon

position:4254916:1
position: 4254916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4255059:1
position: 4255059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4259180-4260231:1:exon

position:4259180:1
position: 4259180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116982428
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982428
product: BTG3 associated nuclear protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033035647.1
SIO_010081: LOC116982428
subclass of: SO_0000673
so part of: LOC116982428
location: join(4132818..4132939,4153159..4153255,4158253..4158359,4167019..4167218,4176984..4177106,4186026..4186201,4208344..4208583,4214277..4214444,4215747..4215883,4219420..4219482,4225877..4225921,4254916..4255059,4259180..4260231)
location: region:4132818-4260231:1
so has part: feature:4132818-4132939:1:exon
so has part: feature:4153159-4153255:1:exon
so has part: feature:4158253-4158359:1:exon
so has part: feature:4167019-4167218:1:exon
so has part: feature:4176984-4177106:1:exon
so has part: feature:4186026-4186201:1:exon
so has part: feature:4208344-4208583:1:exon
so has part: feature:4214277-4214444:1:exon
so has part: feature:4215747-4215883:1:exon
so has part: feature:4219420-4219482:1:exon
so has part: feature:4225877-4225921:1:exon
so has part: feature:4254916-4255059:1:exon
so has part: feature:4259180-4260231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4132818-4132939:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4153159-4153255:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4158253-4158359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4167019-4167218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4176984-4177106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4186026-4186201:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4208344-4208583:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4214277-4214444:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4215747-4215883:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4219420-4219482:1:exon

position:4219420:1
position: 4219420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4225877-4225921:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4254916-4255059:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4259180-4260231:1:exon

LOC116982428
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982428
product: BTG3 associated nuclear protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_033035646.1
SIO_010081: LOC116982428
subclass of: SO_0000673
so part of: LOC116982428
location: join(4132818..4132939,4153159..4153255,4158253..4158359,4167019..4167218,4176984..4177106,4186026..4186201,4208344..4208583,4214277..4214444,4215750..4215883,4219411..4219482,4225877..4225921,4254916..4255059,4259180..4260231)
location: region:4132818-4260231:1
so has part: feature:4132818-4132939:1:exon
so has part: feature:4153159-4153255:1:exon
so has part: feature:4158253-4158359:1:exon
so has part: feature:4167019-4167218:1:exon
so has part: feature:4176984-4177106:1:exon
so has part: feature:4186026-4186201:1:exon
so has part: feature:4208344-4208583:1:exon
so has part: feature:4214277-4214444:1:exon
so has part: feature:4215750-4215883:1:exon
so has part: feature:4219411-4219482:1:exon
so has part: feature:4225877-4225921:1:exon
so has part: feature:4254916-4255059:1:exon
so has part: feature:4259180-4260231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4132818-4132939:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4153159-4153255:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4158253-4158359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4167019-4167218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4176984-4177106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4186026-4186201:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4208344-4208583:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4214277-4214444:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4215750-4215883:1:exon

position:4215750:1
position: 4215750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4219411-4219482:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4225877-4225921:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4254916-4255059:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4259180-4260231:1:exon

LOC116982428
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982428
product: BTG3 associated nuclear protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033035648.1
SIO_010081: LOC116982428
subclass of: SO_0000673
so part of: LOC116982428
location: join(4132818..4132939,4153159..4153255,4158253..4158359,4167019..4167218,4176984..4177106,4186026..4186201,4208344..4208583,4214277..4214444,4215747..4215883,4219411..4219482,4225877..4225921,4254916..4255059,4255158..4255192,4259180..4259294)
location: region:4132818-4259294:1
so has part: feature:4132818-4132939:1:exon
so has part: feature:4153159-4153255:1:exon
so has part: feature:4158253-4158359:1:exon
so has part: feature:4167019-4167218:1:exon
so has part: feature:4176984-4177106:1:exon
so has part: feature:4186026-4186201:1:exon
so has part: feature:4208344-4208583:1:exon
so has part: feature:4214277-4214444:1:exon
so has part: feature:4215747-4215883:1:exon
so has part: feature:4219411-4219482:1:exon
so has part: feature:4225877-4225921:1:exon
so has part: feature:4254916-4255059:1:exon
so has part: feature:4255158-4255192:1:exon
so has part: feature:4259180-4259294:1:exon

position:4259294:1
position: 4259294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4132818-4132939:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4153159-4153255:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4158253-4158359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4167019-4167218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4176984-4177106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4186026-4186201:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4208344-4208583:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4214277-4214444:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4215747-4215883:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4219411-4219482:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4225877-4225921:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4254916-4255059:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4255158-4255192:1:exon

position:4255158:1
position: 4255158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4255192:1
position: 4255192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4259180-4259294:1:exon

LOC116982428
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BANP isoform X1
translation: MMSGQDLTDVVQIVVDDFTPDQAEVLENHQPEDGAVQPPLKRPHLEISNGQSVPDGTIKSVLFDINQAICLRLDNIEAKIQAVEATCKAIEEKIDLALNKQNSPIQVPMVAGSPLGATQTWNKVRSTVPQTTVILNSDCQNPLVSKVSAQDESILRGTDTLDNILSNSLPGKRQNTIIVKIPGLEDSHTEDVESGSETSDTVSNSGQSGGQNLAPNVTLITLNSEEDFPNGTWLGDENNPEMRVRCPITPADMQHVATNCRTAEKVALTLLDYLFHREIQAVSNLSGQGKHGKKQLDPLMIYGIRCHLFHKFGITESDWYRIKQSIDSKCRTAWRRKQRGQSLAVKGFARRTPSSSVMSGSEGGMQGSVPSSGDSQQNQAQTLHYALANAQQVHIHRIGEDGQVQQVAVQGHLHIAQVPQGEQVQITQDSEGNLQIHQVHVSQDGQVLQGAQLIAVASADHPTSGVDGSPLQGSDIQVQYVQLAPVTDHTTPAQETEALAATIQPEIQIEHEAMQSQQGEIGEAVQIQMPVNSVSS
SIO_010081: LOC116982428
subclass of: SO_0000673
so part of: LOC116982428
location: join(4153186..4153255,4158253..4158359,4167019..4167218,4176984..4177106,4186026..4186201,4208344..4208583,4214277..4214444,4215747..4215883,4219411..4219482,4225877..4225921,4254916..4255059,4259180..4259308)
location: region:4153186-4259308:1
so has part: feature:4153186-4153255:1:exon
so has part: feature:4158253-4158359:1:exon
so has part: feature:4167019-4167218:1:exon
so has part: feature:4176984-4177106:1:exon
so has part: feature:4186026-4186201:1:exon
so has part: feature:4208344-4208583:1:exon
so has part: feature:4214277-4214444:1:exon
so has part: feature:4215747-4215883:1:exon
so has part: feature:4219411-4219482:1:exon
so has part: feature:4225877-4225921:1:exon
so has part: feature:4254916-4255059:1:exon
so has part: feature:4259180-4259308:1:exon

XP_032891535.1
type: Protein
SIO_000068: ncbiprotein

position:4153186:1
position: 4153186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4259308:1
position: 4259308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4153186-4153255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4158253-4158359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4167019-4167218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4176984-4177106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4186026-4186201:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4208344-4208583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4214277-4214444:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4215747-4215883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4219411-4219482:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4225877-4225921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4254916-4255059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4259180-4259308:1:exon

LOC116982428
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BANP isoform X3
translation: MMSGQDLTDVVQIVVDDFTPDQAEVLENHQPEDGAVQPPLKRPHLEISNGQSVPDGTIKSVLFDINQAICLRLDNIEAKIQAVEATCKAIEEKIDLALNKQNSPIQVPMVAGSPLGATQTWNKVRSTVPQTTVILNSDCQNPLVSKVSAQDESILRGTDTLDNILSNSLPGKRQNTIIVKIPGLEDSHTEDVESGSETSDTVSNSGQSGGQNLAPNVTLITLNSEEDFPNGTWLGDENNPEMRVRCPITPADMQHVATNCRTAEKVALTLLDYLFHREIQAVSNLSGQGKHGKKQLDPLMIYGIRCHLFHKFGITESDWYRIKQSIDSKCRTAWRRKQRGQSLAVKGFARRTPSSSVMSGSEGGMQGSVPSSGDSQQNQAQTLHYALANAQQVHIHRIGEDGQVQQVGHLHIAQVPQGEQVQITQDSEGNLQIHQVHVSQDGQVLQGAQLIAVASADHPTSGVDGSPLQGSDIQVQYVQLAPVTDHTTPAQETEALAATIQPEIQIEHEAMQSQQGEIGEAVQIQMPVNSVSS
SIO_010081: LOC116982428
subclass of: SO_0000673
so part of: LOC116982428
location: join(4153186..4153255,4158253..4158359,4167019..4167218,4176984..4177106,4186026..4186201,4208344..4208583,4214277..4214444,4215747..4215883,4219420..4219482,4225877..4225921,4254916..4255059,4259180..4259308)
location: region:4153186-4259308:1
so has part: feature:4153186-4153255:1:exon
so has part: feature:4158253-4158359:1:exon
so has part: feature:4167019-4167218:1:exon
so has part: feature:4176984-4177106:1:exon
so has part: feature:4186026-4186201:1:exon
so has part: feature:4208344-4208583:1:exon
so has part: feature:4214277-4214444:1:exon
so has part: feature:4215747-4215883:1:exon
so has part: feature:4219420-4219482:1:exon
so has part: feature:4225877-4225921:1:exon
so has part: feature:4254916-4255059:1:exon
so has part: feature:4259180-4259308:1:exon

XP_032891538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4153186-4153255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4158253-4158359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4167019-4167218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4176984-4177106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4186026-4186201:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4208344-4208583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4214277-4214444:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4215747-4215883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4219420-4219482:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4225877-4225921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4254916-4255059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4259180-4259308:1:exon

LOC116982428
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BANP isoform X2
translation: MMSGQDLTDVVQIVVDDFTPDQAEVLENHQPEDGAVQPPLKRPHLEISNGQSVPDGTIKSVLFDINQAICLRLDNIEAKIQAVEATCKAIEEKIDLALNKQNSPIQVPMVAGSPLGATQTWNKVRSTVPQTTVILNSDCQNPLVSKVSAQDESILRGTDTLDNILSNSLPGKRQNTIIVKIPGLEDSHTEDVESGSETSDTVSNSGQSGGQNLAPNVTLITLNSEEDFPNGTWLGDENNPEMRVRCPITPADMQHVATNCRTAEKVALTLLDYLFHREIQAVSNLSGQGKHGKKQLDPLMIYGIRCHLFHKFGITESDWYRIKQSIDSKCRTAWRRKQRGQSLAVKGFARRTPSSSVMSGSGGMQGSVPSSGDSQQNQAQTLHYALANAQQVHIHRIGEDGQVQQVAVQGHLHIAQVPQGEQVQITQDSEGNLQIHQVHVSQDGQVLQGAQLIAVASADHPTSGVDGSPLQGSDIQVQYVQLAPVTDHTTPAQETEALAATIQPEIQIEHEAMQSQQGEIGEAVQIQMPVNSVSS
SIO_010081: LOC116982428
subclass of: SO_0000673
so part of: LOC116982428
location: join(4153186..4153255,4158253..4158359,4167019..4167218,4176984..4177106,4186026..4186201,4208344..4208583,4214277..4214444,4215750..4215883,4219411..4219482,4225877..4225921,4254916..4255059,4259180..4259308)
location: region:4153186-4259308:1
so has part: feature:4153186-4153255:1:exon
so has part: feature:4158253-4158359:1:exon
so has part: feature:4167019-4167218:1:exon
so has part: feature:4176984-4177106:1:exon
so has part: feature:4186026-4186201:1:exon
so has part: feature:4208344-4208583:1:exon
so has part: feature:4214277-4214444:1:exon
so has part: feature:4215750-4215883:1:exon
so has part: feature:4219411-4219482:1:exon
so has part: feature:4225877-4225921:1:exon
so has part: feature:4254916-4255059:1:exon
so has part: feature:4259180-4259308:1:exon

XP_032891537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4153186-4153255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4158253-4158359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4167019-4167218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4176984-4177106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4186026-4186201:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4208344-4208583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4214277-4214444:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4215750-4215883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4219411-4219482:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4225877-4225921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4254916-4255059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4259180-4259308:1:exon

LOC116982428
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BANP isoform X4
translation: MMSGQDLTDVVQIVVDDFTPDQAEVLENHQPEDGAVQPPLKRPHLEISNGQSVPDGTIKSVLFDINQAICLRLDNIEAKIQAVEATCKAIEEKIDLALNKQNSPIQVPMVAGSPLGATQTWNKVRSTVPQTTVILNSDCQNPLVSKVSAQDESILRGTDTLDNILSNSLPGKRQNTIIVKIPGLEDSHTEDVESGSETSDTVSNSGQSGGQNLAPNVTLITLNSEEDFPNGTWLGDENNPEMRVRCPITPADMQHVATNCRTAEKVALTLLDYLFHREIQAVSNLSGQGKHGKKQLDPLMIYGIRCHLFHKFGITESDWYRIKQSIDSKCRTAWRRKQRGQSLAVKGFARRTPSSSVMSGSEGGMQGSVPSSGDSQQNQAQTLHYALANAQQVHIHRIGEDGQVQQVAVQGHLHIAQVPQGEQVQITQDSEGNLQIHQVHVSQDGQVLQGAQLIAVASADHPTSGVDGSPLQGSDIQVQYVQLAPVTDHTTPAQPMMKG
SIO_010081: LOC116982428
subclass of: SO_0000673
so part of: LOC116982428
location: join(4153186..4153255,4158253..4158359,4167019..4167218,4176984..4177106,4186026..4186201,4208344..4208583,4214277..4214444,4215747..4215883,4219411..4219482,4225877..4225921,4254916..4255059,4255158..4255175)
location: region:4153186-4255175:1
so has part: feature:4153186-4153255:1:exon
so has part: feature:4158253-4158359:1:exon
so has part: feature:4167019-4167218:1:exon
so has part: feature:4176984-4177106:1:exon
so has part: feature:4186026-4186201:1:exon
so has part: feature:4208344-4208583:1:exon
so has part: feature:4214277-4214444:1:exon
so has part: feature:4215747-4215883:1:exon
so has part: feature:4219411-4219482:1:exon
so has part: feature:4225877-4225921:1:exon
so has part: feature:4254916-4255059:1:exon
so has part: feature:4255158-4255175:1:exon

XP_032891539.1
type: Protein
SIO_000068: ncbiprotein

position:4255175:1
position: 4255175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4153186-4153255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4158253-4158359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4167019-4167218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4176984-4177106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4186026-4186201:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4208344-4208583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4214277-4214444:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4215747-4215883:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4219411-4219482:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4225877-4225921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4254916-4255059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4255158-4255175:1:exon

LOC116982429
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982429
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4192763..4210017)
location: region:4192763-4210017:-1
so has part: feature:4192763-4210017:-1:exon
subclass of: SO_0000011

116982429
type: Gene
SIO_000068: ncbigene

position:4192763:-1
position: 4192763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4210017:-1
position: 4210017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4192763-4210017:-1:exon

LOC116982429
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116982429
product: uncharacterized LOC116982429
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004414457.1
SIO_010081: LOC116982429
subclass of: SO_0000673
so part of: LOC116982429
location: complement(join(4192763..4192840,4199354..4199356,4210007..4210017))
location: region:4192763-4210017:-1
so has part: feature:4210007-4210017:-1:exon
so has part: feature:4199354-4199356:-1:exon
so has part: feature:4192763-4192840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4210007-4210017:-1:exon

position:4210007:-1
position: 4210007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4199354-4199356:-1:exon

position:4199354:-1
position: 4199354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4199356:-1
position: 4199356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4192763-4192840:-1:exon

position:4192840:-1
position: 4192840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

znf469
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: znf469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4666615..5150869
location: region:4666615-5150869:1
so has part: feature:4666615-5150869:1:exon
subclass of: SO_0000010

116982430
type: Gene
SIO_000068: ncbigene

position:4666615:1
position: 4666615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5150869:1
position: 5150869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4666615-5150869:1:exon

znf469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: znf469
product: zinc finger protein 469, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033035649.1
SIO_010081: znf469
subclass of: SO_0000673
so part of: znf469
location: join(4666615..4666862,4812455..4812547,5073973..5074027,5142460..5150869)
location: region:4666615-5150869:1
so has part: feature:4666615-4666862:1:exon
so has part: feature:4812455-4812547:1:exon
so has part: feature:5073973-5074027:1:exon
so has part: feature:5142460-5150869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4666615-4666862:1:exon

position:4666862:1
position: 4666862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4812455-4812547:1:exon

position:4812455:1
position: 4812455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4812547:1
position: 4812547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5073973-5074027:1:exon

position:5073973:1
position: 5073973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5074027:1
position: 5074027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5142460-5150869:1:exon

position:5142460:1
position: 5142460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

znf469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: znf469
product: zinc finger protein 469, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033035650.1
SIO_010081: znf469
subclass of: SO_0000673
so part of: znf469
location: join(4812113..4812547,5073973..5074027,5142460..5150869)
location: region:4812113-5150869:1
so has part: feature:4812113-4812547:1:exon
so has part: feature:5073973-5074027:1:exon
so has part: feature:5142460-5150869:1:exon

position:4812113:1
position: 4812113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4812113-4812547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5073973-5074027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5142460-5150869:1:exon

znf469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: znf469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 469
translation: MTGDTQHVYAIKDSDTDPKLQQKDGGFEHFSEKDRRKLNSGNTSSPESCKTVLNCDSLNHSHLPRKNKDSHNQREAVIRPQQAGRIDFKSLQSKPRFLSEHTWSSSNSSSGKSSSQSPYGRNKGKEKNKRYGKGPHHLYKLNINSRSNPTIGIAYPQQKITSAKKLEGKRELITGSYRFNVPSIPEREAELQQEDLSYSRHYQEDPASHTSTSYTSNTTVVANQNQGSKTHSQGNVNISRDNANFNGKLQYPEFHGNRNNSNISPFSVDWHSPDKPFAGTNYGMSPQKQSTFPLVAESSKSNTQGFRSIPFPYPLQQLHDVPADPFNSEDSGQCHFQQEFSDVPLPNAQVAHSGYVFQLTGDGNEDSVRNGQCGTSSDGRSYTHSSHQTQFLRPSNQGTPHRVSHYKGNHPNDMNGAISSNGALPSSGAVSSNAVSSVGANEQNQSTFQENQTVCTSDAFNLHNNGIGYVSMNKKCSPLKGNRGTERTDSQGKSLRRNITQGSLPQMHFQDKVYDSPSNDSVPDGLVSFDKNISNKIHSQPRVPQAWEGNKMFSTKDYNTAPYTSVANQFSYPCQSVSNLSHADQKQPAPRNGNSRLPWQQIQLTSAMPNQNRIELSRQLTSQQLAFPLGASEWQECKKAQRNPPVCKPVTFRNKRQVNCEELQNSRNSGNGQNCNTTDAFAFRNGLDNTSTSLCDSRNPNRFCDLNPVVPASARGSSHGSLTIAKSISGSPYQSPQSSPTLNTGSTSTCSSLSPVSTVYSANSPLNTNSEESHMPTLTSASRFYHQHCHSKEDKSFTSSEHINANLLHQHHDPTRGFAYFSTDHSRGTKDNLLYIQDNSFSQQTAKIHGCADGFETESQPFPEQFFANSLSSANLDQLDVLLTCKQCDQNFNNVASFLDHRQYCGIHSGSHTELQDPTRATESRRLHAESAKGTGLHSTRGGSDPHQSLLCLSKSCDLLLDGEAASDPKDDPFKLNIFSGAGSGSVLLTASDLEIDDAKLDSLINETLNGLDYQSDNAEIDSSFIEAFADDELSTTKIAGNGMAFKMKDCMPLESKAVSKLTEAEDDQSIQIKTVYNNRQSDRHRQRKEKSRHHNRKIEKKDSTTSVLSKSYCRRVDKYSIKKCSHESSFDSLKYTKPSTKLMKLKGGRKLDTDAALHRRISEVLSQPAQNERKKCERDKHKNNGDIRDTIHSTPLKIVTVNSHSKLHRPALRDIKKRKSSNRTWSKELIHKIVQQKNKLHKLHVKSNKKLHVSLVNEQLLSHQRSSKLGEYDYVSDSDQEAEPPGSKYLTPCLNQLAKYSITREHKTKCGRMEAEESWRYIKIKKTPERGIGIEGRNRAKRYHSSRLRRRRSQSSTSSEYSNITSSSSENTNSPNSVERTDSDNEKEKNTVESKHSTFISITDRTYKAECIGPDPLIDESARTSKESSMNQAVFSRTTKEFGSAKCLFSGRGSQSTSHTMTHLYDHGGSHKMEIEEQCIVHSNPSHVELSYNEKRPQTSESFEKDLATTSNESVAPNTELTFDQRDIQKCSSCEDSIVEYSTAGINQNNLTHTTELTADMKDELVDASNKMKDSLAGSTGAYKTNVGCFHDNSSAFNIQVYDDAAQNTMNRMYSGHKDLEKQQTVAFSESLARSSSHLEDIFFCQNESSGNYLQKDHIKRFINAYPSEKCPAKMKSPVSFHTPGIFGDIPISNFNSQLYTDTLVNKENYYPFSCNGDKEGGGAAFQLQYPSFLEQKDWNLLPDMSTILPEDITHFQDLSVQSAQIKKISPTTGSSPVTTPPLLPERLDDQNGSFVVPLSDDDLEIKRLVTELENQLQAPQRNNETPVAQDGTGEYMNASLKNQTSPPSSLCLEQDKCNRQTVHAPNHPFSNGNMYMHCKGTVLNSPKVERPSSVGIIEDNEDMWTCPFQLVPLDDFQTPDKVHANPRSPDKDNQSHYPIHPEEPGNRKDDETKHSAEEESGVSPGSYSEKTEEKLENQYYTENLIANLAIMSDTVLGK…
SIO_010081: znf469
subclass of: SO_0000673
so part of: znf469
location: 5142669..5150843
location: region:5142669-5150843:1
so has part: feature:5142669-5150843:1:exon

XP_032891540.1
type: Protein
SIO_000068: ncbiprotein

position:5142669:1
position: 5142669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5150843:1
position: 5150843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5142669-5150843:1:exon

znf469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: znf469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 469
translation: MTGDTQHVYAIKDSDTDPKLQQKDGGFEHFSEKDRRKLNSGNTSSPESCKTVLNCDSLNHSHLPRKNKDSHNQREAVIRPQQAGRIDFKSLQSKPRFLSEHTWSSSNSSSGKSSSQSPYGRNKGKEKNKRYGKGPHHLYKLNINSRSNPTIGIAYPQQKITSAKKLEGKRELITGSYRFNVPSIPEREAELQQEDLSYSRHYQEDPASHTSTSYTSNTTVVANQNQGSKTHSQGNVNISRDNANFNGKLQYPEFHGNRNNSNISPFSVDWHSPDKPFAGTNYGMSPQKQSTFPLVAESSKSNTQGFRSIPFPYPLQQLHDVPADPFNSEDSGQCHFQQEFSDVPLPNAQVAHSGYVFQLTGDGNEDSVRNGQCGTSSDGRSYTHSSHQTQFLRPSNQGTPHRVSHYKGNHPNDMNGAISSNGALPSSGAVSSNAVSSVGANEQNQSTFQENQTVCTSDAFNLHNNGIGYVSMNKKCSPLKGNRGTERTDSQGKSLRRNITQGSLPQMHFQDKVYDSPSNDSVPDGLVSFDKNISNKIHSQPRVPQAWEGNKMFSTKDYNTAPYTSVANQFSYPCQSVSNLSHADQKQPAPRNGNSRLPWQQIQLTSAMPNQNRIELSRQLTSQQLAFPLGASEWQECKKAQRNPPVCKPVTFRNKRQVNCEELQNSRNSGNGQNCNTTDAFAFRNGLDNTSTSLCDSRNPNRFCDLNPVVPASARGSSHGSLTIAKSISGSPYQSPQSSPTLNTGSTSTCSSLSPVSTVYSANSPLNTNSEESHMPTLTSASRFYHQHCHSKEDKSFTSSEHINANLLHQHHDPTRGFAYFSTDHSRGTKDNLLYIQDNSFSQQTAKIHGCADGFETESQPFPEQFFANSLSSANLDQLDVLLTCKQCDQNFNNVASFLDHRQYCGIHSGSHTELQDPTRATESRRLHAESAKGTGLHSTRGGSDPHQSLLCLSKSCDLLLDGEAASDPKDDPFKLNIFSGAGSGSVLLTASDLEIDDAKLDSLINETLNGLDYQSDNAEIDSSFIEAFADDELSTTKIAGNGMAFKMKDCMPLESKAVSKLTEAEDDQSIQIKTVYNNRQSDRHRQRKEKSRHHNRKIEKKDSTTSVLSKSYCRRVDKYSIKKCSHESSFDSLKYTKPSTKLMKLKGGRKLDTDAALHRRISEVLSQPAQNERKKCERDKHKNNGDIRDTIHSTPLKIVTVNSHSKLHRPALRDIKKRKSSNRTWSKELIHKIVQQKNKLHKLHVKSNKKLHVSLVNEQLLSHQRSSKLGEYDYVSDSDQEAEPPGSKYLTPCLNQLAKYSITREHKTKCGRMEAEESWRYIKIKKTPERGIGIEGRNRAKRYHSSRLRRRRSQSSTSSEYSNITSSSSENTNSPNSVERTDSDNEKEKNTVESKHSTFISITDRTYKAECIGPDPLIDESARTSKESSMNQAVFSRTTKEFGSAKCLFSGRGSQSTSHTMTHLYDHGGSHKMEIEEQCIVHSNPSHVELSYNEKRPQTSESFEKDLATTSNESVAPNTELTFDQRDIQKCSSCEDSIVEYSTAGINQNNLTHTTELTADMKDELVDASNKMKDSLAGSTGAYKTNVGCFHDNSSAFNIQVYDDAAQNTMNRMYSGHKDLEKQQTVAFSESLARSSSHLEDIFFCQNESSGNYLQKDHIKRFINAYPSEKCPAKMKSPVSFHTPGIFGDIPISNFNSQLYTDTLVNKENYYPFSCNGDKEGGGAAFQLQYPSFLEQKDWNLLPDMSTILPEDITHFQDLSVQSAQIKKISPTTGSSPVTTPPLLPERLDDQNGSFVVPLSDDDLEIKRLVTELENQLQAPQRNNETPVAQDGTGEYMNASLKNQTSPPSSLCLEQDKCNRQTVHAPNHPFSNGNMYMHCKGTVLNSPKVERPSSVGIIEDNEDMWTCPFQLVPLDDFQTPDKVHANPRSPDKDNQSHYPIHPEEPGNRKDDETKHSAEEESGVSPGSYSEKTEEKLENQYYTENLIANLAIMSDTVLGK…
SIO_010081: znf469
subclass of: SO_0000673
so part of: znf469
location: 5142669..5150843
location: region:5142669-5150843:1
so has part: feature:5142669-5150843:1:exon

XP_032891541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5142669-5150843:1:exon

zfpm1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: zfpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5345983..5613893
location: region:5345983-5613893:1
so has part: feature:5345983-5613893:1:exon
subclass of: SO_0000010

116982431
type: Gene
SIO_000068: ncbigene

position:5345983:1
position: 5345983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5613893:1
position: 5613893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5345983-5613893:1:exon

zfpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: zfpm1
product: zinc finger protein, FOG family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033035651.1
SIO_010081: zfpm1
subclass of: SO_0000673
so part of: zfpm1
location: join(5345983..5346241,5412869..5413000,5447018..5447113,5529363..5529499,5563939..5564041,5588489..5588734,5594041..5594265,5601028..5601123,5607978..5608121,5608781..5613893)
location: region:5345983-5613893:1
so has part: feature:5345983-5346241:1:exon
so has part: feature:5412869-5413000:1:exon
so has part: feature:5447018-5447113:1:exon
so has part: feature:5529363-5529499:1:exon
so has part: feature:5563939-5564041:1:exon
so has part: feature:5588489-5588734:1:exon
so has part: feature:5594041-5594265:1:exon
so has part: feature:5601028-5601123:1:exon
so has part: feature:5607978-5608121:1:exon
so has part: feature:5608781-5613893:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5345983-5346241:1:exon

position:5346241:1
position: 5346241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5412869-5413000:1:exon

position:5412869:1
position: 5412869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5413000:1
position: 5413000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5447018-5447113:1:exon

position:5447018:1
position: 5447018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5447113:1
position: 5447113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5529363-5529499:1:exon

position:5529363:1
position: 5529363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5529499:1
position: 5529499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5563939-5564041:1:exon

position:5563939:1
position: 5563939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5564041:1
position: 5564041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5588489-5588734:1:exon

position:5588489:1
position: 5588489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5588734:1
position: 5588734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5594041-5594265:1:exon

position:5594041:1
position: 5594041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5594265:1
position: 5594265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5601028-5601123:1:exon

position:5601028:1
position: 5601028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5601123:1
position: 5601123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5607978-5608121:1:exon

position:5607978:1
position: 5607978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5608121:1
position: 5608121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5608781-5613893:1:exon

position:5608781:1
position: 5608781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

zfpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: zfpm1
product: zinc finger protein, FOG family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033035652.1
SIO_010081: zfpm1
subclass of: SO_0000673
so part of: zfpm1
location: join(5345983..5346241,5412869..5413000,5447018..5447113,5529363..5529499,5563939..5564041,5588489..5588734,5594041..5594265,5607978..5608121,5608781..5613893)
location: region:5345983-5613893:1
so has part: feature:5345983-5346241:1:exon
so has part: feature:5412869-5413000:1:exon
so has part: feature:5447018-5447113:1:exon
so has part: feature:5529363-5529499:1:exon
so has part: feature:5563939-5564041:1:exon
so has part: feature:5588489-5588734:1:exon
so has part: feature:5594041-5594265:1:exon
so has part: feature:5607978-5608121:1:exon
so has part: feature:5608781-5613893:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5345983-5346241:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5412869-5413000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5447018-5447113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5529363-5529499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5563939-5564041:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5588489-5588734:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5594041-5594265:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5607978-5608121:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5608781-5613893:1:exon

zfpm1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: zfpm1
product: zinc finger protein, FOG family member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033035653.1
SIO_010081: zfpm1
subclass of: SO_0000673
so part of: zfpm1
location: join(5345983..5346241,5412869..5413000,5447018..5447113,5529363..5529499,5563939..5564041,5588489..5588734,5594041..5594265,5608781..5613893)
location: region:5345983-5613893:1
so has part: feature:5345983-5346241:1:exon
so has part: feature:5412869-5413000:1:exon
so has part: feature:5447018-5447113:1:exon
so has part: feature:5529363-5529499:1:exon
so has part: feature:5563939-5564041:1:exon
so has part: feature:5588489-5588734:1:exon
so has part: feature:5594041-5594265:1:exon
so has part: feature:5608781-5613893:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5345983-5346241:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5412869-5413000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5447018-5447113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5529363-5529499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5563939-5564041:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5588489-5588734:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5594041-5594265:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5608781-5613893:1:exon

zfpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: zfpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZFPM1 isoform X1
translation: MSRRKQSNPRQIKRSVDEMEKGEENLTDDNNMSERETVASNHDESADCDTSSSFYSEDQWLQDIPKSPEELEVKWPSDEQKNPEMCHMPESLELHHVDSEMQVRACHSLAKGLSWGPYDGSINSSNKHTQESDKMSVTASLQLKEEQYWLRQLKTTANEESANCIIYCKDDQIWCKTTKPIMEGECLTAIVGAMEQSSQYPVLNLSVKVERVEAAECSEPAATYPASLHSDIQLLPQQAGMAAILATAVVNKDIFPCKSCGIWYRSERNLQAHLMYYCASRLKSTAAPKEEKPKEPAAHERICPFPQCNKTCPSASSLEIHARSHSGERPFVCLICLSAFTTKANCERHLKVHTDTLNGVCHGCGFVSSTRDILYSHLVTNHMVCQPGSKSEPHSPGTGLPALPLTPVKVTSPFLNLKCNQCDYIGDSESSLQQHTSLHVIQDAFQCSHCDEKLKNSAELVKHMEIHKGKELQRNMEEAKETDVRGSPSLNRDIPEDINVMVIVKEEPLNLKSDVDVERTVERQTDPSPDCSSSGVSPRSTLLVKVKSEHSSPTPASSPVHSGTGSVLSEGTVLIPYMFNHETSSFPQASEILAKMSELVHSRLKQGVNNYPILYAGAPIQKGATCYECDITFNNINNYLVHKRLYCSSRHQQADNPAVDETSKDSASVNRTEQVSHCPSSVMENQPASSSSQTDSERDLRIPPVENKAPEIKTEDGVLKDTSSEGESLSRVSEGSRSPSNSGEDFDLDPSKTVCEACNIRFTRHETYAVHKRLYCASRHDPPLRRPNGGKAAVLQQTVRTRKRRKLYEIHAPGHQSLPPPSPSEAPAHSPVAGTVQNAGASNNMETVKIKQETLSVSSRSTDSLSLSTGYMLTTQSSSTSSPGSSSDVDGPIDLSKKSRFQEEPSTPAAPVLPTLRFSTDYHECTSCKISFNSVQNYLTHKKYYCSATALQHNKVDHLARVKMQSPASVKAKKNRMDISDPHLQAEELKKKEISTKCTPESPTLVHASTTPSNSPGRYHCSPDALPAGSQQSSHIKTFSAAKRTHTIICPYCPFTGTIEGDLIEHFKNAHDLSLTKQLSPGYTVEVTMEDVLPQGKPMTNSISESSPQNSRVPALSPKSGAQIQKNIPNAKDQSESVSSQSSVESPLQNISPKPLIMPSPNVALKISPVPDSSRDLGFKSLSPPNNVDKSVQTAMSLPSPVQNGNHRFCRLCNIKFSSLSTFIAHKKYYCSSHTAEHVK
SIO_010081: zfpm1
subclass of: SO_0000673
so part of: zfpm1
location: join(5346202..5346241,5412869..5413000,5447018..5447113,5529363..5529499,5563939..5564041,5588489..5588734,5594041..5594265,5601028..5601123,5607978..5608121,5608781..5611284)
location: region:5346202-5611284:1
so has part: feature:5346202-5346241:1:exon
so has part: feature:5412869-5413000:1:exon
so has part: feature:5447018-5447113:1:exon
so has part: feature:5529363-5529499:1:exon
so has part: feature:5563939-5564041:1:exon
so has part: feature:5588489-5588734:1:exon
so has part: feature:5594041-5594265:1:exon
so has part: feature:5601028-5601123:1:exon
so has part: feature:5607978-5608121:1:exon
so has part: feature:5608781-5611284:1:exon

XP_032891542.1
type: Protein
SIO_000068: ncbiprotein

position:5346202:1
position: 5346202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5611284:1
position: 5611284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5346202-5346241:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5412869-5413000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5447018-5447113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5529363-5529499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5563939-5564041:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5588489-5588734:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5594041-5594265:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5601028-5601123:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5607978-5608121:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5608781-5611284:1:exon

zfpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: zfpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZFPM1 isoform X2
translation: MSRRKQSNPRQIKRSVDEMEKGEENLTDDNNMSERETVASNHDESADCDTSSSFYSEDQWLQDIPKSPEELEVKWPSDEQKNPEMCHMPESLELHHVDSEMQVRACHSLAKGLSWGPYDGSINSSNKHTQESDKMSVTASLQLKEEQYWLRQLKTTANEESANCIIYCKDDQIWCKTTKPIMEGECLTAIVGAMEQSSQYPVLNLSVKVERVEAAECSEPAATYPASLHSDIQLLPQQAGMAAILATAVVNKDIFPCKSCGIWYRSERNLQAHLMYYCASRLKSTAAPKEEKPKEPAAHERICPFPQCNKTCPSASSLEIHARSHSGVCHGCGFVSSTRDILYSHLVTNHMVCQPGSKSEPHSPGTGLPALPLTPVKVTSPFLNLKCNQCDYIGDSESSLQQHTSLHVIQDAFQCSHCDEKLKNSAELVKHMEIHKGKELQRNMEEAKETDVRGSPSLNRDIPEDINVMVIVKEEPLNLKSDVDVERTVERQTDPSPDCSSSGVSPRSTLLVKVKSEHSSPTPASSPVHSGTGSVLSEGTVLIPYMFNHETSSFPQASEILAKMSELVHSRLKQGVNNYPILYAGAPIQKGATCYECDITFNNINNYLVHKRLYCSSRHQQADNPAVDETSKDSASVNRTEQVSHCPSSVMENQPASSSSQTDSERDLRIPPVENKAPEIKTEDGVLKDTSSEGESLSRVSEGSRSPSNSGEDFDLDPSKTVCEACNIRFTRHETYAVHKRLYCASRHDPPLRRPNGGKAAVLQQTVRTRKRRKLYEIHAPGHQSLPPPSPSEAPAHSPVAGTVQNAGASNNMETVKIKQETLSVSSRSTDSLSLSTGYMLTTQSSSTSSPGSSSDVDGPIDLSKKSRFQEEPSTPAAPVLPTLRFSTDYHECTSCKISFNSVQNYLTHKKYYCSATALQHNKVDHLARVKMQSPASVKAKKNRMDISDPHLQAEELKKKEISTKCTPESPTLVHASTTPSNSPGRYHCSPDALPAGSQQSSHIKTFSAAKRTHTIICPYCPFTGTIEGDLIEHFKNAHDLSLTKQLSPGYTVEVTMEDVLPQGKPMTNSISESSPQNSRVPALSPKSGAQIQKNIPNAKDQSESVSSQSSVESPLQNISPKPLIMPSPNVALKISPVPDSSRDLGFKSLSPPNNVDKSVQTAMSLPSPVQNGNHRFCRLCNIKFSSLSTFIAHKKYYCSSHTAEHVK
SIO_010081: zfpm1
subclass of: SO_0000673
so part of: zfpm1
location: join(5346202..5346241,5412869..5413000,5447018..5447113,5529363..5529499,5563939..5564041,5588489..5588734,5594041..5594265,5607978..5608121,5608781..5611284)
location: region:5346202-5611284:1
so has part: feature:5346202-5346241:1:exon
so has part: feature:5412869-5413000:1:exon
so has part: feature:5447018-5447113:1:exon
so has part: feature:5529363-5529499:1:exon
so has part: feature:5563939-5564041:1:exon
so has part: feature:5588489-5588734:1:exon
so has part: feature:5594041-5594265:1:exon
so has part: feature:5607978-5608121:1:exon
so has part: feature:5608781-5611284:1:exon

XP_032891543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5346202-5346241:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5412869-5413000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5447018-5447113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5529363-5529499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5563939-5564041:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5588489-5588734:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5594041-5594265:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5607978-5608121:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5608781-5611284:1:exon

zfpm1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: zfpm1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZFPM1 isoform X3
translation: MSRRKQSNPRQIKRSVDEMEKGEENLTDDNNMSERETVASNHDESADCDTSSSFYSEDQWLQDIPKSPEELEVKWPSDEQKNPEMCHMPESLELHHVDSEMQVRACHSLAKGLSWGPYDGSINSSNKHTQESDKMSVTASLQLKEEQYWLRQLKTTANEESANCIIYCKDDQIWCKTTKPIMEGECLTAIVGAMEQSSQYPVLNLSVKVERVEAAECSEPAATYPASLHSDIQLLPQQAGMAAILATAVVNKDIFPCKSCGIWYRSERNLQAHLMYYCASRLKSTAAPKEEKPKEPAAHERICPFPQCNKTCPSASSLEIHARSHSAVKVTSPFLNLKCNQCDYIGDSESSLQQHTSLHVIQDAFQCSHCDEKLKNSAELVKHMEIHKGKELQRNMEEAKETDVRGSPSLNRDIPEDINVMVIVKEEPLNLKSDVDVERTVERQTDPSPDCSSSGVSPRSTLLVKVKSEHSSPTPASSPVHSGTGSVLSEGTVLIPYMFNHETSSFPQASEILAKMSELVHSRLKQGVNNYPILYAGAPIQKGATCYECDITFNNINNYLVHKRLYCSSRHQQADNPAVDETSKDSASVNRTEQVSHCPSSVMENQPASSSSQTDSERDLRIPPVENKAPEIKTEDGVLKDTSSEGESLSRVSEGSRSPSNSGEDFDLDPSKTVCEACNIRFTRHETYAVHKRLYCASRHDPPLRRPNGGKAAVLQQTVRTRKRRKLYEIHAPGHQSLPPPSPSEAPAHSPVAGTVQNAGASNNMETVKIKQETLSVSSRSTDSLSLSTGYMLTTQSSSTSSPGSSSDVDGPIDLSKKSRFQEEPSTPAAPVLPTLRFSTDYHECTSCKISFNSVQNYLTHKKYYCSATALQHNKVDHLARVKMQSPASVKAKKNRMDISDPHLQAEELKKKEISTKCTPESPTLVHASTTPSNSPGRYHCSPDALPAGSQQSSHIKTFSAAKRTHTIICPYCPFTGTIEGDLIEHFKNAHDLSLTKQLSPGYTVEVTMEDVLPQGKPMTNSISESSPQNSRVPALSPKSGAQIQKNIPNAKDQSESVSSQSSVESPLQNISPKPLIMPSPNVALKISPVPDSSRDLGFKSLSPPNNVDKSVQTAMSLPSPVQNGNHRFCRLCNIKFSSLSTFIAHKKYYCSSHTAEHVK
SIO_010081: zfpm1
subclass of: SO_0000673
so part of: zfpm1
location: join(5346202..5346241,5412869..5413000,5447018..5447113,5529363..5529499,5563939..5564041,5588489..5588734,5594041..5594265,5608781..5611284)
location: region:5346202-5611284:1
so has part: feature:5346202-5346241:1:exon
so has part: feature:5412869-5413000:1:exon
so has part: feature:5447018-5447113:1:exon
so has part: feature:5529363-5529499:1:exon
so has part: feature:5563939-5564041:1:exon
so has part: feature:5588489-5588734:1:exon
so has part: feature:5594041-5594265:1:exon
so has part: feature:5608781-5611284:1:exon

XP_032891544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5346202-5346241:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5412869-5413000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5447018-5447113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5529363-5529499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5563939-5564041:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5588489-5588734:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5594041-5594265:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5608781-5611284:1:exon

LOC116982967
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5848045..5865083)
location: region:5848045-5865083:-1
so has part: feature:5848045-5865083:-1:exon
subclass of: SO_0000010

116982967
type: Gene
SIO_000068: ncbigene

position:5848045:-1
position: 5848045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5865083:-1
position: 5865083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5848045-5865083:-1:exon

LOC116982967
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982967
product: thyrotropin-releasing hormone receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033036500.1
SIO_010081: LOC116982967
subclass of: SO_0000673
so part of: LOC116982967
location: complement(join(5848045..5848707,5849029..5849217,5849331..5849469,5860482..5860885,5864282..5865083))
location: region:5848045-5865083:-1
so has part: feature:5864282-5865083:-1:exon
so has part: feature:5860482-5860885:-1:exon
so has part: feature:5849331-5849469:-1:exon
so has part: feature:5849029-5849217:-1:exon
so has part: feature:5848045-5848707:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5864282-5865083:-1:exon

position:5864282:-1
position: 5864282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5860482-5860885:-1:exon

position:5860482:-1
position: 5860482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5860885:-1
position: 5860885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5849331-5849469:-1:exon

position:5849331:-1
position: 5849331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5849469:-1
position: 5849469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5849029-5849217:-1:exon

position:5849029:-1
position: 5849029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5849217:-1
position: 5849217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5848045-5848707:-1:exon

position:5848707:-1
position: 5848707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116982967
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin-releasing hormone receptor-like
translation: MRNVSTFLIATNTSLASPASVGTDSAYKSTEYKAVSVLLVLTICGTGIIGNVMVVLVVLTGRHMRTPTNYYLLSLAVADLMVLVAAGLPNISDSLIEQWIYGHVGCLGITYLQYLGINASSCSITAFTVERYIAICHPMKAQSICTVSRAKKIIAFLWFITSFYCMLWFFLVDLNIDSRQNVACGYKVSRNLYLPIYFIDFAIFYVIPLIVATVLYGLIGRVLFLSPMPKQVNTGPEQWRPHHAPEQIGSHSASWTSKGSISCRKQVTKMLAVIVILFALLWMPYRTIVVVNSFMDKQYENIWFLLFCRLCIYTNSAINPVIYNLMSQKFRSAFKKLCNCSQDDTRHRLLYTTRLNYSSVKDAIKGKPEVNGKQHSVKKNDQEKDNNIKMEDVTLAAPDQNGAAPRHGVVHHIPTVGPPVHARARRLPPDKLRIARDEYQLMEDMGIDFSAHLEGAAFFSKVDLVRGYNPMHPDDVPKTATITPFGLFEWLGMPFGLKNPARAFQRLMDQLLPLCVPCSGAWRANRGTSRGPRRRTRLSRVPRELTLPCWCTRALPPPPRQLRPPECNYSAFDRELLVLDLALQHFRYFLEGRVLTAFMDHKPLTFTLGKIADPWPARQNSEFTIDVRHVAGKLNVIADALPCPAIPSVLALDHGIDYSELAATQRADAGTDKYRTAVAPCGAVGIMVLCDVSTGRARPIAPVSWRRRVFDAVHGLAHPSIRATFALVAA
SIO_010081: LOC116982967
subclass of: SO_0000673
so part of: LOC116982967
location: complement(join(5848045..5848707,5849029..5849217,5849331..5849469,5860482..5860885,5864282..5865079))
location: region:5848045-5865079:-1
so has part: feature:5864282-5865079:-1:exon
so has part: feature:5860482-5860885:-1:exon
so has part: feature:5849331-5849469:-1:exon
so has part: feature:5849029-5849217:-1:exon
so has part: feature:5848045-5848707:-1:exon

XP_032892391.1
type: Protein
SIO_000068: ncbiprotein

position:5865079:-1
position: 5865079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5864282-5865079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5860482-5860885:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5849331-5849469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5849029-5849217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5848045-5848707:-1:exon

map1lc3b
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: map1lc3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5895953..5911638)
location: region:5895953-5911638:-1
so has part: feature:5895953-5911638:-1:exon
subclass of: SO_0000010

116982433
type: Gene
SIO_000068: ncbigene

position:5895953:-1
position: 5895953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5911638:-1
position: 5911638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5895953-5911638:-1:exon

map1lc3b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: map1lc3b
product: microtubule associated protein 1 light chain 3 beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_033035654.1
SIO_010081: map1lc3b
subclass of: SO_0000673
so part of: map1lc3b
location: complement(join(5895953..5898359,5900307..5900413,5901913..5901968,5911406..5911638))
location: region:5895953-5911638:-1
so has part: feature:5911406-5911638:-1:exon
so has part: feature:5901913-5901968:-1:exon
so has part: feature:5900307-5900413:-1:exon
so has part: feature:5895953-5898359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5911406-5911638:-1:exon

position:5911406:-1
position: 5911406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5901913-5901968:-1:exon

position:5901913:-1
position: 5901913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5901968:-1
position: 5901968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5900307-5900413:-1:exon

position:5900307:-1
position: 5900307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5900413:-1
position: 5900413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5895953-5898359:-1:exon

position:5898359:-1
position: 5898359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

map1lc3b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: map1lc3b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated proteins 1A/1B light chain 3B
translation: MPSEKSFKQRRTFEQRVEDVRLIREQHPNKIPVIIERYKGEKQLPLLDKTKFLVPDHVNMSELIKIIRRRLQLNSNQAFFLLVNGHSMVSVSTPISEVYEREKDEDGFLYMVYASQETFGMDTAL
SIO_010081: map1lc3b
subclass of: SO_0000673
so part of: map1lc3b
location: complement(join(5898185..5898359,5900307..5900413,5901913..5901968,5911406..5911445))
location: region:5898185-5911445:-1
so has part: feature:5911406-5911445:-1:exon
so has part: feature:5901913-5901968:-1:exon
so has part: feature:5900307-5900413:-1:exon
so has part: feature:5898185-5898359:-1:exon

XP_032891545.1
type: Protein
SIO_000068: ncbiprotein

position:5898185:-1
position: 5898185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5911445:-1
position: 5911445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5911406-5911445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5901913-5901968:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5900307-5900413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5898185-5898359:-1:exon

tcf25
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: tcf25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5938099..5999162)
location: region:5938099-5999162:-1
so has part: feature:5938099-5999162:-1:exon
subclass of: SO_0000010

116982968
type: Gene
SIO_000068: ncbigene

position:5938099:-1
position: 5938099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5999162:-1
position: 5999162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5938099-5999162:-1:exon

tcf25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: tcf25
product: transcription factor 25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033036501.1
SIO_010081: tcf25
subclass of: SO_0000673
so part of: tcf25
location: complement(join(5938099..5938380,5942172..5942244,5945545..5945624,5947109..5947196,5957110..5957265,5962443..5962530,5968634..5968793,5969713..5969818,5970649..5970741,5977898..5977991,5980979..5981078,5981649..5981779,5983576..5983658,5984277..5984342,5987346..5987464,5989625..5989699,5991217..5991411,5997276..5997673,5997765..5997990,5999097..5999162))
location: region:5938099-5999162:-1
so has part: feature:5999097-5999162:-1:exon
so has part: feature:5997765-5997990:-1:exon
so has part: feature:5997276-5997673:-1:exon
so has part: feature:5991217-5991411:-1:exon
so has part: feature:5989625-5989699:-1:exon
so has part: feature:5987346-5987464:-1:exon
so has part: feature:5984277-5984342:-1:exon
so has part: feature:5983576-5983658:-1:exon
so has part: feature:5981649-5981779:-1:exon
so has part: feature:5980979-5981078:-1:exon
so has part: feature:5977898-5977991:-1:exon
so has part: feature:5970649-5970741:-1:exon
so has part: feature:5969713-5969818:-1:exon
so has part: feature:5968634-5968793:-1:exon
so has part: feature:5962443-5962530:-1:exon
so has part: feature:5957110-5957265:-1:exon
so has part: feature:5947109-5947196:-1:exon
so has part: feature:5945545-5945624:-1:exon
so has part: feature:5942172-5942244:-1:exon
so has part: feature:5938099-5938380:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5999097-5999162:-1:exon

position:5999097:-1
position: 5999097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5997765-5997990:-1:exon

position:5997765:-1
position: 5997765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5997990:-1
position: 5997990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5997276-5997673:-1:exon

position:5997276:-1
position: 5997276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5997673:-1
position: 5997673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5991217-5991411:-1:exon

position:5991217:-1
position: 5991217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5991411:-1
position: 5991411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5989625-5989699:-1:exon

position:5989625:-1
position: 5989625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5989699:-1
position: 5989699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5987346-5987464:-1:exon

position:5987346:-1
position: 5987346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5987464:-1
position: 5987464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5984277-5984342:-1:exon

position:5984277:-1
position: 5984277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5984342:-1
position: 5984342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5983576-5983658:-1:exon

position:5983576:-1
position: 5983576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5983658:-1
position: 5983658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5981649-5981779:-1:exon

position:5981649:-1
position: 5981649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5981779:-1
position: 5981779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5980979-5981078:-1:exon

position:5980979:-1
position: 5980979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5981078:-1
position: 5981078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5977898-5977991:-1:exon

position:5977898:-1
position: 5977898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5977991:-1
position: 5977991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5970649-5970741:-1:exon

position:5970649:-1
position: 5970649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5970741:-1
position: 5970741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5969713-5969818:-1:exon

position:5969713:-1
position: 5969713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5969818:-1
position: 5969818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5968634-5968793:-1:exon

position:5968634:-1
position: 5968634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5968793:-1
position: 5968793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5962443-5962530:-1:exon

position:5962443:-1
position: 5962443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5962530:-1
position: 5962530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5957110-5957265:-1:exon

position:5957110:-1
position: 5957110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5957265:-1
position: 5957265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5947109-5947196:-1:exon

position:5947109:-1
position: 5947109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5947196:-1
position: 5947196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5945545-5945624:-1:exon

position:5945545:-1
position: 5945545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5945624:-1
position: 5945624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5942172-5942244:-1:exon

position:5942172:-1
position: 5942172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5942244:-1
position: 5942244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5938099-5938380:-1:exon

position:5938380:-1
position: 5938380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tcf25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: tcf25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor 25
translation: MVKLPVHQQTMKNLPGRGWEREHQHQHQLSAANRLPRPFRGAGDGALRPPSPLTSAGGAGPKIHKPRLPVNPGPGSRSLQAPAPGNSRPRQLQAPAPGSGPTHPAPLSPGHQDDSTPRSRPSLPPLPPGVTCDNSSASPGHWPRPARPAPASTSRARAPSPRATMSSRSLRKLRGERVQEPLSLPVEQRQGQEEENDEEQEDEEPLELPPLRKQRRRKRPKAAAGDPQPAQLNEVNVENDETLEEHPTDEPSSINLTLKDSLTEEDDQTEATLDAENEEPETKNDELENKPDTLQTNSSNKPKRKKKKKKNRNNTPADAQESVADDIDSILREIQGPNEFHHQSHSHSTETRPLMYVEHRNLNPETELKRYFGARAVLGEQRLRQRHRQMHRSTWLITPKDGWPRYTKTGISMQLLETKGGAQYFTFEHSRDYQQAQFKFLDAVNSMDPNNILALLHVNPHHIDSLLQLSDICRMQEDQEMARDLIEKAIYCFESAFHPAFSLTSGKSRLDYRRPENRSFFLALYRHMMFLEKRGCPRTALEFCKLIRGLDPETEPLCALLMVDFMALRAREYSFLIRLYEEWKFHLNLSQLPNFAFSVPLAYYYISQRENLSDIERTQNIERANRLIQNALIVFPSVLMQLLDKCSVQADQAVLSHTFFGYEVQIRQPSALKQLVALFIGRNWMLWKDAGIITWLEENVKEVLRRVDAKDPLVESENKRNRYQNVPRNIYRHIILSEIKEAIATLPPEVTAQPVMGYDPLPPLDGIITYTRPERVNQAAGGNTLSLFFRSLLPNFNLQEDRRQQVEGEGAEEQHELNQGVNRLMAAMRDMLANIRFQEPPQEEYQDGDGDGDGEWD
SIO_010081: tcf25
subclass of: SO_0000673
so part of: tcf25
location: complement(join(5938204..5938380,5942172..5942244,5945545..5945624,5947109..5947196,5957110..5957265,5962443..5962530,5968634..5968793,5969713..5969818,5970649..5970741,5977898..5977991,5980979..5981078,5981649..5981779,5983576..5983658,5984277..5984342,5987346..5987464,5989625..5989699,5991217..5991411,5997276..5997673,5997765..5997990,5999097..5999162))
location: region:5938204-5999162:-1
so has part: feature:5999097-5999162:-1:exon
so has part: feature:5997765-5997990:-1:exon
so has part: feature:5997276-5997673:-1:exon
so has part: feature:5991217-5991411:-1:exon
so has part: feature:5989625-5989699:-1:exon
so has part: feature:5987346-5987464:-1:exon
so has part: feature:5984277-5984342:-1:exon
so has part: feature:5983576-5983658:-1:exon
so has part: feature:5981649-5981779:-1:exon
so has part: feature:5980979-5981078:-1:exon
so has part: feature:5977898-5977991:-1:exon
so has part: feature:5970649-5970741:-1:exon
so has part: feature:5969713-5969818:-1:exon
so has part: feature:5968634-5968793:-1:exon
so has part: feature:5962443-5962530:-1:exon
so has part: feature:5957110-5957265:-1:exon
so has part: feature:5947109-5947196:-1:exon
so has part: feature:5945545-5945624:-1:exon
so has part: feature:5942172-5942244:-1:exon
so has part: feature:5938204-5938380:-1:exon

XP_032892392.1
type: Protein
SIO_000068: ncbiprotein

position:5938204:-1
position: 5938204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5999097-5999162:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5997765-5997990:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5997276-5997673:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5991217-5991411:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5989625-5989699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5987346-5987464:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5984277-5984342:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5983576-5983658:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5981649-5981779:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5980979-5981078:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5977898-5977991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5970649-5970741:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5969713-5969818:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5968634-5968793:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5962443-5962530:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5957110-5957265:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5947109-5947196:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5945545-5945624:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5942172-5942244:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5938204-5938380:-1:exon

LOC116983003
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116983003
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(5963389..5963518)
location: region:5963389-5963518:-1
so has part: feature:5963389-5963518:-1:exon

116983003
type: Gene
SIO_000068: ncbigene

position:5963389:-1
position: 5963389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5963518:-1
position: 5963518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5963389-5963518:-1:exon

LOC116983003
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116983003
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116983003
subclass of: SO_0000673
so part of: LOC116983003
location: complement(5963389..5963518)
location: region:5963389-5963518:-1
so has part: feature:5963389-5963518:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5963389-5963518:-1:exon

gstp1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: gstp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6016505..6025796
location: region:6016505-6025796:1
so has part: feature:6016505-6025796:1:exon
subclass of: SO_0000010

116982434
type: Gene
SIO_000068: ncbigene

position:6016505:1
position: 6016505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6025796:1
position: 6025796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6016505-6025796:1:exon

gstp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gstp1
product: glutathione S-transferase pi 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033035656.1
SIO_010081: gstp1
subclass of: SO_0000673
so part of: gstp1
location: join(6016505..6016616,6022286..6022321,6022489..6022589,6022849..6022936,6023027..6023130,6024201..6024308,6025404..6025615,6025701..6025796)
location: region:6016505-6025796:1
so has part: feature:6016505-6016616:1:exon
so has part: feature:6022286-6022321:1:exon
so has part: feature:6022489-6022589:1:exon
so has part: feature:6022849-6022936:1:exon
so has part: feature:6023027-6023130:1:exon
so has part: feature:6024201-6024308:1:exon
so has part: feature:6025404-6025615:1:exon
so has part: feature:6025701-6025796:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6016505-6016616:1:exon

position:6016616:1
position: 6016616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6022286-6022321:1:exon

position:6022286:1
position: 6022286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6022321:1
position: 6022321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6022489-6022589:1:exon

position:6022489:1
position: 6022489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6022589:1
position: 6022589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6022849-6022936:1:exon

position:6022849:1
position: 6022849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6022936:1
position: 6022936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6023027-6023130:1:exon

position:6023027:1
position: 6023027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6023130:1
position: 6023130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6024201-6024308:1:exon

position:6024201:1
position: 6024201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6024308:1
position: 6024308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6025404-6025615:1:exon

position:6025404:1
position: 6025404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6025615:1
position: 6025615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6025701-6025796:1:exon

position:6025701:1
position: 6025701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

gstp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gstp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione S-transferase P isoform X2
translation: MPGYTITYFPVRGRCSAMRMLLADQGEAWSEEIVTSENWLGMKDSCVFGQLPKFQDGDFVLFQSNAVLRYLGRKYGLYGNNLKESAMIDMFNDGVEDLRLKYVILIYKDYETGKDKFVKSLPDELKWFEKILENNNKGQKFIHGDQISFADYNLVDLLGNLEILAPGCLKKTPLIAAYNERVKSRPNLQAYLQSDAHRKLPINGNGKQ
SIO_010081: gstp1
subclass of: SO_0000673
so part of: gstp1
location: join(6016616,6022286..6022321,6022489..6022589,6022849..6022936,6023027..6023130,6024201..6024308,6025404..6025592)
location: region:6016616-6025592:1
so has part: feature:6016616-6016616:1:exon
so has part: feature:6022286-6022321:1:exon
so has part: feature:6022489-6022589:1:exon
so has part: feature:6022849-6022936:1:exon
so has part: feature:6023027-6023130:1:exon
so has part: feature:6024201-6024308:1:exon
so has part: feature:6025404-6025592:1:exon

XP_032891547.1
type: Protein
SIO_000068: ncbiprotein

position:6025592:1
position: 6025592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6016616-6016616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6022286-6022321:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6022489-6022589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6022849-6022936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6023027-6023130:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6024201-6024308:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6025404-6025592:1:exon

gstp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: gstp1
product: glutathione S-transferase pi 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033035655.1
SIO_010081: gstp1
subclass of: SO_0000673
so part of: gstp1
location: join(6016687..6016690,6020941..6020990,6022286..6022321,6022489..6022589,6022849..6022936,6023027..6023130,6024201..6024308,6025404..6025615,6025701..6025796)
location: region:6016687-6025796:1
so has part: feature:6016687-6016690:1:exon
so has part: feature:6020941-6020990:1:exon
so has part: feature:6022286-6022321:1:exon
so has part: feature:6022489-6022589:1:exon
so has part: feature:6022849-6022936:1:exon
so has part: feature:6023027-6023130:1:exon
so has part: feature:6024201-6024308:1:exon
so has part: feature:6025404-6025615:1:exon
so has part: feature:6025701-6025796:1:exon

position:6016687:1
position: 6016687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6016687-6016690:1:exon

position:6016690:1
position: 6016690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6020941-6020990:1:exon

position:6020941:1
position: 6020941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6020990:1
position: 6020990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6022286-6022321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6022489-6022589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6022849-6022936:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6023027-6023130:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6024201-6024308:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6025404-6025615:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6025701-6025796:1:exon

gstp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: gstp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione S-transferase P isoform X1
translation: MPGYTITYFPVRGRCSAMRMLLADQGEAWSEEIVTSENWLGMKDSCVFGQLPKFQDGDFVLFQSNAVLRYLGRKYGLYGNNLKESAMIDMFNDGVEDLRLKYVILIYKDYETGKDKFVKSLPDELKWFEKILENNNKGQKFIHGDQISFADYNLVDLLGNLEILAPGCLKKTPLIAAYNERVKSRPNLQAYLQSDAHRKLPINGNGKQ
SIO_010081: gstp1
subclass of: SO_0000673
so part of: gstp1
location: join(6020990,6022286..6022321,6022489..6022589,6022849..6022936,6023027..6023130,6024201..6024308,6025404..6025592)
location: region:6020990-6025592:1
so has part: feature:6020990-6020990:1:exon
so has part: feature:6022286-6022321:1:exon
so has part: feature:6022489-6022589:1:exon
so has part: feature:6022849-6022936:1:exon
so has part: feature:6023027-6023130:1:exon
so has part: feature:6024201-6024308:1:exon
so has part: feature:6025404-6025592:1:exon

XP_032891546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6020990-6020990:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6022286-6022321:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6022489-6022589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6022849-6022936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6023027-6023130:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6024201-6024308:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6025404-6025592:1:exon

spire2
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: spire2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6067951..6191686)
location: region:6067951-6191686:-1
so has part: feature:6067951-6191686:-1:exon
subclass of: SO_0000010

116982435
type: Gene
SIO_000068: ncbigene

position:6067951:-1
position: 6067951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6191686:-1
position: 6191686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6067951-6191686:-1:exon

spire2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: spire2
product: spire type actin nucleation factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033035658.1
SIO_010081: spire2
subclass of: SO_0000673
so part of: spire2
location: complement(join(6067951..6069885,6072837..6072952,6074320..6074347,6075300..6075367,6077543..6077680,6079426..6079556,6092430..6092610,6095777..6095952,6098939..6099068,6111877..6111963,6118772..6118936,6120528..6120605,6142728..6143081,6161331..6161374,6191546..6191686))
location: region:6067951-6191686:-1
so has part: feature:6191546-6191686:-1:exon
so has part: feature:6161331-6161374:-1:exon
so has part: feature:6142728-6143081:-1:exon
so has part: feature:6120528-6120605:-1:exon
so has part: feature:6118772-6118936:-1:exon
so has part: feature:6111877-6111963:-1:exon
so has part: feature:6098939-6099068:-1:exon
so has part: feature:6095777-6095952:-1:exon
so has part: feature:6092430-6092610:-1:exon
so has part: feature:6079426-6079556:-1:exon
so has part: feature:6077543-6077680:-1:exon
so has part: feature:6075300-6075367:-1:exon
so has part: feature:6074320-6074347:-1:exon
so has part: feature:6072837-6072952:-1:exon
so has part: feature:6067951-6069885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6191546-6191686:-1:exon

position:6191546:-1
position: 6191546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6161331-6161374:-1:exon

position:6161331:-1
position: 6161331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6161374:-1
position: 6161374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6142728-6143081:-1:exon

position:6142728:-1
position: 6142728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6143081:-1
position: 6143081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6120528-6120605:-1:exon

position:6120528:-1
position: 6120528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6120605:-1
position: 6120605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6118772-6118936:-1:exon

position:6118772:-1
position: 6118772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6118936:-1
position: 6118936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6111877-6111963:-1:exon

position:6111877:-1
position: 6111877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6111963:-1
position: 6111963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6098939-6099068:-1:exon

position:6098939:-1
position: 6098939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6099068:-1
position: 6099068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6095777-6095952:-1:exon

position:6095777:-1
position: 6095777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6095952:-1
position: 6095952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6092430-6092610:-1:exon

position:6092430:-1
position: 6092430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6092610:-1
position: 6092610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6079426-6079556:-1:exon

position:6079426:-1
position: 6079426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6079556:-1
position: 6079556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6077543-6077680:-1:exon

position:6077543:-1
position: 6077543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6077680:-1
position: 6077680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6075300-6075367:-1:exon

position:6075300:-1
position: 6075300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6075367:-1
position: 6075367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6074320-6074347:-1:exon

position:6074320:-1
position: 6074320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6074347:-1
position: 6074347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6072837-6072952:-1:exon

position:6072837:-1
position: 6072837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6072952:-1
position: 6072952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6067951-6069885:-1:exon

position:6069885:-1
position: 6069885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

spire2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: spire2
product: spire type actin nucleation factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033035657.1
SIO_010081: spire2
subclass of: SO_0000673
so part of: spire2
location: complement(join(6067951..6069885,6072837..6072952,6074320..6074347,6075300..6075367,6077543..6077680,6079426..6079556,6092430..6092610,6095777..6095952,6098939..6099068,6111877..6111963,6118772..6118936,6120528..6120605,6142728..6143081,6161331..6161374,6177938..6178326))
location: region:6067951-6178326:-1
so has part: feature:6177938-6178326:-1:exon
so has part: feature:6161331-6161374:-1:exon
so has part: feature:6142728-6143081:-1:exon
so has part: feature:6120528-6120605:-1:exon
so has part: feature:6118772-6118936:-1:exon
so has part: feature:6111877-6111963:-1:exon
so has part: feature:6098939-6099068:-1:exon
so has part: feature:6095777-6095952:-1:exon
so has part: feature:6092430-6092610:-1:exon
so has part: feature:6079426-6079556:-1:exon
so has part: feature:6077543-6077680:-1:exon
so has part: feature:6075300-6075367:-1:exon
so has part: feature:6074320-6074347:-1:exon
so has part: feature:6072837-6072952:-1:exon
so has part: feature:6067951-6069885:-1:exon

position:6178326:-1
position: 6178326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6177938-6178326:-1:exon

position:6177938:-1
position: 6177938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6161331-6161374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6142728-6143081:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6120528-6120605:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6118772-6118936:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6111877-6111963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6098939-6099068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6095777-6095952:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6092430-6092610:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6079426-6079556:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6077543-6077680:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6075300-6075367:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6074320-6074347:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6072837-6072952:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6067951-6069885:-1:exon

spire2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: spire2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spire homolog 2 isoform X2
translation: MERKCAANSKMKMSPPLCTERQVVQSLGFAIYRALDWGLDENEERELSQQLEQLIDQMANNDSEGTNGIADEGYSGQDDDEEGDATPRPISTFEQVIKACTEHLVDKSEADAHFQAVCKALFAETLELQTFLVKIKEAKELLKKMQVGESQEMPLVELDNLNHTDWARIWVQLMRDLRHGVKLKKVEEKQYNPLPTEYHLTPFEMLMQDIKTQKYKLRKVMVDGDIPPCVKKNAHELILDFIRSRPPLKPVSERNLRPKPQKPRSLHERILEEIKSSERKLRPVQIVGRKKNKEPTFGSLPCLVHACTEELKSTSCIDLSIPEAMGTAQRPRPKVLLKAPTLAEMDEMCISEEEDSPNGEIRRVISSPVPLKRDRSFSAELQSKSAYLSSKDTHTKLHSVTDSVPGAVSQYKVEQNEEMWPAVAQRSRSSSARGVILRTSRGASETRSNVTKRQLMEEFSHPVESLALTVEEIINVRKVLVKAEMEKFLQNKDLYNNLKKGKVCCCCKTKFPMFSWPSTCLFCKRSVCGTCILKIKIPSKKLAHIPVYTLGFENIQAISQTKMALAKGFFQSQSLRNLSKRSVEQEFPHLYTHGCSFKDVCAECAKFVADVINSSRKSMDLLNNSPSRRVQSMYMCSTRS
SIO_010081: spire2
subclass of: SO_0000673
so part of: spire2
location: complement(join(6069681..6069885,6072837..6072952,6074320..6074347,6075300..6075367,6077543..6077680,6079426..6079556,6092430..6092610,6095777..6095952,6098939..6099068,6111877..6111963,6118772..6118936,6120528..6120605,6142728..6143081,6161331..6161374,6191546..6191567))
location: region:6069681-6191567:-1
so has part: feature:6191546-6191567:-1:exon
so has part: feature:6161331-6161374:-1:exon
so has part: feature:6142728-6143081:-1:exon
so has part: feature:6120528-6120605:-1:exon
so has part: feature:6118772-6118936:-1:exon
so has part: feature:6111877-6111963:-1:exon
so has part: feature:6098939-6099068:-1:exon
so has part: feature:6095777-6095952:-1:exon
so has part: feature:6092430-6092610:-1:exon
so has part: feature:6079426-6079556:-1:exon
so has part: feature:6077543-6077680:-1:exon
so has part: feature:6075300-6075367:-1:exon
so has part: feature:6074320-6074347:-1:exon
so has part: feature:6072837-6072952:-1:exon
so has part: feature:6069681-6069885:-1:exon

XP_032891549.1
type: Protein
SIO_000068: ncbiprotein

position:6069681:-1
position: 6069681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6191567:-1
position: 6191567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6191546-6191567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6161331-6161374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6142728-6143081:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6120528-6120605:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6118772-6118936:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6111877-6111963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6098939-6099068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6095777-6095952:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6092430-6092610:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6079426-6079556:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6077543-6077680:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6075300-6075367:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6074320-6074347:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6072837-6072952:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6069681-6069885:-1:exon

spire2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: spire2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spire homolog 2 isoform X1
translation: MARSASDGEPEQPVAGSGEALEPQVLPLDEILRAYEQPVNEEQAWAVCYQCCRSLRTHWPREQVRVGRVRELAAILLHRDGTVSFCGEQRSSALADSKMKMSPPLCTERQVVQSLGFAIYRALDWGLDENEERELSQQLEQLIDQMANNDSEGTNGIADEGYSGQDDDEEGDATPRPISTFEQVIKACTEHLVDKSEADAHFQAVCKALFAETLELQTFLVKIKEAKELLKKMQVGESQEMPLVELDNLNHTDWARIWVQLMRDLRHGVKLKKVEEKQYNPLPTEYHLTPFEMLMQDIKTQKYKLRKVMVDGDIPPCVKKNAHELILDFIRSRPPLKPVSERNLRPKPQKPRSLHERILEEIKSSERKLRPVQIVGRKKNKEPTFGSLPCLVHACTEELKSTSCIDLSIPEAMGTAQRPRPKVLLKAPTLAEMDEMCISEEEDSPNGEIRRVISSPVPLKRDRSFSAELQSKSAYLSSKDTHTKLHSVTDSVPGAVSQYKVEQNEEMWPAVAQRSRSSSARGVILRTSRGASETRSNVTKRQLMEEFSHPVESLALTVEEIINVRKVLVKAEMEKFLQNKDLYNNLKKGKVCCCCKTKFPMFSWPSTCLFCKRSVCGTCILKIKIPSKKLAHIPVYTLGFENIQAISQTKMALAKGFFQSQSLRNLSKRSVEQEFPHLYTHGCSFKDVCAECAKFVADVINSSRKSMDLLNNSPSRRVQSMYMCSTRS
SIO_010081: spire2
subclass of: SO_0000673
so part of: spire2
location: complement(join(6069681..6069885,6072837..6072952,6074320..6074347,6075300..6075367,6077543..6077680,6079426..6079556,6092430..6092610,6095777..6095952,6098939..6099068,6111877..6111963,6118772..6118936,6120528..6120605,6142728..6143081,6161331..6161374,6177938..6178223))
location: region:6069681-6178223:-1
so has part: feature:6177938-6178223:-1:exon
so has part: feature:6161331-6161374:-1:exon
so has part: feature:6142728-6143081:-1:exon
so has part: feature:6120528-6120605:-1:exon
so has part: feature:6118772-6118936:-1:exon
so has part: feature:6111877-6111963:-1:exon
so has part: feature:6098939-6099068:-1:exon
so has part: feature:6095777-6095952:-1:exon
so has part: feature:6092430-6092610:-1:exon
so has part: feature:6079426-6079556:-1:exon
so has part: feature:6077543-6077680:-1:exon
so has part: feature:6075300-6075367:-1:exon
so has part: feature:6074320-6074347:-1:exon
so has part: feature:6072837-6072952:-1:exon
so has part: feature:6069681-6069885:-1:exon

XP_032891548.1
type: Protein
SIO_000068: ncbiprotein

position:6178223:-1
position: 6178223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6177938-6178223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6161331-6161374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6142728-6143081:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6120528-6120605:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6118772-6118936:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6111877-6111963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6098939-6099068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6095777-6095952:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6092430-6092610:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6079426-6079556:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6077543-6077680:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6075300-6075367:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6074320-6074347:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6072837-6072952:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6069681-6069885:-1:exon

fanca
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: fanca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6191817..6343126
location: region:6191817-6343126:1
so has part: feature:6191817-6343126:1:exon
subclass of: SO_0000010

116982436
type: Gene
SIO_000068: ncbigene

position:6191817:1
position: 6191817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6343126:1
position: 6343126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6191817-6343126:1:exon

fanca
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fanca
product: FA complementation group A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033035659.1
SIO_010081: fanca
subclass of: SO_0000673
so part of: fanca
location: join(6191817..6192387,6197813..6197922,6198077..6198158,6199471..6199613,6201187..6201282,6204571..6204644,6209028..6209140,6213639..6213721,6213820..6213853,6217126..6217195,6220917..6221029,6225548..6225624,6234711..6234852,6251503..6251636,6255244..6255354,6257755..6257850,6258092..6258151,6258897..6258985,6262339..6262399,6262518..6262567,6263794..6263870,6265941..6266048,6268670..6268803,6273743..6273813,6278296..6278395,6281833..6282017,6284975..6285080,6289789..6289959,6293154..6293227,6293753..6293881,6295963..6296053,6301454..6301608,6304046..6304151,6307212..6307271,6311676..6311780,6316685..6316797,6319713..6319854,6332419..6332481,6333573..6333678,6336366..6336441,6339070..6339232,6340678..6340770,6342083..6343126)
location: region:6191817-6343126:1
so has part: feature:6191817-6192387:1:exon
so has part: feature:6197813-6197922:1:exon
so has part: feature:6198077-6198158:1:exon
so has part: feature:6199471-6199613:1:exon
so has part: feature:6201187-6201282:1:exon
so has part: feature:6204571-6204644:1:exon
so has part: feature:6209028-6209140:1:exon
so has part: feature:6213639-6213721:1:exon
so has part: feature:6213820-6213853:1:exon
so has part: feature:6217126-6217195:1:exon
so has part: feature:6220917-6221029:1:exon
so has part: feature:6225548-6225624:1:exon
so has part: feature:6234711-6234852:1:exon
so has part: feature:6251503-6251636:1:exon
so has part: feature:6255244-6255354:1:exon
so has part: feature:6257755-6257850:1:exon
so has part: feature:6258092-6258151:1:exon
so has part: feature:6258897-6258985:1:exon
so has part: feature:6262339-6262399:1:exon
so has part: feature:6262518-6262567:1:exon
so has part: feature:6263794-6263870:1:exon
so has part: feature:6265941-6266048:1:exon
so has part: feature:6268670-6268803:1:exon
so has part: feature:6273743-6273813:1:exon
so has part: feature:6278296-6278395:1:exon
so has part: feature:6281833-6282017:1:exon
so has part: feature:6284975-6285080:1:exon
so has part: feature:6289789-6289959:1:exon
so has part: feature:6293154-6293227:1:exon
so has part: feature:6293753-6293881:1:exon
so has part: feature:6295963-6296053:1:exon
so has part: feature:6301454-6301608:1:exon
so has part: feature:6304046-6304151:1:exon
so has part: feature:6307212-6307271:1:exon
so has part: feature:6311676-6311780:1:exon
so has part: feature:6316685-6316797:1:exon
so has part: feature:6319713-6319854:1:exon
so has part: feature:6332419-6332481:1:exon
so has part: feature:6333573-6333678:1:exon
so has part: feature:6336366-6336441:1:exon
so has part: feature:6339070-6339232:1:exon
so has part: feature:6340678-6340770:1:exon
so has part: feature:6342083-6343126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6191817-6192387:1:exon

position:6192387:1
position: 6192387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6197813-6197922:1:exon

position:6197813:1
position: 6197813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6197922:1
position: 6197922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6198077-6198158:1:exon

position:6198077:1
position: 6198077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6198158:1
position: 6198158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6199471-6199613:1:exon

position:6199471:1
position: 6199471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6199613:1
position: 6199613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6201187-6201282:1:exon

position:6201187:1
position: 6201187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6201282:1
position: 6201282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6204571-6204644:1:exon

position:6204571:1
position: 6204571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6204644:1
position: 6204644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6209028-6209140:1:exon

position:6209028:1
position: 6209028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6209140:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:6213639-6213721:1:exon

position:6213639:1
position: 6213639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6213721:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6213820-6213853:1:exon

position:6213820:1
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reference: sequence
type: ForwardStrandPosition
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position:6213853:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:6217126-6217195:1:exon

position:6217126:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6217195:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6220917-6221029:1:exon

position:6220917:1
position: 6220917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6221029:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:6225548-6225624:1:exon

position:6225548:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6225624:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:6234711-6234852:1:exon

position:6234711:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6234852:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:6251503-6251636:1:exon

position:6251503:1
position: 6251503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6251636:1
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:6255244-6255354:1:exon

position:6255244:1
position: 6255244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6255354:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6257755-6257850:1:exon

position:6257755:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6257850:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6258092-6258151:1:exon

position:6258092:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6258151:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6258897-6258985:1:exon

position:6258897:1
position: 6258897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6258985:1
position: 6258985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6262339-6262399:1:exon

position:6262339:1
position: 6262339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6262399:1
position: 6262399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6262518-6262567:1:exon

position:6262518:1
position: 6262518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6262567:1
position: 6262567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6263794-6263870:1:exon

position:6263794:1
position: 6263794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6263870:1
position: 6263870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6265941-6266048:1:exon

position:6265941:1
position: 6265941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6266048:1
position: 6266048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6268670-6268803:1:exon

position:6268670:1
position: 6268670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6268803:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6273743-6273813:1:exon

position:6273743:1
position: 6273743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6273813:1
position: 6273813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6278296-6278395:1:exon

position:6278296:1
position: 6278296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6278395:1
position: 6278395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:6281833-6282017:1:exon

position:6281833:1
position: 6281833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6282017:1
position: 6282017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:6284975-6285080:1:exon

position:6284975:1
position: 6284975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6285080:1
position: 6285080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:6289789-6289959:1:exon

position:6289789:1
position: 6289789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6289959:1
position: 6289959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:6293154-6293227:1:exon

position:6293154:1
position: 6293154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6293227:1
position: 6293227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:6293753-6293881:1:exon

position:6293753:1
position: 6293753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6293881:1
position: 6293881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:6295963-6296053:1:exon

position:6295963:1
position: 6295963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6296053:1
position: 6296053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:6301454-6301608:1:exon

position:6301454:1
position: 6301454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6301608:1
position: 6301608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:6304046-6304151:1:exon

position:6304046:1
position: 6304046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6304151:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:6307212-6307271:1:exon

position:6307212:1
position: 6307212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6307271:1
position: 6307271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:6311676-6311780:1:exon

position:6311676:1
position: 6311676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6311780:1
position: 6311780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:6316685-6316797:1:exon

position:6316685:1
position: 6316685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6316797:1
position: 6316797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:6319713-6319854:1:exon

position:6319713:1
position: 6319713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6319854:1
position: 6319854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:6332419-6332481:1:exon

position:6332419:1
position: 6332419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6332481:1
position: 6332481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:6333573-6333678:1:exon

position:6333573:1
position: 6333573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6333678:1
position: 6333678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:6336366-6336441:1:exon

position:6336366:1
position: 6336366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6336441:1
position: 6336441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:6339070-6339232:1:exon

position:6339070:1
position: 6339070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6339232:1
position: 6339232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:6340678-6340770:1:exon

position:6340678:1
position: 6340678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6340770:1
position: 6340770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:6342083-6343126:1:exon

position:6342083:1
position: 6342083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fanca
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: fanca
product: FA complementation group A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033035660.1
SIO_010081: fanca
subclass of: SO_0000673
so part of: fanca
location: join(6191846..6192387,6197813..6197922,6198077..6198158,6199471..6199613,6201211..6201282,6204571..6204644,6209028..6209140,6213639..6213721,6213820..6213853,6217126..6217195,6220917..6221029,6225548..6225624,6234711..6234852,6251503..6251636,6255244..6255354,6257755..6257850,6258092..6258151,6258897..6258985,6262339..6262399,6262518..6262567,6263794..6263870,6265941..6266048,6268670..6268803,6273743..6273813,6278296..6278395,6281833..6282017,6284975..6285080,6289789..6289959,6293154..6293227,6293753..6293881,6295963..6296053,6301454..6301608,6304046..6304151,6307212..6307271,6311676..6311780,6316685..6316797,6319713..6319854,6332419..6332481,6333573..6333678,6336366..6336441,6339070..6339232,6340678..6340770,6342083..6343126)
location: region:6191846-6343126:1
so has part: feature:6191846-6192387:1:exon
so has part: feature:6197813-6197922:1:exon
so has part: feature:6198077-6198158:1:exon
so has part: feature:6199471-6199613:1:exon
so has part: feature:6201211-6201282:1:exon
so has part: feature:6204571-6204644:1:exon
so has part: feature:6209028-6209140:1:exon
so has part: feature:6213639-6213721:1:exon
so has part: feature:6213820-6213853:1:exon
so has part: feature:6217126-6217195:1:exon
so has part: feature:6220917-6221029:1:exon
so has part: feature:6225548-6225624:1:exon
so has part: feature:6234711-6234852:1:exon
so has part: feature:6251503-6251636:1:exon
so has part: feature:6255244-6255354:1:exon
so has part: feature:6257755-6257850:1:exon
so has part: feature:6258092-6258151:1:exon
so has part: feature:6258897-6258985:1:exon
so has part: feature:6262339-6262399:1:exon
so has part: feature:6262518-6262567:1:exon
so has part: feature:6263794-6263870:1:exon
so has part: feature:6265941-6266048:1:exon
so has part: feature:6268670-6268803:1:exon
so has part: feature:6273743-6273813:1:exon
so has part: feature:6278296-6278395:1:exon
so has part: feature:6281833-6282017:1:exon
so has part: feature:6284975-6285080:1:exon
so has part: feature:6289789-6289959:1:exon
so has part: feature:6293154-6293227:1:exon
so has part: feature:6293753-6293881:1:exon
so has part: feature:6295963-6296053:1:exon
so has part: feature:6301454-6301608:1:exon
so has part: feature:6304046-6304151:1:exon
so has part: feature:6307212-6307271:1:exon
so has part: feature:6311676-6311780:1:exon
so has part: feature:6316685-6316797:1:exon
so has part: feature:6319713-6319854:1:exon
so has part: feature:6332419-6332481:1:exon
so has part: feature:6333573-6333678:1:exon
so has part: feature:6336366-6336441:1:exon
so has part: feature:6339070-6339232:1:exon
so has part: feature:6340678-6340770:1:exon
so has part: feature:6342083-6343126:1:exon

position:6191846:1
position: 6191846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6191846-6192387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6197813-6197922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6198077-6198158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6199471-6199613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6201211-6201282:1:exon

position:6201211:1
position: 6201211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6204571-6204644:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6209028-6209140:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6213639-6213721:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6213820-6213853:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6217126-6217195:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6220917-6221029:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6225548-6225624:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6234711-6234852:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6251503-6251636:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6255244-6255354:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6257755-6257850:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6258092-6258151:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6258897-6258985:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6262339-6262399:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6262518-6262567:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6263794-6263870:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6265941-6266048:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6268670-6268803:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6273743-6273813:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6278296-6278395:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6281833-6282017:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6284975-6285080:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6289789-6289959:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6293154-6293227:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6293753-6293881:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6295963-6296053:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6301454-6301608:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6304046-6304151:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:6307212-6307271:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:6311676-6311780:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:6316685-6316797:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:6319713-6319854:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:6332419-6332481:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:6333573-6333678:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:6336366-6336441:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:6339070-6339232:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:6340678-6340770:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:6342083-6343126:1:exon

fanca
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fanca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group A protein isoform X1
translation: MSSAPSDCRFDVTRRKTFSQLLGSRSRKQKRRCSSELVPREAVVRLMKHHQNLGDLLLEVTGSGSDRDGVDSDDHNAGTPARGSFIASVFREQALMKDVPPGLLTARTAVEKIQQIEQLGLTPRHTVMLDADQRGKLVCLLQSLRELMSTGMLSRLQFREEIWKAKEAPMLEVVWHLQKENIVSLEELVTSNPDATFVVRWLFDNLCLLCSEAEDQYQHQDIPRQILSDIVAELVGNGFKESNNLESDRKARQFSQVCFEVLNRMLLWLLDNLCKENETEGASVERATQFWLNVFDTALFHGTLSPDLLKQFFYHTLTQILTFNPVLEASDAIRMQGEWCFAKTKILLTTLYRKIFVLFSAEELIVHLRQVLETHEVNWQNVLSCASTLLVCQPPTQQLLKELLANLLANSFENYELESIITAFLLVRQAAVEGPAVFISYSEWFKKSFGSANGYHGGSKKALIFLLKFLTDMVPFETVQYLKVHILHPPYVPSKYRALLLEYVSLAKTRLADLQVSIEDMGLYEDLSTAHEAPKPHCQALQDVEKAVQIFETTGKIPASVMEASIFRRPYYLARFLPALLAPRVLPDSLDSHMAFIGSLKRADKIPDTMYASYIHACNREKQQQLEGVSTFEAMDHGREPIEVLSAALEELRKVAIDPNKTDVVSAQIAVISGQLKTMIDDEDNCTAMDKPIQLDTVVDSLGPLEMEVRDLLLKSFCQTFLVVSSFNPPQRQGEWASLFVKMLCGHRRLLCAVLLRVLHLTSRQASSLSDVHVLGLAGFTLHIHILRISLSVESLQSAGKEEVSFVSHLNQSLVCRTGESSTFCLRFCTAAVAYAVCLSSSRCSSALDVVQQFVPPVFMQKLQYVIPRLIPKCRRDHDVVVEPIWNNLVGLHLNWTAAAISLFKHHTFKELAEMKHFQLTFYDWLMFELEVQPHGDLLSDVDRQEYQHWACYQHYLPSPLAAGGCGGDLLTACRTIINSLMDFSKRAKVQSFEEFSCSRRPSFNRSSYENIICRLQEMVFDLESVRAKAPREDGHFLLDVFLGRRAKLELQTLSKQIEQQIELQLFTRILVALPPCVLFKTRIHGLKTTLECEEFFHFTNAELRNGYCKEFVLPFHIASHFFRGLLNASVHCEKPSSAVDGILSNSKVRCPLLMLSATYWWARLEPVLCTQWKRSSDTPFPRELQTMLDSQLWASRLLVGKLESGPPCSPWVLGAFLYFTLQRGNSLKMLQTAMREICAENKEFQVSVLYLTLMHLVSSLLQPKETSDLTVPLKTCADMIMILEEQNQPWLDIFMVVNKDYKPHQILFSMISDVERKLLPIVFYSLMIILDPKLVSSIIKHSDFLFVAITLHSAMVKLFLDGENIIPVSDQPDLQNSNQPDPLELITKGRRFLLRVIPSCSGQIISQHNKLQAVCKDIDLELKASLDHQLQLCAGDGLYSEPTLL
SIO_010081: fanca
subclass of: SO_0000673
so part of: fanca
location: join(6192321..6192387,6197813..6197922,6198077..6198158,6199471..6199613,6201187..6201282,6204571..6204644,6209028..6209140,6213639..6213721,6213820..6213853,6217126..6217195,6220917..6221029,6225548..6225624,6234711..6234852,6251503..6251636,6255244..6255354,6257755..6257850,6258092..6258151,6258897..6258985,6262339..6262399,6262518..6262567,6263794..6263870,6265941..6266048,6268670..6268803,6273743..6273813,6278296..6278395,6281833..6282017,6284975..6285080,6289789..6289959,6293154..6293227,6293753..6293881,6295963..6296053,6301454..6301608,6304046..6304151,6307212..6307271,6311676..6311780,6316685..6316797,6319713..6319854,6332419..6332481,6333573..6333678,6336366..6336441,6339070..6339232,6340678..6340770,6342083..6342190)
location: region:6192321-6342190:1
so has part: feature:6192321-6192387:1:exon
so has part: feature:6197813-6197922:1:exon
so has part: feature:6198077-6198158:1:exon
so has part: feature:6199471-6199613:1:exon
so has part: feature:6201187-6201282:1:exon
so has part: feature:6204571-6204644:1:exon
so has part: feature:6209028-6209140:1:exon
so has part: feature:6213639-6213721:1:exon
so has part: feature:6213820-6213853:1:exon
so has part: feature:6217126-6217195:1:exon
so has part: feature:6220917-6221029:1:exon
so has part: feature:6225548-6225624:1:exon
so has part: feature:6234711-6234852:1:exon
so has part: feature:6251503-6251636:1:exon
so has part: feature:6255244-6255354:1:exon
so has part: feature:6257755-6257850:1:exon
so has part: feature:6258092-6258151:1:exon
so has part: feature:6258897-6258985:1:exon
so has part: feature:6262339-6262399:1:exon
so has part: feature:6262518-6262567:1:exon
so has part: feature:6263794-6263870:1:exon
so has part: feature:6265941-6266048:1:exon
so has part: feature:6268670-6268803:1:exon
so has part: feature:6273743-6273813:1:exon
so has part: feature:6278296-6278395:1:exon
so has part: feature:6281833-6282017:1:exon
so has part: feature:6284975-6285080:1:exon
so has part: feature:6289789-6289959:1:exon
so has part: feature:6293154-6293227:1:exon
so has part: feature:6293753-6293881:1:exon
so has part: feature:6295963-6296053:1:exon
so has part: feature:6301454-6301608:1:exon
so has part: feature:6304046-6304151:1:exon
so has part: feature:6307212-6307271:1:exon
so has part: feature:6311676-6311780:1:exon
so has part: feature:6316685-6316797:1:exon
so has part: feature:6319713-6319854:1:exon
so has part: feature:6332419-6332481:1:exon
so has part: feature:6333573-6333678:1:exon
so has part: feature:6336366-6336441:1:exon
so has part: feature:6339070-6339232:1:exon
so has part: feature:6340678-6340770:1:exon
so has part: feature:6342083-6342190:1:exon

XP_032891550.1
type: Protein
SIO_000068: ncbiprotein

position:6192321:1
position: 6192321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6342190:1
position: 6342190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6192321-6192387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6197813-6197922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6198077-6198158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6199471-6199613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6201187-6201282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6204571-6204644:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6209028-6209140:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6213639-6213721:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6213820-6213853:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6217126-6217195:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6220917-6221029:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6225548-6225624:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6234711-6234852:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6251503-6251636:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6255244-6255354:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6257755-6257850:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6258092-6258151:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6258897-6258985:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6262339-6262399:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6262518-6262567:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6263794-6263870:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6265941-6266048:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6268670-6268803:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6273743-6273813:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6278296-6278395:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6281833-6282017:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6284975-6285080:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6289789-6289959:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6293154-6293227:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6293753-6293881:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6295963-6296053:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6301454-6301608:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6304046-6304151:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:6307212-6307271:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:6311676-6311780:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:6316685-6316797:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:6319713-6319854:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:6332419-6332481:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:6333573-6333678:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:6336366-6336441:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:6339070-6339232:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:6340678-6340770:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:6342083-6342190:1:exon

fanca
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: fanca
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group A protein isoform X2
translation: MSSAPSDCRFDVTRRKTFSQLLGSRSRKQKRRCSSELVPREAVVRLMKHHQNLGDLLLEVTGSGSDRDGVDSDDHNAGTPARGSFIASVFREQALMKDVPPGLLTARTAVEKIQQIEQLGLTPRHTVMLDADQRSLRELMSTGMLSRLQFREEIWKAKEAPMLEVVWHLQKENIVSLEELVTSNPDATFVVRWLFDNLCLLCSEAEDQYQHQDIPRQILSDIVAELVGNGFKESNNLESDRKARQFSQVCFEVLNRMLLWLLDNLCKENETEGASVERATQFWLNVFDTALFHGTLSPDLLKQFFYHTLTQILTFNPVLEASDAIRMQGEWCFAKTKILLTTLYRKIFVLFSAEELIVHLRQVLETHEVNWQNVLSCASTLLVCQPPTQQLLKELLANLLANSFENYELESIITAFLLVRQAAVEGPAVFISYSEWFKKSFGSANGYHGGSKKALIFLLKFLTDMVPFETVQYLKVHILHPPYVPSKYRALLLEYVSLAKTRLADLQVSIEDMGLYEDLSTAHEAPKPHCQALQDVEKAVQIFETTGKIPASVMEASIFRRPYYLARFLPALLAPRVLPDSLDSHMAFIGSLKRADKIPDTMYASYIHACNREKQQQLEGVSTFEAMDHGREPIEVLSAALEELRKVAIDPNKTDVVSAQIAVISGQLKTMIDDEDNCTAMDKPIQLDTVVDSLGPLEMEVRDLLLKSFCQTFLVVSSFNPPQRQGEWASLFVKMLCGHRRLLCAVLLRVLHLTSRQASSLSDVHVLGLAGFTLHIHILRISLSVESLQSAGKEEVSFVSHLNQSLVCRTGESSTFCLRFCTAAVAYAVCLSSSRCSSALDVVQQFVPPVFMQKLQYVIPRLIPKCRRDHDVVVEPIWNNLVGLHLNWTAAAISLFKHHTFKELAEMKHFQLTFYDWLMFELEVQPHGDLLSDVDRQEYQHWACYQHYLPSPLAAGGCGGDLLTACRTIINSLMDFSKRAKVQSFEEFSCSRRPSFNRSSYENIICRLQEMVFDLESVRAKAPREDGHFLLDVFLGRRAKLELQTLSKQIEQQIELQLFTRILVALPPCVLFKTRIHGLKTTLECEEFFHFTNAELRNGYCKEFVLPFHIASHFFRGLLNASVHCEKPSSAVDGILSNSKVRCPLLMLSATYWWARLEPVLCTQWKRSSDTPFPRELQTMLDSQLWASRLLVGKLESGPPCSPWVLGAFLYFTLQRGNSLKMLQTAMREICAENKEFQVSVLYLTLMHLVSSLLQPKETSDLTVPLKTCADMIMILEEQNQPWLDIFMVVNKDYKPHQILFSMISDVERKLLPIVFYSLMIILDPKLVSSIIKHSDFLFVAITLHSAMVKLFLDGENIIPVSDQPDLQNSNQPDPLELITKGRRFLLRVIPSCSGQIISQHNKLQAVCKDIDLELKASLDHQLQLCAGDGLYSEPTLL
SIO_010081: fanca
subclass of: SO_0000673
so part of: fanca
location: join(6192321..6192387,6197813..6197922,6198077..6198158,6199471..6199613,6201211..6201282,6204571..6204644,6209028..6209140,6213639..6213721,6213820..6213853,6217126..6217195,6220917..6221029,6225548..6225624,6234711..6234852,6251503..6251636,6255244..6255354,6257755..6257850,6258092..6258151,6258897..6258985,6262339..6262399,6262518..6262567,6263794..6263870,6265941..6266048,6268670..6268803,6273743..6273813,6278296..6278395,6281833..6282017,6284975..6285080,6289789..6289959,6293154..6293227,6293753..6293881,6295963..6296053,6301454..6301608,6304046..6304151,6307212..6307271,6311676..6311780,6316685..6316797,6319713..6319854,6332419..6332481,6333573..6333678,6336366..6336441,6339070..6339232,6340678..6340770,6342083..6342190)
location: region:6192321-6342190:1
so has part: feature:6192321-6192387:1:exon
so has part: feature:6197813-6197922:1:exon
so has part: feature:6198077-6198158:1:exon
so has part: feature:6199471-6199613:1:exon
so has part: feature:6201211-6201282:1:exon
so has part: feature:6204571-6204644:1:exon
so has part: feature:6209028-6209140:1:exon
so has part: feature:6213639-6213721:1:exon
so has part: feature:6213820-6213853:1:exon
so has part: feature:6217126-6217195:1:exon
so has part: feature:6220917-6221029:1:exon
so has part: feature:6225548-6225624:1:exon
so has part: feature:6234711-6234852:1:exon
so has part: feature:6251503-6251636:1:exon
so has part: feature:6255244-6255354:1:exon
so has part: feature:6257755-6257850:1:exon
so has part: feature:6258092-6258151:1:exon
so has part: feature:6258897-6258985:1:exon
so has part: feature:6262339-6262399:1:exon
so has part: feature:6262518-6262567:1:exon
so has part: feature:6263794-6263870:1:exon
so has part: feature:6265941-6266048:1:exon
so has part: feature:6268670-6268803:1:exon
so has part: feature:6273743-6273813:1:exon
so has part: feature:6278296-6278395:1:exon
so has part: feature:6281833-6282017:1:exon
so has part: feature:6284975-6285080:1:exon
so has part: feature:6289789-6289959:1:exon
so has part: feature:6293154-6293227:1:exon
so has part: feature:6293753-6293881:1:exon
so has part: feature:6295963-6296053:1:exon
so has part: feature:6301454-6301608:1:exon
so has part: feature:6304046-6304151:1:exon
so has part: feature:6307212-6307271:1:exon
so has part: feature:6311676-6311780:1:exon
so has part: feature:6316685-6316797:1:exon
so has part: feature:6319713-6319854:1:exon
so has part: feature:6332419-6332481:1:exon
so has part: feature:6333573-6333678:1:exon
so has part: feature:6336366-6336441:1:exon
so has part: feature:6339070-6339232:1:exon
so has part: feature:6340678-6340770:1:exon
so has part: feature:6342083-6342190:1:exon

XP_032891551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6192321-6192387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6197813-6197922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6198077-6198158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6199471-6199613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6201211-6201282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6204571-6204644:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6209028-6209140:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6213639-6213721:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6213820-6213853:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6217126-6217195:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6220917-6221029:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6225548-6225624:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6234711-6234852:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6251503-6251636:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6255244-6255354:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6257755-6257850:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6258092-6258151:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6258897-6258985:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6262339-6262399:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6262518-6262567:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6263794-6263870:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6265941-6266048:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6268670-6268803:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6273743-6273813:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6278296-6278395:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6281833-6282017:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6284975-6285080:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6289789-6289959:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6293154-6293227:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:6293753-6293881:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:6295963-6296053:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:6301454-6301608:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:6304046-6304151:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:6307212-6307271:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:6311676-6311780:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:6316685-6316797:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:6319713-6319854:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:6332419-6332481:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:6333573-6333678:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:6336366-6336441:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:6339070-6339232:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:6340678-6340770:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:6342083-6342190:1:exon

LOC116982999
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982999
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6294498..6294656
location: region:6294498-6294656:1
so has part: feature:6294498-6294656:1:exon
subclass of: SO_0000623

116982999
type: Gene
SIO_000068: ncbigene

position:6294498:1
position: 6294498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6294656:1
position: 6294656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6294498-6294656:1:exon

LOC116982999
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snRNA
gene: LOC116982999
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004414584.1
SIO_010081: LOC116982999
subclass of: SO_0000673
so part of: LOC116982999
location: 6294498..6294656
location: region:6294498-6294656:1
so has part: feature:6294498-6294656:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6294498-6294656:1:exon

znf276
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: znf276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6345786..6394467)
location: region:6345786-6394467:-1
so has part: feature:6345786-6394467:-1:exon
subclass of: SO_0000010

116982437
type: Gene
SIO_000068: ncbigene

position:6345786:-1
position: 6345786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6394467:-1
position: 6394467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6345786-6394467:-1:exon

znf276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: znf276
product: zinc finger protein 276, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033035661.1
SIO_010081: znf276
subclass of: SO_0000673
so part of: znf276
location: complement(join(6345786..6348203,6357755..6357854,6360350..6360467,6363929..6364004,6367783..6367875,6369342..6369425,6370384..6370465,6375275..6375817,6377810..6377880,6384271..6384589,6394054..6394467))
location: region:6345786-6394467:-1
so has part: feature:6394054-6394467:-1:exon
so has part: feature:6384271-6384589:-1:exon
so has part: feature:6377810-6377880:-1:exon
so has part: feature:6375275-6375817:-1:exon
so has part: feature:6370384-6370465:-1:exon
so has part: feature:6369342-6369425:-1:exon
so has part: feature:6367783-6367875:-1:exon
so has part: feature:6363929-6364004:-1:exon
so has part: feature:6360350-6360467:-1:exon
so has part: feature:6357755-6357854:-1:exon
so has part: feature:6345786-6348203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6394054-6394467:-1:exon

position:6394054:-1
position: 6394054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6384271-6384589:-1:exon

position:6384271:-1
position: 6384271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6384589:-1
position: 6384589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6377810-6377880:-1:exon

position:6377810:-1
position: 6377810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6377880:-1
position: 6377880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6375275-6375817:-1:exon

position:6375275:-1
position: 6375275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6375817:-1
position: 6375817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6370384-6370465:-1:exon

position:6370384:-1
position: 6370384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6370465:-1
position: 6370465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6369342-6369425:-1:exon

position:6369342:-1
position: 6369342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6369425:-1
position: 6369425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6367783-6367875:-1:exon

position:6367783:-1
position: 6367783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6367875:-1
position: 6367875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6363929-6364004:-1:exon

position:6363929:-1
position: 6363929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6364004:-1
position: 6364004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6360350-6360467:-1:exon

position:6360350:-1
position: 6360350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6360467:-1
position: 6360467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6357755-6357854:-1:exon

position:6357755:-1
position: 6357755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6357854:-1
position: 6357854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6345786-6348203:-1:exon

position:6348203:-1
position: 6348203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

znf276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: znf276
product: zinc finger protein 276, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033035662.1
SIO_010081: znf276
subclass of: SO_0000673
so part of: znf276
location: complement(join(6345786..6348203,6357755..6357854,6360350..6360467,6363929..6364004,6367783..6367875,6369342..6369425,6370384..6370465,6377810..6377880,6384271..6384589,6394054..6394466))
location: region:6345786-6394466:-1
so has part: feature:6394054-6394466:-1:exon
so has part: feature:6384271-6384589:-1:exon
so has part: feature:6377810-6377880:-1:exon
so has part: feature:6370384-6370465:-1:exon
so has part: feature:6369342-6369425:-1:exon
so has part: feature:6367783-6367875:-1:exon
so has part: feature:6363929-6364004:-1:exon
so has part: feature:6360350-6360467:-1:exon
so has part: feature:6357755-6357854:-1:exon
so has part: feature:6345786-6348203:-1:exon

position:6394466:-1
position: 6394466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6394054-6394466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6384271-6384589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6377810-6377880:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6370384-6370465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6369342-6369425:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6367783-6367875:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6363929-6364004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6360350-6360467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6357755-6357854:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6345786-6348203:-1:exon

znf276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: znf276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 276 isoform X2
translation: MKRNKCGRFVSSAVAQKMERLSEAQRQRWLRARRPRPTGEAEAEPPVTGRAPTAASLIMTTSYCRLCHGKFSSRSLRNVFAKVPLIETSPERQRRAQQTFCGDFQKLVGVVVRQDSTLPQYICRNCHAQFYKCWTILKNFIQKVNTSPVAAVQHGQKASRCVAATETSSVQSLSQSPLSNSVSEPVNCNEASCSVRNDVVDGLESSDLSERYLSSEDDREIKVKNGSSDESFQPYWKKKSKLPVKKCNIKDVKKQSGQKRGRKPKSNLEREDFPTMYRCQYKGCCAVYRGVDGLKKHIKEQHEEVRERPCPHPGCNKVFLIDRYLQRHVKLIHTEERNYICDECGQTFKQRKHLSVHQMRHTGAKPLQCEVCGFQCRQRASLKYHMTKHKAEAELEFACDQCEKRFEKAHNLNVHMSMVHPLTQNTDKNKPIEIESSRLSIETLIKQEPS
SIO_010081: znf276
subclass of: SO_0000673
so part of: znf276
location: complement(join(6347954..6348203,6357755..6357854,6360350..6360467,6363929..6364004,6367783..6367875,6369342..6369425,6370384..6370465,6377810..6377880,6384271..6384589,6394054..6394213))
location: region:6347954-6394213:-1
so has part: feature:6394054-6394213:-1:exon
so has part: feature:6384271-6384589:-1:exon
so has part: feature:6377810-6377880:-1:exon
so has part: feature:6370384-6370465:-1:exon
so has part: feature:6369342-6369425:-1:exon
so has part: feature:6367783-6367875:-1:exon
so has part: feature:6363929-6364004:-1:exon
so has part: feature:6360350-6360467:-1:exon
so has part: feature:6357755-6357854:-1:exon
so has part: feature:6347954-6348203:-1:exon

XP_032891553.1
type: Protein
SIO_000068: ncbiprotein

position:6347954:-1
position: 6347954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6394213:-1
position: 6394213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6394054-6394213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6384271-6384589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6377810-6377880:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6370384-6370465:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6369342-6369425:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6367783-6367875:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6363929-6364004:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6360350-6360467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6357755-6357854:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6347954-6348203:-1:exon

znf276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: znf276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 276 isoform X1
translation: MKRNKCGRFVSSAVAQKMERLSEAQRQRWLRARRPRPTGEAEAEPPVTGRAPTAASLIMTTSYCRLCHGKFSSRSLRNVFAKVPLIETSPERQRRAQQTFCGDFQKLVGVVVRQDSTLPQYICRNCHAQFYKCWTILKNFIQKVNTSPVAAVQHGQKASRCVAATETSSVQSLSQSPLSNSVSGDFKQMLNDGVLVASPQGLQILVTWAHHHGSSCGSQPHVQSVLTAEYRGVVGAVWGCPEGHSYILDMHSSRSVVLNEGQCPSSRNKDSMEEVLDGSITLSPRNGTVTENGEGDNVVKHQPVPVLADFQPCIYSGATSRSVDVDNPESLLKKDMFLRSDPEYTECSWEKVQVQDATQPLNVKKPVNCNEASCSVRNDVVDGLESSDLSERYLSSEDDREIKVKNGSSDESFQPYWKKKSKLPVKKCNIKDVKKQSGQKRGRKPKSNLEREDFPTMYRCQYKGCCAVYRGVDGLKKHIKEQHEEVRERPCPHPGCNKVFLIDRYLQRHVKLIHTEERNYICDECGQTFKQRKHLSVHQMRHTGAKPLQCEVCGFQCRQRASLKYHMTKHKAEAELEFACDQCEKRFEKAHNLNVHMSMVHPLTQNTDKNKPIEIESSRLSIETLIKQEPS
SIO_010081: znf276
subclass of: SO_0000673
so part of: znf276
location: complement(join(6347954..6348203,6357755..6357854,6360350..6360467,6363929..6364004,6367783..6367875,6369342..6369425,6370384..6370465,6375275..6375817,6377810..6377880,6384271..6384589,6394054..6394213))
location: region:6347954-6394213:-1
so has part: feature:6394054-6394213:-1:exon
so has part: feature:6384271-6384589:-1:exon
so has part: feature:6377810-6377880:-1:exon
so has part: feature:6375275-6375817:-1:exon
so has part: feature:6370384-6370465:-1:exon
so has part: feature:6369342-6369425:-1:exon
so has part: feature:6367783-6367875:-1:exon
so has part: feature:6363929-6364004:-1:exon
so has part: feature:6360350-6360467:-1:exon
so has part: feature:6357755-6357854:-1:exon
so has part: feature:6347954-6348203:-1:exon

XP_032891552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6394054-6394213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6384271-6384589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6377810-6377880:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6375275-6375817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6370384-6370465:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6369342-6369425:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6367783-6367875:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6363929-6364004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6360350-6360467:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6357755-6357854:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6347954-6348203:-1:exon

nip7
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: nip7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6395417..6408142
location: region:6395417-6408142:1
so has part: feature:6395417-6408142:1:exon
subclass of: SO_0000010

116982438
type: Gene
SIO_000068: ncbigene

position:6395417:1
position: 6395417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6408142:1
position: 6408142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6395417-6408142:1:exon

nip7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: nip7
product: nucleolar pre-rRNA processing protein NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_033035663.1
SIO_010081: nip7
subclass of: SO_0000673
so part of: nip7
location: join(6395417..6395545,6396124..6396210,6398394..6398532,6401747..6401887,6407164..6408142)
location: region:6395417-6408142:1
so has part: feature:6395417-6395545:1:exon
so has part: feature:6396124-6396210:1:exon
so has part: feature:6398394-6398532:1:exon
so has part: feature:6401747-6401887:1:exon
so has part: feature:6407164-6408142:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6395417-6395545:1:exon

position:6395545:1
position: 6395545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6396124-6396210:1:exon

position:6396124:1
position: 6396124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6396210:1
position: 6396210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6398394-6398532:1:exon

position:6398394:1
position: 6398394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6398532:1
position: 6398532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6401747-6401887:1:exon

position:6401747:1
position: 6401747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6401887:1
position: 6401887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6407164-6408142:1:exon

position:6407164:1
position: 6407164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nip7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: nip7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosome subunit biogenesis protein NIP7 homolog
translation: MWWEMRPLTDEETRLLFEKLAKYIGQNIKLLVDRPDGTYCFRLHNNRVYYVSEKILKLATNIARDKLVSLGTCFGKFTKTLKFRLHITALDYLAPYAKYKVWVKPGTEQSFLYGNHILKSGLGRITENTAQYQGVVVYSMADIPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEYIRHEDSLT
SIO_010081: nip7
subclass of: SO_0000673
so part of: nip7
location: join(6395478..6395545,6396124..6396210,6398394..6398532,6401747..6401887,6407164..6407283)
location: region:6395478-6407283:1
so has part: feature:6395478-6395545:1:exon
so has part: feature:6396124-6396210:1:exon
so has part: feature:6398394-6398532:1:exon
so has part: feature:6401747-6401887:1:exon
so has part: feature:6407164-6407283:1:exon

XP_032891554.1
type: Protein
SIO_000068: ncbiprotein

position:6395478:1
position: 6395478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6407283:1
position: 6407283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6395478-6395545:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6396124-6396210:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6398394-6398532:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6401747-6401887:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6407164-6407283:1:exon

LOC116982439
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982439
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6522229..6532333)
location: region:6522229-6532333:-1
so has part: feature:6522229-6532333:-1:exon

116982439
type: Gene
SIO_000068: ncbigene

position:6522229:-1
position: 6522229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6532333:-1
position: 6532333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6522229-6532333:-1:exon

LOC116982439
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116982439
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116982439
subclass of: SO_0000673
so part of: LOC116982439
location: complement(6522229..6522679)
location: region:6522229-6522679:-1
so has part: feature:6522229-6522679:-1:exon

position:6522679:-1
position: 6522679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6522229-6522679:-1:exon

LOC116982439
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116982439
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116982439
subclass of: SO_0000673
so part of: LOC116982439
location: complement(6523810..6524112)
location: region:6523810-6524112:-1
so has part: feature:6523810-6524112:-1:exon

position:6523810:-1
position: 6523810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6524112:-1
position: 6524112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6523810-6524112:-1:exon

LOC116982439
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116982439
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116982439
subclass of: SO_0000673
so part of: LOC116982439
location: complement(6524565..6524885)
location: region:6524565-6524885:-1
so has part: feature:6524565-6524885:-1:exon

position:6524565:-1
position: 6524565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6524885:-1
position: 6524885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6524565-6524885:-1:exon

LOC116982439
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116982439
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116982439
subclass of: SO_0000673
so part of: LOC116982439
location: complement(6526307..6526603)
location: region:6526307-6526603:-1
so has part: feature:6526307-6526603:-1:exon

position:6526307:-1
position: 6526307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6526603:-1
position: 6526603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6526307-6526603:-1:exon

LOC116982439
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116982439
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116982439
subclass of: SO_0000673
so part of: LOC116982439
location: complement(6530529..6530590)
location: region:6530529-6530590:-1
so has part: feature:6530529-6530590:-1:exon

position:6530529:-1
position: 6530529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6530590:-1
position: 6530590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6530529-6530590:-1:exon

LOC116982439
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116982439
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116982439
subclass of: SO_0000673
so part of: LOC116982439
location: complement(6531739..6532051)
location: region:6531739-6532051:-1
so has part: feature:6531739-6532051:-1:exon

position:6531739:-1
position: 6531739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6532051:-1
position: 6532051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6531739-6532051:-1:exon

LOC116982439
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116982439
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116982439
subclass of: SO_0000673
so part of: LOC116982439
location: complement(6532227..6532333)
location: region:6532227-6532333:-1
so has part: feature:6532227-6532333:-1:exon

position:6532227:-1
position: 6532227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6532227-6532333:-1:exon

LOC116982988
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982988
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(6596172..6596351)
location: region:6596172-6596351:-1
so has part: feature:6596172-6596351:-1:exon

116982988
type: Gene
SIO_000068: ncbigene

position:6596172:-1
position: 6596172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6596351:-1
position: 6596351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6596172-6596351:-1:exon

LOC116982988
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116982988
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116982988
subclass of: SO_0000673
so part of: LOC116982988
location: complement(6596172..6596351)
location: region:6596172-6596351:-1
so has part: feature:6596172-6596351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6596172-6596351:-1:exon

LOC116982440
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6618300..6628153
location: region:6618300-6628153:1
so has part: feature:6618300-6628153:1:exon
subclass of: SO_0000011

116982440
type: Gene
SIO_000068: ncbigene

position:6618300:1
position: 6618300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6628153:1
position: 6628153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6618300-6628153:1:exon

LOC116982440
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: lncRNA
gene: LOC116982440
product: uncharacterized LOC116982440
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004414460.1
SIO_010081: LOC116982440
subclass of: SO_0000673
so part of: LOC116982440
location: join(6618300..6618814,6622056..6622061,6628144..6628153)
location: region:6618300-6628153:1
so has part: feature:6618300-6618814:1:exon
so has part: feature:6622056-6622061:1:exon
so has part: feature:6628144-6628153:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6618300-6618814:1:exon

position:6618814:1
position: 6618814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6622056-6622061:1:exon

position:6622056:1
position: 6622056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6622061:1
position: 6622061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6628144-6628153:1:exon

position:6628144:1
position: 6628144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

dpep1
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: dpep1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6639441..6685368)
location: region:6639441-6685368:-1
so has part: feature:6639441-6685368:-1:exon
subclass of: SO_0000010

116982442
type: Gene
SIO_000068: ncbigene

position:6639441:-1
position: 6639441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6685368:-1
position: 6685368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6639441-6685368:-1:exon

dpep1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: dpep1
product: dipeptidase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033035664.1
SIO_010081: dpep1
subclass of: SO_0000673
so part of: dpep1
location: complement(join(6639441..6639685,6647916..6648051,6652259..6652334,6658521..6658605,6660302..6660478,6663616..6663685,6665729..6665879,6672516..6672648,6676611..6676737,6681237..6681355,6685184..6685368))
location: region:6639441-6685368:-1
so has part: feature:6685184-6685368:-1:exon
so has part: feature:6681237-6681355:-1:exon
so has part: feature:6676611-6676737:-1:exon
so has part: feature:6672516-6672648:-1:exon
so has part: feature:6665729-6665879:-1:exon
so has part: feature:6663616-6663685:-1:exon
so has part: feature:6660302-6660478:-1:exon
so has part: feature:6658521-6658605:-1:exon
so has part: feature:6652259-6652334:-1:exon
so has part: feature:6647916-6648051:-1:exon
so has part: feature:6639441-6639685:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6685184-6685368:-1:exon

position:6685184:-1
position: 6685184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6681237-6681355:-1:exon

position:6681237:-1
position: 6681237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6681355:-1
position: 6681355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6676611-6676737:-1:exon

position:6676611:-1
position: 6676611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6676737:-1
position: 6676737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6672516-6672648:-1:exon

position:6672516:-1
position: 6672516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6672648:-1
position: 6672648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6665729-6665879:-1:exon

position:6665729:-1
position: 6665729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6665879:-1
position: 6665879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6663616-6663685:-1:exon

position:6663616:-1
position: 6663616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6663685:-1
position: 6663685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6660302-6660478:-1:exon

position:6660302:-1
position: 6660302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6660478:-1
position: 6660478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6658521-6658605:-1:exon

position:6658521:-1
position: 6658521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6658605:-1
position: 6658605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6652259-6652334:-1:exon

position:6652259:-1
position: 6652259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6652334:-1
position: 6652334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6647916-6648051:-1:exon

position:6647916:-1
position: 6647916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6648051:-1
position: 6648051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6639441-6639685:-1:exon

position:6639685:-1
position: 6639685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

dpep1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: dpep1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dipeptidase 1
translation: MQKRLNQLARYLTLKKHIVVWIQQILQNFHQNLVLGVEAVKSVIKKMWIALFLLCVCQCSADQFRLRAEALMKETPLVDGHNDFPYQLLLRYHNQLSKVDLNKVNETHTNINKLKAGLVGAQFWVAYAPCSTQYKDAVRLTLEQIDVIQRMDSLYSQTFRSARTSKGITTAFQGKQVASLIGVEGGHSIDSSMATLRLFYQMGVRYMTITHSCNTPWADNWRVDAGKDTAQSNGLSEFGKKVILEMNRLGMIVDLAHTSVKTMNDVLDISKAPVMFSHSSAYTLCNHNRNVPDAILKKVRQKNGIVMVNFFNDFVTCKVKATLSDVADHFDYIKKVAGYQSVGFGGDYDGVPRVPTGLDDVSFYPDLVAELLRRKWTDIEVKAALGDNFLRVFQEVEKAKTFTPGDDEPIPYDQVKNSCRTSFGYEDQTDTNNGNPLVFMPAVVTSVYLAHHLLV
SIO_010081: dpep1
subclass of: SO_0000673
so part of: dpep1
location: complement(join(6639512..6639685,6647916..6648051,6652259..6652334,6658521..6658605,6660302..6660478,6663616..6663685,6665729..6665879,6672516..6672648,6676611..6676737,6681237..6681355,6685184..6685303))
location: region:6639512-6685303:-1
so has part: feature:6685184-6685303:-1:exon
so has part: feature:6681237-6681355:-1:exon
so has part: feature:6676611-6676737:-1:exon
so has part: feature:6672516-6672648:-1:exon
so has part: feature:6665729-6665879:-1:exon
so has part: feature:6663616-6663685:-1:exon
so has part: feature:6660302-6660478:-1:exon
so has part: feature:6658521-6658605:-1:exon
so has part: feature:6652259-6652334:-1:exon
so has part: feature:6647916-6648051:-1:exon
so has part: feature:6639512-6639685:-1:exon

XP_032891555.1
type: Protein
SIO_000068: ncbiprotein

position:6639512:-1
position: 6639512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6685303:-1
position: 6685303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6685184-6685303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6681237-6681355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6676611-6676737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6672516-6672648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6665729-6665879:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6663616-6663685:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6660302-6660478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6658521-6658605:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6652259-6652334:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6647916-6648051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6639512-6639685:-1:exon

LOC116982443
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982443
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6760384..6774857
location: region:6760384-6774857:1
so has part: feature:6760384-6774857:1:exon
subclass of: SO_0000010

116982443
type: Gene
SIO_000068: ncbigene

position:6760384:1
position: 6760384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6774857:1
position: 6774857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6760384-6774857:1:exon

LOC116982443
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982443
product: sulfotransferase 2B1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033035665.1
SIO_010081: LOC116982443
subclass of: SO_0000673
so part of: LOC116982443
location: join(6760384..6760554,6763542..6763750,6768329..6768455,6769566..6769660,6772776..6772956,6773046..6774857)
location: region:6760384-6774857:1
so has part: feature:6760384-6760554:1:exon
so has part: feature:6763542-6763750:1:exon
so has part: feature:6768329-6768455:1:exon
so has part: feature:6769566-6769660:1:exon
so has part: feature:6772776-6772956:1:exon
so has part: feature:6773046-6774857:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6760384-6760554:1:exon

position:6760554:1
position: 6760554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6763542-6763750:1:exon

position:6763542:1
position: 6763542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6763750:1
position: 6763750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6768329-6768455:1:exon

position:6768329:1
position: 6768329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6768455:1
position: 6768455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6769566-6769660:1:exon

position:6769566:1
position: 6769566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6769660:1
position: 6769660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6772776-6772956:1:exon

position:6772776:1
position: 6772776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6772956:1
position: 6772956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6773046-6774857:1:exon

position:6773046:1
position: 6773046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116982443
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982443
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfotransferase 2B1-like
translation: MANLDVTVRYSGIDFPGHLHTLKSLESAQKFKFHDTDALIVTYPKSGTTWMQEILTIIYNDGNPQLANTTPNWLRTPWIEHYYCENVVTNMLHQRILTTHLPYHFLAKSLKQTNAKVIYVARNPKDIIVSFYHFHKMANFLPEPGTFGEFLEKFVTGEVNYGSWFEHIKEWMNHGDELNFLFITYEELIKDLRNSVIKLCNFLEHPLSPEATDTIVRHCTFANMKENKMINYTLVPNEIMDQERGKFMRKGVVGDWKEHFTEEQKQAFEKIYQEKLSDSNIMHAWTL
SIO_010081: LOC116982443
subclass of: SO_0000673
so part of: LOC116982443
location: join(6760416..6760554,6763542..6763750,6768329..6768455,6769566..6769660,6772776..6772956,6773046..6773158)
location: region:6760416-6773158:1
so has part: feature:6760416-6760554:1:exon
so has part: feature:6763542-6763750:1:exon
so has part: feature:6768329-6768455:1:exon
so has part: feature:6769566-6769660:1:exon
so has part: feature:6772776-6772956:1:exon
so has part: feature:6773046-6773158:1:exon

XP_032891556.1
type: Protein
SIO_000068: ncbiprotein

position:6760416:1
position: 6760416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6773158:1
position: 6773158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6760416-6760554:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6763542-6763750:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6768329-6768455:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6769566-6769660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6772776-6772956:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6773046-6773158:1:exon

LOC116982969
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6778399..6791100)
location: region:6778399-6791100:-1
so has part: feature:6778399-6791100:-1:exon
subclass of: SO_0000010

116982969
type: Gene
SIO_000068: ncbigene

position:6778399:-1
position: 6778399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6791100:-1
position: 6791100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6778399-6791100:-1:exon

LOC116982969
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982969
product: melatonin receptor type 1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_033036502.1
SIO_010081: LOC116982969
subclass of: SO_0000673
so part of: LOC116982969
location: complement(join(6778399..6778411,6780809..6780962,6789241..6790069,6791095..6791100))
location: region:6778399-6791100:-1
so has part: feature:6791095-6791100:-1:exon
so has part: feature:6789241-6790069:-1:exon
so has part: feature:6780809-6780962:-1:exon
so has part: feature:6778399-6778411:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6791095-6791100:-1:exon

position:6791095:-1
position: 6791095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6789241-6790069:-1:exon

position:6789241:-1
position: 6789241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6790069:-1
position: 6790069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6780809-6780962:-1:exon

position:6780809:-1
position: 6780809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6780962:-1
position: 6780962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6778399-6778411:-1:exon

position:6778411:-1
position: 6778411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116982969
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: melatonin receptor type 1A-like
translation: MEKMFSAGNQTAEAGLSVAELMVDDNMTGLGPSRCMEESGATLKTCIIAVMCGLIILGNTAVFLVISSSVSGWSGNSRHVLISLTGADAALALIVIPLNLYANSVPQLRNQTDSPFCHIVVFLDASILTSSIYSLATISIERYIAVFFPLRYTRLMTNCRIKALIALVWLLPPVLLFPISIPGGIVKVYFSNASLICNLDFSSNVPYTLTLTAFIFFPCSLIMTFANCRLWFAARSQRKRFKLSKVSRRHDAASRILLPVVIVYYICWSPCVCNMIYQALTHQRVPEWLEFVALWLPCGNGFFNCIVYFWLNKSFRKKFQEMGQKLCWSKSQL
SIO_010081: LOC116982969
subclass of: SO_0000673
so part of: LOC116982969
location: complement(join(6778399..6778411,6780809..6780962,6789241..6790069,6791095..6791100))
location: region:6778399-6791100:-1
so has part: feature:6791095-6791100:-1:exon
so has part: feature:6789241-6790069:-1:exon
so has part: feature:6780809-6780962:-1:exon
so has part: feature:6778399-6778411:-1:exon

XP_032892393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6791095-6791100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6789241-6790069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6780809-6780962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6778399-6778411:-1:exon

LOC116982995
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982995
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(6823635..6823814)
location: region:6823635-6823814:-1
so has part: feature:6823635-6823814:-1:exon

116982995
type: Gene
SIO_000068: ncbigene

position:6823635:-1
position: 6823635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6823814:-1
position: 6823814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6823635-6823814:-1:exon

LOC116982995
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116982995
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116982995
subclass of: SO_0000673
so part of: LOC116982995
location: complement(6823635..6823814)
location: region:6823635-6823814:-1
so has part: feature:6823635-6823814:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6823635-6823814:-1:exon

LOC116983002
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116983002
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(6824386..6824493)
location: region:6824386-6824493:-1
so has part: feature:6824386-6824493:-1:exon

116983002
type: Gene
SIO_000068: ncbigene

position:6824386:-1
position: 6824386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6824493:-1
position: 6824493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6824386-6824493:-1:exon

LOC116983002
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116983002
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116983002
subclass of: SO_0000673
so part of: LOC116983002
location: complement(6824386..6824493)
location: region:6824386-6824493:-1
so has part: feature:6824386-6824493:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6824386-6824493:-1:exon

cpne7
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: cpne7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7004361..7185975)
location: region:7004361-7185975:-1
so has part: feature:7004361-7185975:-1:exon
subclass of: SO_0000010

116982444
type: Gene
SIO_000068: ncbigene

position:7004361:-1
position: 7004361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7185975:-1
position: 7185975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7004361-7185975:-1:exon

cpne7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: cpne7
product: copine 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033035666.1
SIO_010081: cpne7
subclass of: SO_0000673
so part of: cpne7
location: complement(join(7004361..7005542,7017262..7017498,7026408..7026541,7031338..7031389,7039664..7039718,7057552..7057685,7067688..7067747,7070523..7070609,7079678..7079776,7086263..7086352,7090234..7090317,7092604..7092678,7103845..7103919,7122408..7122590,7173382..7173866,7185733..7185975))
location: region:7004361-7185975:-1
so has part: feature:7185733-7185975:-1:exon
so has part: feature:7173382-7173866:-1:exon
so has part: feature:7122408-7122590:-1:exon
so has part: feature:7103845-7103919:-1:exon
so has part: feature:7092604-7092678:-1:exon
so has part: feature:7090234-7090317:-1:exon
so has part: feature:7086263-7086352:-1:exon
so has part: feature:7079678-7079776:-1:exon
so has part: feature:7070523-7070609:-1:exon
so has part: feature:7067688-7067747:-1:exon
so has part: feature:7057552-7057685:-1:exon
so has part: feature:7039664-7039718:-1:exon
so has part: feature:7031338-7031389:-1:exon
so has part: feature:7026408-7026541:-1:exon
so has part: feature:7017262-7017498:-1:exon
so has part: feature:7004361-7005542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7185733-7185975:-1:exon

position:7185733:-1
position: 7185733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7173382-7173866:-1:exon

position:7173382:-1
position: 7173382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7173866:-1
position: 7173866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7122408-7122590:-1:exon

position:7122408:-1
position: 7122408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7122590:-1
position: 7122590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7103845-7103919:-1:exon

position:7103845:-1
position: 7103845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7103919:-1
position: 7103919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7092604-7092678:-1:exon

position:7092604:-1
position: 7092604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7092678:-1
position: 7092678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7090234-7090317:-1:exon

position:7090234:-1
position: 7090234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7090317:-1
position: 7090317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7086263-7086352:-1:exon

position:7086263:-1
position: 7086263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7086352:-1
position: 7086352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7079678-7079776:-1:exon

position:7079678:-1
position: 7079678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7079776:-1
position: 7079776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7070523-7070609:-1:exon

position:7070523:-1
position: 7070523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7070609:-1
position: 7070609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7067688-7067747:-1:exon

position:7067688:-1
position: 7067688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7067747:-1
position: 7067747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7057552-7057685:-1:exon

position:7057552:-1
position: 7057552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7057685:-1
position: 7057685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7039664-7039718:-1:exon

position:7039664:-1
position: 7039664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7039718:-1
position: 7039718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7031338-7031389:-1:exon

position:7031338:-1
position: 7031338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7031389:-1
position: 7031389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7026408-7026541:-1:exon

position:7026408:-1
position: 7026408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7026541:-1
position: 7026541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7017262-7017498:-1:exon

position:7017262:-1
position: 7017262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7017498:-1
position: 7017498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7004361-7005542:-1:exon

position:7005542:-1
position: 7005542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

cpne7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: cpne7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copine-7
translation: MTELTGRVSPNPLGVVTAPCVSKVELRVSCKSLLDRDTLNKSDPSVVLLMQSQGHWVEVDRTEVIKSNLHPVFSKIFNVDYYFEEAQKLRFEVYDIHGHCSIGARDDDFLGGVECTLGQIVAQKKMTKPLFLKYGKYAGKSTITVIAEEINGNNGYVELAFCAKKLDDKDLFSKSDPFLEIYRLNDDESEQLVYRTEVIKNNLNPVWESFKVSLSSLCSCDEKRQLKCLVWDYDNRGKHDFIGEFYSTFEELRKAMGENKVHWDCVNPKYKAKKRHYKNSGTVILKDCKLHRVYSFLDYIMGGCQIHFTVAIDFTASNGDPRNSCSLHYINPYQPNEYLKALISVGEICQDYDSDKKFSALGFGARIPPNYVVSHNFAINFNSEDEECEGIQGVVESYQSCLPKIQLYGPTNVSPIIGKVAKVAAEEEKTKEASQYYILLILTDGVVTDMADTREAIVRASHLPMSIIIVGVGNADFTDMEILDGDDGVLRSPKGEPVLRDIVQFVPFREFKNASPAALAKCVLAEVPKQVVEYYSYKAIPPKCLSLDSSESACTTPE
SIO_010081: cpne7
subclass of: SO_0000673
so part of: cpne7
location: complement(join(7005405..7005542,7017262..7017498,7026408..7026541,7031338..7031389,7039664..7039718,7057552..7057685,7067688..7067747,7070523..7070609,7079678..7079776,7086263..7086352,7090234..7090317,7092604..7092678,7103845..7103919,7122408..7122590,7173382..7173555))
location: region:7005405-7173555:-1
so has part: feature:7173382-7173555:-1:exon
so has part: feature:7122408-7122590:-1:exon
so has part: feature:7103845-7103919:-1:exon
so has part: feature:7092604-7092678:-1:exon
so has part: feature:7090234-7090317:-1:exon
so has part: feature:7086263-7086352:-1:exon
so has part: feature:7079678-7079776:-1:exon
so has part: feature:7070523-7070609:-1:exon
so has part: feature:7067688-7067747:-1:exon
so has part: feature:7057552-7057685:-1:exon
so has part: feature:7039664-7039718:-1:exon
so has part: feature:7031338-7031389:-1:exon
so has part: feature:7026408-7026541:-1:exon
so has part: feature:7017262-7017498:-1:exon
so has part: feature:7005405-7005542:-1:exon

XP_032891557.1
type: Protein
SIO_000068: ncbiprotein

position:7005405:-1
position: 7005405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7173555:-1
position: 7173555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7173382-7173555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7122408-7122590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7103845-7103919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7092604-7092678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7090234-7090317:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7086263-7086352:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7079678-7079776:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7070523-7070609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7067688-7067747:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7057552-7057685:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7039664-7039718:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7031338-7031389:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7026408-7026541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7017262-7017498:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7005405-7005542:-1:exon

LOC116982989
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982989
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 7118287..7118395
location: region:7118287-7118395:1
so has part: feature:7118287-7118395:1:exon

116982989
type: Gene
SIO_000068: ncbigene

position:7118287:1
position: 7118287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7118395:1
position: 7118395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7118287-7118395:1:exon

LOC116982989
type: Exon
subclass of: SO_0000147
RO_0002162: 386614
gene: LOC116982989
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116982989
subclass of: SO_0000673
so part of: LOC116982989
location: 7118287..7118395
location: region:7118287-7118395:1
so has part: feature:7118287-7118395:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7118287-7118395:1:exon

LOC116982970
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116982970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7207867..7211720)
location: region:7207867-7211720:-1
so has part: feature:7207867-7211720:-1:exon
subclass of: SO_0000010

116982970
type: Gene
SIO_000068: ncbigene

position:7207867:-1
position: 7207867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7211720:-1
position: 7211720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7207867-7211720:-1:exon

LOC116982970
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: LOC116982970
product: RNA-binding protein 25-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033036503.1
SIO_010081: LOC116982970
subclass of: SO_0000673
so part of: LOC116982970
location: complement(join(7207867..7208335,7208536..7208826,7211638..7211720))
location: region:7207867-7211720:-1
so has part: feature:7211638-7211720:-1:exon
so has part: feature:7208536-7208826:-1:exon
so has part: feature:7207867-7208335:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7211638-7211720:-1:exon

position:7211638:-1
position: 7211638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7208536-7208826:-1:exon

position:7208536:-1
position: 7208536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7208826:-1
position: 7208826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7207867-7208335:-1:exon

position:7208335:-1
position: 7208335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116982970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: LOC116982970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 25-like
translation: MDLEAGEAKYDIGGRALTREIEKQIKQKREQETQQEKTKCLSDNRERQRERRAQETQQETTQHLIDQQEIEIRREGLKRHSKKQLNISEIKERDCGRRAQEKQQERTQRLRDQRERQRERRAQETGDERTERLDEQRDRDIRQRNARLTRRNLSADVGEMTSVYPQCRAYHFSRETTNFCCMKGKVIIAPLKTLPNALINLYTGDTPQAHEFRKDIRQYNCLFQLTSFGAKEVVAHGWNPSVIIQSQIHHFISSLMPDLDQQSKFLQIYFMDPQDSIEFE
SIO_010081: LOC116982970
subclass of: SO_0000673
so part of: LOC116982970
location: complement(join(7207867..7208335,7208536..7208826,7211638..7211720))
location: region:7207867-7211720:-1
so has part: feature:7211638-7211720:-1:exon
so has part: feature:7208536-7208826:-1:exon
so has part: feature:7207867-7208335:-1:exon

XP_032892394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7211638-7211720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7208536-7208826:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7207867-7208335:-1:exon

rpl13
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: rpl13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7281903..7289663)
location: region:7281903-7289663:-1
so has part: feature:7281903-7289663:-1:exon
subclass of: SO_0000010

116982445
type: Gene
SIO_000068: ncbigene

position:7281903:-1
position: 7281903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7289663:-1
position: 7289663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7281903-7289663:-1:exon

rpl13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: rpl13
product: ribosomal protein L13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_033035667.1
SIO_010081: rpl13
subclass of: SO_0000673
so part of: rpl13
location: complement(join(7281903..7282147,7282417..7282473,7284661..7284834,7285190..7285331,7287976..7288105,7289582..7289663))
location: region:7281903-7289663:-1
so has part: feature:7289582-7289663:-1:exon
so has part: feature:7287976-7288105:-1:exon
so has part: feature:7285190-7285331:-1:exon
so has part: feature:7284661-7284834:-1:exon
so has part: feature:7282417-7282473:-1:exon
so has part: feature:7281903-7282147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7289582-7289663:-1:exon

position:7289582:-1
position: 7289582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7287976-7288105:-1:exon

position:7287976:-1
position: 7287976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7288105:-1
position: 7288105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7285190-7285331:-1:exon

position:7285190:-1
position: 7285190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7285331:-1
position: 7285331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7284661-7284834:-1:exon

position:7284661:-1
position: 7284661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7284834:-1
position: 7284834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7282417-7282473:-1:exon

position:7282417:-1
position: 7282417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7282473:-1
position: 7282473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7281903-7282147:-1:exon

position:7282147:-1
position: 7282147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rpl13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: rpl13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L13
translation: MAPSRNGMILNPHFHKDWQRRVRTWFNQPARKNRRRKTRQAKARRIAPRPVAGPLRPVVRCPTVRYHTKVRAGRGFSLEELKTAGMNKRVARTIGIAVDNRRRNKSTESIQCNVQRLKEYRSKLIIFPRKASAPKKGDSTAEEIKVATQLTGAVMPIKNVYKKERARVISEDEKNFKAFASLRMARANARLFGIRAKRAKEAADQDIEKKK
SIO_010081: rpl13
subclass of: SO_0000673
so part of: rpl13
location: complement(join(7281989..7282147,7282417..7282473,7284661..7284834,7285190..7285331,7287976..7288079))
location: region:7281989-7288079:-1
so has part: feature:7287976-7288079:-1:exon
so has part: feature:7285190-7285331:-1:exon
so has part: feature:7284661-7284834:-1:exon
so has part: feature:7282417-7282473:-1:exon
so has part: feature:7281989-7282147:-1:exon

XP_032891558.1
type: Protein
SIO_000068: ncbiprotein

position:7281989:-1
position: 7281989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7288079:-1
position: 7288079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7287976-7288079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7285190-7285331:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7284661-7284834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7282417-7282473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7281989-7282147:-1:exon

LOC116983006
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116983006
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7282533..7282606)
location: region:7282533-7282606:-1
so has part: feature:7282533-7282606:-1:exon
subclass of: SO_0000578

116983006
type: Gene
SIO_000068: ncbigene

position:7282533:-1
position: 7282533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7282606:-1
position: 7282606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7282533-7282606:-1:exon

LOC116983006
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snoRNA
gene: LOC116983006
product: small nucleolar RNA MBII-202
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00324
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004414587.1
SIO_010081: LOC116983006
subclass of: SO_0000673
so part of: LOC116983006
location: complement(7282533..7282606)
location: region:7282533-7282606:-1
so has part: feature:7282533-7282606:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7282533-7282606:-1:exon

LOC116983005
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: LOC116983005
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7285950..7286024)
location: region:7285950-7286024:-1
so has part: feature:7285950-7286024:-1:exon
subclass of: SO_0000578

116983005
type: Gene
SIO_000068: ncbigene

position:7285950:-1
position: 7285950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7286024:-1
position: 7286024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7285950-7286024:-1:exon

LOC116983005
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 386614
nc RNA class: snoRNA
gene: LOC116983005
product: small nucleolar RNA MBII-202
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00324
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004414586.1
SIO_010081: LOC116983005
subclass of: SO_0000673
so part of: LOC116983005
location: complement(7285950..7286024)
location: region:7285950-7286024:-1
so has part: feature:7285950-7286024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7285950-7286024:-1:exon

spg7
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: spg7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7301336..7350584)
location: region:7301336-7350584:-1
so has part: feature:7301336-7350584:-1:exon
subclass of: SO_0000010

116982446
type: Gene
SIO_000068: ncbigene

position:7301336:-1
position: 7301336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7350584:-1
position: 7350584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7301336-7350584:-1:exon

spg7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: spg7
product: SPG7 matrix AAA peptidase subunit, paraplegin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033035668.1
SIO_010081: spg7
subclass of: SO_0000673
so part of: spg7
location: complement(join(7301336..7302667,7303347..7303654,7305918..7305995,7307376..7307539,7309079..7309235,7310105..7310220,7315288..7315398,7316561..7316663,7317579..7317703,7318298..7318471,7320857..7321019,7324217..7324342,7325435..7325537,7326601..7326740,7330795..7331036,7332809..7332898,7332983..7333085,7350322..7350584))
location: region:7301336-7350584:-1
so has part: feature:7350322-7350584:-1:exon
so has part: feature:7332983-7333085:-1:exon
so has part: feature:7332809-7332898:-1:exon
so has part: feature:7330795-7331036:-1:exon
so has part: feature:7326601-7326740:-1:exon
so has part: feature:7325435-7325537:-1:exon
so has part: feature:7324217-7324342:-1:exon
so has part: feature:7320857-7321019:-1:exon
so has part: feature:7318298-7318471:-1:exon
so has part: feature:7317579-7317703:-1:exon
so has part: feature:7316561-7316663:-1:exon
so has part: feature:7315288-7315398:-1:exon
so has part: feature:7310105-7310220:-1:exon
so has part: feature:7309079-7309235:-1:exon
so has part: feature:7307376-7307539:-1:exon
so has part: feature:7305918-7305995:-1:exon
so has part: feature:7303347-7303654:-1:exon
so has part: feature:7301336-7302667:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7350322-7350584:-1:exon

position:7350322:-1
position: 7350322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7332983-7333085:-1:exon

position:7332983:-1
position: 7332983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7333085:-1
position: 7333085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7332809-7332898:-1:exon

position:7332809:-1
position: 7332809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7332898:-1
position: 7332898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7330795-7331036:-1:exon

position:7330795:-1
position: 7330795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7331036:-1
position: 7331036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7326601-7326740:-1:exon

position:7326601:-1
position: 7326601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7326740:-1
position: 7326740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7325435-7325537:-1:exon

position:7325435:-1
position: 7325435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7325537:-1
position: 7325537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7324217-7324342:-1:exon

position:7324217:-1
position: 7324217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7324342:-1
position: 7324342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7320857-7321019:-1:exon

position:7320857:-1
position: 7320857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7321019:-1
position: 7321019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7318298-7318471:-1:exon

position:7318298:-1
position: 7318298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7318471:-1
position: 7318471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7317579-7317703:-1:exon

position:7317579:-1
position: 7317579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7317703:-1
position: 7317703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7316561-7316663:-1:exon

position:7316561:-1
position: 7316561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7316663:-1
position: 7316663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7315288-7315398:-1:exon

position:7315288:-1
position: 7315288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7315398:-1
position: 7315398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7310105-7310220:-1:exon

position:7310105:-1
position: 7310105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7310220:-1
position: 7310220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7309079-7309235:-1:exon

position:7309079:-1
position: 7309079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7309235:-1
position: 7309235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7307376-7307539:-1:exon

position:7307376:-1
position: 7307376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7307539:-1
position: 7307539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7305918-7305995:-1:exon

position:7305918:-1
position: 7305918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7305995:-1
position: 7305995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7303347-7303654:-1:exon

position:7303347:-1
position: 7303347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7303654:-1
position: 7303654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7301336-7302667:-1:exon

position:7302667:-1
position: 7302667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

spg7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 386614
gene: spg7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paraplegin
translation: MAAWLALQRQLGCVKNLPSVWPSCRRELFHHRPFCLKTVSPGGGSLKLGFVCRGCELKRLRYVSSSARHQSKDPIFKSFLSRPLTHHFEGFNRIQILKLLTQDPTKIWQFLGGIYHFSTSKSSRDQKPNEKSKGRSPEEDEEEKRRREREDQMYRERLRTLFIIAVIMSLLNSINSSGGNISWNDFVQEMLAKGEVARVQVVPESDIVEIYLHPGAVVFGRPRLALMYRMQVANIDKFEEKLRSVENELGIDGKDRIPVSYKRTGFFGNALYALGMAAVGVAILWYIFRLAGMAGRDGGFSAFNQLKMARFTIVDGKSGKGVSFKDVAGMHEAKLEVNEFVDYLKSPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQAPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKRRSNNMSGFANTEEEQTLNQLLVEMDGIGTTDHVIVLASTNRADILDNALMRPGRLDRHIFIDFPTLQERKEIFEQHLKGLKLSSQASFYSQRLAELTPGFSGADIANICNEAALHAAREGEKSVDTFNFEYAVEKVIAGTAKKSKILSKEERRIVAFHESGHVLVGWLLEHTDAVLKVSITPRTNAALGFTQILPQEQFLFTKEQLFERMCMALGGRVAEAITFNKVTTGAQDDLQKVTKVAYSMVKCYGMVEAIGHVSFPDTEEKGVMGRRPFSQGLQAHMDHEVNLLVARAYRHTEKLIMDNRDKLNKLANALVEREVLNYDDIETLIGPPPLGPKKRISPLSWIGAEKEKQDTGENEPPAKHLPDREINIHPI
SIO_010081: spg7
subclass of: SO_0000673
so part of: spg7
location: complement(join(7303454..7303654,7305918..7305995,7307376..7307539,7309079..7309235,7310105..7310220,7315288..7315398,7316561..7316663,7317579..7317703,7318298..7318471,7320857..7321019,7324217..7324342,7325435..7325537,7326601..7326740,7330795..7331036,7332809..7332898,7332983..7333085,7350322..7350552))
location: region:7303454-7350552:-1
so has part: feature:7350322-7350552:-1:exon
so has part: feature:7332983-7333085:-1:exon
so has part: feature:7332809-7332898:-1:exon
so has part: feature:7330795-7331036:-1:exon
so has part: feature:7326601-7326740:-1:exon
so has part: feature:7325435-7325537:-1:exon
so has part: feature:7324217-7324342:-1:exon
so has part: feature:7320857-7321019:-1:exon
so has part: feature:7318298-7318471:-1:exon
so has part: feature:7317579-7317703:-1:exon
so has part: feature:7316561-7316663:-1:exon
so has part: feature:7315288-7315398:-1:exon
so has part: feature:7310105-7310220:-1:exon
so has part: feature:7309079-7309235:-1:exon
so has part: feature:7307376-7307539:-1:exon
so has part: feature:7305918-7305995:-1:exon
so has part: feature:7303454-7303654:-1:exon

XP_032891559.1
type: Protein
SIO_000068: ncbiprotein

position:7303454:-1
position: 7303454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7350552:-1
position: 7350552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7350322-7350552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7332983-7333085:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7332809-7332898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7330795-7331036:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7326601-7326740:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7325435-7325537:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7324217-7324342:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7320857-7321019:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7318298-7318471:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7317579-7317703:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7316561-7316663:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7315288-7315398:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7310105-7310220:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7309079-7309235:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7307376-7307539:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7305918-7305995:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7303454-7303654:-1:exon

ankrd11
type: Gene
subclass of: SO_0000704
RO_0002162: 386614
gene: ankrd11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7360295..7526483
location: region:7360295-7526483:1
so has part: feature:7360295-7526483:1:exon
subclass of: SO_0000010

116982447
type: Gene
SIO_000068: ncbigene

position:7360295:1
position: 7360295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7526483:1
position: 7526483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7360295-7526483:1:exon

ankrd11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ankrd11
product: ankyrin repeat domain 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033035670.1
SIO_010081: ankrd11
subclass of: SO_0000673
so part of: ankrd11
location: join(7360295..7360696,7373018..7373170,7400818..7400889,7446565..7446708,7461120..7461261,7484222..7484380,7488779..7488979,7489879..7490021,7499002..7499149,7500425..7507044,7516294..7516392,7520273..7520416,7520846..7520941,7522606..7526483)
location: region:7360295-7526483:1
so has part: feature:7360295-7360696:1:exon
so has part: feature:7373018-7373170:1:exon
so has part: feature:7400818-7400889:1:exon
so has part: feature:7446565-7446708:1:exon
so has part: feature:7461120-7461261:1:exon
so has part: feature:7484222-7484380:1:exon
so has part: feature:7488779-7488979:1:exon
so has part: feature:7489879-7490021:1:exon
so has part: feature:7499002-7499149:1:exon
so has part: feature:7500425-7507044:1:exon
so has part: feature:7516294-7516392:1:exon
so has part: feature:7520273-7520416:1:exon
so has part: feature:7520846-7520941:1:exon
so has part: feature:7522606-7526483:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7360295-7360696:1:exon

position:7360696:1
position: 7360696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7373018-7373170:1:exon

position:7373018:1
position: 7373018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7373170:1
position: 7373170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7400818-7400889:1:exon

position:7400818:1
position: 7400818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7400889:1
position: 7400889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7446565-7446708:1:exon

position:7446565:1
position: 7446565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7446708:1
position: 7446708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7461120-7461261:1:exon

position:7461120:1
position: 7461120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7461261:1
position: 7461261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7484222-7484380:1:exon

position:7484222:1
position: 7484222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7484380:1
position: 7484380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7488779-7488979:1:exon

position:7488779:1
position: 7488779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7488979:1
position: 7488979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7489879-7490021:1:exon

position:7489879:1
position: 7489879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7490021:1
position: 7490021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7499002-7499149:1:exon

position:7499002:1
position: 7499002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7499149:1
position: 7499149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7500425-7507044:1:exon

position:7500425:1
position: 7500425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7507044:1
position: 7507044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7516294-7516392:1:exon

position:7516294:1
position: 7516294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7516392:1
position: 7516392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7520273-7520416:1:exon

position:7520273:1
position: 7520273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7520416:1
position: 7520416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7520846-7520941:1:exon

position:7520846:1
position: 7520846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7520941:1
position: 7520941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7522606-7526483:1:exon

position:7522606:1
position: 7522606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ankrd11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ankrd11
product: ankyrin repeat domain 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033035669.1
SIO_010081: ankrd11
subclass of: SO_0000673
so part of: ankrd11
location: join(7360295..7360696,7400818..7400889,7446565..7446708,7461120..7461261,7484222..7484380,7488779..7488979,7489879..7490021,7499002..7499149,7500425..7507044,7516294..7516392,7520273..7520416,7520846..7520941,7522606..7526483)
location: region:7360295-7526483:1
so has part: feature:7360295-7360696:1:exon
so has part: feature:7400818-7400889:1:exon
so has part: feature:7446565-7446708:1:exon
so has part: feature:7461120-7461261:1:exon
so has part: feature:7484222-7484380:1:exon
so has part: feature:7488779-7488979:1:exon
so has part: feature:7489879-7490021:1:exon
so has part: feature:7499002-7499149:1:exon
so has part: feature:7500425-7507044:1:exon
so has part: feature:7516294-7516392:1:exon
so has part: feature:7520273-7520416:1:exon
so has part: feature:7520846-7520941:1:exon
so has part: feature:7522606-7526483:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7360295-7360696:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7400818-7400889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7446565-7446708:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7461120-7461261:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7484222-7484380:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7488779-7488979:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7489879-7490021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7499002-7499149:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7500425-7507044:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7516294-7516392:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7520273-7520416:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7520846-7520941:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7522606-7526483:1:exon

ankrd11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 386614
gene: ankrd11
product: ankyrin repeat domain 11, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033035672.1
SIO_010081: ankrd11
subclass of: SO_0000673
so part of: ankrd11
location: join(7360295..7360696,7400818..7400889,7446565..7446708,7461120..7461261,7484222..7484380,7488779..7488979,7489879..7490021,7499002..7499149,7500434..7507044,7516294..7516392,7520273..7520416,7520846..7520941,7522606..7526483)
location: region:7360295-7526483:1
so has part: feature:7360295-7360696:1:exon
so has part: feature:7400818-7400889:1:exon
so has part: feature:7446565-7446708:1:exon
so has part: feature:7461120-7461261:1:exon
so has part: feature:7484222-7484380:1:exon
so has part: feature:7488779-7488979:1:exon
so has part: feature:7489879-7490021:1:exon
so has part: feature:7499002-7499149:1:exon
so has part: feature:7500434-7507044:1:exon
so has part: feature:7516294-7516392:1:exon
so has part: feature:7520273-7520416:1:exon
so has part: feature:7520846-7520941:1:exon
so has part: feature:7522606-7526483:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7360295-7360696:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7400818-7400889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7446565-7446708:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7461120-7461261:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7484222-7484380:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7488779-7488979:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7489879-7490021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7499002-7499149:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7500434-7507044:1:exon